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Sample records for fast surface based

  1. Fast surface design based on sketched networks

    NASA Astrophysics Data System (ADS)

    van Dijk, Casper G. C.

    1992-11-01

    Computer aided design of freeformed surfaces is strongly biased towards input and optimization of surfaces. Input modules are based on digitizing drawings or placing and manipulating spline control vertices. Design, especially during the idea generation (or conceptual) design phase, is poorly supported. We present a system based on direct manipulation of shaded images of the surfaces. The designer sketches profiles on a tablet. The profiles are positioned in object space with a spaceball (6D joystick). A network of crossing curves is built interactively. The system constructs patches over this network in realtime. The designer can correct a profile by sketching. The affected surfaces are updated immediately. Patches are defined by the curves and estimated cross-boundary derivatives. They connect with G1 continuity. Our prototype surface modeler avoids the need for exact dimensions and precise coordinates, as seen in traditional systems. Instead, it supports fast, intuitive generation and evaluation of surfaces. We discuss a comparison with other systems regarding the time needed to model shapes, and some opinions of professional industrial designers.

  2. A Fast Terahertz Spectrometer Based on Frequency Selective Surface Filters

    NASA Astrophysics Data System (ADS)

    Carelli, P.; Chiarello, F.; Cibella, S.; Di Gaspare, A.; Leoni, R.; Ortolani, M.; Torrioli, G.

    2012-05-01

    We present a fast spectrometer working in the 0.7-4.8 THz range. Broadband radiation from a blackbody source is focused first on a rotating silicon wafer, whose surface was patterned with 18 metal band-pass filters, then on the sample under test and finally is detected by a superconducting microbolometer with microsecond time constant. The bolometer sensor is coupled to a spiral antenna whose frequency band matches the spectral range of the filters. The spectral resolution is set by the filters quality factor of about 3. A dynamic range of 100 and a S/N ratio of 20 are achieved by integrating for less than 10 second. The detector can operate up to 6 K in a closed-cycle cooler, hence making the present apparatus suitable for building up a simple terahertz video-rate spectrometer.

  3. Metadyn View: Fast web-based viewer of free energy surfaces calculated by metadynamics

    NASA Astrophysics Data System (ADS)

    Hošek, Petr; Spiwok, Vojtěch

    2016-01-01

    Metadynamics is a highly successful enhanced sampling technique for simulation of molecular processes and prediction of their free energy surfaces. An in-depth analysis of data obtained by this method is as important as the simulation itself. Although there are several tools to compute free energy surfaces from metadynamics data, they usually lack user friendliness and a build-in visualization part. Here we introduce Metadyn View as a fast and user friendly viewer of bias potential/free energy surfaces calculated by metadynamics in Plumed package. It is based on modern web technologies including HTML5, JavaScript and Cascade Style Sheets (CSS). It can be used by visiting the web site and uploading a HILLS file. It calculates the bias potential/free energy surface on the client-side, so it can run online or offline without necessity to install additional web engines. Moreover, it includes tools for measurement of free energies and free energy differences and data/image export.

  4. Fast Disinfecting Antimicrobial Surfaces

    PubMed Central

    Madkour, Ahmad E.; Dabkowski, Jeffery M.; Nüsslein, Klaus; Tew, Gregory N.

    2013-01-01

    Silicon wafers and glass surfaces were functionalized with facially amphiphilic antimicrobial copolymers using the “grafting from” technique. Surface initiated atom transfer radical polymerization (ATRP) was used to grow poly(butylmethacrylate)-co-poly(Boc-aminoethyl methacrylate) from the surfaces. Upon Boc-deprotection, these surfaces became highly antimicrobial and killed S. aureus and E. coli 100% in less than 5 min. The molecular weight and grafting density of the polymer were controlled by varying the polymerization time and initiator surface density. Antimicrobial studies showed that the killing efficiency of these surfaces was independent of polymer layer thickness or grafting density within the range of surfaces studied. PMID:19177651

  5. Fast time-of-flight camera based surface registration for radiotherapy patient positioning

    SciTech Connect

    Placht, Simon; Stancanello, Joseph; Schaller, Christian; Balda, Michael; Angelopoulou, Elli

    2012-01-15

    Purpose: This work introduces a rigid registration framework for patient positioning in radiotherapy, based on real-time surface acquisition by a time-of-flight (ToF) camera. Dynamic properties of the system are also investigated for future gating/tracking strategies. Methods: A novel preregistration algorithm, based on translation and rotation-invariant features representing surface structures, was developed. Using these features, corresponding three-dimensional points were computed in order to determine initial registration parameters. These parameters became a robust input to an accelerated version of the iterative closest point (ICP) algorithm for the fine-tuning of the registration result. Distance calibration and Kalman filtering were used to compensate for ToF-camera dependent noise. Additionally, the advantage of using the feature based preregistration over an ''ICP only'' strategy was evaluated, as well as the robustness of the rigid-transformation-based method to deformation. Results: The proposed surface registration method was validated using phantom data. A mean target registration error (TRE) for translations and rotations of 1.62 {+-} 1.08 mm and 0.07 deg. {+-} 0.05 deg., respectively, was achieved. There was a temporal delay of about 65 ms in the registration output, which can be seen as negligible considering the dynamics of biological systems. Feature based preregistration allowed for accurate and robust registrations even at very large initial displacements. Deformations affected the accuracy of the results, necessitating particular care in cases of deformed surfaces. Conclusions: The proposed solution is able to solve surface registration problems with an accuracy suitable for radiotherapy cases where external surfaces offer primary or complementary information to patient positioning. The system shows promising dynamic properties for its use in gating/tracking applications. The overall system is competitive with commonly-used surface

  6. Development of a compact low coherence interferometer based on GPGPU for fast microscopic surface measurement on turbine blades

    NASA Astrophysics Data System (ADS)

    Li, Yinan; Kästner, Markus; Reithmeier, Eduard

    2015-05-01

    Vertical scanning interferometry (VSI) techniques are widely used to profile microscopic surface structures of industrial products. This paper introduces a high-precision fast optical measurement system with an optimized small sensor head for the measurement of precision surfaces on a turbine blade or blisks (blade integrated discs). The non-contact measurement system is based on a low coherence interferometer (LCI), which is capable of fast profiling of 3D sample surface with a nanometer resolution and has a larger measurement range compared to conventional microscopes. This results in a large amount of sampled data and a high computational time for the evaluation of the data. For this reason, the used evaluation algorithm in this paper is accelerated by the Compute Unified Device Architecture (CUDA) technology, which allows parallel evaluation of the data stack on independent cores of a General Purpose Graphics Processing Unit (GPGPU). As a result, the GPU-based optimized algorithm is compared with the original CPU-based single-threaded algorithm to show the approximate 60x speedup of computing the Hilbert Transformation, which is used to find the depth position in the correlogram of each pixel of the sampled data. The main advantage of the GPU computing for the evaluation algorithm of the LCI is that it can reduce the time-consuming data evaluation process and further accelerates the whole measurement.

  7. Surface retrievals from Hyperion EO1 using a new, fast, 1D-Var based retrieval code

    NASA Astrophysics Data System (ADS)

    Thelen, Jean-Claude; Havemann, Stephan; Wong, Gerald

    2015-05-01

    We have developed a new algorithm for the simultaneous retrieval of the atmospheric profiles (temperature, humidity, ozone and aerosol) and the surface reflectance from hyperspectral radiance measurements obtained from air/space-borne, hyperspectral imagers such as Hyperion EO-1. The new scheme, proposed here, consists of a fast radiative transfer code, based on empirical orthogonal functions (EOFs), in conjunction with a 1D-Var retrieval scheme. The inclusion of an 'exact' scattering code based on spherical harmonics, allows for an accurate treatment of Rayleigh scattering and scattering by aerosols, water droplets and ice-crystals, thus making it possible to also retrieve cloud and aerosol optical properties, although here we will concentrate on non-cloudy scenes. We successfully tested this new approach using hyperspectral images taken by Hyperion EO-1, an experimental pushbroom imaging spectrometer operated by NASA.

  8. Manybeam velocimeter for fast surfaces

    SciTech Connect

    Goosman, D.; Avara, G.; Steinmetz, L.; Lai, C.; Perry, S.

    1996-09-01

    For the past 5 years, we have conceived, built and successfully used a new 10 beam laser velocimeter for monitoring velocity vs time histories of fast moving surfaces, and will have a 20 beam capability soon. We conceived a method to multiplex 5 to 10 beams through a single Fabry-Perot interferometer, without losing any light that our equivalently-performing single beam system could use, and with negligible cross- talk. This saves the cost of 16 interferometers, simplifies operation and takes less space than without multiplexing. We devised special efficient light collecting probes, streak cameras that change sweep speed during the course of the record, and a new double cavity interferometer which is better, cheaper and more flexible than our previous versions. With the 10 recorders, we conceived and employ a method of using both a fast and a slow streak camera on each of 5 beams without reducing the light that is available to either camera separately. Five new galvanometrically-driven triggerable CCD streak cameras will be installed soon.

  9. A fast 3D surface reconstruction and volume estimation method for grain storage based on priori model

    NASA Astrophysics Data System (ADS)

    Liang, Xian-hua; Sun, Wei-dong

    2011-06-01

    Inventory checking is one of the most significant parts for grain reserves, and plays a very important role on the macro-control of food and food security. Simple, fast and accurate method to obtain internal structure information and further to estimate the volume of the grain storage is needed. Here in our developed system, a special designed multi-site laser scanning system is used to acquire the range data clouds of the internal structure of the grain storage. However, due to the seriously uneven distribution of the range data, this data should firstly be preprocessed by an adaptive re-sampling method to reduce the data redundancy as well as noise. Then the range data is segmented and useful features, such as plane and cylinder information, are extracted. With these features a coarse registration between all of these single-site range data is done, and then an Iterative Closest Point (ICP) algorithm is carried out to achieve fine registration. Taking advantage of the structure of the grain storage being well defined and the types of them are limited, a fast automatic registration method based on the priori model is proposed to register the multi-sites range data more efficiently. Then after the integration of the multi-sites range data, the grain surface is finally reconstructed by a delaunay based algorithm and the grain volume is estimated by a numerical integration method. This proposed new method has been applied to two common types of grain storage, and experimental results shown this method is more effective and accurate, and it can also avoids the cumulative effect of errors when registering the overlapped area pair-wisely.

  10. Fast evaluation of surface sensitivity on ghost

    NASA Astrophysics Data System (ADS)

    Boehme, Beate

    2015-09-01

    Real optical systems are often suffering from false light caused by ghosts. In particular single reflections are critical in applications like reflected light illumination microscopy or confocal systems. The degradations of performance can be bright spots in the image or contrast, signal to noise or dynamic range reduction. Thus in these systems the suppression of first order reflections is important. State of the art optical design software supports ray trace based ghost image analysis. The automatic generation of reflex light paths is provided, but for systems with a large number of surfaces the analysis of all ghost light paths is time-consuming. Conventional Monte Carlo based non sequential ray trace sums up the reflections of all surfaces simultaneously. To achieve high accuracy a huge number of rays is necessary, what results in long computational time, especially if the distinction of surface influences needs multiple calculations. In this paper a fast method is proposed for the ranking of ghosts. It was developed for single reflections in centered optical systems. For each surface the ghost light path is calculated with paraxial and real ray trace. The ghost diameter and the corresponding illumination NA are calculated. Usually the distance of the reflex focus to the image is used as criterion to access the importance of a ghost. Here we use the power of the ghost ray bundle. It is compared with the signal strength and listed for all surfaces generating a ghost. So in one step a surface contribution of reflex powers as well as an estimation of total flux of reflected light is obtained. Due to the fact, that only a few rays have to be calculated, the method is rather fast. The accuracy can be estimated by comparison of paraxial and marginal ray trace. In the proposed method, some assumptions and approximations are made. They are assessed in respect to some practical examples, and by comparison with full brute force non-sequential ray trace. The usefulness of

  11. Fast liquid transfer between two surfaces

    NASA Astrophysics Data System (ADS)

    Chen, Huanchen; Tang, Tian; Amirfazli, Alidad

    2014-11-01

    Liquid transfer process between two surfaces typically ends by breaking of a stretched liquid bridge. The amount of liquid remaining on each of the surfaces relative to total volume is usually of interest in applications (e.g. offset or electronic printing, wet adhesion systems, etc.). Literature shows that depending on stretching velocity, U, surface wettability and liquid properties, the behaviour of the liquid bridge can be categorized into: quasi-static where the surface force dominates and dynamic where contributions from viscous and inertia forces are not negligible. Through a systematic experimental study, we demonstrate for the first time that the division of liquid between surfaces in the quasi-static regime is a constant which depends on the receding contact angles. In the dynamic regime (fast transfer), liquid division takes a complicated form. An analytical-empirical model is developed and verified by experimental results that can predict splitting of the liquid between two surfaces as a function of U, surface wettability and liquid viscosity. The model also successfully predicts an even split between surfaces at extremely high velocities as it was observed by us and others.

  12. Effects of surface wettability on fast liquid transfer

    NASA Astrophysics Data System (ADS)

    Chen, H.; Tang, T.; Amirfazli, A.

    2015-11-01

    A systematic experimental study was performed to understand the role of surface contact angles in affecting the process of fast liquid transfer. Surfaces with different wettabilities were used, and the transfer ratio (α, the amount of liquid transferred to the acceptor surface over the total amount of liquid) was measured for each pair of surfaces. A numerical model based on the volume of fluid method was developed to help understand the experimental results. The surface wettability was shown to significantly affect the boundaries between three regimes based on stretching speeds: quasi-static (surface force dominated), transition (surface/viscous/inertia forces all important) and dynamic (viscous/inertia forces dominated). Specifically, the values of the boundary speeds were found to increase with |α0 - 0.5|, where α0 is the transfer ratio in the quasi-static regime, and α0 is governed by the surface receding contact angles. Based on our results, an empirical equation to describe the transfer ratio as function of stretching speed was proposed. This equation can also be used as a prediction tool for the value of α for a fast transfer system.

  13. Surface track potential created by fast protons at LiF surfaces

    NASA Astrophysics Data System (ADS)

    Arnau, A.; Gravielle, M. S.; Miraglia, J. E.; Ponce, V. H.

    2003-06-01

    A model based on atomic ionization of F- sites at the surface is used to calculate the surface track potential created by fast protons at LiF surfaces. For 100-keV protons at grazing incidence, we find that the track potential close to the surface plays a significant role in determining the shift to lower energies of the convoy electron peak with respect to the unperturbed cusp value.

  14. Inversion of surface parameters using fast learning neural networks

    NASA Technical Reports Server (NTRS)

    Dawson, M. S.; Olvera, J.; Fung, A. K.; Manry, M. T.

    1992-01-01

    A neural network approach to the inversion of surface scattering parameters is presented. Simulated data sets based on a surface scattering model are used so that the data may be viewed as taken from a completely known randomly rough surface. The fast learning (FL) neural network and a multilayer perceptron (MLP) trained with backpropagation learning (BP network) are tested on the simulated backscattering data. The RMS error of training the FL network is found to be less than one half the error of the BP network while requiring one to two orders of magnitude less CPU time. When applied to inversion of parameters from a statistically rough surface, the FL method is successful at recovering the surface permittivity, the surface correlation length, and the RMS surface height in less time and with less error than the BP network. Further applications of the FL neural network to the inversion of parameters from backscatter measurements of an inhomogeneous layer above a half space are shown.

  15. Using compute unified device architecture-enabled graphic processing unit to accelerate fast Fourier transform-based regression Kriging interpolation on a MODIS land surface temperature image

    NASA Astrophysics Data System (ADS)

    Hu, Hongda; Shu, Hong; Hu, Zhiyong; Xu, Jianhui

    2016-04-01

    Kriging interpolation provides the best linear unbiased estimation for unobserved locations, but its heavy computation limits the manageable problem size in practice. To address this issue, an efficient interpolation procedure incorporating the fast Fourier transform (FFT) was developed. Extending this efficient approach, we propose an FFT-based parallel algorithm to accelerate regression Kriging interpolation on an NVIDIA® compute unified device architecture (CUDA)-enabled graphic processing unit (GPU). A high-performance cuFFT library in the CUDA toolkit was introduced to execute computation-intensive FFTs on the GPU, and three time-consuming processes were redesigned as kernel functions and executed on the CUDA cores. A MODIS land surface temperature 8-day image tile at a resolution of 1 km was resampled to create experimental datasets at eight different output resolutions. These datasets were used as the interpolation grids with different sizes in a comparative experiment. Experimental results show that speedup of the FFT-based regression Kriging interpolation accelerated by GPU can exceed 1000 when processing datasets with large grid sizes, as compared to the traditional Kriging interpolation running on the CPU. These results demonstrate that the combination of FFT methods and GPU-based parallel computing techniques greatly improves the computational performance without loss of precision.

  16. Study of surface energy budget and test of a newly developed fast photoacoustic spectroscopy based hygrometer in field campaign Szeged (Hungary)

    NASA Astrophysics Data System (ADS)

    Tatrai, David; Nikov, Daniella; Zsolt Jász, Ervin; Bozóki, Zoltán; Szabó, Gábor; Weidinger, Tamás; András Gyöngyösi, Zénó; Kiss, Melinda; Józsa, János; Simó Diego, Gemma; Cuxart Rodamilans, Joan; Wrenger, Burkhart; Bottyán, Zsolt

    2014-05-01

    A micrometeorological field measurement campaign dedicated to study the surface energy budget and the structure of the boundary layer focusing on the transient layer forming periods during night-time was organized in the period of 10th of November to 3rd of December 2013 in the nearby of Szeged, Hungary. A temporary micrometeorological measurement station was set up at the coordinates N:46.239943; E:20.089758, approximately 1700 m far from a national meteorology station (N:46.255711; E:20.09052). In the experimental micrometeorological site different types of instruments were installed to measure numerous parameters: standard meteorological measurements (p, T, wet, wind speed and direction at three different levels, relative humidity at two levels and absolute humidity at one level) radiation budget components surface temperature and leaf wetness soil temperature, moisture and heat flux into the deeper soil layer eddy-covariance measurements (t, H, LE CO2) at 3 m level using Campbell open-path IRGA (EC150) system. At the national meteorology station (http://adatok.geo.u-szeged.hu/?lang=eng) besides their standard measurement equipment and measurement routine a SODAR was installed and continuously operated. These ground based measurements were combined with and supported by UAV, quadcopter and tethered balloon based vertical profile measurements of p, T, rh. For this measurement campaign as a modification of a previously developed airborne ready dual channel hygrometer, a fast photoacoustic spectroscopy based hygrometer was developed for absolute humidity measurements. The estimated response time of the system is faster than 15 Hz, which was achieved by the replacement of the data acquisition system and by recording the raw photoacoustic signal sampled at rate of 48 kHz for post-processing. During the campaign this new system was compared to a TDL system commercially available at Li-COR Inc. Besides the testing of the newly developed fast photoacoustic hygrometer

  17. Fast and Efficient Approach in Surface Wave Analysis

    NASA Astrophysics Data System (ADS)

    Kanli, A. I.

    2010-12-01

    Fast and Efficient Approach in Surface Wave Analysis Ali Ismet KANLI Istanbul University, Engineering Faculty, Department of Geophysical Engineering, 34320, Avcilar Campus, Istanbul-Turkey, E-mail: kanli@istanbul.edu.tr Abstract: A two-step surface wave analysis method is proposed including both the MASW (Multi-channel Analysis of Surface Waves) and Micro-tremor based techniques. This is an integrated approach and the MASW survey data are gathered to obtain the shear wave velocity-depth information up to at least 30 meters by using a special type active seismic source called as SR-II or Kangaroo. In the second step, the microtremor data which are based on surface waves from seismic noise at each site are used to determine the shear-wave velocity-depth profiles. In the second step of the process, the multichannel analysis of surface waves data are given as constraints in the microtremor inversion process. This proposed algorithm allows us to calculate shear wave velocity-depth information with all geotechnical parameters from near surface to bedrock depths very fast and efficiently.

  18. Structure of ultrathin oxide layers on metal surfaces from grazing scattering of fast atoms

    NASA Astrophysics Data System (ADS)

    Winter, H.; Seifert, J.; Blauth, D.; Busch, M.; Schüller, A.; Wethekam, S.

    2009-10-01

    The structure of ultrathin oxide layers grown on metal substrates is investigated by grazing scattering of fast atoms from the film surface. We present three recent experimental techniques which allow us to study the structure of ordered oxide films on metal substrates in detail. (1) A new variant of a triangulation method with fast atoms based on the detection of emitted electrons, (2) rainbow scattering under axial surface channeling conditions, and (3) fast atom diffraction (FAD) for studies on the structure of oxide films. Our examples demonstrate the attractive features of grazing fast atom scattering as a powerful analytical tool in surface physics.

  19. Noninterferometric topography measurements of fast moving surfaces.

    PubMed

    Pinhasi, Shirly Vinikman; Eliezer, Shalom; Glam, Benny; Appelbaum, Gabi; Bakshi, Lior

    2011-08-01

    The topography of moving surfaces is recovered by noninterferometric measurements. The phase reconstruction is derived by measuring the intensities of a backscattered pulsed laser light and solving the transport intensity equation (TIE). The TIE is solved by expanding the phase into a series of Zernike polynomials, leading to a set of appropriate algebraic equations. This technique, which enables us to make a direct connection between experiments and the TIE, has been successfully tested in gas gun experiments. In particular, the topographies of a moving projectile and the free surface of a shocked target were recovered. PMID:21811317

  20. Spherical Demons: Fast Diffeomorphic Landmark-Free Surface Registration

    PubMed Central

    Yeo, B.T. Thomas; Sabuncu, Mert R.; Vercauteren, Tom; Ayache, Nicholas; Fischl, Bruce; Golland, Polina

    2010-01-01

    We present the Spherical Demons algorithm for registering two spherical images. By exploiting spherical vector spline interpolation theory, we show that a large class of regularizors for the modified Demons objective function can be efficiently approximated on the sphere using iterative smoothing. Based on one parameter subgroups of diffeomorphisms, the resulting registration is diffeomorphic and fast. The Spherical Demons algorithm can also be modified to register a given spherical image to a probabilistic atlas. We demonstrate two variants of the algorithm corresponding to warping the atlas or warping the subject. Registration of a cortical surface mesh to an atlas mesh, both with more than 160k nodes requires less than 5 minutes when warping the atlas and less than 3 minutes when warping the subject on a Xeon 3.2GHz single processor machine. This is comparable to the fastest non-diffeomorphic landmark-free surface registration algorithms. Furthermore, the accuracy of our method compares favorably to the popular FreeSurfer registration algorithm. We validate the technique in two different applications that use registration to transfer segmentation labels onto a new image: (1) parcellation of in-vivo cortical surfaces and (2) Brodmann area localization in ex-vivo cortical surfaces. PMID:19709963

  1. Toward food analytics: fast estimation of lycopene and β-carotene content in tomatoes based on surface enhanced Raman spectroscopy (SERS).

    PubMed

    Radu, Andreea Ioana; Ryabchykov, Oleg; Bocklitz, Thomas Wilhelm; Huebner, Uwe; Weber, Karina; Cialla-May, Dana; Popp, Jürgen

    2016-07-21

    Carotenoids are molecules that play important roles in both plant development and in the well-being of mammalian organisms. Therefore, various studies have been performed to characterize carotenoids' properties, distribution in nature and their health benefits upon ingestion. Nevertheless, there is a gap regarding a fast detection of them at the plant phase. Within this contribution we report the results obtained regarding the application of surface enhanced Raman spectroscopy (SERS) toward the differentiation of two carotenoid molecules (namely, lycopene and β-carotene) in tomato samples. To this end, an e-beam lithography (EBL) SERS-active substrate and a 488 nm excitation source were employed, and a relevant simulated matrix was prepared (by mixing the two carotenoids in defined percentages) and measured. Next, carotenoids were extracted from tomato plants and measured as well. Finally, a combination of principal component analysis and partial least squares regression (PCA-PLSR) was applied to process the data, and the obtained results were compared with HPLC measurements of the same extracts. A good agreement was obtained between the HPLC and the SERS results for most of the tomato samples. PMID:27200439

  2. Fast Simulation of 3-D Surface Flanging and Prediction of the Flanging Lines Based On One-Step Inverse Forming Algorithm

    SciTech Connect

    Bao Yidong; Hu Sibo; Lang Zhikui; Hu Ping

    2005-08-05

    A fast simulation scheme for 3D curved binder flanging and blank shape prediction of sheet metal based on one-step inverse finite element method is proposed, in which the total plasticity theory and proportional loading assumption are used. The scheme can be actually used to simulate 3D flanging with complex curve binder shape, and suitable for simulating any type of flanging model by numerically determining the flanging height and flanging lines. Compared with other methods such as analytic algorithm and blank sheet-cut return method, the prominent advantage of the present scheme is that it can directly predict the location of the 3D flanging lines when simulating the flanging process. Therefore, the prediction time of flanging lines will be obviously decreased. Two typical 3D curve binder flanging including stretch and shrink characters are simulated in the same time by using the present scheme and incremental FE non-inverse algorithm based on incremental plasticity theory, which show the validity and high efficiency of the present scheme.

  3. Red surface emitters: powerful and fast

    NASA Astrophysics Data System (ADS)

    Schweizer, Heinz; Ballmann, Tabitha; Butendeich, Rainer; Rossbach, Robert; Raabe, Bernd; Jetter, Michael; Scholz, Ferdinand

    2003-12-01

    Vertical cavity surface emitting lasers (VCSEL) in the GaInP/AlGaInP material system have experienced a rapid development in their short history. In general lasers from that material system are suitable for a huge number of applications beginning with TV lasers and high power lasers for edge emitters, continuing with optical data storage, medical applications as well as data communication in cars, air planes, offices and between computers as application field for VCSELs. Especially automotive applications show the highest requirements on a laser with respect to operation temperature and power. In this talk we draw out the problems of the material system AlGaInP and its implications for laser applications. We discuss the epitaxial and technological solutions to overcome at least a part of these inherent problems. We will discuss the possible power that we can expect from VCSELs emitting in the range between 650 nm to 670 nm. We got from our lasers 5 mW, CW @ RT, 670nm and 2.5mW, CW@RT, 650 nm. We emphasize the role of doping, Bragg mirror grading, suitable detuning of cavity mode and gain, and optimisation of the contact layer and control of the oxide aperture in the VCSEL structure to get improved operation characteristics at higher temperatures. From the analysis of high frequency measurements, we could evaluate modulation bandwidths between 4 GHz and 10 GHz. The application of polyimide as a dielectric isolation material shows the potential to obtain modulation bandwidths beyond 10 GHz. For the intrinsic modulation bandwidth we get a value of 25 GHz, which is near the value edge emitters show. A more detailed discussion on photon lifetimes and carrier transport times will be given in the talk. Red light emitting VCSELS driven with short current pulses showed laser emission up to + 160°C case temperature. Thus, a CW operation up to +120°C can be expected after further improvement of power generation (decrease of series resistance) and heat spreading (optimized

  4. Fast response and low power consumption 1×2 thermo-optic switch based on dielectric-loaded surface plasmon polariton waveguides

    NASA Astrophysics Data System (ADS)

    Qi, Zhipeng; Hu, Guohua; Yun, Binfeng; Zhang, Xiong; Cui, Yiping

    2016-08-01

    In this paper, we present a 1 × 2 thermo-optic (TO) switch based on the integration of the dielectric-loaded surface plasmon polariton (SPP) waveguides with the silicon nanowires. Liquid-curable fluorinated resin (LFR) made of perfluorinated polymer was adopted as the ridge, which has a TO coefficient twice more than that of polymethyl methacrylate, leading to a significant decrease in the power consumption. It was shown that the response time of the dielectric-loaded SPP waveguide could be improved through optimizing the dimensions of the LFR polymer ridge without loss of relative high figure of merit and large confinement factor. Performance characteristics of such a 1 × 2 TO switch operating at a telecom wavelength of 1550 nm was investigated theoretically from the analysis of both heat and optical fields. The results reveal that a switching power as low as 7 mW and an extremely short switching time (with rise time of 3 μs and fall time of 6.7 μs) could be achieved with the proposed dielectric-loaded SPP-based 1 × 2 TO switch. In addition, the crosstalk could be enhanced to at least 40 dB with the applied power of 7 mW at the wavelength of 1550 nm, and it could be retained to be above 20 dB in the wavelength spectrum of 1500-1600 nm during the on/off state.

  5. A fast and efficient adaptive parallel ray tracing based model for thermally coupled surface radiation in casting and heat treatment processes

    NASA Astrophysics Data System (ADS)

    Fainberg, J.; Schaefer, W.

    2015-06-01

    A new algorithm for heat exchange between thermally coupled diffusely radiating interfaces is presented, which can be applied for closed and half open transparent radiating cavities. Interfaces between opaque and transparent materials are automatically detected and subdivided into elementary radiation surfaces named tiles. Contrary to the classical view factor method, the fixed unit sphere area subdivision oriented along the normal tile direction is projected onto the surrounding radiation mesh and not vice versa. Then, the total incident radiating flux of the receiver is approximated as a direct sum of radiation intensities of representative “senders” with the same weight factor. A hierarchical scheme for the space angle subdivision is selected in order to minimize the total memory and the computational demands during thermal calculations. Direct visibility is tested by means of a voxel-based ray tracing method accelerated by means of the anisotropic Chebyshev distance method, which reuses the computational grid as a Chebyshev one. The ray tracing algorithm is fully parallelized using MPI and takes advantage of the balanced distribution of all available tiles among all CPU's. This approach allows tracing of each particular ray without any communication. The algorithm has been implemented in a commercial casting process simulation software. The accuracy and computational performance of the new radiation model for heat treatment, investment and ingot casting applications is illustrated using industrial examples.

  6. Hyper fast radiative transfer for the physical retrieval of surface parameters from SEVIRI observations

    NASA Astrophysics Data System (ADS)

    Liuzzi, G.; Masiello, G.; Serio, C.; Blasi, M. G.; Venafra, S.

    2015-09-01

    This paper describes the theoretical aspects of a fast scheme for the physical retrieval of surface temperature and emissivity from SEVIRI data, their implementation and some sample results obtained. The scheme is based on a Kalman Filter approach, which effectively exploits the temporal continuity in the observations of the geostationary Meteosat Second Generation (MSG) platform, on which SEVIRI (Spinning Enhanced Visible and InfraRed Imager) operates. Such scheme embodies in its core a physical retrieval algorithm, which employs an hyper fast radiative transfer code highly customized for this retrieval task. Radiative transfer and its customizations are described in detail. Fastness, accuracy and stability of the code are fully documented for a variety of surface features, showing a peculiar application to the massive Greek forest fires in August 2007.

  7. Dds-Based Fast Scan Spectrometer

    NASA Astrophysics Data System (ADS)

    Alekseev, E. A.; Motiyenko, R. A.; Margulès, L.

    2010-06-01

    The technique of direct digital synthesis (DDS) has two important features which enable its application in microwave spectroscopy: micro-Hz tuning resolution and extremely fast frequency switching with continuous phase. We have applied a direct digital synthesizer in a PLL-spectrometer based on backward-wave oscillator (BWO). As result we have obtained an instrument that can cover a 100 GHz bandwidth in less than one hour with high spectral resolution and high precision of frequency measurement. The application of the spectrometer to sub-millimeter wave survey spectra records of several isotopic species of astrophysical molecules (methanol, formamide, methyl formate, aziridine) will be discussed. The support of Université de Lille 1 and le Programme National de Physique Chimie du Milieu Interstellaire is gratefully acknowledged.

  8. Surface Plasmon Based Spectrometer

    NASA Astrophysics Data System (ADS)

    Wig, Andrew; Passian, Ali; Boudreaux, Philip; Ferrell, Tom

    2008-03-01

    A spectrometer that uses surface plasmon excitation in thin metal films to separate light into its component wavelengths is described. The use of surface plasmons as a dispersive medium sets this spectrometer apart from prism, grating, and interference based variants and allows for the miniaturization of this device. Theoretical and experimental results are presented for two different operation models. In the first case surface plasmon tunneling in the near field is used to provide transmission spectra of different broad band-pass, glass filters across the visible wavelength range with high stray-light rejection at low resolution as well as absorption spectra of chlorophyll extracted from a spinach leaf. The second model looks at the far field components of surface plasmon scattering.

  9. Fast and Slow Wetting Dynamics on nanostructured surfaces

    NASA Astrophysics Data System (ADS)

    Nandyala, Dhiraj; Rahmani, Amir; Cubaud, Thomas; Colosqui, Carlos

    2015-11-01

    This talk will present force-displacement and spontaneous drop spreading measurements on diverse nanostructured surfaces (e.g., mesoporous titania thin films, nanoscale pillared structures, on silica or glass substrates). Experimental measurements are performed for water-air and water-oil systems. The dynamics of wetting observed in these experiments can present remarkable crossovers from fast to slow or arrested dynamics. The emergence of a slow wetting regime is attributed to a multiplicity of metastable equilibrium states induced by nanoscale surface features. The crossover point can be dramatically advanced or delayed by adjusting specific physical parameters (e.g., viscosity of the wetting phases) and geometric properties of the surface nanostructure (e.g., nanopore/pillar radius and separation). Controlling the crossover point to arrested dynamics can effectively modify the degree of contact angle hysteresis and magnitude of liquid adhesion forces observed on surfaces of different materials. This work is supported by a SEED Award from The Office of Brookhaven National Laboratory Affairs at Stony Brook University.

  10. Fast Beam-Based BPM Calibration

    SciTech Connect

    Bertsche, K.; Loos, H.; Nuhn, H.-D.; Peters, F.; /SLAC

    2012-10-15

    The Alignment Diagnostic System (ADS) of the LCLS undulator system indicates that the 33 undulator quadrupoles have extremely high position stability over many weeks. However, beam trajectory straightness and lasing efficiency degrade more quickly than this. A lengthy Beam Based Alignment (BBA) procedure must be executed every two to four weeks to re-optimize the X-ray beam parameters. The undulator system includes RF cavity Beam Position Monitors (RFBPMs), several of which are utilized by an automatic feedback system to align the incoming electron-beam trajectory to the undulator axis. The beam trajectory straightness degradation has been traced to electronic drifts of the gain and offset of the BPMs used in the beam feedback system. To quickly recover the trajectory straightness, we have developed a fast beam-based procedure to recalibrate the BPMs. This procedure takes advantage of the high-precision monitoring capability of the ADS, which allows highly repeatable positioning of undulator quadrupoles. This report describes the ADS, the position stability of the LCLS undulator quadrupoles, and some results of the new recovery procedure.

  11. Fast SIMDized Kalman filter based track fit

    NASA Astrophysics Data System (ADS)

    Gorbunov, S.; Kebschull, U.; Kisel, I.; Lindenstruth, V.; Müller, W. F. J.

    2008-03-01

    Modern high energy physics experiments have to process terabytes of input data produced in particle collisions. The core of many data reconstruction algorithms in high energy physics is the Kalman filter. Therefore, the speed of Kalman filter based algorithms is of crucial importance in on-line data processing. This is especially true for the combinatorial track finding stage where the Kalman filter based track fit is used very intensively. Therefore, developing fast reconstruction algorithms, which use maximum available power of processors, is important, in particular for the initial selection of events which carry signals of interesting physics. One of such powerful feature supported by almost all up-to-date PC processors is a SIMD instruction set, which allows packing several data items in one register and to operate on all of them, thus achieving more operations per clock cycle. The novel Cell processor extends the parallelization further by combining a general-purpose PowerPC processor core with eight streamlined coprocessing elements which greatly accelerate vector processing applications. In the investigation described here, after a significant memory optimization and a comprehensive numerical analysis, the Kalman filter based track fitting algorithm of the CBM experiment has been vectorized using inline operator overloading. Thus the algorithm continues to be flexible with respect to any CPU family used for data reconstruction. Because of all these changes the SIMDized Kalman filter based track fitting algorithm takes 1 μs per track that is 10000 times faster than the initial version. Porting the algorithm to a Cell Blade computer gives another factor of 10 of the speedup. Finally, we compare performance of the tracking algorithm running on three different CPU architectures: Intel Xeon, AMD Opteron and Cell Broadband Engine.

  12. Photogrammetry research for FAST eleven-meter reflector panel surface shape measurement

    NASA Astrophysics Data System (ADS)

    Zhou, Rongwei; Zhu, Lichun; Li, Weimin; Hu, Jingwen; Zhai, Xuebing

    2010-10-01

    In order to design and manufacture the Five-hundred-meter Aperture Spherical Radio Telescope (FAST) active reflector measuring equipment, measurement on each reflector panel surface shape was presented, static measurement of the whole neutral spherical network of nodes was performed, real-time dynamic measurement at the cable network dynamic deformation was undertaken. In the implementation process of the FAST, reflector panel surface shape detection was completed before eleven-meter reflector panel installation. Binocular vision system was constructed based on the method of binocular stereo vision in machine vision, eleven-meter reflector panel surface shape was measured with photogrammetry method. Cameras were calibrated with the feature points. Under the linearity camera model, the lighting spot array was used as calibration standard pattern, and the intrinsic and extrinsic parameters were acquired. The images were collected for digital image processing and analyzing with two cameras, feature points were extracted with the detection algorithm of characteristic points, and those characteristic points were matched based on epipolar constraint method. Three-dimensional reconstruction coordinates of feature points were analyzed and reflective panel surface shape structure was established by curve and surface fitting method. The error of reflector panel surface shape was calculated to realize automatic measurement on reflector panel surface shape. The results show that unit reflector panel surface inspection accuracy was 2.30mm, within the standard deviation error of 5.00mm. Compared with the requirement of reflector panel machining precision, photogrammetry has fine precision and operation feasibility on eleven-meter reflector panel surface shape measurement for FAST.

  13. Fast ion surface energy loss and straggling in the surface wake fields.

    PubMed

    Nandi, T; Haris, K; Hala; Singh, Gurjeet; Kumar, Pankaj; Kumar, Rajesh; Saini, S K; Khan, S A; Jhingan, Akhil; Verma, P; Tauheed, A; Mehta, D; Berry, H G

    2013-04-19

    We have measured the stopping powers and straggling of fast, highly ionized atoms passing through thin bilayer targets made up of metals and insulators. We were surprised to find that the energy losses as well as the straggling depend on the ordering of the target and have small but significantly different values on bilayer reversal. We ascribe this newly found difference in energy loss to the surface energy loss field effect due to the differing surface wake fields as the beam exits the target in the two cases. This finding is validated with experiments using several different projectiles, velocities, and bilayer targets. Both partners of the diatomic molecular ions also display similar results. A comparison of the energy loss results with those of previous theoretical predictions for the surface wake potential for fast ions in solids supports the existence of a self-wake. PMID:23821777

  14. A CANDU-Based Fast Irradiation Reactor

    SciTech Connect

    Shatilla, Youssef

    2006-07-01

    A new steady-state fast neutron reactor is needed to satisfy the testing needs of Generation IV reactors, the Space Propulsion Program, and the Advanced Fuel Cycle Initiative. This paper presents a new concept for a CANDU-based fast irradiation reactor that is horizontal in orientation, with individual pressure tubes running the entire length of the scattering-medium tank (Calandria) filled with Lead-Bismuth-Eutectic (LBE). This approach for a test reactor will provide more flexibility in refueling, sample removal, and ability to completely re-configure the core to meet different users' requirements. Full core neutronic analysis of several fuel/coolant/geometry combinations showed a small hexagonal, LBE-cooled, U-Pu-10Zr fuel, with a core power of 100 MW{sub th} produced a fast flux (>0.1 MeV) of 1.5 x 10{sup 15} n/cm{sup 2} sec averaged over the whole length of six irradiation channels with a total testing volume of more than 77 liters. In-core breeding allowed the Pu-239 enrichment to be 15.3% which should result in core continuous operation for 180 effective full power days. Other coolants investigated included high pressure water steam and helium. An innovative shutdown/control system which consisted of the six outermost fuel channels was proven to be effective in shutting the core down when flooded with boric acid as a neutron absorber. The new shutdown/control system has the advantage of causing the minimum perturbation of the axial flux shape when the control channels are partially flooded with boric acid. This is because the acid is injected homogeneously along the control channel in contrast to regular control rods that are injected partially causing an axial perturbation in the core flux which in turn reduces safety analysis margins. The new shutdown/control system is not required to penetrate the core in a direction vertical to the fuel channels which allowed the freedom of changing core pitch as deemed necessary. A preliminary thermal hydraulic analysis

  15. Measurement of the Surface and Underground Neutron Spectra with the UMD/NIST Fast Neutron Spectrometers

    NASA Astrophysics Data System (ADS)

    Langford, Thomas J.

    The typical fast neutron detector falls into one of two categories, Bonner sphere spectrometers and liquid scintillator proton recoil detectors. These two detector types have traditionally been used to measure fast neutrons at the surface and in low background environments. The cosmogenic neutron spectrum and flux is an important parameter for a number of experimental efforts, including procurement of low background materials and the prediction of electronic device faults. Fast neutrons can also cause problems for underground low-background experiments, through material activation or signals that mimic rare events. Current detector technology is not sufficient to properly characterize these backgrounds. To this end, the University of Maryland and the National Institute of Standards and Technology designed, developed, and deployed two Fast Neutron Spectrometers (FaNS) comprised of plastic scintillator and 3He proportional counters. The detectors are based upon capture-gated spectroscopy, a technique that demands a delayed coincidence between a neutron scatter and the resulting neutron capture after thermalization. This technique provides both particle identification and knowledge that the detected neutron fully thermalized. This improves background rejection capabilities and energy resolution. Presented are the design, development, and deployment of FaNS-1 and FaNS-2. Both detectors were characterized using standard fields at NIST, including calibrated 252Cf neutron sources and two monoenergetic neutron generators. Measurements of the surface fast neutron spectrum and flux have been made with both detectors, which are compared with previous measurements by traditional detectors. Additionally, FaNS-1 was deployed at the Kimballton Underground Research Facility (KURF) in Ripplemead, VA. A measurement of the fast neutron spectrum and flux at KURF is presented as well. FaNS-2 is currently installed in a shallow underground laboratory where it is measuring the muon

  16. A fast dynamic mode in rare earth based glasses

    NASA Astrophysics Data System (ADS)

    Zhao, L. Z.; Xue, R. J.; Zhu, Z. G.; Ngai, K. L.; Wang, W. H.; Bai, H. Y.

    2016-05-01

    Metallic glasses (MGs) usually exhibit only slow β-relaxation peak, and the signature of the fast dynamic is challenging to be observed experimentally in MGs. We report a general and unusual fast dynamic mode in a series of rare earth based MGs manifested as a distinct fast β'-relaxation peak in addition to slow β-relaxation and α-relaxation peaks. We show that the activation energy of the fast β'-relaxation is about 12RTg and is equivalent to the activation of localized flow event. The coupling of these dynamic processes as well as their relationship with glass transition and structural heterogeneity is discussed.

  17. A fast dynamic mode in rare earth based glasses.

    PubMed

    Zhao, L Z; Xue, R J; Zhu, Z G; Ngai, K L; Wang, W H; Bai, H Y

    2016-05-28

    Metallic glasses (MGs) usually exhibit only slow β-relaxation peak, and the signature of the fast dynamic is challenging to be observed experimentally in MGs. We report a general and unusual fast dynamic mode in a series of rare earth based MGs manifested as a distinct fast β'-relaxation peak in addition to slow β-relaxation and α-relaxation peaks. We show that the activation energy of the fast β'-relaxation is about 12RTg and is equivalent to the activation of localized flow event. The coupling of these dynamic processes as well as their relationship with glass transition and structural heterogeneity is discussed. PMID:27250316

  18. Fast imaging with surface-related multiples by sparse inversion

    NASA Astrophysics Data System (ADS)

    Tu, Ning; Herrmann, Felix J.

    2015-04-01

    In marine exploration seismology, surface-related multiples are usually treated as noise mainly because subsequent processing steps, such as migration velocity analysis and imaging, require multiple-free data. Failure to remove these wavefield components from the data may lead to erroneous estimates for migration velocity or result in strong coherent artefacts that interfere with the imaged reflectors. However, multiples can carry complementary information compared to primaries, as they interact with the free surface and are therefore exposed more to the subsurface. Recent work has shown that when processed correctly multiples can improve seismic illumination. Given a sufficiently accurate background velocity model and an estimate for the source signature, we propose a new and computationally efficient linearized inversion procedure based on two-way wave equations, which produces accurate images of the subsurface from the total upgoing wavefield including surface-related multiples. Modelling of the surface-related multiples in the proposed method derives from the well-known surface-related multiple elimination method. We incur a minimal overhead from incorporating the multiples by having the wave-equation solver carry out the multiple predictions via the inclusion of an areal source instead of expensive dense matrix-matrix multiplications. By using subsampling techniques, we obtain high-quality true-amplitude least-squares migrated images at computational costs of roughly a single reverse-time migration (RTM) with all the data. These images are virtually free of coherent artefacts from multiples. Proper inversion of the multiples would be computationally infeasible without using these techniques that significantly bring down the cost. By promoting sparsity in the curvelet domain and using rerandomization, out method gains improved robustness to errors in the background velocity model, and errors incurred in the linearization of the wave equation with respect to the

  19. A Simple and Fast Spline Filtering Algorithm for Surface Metrology

    PubMed Central

    Zhang, Hao; Ott, Daniel; Song, John; Tong, Mingsi; Chu, Wei

    2015-01-01

    Spline filters and their corresponding robust filters are commonly used filters recommended in ISO (the International Organization for Standardization) standards for surface evaluation. Generally, these linear and non-linear spline filters, composed of symmetric, positive-definite matrices, are solved in an iterative fashion based on a Cholesky decomposition. They have been demonstrated to be relatively efficient, but complicated and inconvenient to implement. A new spline-filter algorithm is proposed by means of the discrete cosine transform or the discrete Fourier transform. The algorithm is conceptually simple and very convenient to implement. PMID:26958443

  20. A fast method to measure the 3D surface of the human heart

    NASA Astrophysics Data System (ADS)

    Cao, Yiping; Su, Xianyu; Xiang, Liqun; Chen, Wenjing; Zhang, Qican

    2003-12-01

    Three-dimensional (3-D) automatic measurement of an object is widely used in many fields. In Biology and Medicine society, it can be applicable for surgery, orthopedics, viscera disease analysis and diagnosis etc. Here a new fast method to measure the 3D surface of human heart is proposed which can provide doctors a lot of information, such as the size of heart profile, the sizes of the left or right heart ventricle, and the curvature center and radius of heart ventricle, to fully analyze and diagnose pathobiology of human heart. The new fast method is optically and noncontacted and based upon the Phase Measurement Profilometry (PMP), which has higher measuring precision. A human heart specimen experiment has verified our method.

  1. Coupled instabilities of surface crease and bulk bending during fast free swelling of hydrogels.

    PubMed

    Takahashi, Riku; Ikura, Yumihiko; King, Daniel R; Nonoyama, Takayuki; Nakajima, Tasuku; Kurokawa, Takayuki; Kuroda, Hirotoshi; Tonegawa, Yoshihiro; Gong, Jian Ping

    2016-06-21

    Most studies on hydrogel swelling instability have been focused on a constrained boundary condition. In this paper, we studied the mechanical instability of a piece of disc-shaped hydrogel during free swelling. The fast swelling of the gel induces two swelling mismatches; a surface-inner layer mismatch and an annulus-disc mismatch, which lead to the formation of a surface crease pattern and a saddle-like bulk bending, respectively. For the first time, a stripe-like surface crease that is at a right angle on the two surfaces of the gel was observed. This stripe pattern is related to the mechanical coupling of surface instability and bulk bending, which is justified by investigating the swelling-induced surface pattern on thin hydrogel sheets fixed onto a saddle-shaped substrate prior to swelling. A theoretical mechanism based on an energy model was developed to show an anisotropic stripe-like surface crease pattern on a saddle-shaped surface. These results might be helpful to develop novel strategies for controlling crease patterns on soft and wet materials by changing their three-dimensional shape. PMID:27108760

  2. A New Fast Algorithm to Completely Account for Non-Lambertian Surface Reflection of The Earth

    NASA Technical Reports Server (NTRS)

    Qin, Wen-Han; Herman, Jay R.; Ahmad, Ziauddin; Einaudi, Franco (Technical Monitor)

    2000-01-01

    Surface bidirectional reflectance distribution function (BRDF) influences not only radiance just about the surface, but that emerging from the top of the atmosphere (TOA). In this study we propose a new, fast and accurate, algorithm CASBIR (correction for anisotropic surface bidirectional reflection) to account for such influences on radiance measured above TOA. This new algorithm is based on a 4-stream theory that separates the radiation field into direct and diffuse components in both upwelling and downwelling directions. This is important because the direct component accounts for a substantial portion of incident radiation under a clear sky, and the BRDF effect is strongest in the reflection of the direct radiation reaching the surface. The model is validated by comparison with a full-scale, vector radiation transfer model for the atmosphere-surface system. The result demonstrates that CASBIR performs very well (with overall relative difference of less than one percent) for all solar and viewing zenith and azimuth angles considered in wavelengths from ultraviolet to near-infrared over three typical, but very different surface types. Application of this algorithm includes both accounting for non-Lambertian surface scattering on the emergent radiation above TOA and a potential approach for surface BRDF retrieval from satellite measured radiance.

  3. Reactive scattering of H{sub 2} from metal surfaces under fast-grazing-incidence conditions

    SciTech Connect

    Diaz, C.; Martin, F.

    2010-07-15

    We have studied the interaction of molecular hydrogen with metal surfaces under fast-grazing-incidence conditions, by means of classical dynamics calculations based on density functional theory six-dimensional potential energy surfaces. We have performed calculations on two activated systems, H{sub 2}/NiAl(110) and H{sub 2}/Cu(111), and on two nonactivated systems, H{sub 2}/Pd(111) and H{sub 2}/Pd(110). We show that for rather open surfaces the computed 1-R probabilities (where R represents the reflectivity) as a function of the normal collision energy at grazing incidence (along low-Miller-index directions) mimic reasonably well the dissociative adsorption probabilities obtained at normal incidence and thermal energies from the dissociation threshold up to the saturation limit. Our results indicate that fast grazing incidence experiments could be used as complement to traditional sticking experiments at thermal energies to determine dissociative adsorption saturation limits, which are usually unreachable due to limitations in traditional molecular beam experiments

  4. A Fast Variational Method for the Construction of Resolution Adaptive C-Smooth Molecular Surfaces.

    PubMed

    Bajaj, Chandrajit L; Xu, Guoliang; Zhang, Qin

    2009-05-01

    We present a variational approach to smooth molecular (proteins, nucleic acids) surface constructions, starting from atomic coordinates, as available from the protein and nucleic-acid data banks. Molecular dynamics (MD) simulations traditionally used in understanding protein and nucleic-acid folding processes, are based on molecular force fields, and require smooth models of these molecular surfaces. To accelerate MD simulations, a popular methodology is to employ coarse grained molecular models, which represent clusters of atoms with similar physical properties by psuedo- atoms, resulting in coarser resolution molecular surfaces. We consider generation of these mixed-resolution or adaptive molecular surfaces. Our approach starts from deriving a general form second order geometric partial differential equation in the level-set formulation, by minimizing a first order energy functional which additionally includes a regularization term to minimize the occurrence of chemically infeasible molecular surface pockets or tunnel-like artifacts. To achieve even higher computational efficiency, a fast cubic B-spline C(2) interpolation algorithm is also utilized. A narrow band, tri-cubic B-spline level-set method is then used to provide C(2) smooth and resolution adaptive molecular surfaces. PMID:19802355

  5. FAST TRACK COMMUNICATION: Graphene based quantum dots

    NASA Astrophysics Data System (ADS)

    Zhang, H. G.; Hu, H.; Pan, Y.; Mao, J. H.; Gao, M.; Guo, H. M.; Du, S. X.; Greber, T.; Gao, H.-J.

    2010-08-01

    Laterally localized electronic states are identified on a single layer of graphene on ruthenium by low temperature scanning tunneling spectroscopy (STS). The individual states are separated by 3 nm and comprise regions of about 90 carbon atoms. This constitutes a highly regular quantum dot-array with molecular precision. It is evidenced by quantum well resonances (QWRs) with energies that relate to the corrugation of the graphene layer. The dI/dV conductance spectra are modeled by a layer height dependent potential-well with a delta-function potential that describes the barrier for electron penetration into graphene. The resulting QWRs are strongest and lowest in energy on the isolated 'hill' regions with a diameter of 2 nm, where the graphene is decoupled from the surface.

  6. Sample-Based Surface Coloring

    PubMed Central

    Bürger, Kai; Krüger, Jens; Westermann, Rüdiger

    2011-01-01

    In this paper, we present a sample-based approach for surface coloring, which is independent of the original surface resolution and representation. To achieve this, we introduce the Orthogonal Fragment Buffer (OFB)—an extension of the Layered Depth Cube—as a high-resolution view-independent surface representation. The OFB is a data structure that stores surface samples at a nearly uniform distribution over the surface, and it is specifically designed to support efficient random read/write access to these samples. The data access operations have a complexity that is logarithmic in the depth complexity of the surface. Thus, compared to data access operations in tree data structures like octrees, data-dependent memory access patterns are greatly reduced. Due to the particular sampling strategy that is employed to generate an OFB, it also maintains sample coherence, and thus, exhibits very good spatial access locality. Therefore, OFB-based surface coloring performs significantly faster than sample-based approaches using tree structures. In addition, since in an OFB, the surface samples are internally stored in uniform 2D grids, OFB-based surface coloring can efficiently be realized on the GPU to enable interactive coloring of high-resolution surfaces. On the OFB, we introduce novel algorithms for color painting using volumetric and surface-aligned brushes, and we present new approaches for particle-based color advection along surfaces in real time. Due to the intermediate surface representation we choose, our method can be used to color polygonal surfaces as well as any other type of surface that can be sampled. PMID:20616392

  7. Sample-based surface coloring.

    PubMed

    Bürger, Kai; Krüger, Jens; Westermann, Rüdiger

    2010-01-01

    In this paper, we present a sample-based approach for surface coloring, which is independent of the original surface resolution and representation. To achieve this, we introduce the Orthogonal Fragment Buffer (OFB)-an extension of the Layered Depth Cube-as a high-resolution view-independent surface representation. The OFB is a data structure that stores surface samples at a nearly uniform distribution over the surface, and it is specifically designed to support efficient random read/write access to these samples. The data access operations have a complexity that is logarithmic in the depth complexity of the surface. Thus, compared to data access operations in tree data structures like octrees, data-dependent memory access patterns are greatly reduced. Due to the particular sampling strategy that is employed to generate an OFB, it also maintains sample coherence, and thus, exhibits very good spatial access locality. Therefore, OFB-based surface coloring performs significantly faster than sample-based approaches using tree structures. In addition, since in an OFB, the surface samples are internally stored in uniform 2D grids, OFB-based surface coloring can efficiently be realized on the GPU to enable interactive coloring of high-resolution surfaces. On the OFB, we introduce novel algorithms for color painting using volumetric and surface-aligned brushes, and we present new approaches for particle-based color advection along surfaces in real time. Due to the intermediate surface representation we choose, our method can be used to color polygonal surfaces as well as any other type of surface that can be sampled. PMID:20616392

  8. Fast Algorithms for Model-Based Diagnosis

    NASA Technical Reports Server (NTRS)

    Fijany, Amir; Barrett, Anthony; Vatan, Farrokh; Mackey, Ryan

    2005-01-01

    Two improved new methods for automated diagnosis of complex engineering systems involve the use of novel algorithms that are more efficient than prior algorithms used for the same purpose. Both the recently developed algorithms and the prior algorithms in question are instances of model-based diagnosis, which is based on exploring the logical inconsistency between an observation and a description of a system to be diagnosed. As engineering systems grow more complex and increasingly autonomous in their functions, the need for automated diagnosis increases concomitantly. In model-based diagnosis, the function of each component and the interconnections among all the components of the system to be diagnosed (for example, see figure) are represented as a logical system, called the system description (SD). Hence, the expected behavior of the system is the set of logical consequences of the SD. Faulty components lead to inconsistency between the observed behaviors of the system and the SD. The task of finding the faulty components (diagnosis) reduces to finding the components, the abnormalities of which could explain all the inconsistencies. Of course, the meaningful solution should be a minimal set of faulty components (called a minimal diagnosis), because the trivial solution, in which all components are assumed to be faulty, always explains all inconsistencies. Although the prior algorithms in question implement powerful methods of diagnosis, they are not practical because they essentially require exhaustive searches among all possible combinations of faulty components and therefore entail the amounts of computation that grow exponentially with the number of components of the system.

  9. Fast musculoskeletal registration based on shape matching.

    PubMed

    Gilles, Benjamin; Pai, Dinesh K

    2008-01-01

    This paper presents a new method for computing elastic and plastic deformations in the context of discrete deformable model-based registration. Internal forces are estimated by averaging local transforms between reference and current particle positions. Our technique can accommodate large non-linear deformations, and is unconditionally stable. Moreover, it is simple to implement and versatile. We show how to tune model stiffness and computational cost, which is important for efficient registration, and demonstrate our technique in the complex problem of inter-patient musculoskeletal registration. PMID:18982681

  10. Using dynamic interferometric synthetic aperature radar (InSAR) to image fast-moving surface waves

    DOEpatents

    Vincent, Paul

    2005-06-28

    A new differential technique and system for imaging dynamic (fast moving) surface waves using Dynamic Interferometric Synthetic Aperture Radar (InSAR) is introduced. This differential technique and system can sample the fast-moving surface displacement waves from a plurality of moving platform positions in either a repeat-pass single-antenna or a single-pass mode having a single-antenna dual-phase receiver or having dual physically separate antennas, and reconstruct a plurality of phase differentials from a plurality of platform positions to produce a series of desired interferometric images of the fast moving waves.

  11. Fast and accurate line scanner based on white light interferometry

    NASA Astrophysics Data System (ADS)

    Lambelet, Patrick; Moosburger, Rudolf

    2013-04-01

    White-light interferometry is a highly accurate technology for 3D measurements. The principle is widely utilized in surface metrology instruments but rarely adopted for in-line inspection systems. The main challenges for rolling out inspection systems based on white-light interferometry to the production floor are its sensitivity to environmental vibrations and relatively long measurement times: a large quantity of data needs to be acquired and processed in order to obtain a single topographic measurement. Heliotis developed a smart-pixel CMOS camera (lock-in camera) which is specially suited for white-light interferometry. The demodulation of the interference signal is treated at the level of the pixel which typically reduces the acquisition data by one orders of magnitude. Along with the high bandwidth of the dedicated lock-in camera, vertical scan-speeds of more than 40mm/s are reachable. The high scan speed allows for the realization of inspection systems that are rugged against external vibrations as present on the production floor. For many industrial applications such as the inspection of wafer-bumps, surface of mechanical parts and solar-panel, large areas need to be measured. In this case either the instrument or the sample are displaced laterally and several measurements are stitched together. The cycle time of such a system is mostly limited by the stepping time for multiple lateral displacements. A line-scanner based on white light interferometry would eliminate most of the stepping time while maintaining robustness and accuracy. A. Olszak proposed a simple geometry to realize such a lateral scanning interferometer. We demonstrate that such inclined interferometers can benefit significantly from the fast in-pixel demodulation capabilities of the lock-in camera. One drawback of an inclined observation perspective is that its application is limited to objects with scattering surfaces. We therefore propose an alternate geometry where the incident light is

  12. Fast spatial ancestry via flexible allele frequency surfaces

    PubMed Central

    Rañola, John Michael; Novembre, John; Lange, Kenneth

    2014-01-01

    Motivation: Unique modeling and computational challenges arise in locating the geographic origin of individuals based on their genetic backgrounds. Single-nucleotide polymorphisms (SNPs) vary widely in informativeness, allele frequencies change non-linearly with geography and reliable localization requires evidence to be integrated across a multitude of SNPs. These problems become even more acute for individuals of mixed ancestry. It is hardly surprising that matching genetic models to computational constraints has limited the development of methods for estimating geographic origins. We attack these related problems by borrowing ideas from image processing and optimization theory. Our proposed model divides the region of interest into pixels and operates SNP by SNP. We estimate allele frequencies across the landscape by maximizing a product of binomial likelihoods penalized by nearest neighbor interactions. Penalization smooths allele frequency estimates and promotes estimation at pixels with no data. Maximization is accomplished by a minorize–maximize (MM) algorithm. Once allele frequency surfaces are available, one can apply Bayes’ rule to compute the posterior probability that each pixel is the pixel of origin of a given person. Placement of admixed individuals on the landscape is more complicated and requires estimation of the fractional contribution of each pixel to a person’s genome. This estimation problem also succumbs to a penalized MM algorithm. Results: We applied the model to the Population Reference Sample (POPRES) data. The model gives better localization for both unmixed and admixed individuals than existing methods despite using just a small fraction of the available SNPs. Computing times are comparable with the best competing software. Availability and implementation: Software will be freely available as the OriGen package in R. Contact: ranolaj@uw.edu or klange@ucla.edu Supplementary information: Supplementary data are available at

  13. GPU-based fast gamma index calculation

    NASA Astrophysics Data System (ADS)

    Gu, Xuejun; Jia, Xun; Jiang, Steve B.

    2011-03-01

    The γ-index dose comparison tool has been widely used to compare dose distributions in cancer radiotherapy. The accurate calculation of γ-index requires an exhaustive search of the closest Euclidean distance in the high-resolution dose-distance space. This is a computational intensive task when dealing with 3D dose distributions. In this work, we combine a geometric method (Ju et al 2008 Med. Phys. 35 879-87) with a radial pre-sorting technique (Wendling et al 2007 Med. Phys. 34 1647-54) and implement them on computer graphics processing units (GPUs). The developed GPU-based γ-index computational tool is evaluated on eight pairs of IMRT dose distributions. The γ-index calculations can be finished within a few seconds for all 3D testing cases on one single NVIDIA Tesla C1060 card, achieving 45-75× speedup compared to CPU computations conducted on an Intel Xeon 2.27 GHz processor. We further investigated the effect of various factors on both CPU and GPU computation time. The strategy of pre-sorting voxels based on their dose difference values speeds up the GPU calculation by about 2.7-5.5 times. For n-dimensional dose distributions, γ-index calculation time on CPU is proportional to the summation of γn over all voxels, while that on GPU is affected by γn distributions and is approximately proportional to the γn summation over all voxels. We found that increasing the resolution of dose distributions leads to a quadratic increase of computation time on CPU, while less-than-quadratic increase on GPU. The values of dose difference and distance-to-agreement criteria also have an impact on γ-index calculation time.

  14. GPU-based fast gamma index calculation.

    PubMed

    Gu, Xuejun; Jia, Xun; Jiang, Steve B

    2011-03-01

    The γ-index dose comparison tool has been widely used to compare dose distributions in cancer radiotherapy. The accurate calculation of γ-index requires an exhaustive search of the closest Euclidean distance in the high-resolution dose-distance space. This is a computational intensive task when dealing with 3D dose distributions. In this work, we combine a geometric method (Ju et al 2008 Med. Phys. 35 879-87) with a radial pre-sorting technique (Wendling et al 2007 Med. Phys. 34 1647-54) and implement them on computer graphics processing units (GPUs). The developed GPU-based γ-index computational tool is evaluated on eight pairs of IMRT dose distributions. The γ-index calculations can be finished within a few seconds for all 3D testing cases on one single NVIDIA Tesla C1060 card, achieving 45-75× speedup compared to CPU computations conducted on an Intel Xeon 2.27 GHz processor. We further investigated the effect of various factors on both CPU and GPU computation time. The strategy of pre-sorting voxels based on their dose difference values speeds up the GPU calculation by about 2.7-5.5 times. For n-dimensional dose distributions, γ-index calculation time on CPU is proportional to the summation of γ(n) over all voxels, while that on GPU is affected by γ(n) distributions and is approximately proportional to the γ(n) summation over all voxels. We found that increasing the resolution of dose distributions leads to a quadratic increase of computation time on CPU, while less-than-quadratic increase on GPU. The values of dose difference and distance-to-agreement criteria also have an impact on γ-index calculation time. PMID:21317484

  15. Spiraling Edge: Fast Surface Reconstruction from Partially Organized Sample Points

    SciTech Connect

    Angel, E.; Crossno, P.

    1999-01-06

    Many applications produce three-dimensional points that must be further processed to generate a surface. Surface reconstruction algorithms that start with a set of unorganized points are extremely time-consuming. Often, however, points are generated such that there is additional information available to the reconstruction algorithm. We present a specialized algorithm for surface reconstruction that is three orders of magnitude faster than algorithms for the general case. In addition to sample point locations, our algorithm starts with normal information and knowledge of each point's neighbors. Our algorithm produces a localized approximation to the surface by creating a star-shaped triangulation between a point and a subset of its nearest neighbors. This surface patch is extended by locally triangulating each of the points along the edge of the patch. As each edge point is triangulated, it is removed from the edge and new edge points along the patch's edge are inserted in its place. The updated edge spirals out over the surface until the edge encounters a surface boundary and stops growing in that direction, or until the edge reduces to a small hole that fills itself in.

  16. Spiraling Edge: Fast Surface Reconstruction from Partially Organized Sample Points

    SciTech Connect

    Angel, Edward; Crossno, Patricia

    1999-07-12

    Many applications produce three-dimensional points that must be further processed to generate a surface. Surface reconstruction algorithms that start with a set of unorganized points are extremely time-consuming. Sometimes, however, points are generated such that there is additional information available to the reconstruction algorithm. We present Spiraling Edge, a specialized algorithm for surface reconstruction that is three orders of magnitude faster than algorithms for the general case. In addition to sample point locations, our algorithm starts with normal information and knowledge of each point's neighbors. Our algorithm produces a localized approximation to the surface by creating a star-shaped triangulation between a point and a subset of its nearest neighbors. This surface patch is extended by locally triangulating each of the points along the edge of the patch. As each edge point is triangulated, it is removed from the edge and new edge points along the patch's edge are inserted in its place. The updated edge spirals out over the surface until the edge encounters a surface boundary and stops growing in that direction, or until the edge reduces to a small hole that is filled by the final triangle.

  17. [Fast spectral modeling based on Voigt peaks].

    PubMed

    Li, Jin-rong; Dai, Lian-kui

    2012-03-01

    Indirect hard modeling (IHM) is a recently introduced method for quantitative spectral analysis, which was applied to the analysis of nonlinear relation between mixture spectrum and component concentration. In addition, IHM is an effectual technology for the analysis of components of mixture with molecular interactions and strongly overlapping bands. Before the establishment of regression model, IHM needs to model the measured spectrum as a sum of Voigt peaks. The precision of the spectral model has immediate impact on the accuracy of the regression model. A spectrum often includes dozens or even hundreds of Voigt peaks, which mean that spectral modeling is a optimization problem with high dimensionality in fact. So, large operation overhead is needed and the solution would not be numerically unique due to the ill-condition of the optimization problem. An improved spectral modeling method is presented in the present paper, which reduces the dimensionality of optimization problem by determining the overlapped peaks in spectrum. Experimental results show that the spectral modeling based on the new method is more accurate and needs much shorter running time than conventional method. PMID:22582612

  18. Interaction of fast charges with a rough metal surface

    NASA Astrophysics Data System (ADS)

    Lyon, Keenan; Zhang, Ying-Ying; Mišković, Z. L.; Song, Yuan-Hong; Wang, You-Nian

    2015-09-01

    We use the Green function formulation of a dielectric response formalism to study the dynamic polarization of a rough metal surface by a single charged particle and by a pair of charged particles that move parallel to the surface. While the surface roughness is treated nonperturbatively, the plasmon excitation of the metal electron gas is described locally. We find that the magnitudes of both the image potential and the stopping power of a single particle are increased by the increasing roughness and decreasing correlation length of the surface. On the other hand, both the long-range wake potential of a single charged particle and the interaction potential between two particles are weakly affected by the surface roughness. However, the strongest effects of the surface roughness are seen in the correlated stopping power of two charged particles, giving rise to oscillations in the dependence of the stopping ratio on their distance, both when the interparticle axis is perpendicular to their direction of motion and when the wake-related oscillations are damped by adiabatic suppression of plasmon excitations at low particle speeds.

  19. Fast Electromechanical Switches Based on Carbon Nanotubes

    NASA Technical Reports Server (NTRS)

    Kaul, Anupama; Wong, Eric; Epp, Larry

    2008-01-01

    Electrostatically actuated nanoelectromechanical switches based on carbon nanotubes have been fabricated and tested in a continuing effort to develop high-speed switches for a variety of stationary and portable electronic equipment. As explained below, these devices offer advantages over electrostatically actuated microelectromechanical switches, which, heretofore, have represented the state of the art of rapid, highly miniaturized electromechanical switches. Potential applications for these devices include computer memories, cellular telephones, communication networks, scientific instrumentation, and general radiation-hard electronic equipment. A representative device of the present type includes a single-wall carbon nanotube suspended over a trench about 130 nm wide and 20 nm deep in an electrically insulating material. The ends of the carbon nanotube are connected to metal electrodes, denoted the source and drain electrodes. At bottom of the trench is another metal electrode, denoted the pull electrode (see figure). In the off or open switch state, no voltage is applied, and the nanotube remains out of contact with the pull electrode. When a sufficiently large electric potential (switching potential) is applied between the pull electrode and either or both of the source and drain electrodes, the resulting electrostatic attraction bends and stretches the nanotube into contact with the pull electrode, thereby putting the switch into the "on" or "closed" state, in which substantial current (typically as much as hundreds of nanoamperes) is conducted. Devices of this type for use in initial experiments were fabricated on a thermally oxidized Si wafer, onto which Nb was sputter-deposited for use as the pull-electrode layer. Nb was chosen because its refractory nature would enable it to withstand the chemical and thermal conditions to be subsequently imposed for growing carbon nanotubes. A 200- nm-thick layer of SiO2 was formed on top of the Nb layer by plasma

  20. Quantum ricochets: surface capture, release and energy loss of fast ions hitting a polar surface at grazing incidence

    NASA Astrophysics Data System (ADS)

    Lucas, A. A.; Sunjic, M.; Benedek, G.; Echenique, P. M.

    2014-06-01

    A diffraction mechanism is proposed for the capture, multiple bouncing and final escape of a fast ion (keV) impinging on the surface of a polarizable material at grazing incidence. Capture and escape are effected by elastic quantum diffraction consisting of the exchange of a parallel surface wave vector G = 2π/a between the ion parallel momentum and the surface periodic potential of period a. Diffraction-assisted capture becomes possible for glancing angles Φ smaller than a critical value given by Φ c2 ≈ 2λ/a-|V im|/E, where E is the kinetic energy of the ion, λ = h/Mv its de Broglie wavelength and V im its average electronic image potential at the distance from the surface where diffraction takes place. For Φ < Φ c, the ion can fall into a selected capture state in the quasi-continuous spectrum of its image potential and execute one or several ricochets before being released by the time reversed diffraction process. The capture, ricochet and escape are accompanied by a large, periodic energy loss of several tens of eV in the forward motion caused by the coherent emission of a giant number of quanta ħω of Fuchs-Kliewer surface phonons characteristic of the polar material. An analytical calculation of the energy loss spectrum, based on the proposed diffraction process and using a model ion-phonon coupling developed earlier (Lucas et al 2013 J. Phys.: Condens. Matter 25 355009), is presented, which fully explains the experimental spectrum of Villette et al (2000 Phys. Rev. Lett. 85 3137) for Ne+ ions ricocheting on a LiF(001) surface.

  1. Fast-neutron multiplicity analysis based on liquid scintillation.

    PubMed

    Li, Sufen; Qiu, Suizheng; Zhang, Quanhu; Huo, Yonggang; Lin, Hongtao

    2016-04-01

    In this study, according to the establishment of the classical neutron multiplicity measurement equation, a fast-neutron multiplicity analysis and measurement equation is established, considering the influence of neutron scattering cross-talk, by means of theoretical analysis and computer simulation. Moreover, the fission rate F, multiplication M, and (α, n) reaction rate α in the established equation were solved. A new measurement method of scattering cross-talk was established and the established equation was validated using Geant4 simulation. The fast-neutron multiplicity counting equation has only a smaller deviation from the fast-neutron multiplicity counting system based on liquid scintillation detector, and it has a wider application prospect. PMID:26766037

  2. FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program.

    PubMed

    Lefort, Vincent; Desper, Richard; Gascuel, Olivier

    2015-10-01

    FastME provides distance algorithms to infer phylogenies. FastME is based on balanced minimum evolution, which is the very principle of Neighbor Joining (NJ). FastME improves over NJ by performing topological moves using fast, sophisticated algorithms. The first version of FastME only included Nearest Neighbor Interchange. The new 2.0 version also includes Subtree Pruning and Regrafting, while remaining as fast as NJ and providing a number of facilities: Distance estimation for DNA and proteins with various models and options, bootstrapping, and parallel computations. FastME is available using several interfaces: Command-line (to be integrated in pipelines), PHYLIP-like, and a Web server (http://www.atgc-montpellier.fr/fastme/). PMID:26130081

  3. GEM-based detectors for thermal and fast neutrons

    NASA Astrophysics Data System (ADS)

    Croci, G.; Claps, G.; Cazzaniga, C.; Foggetta, L.; Muraro, A.; Valente, P.

    2015-06-01

    Lately the problem of 3He replacement for neutron detection stimulated an intense activity research on alternative technologies based on alternative neutron converters. This paper presents briefly the results obtained with new GEM detectors optimized for fast and thermal neutrons. For thermal neutrons, we realized a side-on GEM detector based on a series of boron-coated alumina sheets placed perpendicularly to the incident neutron beam direction. This prototype has been tested at n@BTF photo-production neutron facilty in order to test its effectiveness under a very high flux gamma background. For fast neutrons, we developed new GEM detectors (called nGEM) for the CNESM diagnostic system of the SPIDER NBI prototype for ITER (RFX-Consortium, Italy) and as beam monitor for fast neutrons lines at spallation sources. The nGEM is a Triple GEM gaseous detector equipped with a polyethylene layer used to convert fast neutrons into recoil protons through the elastic scattering process. This paper describes the results obtained by testing a medium size (30 × 25 cm2 active area) nGEM detector at the ISIS spallation source on the VESUVIO beam line.

  4. Sensitivity Analysis of a process based erosion model using FAST

    NASA Astrophysics Data System (ADS)

    Gabelmann, Petra; Wienhöfer, Jan; Zehe, Erwin

    2015-04-01

    deposition are related to overland flow velocity using the equation of Engelund and Hansen and the sinking velocity of grain sizes, respectively. The sensitivity analysis was performed based on virtual hillslopes similar to those in the Weiherbach catchment. We applied the FAST-method (Fourier Amplitude Sensitivity Test), which provides a global sensitivity analysis with comparably few model runs. We varied model parameters in predefined and, for the Weiherbach catchment, physically meaningful parameter ranges. Those parameters included rainfall intensity, surface roughness, hillslope geometry, land use, erosion resistance, and soil hydraulic parameters. The results of this study allow guiding further modelling efforts in the Weiherbach catchment with respect to data collection and model modification.

  5. Fast track surface mine installation on the critical path

    SciTech Connect

    Willison, L.R.

    1986-07-01

    A deep mining area, located in the rugged woodland hills of central West Virginia, was transformed into a beehive of activity as a major new mine and preparation plant was constructed on a very tight deadline. By the time the mine was on line, BethEnergy Mines had spent $40 million to develop the two million tpy (ton per year) surface coal mining complex. In early 1984 not a stick of timber had been cut. But within a very short time (coal-wise) there was a mining area; a 600-tph heavy media cyclone preparation plant, with 36,000 and 24,000 tons of raw and clean coal storage respectively; three miles of haul roads and access roads; a 64,000-ton clean coal stocking facility with a 4000-tph reclaim system that feeds a batch-weighing, floodloading, unit-train loadout facility; a 3.5-mile railroad spur and loop; and all incidental infrastructure. This feat entailed moving more than four million cu-yd of earth, building the preparation plant and loadout facility from ground to operating in six moths, and constructing a railroad spur bridging a major highway.

  6. Fast image matching algorithm based on projection characteristics

    NASA Astrophysics Data System (ADS)

    Zhou, Lijuan; Yue, Xiaobo; Zhou, Lijun

    2011-06-01

    Based on analyzing the traditional template matching algorithm, this paper identified the key factors restricting the speed of matching and put forward a brand new fast matching algorithm based on projection. Projecting the grayscale image, this algorithm converts the two-dimensional information of the image into one-dimensional one, and then matches and identifies through one-dimensional correlation, meanwhile, because of normalization has been done, when the image brightness or signal amplitude increasing in proportion, it could also perform correct matching. Experimental results show that the projection characteristics based image registration method proposed in this article could greatly improve the matching speed, which ensuring the matching accuracy as well.

  7. A Fast MEANSHIFT Algorithm-Based Target Tracking System

    PubMed Central

    Sun, Jian

    2012-01-01

    Tracking moving targets in complex scenes using an active video camera is a challenging task. Tracking accuracy and efficiency are two key yet generally incompatible aspects of a Target Tracking System (TTS). A compromise scheme will be studied in this paper. A fast mean-shift-based Target Tracking scheme is designed and realized, which is robust to partial occlusion and changes in object appearance. The physical simulation shows that the image signal processing speed is >50 frame/s. PMID:22969397

  8. Fast wavelet based algorithms for linear evolution equations

    NASA Technical Reports Server (NTRS)

    Engquist, Bjorn; Osher, Stanley; Zhong, Sifen

    1992-01-01

    A class was devised of fast wavelet based algorithms for linear evolution equations whose coefficients are time independent. The method draws on the work of Beylkin, Coifman, and Rokhlin which they applied to general Calderon-Zygmund type integral operators. A modification of their idea is applied to linear hyperbolic and parabolic equations, with spatially varying coefficients. A significant speedup over standard methods is obtained when applied to hyperbolic equations in one space dimension and parabolic equations in multidimensions.

  9. Novel computer program for fast exact calculation of accessible and molecular surface areas and average surface curvature.

    PubMed

    Tsodikov, Oleg V; Record, M Thomas; Sergeev, Yuri V

    2002-04-30

    New computer programs, SurfRace and FastSurf, perform fast calculations of the solvent accessible and molecular (solvent excluded) surface areas of macromolecules. Program SurfRace also calculates the areas of cavities inaccessible from the outside. We introduce the definition of average curvature of molecular surface and calculate average molecular surface curvatures for each atom in a structure. All surface area and curvature calculations are analytic and therefore yield exact values of these quantities. High calculation speed of this software is achieved primarily by avoiding computationally expensive mathematical procedures wherever possible and by efficient handling of surface data structures. The programs are written initially in the language C for PCs running Windows 2000/98/NT, but their code is portable to other platforms with only minor changes in input-output procedures. The algorithm is robust and does not ignore either multiplicity or degeneracy of atomic overlaps. Fast, memory-efficient and robust execution make this software attractive for applications both in computationally expensive energy minimization algorithms, such as docking or molecular dynamics simulations, and in stand-alone surface area and curvature calculations. PMID:11939594

  10. Effect of fast mold surface temperature evolution on iPP part morphology gradients

    NASA Astrophysics Data System (ADS)

    Liparoti, Sara; Sorrentino, Andrea; Guzman, Gustavo; Cakmak, Mukerrem; Titomanlio, Giuseppe

    2016-03-01

    The control of mold surface temperature is an important factor that affects the sample surface morphology as well as the structural gradients (orientation crystal size, and type) as well as cooling stresses. The frozen layer thickness formed during the filling stage also has a very significant effect on the flow resistance and thus on the resulting pressure drop and flow length in thin wall parts. The possibility to have a hot mold during filling and a quick cooling soon afterward is a significant process enhancement particularly for specialized applications such as micro injection molding and for the reproduction of micro structured surfaces. Up to now, several methods (electromagnetic, infrared, hot vapor fleshing etc,) were tried to achieve fast temperature evolution of the mold. Unfortunately, all these methods require a complex balance between thermal and mechanical problems, equipment cost, energy consumption, safety, molding cycle time and part quality achievable. In this work, a thin electrical resistance was designed and used to generate a fast and confined temperature variation on mold surface (by joule effect). Since the whole temperature evolution can take place in a few seconds, one can couple the advantages of a high surface temperature during filling with the advantages of a low mold temperature, fast cooling and low heating dissipation. Some experiments were performed with a commercial iPP resin. The effects of the surface temperature and of the heating time (under constant electric power) on surface finishing and on the final morphology (thickness and structure of the different layers) are explored and discussed.

  11. Electrical studies on silver based fast ion conducting glassy materials

    NASA Astrophysics Data System (ADS)

    Rao, B. Appa; Kumar, E. Ramesh; Kumari, K. Rajani; Bhikshamaiah, G.

    2014-04-01

    Among all the available fast ion conductors, silver based glasses exhibit high conductivity. Further, glasses containing silver iodide enhances fast ion conducting behavior at room temperature. Glasses of various compositions of silver based fast ion conductors in the AgI-Ag2O-[(1-x)B2O3-xTeO2] (x=0 to1 mol% in steps of 0.2) glassy system have been prepared by melt quenching method. The glassy nature of the compounds has been confirmed by X-ray diffraction. The electrical conductivity (AC) measurements have been carried out in the frequency range of 1 KHz-3MHz by Impedance Analyzer in the temperature range 303-423K. The DC conductivity measurements were also carried out in the temperature range 300-523K. From both AC and DC conductivity studies, it is found that the conductivity increases and activation energy decreases with increasing the concentration of TeO2 as well as with temperature. The conductivity of the present glass system is found to be of the order of 10-2 S/cm at room temperature. The ionic transport number of these glasses is found to be 0.999 indicating that these glasses can be used as electrolyte in batteries.

  12. Electrical studies on silver based fast ion conducting glassy materials

    SciTech Connect

    Rao, B. Appa Kumar, E. Ramesh Kumari, K. Rajani Bhikshamaiah, G.

    2014-04-24

    Among all the available fast ion conductors, silver based glasses exhibit high conductivity. Further, glasses containing silver iodide enhances fast ion conducting behavior at room temperature. Glasses of various compositions of silver based fast ion conductors in the AgI−Ag{sub 2}O−[(1−x)B{sub 2}O{sub 3}−xTeO{sub 2}] (x=0 to1 mol% in steps of 0.2) glassy system have been prepared by melt quenching method. The glassy nature of the compounds has been confirmed by X-ray diffraction. The electrical conductivity (AC) measurements have been carried out in the frequency range of 1 KHz–3MHz by Impedance Analyzer in the temperature range 303–423K. The DC conductivity measurements were also carried out in the temperature range 300–523K. From both AC and DC conductivity studies, it is found that the conductivity increases and activation energy decreases with increasing the concentration of TeO{sub 2} as well as with temperature. The conductivity of the present glass system is found to be of the order of 10{sup −2} S/cm at room temperature. The ionic transport number of these glasses is found to be 0.999 indicating that these glasses can be used as electrolyte in batteries.

  13. A fast way to visualize the brain surface with volume rendering of MRI data.

    PubMed

    Matsumoto, S; Asato, R; Konishi, J

    1999-11-01

    The preprocessing of 3-dimensional (3D) MRI data constitutes a bottleneck in the process of visualizing the brain surface with volume rendering. As a fast way to achieve this preprocessing, the authors propose a simple pipeline based on an algorithm of seed-growing type, for approximate segmentation of the intradural space in T1-weighted 3D MRI data. Except for the setting of a seed and four parameters, this pipeline proceeds in an unsupervised manner; no interactive intermediate step is involved. It was tested with 15 datasets from normal adults. The result was reproducible in that as long as the seed was located within the cerebral white matter, identical segmentation was achieved for each dataset. Although the pipeline ran with gross segmentation error along the floor of the cranial cavity, it performed well along the cranial vault so that subsequent volume rendering permitted the observation of the sulco-gyral pattern over cerebral convexities. Use of this pipeline followed by volume rendering is a handy approach to the visualization of the brain surface from 3D MRI data. PMID:10587913

  14. Unidirectional Fast Growth and Forced Jumping of Stretched Droplets on Nanostructured Microporous Surfaces.

    PubMed

    Aili, Abulimiti; Li, Hongxia; Alhosani, Mohamed H; Zhang, TieJun

    2016-08-24

    Superhydrophobic nanostructured surfaces have demonstrated outstanding capability in energy and water applications by promoting dropwise condensation, where fast droplet growth and efficient condensate removal are two key parameters. However, these parameters remain contradictory. Although efficient droplet removal is easily obtained through coalescence jumping on uniform superhydrophobic surfaces, simultaneously achieving fast droplet growth is still challenging. Also, on such surfaces droplets can grow to larger sizes without restriction if there is no coalescence. In this work, we show that superhydrophobic nanostructured microporous surfaces can manipulate the droplet growth and jumping. Microporous surface morphology effectively enhances the growth of droplets in pores owing to large solid-liquid contact area. At low supersaturations, the upward growth rate (1-1.5 μm/s) of these droplets in pores is observed to be around 15-25 times that of the droplets outside the pores. Meanwhile, their top curvature radius increases relatively slowly (∼0.25 μm/s) due to pore confinement, which results in a highly stretched droplet surface. We also observed forced jumping of stretched droplets in pores either through coalescence with spherical droplets outside pores or through self-pulling without coalescence. Both experimental observation and theoretical modeling reveal that excess surface free energy stored in the stretched droplet surface and micropore confinement are responsible for this pore-scale-forced jumping. These findings reveal the insightful physics of stretched droplet dynamics and offer guidelines for the design and fabrication of novel super-repellent surfaces with microporous morphology. PMID:27486890

  15. Multiplicative-theorem-based fast Williamson-Hadamard transforms

    NASA Astrophysics Data System (ADS)

    Agaian, Sos S.; Sarukhanian, Hakob; Astola, Jaakko T.

    2002-05-01

    Hadamard matrices have received much attention in recent years, owing to their numerous known and promising applications. The difficulties of construction of N equalsV 0(mod 4)-point Hadamard transforms are related to the existence of Hadamard matrices problem. In this paper algorithms for fast computation of N-point Williamson-Hadamard transform based on multiplicative theorems are presented. Comparative estimates revealing the efficiency of the proposed algorithms with respect to the known ones are given. The results of numerical examples are presented.

  16. Fast Waves at the Base of the Cochlea

    PubMed Central

    Recio-Spinoso, Alberto; Rhode, William S.

    2015-01-01

    Georg von Békésy observed that the onset times of responses to brief-duration stimuli vary as a function of distance from the stapes, with basal regions starting to move earlier than apical ones. He noticed that the speed of signal propagation along the cochlea is slow when compared with the speed of sound in water. Fast traveling waves have been recorded in the cochlea, but their existence is interpreted as the result of an experiment artifact. Accounts of the timing of vibration onsets at the base of the cochlea generally agree with Békésy’s results. Some authors, however, have argued that the measured delays are too short for consistency with Békésy’s theory. To investigate the speed of the traveling wave at the base of the cochlea, we analyzed basilar membrane (BM) responses to clicks recorded at several locations in the base of the chinchilla cochlea. The initial component of the BM response matches remarkably well the initial component of the stapes response, after a 4-μs delay of the latter. A similar conclusion is reached by analyzing onset times of time-domain gain functions, which correspond to BM click responses normalized by middle-ear input. Our results suggest that BM responses to clicks arise from a combination of fast and slow traveling waves. PMID:26062000

  17. FFBSKAT: fast family-based sequence kernel association test.

    PubMed

    Svishcheva, Gulnara R; Belonogova, Nadezhda M; Axenovich, Tatiana I

    2014-01-01

    The kernel machine-based regression is an efficient approach to region-based association analysis aimed at identification of rare genetic variants. However, this method is computationally complex. The running time of kernel-based association analysis becomes especially long for samples with genetic (sub) structures, thus increasing the need to develop new and effective methods, algorithms, and software packages. We have developed a new R-package called fast family-based sequence kernel association test (FFBSKAT) for analysis of quantitative traits in samples of related individuals. This software implements a score-based variance component test to assess the association of a given set of single nucleotide polymorphisms with a continuous phenotype. We compared the performance of our software with that of two existing software for family-based sequence kernel association testing, namely, ASKAT and famSKAT, using the Genetic Analysis Workshop 17 family sample. Results demonstrate that FFBSKAT is several times faster than other available programs. In addition, the calculations of the three-compared software were similarly accurate. With respect to the available analysis modes, we combined the advantages of both ASKAT and famSKAT and added new options to empower FFBSKAT users. The FFBSKAT package is fast, user-friendly, and provides an easy-to-use method to perform whole-exome kernel machine-based regression association analysis of quantitative traits in samples of related individuals. The FFBSKAT package, along with its manual, is available for free download at http://mga.bionet.nsc.ru/soft/FFBSKAT/. PMID:24905468

  18. Algorithms for Accurate and Fast Plotting of Contour Surfaces in 3D Using Hexahedral Elements

    NASA Astrophysics Data System (ADS)

    Singh, Chandan; Saini, Jaswinder Singh

    2016-07-01

    In the present study, Fast and accurate algorithms for the generation of contour surfaces in 3D are described using hexahedral elements which are popular in finite element analysis. The contour surfaces are described in the form of groups of boundaries of contour segments and their interior points are derived using the contour equation. The locations of contour boundaries and the interior points on contour surfaces are as accurate as the interpolation results obtained by hexahedral elements and thus there are no discrepancies between the analysis and visualization results.

  19. Algorithms for Accurate and Fast Plotting of Contour Surfaces in 3D Using Hexahedral Elements

    NASA Astrophysics Data System (ADS)

    Singh, Chandan; Saini, Jaswinder Singh

    2016-05-01

    In the present study, Fast and accurate algorithms for the generation of contour surfaces in 3D are described using hexahedral elements which are popular in finite element analysis. The contour surfaces are described in the form of groups of boundaries of contour segments and their interior points are derived using the contour equation. The locations of contour boundaries and the interior points on contour surfaces are as accurate as the interpolation results obtained by hexahedral elements and thus there are no discrepancies between the analysis and visualization results.

  20. COMBINED ANALYSIS OF THORIUM AND FAST NEUTRON DATA AT THE LUNAR SURFACE

    SciTech Connect

    O. GASNAULT; W. FELDMAN; ET AL

    2001-01-01

    The global distribution of the radioactive elements (U, K, Th) at the lunar surface is an important parameter for an understanding of lunar evolution, because they have provided continuous heat over the lifetime of the Moon. Today, only the thorium distribution is available for the whole lunar surface [1]. Another key parameter that characterize the surface of the Moon is the presence of mare basalts. These basalts are concentrated on the nearside and are represented by materials with high-Fe content, sometimes associated with high-Ti. We demonstrated elsewhere that the fast neutron measurement made by Lunar Prospector is representative of the average soil atomic mass [2]. is primarily dominated by Fe and Ti in basaltic terranes, and therefore the map of the fast neutrons provides a good delineation of mare basalts. We focus here on the correlated variations of thorium abundances and fast neutron fluxes averaged over areas of 360 km in diameter, in an attempt to provide a better understanding of the thorium emplacement on the surface of the Moon.

  1. Fast dye removal from water by starch-based nanocomposites.

    PubMed

    Gomes, Raelle F; de Azevedo, Antonio C Neto; Pereira, Antonio G B; Muniz, Edvani C; Fajardo, André R; Rodrigues, Francisco H A

    2015-09-15

    Robust and efficient methylene blue (MB) adsorbent was prepared based on starch/cellulose nanowhiskers hydrogel composite. Maximum MB adsorption capacity of ∼2050mgperg of dried hydrogel was obtained with the composite at 5wt.% of cellulose nanowhiskers and at pH 5. Adsorption capacity varied from 1450mg/g to 2050mg/g with increasing the initial MB concentration from 1500mg/L to 2500mg/L, respectively. For all the concentrations studied ca. 90% of MB was removed by the adsorbent. Optimal conditions were obtained at pH⩾5 due to the generation of negatively charged groups (COO(-)) in the adsorbent, which can strongly interact with the positive charges from MB. The main advantage of this system over other reported adsorbents, besides the fact of being synthesized from biodegradable polymers (starch and cellulose), is its fast adsorption kinetics that follows the pseudo-second order model, which is based on chimisorption phenomenon. Saturation condition was reached as fast as 1h of experiments owing to the formation of an adsorbed MB monolayer as suggested by the Langmuir isotherm model. Desorption experiments showed 60wt.% of MB loaded can be removed from the adsorbent by immersing it in a pH 1 solution, showing its feasibility to be reused. Therefore, starch/cellulose nanowhiskers hydrogel composite presents outstanding capacity to be employed in the remediation of MB contaminated wastewaters. PMID:26037269

  2. Strong earthquakes knowledge base for calibrating fast damage assessment systems

    NASA Astrophysics Data System (ADS)

    Frolova, N.; Kozlov, M.; Larionov, V.; Nikolaev, A.; Suchshev, S.; Ugarov, A.

    2003-04-01

    At present Systems for fast damage and loss assessment due to strong earthquakes may use as input data: (1) information about event parameters (magnitude, depth and coordinates) issued by Alert Seismological Surveys; (2) wave-form data obtained by strong-motion seismograph network; (3) high resolution space images of the affected area obtained before and after the event. When data about magnidute, depth and location of event are used to simulate possible consequences, the reliability of estimations depends on completeness and reliability of databases on elements at risk (population and built environment); reliability of vulnerability functions of elements at risk; and errors in strong earthquakes' parameters determination by Alert Seismological Surveys. Some of these factors may be taken into account at the expense of the System calibration with usage of well documented past strong earthquakes. The paper is describing the structure and content of the knowledge base about well documented strong events, which occurred in last century. It contains the description of more than 1000 events. The data are distributed almost homogeneously as the losses due to earthquakes are concerned; the most events are in the magnitude range 6.5 -7.9. Software is created to accumulate and analyze the information about these events source parameters and social consequences. Created knowledge base is used for calibration the Fast Damage Assessment Tool, which is at present on duty with the framework of EDRIM Program. It is also used as additional information by experts who analyses the results of computations.

  3. Automated system for fast and accurate analysis of SF6 injected in the surface ocean.

    PubMed

    Koo, Chul-Min; Lee, Kitack; Kim, Miok; Kim, Dae-Ok

    2005-11-01

    This paper describes an automated sampling and analysis system for the shipboard measurement of dissolved sulfur hexafluoride (SF6) in surface marine environments into which SF6 has been deliberately released. This underway system includes a gas chromatograph associated with an electron capture detector, a fast and highly efficient SF6-extraction device, a global positioning system, and a data acquisition system based on Visual Basic 6.0/C 6.0. This work is distinct from previous studies in that it quantifies the efficiency of the SF6-extraction device and its carryover effect and examines the effect of surfactant on the SF6-extraction efficiency. Measurements can be continuously performed on seawater samples taken from a seawater line installed onboard a research vessel. The system runs on an hourly cycle during which one set of four SF6 standards is measured and SF6 derived from the seawater stream is subsequently analyzed for the rest of each 1 h period. This state-of-art system was successfully used to trace a water mass carrying Cochlodinium polykrikoides, which causes harmful algal blooms (HAB) in the coastal waters of southern Korea. The successful application of this analysis system in tracing the HAB-infected water mass suggests that the SF6 detection method described in this paper will improve the quality of the future study of biogeochemical processes in the marine environment. PMID:16294883

  4. Formulation and optimization of fast dissolving intraoral drug delivery system for clobazam using response surface methodology

    PubMed Central

    Bala, Rajni; Khanna, Sushil; Pawar, Pravin K.

    2013-01-01

    Clobazam is a newer 1,5-benzodiazepine used for the treatment of epilepsy. It is better tolerated and less sedating than other benzodiazepines. Absorption of the drug can be impacted by oral fast dissolving dosage form; this may have implications for epilepsy in pediatrics and those having difficulty in swallowing tablets/capsules resulting in improved patient compliance. The purpose of the present investigation was to formulate and optimize clobazam oro-dissolving tablets by direct compression method using response surface methodology (RSM). Oro-dispersible tablets of clobazam were prepared by direct compression method using crospovidone (2-6%) as a superdisintegrant, microcrystalline cellulose (MCC) (20-40%) was used as diluents along with directly compressible mannitol to enhance mouth feel. A 32 full factorial design was applied to investigate the combined effect of two formulation variables: amount of crospovidone and MCC over the independent variables disintegration time, wetting time and percent drug release. Disintegration time showed by all formulations was found to be in the range of 24.3-193 s based on evaluation parameters the formulation containing 6% of crospovidone and 30% of MCC showed promising performance against all other formulations. The results demonstrated that the RSM could efficiently be applied for the formulation of clobazam oro-dispersible tablets; therefore, constitute an advance in the management of epileptic attacks. PMID:24083203

  5. Formulation and optimization of fast dissolving intraoral drug delivery system for clobazam using response surface methodology.

    PubMed

    Bala, Rajni; Khanna, Sushil; Pawar, Pravin K

    2013-07-01

    Clobazam is a newer 1,5-benzodiazepine used for the treatment of epilepsy. It is better tolerated and less sedating than other benzodiazepines. Absorption of the drug can be impacted by oral fast dissolving dosage form; this may have implications for epilepsy in pediatrics and those having difficulty in swallowing tablets/capsules resulting in improved patient compliance. The purpose of the present investigation was to formulate and optimize clobazam oro-dissolving tablets by direct compression method using response surface methodology (RSM). Oro-dispersible tablets of clobazam were prepared by direct compression method using crospovidone (2-6%) as a superdisintegrant, microcrystalline cellulose (MCC) (20-40%) was used as diluents along with directly compressible mannitol to enhance mouth feel. A 3(2) full factorial design was applied to investigate the combined effect of two formulation variables: amount of crospovidone and MCC over the independent variables disintegration time, wetting time and percent drug release. Disintegration time showed by all formulations was found to be in the range of 24.3-193 s based on evaluation parameters the formulation containing 6% of crospovidone and 30% of MCC showed promising performance against all other formulations. The results demonstrated that the RSM could efficiently be applied for the formulation of clobazam oro-dispersible tablets; therefore, constitute an advance in the management of epileptic attacks. PMID:24083203

  6. A fast image encryption algorithm based on chaotic map

    NASA Astrophysics Data System (ADS)

    Liu, Wenhao; Sun, Kehui; Zhu, Congxu

    2016-09-01

    Derived from Sine map and iterative chaotic map with infinite collapse (ICMIC), a new two-dimensional Sine ICMIC modulation map (2D-SIMM) is proposed based on a close-loop modulation coupling (CMC) model, and its chaotic performance is analyzed by means of phase diagram, Lyapunov exponent spectrum and complexity. It shows that this map has good ergodicity, hyperchaotic behavior, large maximum Lyapunov exponent and high complexity. Based on this map, a fast image encryption algorithm is proposed. In this algorithm, the confusion and diffusion processes are combined for one stage. Chaotic shift transform (CST) is proposed to efficiently change the image pixel positions, and the row and column substitutions are applied to scramble the pixel values simultaneously. The simulation and analysis results show that this algorithm has high security, low time complexity, and the abilities of resisting statistical analysis, differential, brute-force, known-plaintext and chosen-plaintext attacks.

  7. Cargo inspection system based on pulsed fast neutron analysis

    NASA Astrophysics Data System (ADS)

    Brown, Douglas R.

    1994-03-01

    This paper describes an automated cargo inspection system (CIS) based on pulsed fast neutron analysis (PFNA). The system uses a pulsed beam of fast neutrons to interrogate the contents of small volume elements--voxels--of a cargo container or truck. The neutrons interact with the elemental contents of each voxel and gamma rays characteristic of the elements are collected in an array of detectors. The elemental signals and their ratios give unique signatures for drugs, explosives, and contraband. From the time of arrival of the gamma rays, the position of the voxel within the truck is determined. Full-scale physics simulation of time-dependent neutron and gamma ray interactions in various cargo materials have aided in the design of the system. These simulations have been benchmarked against laboratory measurements. A scaled model of the PFNA CIS is in operation in SAIC's PFNA facility and has been used to demonstrate the detection of drugs and other contraband concealed in a full-size cargo container with a variety of contents. A full-scale system is presently being designed and fabricated for the U.S. Government's Cargo Container Inspection Technology Testbed at Tacoma, Washington. This system is designed to scan five or more trucks per hour and is scheduled to come into operation in July 1995.

  8. Fast Field Calibration of MIMU Based on the Powell Algorithm

    PubMed Central

    Ma, Lin; Chen, Wanwan; Li, Bin; You, Zheng; Chen, Zhigang

    2014-01-01

    The calibration of micro inertial measurement units is important in ensuring the precision of navigation systems, which are equipped with microelectromechanical system sensors that suffer from various errors. However, traditional calibration methods cannot meet the demand for fast field calibration. This paper presents a fast field calibration method based on the Powell algorithm. As the key points of this calibration, the norm of the accelerometer measurement vector is equal to the gravity magnitude, and the norm of the gyro measurement vector is equal to the rotational velocity inputs. To resolve the error parameters by judging the convergence of the nonlinear equations, the Powell algorithm is applied by establishing a mathematical error model of the novel calibration. All parameters can then be obtained in this manner. A comparison of the proposed method with the traditional calibration method through navigation tests shows the classic performance of the proposed calibration method. The proposed calibration method also saves more time compared with the traditional calibration method. PMID:25177801

  9. A PDE-Based Fast Local Level Set Method

    NASA Astrophysics Data System (ADS)

    Peng, Danping; Merriman, Barry; Osher, Stanley; Zhao, Hongkai; Kang, Myungjoo

    1999-11-01

    We develop a fast method to localize the level set method of Osher and Sethian (1988, J. Comput. Phys.79, 12) and address two important issues that are intrinsic to the level set method: (a) how to extend a quantity that is given only on the interface to a neighborhood of the interface; (b) how to reset the level set function to be a signed distance function to the interface efficiently without appreciably moving the interface. This fast local level set method reduces the computational effort by one order of magnitude, works in as much generality as the original one, and is conceptually simple and easy to implement. Our approach differs from previous related works in that we extract all the information needed from the level set function (or functions in multiphase flow) and do not need to find explicitly the location of the interface in the space domain. The complexity of our method to do tasks such as extension and distance reinitialization is O(N), where N is the number of points in space, not O(N log N) as in works by Sethian (1996, Proc. Nat. Acad. Sci. 93, 1591) and Helmsen and co-workers (1996, SPIE Microlithography IX, p. 253). This complexity estimation is also valid for quite general geometrically based front motion for our localized method.

  10. Dissociation dynamics of fast neutral molecules scattered under glancing incidence conditions from crystal surfaces

    NASA Astrophysics Data System (ADS)

    Snowdon, K. J.; Harder, R.; Nesbitt, A.

    1996-08-01

    When fast ( vthermal ≪ v < vFermi) neutral or ionised atoms or molecules are scattered under glancing incidence conditions from atomically smooth metal single crystal surfaces, translational energy losses of 0.1-1 eV per femtosecond or per Å of the trajectory in the near surface region are not atypical. A large fraction of this energy appears in the electron-hole pair excitation channel. In addition, the orientation distribution of the internuclear co-ordinate of dissociatively scattered molecules is often sharply peaked about the surface normal. Such a distribution could arise if, coincident with vibrational excitation of the intra-molecular co-ordinate, the molecules were preferentially aligned about the surface normal. Alternatively, such a distribution may arise if, following dissolution of the intra-molecular bond, the difference in the surface normal momentum transfer to the two unbound atoms considerably exceeds the difference in the surface parallel momentum transfer. We investigate these two possibilities within a classical simulation of energy transfer from the translational to internal degrees of freedom of the molecule via repeated transitions between different electronic states of the molecule-surface system. These simulations suggest that in general, the observed surface-normal aligned final orientation of dissociatively scattered molecules is caused by strong vibrational excitation in the entrance channel region of the adiabatic ground state potential energy surface describing the interaction of the neutral molecule with the surface.

  11. Fast Response and High Sensitivity ZnO/glass Surface Acoustic Wave Humidity Sensors Using Graphene Oxide Sensing Layer

    PubMed Central

    Xuan, Weipeng; He, Mei; Meng, Nan; He, Xingli; Wang, Wenbo; Chen, Jinkai; Shi, Tianjin; Hasan, Tawfique; Xu, Zhen; Xu, Yang; Luo, J. K.

    2014-01-01

    We report ZnO/glass surface acoustic wave (SAW) humidity sensors with high sensitivity and fast response using graphene oxide sensing layer. The frequency shift of the sensors is exponentially correlated to the humidity change, induced mainly by mass loading effect rather than the complex impedance change of the sensing layer. The SAW sensors show high sensitivity at a broad humidity range from 0.5%RH to 85%RH with < 1 sec rise time. The simple design and excellent stability of our GO-based SAW humidity sensors, complemented with full humidity range measurement, highlights their potential in a wide range of applications. PMID:25425458

  12. Effect of surface modes on coupling to fast waves in the LHRF

    SciTech Connect

    Pinsker, R.I.; Colestock, P.L.

    1990-09-16

    The effect of surface modes of propagation on coupling to fast waves in the LHRF is studied theoretically and experimentally. The previously reported up-down' poloidal phasing asymmetry for coupling to a uniform plasma is shown to be due to the properties of a mode which carries energy along the plasma-conducting wall interface. Comparison of the theory with coupling experiments performed on the PLT tokamak with a phased array of twelve dielectric-loaded waveguides at 800 MHz shows that the observed dependence of the net reflection coefficient on toroidal phase angle can be explained only if the surface wave is taken into account. 43 refs., 10 figs.

  13. Fast-response humidity-sensing films based on methylene blue aggregates formed on nanoporous semiconductor films

    NASA Astrophysics Data System (ADS)

    Ishizaki, Ryota; Katoh, Ryuzi

    2016-05-01

    We prepared fast-response colorimetric humidity-sensing (vapochromic) films based on methylene blue adsorption onto nanoporous semiconductor (TiO2, Al2O3) films. Color changes caused by changes of humidity could be easily identified visually. A characteristic feature of the vapochromic films was their fast response to changes of humidity. We found that the response began to occur within 10 ms. The response was rapid because all the methylene blue molecules attached to the nanoporous semiconductor surface were directly exposed to the environment. We also deduced that the color changes were caused by structural changes of the methylene blue aggregates on the surface.

  14. Fast Crystal Growth in o-Terphenyl Glasses: A Possible Role for Fracture and Surface Mobility.

    PubMed

    Powell, C Travis; Xi, Hanmi; Sun, Ye; Gunn, Erica; Chen, Yinshan; Ediger, M D; Yu, Lian

    2015-08-01

    Molecular liquids can develop a fast mode of crystal growth ("GC growth") near the glass transition temperature. This phenomenon remains imperfectly understood with several explanations proposed. We report that GC growth in o-terphenyl conserves the overall volume, despite a 5% higher density of the crystal, and produces fine crystal grains with the same unit cell as normally grown crystals. These results indicate that GC growth continuously creates voids and free surfaces, possibly by fracture. This aspect of the phenomenon has not been considered by previous treatments and is a difficulty for those models that hypothesize a 5% strain without voids. Given the existence of even faster crystal growth on the free surface of molecular glasses, we consider the possibility that GC growth is facilitated by fracture and surface mobility. This notion has support from the fact that GC growth and surface growth are both highly correlated with surface diffusivity and with fast crystal growth along preformed cracks in the glass. PMID:26161577

  15. The transport characteristics of passing fast ions produced by nonlocal overlapping of drift island surfaces and magnetic island surfaces

    NASA Astrophysics Data System (ADS)

    Cao, Jinjia; Gong, Xueyu; Xiang, Dong; Huang, Qianhong; Yu, Jun

    2016-08-01

    The structure of the drift-island surface of passing fast ions (PFIs) is investigated in the presence of the resonant interaction with a magnetic island. Two overlapping regions of the drift-island surface and the magnetic island surface are found, one corresponding to local overlapping region and the other to non-local one. Here, the word "nonlocal" denotes that the resonances in the core plasma can have effects on the PFIs near the plasma boundary, while the "local" represents that the PFIs just near the resonant location are influenced. The nonlocal overlapping constructs a transport path along which the PFIs can become losses. There are three kinds of drift-island surfaces to join in forming the transport paths. A pitch angle region, which is called pitch angle gap, is found near the plasma boundary, where the drift-island surface cannot be formed and few PFIs are lost. The pitch-angle selective features of PFI losses are obtained by analyzing the three kinds of drift-island surfaces. The coupling between the crowd drift island surfaces and the collision can induce the prompt losses of PFIs and rapidly slowing down of PFI energy. The time of the prompt losses and the slowing down rate are calculated. Qualitatively, the theoretical results are in well agreement with the experimental observations in ASDEX Upgrade [M. García-Muñoz et al., Nucl. Fusion 47, L10 (2007)].

  16. Scatterometry—fast and robust measurements of nano-textured surfaces

    NASA Astrophysics Data System (ADS)

    Hannibal Madsen, Morten; Hansen, Poul-Erik

    2016-06-01

    Scatterometry is a fast, precise and low cost way to determine the mean pitch and dimensional parameters of periodic structures with lateral resolution of a few nanometer. It is robust enough for in-line process control and precise and accurate enough for metrology measurements. Furthermore, scatterometry is a non-destructive technique capable of measuring buried structures, for example a grating covered by a thick oxide layer. As scatterometry is a non-imaging technique, mathematical modeling is needed to retrieve structural parameters that describe a surface. In this review, the three main steps of scatterometry are discussed: the data acquisition, the simulation of diffraction efficiencies and the comparison of data and simulations. First, the intensity of the diffracted light is measured with a scatterometer as a function of incoming angle, diffraction angle and/or wavelength. We discuss the evolution of the scatterometers from the earliest angular scatterometers to the new imaging scatterometers. The basic principle of measuring diffraction efficiencies in scatterometry has remained the same since the beginning, but the instrumental improvements have made scatterometry a state-of-the-art solution for fast and accurate measurements of nano-textured surfaces. The improvements include extending the wavelength range from the visible to the extreme ultra-violet range, development of Fourier optics to measure all diffraction orders simultaneously, and an imaging scatterometer to measure area of interests smaller than the spot size. Secondly, computer simulations of the diffraction efficiencies are discussed with emphasis on the rigorous coupled-wave analysis (RCWA) method. RCWA has, since the mid-1990s, been the preferred method for grating simulations due to the speed of the algorithms. In the beginning the RCWA method suffered from a very slow convergence rate, and we discuss the historical improvements to overcome this challenge, e.g. by the introduction of Li

  17. Fast complex memory polynomial-based adaptive digital predistorter

    NASA Astrophysics Data System (ADS)

    Singh Sappal, Amandeep; Singh Patterh, Manjeet; Sharma, Sanjay

    2011-07-01

    Today's 3G wireless systems require both high linearity and high power amplifier (PA) efficiency. The high peak-to-average ratios of the digital modulation schemes used in 3G wireless systems require that the RF PA maintain high linearity over a large range while maintaining this high efficiency; these two requirements are often at odds with each other with many of the traditional amplifier architectures. In this article, a fast and easy-to-implement adaptive digital predistorter has been presented for Wideband Code Division Multiplexed signals using complex memory polynomial work function. The proposed algorithm has been implemented to test a Motorola LDMOSFET PA. The proposed technique also takes care of the memory effects of the PA, which have been ignored in many proposed techniques in the literature. The results show that the new complex memory polynomial-based adaptive digital predistorter has better linearisation performance than conventional predistortion techniques.

  18. [Fast Implementation Method of Protein Spots Detection Based on CUDA].

    PubMed

    Xiong, Bangshu; Ye, Yijia; Ou, Qiaofeng; Zhang, Haodong

    2016-02-01

    In order to improve the efficiency of protein spots detection, a fast detection method based on CUDA was proposed. Firstly, the parallel algorithms of the three most time-consuming parts in the protein spots detection algorithm: image preprocessing, coarse protein point detection and overlapping point segmentation were studied. Then, according to single instruction multiple threads executive model of CUDA to adopted data space strategy of separating two-dimensional (2D) images into blocks, various optimizing measures such as shared memory and 2D texture memory are adopted in this study. The results show that the operative efficiency of this method is obviously improved compared to CPU calculation. As the image size increased, this method makes more improvement in efficiency, such as for the image with the size of 2,048 x 2,048, the method of CPU needs 52,641 ms, but the GPU needs only 4,384 ms. PMID:27382745

  19. Direct observation of ultrafast surface transport of laser-driven fast electrons in a solid target

    NASA Astrophysics Data System (ADS)

    Singh, Prashant Kumar; Cui, Y. Q.; Chatterjee, Gourab; Adak, Amitava; Wang, W. M.; Ahmed, Saima; Lad, Amit D.; Sheng, Z. M.; Ravindra Kumar, G.

    2013-11-01

    We demonstrate rapid spread of surface ionization on a glass target excited by an intense, ultrashort laser pulse at an intensity of 3 × 1017 W cm-2. Time- and space-resolved reflectivity of the target surface indicates that the initial plasma region created by the pump pulse expands at c/7. The measured quasi-static megagauss magnetic field is found to expand in a manner very similar to that of surface ionization. Two-dimensional particle-in-cell simulations reproduce measurements of surface ionization and magnetic fields. Both the experiment and simulation convincingly demonstrate the role of self-induced electric and magnetic fields in confining fast electrons along the target-vacuum interface.

  20. Direct observation of ultrafast surface transport of laser-driven fast electrons in a solid target

    SciTech Connect

    Singh, Prashant Kumar; Chatterjee, Gourab; Adak, Amitava; Ahmed, Saima; Lad, Amit D.; Ravindra Kumar, G.; Cui, Y. Q.; Wang, W. M.; Sheng, Z. M.

    2013-11-15

    We demonstrate rapid spread of surface ionization on a glass target excited by an intense, ultrashort laser pulse at an intensity of 3 × 10{sup 17} W cm{sup −2}. Time- and space-resolved reflectivity of the target surface indicates that the initial plasma region created by the pump pulse expands at c/7. The measured quasi-static megagauss magnetic field is found to expand in a manner very similar to that of surface ionization. Two-dimensional particle-in-cell simulations reproduce measurements of surface ionization and magnetic fields. Both the experiment and simulation convincingly demonstrate the role of self-induced electric and magnetic fields in confining fast electrons along the target-vacuum interface.

  1. Response surface methodology to optimize novel fast disintegrating tablets using β cyclodextrin as diluent.

    PubMed

    Late, Sameer G; Banga, Ajay K

    2010-12-01

    The objective of this work was to apply response surface approach to investigate main and interaction effects of formulation parameters in optimizing novel fast disintegrating tablet formulation using β cyclodextrin as a diluent. The variables studied were diluent (β cyclodextrin, X (1)), superdisintegrant (Croscarmellose sodium, X (2)), and direct compression aid (Spray dried lactose, X (3)). Tablets were prepared by direct compression method on B2 rotary tablet press using flat plain-face punches and characterized for weight variation, thickness, disintegration time (Y (1)), and hardness (Y (2)). Disintegration time was strongly affected by quadratic terms of β cyclodextrin, croscarmellose sodium, and spray-dried lactose. The positive value of regression coefficient for β cyclodextrin suggested that hardness increased with increased amount of β cyclodextrin. In general, disintegration of tablets has been reported to slow down with increase in hardness. However in the present study, higher concentration of β cyclodextrin was found to improve tablet hardness without increasing the disintegration time. Thus, β cyclodextrin is proposed as a suitable diluent to achieve fast disintegrating tablets with sufficient hardness. Good correlation between the predicted values and experimental data of the optimized formulation validated prognostic ability of response surface methodology in optimizing fast disintegrating tablets using β cyclodextrin as a diluent. PMID:21086083

  2. Reducing preoperative fasting time: A trend based on evidence

    PubMed Central

    de Aguilar-Nascimento, José Eduardo; Dock-Nascimento, Diana Borges

    2010-01-01

    Preoperative fasting is mandatory before anesthesia to reduce the risk of aspiration. However, the prescribed 6-8 h of fasting is usually prolonged to 12-16 h for various reasons. Prolonged fasting triggers a metabolic response that precipitates gluconeogenesis and increases the organic response to trauma. Various randomized trials and meta-analyses have consistently shown that is safe to reduce the preoperative fasting time with a carbohydrate-rich drink up to 2 h before surgery. Benefits related to this shorter preoperative fasting include the reduction of postoperative gastrointestinal discomfort and insulin resistance. New formulas containing amino acids such as glutamine and other peptides are being studied and are promising candidates to be used to reduce preoperative fasting time. PMID:21160851

  3. Measuring the Surface Motion of Fast-Moving Glaciers with Expendable, Low-Cost GPS (Invited)

    NASA Astrophysics Data System (ADS)

    Howat, I. M.; Behar, A. E.; Brown, A. K.

    2009-12-01

    The recent retreats and acceleration in flow speeds of marine-terminating glaciers around the globe have raised concern over the potential for rapid loss of ice and increased rates of sea level rise. The dynamics of these glaciers are poorly understood, partly due to the difficulty in obtaining observations of ice flow speed that can be compared to potentially important forcing variables, such as air and ocean temperatures or calving rates. The high flow speeds (often >10 m/day) and large strain rates the near the fronts of these glaciers result in extreme crevassing, making surface travel for instrument deployment impossible. Due to this impassibility, measurements of surface motion have come predominantly from optical surveying or repeat satellite or photographic imaging. Remote sensing methods are limited in spatial and temporal resolution and optical surveys require manual operation in the field and have limited range. In contrast, Global Positioning System (GPS ) receivers offer very high resolution and, once deployed, collect data autonomously. GPS has been used to measure glacier surface motion for over a decade. Dual-frequency systems can yield post-processed displacements with accuracies of 1 cm or less, with a temporal resolution of minutes. These observations have been critical for resolving the stick-slip motion of Antarctic ice streams and the controls on glacial “icequakes” in Greenland. These systems have been combined with satellite-based data telemetry systems to provide near real-time position data to any location. These systems, however, typically cost several thousands of dollars, preventing their deployment in situations with low or no probability of recovery. The few field programs that have deployed dual-frequency receivers on fast-moving glaciers retrieved the systems after only a few days to prevent loss. While some investigators may be able to absorb the cost of loss of these systems, large-scale deployments will require a more cost

  4. Fast background subtraction for moving cameras based on nonparametric models

    NASA Astrophysics Data System (ADS)

    Sun, Feng; Qin, Kaihuai; Sun, Wei; Guo, Huayuan

    2016-05-01

    In this paper, a fast background subtraction algorithm for freely moving cameras is presented. A nonparametric sample consensus model is employed as the appearance background model. The as-similar-as-possible warping technique, which obtains multiple homographies for different regions of the frame, is introduced to robustly estimate and compensate the camera motion between the consecutive frames. Unlike previous methods, our algorithm does not need any preprocess step for computing the dense optical flow or point trajectories. Instead, a superpixel-based seeded region growing scheme is proposed to extend the motion cue based on the sparse optical flow to the entire image. Then, a superpixel-based temporal coherent Markov random field optimization framework is built on the raw segmentations from the background model and the motion cue, and the final background/foreground labels are obtained using the graph-cut algorithm. Extensive experimental evaluations show that our algorithm achieves satisfactory accuracy, while being much faster than the state-of-the-art competing methods.

  5. Fast and Secure Chaos-Based Cryptosystem for Images

    NASA Astrophysics Data System (ADS)

    Farajallah, Mousa; El Assad, Safwan; Deforges, Olivier

    Nonlinear dynamic cryptosystems or chaos-based cryptosystems have been attracting a large amount of research since 1990. The critical aspect of cryptography is to face the growth of communication and to achieve the design of fast and secure cryptosystems. In this paper, we introduce three versions of a chaos-based cryptosystem based on a similar structure of the Zhang and Fridrich cryptosystems. Each version is composed of two layers: a confusion layer and a diffusion layer. The confusion layer is achieved by using a modified 2-D cat map to overcome the fixed-point problem and some other weaknesses, and also to increase the dynamic key space. The 32-bit logistic map is used as a diffusion layer for the first version, which is more robust than using it in 8-bit. In the other versions, the logistic map is replaced by a modified Finite Skew Tent Map (FSTM) for three reasons: to increase the nonlinearity properties of the diffusion layer, to overcome the fixed-point problem, and to increase the dynamic key space. Finally, all versions of the proposed cryptosystem are more resistant against known attacks and faster than Zhang cryptosystems. Moreover, the dynamic key space is much larger than the one used in Zhang cryptosystems. Performance and security analysis prove that the proposed cryptosystems are suitable for securing real-time applications.

  6. A fast image matching algorithm based on key points

    NASA Astrophysics Data System (ADS)

    Wang, Huilin; Wang, Ying; An, Ru; Yan, Peng

    2014-05-01

    Image matching is a very important technique in image processing. It has been widely used for object recognition and tracking, image retrieval, three-dimensional vision, change detection, aircraft position estimation, and multi-image registration. Based on the requirements of matching algorithm for craft navigation, such as speed, accuracy and adaptability, a fast key point image matching method is investigated and developed. The main research tasks includes: (1) Developing an improved celerity key point detection approach using self-adapting threshold of Features from Accelerated Segment Test (FAST). A method of calculating self-adapting threshold was introduced for images with different contrast. Hessian matrix was adopted to eliminate insecure edge points in order to obtain key points with higher stability. This approach in detecting key points has characteristics of small amount of computation, high positioning accuracy and strong anti-noise ability; (2) PCA-SIFT is utilized to describe key point. 128 dimensional vector are formed based on the SIFT method for the key points extracted. A low dimensional feature space was established by eigenvectors of all the key points, and each eigenvector was projected onto the feature space to form a low dimensional eigenvector. These key points were re-described by dimension-reduced eigenvectors. After reducing the dimension by the PCA, the descriptor was reduced to 20 dimensions from the original 128. This method can reduce dimensions of searching approximately near neighbors thereby increasing overall speed; (3) Distance ratio between the nearest neighbour and second nearest neighbour searching is regarded as the measurement criterion for initial matching points from which the original point pairs matched are obtained. Based on the analysis of the common methods (e.g. RANSAC (random sample consensus) and Hough transform cluster) used for elimination false matching point pairs, a heuristic local geometric restriction

  7. Fast Sampling-Based Whole-Genome Haplotype Block Recognition.

    PubMed

    Taliun, Daniel; Gamper, Johann; Leser, Ulf; Pattaro, Cristian

    2016-01-01

    Scaling linkage disequilibrium (LD) based haplotype block recognition to the entire human genome has always been a challenge. The best-known algorithm has quadratic runtime complexity and, even when sophisticated search space pruning is applied, still requires several days of computations. Here, we propose a novel sampling-based algorithm, called S-MIG (++), where the main idea is to estimate the area that most likely contains all haplotype blocks by sampling a very small number of SNP pairs. A subsequent refinement step computes the exact blocks by considering only the SNP pairs within the estimated area. This approach significantly reduces the number of computed LD statistics, making the recognition of haplotype blocks very fast. We theoretically and empirically prove that the area containing all haplotype blocks can be estimated with a very high degree of certainty. Through experiments on the 243,080 SNPs on chromosome 20 from the 1,000 Genomes Project, we compared our previous algorithm MIG (++) with the new S-MIG (++) and observed a runtime reduction from 2.8 weeks to 34.8 hours. In a parallelized version of the S-MIG (++) algorithm using 32 parallel processes, the runtime was further reduced to 5.1 hours. PMID:27045830

  8. Efficient Video Stitching Based on Fast Structure Deformation.

    PubMed

    Li, Jing; Xu, Wei; Zhang, Jianguo; Zhang, Maojun; Wang, Zhengming; Li, Xuelong

    2015-12-01

    In computer vision, video stitching is a very challenging problem. In this paper, we proposed an efficient and effective wide-view video stitching method based on fast structure deformation that is capable of simultaneously achieving quality stitching and computational efficiency. For a group of synchronized frames, firstly, an effective double-seam selection scheme is designed to search two distinct but structurally corresponding seams in the two original images. The seam location of the previous frame is further considered to preserve the interframe consistency. Secondly, along the double seams, 1-D feature detection and matching is performed to capture the structural relationship between the two adjacent views. Thirdly, after feature matching, we propose an efficient algorithm to linearly propagate the deformation vectors to eliminate structure misalignment. At last, image intensity misalignment is corrected by rapid gradient fusion based on the successive over relaxation iteration (SORI) solver. A principled solution to the initialization of the SORI significantly reduced the number of iterations required. We have compared favorably our method with seven state-of-the-art image and video stitching algorithms as well as traditional ones. Experimental results show that our method outperforms the existing ones compared in terms of overall stitching quality and computational efficiency. PMID:25561603

  9. Fast single image dehazing based on image fusion

    NASA Astrophysics Data System (ADS)

    Liu, Haibo; Yang, Jie; Wu, Zhengping; Zhang, Qingnian

    2015-01-01

    Images captured in foggy weather conditions often fade the colors and reduce the contrast of the observed objects. An efficient image fusion method is proposed to remove haze from a single input image. First, the initial medium transmission is estimated based on the dark channel prior. Second, the method adopts an assumption that the degradation level affected by haze of each region is the same, which is similar to the Retinex theory, and uses a simple Gaussian filter to get the coarse medium transmission. Then, pixel-level fusion is achieved between the initial medium transmission and coarse medium transmission. The proposed method can recover a high-quality haze-free image based on the physical model, and the complexity of the proposed method is only a linear function of the number of input image pixels. Experimental results demonstrate that the proposed method can allow a very fast implementation and achieve better restoration for visibility and color fidelity compared to some state-of-the-art methods.

  10. Biased Randomized Algorithm for Fast Model-Based Diagnosis

    NASA Technical Reports Server (NTRS)

    Williams, Colin; Vartan, Farrokh

    2005-01-01

    A biased randomized algorithm has been developed to enable the rapid computational solution of a propositional- satisfiability (SAT) problem equivalent to a diagnosis problem. The closest competing methods of automated diagnosis are described in the preceding article "Fast Algorithms for Model-Based Diagnosis" and "Two Methods of Efficient Solution of the Hitting-Set Problem" (NPO-30584), which appears elsewhere in this issue. It is necessary to recapitulate some of the information from the cited articles as a prerequisite to a description of the present method. As used here, "diagnosis" signifies, more precisely, a type of model-based diagnosis in which one explores any logical inconsistencies between the observed and expected behaviors of an engineering system. The function of each component and the interconnections among all the components of the engineering system are represented as a logical system. Hence, the expected behavior of the engineering system is represented as a set of logical consequences. Faulty components lead to inconsistency between the observed and expected behaviors of the system, represented by logical inconsistencies. Diagnosis - the task of finding the faulty components - reduces to finding the components, the abnormalities of which could explain all the logical inconsistencies. One seeks a minimal set of faulty components (denoted a minimal diagnosis), because the trivial solution, in which all components are deemed to be faulty, always explains all inconsistencies. In the methods of the cited articles, the minimal-diagnosis problem is treated as equivalent to a minimal-hitting-set problem, which is translated from a combinatorial to a computational problem by mapping it onto the Boolean-satisfiability and integer-programming problems. The integer-programming approach taken in one of the prior methods is complete (in the sense that it is guaranteed to find a solution if one exists) and slow and yields a lower bound on the size of the

  11. Improving the quantitative testing of fast aspherics surfaces with null screen using Dijkstra algorithm

    NASA Astrophysics Data System (ADS)

    Moreno Oliva, Víctor Iván; Castañeda Mendoza, Álvaro; Campos García, Manuel; Díaz Uribe, Rufino

    2011-09-01

    The null screen is a geometric method that allows the testing of fast aspherical surfaces, this method measured the local slope at the surface and by numerical integration the shape of the surface is measured. The usual technique for the numerical evaluation of the surface is the trapezoidal rule, is well-known fact that the truncation error increases with the second power of the spacing between spots of the integration path. Those paths are constructed following spots reflected on the surface and starting in an initial select spot. To reduce the numerical errors in this work we propose the use of the Dijkstra algorithm.1 This algorithm can find the shortest path from one spot (or vertex) to another spot in a weighted connex graph. Using a modification of the algorithm it is possible to find the minimal path from one select spot to all others ones. This automates and simplifies the integration process in the test with null screens. In this work is shown the efficient proposed evaluating a previously surface with a traditional process.

  12. Fast inspection of bulk and surface defects of large aperture optics in high power lasers

    NASA Astrophysics Data System (ADS)

    Zhao, Yuan'an; Hu, Guohang; Liu, Shijie; Yi, Kui; Shao, Jianda

    2015-05-01

    Laser induced damage for nanosecond pulse duration is attributed to the existence of defects. The growth and polishing, as well as coating deposition, may induce versatile kinds of defects, including dig, scratch and inclusion. It is special important to get the information of the defects, such as size and location, which is the basis to know the origin of the defects and figures out effective techniques to eliminate it. It is quite easy to get the information of the defects with micron-level resolution, but it is time-consuming and is not suitable for fast inspection of the large aperture (hundreds of millimeters). In this work, on-the-fly image capture technique was employed to realize fast inspection of large aperture optics. A continuous green laser was employed as illumination source to enhance and enlarge the image of bulk defects. So it could detect the submicron-scale defects. A transmission microscopy with white light illumination was employed to detect the surface defect. Its field of view was about 2.8mm×1.6mm. The sample was raster scanned driving by a stepper motor through the stationary illumination laser and digital camera, and the speed to scan the sample was about 10mm/s. The results of large aperture optics proved the functions of this fast inspection technique.

  13. Fast CEUS image segmentation based on self organizing maps

    NASA Astrophysics Data System (ADS)

    Paire, Julie; Sauvage, Vincent; Albouy-Kissi, Adelaïde; Ladam Marcus, Viviane; Marcus, Claude; Hoeffel, Christine

    2014-03-01

    Contrast-enhanced ultrasound (CEUS) has recently become an important technology for lesion detection and characterization. CEUS is used to investigate the perfusion kinetics in tissue over time, which relates to tissue vascularization. In this paper, we present an interactive segmentation method based on the neural networks, which enables to segment malignant tissue over CEUS sequences. We use Self-Organizing-Maps (SOM), an unsupervised neural network, to project high dimensional data to low dimensional space, named a map of neurons. The algorithm gathers the observations in clusters, respecting the topology of the observations space. This means that a notion of neighborhood between classes is defined. Adjacent observations in variables space belong to the same class or related classes after classification. Thanks to this neighborhood conservation property and associated with suitable feature extraction, this map provides user friendly segmentation tool. It will assist the expert in tumor segmentation with fast and easy intervention. We implement SOM on a Graphics Processing Unit (GPU) to accelerate treatment. This allows a greater number of iterations and the learning process to converge more precisely. We get a better quality of learning so a better classification. Our approach allows us to identify and delineate lesions accurately. Our results show that this method improves markedly the recognition of liver lesions and opens the way for future precise quantification of contrast enhancement.

  14. DUK - A Fast and Efficient Kmer Based Sequence Matching Tool

    SciTech Connect

    Li, Mingkun; Copeland, Alex; Han, James

    2011-03-21

    A new tool, DUK, is developed to perform matching task. Matching is to find whether a query sequence partially or totally matches given reference sequences or not. Matching is similar to alignment. Indeed many traditional analysis tasks like contaminant removal use alignment tools. But for matching, there is no need to know which bases of a query sequence matches which position of a reference sequence, it only need know whether there exists a match or not. This subtle difference can make matching task much faster than alignment. DUK is accurate, versatile, fast, and has efficient memory usage. It uses Kmer hashing method to index reference sequences and Poisson model to calculate p-value. DUK is carefully implemented in C++ in object oriented design. The resulted classes can also be used to develop other tools quickly. DUK have been widely used in JGI for a wide range of applications such as contaminant removal, organelle genome separation, and assembly refinement. Many real applications and simulated dataset demonstrate its power.

  15. Fast recognition of musical sounds based on timbre.

    PubMed

    Agus, Trevor R; Suied, Clara; Thorpe, Simon J; Pressnitzer, Daniel

    2012-05-01

    Human listeners seem to have an impressive ability to recognize a wide variety of natural sounds. However, there is surprisingly little quantitative evidence to characterize this fundamental ability. Here the speed and accuracy of musical-sound recognition were measured psychophysically with a rich but acoustically balanced stimulus set. The set comprised recordings of notes from musical instruments and sung vowels. In a first experiment, reaction times were collected for three target categories: voice, percussion, and strings. In a go/no-go task, listeners reacted as quickly as possible to members of a target category while withholding responses to distractors (a diverse set of musical instruments). Results showed near-perfect accuracy and fast reaction times, particularly for voices. In a second experiment, voices were recognized among strings and vice-versa. Again, reaction times to voices were faster. In a third experiment, auditory chimeras were created to retain only spectral or temporal features of the voice. Chimeras were recognized accurately, but not as quickly as natural voices. Altogether, the data suggest rapid and accurate neural mechanisms for musical-sound recognition based on selectivity to complex spectro-temporal signatures of sound sources. PMID:22559384

  16. [Fast discrimination of edible vegetable oil based on Raman spectroscopy].

    PubMed

    Zhou, Xiu-Jun; Dai, Lian-Kui; Li, Sheng

    2012-07-01

    A novel method to fast discriminate edible vegetable oils by Raman spectroscopy is presented. The training set is composed of different edible vegetable oils with known classes. Based on their original Raman spectra, baseline correction and normalization were applied to obtain standard spectra. Two characteristic peaks describing the unsaturated degree of vegetable oil were selected as feature vectors; then the centers of all classes were calculated. For an edible vegetable oil with unknown class, the same pretreatment and feature extraction methods were used. The Euclidian distances between the feature vector of the unknown sample and the center of each class were calculated, and the class of the unknown sample was finally determined by the minimum distance. For 43 edible vegetable oil samples from seven different classes, experimental results show that the clustering effect of each class was more obvious and the class distance was much larger with the new feature extraction method compared with PCA. The above classification model can be applied to discriminate unknown edible vegetable oils rapidly and accurately. PMID:23016334

  17. Fast 3D reconstruction of tool wear based on monocular vision and multi-color structured light illuminator

    NASA Astrophysics Data System (ADS)

    Wang, Zhongren; Li, Bo; Zhou, Yuebin

    2014-11-01

    Fast 3D reconstruction of tool wear from 2D images has great importance to 3D measuring and objective evaluating tool wear condition, determining accurate tool change and insuring machined part's quality. Extracting 3D information of tool wear zone based on monocular multi-color structured light can realize fast recovery of surface topography of tool wear, which overcomes the problems of traditional methods such as solution diversity and slow convergence when using SFS method and stereo match when using 3D reconstruction from multiple images. In this paper, a kind of new multi-color structured light illuminator was put forward. An information mapping model was established among illuminator's structure parameters, surface morphology and color images. The mathematical model to reconstruct 3D morphology based on monocular multi-color structured light was presented. Experimental results show that this method is effective and efficient to reconstruct the surface morphology of tool wear zone.

  18. A surface data generation method of optical micro-structure and analysis system for Fast Tool Servo fabricating

    NASA Astrophysics Data System (ADS)

    Yang, Fan; Dai, Yi-fan; Wan, Fei; Wang, Gui-lin

    2010-10-01

    High-precision optical micro-structured components are now widely used in the field of military and civilian use. Ultraprecision machining with a fast tool servo (FTS) is one of the leading methodologies for fabrication of such surfaces. The first important issue that faced in ultra-precision and high-effectively fabricating is how to properly describe the complex shapes based on the principle of FTS. In order to meet the demands of FTS machining that need for tool high-frequency response, high data throughput and huge memory space, an off-line discrete data points generation method for microstructure surfaces is presented which can avoid on-line shape calculation in fabricating process. A new analysis software package is developed to compute the speed, acceleration and spectrum over the generated data points which helps to analysis the tool tracking characteristics needed in fabricating. Also a new mechanism for FTS machining data transmission based on the huge-capacity storage device is proposed. Experiments show that the off-line surface data generation method and data transfer mechanism can effectively improve FTS fabricating efficiency, the surface analysis software can help to determine the machining ability of tool-holder and to guide and optimize the processing parameters such as spindle speed, feed rate, etc.

  19. Nanorod-Based Fast-Response Pressure-Sensitive Paints

    NASA Technical Reports Server (NTRS)

    Bencic, Timothy; VanderWal, Randall

    2007-01-01

    A proposed program of research and development would be devoted to exploitation of nanomaterials in pressuresensitive paints (PSPs), which are used on wind-tunnel models for mapping surface pressures associated with flow fields. Heretofore, some success has been achieved in measuring steady-state pressures by use of PSPs, but success in measuring temporally varying pressures has been elusive because of the inherent slowness of the optical responses of these materials. A PSP contains a dye that luminesces in a suitable wavelength range in response to photoexcitation in a shorter wavelength range. The luminescence is quenched by oxygen at a rate proportional to the partial pressure of oxygen and thus proportional to the pressure of air. As a result, the intensity of luminescence varies inversely with the pressure of air. The major problem in developing a PSP that could be easily applied to a wind-tunnel model and could be useful for measuring rapidly varying pressure is to provide very high gas diffusivity for rapid, easy transport of oxygen to and from active dye molecules. Most PSPs include polymer-base binders, which limit the penetration of oxygen to dye molecules, thereby reducing responses to pressure fluctuations. The proposed incorporation of nanomaterials (somewhat more specifically, nanorods) would result in paints having nanostructured surfaces that, relative to conventional PSP surfaces, would afford easier and more nearly complete access of oxygen molecules to dye molecules. One measure of greater access is effective surface area: For a typical PSP as proposed applied to a given solid surface, the nanometer-scale structural features would result in an exposed surface area more than 100 times that of a conventional PSP, and the mass of proposed PSP needed to cover the surface would be less than tenth of the mass of the conventional PSP. One aspect of the proposed development would be to synthesize nanorods of Si/SiO2, in both tangle-mat and regular- array

  20. Integrated Ray Tracing (IRT) simulation of SCOTS measurement of GMT fast steering mirror surface

    NASA Astrophysics Data System (ADS)

    Choi, Ji Nyeong; Ryu, Dongok; Kim, Sug-Whan; Graves, Logan; Su, Peng; Huang, Run; Kim, Dae Wook

    2015-09-01

    The Software Configurable Optical Testing System (SCOTS) is one of the newest testing methods for large mirror surfaces. The Integrated Ray Tracing (IRT) technique can be applicable to the SCOTS simulation by performing non-sequential ray tracing from the screen to the camera detector in the real scale. Therefore, the radiometry of distorted pattern images are numerically estimated by the IRT simulation module. In this study, we construct an IRT SCOTS simulation model for the Fast Steering Mirror Prototype (FSMP) surface of the Giant Magellan Telescope (GMT). GMT FSMP is an off-axis ellipsoidal concave mirror that is 1064 mm in diameter and has PV 3.1 mm in aspheric departure. The surface error requirement is less than 20 nm rms. The screen is modeled as an array of 1366 by 768 screen pixels of 0.227 mm in pitch size. The screen is considered as a Lambertian scattering surface. The screen and the camera are positioned around 4390 mm away from the mirror and separated by around 132 mm from each other. The light source are scanning lines and sinusoidal patterns generated by 616,050 rays per one screen pixel. Of the initially generated rays, 0.22 % are received by the camera's detector and contribute to form distorted pattern images. These images are converted to the slope and height maps of the mirror surface. The final result for the height difference between input surface and reconstructed surface was 14.14 nm rms. Additionally, the simulated mirror pattern image was compared with the real SCOTS test for the GMT FSMP. This study shows applicability of using the IRT model to SCOTS simulation with nanometer level numerical accuracy.

  1. Fast parallel algorithm for slicing STL based on pipeline

    NASA Astrophysics Data System (ADS)

    Ma, Xulong; Lin, Feng; Yao, Bo

    2016-04-01

    In Additive Manufacturing field, the current researches of data processing mainly focus on a slicing process of large STL files or complicated CAD models. To improve the efficiency and reduce the slicing time, a parallel algorithm has great advantages. However, traditional algorithms can't make full use of multi-core CPU hardware resources. In the paper, a fast parallel algorithm is presented to speed up data processing. A pipeline mode is adopted to design the parallel algorithm. And the complexity of the pipeline algorithm is analyzed theoretically. To evaluate the performance of the new algorithm, effects of threads number and layers number are investigated by a serial of experiments. The experimental results show that the threads number and layers number are two remarkable factors to the speedup ratio. The tendency of speedup versus threads number reveals a positive relationship which greatly agrees with the Amdahl's law, and the tendency of speedup versus layers number also keeps a positive relationship agreeing with Gustafson's law. The new algorithm uses topological information to compute contours with a parallel method of speedup. Another parallel algorithm based on data parallel is used in experiments to show that pipeline parallel mode is more efficient. A case study at last shows a suspending performance of the new parallel algorithm. Compared with the serial slicing algorithm, the new pipeline parallel algorithm can make full use of the multi-core CPU hardware, accelerate the slicing process, and compared with the data parallel slicing algorithm, the new slicing algorithm in this paper adopts a pipeline parallel model, and a much higher speedup ratio and efficiency is achieved.

  2. Characterization of a GEM-based fast neutron detector

    NASA Astrophysics Data System (ADS)

    Esposito, B.; Marocco, D.; Villari, R.; Murtas, F.; Rodionov, R.

    2014-03-01

    The neutron efficiency of a Gas Electron Multiplier (GEM)-based detector designed for fast neutron measurements in fusion devices was determined through the combined use of Monte Carlo (MCNPX) calculations and analysis of deuterium-deuterium and deuterium-tritium neutron irradiation experiments. The detector, characterized by a triple GEM structure flushed with a Ar/CO2/CF4 - 45/15/40 gas mixture, features a digital read-out system and has two sub-units for the detection of 2.5+14 MeV neutrons and 14 MeV neutrons (UDD and UDT, respectively). The pulse height spectra (PHS) determined from the curves of experimental efficiency as a function of the detector's high voltage (HV) and the MCNPX-simulated PHS were compared using a fitting routine that finds the best match between the experimental and simulated PHS by assuming a parametric model for the relation between HV (that determines the detector's gain) and the energy deposited in the gas. This led to express the experimental neutron efficiency as a function of the discrimination level set on the deposited energy (energy threshold). The detector sensitivity to γ-rays was also analyzed and the operational range in which the γ-ray contribution to the signal is not negligible was determined. It is found that this detector can reach a maximum neutron efficiency of ~1×10-3 counts/n at 2.5 MeV (UDD sub-unit) and of ~4×10-3 counts/n at 14 MeV (UDT and UDD sub-units).

  3. Fast parallel algorithm for slicing STL based on pipeline

    NASA Astrophysics Data System (ADS)

    Ma, Xulong; Lin, Feng; Yao, Bo

    2016-05-01

    In Additive Manufacturing field, the current researches of data processing mainly focus on a slicing process of large STL files or complicated CAD models. To improve the efficiency and reduce the slicing time, a parallel algorithm has great advantages. However, traditional algorithms can't make full use of multi-core CPU hardware resources. In the paper, a fast parallel algorithm is presented to speed up data processing. A pipeline mode is adopted to design the parallel algorithm. And the complexity of the pipeline algorithm is analyzed theoretically. To evaluate the performance of the new algorithm, effects of threads number and layers number are investigated by a serial of experiments. The experimental results show that the threads number and layers number are two remarkable factors to the speedup ratio. The tendency of speedup versus threads number reveals a positive relationship which greatly agrees with the Amdahl's law, and the tendency of speedup versus layers number also keeps a positive relationship agreeing with Gustafson's law. The new algorithm uses topological information to compute contours with a parallel method of speedup. Another parallel algorithm based on data parallel is used in experiments to show that pipeline parallel mode is more efficient. A case study at last shows a suspending performance of the new parallel algorithm. Compared with the serial slicing algorithm, the new pipeline parallel algorithm can make full use of the multi-core CPU hardware, accelerate the slicing process, and compared with the data parallel slicing algorithm, the new slicing algorithm in this paper adopts a pipeline parallel model, and a much higher speedup ratio and efficiency is achieved.

  4. Fast degradable citrate-based bone scaffold promotes spinal fusion

    PubMed Central

    Tang, Jiajun; Guo, Jinshan; Li, Zhen; Yang, Cheng; Xie, Denghui; Chen, Jian; Li, Shengfa; Li, Shaolin; Kim, Gloria B.; Bai, Xiaochun; Zhang, Zhongmin; Yang, Jian

    2015-01-01

    It is well known that high rates of fusion failure and pseudoarthrosis development (5~35%) are concomitant in spinal fusion surgery, which was ascribed to the shortage of suitable materials for bone regeneration. Citrate was recently recognized to play an indispensable role in enhancing osteconductivity and osteoinductivity, and promoting bone formation. To address the material challenges in spinal fusion surgery, we have synthesized mechanically robust and fast degrading citrate-based polymers by incorporating N-methyldiethanolamine (MDEA) into clickable poly(1, 8-octanediol citrates) (POC-click), referred to as POC-M-click. The obtained POC-M-click were fabricated into POC-M-click-HA matchstick scaffolds by compositing with hydroxyapatite (HA) for interbody spinal fusion in a rabbit model. Spinal fusion was analyzed by radiography, manual palpation, biomechanical testing, and histological evaluation. At 4 and 8 weeks post surgery, POC-M-click-HA scaffolds presented optimal degradation rates that facilitated faster new bone formation and higher spinal fusion rates (11.2±3.7, 80±4.5 at week 4 and 8, respectively) than the poly(L-lactic acid)-HA (PLLA-HA) control group (9.3±2.4 and 71.1±4.4) (p<0.05). The POC-M-click-HA scaffold-fused vertebrates possessed a maximum load and stiffness of 880.8±14.5 N and 843.2±22.4 N/mm, respectively, which were also much higher than those of the PLLA-HA group (maximum: 712.0±37.5 N, stiffness: 622.5±28.4 N/mm, p<0.05). Overall, the results suggest that POC-M-click-HA scaffolds could potentially serve as promising bone grafts for spinal fusion applications. PMID:26213625

  5. Coupled slow and fast surface dynamics in an electrocatalytic oscillator: Model and simulations

    SciTech Connect

    Nascimento, Melke A.; Nagao, Raphael; Eiswirth, Markus; Varela, Hamilton

    2014-12-21

    The co-existence of disparate time scales is pervasive in many systems. In particular for surface reactions, it has been shown that the long-term evolution of the core oscillator is decisively influenced by slow surface changes, such as progressing deactivation. Here we present an in-depth numerical investigation of the coupled slow and fast surface dynamics in an electrocatalytic oscillator. The model consists of four nonlinear coupled ordinary differential equations, investigated over a wide parameter range. Besides the conventional bifurcation analysis, the system was studied by means of high-resolution period and Lyapunov diagrams. It was observed that the bifurcation diagram changes considerably as the irreversible surface poisoning evolves, and the oscillatory region shrinks. The qualitative dynamics changes accordingly and the chaotic oscillations are dramatically suppressed. Nevertheless, periodic cascades are preserved in a confined region of the resistance vs. voltage diagram. Numerical results are compared to experiments published earlier and the latter reinterpreted. Finally, the comprehensive description of the time-evolution in the period and Lyapunov diagrams suggests further experimental studies correlating the evolution of the system's dynamics with changes of the catalyst structure.

  6. Coupled slow and fast surface dynamics in an electrocatalytic oscillator: Model and simulations

    NASA Astrophysics Data System (ADS)

    Nascimento, Melke A.; Nagao, Raphael; Eiswirth, Markus; Varela, Hamilton

    2014-12-01

    The co-existence of disparate time scales is pervasive in many systems. In particular for surface reactions, it has been shown that the long-term evolution of the core oscillator is decisively influenced by slow surface changes, such as progressing deactivation. Here we present an in-depth numerical investigation of the coupled slow and fast surface dynamics in an electrocatalytic oscillator. The model consists of four nonlinear coupled ordinary differential equations, investigated over a wide parameter range. Besides the conventional bifurcation analysis, the system was studied by means of high-resolution period and Lyapunov diagrams. It was observed that the bifurcation diagram changes considerably as the irreversible surface poisoning evolves, and the oscillatory region shrinks. The qualitative dynamics changes accordingly and the chaotic oscillations are dramatically suppressed. Nevertheless, periodic cascades are preserved in a confined region of the resistance vs. voltage diagram. Numerical results are compared to experiments published earlier and the latter reinterpreted. Finally, the comprehensive description of the time-evolution in the period and Lyapunov diagrams suggests further experimental studies correlating the evolution of the system's dynamics with changes of the catalyst structure.

  7. A Randomized Field Trial of the Fast ForWord Language Computer-Based Training Program

    ERIC Educational Resources Information Center

    Borman, Geoffrey D.; Benson, James G.; Overman, Laura

    2009-01-01

    This article describes an independent assessment of the Fast ForWord Language computer-based training program developed by Scientific Learning Corporation. Previous laboratory research involving children with language-based learning impairments showed strong effects on their abilities to recognize brief and fast sequences of nonspeech and speech…

  8. Fast Object Motion Estimation Based on Dynamic Stixels.

    PubMed

    Morales, Néstor; Morell, Antonio; Toledo, Jonay; Acosta, Leopoldo

    2016-01-01

    The stixel world is a simplification of the world in which obstacles are represented as vertical instances, called stixels, standing on a surface assumed to be planar. In this paper, previous approaches for stixel tracking are extended using a two-level scheme. In the first level, stixels are tracked by matching them between frames using a bipartite graph in which edges represent a matching cost function. Then, stixels are clustered into sets representing objects in the environment. These objects are matched based on the number of stixels paired inside them. Furthermore, a faster, but less accurate approach is proposed in which only the second level is used. Several configurations of our method are compared to an existing state-of-the-art approach to show how our methodology outperforms it in several areas, including an improvement in the quality of the depth reconstruction. PMID:27483265

  9. A ZnO nanowire-based photo-inverter with pulse-induced fast recovery

    NASA Astrophysics Data System (ADS)

    Ali Raza, Syed Raza; Lee, Young Tack; Hosseini Shokouh, Seyed Hossein; Ha, Ryong; Choi, Heon-Jin; Im, Seongil

    2013-10-01

    We demonstrate a fast response photo-inverter comprised of one transparent gated ZnO nanowire field-effect transistor (FET) and one opaque FET respectively as the driver and load. Under ultraviolet (UV) light the transfer curve of the transparent gate FET shifts to the negative side and so does the voltage transfer curve (VTC) of the inverter. After termination of UV exposure the recovery of photo-induced current takes a long time in general. This persistent photoconductivity (PPC) is due to hole trapping on the surface of ZnO NWs. Here, we used a positive voltage short pulse after UV exposure, for the first time resolving the PPC issue in nanowire-based photo-detectors by accumulating electrons at the ZnO/dielectric interface. We found that a pulse duration as small as 200 ns was sufficient to reach a full recovery to the dark state from the UV induced state, realizing a fast UV detector with a voltage output.We demonstrate a fast response photo-inverter comprised of one transparent gated ZnO nanowire field-effect transistor (FET) and one opaque FET respectively as the driver and load. Under ultraviolet (UV) light the transfer curve of the transparent gate FET shifts to the negative side and so does the voltage transfer curve (VTC) of the inverter. After termination of UV exposure the recovery of photo-induced current takes a long time in general. This persistent photoconductivity (PPC) is due to hole trapping on the surface of ZnO NWs. Here, we used a positive voltage short pulse after UV exposure, for the first time resolving the PPC issue in nanowire-based photo-detectors by accumulating electrons at the ZnO/dielectric interface. We found that a pulse duration as small as 200 ns was sufficient to reach a full recovery to the dark state from the UV induced state, realizing a fast UV detector with a voltage output. Electronic supplementary information (ESI) available. See DOI: 10.1039/c3nr03801g

  10. A fast and reliable readout method for quantitative analysis of surface-enhanced Raman scattering nanoprobes on chip surface

    NASA Astrophysics Data System (ADS)

    Chang, Hyejin; Kang, Homan; Jeong, Sinyoung; Ko, Eunbyeol; Lee, Yoon-Sik; Lee, Ho-Young; Jeong, Dae Hong

    2015-05-01

    Surface-enhanced Raman scattering techniques have been widely used for bioanalysis due to its high sensitivity and multiplex capacity. However, the point-scanning method using a micro-Raman system, which is the most common method in the literature, has a disadvantage of extremely long measurement time for on-chip immunoassay adopting a large chip area of approximately 1-mm scale and confocal beam point of ca. 1-μm size. Alternative methods such as sampled spot scan with high confocality and large-area scan method with enlarged field of view and low confocality have been utilized in order to minimize the measurement time practically. In this study, we analyzed the two methods in respect of signal-to-noise ratio and sampling-led signal fluctuations to obtain insights into a fast and reliable readout strategy. On this basis, we proposed a methodology for fast and reliable quantitative measurement of the whole chip area. The proposed method adopted a raster scan covering a full area of 100 μm × 100 μm region as a proof-of-concept experiment while accumulating signals in the CCD detector for single spectrum per frame. One single scan with 10 s over 100 μm × 100 μm area yielded much higher sensitivity compared to sampled spot scanning measurements and no signal fluctuations attributed to sampled spot scan. This readout method is able to serve as one of key technologies that will bring quantitative multiplexed detection and analysis into practice.

  11. A fast and reliable readout method for quantitative analysis of surface-enhanced Raman scattering nanoprobes on chip surface

    SciTech Connect

    Chang, Hyejin; Jeong, Sinyoung; Ko, Eunbyeol; Jeong, Dae Hong E-mail: debobkr@gmail.com; Kang, Homan; Lee, Yoon-Sik E-mail: debobkr@gmail.com; Lee, Ho-Young E-mail: debobkr@gmail.com

    2015-05-15

    Surface-enhanced Raman scattering techniques have been widely used for bioanalysis due to its high sensitivity and multiplex capacity. However, the point-scanning method using a micro-Raman system, which is the most common method in the literature, has a disadvantage of extremely long measurement time for on-chip immunoassay adopting a large chip area of approximately 1-mm scale and confocal beam point of ca. 1-μm size. Alternative methods such as sampled spot scan with high confocality and large-area scan method with enlarged field of view and low confocality have been utilized in order to minimize the measurement time practically. In this study, we analyzed the two methods in respect of signal-to-noise ratio and sampling-led signal fluctuations to obtain insights into a fast and reliable readout strategy. On this basis, we proposed a methodology for fast and reliable quantitative measurement of the whole chip area. The proposed method adopted a raster scan covering a full area of 100 μm × 100 μm region as a proof-of-concept experiment while accumulating signals in the CCD detector for single spectrum per frame. One single scan with 10 s over 100 μm × 100 μm area yielded much higher sensitivity compared to sampled spot scanning measurements and no signal fluctuations attributed to sampled spot scan. This readout method is able to serve as one of key technologies that will bring quantitative multiplexed detection and analysis into practice.

  12. Fast generation model of high density surface EMG signals in a cylindrical conductor volume.

    PubMed

    Carriou, Vincent; Boudaoud, Sofiane; Laforet, Jeremy; Ayachi, Fouaz Sofiane

    2016-07-01

    In the course of the last decade, fast and qualitative computing power developments have undoubtedly permitted for a better and more realistic modeling of complex physiological processes. Due to this favorable environment, a fast, generic and reliable model for high density surface electromyographic (HD-sEMG) signal generation with a multilayered cylindrical description of the volume conductor is presented in this study. Its main peculiarity lies in the generation of a high resolution potential map over the skin related to active Motor Units (MUs). Indeed, the analytical calculus is fully performed in the frequency domain. HD-sEMG signals are obtained by surfacic numerical integration of the generated high resolution potential map following a variety of electrode shapes. The suggested model is implemented using parallel computing techniques as well as by using an object-oriented approach which is comprehensive enough to be fairly quickly understood, used and potentially upgraded. To illustrate the model abilities, several simulation analyses are put forward in the results section. These simulations have been performed on the same muscle anatomy while varying the number of processes in order to show significant speed improvement. Accuracy of the numerical integration method, illustrating electrode shape diversity, is also investigated in comparison to analytical transfer functions definition. An additional section provides an insight on the volume detection of a circular electrode according to its radius. Furthermore, a large scale simulation is introduced with 300MUs in the muscle and a HD-sEMG electrode grid composed of 16×16 electrodes for three constant isometric contractions in 12s. Finally, advantages and limitations of the proposed model are discussed with a focus on perspective works. PMID:27183535

  13. Fast in situ phase and stress analysis during laser surface treatment: a synchrotron x-ray diffraction approach.

    PubMed

    Kostov, V; Gibmeier, J; Wilde, F; Staron, P; Rössler, R; Wanner, A

    2012-11-01

    An in situ stress analysis by means of synchrotron x-ray diffraction was carried out during laser surface hardening of steel. A single exposure set-up that based on a special arrangement of two fast silicon strip line detectors was established, allowing for fast stress analysis according to the sin(2)ψ x-ray analysis method. For the in situ experiments a process chamber was designed and manufactured, which is described in detail. First measurements were carried out at the HZG undulator imaging beamline (IBL, beamline P05) at the synchrotron storage ring PETRA III, DESY, Hamburg (Germany). The laser processing was carried out using a 6 kW high power diode laser system. Two different laser optics were compared, a Gaussian optic with a focus spot of ø 3 mm and a homogenizing optic with a rectangular spot dimension of 8 × 8 mm(2). The laser processing was carried out using spot hardening at a heating-/cooling rate of 1000 K/s and was controlled via pyrometric temperature measurement using a control temperature of 1150 °C. The set-up being established during the measuring campaign allowed for this first realization data collection rates of 10Hz. The data evaluation procedure applied enables the separation of thermal from elastic strains and gains unprecedented insight into the laser hardening process. PMID:23206092

  14. Accurate Anisotropic Fast Marching for Diffusion-Based Geodesic Tractography

    PubMed Central

    Jbabdi, S.; Bellec, P.; Toro, R.; Daunizeau, J.; Pélégrini-Issac, M.; Benali, H.

    2008-01-01

    Using geodesics for inferring white matter fibre tracts from diffusion-weighted MR data is an attractive method for at least two reasons: (i) the method optimises a global criterion, and hence is less sensitive to local perturbations such as noise or partial volume effects, and (ii) the method is fast, allowing to infer on a large number of connexions in a reasonable computational time. Here, we propose an improved fast marching algorithm to infer on geodesic paths. Specifically, this procedure is designed to achieve accurate front propagation in an anisotropic elliptic medium, such as DTI data. We evaluate the numerical performance of this approach on simulated datasets, as well as its robustness to local perturbation induced by fiber crossing. On real data, we demonstrate the feasibility of extracting geodesics to connect an extended set of brain regions. PMID:18299703

  15. Design and development of a profilometer for the fast and accurate characterization of optical surfaces

    NASA Astrophysics Data System (ADS)

    Gómez-Pedrero, José A.; Rodríguez-Ibañez, Diego; Alonso, José; Quirgoa, Juan A.

    2015-09-01

    With the advent of techniques devised for the mass production of optical components made with surfaces of arbitrary form (also known as free form surfaces) in the last years, a parallel development of measuring systems adapted for these new kind of surfaces constitutes a real necessity for the industry. Profilometry is one of the preferred methods for the assessment of the quality of a surface, and is widely employed in the optical fabrication industry for the quality control of its products. In this work, we present the design, development and assembly of a new profilometer with five axis of movement, specifically suited to the measurement of medium size (up to 150 mm of diameter) "free-form" optical surfaces with sub-micrometer accuracy and low measuring times. The apparatus is formed by three X, Y, Z linear motorized positioners plus and additional angular and a tilt positioner employed to locate accurately the surface to be measured and the probe which can be a mechanical or an optical one, being optical one a confocal sensor based on chromatic aberration. Both optical and mechanical probes guarantee an accuracy lower than the micrometer in the determination of the surface height, thus ensuring an accuracy in the surface curvatures of the order of 0.01 D or better. An original calibration procedure based on the measurement of a precision sphere has been developed in order to correct the perpendicularity error between the axes of the linear positioners. To reduce the measuring time of the profilometer, a custom electronics, based on an Arduino™ controller, have been designed and produced in order to synchronize the five motorized positioners and the optical and mechanical probes so that a medium size surface (around 10 cm of diameter) with a dynamic range in curvatures of around 10 D, can be measured in less than 300 seconds (using three axes) keeping the resolution in height and curvature in the figures mentioned above.

  16. A fast direct matrix solver for surface integral equation methods for electromagnetic wave scattering from non-penetrable targets

    NASA Astrophysics Data System (ADS)

    Wei, Jian-Gong; Peng, Zhen; Lee, Jin-Fa

    2012-10-01

    The implementation details of a fast direct solver is described herein for solving dense matrix equations from the application of surface integral equation methods for electromagnetic field scatterings from non-penetrable targets. The proposed algorithm exploits the smoothness of the far field and computes a low rank decomposition of the off-diagonal coupling blocks of the matrices through a set of skeletonization processes. Moreover, an artificial surface (the Huygens' surface) is introduced for each clustering group to efficiently account for the couplings between well-separated groups. Furthermore, a recursive multilevel version of the algorithm is presented. Although asymptotically the algorithm would not alter the bleak outlook of the complexity of the worst case scenario,O(N3) for required CPU time where N denotes the number of unknowns, for electrically large electromagnetic (EM) problems; through numerical examples, we found that the proposed multilevel direct solver can scale as good as O(N1.3) in memory consumption and O(N1.8) in CPU time for moderate-sized EM problems. Note that our conclusions are drawn based on a few sample examples that we have conducted and should not be taken as a true complexity analysis for general electrodynamic applications. However, for the fixed frequency (h-refinement) scenario, where the discretization size decreases, the computational complexities observed agree well with the theoretical predictions. Namely, the algorithm exhibits O(N) and O(N1.5) complexities for memory consumption and CPU time, respectively.

  17. Surface activation-based nanobonding and interconnection at room temperature

    NASA Astrophysics Data System (ADS)

    Howlader, M. M. R.; Yamauchi, A.; Suga, T.

    2011-02-01

    Flip chip nanobonding and interconnect system (NBIS) equipment with high precision alignment has been developed based on the surface activated bonding method for high-density interconnection and MEMS packaging. The 3σ alignment accuracy in the IR transmission system was approximately ±0.2 µm. The performance of the NBIS has been preliminarily investigated through bonding between relatively rough surfaces of copper through silicon vias (Cu-TSVs) and gold-stud bumps (Au-SBs), and smooth surfaces of silicon wafers. The Cu-TSVs of 55 µm diameter and the Au-SBs of 35 µm diameter with ~6-10 nm surface roughness (RMS) were bonded at room temperature after surface activation using an argon fast atom beam (Ar-FAB) under 0.16 N per bump. Silicon wafers of 50 mm diameter with ~0.2 nm RMS surface roughness were bonded without heating after surface activation. Void-free interfaces both in Cu-TSV/Au-SB and silicon/silicon with bonding strength equivalent to bulk fracture of Au and silicon, respectively, were achieved. A few nm thick amorphous layers were observed across the silicon/silicon interface that was fabricated by the Ar-FAB. This study in the interconnection and bonding facilitates the required three-dimensional integration on the same surface for high-density electronic and biomedical systems.

  18. Source estimation with surface-related multiples—fast ambiguity-resolved seismic imaging

    NASA Astrophysics Data System (ADS)

    Tu, Ning; Aravkin, Aleksandr; van Leeuwen, Tristan; Lin, Tim; Herrmann, Felix J.

    2016-03-01

    We address the problem of obtaining a reliable seismic image without prior knowledge of the source wavelet, especially from data that contain strong surface-related multiples. Conventional reverse-time migration requires prior knowledge of the source wavelet, which is either technically or computationally challenging to accurately determine; inaccurate estimates of the source wavelet can result in seriously degraded reverse-time migrated images, and therefore wrong geological interpretations. To solve this problem, we present a "wavelet-free" imaging procedure that simultaneously inverts for the source wavelet and the seismic image, by tightly integrating source estimation into a fast least-squares imaging framework, namely compressive imaging, given a reasonably accurate background velocity model. However, this joint inversion problem is difficult to solve as it is plagued with local minima and the ambiguity with respect to amplitude scalings, because of the multiplicative, and therefore nonlinear, appearance of the source wavelet in the otherwise linear formalism. We have found a way to solve this nonlinear joint-inversion problem using a technique called variable projection, and a way to overcome the scaling ambiguity by including surface-related multiples in our imaging procedure following recent developments in surface-related multiple prediction by sparse inversion. As a result, we obtain without prior knowledge of the source wavelet high-resolution seismic images, comparable in quality to images obtained assuming the true source wavelet is known. By leveraging the computationally efficient compressive-imaging methodology, these results are obtained at affordable computational costs compared with conventional processing work flows that include surface-related multiple removal and reverse-time migration.

  19. Source estimation with surface-related multiples—fast ambiguity-resolved seismic imaging

    NASA Astrophysics Data System (ADS)

    Tu, Ning; Aravkin, Aleksandr; van Leeuwen, Tristan; Lin, Tim; Herrmann, Felix J.

    2016-06-01

    We address the problem of obtaining a reliable seismic image without prior knowledge of the source wavelet, especially from data that contain strong surface-related multiples. Conventional reverse-time migration requires prior knowledge of the source wavelet, which is either technically or computationally challenging to accurately determine; inaccurate estimates of the source wavelet can result in seriously degraded reverse-time migrated images, and therefore wrong geological interpretations. To solve this problem, we present a `wavelet-free' imaging procedure that simultaneously inverts for the source wavelet and the seismic image, by tightly integrating source estimation into a fast least-squares imaging framework, namely compressive imaging, given a reasonably accurate background velocity model. However, this joint inversion problem is difficult to solve as it is plagued with local minima and the ambiguity with respect to amplitude scalings because of the multiplicative, and therefore nonlinear, appearance of the source wavelet in the otherwise linear formalism. We have found a way to solve this nonlinear joint-inversion problem using a technique called variable projection, and a way to overcome the scaling ambiguity by including surface-related multiples in our imaging procedure following recent developments in surface-related multiple prediction by sparse inversion. As a result, we obtain without prior knowledge of the source wavelet high-resolution seismic images, comparable in quality to images obtained assuming the true source wavelet is known. By leveraging the computationally efficient compressive-imaging methodology, these results are obtained at affordable computational costs compared with conventional processing work flows that include surface-related multiple removal and reverse-time migration.

  20. Fast Dynamic Meshing Method Based on Delaunay Graph and Inverse Distance Weighting Interpolation

    NASA Astrophysics Data System (ADS)

    Wang, Yibin; Qin, Ning; Zhao, Ning

    2016-06-01

    A novel mesh deformation technique is developed based on the Delaunay graph mapping method and the inverse distance weighting (IDW) interpolation. The algorithm maintains the advantages of the efficiency of Delaunay-graph-mapping mesh deformation while possess the ability for better controlling the near surface mesh quality. The Delaunay graph is used to divide the mesh domain into a number of sub-domains. On each of the sub-domains, the inverse distance weighting interpolation is applied to build a much smaller sized translation matrix between the original mesh and the deformed mesh, resulting a similar efficiency for the mesh deformation as compared to the fast Delaunay graph mapping method. The paper will show how the near-wall mesh quality is controlled and improved by the new method while the computational time is compared with the original Delaunay graph mapping method.

  1. Ultra-Fast Glyco-Coating of Non-Biological Surfaces.

    PubMed

    Williams, Eleanor; Barr, Katie; Korchagina, Elena; Tuzikov, Alexander; Henry, Stephen; Bovin, Nicolai

    2016-01-01

    The ability to glycosylate surfaces has medical and diagnostic applications, but there is no technology currently recognized as being able to coat any surface without the need for prior chemical modification of the surface. Recently, a family of constructs called function-spacer-lipids (FSL) has been used to glycosylate cells. Because it is known that lipid-based material can adsorb onto surfaces, we explored the potential and performance of cell-labelling FSL constructs to "glycosylate" non-biological surfaces. Using blood group A antigen as an indicator, the performance of a several variations of FSL constructs to modify a large variety of non-biological surfaces was evaluated. It was found the FSL constructs when optimised could in a few seconds glycosylate almost any non-biological surface including metals, glass, plastics, rubbers and other polymers. Although the FSL glycan coating was non-covalent, and therefore temporary, it was sufficiently robust with appropriate selection of spacer and surface that it could capture anti-glycan antibodies, immobilize cells (via antibody), and withstand incubation in serum and extensive buffer washing, making it suitable for diagnostic and research applications. PMID:26784187

  2. Ultra-Fast Glyco-Coating of Non-Biological Surfaces

    PubMed Central

    Williams, Eleanor; Barr, Katie; Korchagina, Elena; Tuzikov, Alexander; Henry, Stephen; Bovin, Nicolai

    2016-01-01

    The ability to glycosylate surfaces has medical and diagnostic applications, but there is no technology currently recognized as being able to coat any surface without the need for prior chemical modification of the surface. Recently, a family of constructs called function-spacer-lipids (FSL) has been used to glycosylate cells. Because it is known that lipid-based material can adsorb onto surfaces, we explored the potential and performance of cell-labelling FSL constructs to “glycosylate” non-biological surfaces. Using blood group A antigen as an indicator, the performance of a several variations of FSL constructs to modify a large variety of non-biological surfaces was evaluated. It was found the FSL constructs when optimised could in a few seconds glycosylate almost any non-biological surface including metals, glass, plastics, rubbers and other polymers. Although the FSL glycan coating was non-covalent, and therefore temporary, it was sufficiently robust with appropriate selection of spacer and surface that it could capture anti-glycan antibodies, immobilize cells (via antibody), and withstand incubation in serum and extensive buffer washing, making it suitable for diagnostic and research applications. PMID:26784187

  3. Fast spot-based multiscale simulations of granular drainage

    SciTech Connect

    Rycroft, Chris H.; Wong, Yee Lok; Bazant, Martin Z.

    2009-05-22

    We develop a multiscale simulation method for dense granular drainage, based on the recently proposed spot model, where the particle packing flows by local collective displacements in response to diffusing"spots'" of interstitial free volume. By comparing with discrete-element method (DEM) simulations of 55,000 spheres in a rectangular silo, we show that the spot simulation is able to approximately capture many features of drainage, such as packing statistics, particle mixing, and flow profiles. The spot simulation runs two to three orders of magnitude faster than DEM, making it an appropriate method for real-time control or optimization. We demonstrateextensions for modeling particle heaping and avalanching at the free surface, and for simulating the boundary layers of slower flow near walls. We show that the spot simulations are robust and flexible, by demonstrating that they can be used in both event-driven and fixed timestep approaches, and showing that the elastic relaxation step used in the model can be applied much less frequently and still create good results.

  4. Evaluation of the surface affinity of water in three biochars using fast field cycling NMR relaxometry.

    PubMed

    Bubici, Salvatore; Korb, Jean-Pierre; Kučerik, Jiří; Conte, Pellegrino

    2016-05-01

    Many soil functions depend on the interaction of water with soil. The affinity of water for soils can be altered by applying soil amendments like stone meal, manure, or biochar (a carbonaceous material obtained by pyrolysis of biomasses). In fact, the addition of hydrophobic biochar to soil may increase soil repellency, reduce water-adsorbing capacity, inhibit microbial activity, alter soil filter, buffer, storage, and transformation functions. For this reason, it is of paramount importance to monitor water affinity for biochar surface (also referred to as 'wettability') in order to better address its applications in soil systems. In this study, we propose the use of fast field cycling NMR relaxometry technique with the application of a new mathematical model for data interpretation, as a valid alternative to the traditional contact angle (CA) measurements for biochar wettability evaluation. Either NMR or CA results revealed the same wettability trend for the biochars studied here. The advantage of NMR relaxometry over CA measurements lies in the possibility to obtain at the microscopic level a variety of different information in only one shot. In fact, while CA provides only wettability evaluation, NMR relaxometry also allows achievement of the mechanisms for water molecular dynamics on biochar surface, thereby leading to the possibility to understand better, in future research, the role of biochar in increasing soil quality and plant nutrition. Copyright © 2016 John Wiley & Sons, Ltd. PMID:27062147

  5. Surface water mass composition changes captured by cores of Arctic land-fast sea ice

    NASA Astrophysics Data System (ADS)

    Smith, I. J.; Eicken, H.; Mahoney, A. R.; Van Hale, R.; Gough, A. J.; Fukamachi, Y.; Jones, J.

    2016-04-01

    In the Arctic, land-fast sea ice growth can be influenced by fresher water from rivers and residual summer melt. This paper examines a method to reconstruct changes in water masses using oxygen isotope measurements of sea ice cores. To determine changes in sea water isotope composition over the course of the ice growth period, the output of a sea ice thermodynamic model (driven with reanalysis data, observations of snow depth, and freeze-up dates) is used along with sea ice oxygen isotope measurements and an isotopic fractionation model. Direct measurements of sea ice growth rates are used to validate the output of the sea ice growth model. It is shown that for sea ice formed during the 2011/2012 ice growth season at Barrow, Alaska, large changes in isotopic composition of the ocean waters were captured by the sea ice isotopic composition. Salinity anomalies in the ocean were also tracked by moored instruments. These data indicate episodic advection of meteoric water, having both lower salinity and lower oxygen isotopic composition, during the winter sea ice growth season. Such advection of meteoric water during winter is surprising, as no surface meltwater and no local river discharge should be occurring at this time of year in that area. How accurately changes in water masses as indicated by oxygen isotope composition can be reconstructed using oxygen isotope analysis of sea ice cores is addressed, along with methods/strategies that could be used to further optimize the results. The method described will be useful for winter detection of meteoric water presence in Arctic fast ice regions, which is important for climate studies in a rapidly changing Arctic. Land-fast sea ice effective fractionation coefficients were derived, with a range of +1.82‰ to +2.52‰. Those derived effective fractionation coefficients will be useful for future water mass component proportion calculations. In particular, the equations given can be used to inform choices made when

  6. Uncertainty Assessment for Fast Reactors Based on Nuclear Data Adjustment

    NASA Astrophysics Data System (ADS)

    Ivanova, T.; Ivanov, E.; Ecrabet, F.

    2014-04-01

    The paper presents IRSN's results of the OECD/NEA WPEC Subgroup 33 benchmark exercise which is focused upon combined use of differential and integral data using adjustment technique. The results are generated by BERING code using different sets of input data: integral parameters and sensitivity coefficients for fast benchmark experiments and applications computed by deterministic ERANOS code and Monte Carlo SCALE sequences, COMMARA-2.0 and JENDL-4.0 cross-section-covariance data and integral correlations provided by JAEA. The paper demonstrates results of the adjustment when using different input data and two adjustment algorithms implemented in BERING.

  7. A portable intra-oral scanner based on sinusoidal pattern of fast phase-shifting

    NASA Astrophysics Data System (ADS)

    Jan, Chia-Ming; Lin, Ying-Chieh

    2016-03-01

    This paper presented our current research about the intra-oral scanner made by MIRDC. Utilizing the sinusoidal pattern for fast phase-shifting technique to deal with 3D digitalization of human dental surface profile, the development of pseudo-phase shifting digital projection can easily achieve one type of full-field scanning instead of the common technique of the laser line scanning. Based on traditional Moiré method, we adopt projecting fringes and retrieve phase reconstruction to forward phase unwrapping. The phase difference between the plane and object can be exactly calculated from the desired fringe images, and the surface profile of object was probably reconstructed by using the phase differences information directly. According to our algorithm of space mapping between projections and capturing orientation exchange of our intra-oral scanning configuration, the system we made certainly can be proved to achieve the required accuracy of +/-10μm to deal with intra-oral scanning on the basis of utilizing active triangulation method. The final purpose aimed to the scanning of object surface profile with its size about 10x10x10mm3.

  8. Devices based on surface plasmon interference filters

    NASA Technical Reports Server (NTRS)

    Wang, Yu (Inventor)

    2001-01-01

    Devices based on surface plasmon filters having at least one metal-dielectric interface to support surface plasmon waves. A multi-layer-coupled surface plasmon notch filter is provided to have more than two symmetric metal-dielectric interfaces coupled with one another to produce a transmission spectral window with desired spectral profile and bandwidth. Such notch filters can form various color filtering devices for color flat panel displays.

  9. Cargo inspection system based on pulsed fast neutron analysis

    NASA Astrophysics Data System (ADS)

    Brown, Douglas R.; Coates, Allison; Kuo, Stelly N.; Loveman, Robert; Pentaleri, Ed; Rynes, Joel C.

    1997-02-01

    The pulsed fast neutron analysis (PFNA) cargo inspection system (CIS) uses a nanosecond pulsed beam of fast neutrons to interrogate the contents of small volume elements -- voxels -- of a cargo container or truck. A color display shows the three-dimensional location of suspected contraband, such as drugs or explosives. The neutrons interact with the elemental contents of each vowel, and gamma rays characteristic of the elements are collected in an array of detectors. The elemental signals and their ratios give unique signatures for drugs and other contraband. From the time of arrival of the gamma rays, the position of the vowel within the truck is determined. The PFNA CIS is designed to scan five or more trucks per hour. The operator interface has been designed to assist in the rapid identification of drugs, explosives or other contraband. This paper describes the system and the tests for drugs and explosives that have been carried out during the past year. These tests were aimed at exploring the envelope of performance of the system.

  10. Cargo inspection system based on pulsed fast neutron analysis

    NASA Astrophysics Data System (ADS)

    Brown, D. R.; Gozani, T.

    1995-05-01

    Pulsed Fast Neutron Analysis (PFNA) is a technique which uses a collimated pulsed beam of fast neutrons to excite the nuclei of common elements in bulk materials. Direct imaging of the elemental contents of the material is accomplished by using time-of-flight analysis to identify the position of the interactions and gamma-ray spectroscopy to identify the elemental gamma-rays. From the ratios and absolute measurements of elemental abundances the identification of the material can be deduced. The PFNA cargo inspection system uses a volume type negative ion source and a double drift bunching system to create an intense beam of nano-second bunched negative deuterium ions which, after acceleration to around 6 MeV, impinge on a deuterium gas target producing pulsed neutrons. A unique high speed data acquisition system digitizes and analyzes the time-energy data in real time. Experimental studies and computer simulations were extensively employed to characterize and optimize the design parameters of the system.

  11. Research of Fast 3D Imaging Based on Multiple Mode

    NASA Astrophysics Data System (ADS)

    Chen, Shibing; Yan, Huimin; Ni, Xuxiang; Zhang, Xiuda; Wang, Yu

    2016-02-01

    Three-dimensional (3D) imaging has received increasingly extensive attention and has been widely used currently. Lots of efforts have been put on three-dimensional imaging method and system study, in order to meet fast and high accurate requirement. In this article, we realize a fast and high quality stereo matching algorithm on field programmable gate array (FPGA) using the combination of time-of-flight (TOF) camera and binocular camera. Images captured from the two cameras own a same spatial resolution, letting us use the depth maps taken by the TOF camera to figure initial disparity. Under the constraint of the depth map as the stereo pairs when comes to stereo matching, expected disparity of each pixel is limited within a narrow search range. In the meanwhile, using field programmable gate array (FPGA, altera cyclone IV series) concurrent computing we can configure multi core image matching system, thus doing stereo matching on embedded system. The simulation results demonstrate that it can speed up the process of stereo matching and increase matching reliability and stability, realize embedded calculation, expand application range.

  12. Nanoparticle Based Surface-Enhanced Raman Spectroscopy

    SciTech Connect

    Talley, C E; Huser, T R; Hollars, C W; Jusinski, L; Laurence, T; Lane, S M

    2005-01-03

    Surface-enhanced Raman scattering is a powerful tool for the investigation of biological samples. Following a brief introduction to Raman and surface-enhanced Raman scattering, several examples of biophotonic applications of SERS are discussed. The concept of nanoparticle based sensors using SERS is introduced and the development of these sensors is discussed.

  13. Recodable surfaces based on switchable hydrogen bonds.

    PubMed

    Wedler-Jasinski, Nils; Delbosc, Nicolas; Virolleaud, Marie-Alice; Montarnal, Damien; Welle, Alexander; Barner, Leonie; Walther, Andreas; Bernard, Julien; Barner-Kowollik, Christopher

    2016-07-01

    We introduce recodable surfaces solely based on reversible artificial hydrogen bonding interactions. We show that a symmetrical oligoamide (SOA) attached to poly(methyl methacrylate) (PMMA) can be repeatedly immobilized and cleaved off spatially defined surface domains photochemically functionalized with asymmetric oligoamides (AOAs). The spatially resolved recodability is imaged and quantified via ToF-SIMS. PMID:27339101

  14. Fast ultrahigh-degree global spherical harmonic synthesis on nonequispaced grid points at irregular surfaces

    NASA Astrophysics Data System (ADS)

    Moazezi, Siamak; Zomorrodian, Hossein; Siahkoohi, Hamid Reza; Azmoudeh-Ardalan, Alireza; Gholami, Ali

    2016-05-01

    In this paper, we presented a fast unified method to compute the gravity field functionals and their directional derivatives up to arbitrary orders on nonequispaced grid points at irregular surfaces using ultrahigh-degree models. The direct spherical harmonic synthesis (SHS) for computing the gravity field functionals at arbitrary locations through the Legendre functions is a time-consuming task for high-order and -degree models. Besides, to compute the derivatives of SHS in terms of latitude, the derivatives of the Legendre functions are needed. Therefore, we used Fourier coefficients of Wigner d-functions to compute the directional derivatives of SHS up to arbitrary orders. We also showed that these functions and their derivatives up to order 2 are stable up to ultrahigh-degree 2^{14} = 16{,}384 using extended double precision (i.e., 80 bits variables). Although 2D-FFT can accelerate the computation of global SHS (GSHS), it restricts the results on equispaced grid points. Hence, we used the nonequispaced FFT (NFFT) for computing GSHS on irregular grid points on the sphere that it is the fast nonequispaced GSHS (NGSHS). For maximum degree N and computing points of O(N^2) with arbitrary locations, the direct computation methods have the complexity of O(N^4) . But the presented algorithm with and without precomputed Fourier coefficients of Wigner d-functions has the complexity of O(N^2 log ^2 N + N^2 s^2) and O(N^3 + N^2 s^2) , respectively, where s is cutoff parameter of convolution in NFFT. Using a convolution technique in frequency domain, the NGSHS on the ellipsoid was computed. For computation the gravity field functionals by the NGSHS at irregular surfaces, we defined the Taylor expansion and the Padé approximation both on the sphere and on the ellipsoid. The results showed that the constructed Padé approximation on the ellipsoid provides better accuracy. Finally, we showed that the introduced unified algorithm achieves the required accuracy and that it is

  15. Rough surface effects on active and passive microwave remote sensing of soil moisture at L-band using 3D fast solution of Maxwell's equations

    NASA Astrophysics Data System (ADS)

    Wang, Haogang; Liao, Tien-Hao; Shi, Jiancheng; Yu, Zherui

    2014-11-01

    The forthcoming Water Cycle Observation Mission (WCOM) is to understand the water cycle system among land, atmosphere, and ocean. In both active and passive microwave remote sensing of soil moisture, the surface roughness plays an important role. Electromagnetic models of roughness provide tables of emissivities and backscattering coefficients that can be used to retrieve soil moisture. In this paper, a fast and accurate three dimensional solution of Maxwell's equations is developed and employed to solve rough soil surface scattering problem at L-band. The algorithm combines QR Pre-Ranked Multilevel UV(MLUV) factorization and Hierarchical Fast Far Field Approximation. It is implemented using OpenMP interface for fast parallel calculation. In this algorithm, 1) QR based rank predetermined algorithm is derived to further compress the UV matrix pairs obtained using coarse-coarse sampling; 2) at the finer levels, MLUV is used straightforwardly to factorize the interactions between groups, while at the coarsest level, interactions between groups in the interaction list are calculated using an elegantly derived Hierarchical Fast Far Field Approximation (HFAFFA) to accelerate the calculation of interactions between large groups while keeping the accuracy of this approximation; 3) OpenMP interface is used to parallelize this new algorithm. Numerical results including the incoherent bistatic scattering coefficients and the emissivity demonstrate the efficiency of this method.

  16. Fast calculation of object infrared spectral scattering based on CUDA

    NASA Astrophysics Data System (ADS)

    Li, Liang-chao; Niu, Wu-bin; Wu, Zhen-sen

    2010-11-01

    Computational unified device architecture (CUDA) is used for paralleling the spectral scattering calculation from non-Lambertian object of sky and earth background irradiation. The bidirectional reflectance distribution function (BRDF) of five parameter model is utilized in object surface element scattering calculation. The calculation process is partitioned into many threads running in GPU kernel and each thread computes a visible surface element infrared spectral scattering intensity in a specific incident direction, all visible surface elements' intensity are weighted and averaged to obtain the object surface scattering intensity. The comparison of results of the CPU calculation and CUDA parallel calculation of a cylinder shows that the CUDA parallel calculation speed improves more than two hundred times in meeting the accuracy, with a high engineering value.

  17. A fast Stokes inversion technique based on quadratic regression

    NASA Astrophysics Data System (ADS)

    Teng, Fei; Deng, Yuan-Yong

    2016-05-01

    Stokes inversion calculation is a key process in resolving polarization information on radiation from the Sun and obtaining the associated vector magnetic fields. Even in the cases of simple local thermodynamic equilibrium (LTE) and where the Milne-Eddington approximation is valid, the inversion problem may not be easy to solve. The initial values for the iterations are important in handling the case with multiple minima. In this paper, we develop a fast inversion technique without iterations. The time taken for computation is only 1/100 the time that the iterative algorithm takes. In addition, it can provide available initial values even in cases with lower spectral resolutions. This strategy is useful for a filter-type Stokes spectrograph, such as SDO/HMI and the developed two-dimensional real-time spectrograph (2DS).

  18. Slow-fast effect and generation mechanism of brusselator based on coordinate transformation

    NASA Astrophysics Data System (ADS)

    Li, Xianghong; Hou, Jingyu; Shen, Yongjun

    2016-08-01

    The Brusselator with different time scales, which behaves in the classical slow-fast effect, is investigated, and is characterized by the coupling of the quiescent and spiking states. In order to reveal the generation mechanism by using the slow-fast analysis method, the coordinate transformation is introduced into the classical Brusselator, so that the transformed system can be divided into the fast and slow subsystems. Furthermore, the stability condition and bifurcation phenomenon of the fast subsystem are analyzed, and the attraction domains of different equilibria are presented by theoretical analysis and numerical simulation respectively. Based on the transformed system, it could be found that the generation mechanism between the quiescent and spiking states is Fold bifurcation and change of the attraction domain of the fast subsystem. The results may also be helpful to the similar system with multiple time scales.

  19. Fast simulated annealing inversion of surface waves on pavement using phase-velocity spectra

    USGS Publications Warehouse

    Ryden, N.; Park, C.B.

    2006-01-01

    The conventional inversion of surface waves depends on modal identification of measured dispersion curves, which can be ambiguous. It is possible to avoid mode-number identification and extraction by inverting the complete phase-velocity spectrum obtained from a multichannel record. We use the fast simulated annealing (FSA) global search algorithm to minimize the difference between the measured phase-velocity spectrum and that calculated from a theoretical layer model, including the field setup geometry. Results show that this algorithm can help one avoid getting trapped in local minima while searching for the best-matching layer model. The entire procedure is demonstrated on synthetic and field data for asphalt pavement. The viscoelastic properties of the top asphalt layer are taken into account, and the inverted asphalt stiffness as a function of frequency compares well with laboratory tests on core samples. The thickness and shear-wave velocity of the deeper embedded layers are resolved within 10% deviation from those values measured separately during pavement construction. The proposed method may be equally applicable to normal soil site investigation and in the field of ultrasonic testing of materials. ?? 2006 Society of Exploration Geophysicists.

  20. Fast grating-based X-ray phase-contrast tomosynthesis.

    PubMed

    Xi, Yan; Zhao, Jun

    2013-01-01

    As an imaging technique with low radiation dose and improved contrast, digital x-ray tomosynthesis is widely used in clinical diagnoses. Based on the superior capability of x-ray phase-contrast imaging (PCI) techniques for imaging low density materials, the combination of X-ray tomosynthesis and PCI can potentially provide higher efficiency in the detection of soft tissues. The goal of this work was to develop a fast imaging method for phase-contrast tomosynthesis, called fast grating-based phase-contrast tomosynthesis (GPC-Tomo), which integrates tomosynthesis with a grating-based PCI technique. Following the interlaced phase-stepping (PS) data collection method, which is much faster than conventional PS method, we propose a novel image reconstruction method called inner-focusing (IF) reconstruction for the fast GPC-Tomo. The proposed IF reconstruction method was validated by real experiments and the results suggested its effectiveness in achieving a fast GPC-Tomo. PMID:24110189

  1. Protein Based Localized Surface Plasmon Resonance Gas Sensing

    NASA Astrophysics Data System (ADS)

    Meisam, Omidi; Gh., Amoabediny; Yazdian, F.; Habibi-Rezaei, M.

    2015-01-01

    We apply the localized surface plasmon resonance (LSPR) of gold nanoparticles (GNPs) covalently coupled with cytochrome c (cyt c) to create a nanobiosensor for detecting hydrogen sulfide (H2S) in the range of 15-100 ppb. Monolayer formation of GNPs on glass surface functionalized with 3-aminopropyltrimethoxysilane (APTMS) is performed for fabricating a chip-based format of the optical transducer. By chemical introduction of short-chain thiol derivatives on cyt c protein shell via its lysine residues, a very fast self-assembled monolayer (SAM) of cyt c is formed on the GNPs. Significant shifts in the LSPR peak (ΔλLSPR) are observed by reacting H2S with cyt c. Results show a linear relationship between ΔλLSPR and H2S concentration. Furthermore, shifts in the LSPR peak are reversible and the peak positions return to their pre-exposure values once the H2S is removed. The experimental results strongly indicate that the protein based LSPR chip can be successfully used as a simple, fast, sensitive and quantitative sensor for H2S detection.

  2. Nonlaser-based 3D surface imaging

    SciTech Connect

    Lu, Shin-yee; Johnson, R.K.; Sherwood, R.J.

    1994-11-15

    3D surface imaging refers to methods that generate a 3D surface representation of objects of a scene under viewing. Laser-based 3D surface imaging systems are commonly used in manufacturing, robotics and biomedical research. Although laser-based systems provide satisfactory solutions for most applications, there are situations where non laser-based approaches are preferred. The issues that make alternative methods sometimes more attractive are: (1) real-time data capturing, (2) eye-safety, (3) portability, and (4) work distance. The focus of this presentation is on generating a 3D surface from multiple 2D projected images using CCD cameras, without a laser light source. Two methods are presented: stereo vision and depth-from-focus. Their applications are described.

  3. Pole Photogrammetry with AN Action Camera for Fast and Accurate Surface Mapping

    NASA Astrophysics Data System (ADS)

    Gonçalves, J. A.; Moutinho, O. F.; Rodrigues, A. C.

    2016-06-01

    High resolution and high accuracy terrain mapping can provide height change detection for studies of erosion, subsidence or land slip. A UAV flying at a low altitude above the ground, with a compact camera, acquires images with resolution appropriate for these change detections. However, there may be situations where different approaches may be needed, either because higher resolution is required or the operation of a drone is not possible. Pole photogrammetry, where a camera is mounted on a pole, pointing to the ground, is an alternative. This paper describes a very simple system of this kind, created for topographic change detection, based on an action camera. These cameras have high quality and very flexible image capture. Although radial distortion is normally high, it can be treated in an auto-calibration process. The system is composed by a light aluminium pole, 4 meters long, with a 12 megapixel GoPro camera. Average ground sampling distance at the image centre is 2.3 mm. The user moves along a path, taking successive photos, with a time lapse of 0.5 or 1 second, and adjusting the speed in order to have an appropriate overlap, with enough redundancy for 3D coordinate extraction. Marked ground control points are surveyed with GNSS for precise georeferencing of the DSM and orthoimage that are created by structure from motion processing software. An average vertical accuracy of 1 cm could be achieved, which is enough for many applications, for example for soil erosion. The GNSS survey in RTK mode with permanent stations is now very fast (5 seconds per point), which results, together with the image collection, in a very fast field work. If an improved accuracy is needed, since image resolution is 1/4 cm, it can be achieved using a total station for the control point survey, although the field work time increases.

  4. A FAST ITERATIVE METHOD FOR SOLVING THE EIKONAL EQUATION ON TRIANGULATED SURFACES.

    PubMed

    Fu, Zhisong; Jeong, Won-Ki; Pan, Yongsheng; Kirby, Robert M; Whitaker, Ross T

    2011-01-01

    This paper presents an efficient, fine-grained parallel algorithm for solving the Eikonal equation on triangular meshes. The Eikonal equation, and the broader class of Hamilton-Jacobi equations to which it belongs, have a wide range of applications from geometric optics and seismology to biological modeling and analysis of geometry and images. The ability to solve such equations accurately and efficiently provides new capabilities for exploring and visualizing parameter spaces and for solving inverse problems that rely on such equations in the forward model. Efficient solvers on state-of-the-art, parallel architectures require new algorithms that are not, in many cases, optimal, but are better suited to synchronous updates of the solution. In previous work [W. K. Jeong and R. T. Whitaker, SIAM J. Sci. Comput., 30 (2008), pp. 2512-2534], the authors proposed the fast iterative method (FIM) to efficiently solve the Eikonal equation on regular grids. In this paper we extend the fast iterative method to solve Eikonal equations efficiently on triangulated domains on the CPU and on parallel architectures, including graphics processors. We propose a new local update scheme that provides solutions of first-order accuracy for both architectures. We also propose a novel triangle-based update scheme and its corresponding data structure for efficient irregular data mapping to parallel single-instruction multiple-data (SIMD) processors. We provide detailed descriptions of the implementations on a single CPU, a multicore CPU with shared memory, and SIMD architectures with comparative results against state-of-the-art Eikonal solvers. PMID:22641200

  5. (abstract) A Low-Cost Mission to 2060 Chiron Based on the Pluto Fast Flyby

    NASA Technical Reports Server (NTRS)

    Stern, S. A.; Salvo, C. G.; Wallace, R. A.; Weinstein, S. S.; Weissman, P. R.

    1994-01-01

    The Pluto Fast Flyby-based mission to Chiron described in this paper is a low cost, scientifically rewarding, focused mission in the outer solar system. The proposed mission will make a flyby of 2060 Chiron, an active 'comet' with over 10(sup 4) times the mass of Halley, and an eccentric, Saturn-crossing orbit which ranges from 8.5 to 19 AU. This mission concept achieves the flyby 4.2 years after launch on a direct trajectory from Earth, is independent of Jupiter launch windows, and fits within Discovery cost guidelines. This mission offers the scientific opportunity to examine a class of object left unsampled by the trail-blazing Mariners, Pioneers, Voyagers, and missions to Halley. Spacecraft reconnaissance of Chiron addresses unique objectives relating to cometary science, other small bodies, the structure of quasi-bound atmospheres on modest-sized bodies, and the origin of primitive bodies and the giant planets. Owing to Chiron's large size (180surface morphology, surface composition, internal structure, surface activity (including the nature of Chiron's outbursts), and origin. Engineering analysis indicates that the spacecraft is capable of navigating to and encountering Chiron at close approach distances of less than 5 000 km, well inside the 50 000 to 150 000 km coma, and perhaps within the collisional chemistry zone of the coma. The low cost of the proposed Chiron mission is based on the opportunity to use the planned Pluto Flyby spare spacecraft and a Proton Expendable Launch Vehicle (ELV) (the pluto spacecraft is being designed to be compatible with a Proton launch). Backup

  6. Radial Transport Characteristics of Fast Ions Due to Energetic-Particle Modes inside the Last Closed-Flux Surface in the Compact Helical System

    SciTech Connect

    Nagaoka, Kenichi; Isobe, Mitsutaka; Toi, Kazuo; Shimizu, Akihiro; Fujisawa, Akihide; Ohshima, Shunsuke; Nakano, Haruhisa; Osakabe, Masaki; Todo, Yasushi; Akiyama, Tsuyoshi; Suzuki, Chihiro; Nishimura, Shin; Yoshimura, Yasuo; Matsuoka, Keisuke; Okamura, Shoichi; Nagashima, Yoshihiko

    2008-02-15

    The internal behavior of fast ions interacting with magnetohydrodynamic bursts excited by energetic ions has been experimentally investigated in the compact helical system. The resonant convective oscillation of fast ions was identified inside the last closed-flux surface during an energetic-particle mode (EPM) burst. The phase difference between the fast-ion oscillation and the EPM, indicating the coupling strength between them, remains a certain value during the EPM burst and drives an anomalous transport of fast ions.

  7. Fast gain and phase recovery of semiconductor optical amplifiers based on submonolayer quantum dots

    SciTech Connect

    Herzog, Bastian Owschimikow, Nina; Kaptan, Yücel; Kolarczik, Mirco; Switaiski, Thomas; Woggon, Ulrike; Schulze, Jan-Hindrik; Rosales, Ricardo; Strittmatter, André; Bimberg, Dieter; Pohl, Udo W.

    2015-11-16

    Submonolayer quantum dots as active medium in opto-electronic devices promise to combine the high density of states of quantum wells with the fast recovery dynamics of self-assembled quantum dots. We investigate the gain and phase recovery dynamics of a semiconductor optical amplifier based on InAs submonolayer quantum dots in the regime of linear operation by one- and two-color heterodyne pump-probe spectroscopy. We find an as fast recovery dynamics as for quantum dot-in-a-well structures, reaching 2 ps at moderate injection currents. The effective quantum well embedding the submonolayer quantum dots acts as a fast and efficient carrier reservoir.

  8. SACRD: a data base for fast reactor safety computer codes, operational procedures

    SciTech Connect

    Forsberg, V.M.; Arwood, J.W.; Greene, N.M.; Raiford, G.B.

    1980-09-01

    SACRD (Safety Analysis Computerized Reactor Data) is a data base of nondesign-related information used in computer codes for fast reactor safety analyses. This document reports the procedures used in SACRD to help assure a reasonable level of integrity of the material contained in the data base. It also serves to document much of the computer software used with the data base.

  9. Fast Numerically Based Modeling for Ground Penetrating Radar

    NASA Astrophysics Data System (ADS)

    Sassen, D. S.; Everett, M. E.

    2007-05-01

    There is a need for computationally fast GPR numerical modeling. This includes circumstances where real time performance is needed, for example discrimination of landmines or UXO's, and in circumstances that require a high number of successive forward problems, for example inversion or imaging. Traditional numerical techniques such as finite difference or finite element are too slow for these applications, but they provide results from general scenarios such as scattering from very complicated shapes with high contrast. Neural networks may fit in the niche between analytical techniques and traditional numerical techniques. Our concept is training a neural network to associate the model inputs of electromagnetic properties of the background and targets, and the size and shape of the targets, with the output generated by a 3-D finite difference model. Successive examples from various electromagnetic properties and targets are displayed to the neural network, until the neural network has adapted itself though optimization. The trained neural network is now used as the forward model by displaying new input parameters and the neural network then generates the appropriate output. The results from the neural network are then compared to results from finite difference models to see how well the neural networks is performing and at what point it breaks down. Areas of poor fit can be addressed through further training. The neural network GPR model can be adapted by displaying additional finite difference results to the neural network, and can also be adapted to a specific field area by actual field data examples. Because of this adaptation ability the neural network GPR model can be optimized for specific environments and applications.

  10. FMFilter: A fast model based variant filtering tool.

    PubMed

    Akgün, Mete; Faruk Gerdan, Ö; Görmez, Zeliha; Demirci, Hüseyin

    2016-04-01

    The availability of whole exome and genome sequencing has completely changed the structure of genetic disease studies. It is now possible to solve the disease causing mechanisms within shorter time and budgets. For this reason, mining out the valuable information from the huge amount of data produced by next generation techniques becomes a challenging task. Current tools analyze sequencing data in various methods. However, there is still need for fast, easy to use and efficacious tools. Considering genetic disease studies, there is a lack of publicly available tools which support compound heterozygous and de novo models. Also, existing tools either require advanced IT expertise or are inefficient for handling large variant files. In this work, we provide FMFilter, an efficient sieving tool for next generation sequencing data produced by genetic disease studies. We develop a software which allows to choose the inheritance model (recessive, dominant, compound heterozygous and de novo), the affected and control individuals. The program provides a user friendly Graphical User Interface which eliminates the requirement of advanced computer techniques. It has various filtering options which enable to eliminate the majority of the false alarms. FMFilter requires negligible memory, therefore it can easily handle very large variant files like multiple whole genomes with ordinary computers. We demonstrate the variant reduction capability and effectiveness of the proposed tool with public and in-house data for different inheritance models. We also compare FMFilter with the existing filtering software. We conclude that FMFilter provides an effective and easy to use environment for analyzing next generation sequencing data from Mendelian diseases. PMID:26925517

  11. Helical surface reconstruction based on CMM

    NASA Astrophysics Data System (ADS)

    Pan, Zhikang; Zhu, Lianqing; Chen, Qingshan; Guo, Yangkuan

    2010-12-01

    The reconstruction of helical surface plays an important role in many engineering and scientific applications. This paper tends to establish an effective processing scheme of surface reconstruction of scatter 3D points, and make an in-depth exploration for the preprocessing technology of scatter points set and the algorithm of three-dimension model surface reconstruction. This paper has three main aspects: data acquisition, data preprocess and surface reconstruction. First, by comparing several measuring equipments, the screw parts are scanned via CMM (Coordinate Measuring Machine). Initial 3D point clouds are obtained by setting the scanning route according to the shape of the targets. Second, Using "3σ" criteria point de-noising is applied to the initial data points. Then Heap Sort is used to sort these points, being convenient for saving data and reconstructing the surface. Third, this paper presents a surface reconstruction method based on triangulation algorithm. The triangular meshes are generated based on Delaunay triangulation technique in two dimensions. And Loop Subdivision is adopted in order to get manifold meshes. Finally the surface reconstruction of an involute worm and an Archimedes worm shows that this approach is feasible.

  12. Helical surface reconstruction based on CMM

    NASA Astrophysics Data System (ADS)

    Pan, Zhikang; Zhu, Lianqing; Chen, Qingshan; Guo, Yangkuan

    2011-05-01

    The reconstruction of helical surface plays an important role in many engineering and scientific applications. This paper tends to establish an effective processing scheme of surface reconstruction of scatter 3D points, and make an in-depth exploration for the preprocessing technology of scatter points set and the algorithm of three-dimension model surface reconstruction. This paper has three main aspects: data acquisition, data preprocess and surface reconstruction. First, by comparing several measuring equipments, the screw parts are scanned via CMM (Coordinate Measuring Machine). Initial 3D point clouds are obtained by setting the scanning route according to the shape of the targets. Second, Using "3σ" criteria point de-noising is applied to the initial data points. Then Heap Sort is used to sort these points, being convenient for saving data and reconstructing the surface. Third, this paper presents a surface reconstruction method based on triangulation algorithm. The triangular meshes are generated based on Delaunay triangulation technique in two dimensions. And Loop Subdivision is adopted in order to get manifold meshes. Finally the surface reconstruction of an involute worm and an Archimedes worm shows that this approach is feasible.

  13. SIMPLE SURFACE PLASMON RESONANCE-BASED DOSEMETER.

    PubMed

    Urbonavičius, Benas Gabrielis; Adlienė, Diana

    2016-06-01

    The interest to application of various surface plasmon resonance (SPR)-based sensors for the investigation of chemical and biological processes in thin layers deposited on the grating's surface/media is developing. Characterisation of processes as well as specimen's features might be performed analysing variations in optical properties (refraction index) of these thin layers. SPR sensors by default are characterised by high resolution and small uncertainties, and measurements might be performed in situ High-resolution, low-cost, SPR-based dosemeter concept has been proposed and realised depositing dose-sensitive nPAG gel layer onto diffraction grating's surface. The experimental set-up and method for information read out from the sensor were developed and implemented. Obtained results show a potential application of SPR-based dosemeter for dose measurements/mapping in steep gradient fields and/or large area fields. PMID:26535002

  14. Power of surface-based DNA computation

    SciTech Connect

    Cai, Weiping; Condon, A.E.; Corn, R.M.

    1997-12-01

    A new model of DNA computation that is based on surface chemistry is studied. Such computations involve the manipulation of DNA strands that are immobilized on a surface, rather than in solution as in the work of Adleman. Surface-based chemistry has been a critical technology in many recent advances in biochemistry and offers several advantages over solution-based chemistry, including simplified handling of samples and elimination of loss of strands, which reduce error in the computation. The main contribution of this paper is in showing that in principle, surface-based DNA chemistry can efficiently support general circuit computation on many inputs in parallel. To do this, an abstract model of computation that allows parallel manipulation of binary inputs is described. It is then shown that this model can be implemented by encoding inputs as DNA strands and repeatedly modifying the strands in parallel on a surface, using the chemical processes of hybridization, exonuclease degradation, polymerase extension, and ligation. Thirdly, it is shown that the model supports efficient circuit simulation in the following sense: exactly those inputs that satisfy a circuit can be isolated and the number of parallel operations needed to do this is proportional to the size of the circuit. Finally, results are presented on the power of the model when another resource of DNA computation is limited, namely strand length. 12 refs.

  15. A fast and accurate FPGA based QRS detection system.

    PubMed

    Shukla, Ashish; Macchiarulo, Luca

    2008-01-01

    An accurate Field Programmable Gate Array (FPGA) based ECG Analysis system is described in this paper. The design, based on a popular software based QRS detection algorithm, calculates the threshold value for the next peak detection cycle, from the median of eight previously detected peaks. The hardware design has accuracy in excess of 96% in detecting the beats correctly when tested with a subset of five 30 minute data records obtained from the MIT-BIH Arrhythmia database. The design, implemented using a proprietary design tool (System Generator), is an extension of our previous work and uses 76% resources available in a small-sized FPGA device (Xilinx Spartan xc3s500), has a higher detection accuracy as compared to our previous design and takes almost half the analysis time in comparison to software based approach. PMID:19163797

  16. Excitation of surface and volume plasmons in a metal nanosphere by fast electrons

    NASA Astrophysics Data System (ADS)

    Gildenburg, V. B.; Kostin, V. A.; Pavlichenko, I. A.

    2016-03-01

    Collective multipole oscillations (surface and volume plasmons) excited in a metal nanosphere by moving electron and corresponding inelastic scattering spectra are studied based on the hydrodynamic approach. Along with the bulk (dielectric) losses traditionally taken into account, the surface and radiative ones are also considered as the physical mechanisms responsible for the plasmon damping. The second and third mechanisms are found to be essential for the surface plasmons (at small or large cluster radii, respectively) and depend very differently on the multipole mode order. The differential equations are obtained which describe the temporal evolution of every particular mode as that one of a linear oscillator excited by the given external force, and the electron energy loss spectra are calculated. The changes in spectrum shape with the impact parameter and with the electron passage time are analyzed; the first of them is found to be in good enough agreement with the data of scanning transmission electron microscopy experiments. It is shown that, in the general case, a pronounced contribution to the formation of the loss spectrum is given by the both surface and volume plasmons with low and high multipole indices. In particular, at long electron passage time, the integral (averaged over the impact parameter) loss spectrum which is calculated for the free-electron cluster model contains two main peaks: a broad peak from merging of many high-order multipole resonances of the surface plasmons and a narrower peak of nearly the same height from merged volume plasmons excited by the electrons that travel through the central region of the cluster. Comparatively complex dependences of the calculated excitation coefficients and damping constants of various plasmons on the order of the excited multipole result in wide diversity of possible types of the loss spectrum even for the same cluster material and should be taken into account in interpretation of corresponding

  17. Fast Numerical Algorithms for 3-D Scattering from PEC and Dielectric Random Rough Surfaces in Microwave Remote Sensing

    NASA Astrophysics Data System (ADS)

    Zhang, Lisha

    We present fast and robust numerical algorithms for 3-D scattering from perfectly electrical conducting (PEC) and dielectric random rough surfaces in microwave remote sensing. The Coifman wavelets or Coiflets are employed to implement Galerkin's procedure in the method of moments (MoM). Due to the high-precision one-point quadrature, the Coiflets yield fast evaluations of the most off-diagonal entries, reducing the matrix fill effort from O(N2) to O( N). The orthogonality and Riesz basis of the Coiflets generate well conditioned impedance matrix, with rapid convergence for the conjugate gradient solver. The resulting impedance matrix is further sparsified by the matrix-formed standard fast wavelet transform (SFWT). By properly selecting multiresolution levels of the total transformation matrix, the solution precision can be enhanced while matrix sparsity and memory consumption have not been noticeably sacrificed. The unified fast scattering algorithm for dielectric random rough surfaces can asymptotically reduce to the PEC case when the loss tangent grows extremely large. Numerical results demonstrate that the reduced PEC model does not suffer from ill-posed problems. Compared with previous publications and laboratory measurements, good agreement is observed.

  18. Near midplane scintillator-based fast ion loss detector on DIII-D

    SciTech Connect

    Chen, X.; Heidbrink, W. W.; Fisher, R. K.; Pace, D. C.; Chavez, J. A.; Van Zeeland, M. A.; Garcia-Munoz, M.

    2012-10-15

    A new scintillator-based fast-ion loss detector (FILD) installed near the outer midplane of the plasma has been commissioned on DIII-D. This detector successfully measures coherent fast ion losses produced by fast-ion driven instabilities ({<=}500 kHz). Combined with the first FILD at {approx}45 Degree-Sign below the outer midplane [R. K. Fisher, et al., Rev. Sci. Instrum. 81, 10D307 (2010)], the two-detector system measures poloidal variation of losses. The phase space sensitivity of the new detector (gyroradius r{sub L}{approx}[1.5-8] cm and pitch angle {alpha}{approx}[35 Degree-Sign -85 Degree-Sign ]) is calibrated using neutral beam first orbit loss measurements. Since fast ion losses are localized poloidally, having two FILDs at different poloidal locations allows for the study of losses over a wider range of plasma shapes and types of loss orbits.

  19. Surface modification of polypropylene based particle foams

    NASA Astrophysics Data System (ADS)

    Schreier, P.; Trassl, C.; Altstädt, V.

    2014-05-01

    This paper deals with the modification of the surface properties of expanded polypropylene (EPP). EPP is a semi-hard to soft elastic thermoplastic foam. The characteristic surface of EPP shows process-related steam nozzle imprints and gussets. Therefore EPP does not satisfy the quality requirements for visible automotive applications. In order to meet these demands, plastic surfaces are usually enhanced with functional or decorative coatings, e.g. textiles, plastic films or paint. The coating of plastics with low surface energies such as PP often leads to adhesion problems by reason of the missing polar and functional groups. This paper gives an evaluation of activation and pre-treatment methods of EPP, with the aim to identify the most suitable pre-treatment method. For this purpose five typical surface treatment methods - flame treatment, corona, fluorination, atmospheric and low-pressure plasma - were performed on EPP samples. As a comparison criterion the maximum increase in the adhesion force between a polyurethane-based coating and the modified EPP substrate was selected. Moreover the influence of the selected pre-treatment method on the increase in the total surface energy and its polar component was investigated by the drop shape analysis method. The results showed that the contact angle measurement is a suitable method to determine the polar and disperse fractions of the surface tension of EPP. Furthermore, all performed methods increased the adhesion of EPP.

  20. Fast Fragmentation of Networks Using Module-Based Attacks.

    PubMed

    Requião da Cunha, Bruno; González-Avella, Juan Carlos; Gonçalves, Sebastián

    2015-01-01

    In the multidisciplinary field of Network Science, optimization of procedures for efficiently breaking complex networks is attracting much attention from a practical point of view. In this contribution, we present a module-based method to efficiently fragment complex networks. The procedure firstly identifies topological communities through which the network can be represented using a well established heuristic algorithm of community finding. Then only the nodes that participate of inter-community links are removed in descending order of their betweenness centrality. We illustrate the method by applying it to a variety of examples in the social, infrastructure, and biological fields. It is shown that the module-based approach always outperforms targeted attacks to vertices based on node degree or betweenness centrality rankings, with gains in efficiency strongly related to the modularity of the network. Remarkably, in the US power grid case, by deleting 3% of the nodes, the proposed method breaks the original network in fragments which are twenty times smaller in size than the fragments left by betweenness-based attack. PMID:26569610

  1. Fast Fragmentation of Networks Using Module-Based Attacks

    PubMed Central

    Requião da Cunha, Bruno; González-Avella, Juan Carlos; Gonçalves, Sebastián

    2015-01-01

    In the multidisciplinary field of Network Science, optimization of procedures for efficiently breaking complex networks is attracting much attention from a practical point of view. In this contribution, we present a module-based method to efficiently fragment complex networks. The procedure firstly identifies topological communities through which the network can be represented using a well established heuristic algorithm of community finding. Then only the nodes that participate of inter-community links are removed in descending order of their betweenness centrality. We illustrate the method by applying it to a variety of examples in the social, infrastructure, and biological fields. It is shown that the module-based approach always outperforms targeted attacks to vertices based on node degree or betweenness centrality rankings, with gains in efficiency strongly related to the modularity of the network. Remarkably, in the US power grid case, by deleting 3% of the nodes, the proposed method breaks the original network in fragments which are twenty times smaller in size than the fragments left by betweenness-based attack. PMID:26569610

  2. Fast Marching Tree: a Fast Marching Sampling-Based Method for Optimal Motion Planning in Many Dimensions*

    PubMed Central

    Janson, Lucas; Schmerling, Edward; Clark, Ashley; Pavone, Marco

    2015-01-01

    In this paper we present a novel probabilistic sampling-based motion planning algorithm called the Fast Marching Tree algorithm (FMT*). The algorithm is specifically aimed at solving complex motion planning problems in high-dimensional configuration spaces. This algorithm is proven to be asymptotically optimal and is shown to converge to an optimal solution faster than its state-of-the-art counterparts, chiefly PRM* and RRT*. The FMT* algorithm performs a “lazy” dynamic programming recursion on a predetermined number of probabilistically-drawn samples to grow a tree of paths, which moves steadily outward in cost-to-arrive space. As such, this algorithm combines features of both single-query algorithms (chiefly RRT) and multiple-query algorithms (chiefly PRM), and is reminiscent of the Fast Marching Method for the solution of Eikonal equations. As a departure from previous analysis approaches that are based on the notion of almost sure convergence, the FMT* algorithm is analyzed under the notion of convergence in probability: the extra mathematical flexibility of this approach allows for convergence rate bounds—the first in the field of optimal sampling-based motion planning. Specifically, for a certain selection of tuning parameters and configuration spaces, we obtain a convergence rate bound of order O(n−1/d+ρ), where n is the number of sampled points, d is the dimension of the configuration space, and ρ is an arbitrarily small constant. We go on to demonstrate asymptotic optimality for a number of variations on FMT*, namely when the configuration space is sampled non-uniformly, when the cost is not arc length, and when connections are made based on the number of nearest neighbors instead of a fixed connection radius. Numerical experiments over a range of dimensions and obstacle configurations confirm our the-oretical and heuristic arguments by showing that FMT*, for a given execution time, returns substantially better solutions than either PRM* or RRT

  3. Design and initial operation of lost fast-ion probe based on thin Faraday films in CHS

    SciTech Connect

    Isobe, M.; Goto, K.; Toi, K.; Nagaoka, K.; Suzuki, C.; Yoshimura, Y.; Akiyama, T.; Nishimura, S.; Shimizu, A.; Nishiura, M.; Matsuoka, K.; Okamura, S.; Darrow, D. S.; CHS Team

    2006-10-15

    The purpose of this work is to measure lost fast ions as an ion current so as to make quantitative argument on flux of fast-ion loss possible. We have designed and constructed a lost fast-ion probe based on combination of thin Faraday films and small rectangular apertures, called FLIP, for the Compact Helical System. The current generated by escaping fast ions has been successfully measured with the FLIP in neutral-beam-heated plasmas. The FLIP detected increased flux of escaping fast ions while fast-ion-driven magnetohydrodynamics instabilities appear.

  4. Energy loss and electron emission during grazing scattering of fast noble gas atoms from an Al(1 1 1) surface

    NASA Astrophysics Data System (ADS)

    Lederer, S.; Winter, H.; Winter, HP.

    2007-05-01

    Electron loss and electron emission for grazing impact of noble gas atoms with energies in the keV domain are investigated via time-of-flight spectra recorded in coincidence with the number of emitted electrons. The data is analyzed in terms of computer simulations concerning the interaction of the fast atoms with the electron gas in the selvedge of the Al(1 1 1) surface. The interaction is approximated by binary collisions of the fast atoms with Fermi electrons of the conduction band and differential cross sections obtained for electron scattering from free atoms. For an effective number of collisions of about 50 the energy loss spectra are fairly well reproduced by our calculations. We show that for our conditions the shift of the energy spectra for the emission of an additional electron from the surface is close to the work function of the target.

  5. A Fast Method of Deriving the Kirchhoff Formula for Moving Surfaces

    NASA Technical Reports Server (NTRS)

    Farassat, F.; Posey, Joe W.

    2007-01-01

    The Kirchhoff formula for a moving surface is very useful in many wave propagation problems, particularly in the prediction of noise from rotating machinery. Several publications in the last two decades have presented derivations of the Kirchhoff formula for moving surfaces in both time and frequency domains. Here we present a method originally developed by Farassat and Myers in time domain that is both simple and direct. It is based on generalized function theory and the useful concept of imbedding the problem in the unbounded three-dimensional space. We derive an inhomogeneous wave equation with the source terms that involve Dirac delta functions with their supports on the moving data surface. This wave equation is then solved using the simple free space Green's function of the wave equation resulting in the Kirchhoff formula. The algebraic manipulations are minimal and simple. We do not need the Green's theorem in four dimensions and there is no ambiguity in the interpretation of any terms in the final formulas. Furthermore, this method also gives the simplest derivation of the classical Kirchhoff formula which has a fairly lengthy derivation in physics and applied mathematics books. The Farassat-Myers method can be used easily in frequency domain.

  6. Fast vision-based catheter 3D reconstruction.

    PubMed

    Moradi Dalvand, Mohsen; Nahavandi, Saeid; Howe, Robert D

    2016-07-21

    Continuum robots offer better maneuverability and inherent compliance and are well-suited for surgical applications as catheters, where gentle interaction with the environment is desired. However, sensing their shape and tip position is a challenge as traditional sensors can not be employed in the way they are in rigid robotic manipulators. In this paper, a high speed vision-based shape sensing algorithm for real-time 3D reconstruction of continuum robots based on the views of two arbitrary positioned cameras is presented. The algorithm is based on the closed-form analytical solution of the reconstruction of quadratic curves in 3D space from two arbitrary perspective projections. High-speed image processing algorithms are developed for the segmentation and feature extraction from the images. The proposed algorithms are experimentally validated for accuracy by measuring the tip position, length and bending and orientation angles for known circular and elliptical catheter shaped tubes. Sensitivity analysis is also carried out to evaluate the robustness of the algorithm. Experimental results demonstrate good accuracy (maximum errors of  ±0.6 mm and  ±0.5 deg), performance (200 Hz), and robustness (maximum absolute error of 1.74 mm, 3.64 deg for the added noises) of the proposed high speed algorithms. PMID:27352011

  7. Fast dictionary-based reconstruction for diffusion spectrum imaging.

    PubMed

    Bilgic, Berkin; Chatnuntawech, Itthi; Setsompop, Kawin; Cauley, Stephen F; Yendiki, Anastasia; Wald, Lawrence L; Adalsteinsson, Elfar

    2013-11-01

    Diffusion spectrum imaging reveals detailed local diffusion properties at the expense of substantially long imaging times. It is possible to accelerate acquisition by undersampling in q-space, followed by image reconstruction that exploits prior knowledge on the diffusion probability density functions (pdfs). Previously proposed methods impose this prior in the form of sparsity under wavelet and total variation transforms, or under adaptive dictionaries that are trained on example datasets to maximize the sparsity of the representation. These compressed sensing (CS) methods require full-brain processing times on the order of hours using MATLAB running on a workstation. This work presents two dictionary-based reconstruction techniques that use analytical solutions, and are two orders of magnitude faster than the previously proposed dictionary-based CS approach. The first method generates a dictionary from the training data using principal component analysis (PCA), and performs the reconstruction in the PCA space. The second proposed method applies reconstruction using pseudoinverse with Tikhonov regularization with respect to a dictionary. This dictionary can either be obtained using the K-SVD algorithm, or it can simply be the training dataset of pdfs without any training. All of the proposed methods achieve reconstruction times on the order of seconds per imaging slice, and have reconstruction quality comparable to that of dictionary-based CS algorithm. PMID:23846466

  8. Fast vision-based catheter 3D reconstruction

    NASA Astrophysics Data System (ADS)

    Moradi Dalvand, Mohsen; Nahavandi, Saeid; Howe, Robert D.

    2016-07-01

    Continuum robots offer better maneuverability and inherent compliance and are well-suited for surgical applications as catheters, where gentle interaction with the environment is desired. However, sensing their shape and tip position is a challenge as traditional sensors can not be employed in the way they are in rigid robotic manipulators. In this paper, a high speed vision-based shape sensing algorithm for real-time 3D reconstruction of continuum robots based on the views of two arbitrary positioned cameras is presented. The algorithm is based on the closed-form analytical solution of the reconstruction of quadratic curves in 3D space from two arbitrary perspective projections. High-speed image processing algorithms are developed for the segmentation and feature extraction from the images. The proposed algorithms are experimentally validated for accuracy by measuring the tip position, length and bending and orientation angles for known circular and elliptical catheter shaped tubes. Sensitivity analysis is also carried out to evaluate the robustness of the algorithm. Experimental results demonstrate good accuracy (maximum errors of  ±0.6 mm and  ±0.5 deg), performance (200 Hz), and robustness (maximum absolute error of 1.74 mm, 3.64 deg for the added noises) of the proposed high speed algorithms.

  9. Fast optical recording media based on semiconductor nanostructures for image recording and processing

    SciTech Connect

    Kasherininov, P. G. Tomasov, A. A.

    2008-11-15

    Fast optical recording media based on semiconductor nanostructures (CdTe, GaAs) for image recording and processing with a speed to 10{sup 6} cycle/s (which exceeds the speed of known recording media based on metal-insulator-semiconductor-(liquid crystal) (MIS-LC) structures by two to three orders of magnitude), a photosensitivity of 10{sup -2}V/cm{sup 2}, and a spatial resolution of 5-10 (line pairs)/mm are developed. Operating principles of nanostructures as fast optical recording media and methods for reading images recorded in such media are described. Fast optical processors for recording images in incoherent light based on CdTe crystal nanostructures are implemented. The possibility of their application to fabricate image correlators is shown.

  10. GPGPU-based surface inspection from structured white light

    NASA Astrophysics Data System (ADS)

    Bordallo López, Miguel; Niemelä, Karri; Silvén, Olli

    2012-03-01

    Automatic surface inspection has been used in the industry to reliably detect all kinds of surface defects and to measure the overall quality of a produced piece. Structured light systems (SLS) are based on the reconstruction of the 3D information of a selected area by projecting several phase-shifted sinusoidal patterns onto a surface. Due to the high speed of production lines, surface inspection systems require extremely fast imaging methods and lots of computational power. The cost of such systems can easily become considerable. The use of standard PCs and Graphics Processing Units (GPUs) for data processing tasks facilitates the construction of cost-effective systems. We present a parallel implementation of the required algorithms written in C with CUDA extensions. In our contribution, we describe the challenges of the design on a GPU, compared with a traditional CPU implementation. We provide a qualitative evaluation of the results and a comparison of the algorithm speed performance on several platforms. The system is able to compute two megapixels height maps with 100 micrometers spatial resolution in less than 200ms on a mid-budget laptop. Our GPU implementation runs about ten times faster than our previous C code implementation.

  11. Precision Fabrication of a Large-Area Sinusoidal Surface Using a Fast-Tool-Servo Technique ─Improvement of Local Fabrication Accuracy─

    NASA Astrophysics Data System (ADS)

    Gao, Wei; Tano, Makoto; Araki, Takeshi; Kiyono, Satoshi

    This paper describes a diamond turning fabrication system for a sinusoidal grid surface. The wavelength and amplitude of the sinusoidal wave in each direction are 100µm and 100nm, respectively. The fabrication system, which is based on a fast-tool-servo (FTS), has the ability to generate the angle grid surface over an area of φ 150mm. This paper focuses on the improvement of the local fabrication accuracy. The areas considered are each approximately 1 × 1mm, and can be imaged by an interference microscope. Specific fabrication errors of the manufacturing process, caused by the round nose geometry of the diamond cutting tool and the data digitization, are successfully identified by Discrete Fourier Transform of the microscope images. Compensation processes are carried out to reduce the errors. As a result, the fabrication errors in local areas of the angle grid surface are reduced by 1/10.

  12. Fast magneto-optic switch based on nanosecond pulses

    NASA Astrophysics Data System (ADS)

    Weng, Zi-Hua; Ruan, Jian-Jian; Lin, Shao-Han; Chen, Zhi-Min

    2011-09-01

    The paper studies an all fiber high-speed magneto-optic switch which includes an optical route, a nanosecond pulse generator, and a magnetic field module in order to reduce the switching time of the optical switch in the all optical network. A compact nanosecond pulse generator can be designed based on the special character of the avalanche transistor. The output current pulse of the nanosecond pulse generator is less than 5 ns, while the pulse amplitude is more than 100 V and the pulse width is about 10 to 20 ns, which is able to drive a high-speed magnetic field. A solenoid is used as the magnetic field module, and a bismuth-substituted rare-earth iron garnet single crystal is chosen as the Faraday rotator. By changing the direction of current in the solenoid quickly, the magnetization of the magneto-optic material is reversed, and the optical beam can be rapidly switched. The experimental results indicate that the switching time of the device is about 100 to 400 ns, which can partially meet the demand of the rapid development of the all optical network.

  13. Fast content-based image retrieval using dynamic cluster tree

    NASA Astrophysics Data System (ADS)

    Chen, Jinyan; Sun, Jizhou; Wu, Rongteng; Zhang, Yaping

    2008-03-01

    A novel content-based image retrieval data structure is developed in present work. It can improve the searching efficiency significantly. All images are organized into a tree, in which every node is comprised of images with similar features. Images in a children node have more similarity (less variance) within themselves in relative to its parent. It means that every node is a cluster and each of its children nodes is a sub-cluster. Information contained in a node includes not only the number of images, but also the center and the variance of these images. Upon the addition of new images, the tree structure is capable of dynamically changing to ensure the minimization of total variance of the tree. Subsequently, a heuristic method has been designed to retrieve the information from this tree. Given a sample image, the probability of a tree node that contains the similar images is computed using the center of the node and its variance. If the probability is higher than a certain threshold, this node will be recursively checked to locate the similar images. So will its children nodes if their probability is also higher than that threshold. If no sufficient similar images were founded, a reduced threshold value would be adopted to initiate a new seeking from the root node. The search terminates when it found sufficient similar images or the threshold value is too low to give meaningful sense. Experiments have shown that the proposed dynamic cluster tree is able to improve the searching efficiency notably.

  14. Micro-TLC Approach for Fast Screening of Environmental Samples Derived from Surface and Sewage Waters.

    PubMed

    Zarzycki, Paweł K; Slączka, Magdalena M; Włodarczyk, Elżbieta; Baran, Michał J

    2013-01-01

    In this work we demonstrated analytical capability of micro-planar (micro-TLC) technique comprising one and two-dimensional (2D) separation modes to generate fingerprints of environmental samples originated from sewage and ecosystems waters. We showed that elaborated separation and detection protocols are complementary to previously invented HPLC method based on temperature-dependent inclusion chromatography and UV-DAD detection. Presented 1D and 2D micro-TLC chromatograms of SPE (solid-phase extraction) extracts were optimized for fast and low-cost screening of water samples collected from lakes and rivers located in the area of Middle Pomerania in northern part of Poland. Moreover, we studied highly organic compounds loaded in the treated and untreated sewage waters obtained from municipal wastewater treatment plant "Jamno" near Koszalin City (Poland). Analyzed environmental samples contained number of substances characterized by polarity range from estetrol to progesterone as well as chlorophyll-related dyes previously isolated and pre-purified by simple SPE protocol involving C18 cartridges. Optimization of micro-TLC separation and quantification protocols of such samples were discussed from the practical point of view using simple separation efficiency criteria including total peaks number, log(product ΔhR F), signal intensity and peak asymmetry. Outcomes of the presented analytical approach, especially using detection involving direct fluorescence (UV366/Vis) and phosphomolybdic acid (PMA) visualization are compared with UV-DAD HPLC-generated data reported previously. Chemometric investigation based on principal components analysis revealed that SPE extracts separated by micro-TLC and detected under fluorescence and PMA visualization modes can be used for robust sample fingerprinting even after long-term storage of the extracts (up to 4 years) at subambient temperature (-20 °C). Such approach allows characterization of wide range of sample components that

  15. Fast characterization of functionalized silica materials by silicon-29 surface-enhanced NMR spectroscopy using dynamic nuclear polarization.

    PubMed

    Lelli, Moreno; Gajan, David; Lesage, Anne; Caporini, Marc A; Vitzthum, Veronika; Miéville, Pascal; Héroguel, Florent; Rascón, Fernando; Roussey, Arthur; Thieuleux, Chloé; Boualleg, Malika; Veyre, Laurent; Bodenhausen, Geoffrey; Copéret, Christophe; Emsley, Lyndon

    2011-02-23

    We demonstrate fast characterization of the distribution of surface bonding modes and interactions in a series of functionalized materials via surface-enhanced nuclear magnetic resonance spectroscopy using dynamic nuclear polarization (DNP). Surface-enhanced silicon-29 DNP NMR spectra were obtained by using incipient wetness impregnation of the sample with a solution containing a polarizing radical (TOTAPOL). We identify and compare the bonding topology of functional groups in materials obtained via a sol-gel process and in materials prepared by post-grafting reactions. Furthermore, the remarkable gain in time provided by surface-enhanced silicon-29 DNP NMR spectroscopy (typically on the order of a factor 400) allows the facile acquisition of two-dimensional correlation spectra. PMID:21280606

  16. Fast fault-tolerant decoder for qubit and qudit surface codes

    NASA Astrophysics Data System (ADS)

    Watson, Fern H. E.; Anwar, Hussain; Browne, Dan E.

    2015-09-01

    The surface code is one of the most promising candidates for combating errors in large scale fault-tolerant quantum computation. A fault-tolerant decoder is a vital part of the error correction process—it is the algorithm which computes the operations needed to correct or compensate for the errors according to the measured syndrome, even when the measurement itself is error prone. Previously decoders based on minimum-weight perfect matching have been studied. However, these are not immediately generalizable from qubit to qudit codes. In this work, we develop a fault-tolerant decoder for the surface code, capable of efficient operation for qubits and qudits of any dimension, generalizing the decoder first introduced by Bravyi and Haah [Phys. Rev. Lett. 111, 200501 (2013), 10.1103/PhysRevLett.111.200501]. We study its performance when both the physical qudits and the syndromes measurements are subject to generalized uncorrelated bit-flip noise (and the higher-dimensional equivalent). We show that, with appropriate enhancements to the decoder and a high enough qudit dimension, a threshold at an error rate of more than 8 % can be achieved.

  17. A Fast and Robust Poisson-Boltzmann Solver Based on Adaptive Cartesian Grids.

    PubMed

    Boschitsch, Alexander H; Fenley, Marcia O

    2011-05-10

    An adaptive Cartesian grid (ACG) concept is presented for the fast and robust numerical solution of the 3D Poisson-Boltzmann Equation (PBE) governing the electrostatic interactions of large-scale biomolecules and highly charged multi-biomolecular assemblies such as ribosomes and viruses. The ACG offers numerous advantages over competing grid topologies such as regular 3D lattices and unstructured grids. For very large biological molecules and multi-biomolecule assemblies, the total number of grid-points is several orders of magnitude less than that required in a conventional lattice grid used in the current PBE solvers thus allowing the end user to obtain accurate and stable nonlinear PBE solutions on a desktop computer. Compared to tetrahedral-based unstructured grids, ACG offers a simpler hierarchical grid structure, which is naturally suited to multigrid, relieves indirect addressing requirements and uses fewer neighboring nodes in the finite difference stencils. Construction of the ACG and determination of the dielectric/ionic maps are straightforward, fast and require minimal user intervention. Charge singularities are eliminated by reformulating the problem to produce the reaction field potential in the molecular interior and the total electrostatic potential in the exterior ionic solvent region. This approach minimizes grid-dependency and alleviates the need for fine grid spacing near atomic charge sites. The technical portion of this paper contains three parts. First, the ACG and its construction for general biomolecular geometries are described. Next, a discrete approximation to the PBE upon this mesh is derived. Finally, the overall solution procedure and multigrid implementation are summarized. Results obtained with the ACG-based PBE solver are presented for: (i) a low dielectric spherical cavity, containing interior point charges, embedded in a high dielectric ionic solvent - analytical solutions are available for this case, thus allowing rigorous

  18. Common and Specific Factors Approaches to Home-Based Treatment: I-FAST and MST

    ERIC Educational Resources Information Center

    Lee, Mo Yee; Greene, Gilbert J.; Fraser, J. Scott; Edwards, Shivani G.; Grove, David; Solovey, Andrew D.; Scott, Pamela

    2013-01-01

    Objectives: This study examined the treatment outcomes of integrated families and systems treatment (I-FAST), a moderated common factors approach, in reference to multisystemic therapy (MST), an established specific factor approach, for treating at risk children and adolescents and their families in an intensive community-based setting. Method:…

  19. Fast neutron mutants database and web displays at SoyBase

    Technology Transfer Automated Retrieval System (TEKTRAN)

    SoyBase, the USDA-ARS soybean genetics and genomics database, has been expanded to include data for the fast neutron mutants produced by Bolon, Vance, et al. In addition to the expected text and sequence homology searches and visualization of the indels in the context of the genome sequence viewer, ...

  20. Design Considerations of Fast-cycling Synchrotrons Based on Superconducting Transmission Line Magnets

    SciTech Connect

    Piekarz, H.; Hays, S.; Huang, Y.; Shiltsev, V.; /Fermilab

    2008-06-01

    Fast-cycling synchrotrons are key instruments for accelerator based nuclear and high-energy physics programs. We explore a possibility to construct fast-cycling synchrotrons by using super-ferric, {approx}2 Tesla B-field dipole magnets powered with a superconducting transmission line. We outline both the low temperature (LTS) and the high temperature (HTS) superconductor design options and consider dynamic power losses for an accelerator with operation cycle of 0.5 Hz. We also briefly outline possible power supply system for such accelerator, and discuss the quench protection system for the magnet string powered by a transmission line conductor.

  1. Fast-moving target tracking system based on CMOS image sensor

    NASA Astrophysics Data System (ADS)

    Miao, Zhun; Jiang, Jie; Zhang, Guangjun

    2008-10-01

    This paper introduces a fast-moving target tracking system based on CMOS (Complementary Metal-Oxygen Semiconductor) image sensor. A pipeline parallel architecture of region segmentation and first order moment algorithms on FPGA (Field Programmable Gate Array) platform enables driving the high frame rate CMOS image sensor and processing real-time images at the same time, extracting coordinates of the bright target spots in the high-rate consecutive image frames. In the end of this paper, an experiment proved that this system performs well in tracking fast-moving target in satisfying demand of speed and accuracy.

  2. Efficient Fast Stereo Acoustic Echo Cancellation Based on Pairwise Optimal Weight Realization Technique

    NASA Astrophysics Data System (ADS)

    Yukawa, Masahiro; Murakoshi, Noriaki; Yamada, Isao

    2006-12-01

    In stereophonic acoustic echo cancellation (SAEC) problem, fast and accurate tracking of echo path is strongly required for stable echo cancellation. In this paper, we propose a class of efficient fast SAEC schemes with linear computational complexity (with respect to filter length). The proposed schemes are based on pairwise optimal weight realization (POWER) technique, thus realizing a "best" strategy (in the sense of pairwise and worst-case optimization) to use multiple-state information obtained by preprocessing. Numerical examples demonstrate that the proposed schemes significantly improve the convergence behavior compared with conventional methods in terms of system mismatch as well as echo return loss enhancement (ERLE).

  3. Ultra Fast X-ray Streak Camera for TIM Based Platforms

    SciTech Connect

    Marley, E; Shepherd, R; Fulkerson, E S; James, L; Emig, J; Norman, D

    2012-05-02

    Ultra fast x-ray streak cameras are a staple for time resolved x-ray measurements. There is a need for a ten inch manipulator (TIM) based streak camera that can be fielded in a newer large scale laser facility. The LLNL ultra fast streak camera's drive electronics have been upgraded and redesigned to fit inside a TIM tube. The camera also has a new user interface that allows for remote control and data acquisition. The system has been outfitted with a new sensor package that gives the user more operational awareness and control.

  4. Detection of fast neutrons using detectors based on semi-insulating GaAs

    NASA Astrophysics Data System (ADS)

    Zat'ko, B.; Sedlačková, K.; Dubecký, F.; Boháček, P.; Sekáčová, M.; Nečas, V.

    2011-12-01

    Detectors with AuZn square Schottky contact of the area of 2.5 × 2.5 mm2 were fabricated. On the back side, the whole area AuGeNi eutectic ohmic contact was evaporated. The thickness of the base material (semi-insulating GaAs) was 220 μm. The connection of 4 detectors in parallel was tested to get the detection area of 25 mm2. The 239Pu-Be fast neutron source with energies between 0.5 and 12 MeV was used in experimental measurements. We have investigated the optimal thickness of HDPE (high-density polyethylene) conversion layer for fast neutron detection. The spectra of the neutrons were measured by detectors covered by HDPE converter of different thicknesses. The fast neutron detection efficiency proved experimentally was compared with results from simulations performed by MCNPX (Monte Carlo N-Particle eXtended) code.

  5. Fast atom diffraction from a β-Ga{sub 2}O{sub 3}(100) surface

    SciTech Connect

    Busch, M.; Meyer, E.; Winter, H.; Irmscher, K.; Galazka, Z.; Gärtner, K.

    2014-08-04

    Fast H, He atoms, and H{sub 2} molecules with projectile energies ranging from 200 eV up to 3 keV were scattered under a grazing angle of incidence from a clean and flat β-Ga{sub 2}O{sub 3}(100) surface. The bulk single crystal was grown by the Czochralski method and prepared via annealing under ultra-high vacuum conditions. For scattering along low-index directions, we observed defined diffraction patterns in the angular distributions for scattered projectiles. From the analysis of diffraction patterns, we derive the surface unit cell in good accord with the parameters b and c for the lattice of the bulk crystal and derive information on the termination of the surface.

  6. Fast and accurate circle detection using gradient-direction-based segmentation.

    PubMed

    Wu, Jianping; Chen, Ke; Gao, Xiaohui

    2013-06-01

    We present what is to our knowledge the first-ever fitting-based circle detection algorithm, namely, the fast and accurate circle (FACILE) detection algorithm, based on gradient-direction-based edge clustering and direct least square fitting. Edges are segmented into sections based on gradient directions, and each section is validated separately; valid arcs are then fitted and further merged to extract more accurate circle information. We implemented the algorithm with the C++ language and compared it with four other algorithms. Testing on simulated data showed FACILE was far superior to the randomized Hough transform, standard Hough transform, and fast circle detection using gradient pair vectors with regard to processing speed and detection reliability. Testing on publicly available standard datasets showed FACILE outperformed robust and precise circular detection, a state-of-art arc detection method, by 35% with regard to recognition rate and is also a significant improvement over the latter in processing speed. PMID:24323106

  7. A fluctuation-induced plasma transport diagnostic based upon fast-Fourier transform spectral analysis

    NASA Technical Reports Server (NTRS)

    Powers, E. J.; Kim, Y. C.; Hong, J. Y.; Roth, J. R.; Krawczonek, W. M.

    1978-01-01

    A diagnostic, based on fast Fourier-transform spectral analysis techniques, that provides experimental insight into the relationship between the experimentally observable spectral characteristics of the fluctuations and the fluctuation-induced plasma transport is described. The model upon which the diagnostic technique is based and its experimental implementation is discussed. Some characteristic results obtained during the course of an experimental study of fluctuation-induced transport in the electric field dominated NASA Lewis bumpy torus plasma are presented.

  8. Fast computer simulation of reconstructed image from rainbow hologram based on GPU

    NASA Astrophysics Data System (ADS)

    Shuming, Jiao; Yoshikawa, Hiroshi

    2015-10-01

    A fast computer simulation solution for rainbow hologram reconstruction based on GPU is proposed. In the commonly used segment Fourier transform method for rainbow hologram reconstruction, the computation of 2D Fourier transform on each hologram segment is very time consuming. GPU-based parallel computing can be applied to improve the computing speed. Compared with CPU computing, simulation results indicate that our proposed GPU computing can effectively reduce the computation time by as much as eight times.

  9. A surface ice module for wind turbine dynamic response simulation using FAST

    DOE PAGESBeta

    Yu, Bingbin; Karr, Dale G.; Song, Huimin; Sirnivas, Senu

    2016-06-03

    It is a fact that developing offshore wind energy has become more and more serious worldwide in recent years. Many of the promising offshore wind farm locations are in cold regions that may have ice cover during wintertime. The challenge of possible ice loads on offshore wind turbines raises the demand of modeling capacity of dynamic wind turbine response under the joint action of ice, wind, wave, and current. The simulation software FAST is an open source computer-aided engineering (CAE) package maintained by the National Renewable Energy Laboratory. In this paper, a new module of FAST for assessing the dynamicmore » response of offshore wind turbines subjected to ice forcing is presented. In the ice module, several models are presented which involve both prescribed forcing and coupled response. For conditions in which the ice forcing is essentially decoupled from the structural response, ice forces are established from existing models for brittle and ductile ice failure. For conditions in which the ice failure and the structural response are coupled, such as lock-in conditions, a rate-dependent ice model is described, which is developed in conjunction with a new modularization framework for FAST. In this paper, analytical ice mechanics models are presented that incorporate ice floe forcing, deformation, and failure. For lower speeds, forces slowly build until the ice strength is reached and ice fails resulting in a quasi-static condition. For intermediate speeds, the ice failure can be coupled with the structural response and resulting in coinciding periods of the ice failure and the structural response. A third regime occurs at high speeds of encounter in which brittle fracturing of the ice feature occurs in a random pattern, which results in a random vibration excitation of the structure. An example wind turbine response is simulated under ice loading of each of the presented models. This module adds to FAST the capabilities for analyzing the response of wind

  10. A new fast accurate nonlinear medical image registration program including surface preserving regularization.

    PubMed

    Gruslys, Audrunas; Acosta-Cabronero, Julio; Nestor, Peter J; Williams, Guy B; Ansorge, Richard E

    2014-11-01

    Recently inexpensive graphical processing units (GPUs) have become established as a viable alternative to traditional CPUs for many medical image processing applications. GPUs offer the potential of very significant improvements in performance at low cost and with low power consumption. One way in which GPU programs differ from traditional CPU programs is that increasingly elaborate calculations per voxel may not impact of the overall processing time because memory accesses can dominate execution time. This paper presents a new GPU based elastic image registration program named Ezys. The Ezys image registration algorithm belongs to the wide class of diffeomorphic demons but uses surface preserving image smoothing and regularization filters designed for a GPU that would be computationally expensive on a CPU. We describe the methods used in Ezys and present results from two important neuroscience applications. Firstly inter-subject registration for transfer of anatomical labels and secondly longitudinal intra-subject registration to quantify atrophy in individual subjects. Both experiments showed that Ezys registration compares favorably with other popular elastic image registration programs. We believe Ezys is a useful tool for neuroscience and other applications, and also demonstrates the value of developing of novel image processing filters specifically designed for GPUs. PMID:24968094

  11. Fast-Response Calmodulin-Based Fluorescent Indicators Reveal Rapid Intracellular Calcium Dynamics

    PubMed Central

    Helassa, Nordine; Zhang, Xiao-hua; Conte, Ianina; Scaringi, John; Esposito, Elric; Bradley, Jonathan; Carter, Thomas; Ogden, David; Morad, Martin; Török, Katalin

    2015-01-01

    Faithful reporting of temporal patterns of intracellular Ca2+ dynamics requires the working range of indicators to match the signals. Current genetically encoded calmodulin-based fluorescent indicators are likely to distort fast Ca2+ signals by apparent saturation and integration due to their limiting fluorescence rise and decay kinetics. A series of probes was engineered with a range of Ca2+ affinities and accelerated kinetics by weakening the Ca2+-calmodulin-peptide interactions. At 37 °C, the GCaMP3-derived probe termed GCaMP3fast is 40-fold faster than GCaMP3 with Ca2+ decay and rise times, t1/2, of 3.3 ms and 0.9 ms, respectively, making it the fastest to-date. GCaMP3fast revealed discreet transients with significantly faster Ca2+ dynamics in neonatal cardiac myocytes than GCaMP6f. With 5-fold increased two-photon fluorescence cross-section for Ca2+ at 940 nm, GCaMP3fast is suitable for deep tissue studies. The green fluorescent protein serves as a reporter providing important novel insights into the kinetic mechanism of target recognition by calmodulin. Our strategy to match the probe to the signal by tuning the affinity and hence the Ca2+ kinetics of the indicator is applicable to the emerging new generations of calmodulin-based probes. PMID:26527405

  12. Scintillator-based diagnostic for fast ion loss measurements on DIII-D.

    PubMed

    Fisher, R K; Pace, D C; García-Muñoz, M; Heidbrink, W W; Muscatello, C M; Van Zeeland, M A; Zhu, Y B

    2010-10-01

    A new scintillator-based fast ion loss detector has been installed on DIII-D with the time response (>100 kHz) needed to study energetic ion losses induced by Alfvén eigenmodes and other MHD instabilities. Based on the design used on ASDEX Upgrade, the diagnostic measures the pitch angle and gyroradius of ion losses based on the position of the ions striking the two-dimensional scintillator. For fast time response measurements, a beam splitter and fiberoptics couple a portion of the scintillator light to a photomultiplier. Reverse orbit following techniques trace the lost ions to their possible origin within the plasma. Initial DIII-D results showing prompt losses and energetic ion loss due to MHD instabilities are discussed. PMID:21033833

  13. A Fast Na+/Ca2+-Based Action Potential in a Marine Diatom

    PubMed Central

    Taylor, Alison R.

    2009-01-01

    Background Electrical impulses in animals play essential roles in co-ordinating an array of physiological functions including movement, secretion, environmental sensing and development. Underpinning many of these electrical signals is a fast Na+-based action potential that has been fully characterised only in cells associated with the neuromuscular systems of multicellular animals. Such rapid action potentials are thought to have evolved with the first metazoans, with cnidarians being the earliest representatives. The present study demonstrates that a unicellular protist, the marine diatom Odontella sinensis, can also generate a fast Na+/Ca2+ based action potential that has remarkably similar biophysical and pharmacological properties to invertebrates and vertebrate cardiac and skeletal muscle cells. Methodology/Principal Findings The kinetic, ionic and pharmacological properties of the rapid diatom action potential were examined using single electrode current and voltage clamp techniques. Overall, the characteristics of the fast diatom currents most closely resemble those of vertebrate and invertebrate muscle Na+/Ca2+ currents. Conclusions/Significance This is the first demonstration of voltage-activated Na+ channels and the capacity to generate fast Na+-based action potentials in a unicellular photosynthetic organism. The biophysical and pharmacological characteristics together with the presence of a voltage activated Na+/Ca2+ channel homologue in the recently sequenced genome of the diatom Thalassiosira pseudonana, provides direct evidence supporting the hypothesis that this rapid signalling mechanism arose in ancestral unicellular eukaryotes and has been retained in at least two phylogenetically distant lineages of eukaryotes; opisthokonts and the stramenopiles. The functional role of the fast animal-like action potential in diatoms remains to be elucidated but is likely involved in rapid environmental sensing of these widespread and successful marine protists

  14. Effect of antenna geometry and plasma surface impedance on the directivity of fast wave antenna radiation

    SciTech Connect

    Heikkinen, J.A.; Pavlov, I.P.

    1996-02-01

    The fairly large poloidal directivity of a radiated fast wave spectrum related to the wave polarization relative to the ion gyration can be further enhanced by the nonperpendicular angle between the antenna current strap and the magnetic field. The latter is shown to be responsible also for the asymmetry in the parallel wavenumber spectrum of an unphased antenna, and can lead to deviations of order {le}30{percent} in the corresponding spectrum of a phased antenna array. The consequences of the observed effects to the antenna performance in the current drive applications as well as in excitation of poloidally asymmetric spectra are discussed. {copyright} {ital 1996 American Institute of Physics.}

  15. Novel method for fast characterization of high-surface-area electrocatalytic materials using carbon fiber microelectrode.

    SciTech Connect

    Strmcnik, D.; Hodnik, N.; Hocevar, S. B.; van der Vliet, D.; Zorko, M.; Stamenovic, V. R.; Pihlar, B.; Markovic, N. M.; Materials Science Division; National Inst. of Chemistry; Univ. Ljubljana

    2010-02-18

    A carbon fiber microelectrode (CFME) was used for characterization of the nanoparticle catalysts as an alternative to the well-established rotating disk electrode (RDE) method. We found that the novel CFME method yielded comparable results to the RDE method when investigating the adsorption/desorption processes as well the specific activity for reactions such as the oxygen reduction reaction. Its major advantage over the RDE method is a fast sample preparation and rapid measurement, reducing significantly the time of a single sample characterization from 2-3 h to a favorable 5-10 min.

  16. Fast and automatic depth control of iterative bone ablation based on optical coherence tomography data

    NASA Astrophysics Data System (ADS)

    Fuchs, Alexander; Pengel, Steffen; Bergmeier, Jan; Kahrs, Lüder A.; Ortmaier, Tobias

    2015-07-01

    Laser surgery is an established clinical procedure in dental applications, soft tissue ablation, and ophthalmology. The presented experimental set-up for closed-loop control of laser bone ablation addresses a feedback system and enables safe ablation towards anatomical structures that usually would have high risk of damage. This study is based on combined working volumes of optical coherence tomography (OCT) and Er:YAG cutting laser. High level of automation in fast image data processing and tissue treatment enables reproducible results and shortens the time in the operating room. For registration of the two coordinate systems a cross-like incision is ablated with the Er:YAG laser and segmented with OCT in three distances. The resulting Er:YAG coordinate system is reconstructed. A parameter list defines multiple sets of laser parameters including discrete and specific ablation rates as ablation model. The control algorithm uses this model to plan corrective laser paths for each set of laser parameters and dynamically adapts the distance of the laser focus. With this iterative control cycle consisting of image processing, path planning, ablation, and moistening of tissue the target geometry and desired depth are approximated until no further corrective laser paths can be set. The achieved depth stays within the tolerances of the parameter set with the smallest ablation rate. Specimen trials with fresh porcine bone have been conducted to prove the functionality of the developed concept. Flat bottom surfaces and sharp edges of the outline without visual signs of thermal damage verify the feasibility of automated, OCT controlled laser bone ablation with minimal process time.

  17. Surface Functionalization of Graphene-based Materials

    NASA Astrophysics Data System (ADS)

    Mathkar, Akshay

    Graphene-based materials have generated tremendous interest in the past decade. Manipulating their characteristics using wet-chemistry methods holds distinctive value, as it provides a means towards scaling up, while not being limited by yield. The majority of this thesis focuses on the surface functionalization of graphene oxide (GO), which has drawn tremendous attention as a tunable precursor due to its readily chemically manipulable surface and richly functionalized basal plane. Firstly, a room-temperature based method is presented to reduce GO stepwise, with each organic moiety being removed sequentially. Characterization confirms the carbonyl group to be reduced first, while the tertiary alcohol is reduced last, as the optical gap decrease from 3.5 eV down to 1 eV. This provides greater control over GO, which is an inhomogeneous system, and is the first study to elucidate the order of removal of each functional group. In addition to organically manipulating GO, this thesis also reports a chemical methodology to inorganically functionalize GO and tune its wetting characteristics. A chemical method to covalently attach fluorine atoms in the form of tertiary alkyl fluorides is reported, and confirmed by MAS 13C NMR, as two forms of fluorinated graphene oxide (FGO) with varying C/F and C/O ratios are synthesized. Introducing C-F bonds decreases the overall surface free energy, which drastically reduces GO's wetting behavior, especially in its highly fluorinated form. Ease of solution processing leads to development of sprayable inks that are deposited on a range of porous and nonporous surfaces to impart amphiphobicity. This is the first report that tunes the wetting characteristics of GO. Lastly as a part of a collaboration with ConocoPhillips, another class of carbon nanomaterials - carbon nanotubes (CNTs), have been inorganically functionalized to repel 30 wt% MEA, a critical solvent in CO 2 recovery. In addition to improving the solution processability of CNTs

  18. Hand gesture recognition based on surface electromyography.

    PubMed

    Samadani, Ali-Akbar; Kulic, Dana

    2014-01-01

    Human hands are the most dexterous of human limbs and hand gestures play an important role in non-verbal communication. Underlying electromyograms associated with hand gestures provide a wealth of information based on which varying hand gestures can be recognized. This paper develops an inter-individual hand gesture recognition model based on Hidden Markov models that receives surface electromyography (sEMG) signals as inputs and predicts a corresponding hand gesture. The developed recognition model is tested with a dataset of 10 various hand gestures performed by 25 subjects in a leave-one-subject-out cross validation and an inter-individual recognition rate of 79% was achieved. The promising recognition rate demonstrates the efficacy of the proposed approach for discriminating between gesture-specific sEMG signals and could inform the design of sEMG-controlled prostheses and assistive devices. PMID:25570917

  19. Supernumerary rainbows in the angular distribution of scattered projectiles for grazing collisions of fast atoms with a LiF(001) surface.

    PubMed

    Schüller, A; Winter, H

    2008-03-01

    Fast atoms with keV energies are scattered under a grazing angle of incidence from a clean and flat LiF(001) surface. For scattering along low index azimuthal directions within the surface plane ("axial surface channeling") we observe pronounced peak structures in the angular distributions for scattered projectiles that are attributed to "supernumerary rainbows." This phenomenon can be understood in the framework of quantum scattering only and is observed here up to projectile energies of 20 keV. We demonstrate that the interaction potential and, in particular, its corrugation for fast atomic projectiles at surfaces can be derived with a high accuracy. PMID:18352749

  20. Market-based control of active surfaces

    NASA Astrophysics Data System (ADS)

    Berlin, Andrew A.; Hogg, Tad; Jackson, Warren B.

    1998-12-01

    This paper describes a market-based approach to controlling a smart matter-based object transport system, in which an array of distributed air jets applies forces to levitate and control the motion of a planar object. In the smart matter regime, the effects of spatial and temporal variation of operating parameters among a multiplicity of sensor, actuators, and controllers make it desirable for a control strategy to exhibit a minimal dependence on system models, and to be able to arbitrate among conflicting goals. A market-based strategy is introduced that aggregates the control requirements of multiple relatively simple local controllers, each of which seeks to optimize the performance of the system within a limited spatial and temporal range. These local controllers act as the market's consumers, and two sets of distributed air jets act as the producers. Experiments are performed comparing the performance of the market-based strategy to a near-optimal model-derived benchmark, as well as to a hand-tuned PD controller. Results indicate that even though the local controllers in the market are not based on a detailed model of the system dynamics, the market is able to effectively approximate the performance of the model-based benchmark. In certain specialized cases, such as tracking a step trajectory, the performance of the market surpasses the performance of the model-based benchmark by balancing the needs of conflicting control goals. A brief overview of the active surface smart matter prototype being developed at Xerox PARC that is the motivation behind this work is also presented.

  1. Localized Surface Deformation Monitoring Applications using Ground Based Interferometric Radar

    NASA Astrophysics Data System (ADS)

    Legarsky, J. J.; Gomez, F. G.; Rosenblad, B.; Loehr, E.; Gurnani, G.; Fallert, Z.; Gilliam, J.

    2014-12-01

    Ground based interferometric radar (GBIR) measurements of localized surface deformation may be sought-after in various geosciences applications. The University of Missouri (MU) GBIR system is highly portable; moreover, it can be removed and re-positioned at the same point with geodetic-grade precision for long-term and repeat surveys. Initial quick-look imagery at C-band and Ku-band may be viewed in near real-time at the study site. Polarimetric calibration, radiometric calibration, and time-series analysis may further enhance the imagery. The MU GBIR has demonstrated millimeter and better sensitivity to localized surface deformation. Using real-aperture imaging and precision rotation, the MU GBIR acquires data by deploying three antennas that may be mounted parallel to one another on a 1-meter high tower. During typical operation, images are acquired by azimuthally rotating the GBIR antennas about its vertical axis. During deployment, the fast imaging capabilities allow a data collect scan in about 20 seconds for a 180 degree field of view. During the 2013 and 2014 field seasons using the MU GBIR, several locations were studied. The study sites include a rockfall experiment in Colorado, several dams in Kansas and Missouri, and a rock glacier in southern Colorado. Study results and additional progress will be presented. These projects are sponsored by grants from the University of Missouri Research Board and the National Science Foundation.

  2. A simple device for sub-aperture stitching of fast convex surfaces

    NASA Astrophysics Data System (ADS)

    Aguirre-Aguirre, D.; Izazaga-Pérez, R.; Villalobos-Mendoza, B.; Carrasco-Licea, E.; Granados-Agustin, F. S.; Percino-Zacarías, M. E.; Salazar-Morales, M. F.; Cruz-Zavala, E.

    2015-10-01

    In this work, we show a simple device that helps in the use of the sub-aperture stitching method for testing convex surfaces with large diameter and a small f/#. This device was designed at INAOE's Optical work shop to solve the problem that exists when a Newton Interferometer and the sub-aperture stitching method are used. It is well known that if the f/# of a surface is small, the slopes over the surface increases rapidly and this is critical for points far from the vertex. Therefore, if we use a reference master in the Newton interferometer to test a convex surface with a large diameter and an area far from the vertex, the master tends to slide causing scratches over the surface under test. To solve this problem, a device for mounting the surface under test with two freedom degrees, a rotating axis and a lever to tilt the surface, was designed. As result, the optical axis of the master can be placed in vertical position avoiding undesired movements of the master and making the sub-aperture stitching easier. We describe the proposed design and the results obtained with this device.

  3. Competing descriptions of diffusion profiles with two features: Surface space-charge layer versus fast grain-boundary diffusion

    NASA Astrophysics Data System (ADS)

    Schraknepper, H.; De Souza, R. A.

    2016-02-01

    Two different physical processes, (i) fast grain-boundary diffusion (FGBD) of oxygen and (ii) hindered oxygen diffusion in a surface space-charge layer, yield oxygen isotope diffusion profiles in a similar form. Two features are observed, with the short, sharp profile close to the surface being followed by a longer, shallower profile. In this study, we develop a procedure for deciding which of the two descriptions applies to experimentally measured profiles. Specifically, we solve Fick's second law, using finite-element simulations, to obtain oxygen isotope diffusion profiles for the two cases. Each set of profiles is then analysed in terms of the competing description. In this manner, we derive falsifiable conditions that allow physical processes to be assigned unambiguously to the two features of such isotope profiles. Applying these conditions to experimental profiles for SrTiO3 single crystals published in the literature, we find that FGBD is an invalid model for describing the diffusion processes.

  4. Fast E-field switching of a pulsed surface muon beam: The commissioning of the European muon facility at ISIS

    NASA Astrophysics Data System (ADS)

    Eaton, G. H.; Clarke-Gayther, M. A.; Scott, C. A.; Uden, C. N.; Williams, W. G.

    1994-03-01

    The ISIS pulsed muon facility at RAL has been upgraded by the inclusion of a fast E-field kicker which simultaneously divides and distributes the muon pulses at surface momentum to the three experimental areas at a repetition rate of 50 Hz. This upgraded facility has been successfully commissioned in conjunction with a new μSR spectrometer. It has been shown that this new spectrometer can operate as expected with a figure of merit for μSR experiments similar to that of the original spectrometer, in spite of receiving only half of the relative muon intensity. This twofold increase in experimental capability will be further increased in the near future by the incorporation of experimental equipment in the third beamline. Such a facility will be capable of satisfying a European wide demand for μSR research with pulsed surface muons.

  5. Study of wave-particle interaction between fast Magnetosonic and energetic electrons based on numerical simulation

    NASA Astrophysics Data System (ADS)

    Fu, S.

    2015-12-01

    There are many energetic electrons in the radiation belt of Earth. When the geomagnetic activity becomes stronger, the energy flux of energetic electrons will increase to more than ten times in the outer radiation belt, therefore it is very important to study how the energetic electrons generate and the lifetime of energetic electrons for space weather research. The acceleration of electrons in radiation belt is mainly depending on wave-particle interaction: the whistler mode chorus is the main driver for local acceleration mechanism, which could accelerate and loss energetic electrons; the geomagnetic pulsation ULF wave will cause energetic electron inward radial diffusion which will charge the electrons; recently observation results show us that the fast magnetosonic waves may also accelerate energetic electrons. For the reason that we try to study the wave-particle interaction between fast Magnetosonic and energetic electrons based on numerical simulation, in which the most important past is at the storm time the combination of highly warped Earth magnetic field and fast magnetosonic wave field will be applied for the electromagnetic environment of moving test particles. The energy, pitch angle and cross diffusion coefficients will be calculated respectively in this simulation to study how the electrons receive energy from fast magnetosonic wave. The diffusion coefficients within different dipole Earth magnetic field and non-dipole storm magnetic field are compared, while dynamics of electrons at selected initial energys are shown in our study.

  6. Assessing cognitive processes with diffusion model analyses: a tutorial based on fast-dm-30

    PubMed Central

    Voss, Andreas; Voss, Jochen; Lerche, Veronika

    2015-01-01

    Diffusion models can be used to infer cognitive processes involved in fast binary decision tasks. The model assumes that information is accumulated continuously until one of two thresholds is hit. In the analysis, response time distributions from numerous trials of the decision task are used to estimate a set of parameters mapping distinct cognitive processes. In recent years, diffusion model analyses have become more and more popular in different fields of psychology. This increased popularity is based on the recent development of several software solutions for the parameter estimation. Although these programs make the application of the model relatively easy, there is a shortage of knowledge about different steps of a state-of-the-art diffusion model study. In this paper, we give a concise tutorial on diffusion modeling, and we present fast-dm-30, a thoroughly revised and extended version of the fast-dm software (Voss and Voss, 2007) for diffusion model data analysis. The most important improvement of the fast-dm version is the possibility to choose between different optimization criteria (i.e., Maximum Likelihood, Chi-Square, and Kolmogorov-Smirnov), which differ in applicability for different data sets. PMID:25870575

  7. Arikan and Alamouti matrices based on fast block-wise inverse Jacket transform

    NASA Astrophysics Data System (ADS)

    Lee, Moon Ho; Khan, Md Hashem Ali; Kim, Kyeong Jin

    2013-12-01

    Recently, Lee and Hou (IEEE Signal Process Lett 13: 461-464, 2006) proposed one-dimensional and two-dimensional fast algorithms for block-wise inverse Jacket transforms (BIJTs). Their BIJTs are not real inverse Jacket transforms from mathematical point of view because their inverses do not satisfy the usual condition, i.e., the multiplication of a matrix with its inverse matrix is not equal to the identity matrix. Therefore, we mathematically propose a fast block-wise inverse Jacket transform of orders N = 2 k , 3 k , 5 k , and 6 k , where k is a positive integer. Based on the Kronecker product of the successive lower order Jacket matrices and the basis matrix, the fast algorithms for realizing these transforms are obtained. Due to the simple inverse and fast algorithms of Arikan polar binary and Alamouti multiple-input multiple-output (MIMO) non-binary matrices, which are obtained from BIJTs, they can be applied in areas such as 3GPP physical layer for ultra mobile broadband permutation matrices design, first-order q-ary Reed-Muller code design, diagonal channel design, diagonal subchannel decompose for interference alignment, and 4G MIMO long-term evolution Alamouti precoding design.

  8. Polylactide-based polyurethane shape memory nanocomposites (Fe3O4/PLAUs) with fast magnetic responsiveness

    NASA Astrophysics Data System (ADS)

    Gu, Shu-Ying; Jin, Sheng-Peng; Gao, Xie-Feng; Mu, Jian

    2016-05-01

    Polylactide-based polyurethane shape memory nanocomposites (Fe3O4/PLAUs) with fast magnetic responsiveness are presented. For the purpose of fast response and homogeneous dispersion of magnetic nanoparticles, oleic acid was used to improve the dispersibility of Fe3O4 nanoparticles in a polymer matrix. A homogeneous distribution of Fe3O4 nanoparticles in the polymer matrix was obtained for nanocomposites with low Fe3O4 loading content. A small agglomeration was observed for nanocomposites with 6 wt% and 9 wt% loading content, leading to a small decline in the mechanical properties. PLAU and its nanocomposites have glass transition around 52 °C, which can be used as the triggering temperature. PLAU and its nanocomposites have shape fixity ratios above 99%, shape recovery ratios above 82% for the first cycle and shape recovery ratios above 91% for the second cycle. PLAU and its nanocomposites also exhibit a fast water bath or magnetic responsiveness. The magnetic recovery time decreases with an increase in the loading content of Fe3O4 nanoparticles due to an improvement in heating performance for increased weight percentage of fillers. The nanocomposites have fast responses in an alternating magnetic field and have potential application in biomedical areas such as intravascular stent.

  9. Fast Traffic Sign Recognition with a Rotation Invariant Binary Pattern Based Feature

    PubMed Central

    Yin, Shouyi; Ouyang, Peng; Liu, Leibo; Guo, Yike; Wei, Shaojun

    2015-01-01

    Robust and fast traffic sign recognition is very important but difficult for safe driving assistance systems. This study addresses fast and robust traffic sign recognition to enhance driving safety. The proposed method includes three stages. First, a typical Hough transformation is adopted to implement coarse-grained location of the candidate regions of traffic signs. Second, a RIBP (Rotation Invariant Binary Pattern) based feature in the affine and Gaussian space is proposed to reduce the time of traffic sign detection and achieve robust traffic sign detection in terms of scale, rotation, and illumination. Third, the techniques of ANN (Artificial Neutral Network) based feature dimension reduction and classification are designed to reduce the traffic sign recognition time. Compared with the current work, the experimental results in the public datasets show that this work achieves robustness in traffic sign recognition with comparable recognition accuracy and faster processing speed, including training speed and recognition speed. PMID:25608217

  10. FPS-RAM: Fast Prefix Search RAM-Based Hardware for Forwarding Engine

    NASA Astrophysics Data System (ADS)

    Zaitsu, Kazuya; Yamamoto, Koji; Kuroda, Yasuto; Inoue, Kazunari; Ata, Shingo; Oka, Ikuo

    Ternary content addressable memory (TCAM) is becoming very popular for designing high-throughput forwarding engines on routers. However, TCAM has potential problems in terms of hardware and power costs, which limits its ability to deploy large amounts of capacity in IP routers. In this paper, we propose new hardware architecture for fast forwarding engines, called fast prefix search RAM-based hardware (FPS-RAM). We designed FPS-RAM hardware with the intent of maintaining the same search performance and physical user interface as TCAM because our objective is to replace the TCAM in the market. Our RAM-based hardware architecture is completely different from that of TCAM and has dramatically reduced the costs and power consumption to 62% and 52%, respectively. We implemented FPS-RAM on an FPGA to examine its lookup operation.

  11. Fast-neutron imaging spectrometer based on liquid scintillator loaded capillaries

    NASA Astrophysics Data System (ADS)

    Mor, I.; Vartsky, D.; Brandis, M.; Goldberg, M. B.; Bar, D.; Mardor, I.; Dangendorf, V.; Bromberger, B.

    2012-04-01

    A fast-neutron imaging detector based on micrometric glass capillaries loaded with high refractive index liquid scintillator has been developed Neutron energy spectrometry is based on event-by-event detection and reconstruction of neutron energy from the measurement of the knock-on proton track length and the amount of light produced in the track. In addition, the detector can provide fast-neutron imaging with position resolution of tens of microns. The detector principle of operation, simulations and experimental results obtained with a small detector prototype are described. We have demonstrated by simulation energy spectrum reconstruction for incident neutrons in the range of 4-20 MeV. The energy resolution in this energy range was 10-15%. Preliminary experimental results of detector spectroscopic capabilities are presented

  12. Fast mode decision for multiview video coding based on depth maps

    NASA Astrophysics Data System (ADS)

    Cernigliaro, Gianluca; Jaureguizar, Fernando; Ortega, Antonio; Cabrera, Julián; García, Narciso

    2009-01-01

    A new fast mode decision (FMD) algorithm for multi-view video coding (MVC) is presented. One of the multiple views is encoded based on traditional methods, which provides a mode decision (MD) map, while encoding of the other views is based on the analysis of the homogeneity of the depth map. This approach reduces the burden of the rate-distortion (RD) motion analysis based on the availability of a depth map, which is assumed to be provided by the acquisition process. Although there is a slight decrease of performance in rate-distortion terms, there is a significant reduction in computational cost.

  13. Simple, fast and accurate eight points amplitude estimation method of sinusoidal signals for DSP based instrumentation

    NASA Astrophysics Data System (ADS)

    Vizireanu, D. N.; Halunga, S. V.

    2012-04-01

    A simple, fast and accurate amplitude estimation algorithm of sinusoidal signals for DSP based instrumentation is proposed. It is shown that eight samples, used in two steps, are sufficient. A practical analytical formula for amplitude estimation is obtained. Numerical results are presented. Simulations have been performed when the sampled signal is affected by white Gaussian noise and when the samples are quantized on a given number of bits.

  14. Fast object tracking based on template matching and region information fusion extraction

    NASA Astrophysics Data System (ADS)

    Liu, Liman; Chen, Yun; Liu, Haihua

    2015-12-01

    In this paper, a fast object tracking algorithm based on template matching and region information fusion extraction is proposed. In the prediction framework, the data connection task is achieved by object template and object information extraction. And then the object is tracked accurately by using the object motion information. We handle the tracking shift by using the confidence estimation strategy. The experiments show that the proposed algorithm has robust performance.

  15. New Fast Shower Max Detector Based on MCP as an Active Element

    NASA Astrophysics Data System (ADS)

    Ronzhin, A.; Los, S.; Ramberg, E.; Spiropulu, M.; Apresyan, A.; Xie, S.; Kim, H.; Zatserklyaniy, A.

    2015-02-01

    One possibility to make a fast and radiation resistant shower maximum (SM) detector is to use a secondary emitter as an active element. We present below test beam results, obtained with different types of photo detectors based on micro channel plates (MCP) as secondary emitter. The SM time resolution - we obtained for this new type of detector is at the level of 20-30 ps. We estimate that a significant contribution to the detector response originates from secondary emission of the MCP.

  16. A FastA based compilation of higher plant mitochondrial tRNA genes.

    PubMed Central

    Sagliano, A; Volpicella, M; Gallerani, R; Ceci, L R

    1998-01-01

    A new version of the compilation of higher plant mitochondrial tRNA genes (http://www.ebi.ac.uk/service ) has been obtained by means of the FastA program for similarity searching in nucleotide sequence Databases. This approach improves the previous collection, which was based on literature data analysis. The current compilation contains 158 sequences with an increase of 43 units. In this paper, some interesting features of the new entries are briefly presented. PMID:9399821

  17. Fast robust non-sequential optical ray-tracing with implicit algebraic surfaces

    NASA Astrophysics Data System (ADS)

    Greynolds, Alan W.

    2015-09-01

    The fastest, most robust, general technique for non-sequentially ray-tracing a large class of imaging and non-imaging optical systems is by geometric modeling with algebraic (i.e. polynomial) implicit surfaces. The basic theory of these surfaces with special attention to optimizing their precise intersection with a ray (even at grazing incidence) is outlined for an admittedly limited software implementation. On a couple of "tame" examples, a 64-bit Windows 7 version is significantly faster than the fastest commercial design software (all multi-threaded). Non-sequential ray-surface interactions approaching 30M/sec are achieved on a 12-core 2.67 GHz Mac Pro desktop computer. For a more exotic example of a 6th degree Wood's horn beam dump (light trap), a 32-bit Windows single thread version traces rays nearly 4 times faster than the commercial ASAP software's implicit algebraic surface and over 13 times faster than its equivalent NURBS surface. However, implicit surfaces are foreign to most CAD systems and thus unfortunately, don't easily fit into a modern workflow.

  18. MetaSensing's FastGBSAR: ground based radar for deformation monitoring

    NASA Astrophysics Data System (ADS)

    Rödelsperger, Sabine; Meta, Adriano

    2014-10-01

    The continuous monitoring of ground deformation and structural movement has become an important task in engineering. MetaSensing introduces a novel sensor system, the Fast Ground Based Synthetic Aperture Radar (FastGBSAR), based on innovative technologies that have already been successfully applied to airborne SAR applications. The FastGBSAR allows the remote sensing of deformations of a slope or infrastructure from up to a distance of 4 km. The FastGBSAR can be setup in two different configurations: in Real Aperture Radar (RAR) mode it is capable of accurately measuring displacements along a linear range profile, ideal for monitoring vibrations of structures like bridges and towers (displacement accuracy up to 0.01 mm). Modal parameters can be determined within half an hour. Alternatively, in Synthetic Aperture Radar (SAR) configuration it produces two-dimensional displacement images with an acquisition time of less than 5 seconds, ideal for monitoring areal structures like dams, landslides and open pit mines (displacement accuracy up to 0.1 mm). The MetaSensing FastGBSAR is the first ground based SAR instrument on the market able to produce two-dimensional deformation maps with this high acquisition rate. By that, deformation time series with a high temporal and spatial resolution can be generated, giving detailed information useful to determine the deformation mechanisms involved and eventually to predict an incoming failure. The system is fully portable and can be quickly installed on bedrock or a basement. The data acquisition and processing can be fully automated leading to a low effort in instrument operation and maintenance. Due to the short acquisition time of FastGBSAR, the coherence between two acquisitions is very high and the phase unwrapping is simplified enormously. This yields a high density of resolution cells with good quality and high reliability of the acquired deformations. The deformation maps can directly be used as input into an Early

  19. HIGH RESOLUTION AND FAST SCANNING SQUID BASED NON-DESTRUCTIVE INSPECTION SYSTEM OF NIOBIUM SHEETS FOR SRF CAVITIES

    SciTech Connect

    SHU, QUAN-SHENG

    2008-06-08

    Applications in high energy physics accelerators and other fields require the use of thousands of superconducting RF (SRF) cavities that are made of high purity Nb material and the purity of niobium is critical for these cavities to reach the highest accelerating fields. Tantalum is the most prolific of metal inclusions, which can cause thermal breakdown and prevent the cavities from reaching their theoretical performance limits of 45-50 MV/m, and DOE Labs are searching for a technology that could detect small impurities in superconducting Nb sheets reaching the highest possible accelerating fields. The proposed innovative SQUID-based Nondestructive system can scan Niobium sheets used in the manufacturing of SRF cavities with both high speed and high resolution. A highly sensitive SQUID system with a gradiometer probe, non-magnetic dewar, data acquisition system, and a scanning system will be developed for fast detection of impurities in planar Nb sheets. In phase I, we will modify our existing SQUID-based eddy current system to detect 100 micron size Ta defects and a great effort will focus on achieving fast scanning of a large number of niobium sheets in a shorter time and with reasonable resolution. An older system operated by moving the sample 1 mm, stopping and waiting for 1-2 seconds, then activating a measurement by the SQUID after the short settle time is modified. A preliminary designed and implemented a SQUID scanning system that is fast and is capable of scanning a 30 cm x 30 cm Nb sheet in 15 minutes by continuously moving the table at speeds up to 10 mm/s while activating the SQUID at 1mm interval is modified and reached the Phase I goal of 100mm resolution. We have successfully demonstrated the feasibility that a fast speed SQUID scanner without sacrificing the resolution of detection can be done, and a data acquisition and analysis system is also preliminary developed. The SQUID based scanner will help reach the highest accelerating field in SRF

  20. Fast calculation of bokeh image structure in camera lenses with multiple aspheric surfaces

    NASA Astrophysics Data System (ADS)

    Sivokon, V. P.; Thorpe, M. D.

    2014-12-01

    Three different approaches to calculation of internal structure of bokeh image in camera lenses with two aspheric surfaces are analyzed and compared - the transfer function approach, the beam propagation approach and direct raytracing in an optical design software. The transfer function approach is the fastest and provides accurate results when peak-to-valley of mid-spatial frequency phase modulation induced at the lens exit pupil is below λ/10. Aspheric surfaces are shown to contribute to the bokeh structure differently increasing the complexity of bokeh image especially for offaxis bokeh.

  1. Reduced-Enrichment, Fast-Spectrum Lunar/Mars Surface Reactors

    SciTech Connect

    Poston, David I.; Marcille, Thomas F.; Kapernick, Richard J.; Sadasivan, Pratap; Amiri, Benjamin W.

    2006-07-01

    This report investigates the potential for reduced-enrichment, un-moderated surface reactors. The potential programmatic advantages of a reduced safeguards classification are discussed, along with design options that could allow a Cat III inventory surface reactor. Two potential reactor Cat III designs are presented, each with a thermal power of 100 kWt and a 5 year life: one is fueled with SS/UO{sub 2} fuel pins and the other with SS/UN fuel pins. The mass and performance parameters of these designs are compared to each other, and to a Cat III UZrH-fueled, moderated-spectrum design. (authors)

  2. Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions.

    PubMed

    Philippe, H; Lopez, P; Brinkmann, H; Budin, K; Germot, A; Laurent, J; Moreira, D; Müller, M; Le Guyader, H

    2000-06-22

    The current paradigm of eukaryotic evolution is based primarily on comparative analysis of ribosomal RNA sequences. It shows several early-emerging lineages, mostly amitochondriate, which might be living relics of a progressive assembly of the eukaryotic cell. However, the analysis of slow-evolving positions, carried out with the newly developed slow-fast method, reveals that these lineages are, in terms of nucleotide substitution, fast-evolving ones, misplaced at the base of the tree by a long branch attraction artefact. Since the fast-evolving groups are not always the same, depending on which macromolecule is used as a marker, this explains most of the observed incongruent phylogenies. The current paradigm of eukaryotic evolution thus has to be seriously re-examined as the eukaryotic phylogeny is presently best summarized by a multifurcation. This is consistent with the Big Bang hypothesis that all extant eukaryotic lineages are the result of multiple cladogeneses within a relatively brief period, although insufficiency of data is also a possible explanation for the lack of resolution. For further resolution, rare evolutionary events such as shared insertions and/or deletions or gene fusions might be helpful. PMID:10902687

  3. Fast entropy-based CABAC rate estimation for mode decision in HEVC.

    PubMed

    Chen, Wei-Gang; Wang, Xun

    2016-01-01

    High efficiency video coding (HEVC) seeks the best code tree configuration, the best prediction unit division and the prediction mode, by evaluating the rate-distortion functional in a recursive way and using a "try all and select the best" strategy. Further, HEVC only supports context adaptive binary arithmetic coding (CABAC), which has the disadvantage of being highly sequential and having strong data dependencies, as the entropy coder. So, the development of a fast rate estimation algorithm for CABAC-based coding has a great practical significance for mode decision in HEVC. There are three elementary steps in CABAC encoding process: binarization, context modeling, and binary arithmetic coding. Typical approaches to fast CABAC rate estimation simplify or eliminate the last two steps, but leave the binarization step unchanged. To maximize the reduction of computational complexity, we propose a fast entropy-based CABAC rate estimator in this paper. It eliminates not only the modeling and the coding steps, but also the binarization step. Experimental results demonstrate that the proposed estimator is able to reduce the computational complexity of the mode decision in HEVC by 9-23 % with negligible PSNR loss and BD-rate increment, and therefore exhibits applicability to practical HEVC encoder implementation. PMID:27386240

  4. A fast preamplifier concept for SiPM-based time-of-flight PET detectors

    NASA Astrophysics Data System (ADS)

    Huizenga, J.; Seifert, S.; Schreuder, F.; van Dam, H. T.; Dendooven, P.; Löhner, H.; Vinke, R.; Schaart, D. R.

    2012-12-01

    Silicon photomultipliers (SiPMs) offer high gain and fast response to light, making them interesting for fast timing applications such as time-of-flight (TOF) PET. To fully exploit the potential of these photosensors, dedicated preamplifiers that do not deteriorate the rise time and signal-to-noise ratio are crucial. Challenges include the high sensor capacitance, typically >300 pF for a 3 mm×3 mm SiPM sensor, as well as oscillation issues. Here we present a preamplifier concept based on low noise, high speed transistors, designed for optimum timing performance. The input stage consists of a transimpedance common-base amplifier with a very low input impedance even at high frequencies, which assures a good linearity and avoids that the high detector capacitance affects the amplifier bandwidth. The amplifier has a fast timing output as well as a 'slow' energy output optimized for determining the total charge content of the pulse. The rise time of the amplifier is about 300 ps. The measured coincidence resolving time (CRT) for 511 keV photon pairs using the amplifiers in combination with 3 mm×3 mm SiPMs (Hamamatsu MPPC-S10362-33-050C) coupled to 3 mm×3 mm×5 mm LaBr3:Ce and LYSO:Ce crystals equals 95 ps FWHM and 138 ps FWHM, respectively.

  5. A fast multispectral light synthesiser based on LEDs and a diffraction grating

    PubMed Central

    Belušič, Gregor; Ilić, Marko; Meglič, Andrej; Pirih, Primož

    2016-01-01

    Optical experiments often require fast-switching light sources with adjustable bandwidths and intensities. We constructed a wavelength combiner based on a reflective planar diffraction grating and light emitting diodes with emission peaks from 350 to 630 nm that were positioned at the angles corresponding to the first diffraction order of the reversed beam. The combined output beam was launched into a fibre. The spacing between 22 equally wide spectral bands was about 15 nm. The time resolution of the pulse-width modulation drivers was 1 ms. The source was validated with a fast intracellular measurement of the spectral sensitivity of blowfly photoreceptors. In hyperspectral imaging of Xenopus skin circulation, the wavelength resolution was adequate to resolve haemoglobin absorption spectra. The device contains no moving parts, has low stray light and is intrinsically capable of multi-band output. Possible applications include visual physiology, biomedical optics, microscopy and spectroscopy. PMID:27558155

  6. A fast quaternion-based orientation optimizer via virtual rotation for human motion tracking.

    PubMed

    Lee, Jung Keun; Park, Edward J

    2009-05-01

    For real-time ambulatory human motion tracking with low-cost inertial/magnetic sensors, a computationally efficient and robust algorithm for estimating orientation is critical. This paper presents a quaternion-based orientation optimizer for tracking human body motion, using triaxis rate gyro, accelerometer, and magnetometer signals. The proposed optimizer uses a Gauss-Newton (G-N) method for finding the best-fit quaternion. In order to decrease the computing time, the optimizer is formulated using a virtual rotation concept that allows very fast quaternion updates compared to the conventional G-N method. In addition, to guard against the effects of fast body motions and temporary ferromagnetic disturbances, a situational measurement vector selection procedure is adopted in conjunction with the G-N optimizer. The accuracy of orientation estimates is validated experimentally, using arm motion trials. PMID:19473934

  7. Development of fast neutron radiography system based on portable neutron generator

    NASA Astrophysics Data System (ADS)

    Yi, Chia Jia; Nilsuwankosit, Sunchai

    2016-01-01

    Due to the high installation cost, the safety concern and the immobility of the research reactors, the neutron radiography system based on portable neutron generator is proposed. Since the neutrons generated from a portable neutron generator are mostly the fast neutrons, the system is emphasized on using the fast neutrons for the purpose of conducting the radiography. In order to suppress the influence of X-ray produced by the neutron generator, a combination of a shielding material sandwiched between two identical imaging plates is used. A binary XOR operation is then applied for combining the information from the imaging plates. The raw images obtained confirm that the X-ray really has a large effect and that XOR operation can help enhance the effect of the neutrons.

  8. A cargo inspection system based on pulsed fast neutron analysis (PFNA).

    PubMed

    Ipe, N E; Olsher, R; Ryge, P; Mrozack, J; Thieu, J

    2005-01-01

    A cargo inspection system based on pulsed fast neutron analysis (PFNA) is to be used at a border crossing to detect explosives and contraband hidden in trucks and cargo containers. Neutrons are produced by the interaction of deuterons in a deuterium target mounted on a moveable scan arm. The collimated pulsed fast neutron beam is used to determine the location and composition of objects in a cargo container. The neutrons produce secondary gamma rays that are characteristic of the object's elemental composition. The cargo inspection system building consists of an accelerator room and an inspection tunnel. The accelerator room is shielded and houses the injector, accelerator and the neutron production gas target. The inspection tunnel is partially shielded. The truck or container to be inspected will be moved through the inspection tunnel by a conveyor system. The facility and radiation source terms considered in the shielding design are described. PMID:16604657

  9. A fast multispectral light synthesiser based on LEDs and a diffraction grating.

    PubMed

    Belušič, Gregor; Ilić, Marko; Meglič, Andrej; Pirih, Primož

    2016-01-01

    Optical experiments often require fast-switching light sources with adjustable bandwidths and intensities. We constructed a wavelength combiner based on a reflective planar diffraction grating and light emitting diodes with emission peaks from 350 to 630 nm that were positioned at the angles corresponding to the first diffraction order of the reversed beam. The combined output beam was launched into a fibre. The spacing between 22 equally wide spectral bands was about 15 nm. The time resolution of the pulse-width modulation drivers was 1 ms. The source was validated with a fast intracellular measurement of the spectral sensitivity of blowfly photoreceptors. In hyperspectral imaging of Xenopus skin circulation, the wavelength resolution was adequate to resolve haemoglobin absorption spectra. The device contains no moving parts, has low stray light and is intrinsically capable of multi-band output. Possible applications include visual physiology, biomedical optics, microscopy and spectroscopy. PMID:27558155

  10. Dynamical programming based turbulence velocimetry for fast visible imaging of tokamak plasma.

    PubMed

    Banerjee, Santanu; Zushi, H; Nishino, N; Mishra, K; Onchi, T; Kuzmin, A; Nagashima, Y; Hanada, K; Nakamura, K; Idei, H; Hasegawa, M; Fujisawa, A

    2015-03-01

    An orthogonal dynamic programming (ODP) based particle image velocimetry (PIV) technique is developed to measure the time resolved flow field of the fluctuating structures at the plasma edge and scrape off layer (SOL) of tokamaks. This non-intrusive technique can provide two dimensional velocity fields at high spatial and temporal resolution from a fast framing image sequence and hence can provide better insights into plasma flow as compared to conventional probe measurements. Applicability of the technique is tested with simulated image pairs. Finally, it is applied to tangential fast visible images of QUEST plasma to estimate the SOL flow in inboard poloidal null-natural divertor configuration. This technique is also applied to investigate the intricate features of the core of the run-away dominated phase following the injection of a large amount of neutrals in the target Ohmic plasma. Development of the ODP-PIV code and its applicability on actual plasma images is reported. PMID:25832227

  11. A Fast and Robust Ellipse-Detection Method Based on Sorted Merging

    PubMed Central

    Ren, Guanghui; Zhao, Yaqin; Jiang, Lihui

    2014-01-01

    A fast and robust ellipse-detection method based on sorted merging is proposed in this paper. This method first represents the edge bitmap approximately with a set of line segments and then gradually merges the line segments into elliptical arcs and ellipses. To achieve high accuracy, a sorted merging strategy is proposed: the merging degrees of line segments/elliptical arcs are estimated, and line segments/elliptical arcs are merged in descending order of the merging degrees, which significantly improves the merging accuracy. During the merging process, multiple properties of ellipses are utilized to filter line segment/elliptical arc pairs, making the method very efficient. In addition, an ellipse-fitting method is proposed that restricts the maximum ratio of the semimajor axis and the semiminor axis, further improving the merging accuracy. Experimental results indicate that the proposed method is robust to outliers, noise, and partial occlusion and is fast enough for real-time applications. PMID:24782661

  12. Dynamical programming based turbulence velocimetry for fast visible imaging of tokamak plasma

    NASA Astrophysics Data System (ADS)

    Banerjee, Santanu; Zushi, H.; Nishino, N.; Mishra, K.; Onchi, T.; Kuzmin, A.; Nagashima, Y.; Hanada, K.; Nakamura, K.; Idei, H.; Hasegawa, M.; Fujisawa, A.

    2015-03-01

    An orthogonal dynamic programming (ODP) based particle image velocimetry (PIV) technique is developed to measure the time resolved flow field of the fluctuating structures at the plasma edge and scrape off layer (SOL) of tokamaks. This non-intrusive technique can provide two dimensional velocity fields at high spatial and temporal resolution from a fast framing image sequence and hence can provide better insights into plasma flow as compared to conventional probe measurements. Applicability of the technique is tested with simulated image pairs. Finally, it is applied to tangential fast visible images of QUEST plasma to estimate the SOL flow in inboard poloidal null-natural divertor configuration. This technique is also applied to investigate the intricate features of the core of the run-away dominated phase following the injection of a large amount of neutrals in the target Ohmic plasma. Development of the ODP-PIV code and its applicability on actual plasma images is reported.

  13. Improving abdomen tumor low-dose CT images using a fast dictionary learning based processing

    NASA Astrophysics Data System (ADS)

    Chen, Yang; Yin, Xindao; Shi, Luyao; Shu, Huazhong; Luo, Limin; Coatrieux, Jean-Louis; Toumoulin, Christine

    2013-08-01

    In abdomen computed tomography (CT), repeated radiation exposures are often inevitable for cancer patients who receive surgery or radiotherapy guided by CT images. Low-dose scans should thus be considered in order to avoid the harm of accumulative x-ray radiation. This work is aimed at improving abdomen tumor CT images from low-dose scans by using a fast dictionary learning (DL) based processing. Stemming from sparse representation theory, the proposed patch-based DL approach allows effective suppression of both mottled noise and streak artifacts. The experiments carried out on clinical data show that the proposed method brings encouraging improvements in abdomen low-dose CT images with tumors.

  14. Variable disparity-motion estimation based fast three-view video coding

    NASA Astrophysics Data System (ADS)

    Bae, Kyung-Hoon; Kim, Seung-Cheol; Hwang, Yong Seok; Kim, Eun-Soo

    2009-02-01

    In this paper, variable disparity-motion estimation (VDME) based 3-view video coding is proposed. In the encoding, key-frame coding (KFC) based motion estimation and variable disparity estimation (VDE) for effectively fast three-view video encoding are processed. These proposed algorithms enhance the performance of 3-D video encoding/decoding system in terms of accuracy of disparity estimation and computational overhead. From some experiments, stereo sequences of 'Pot Plant' and 'IVO', it is shown that the proposed algorithm's PSNRs is 37.66 and 40.55 dB, and the processing time is 0.139 and 0.124 sec/frame, respectively.

  15. Computer simulation of fast crack propagation and arrest in steel plate with temperature gradient based on local fracture stress criterion

    SciTech Connect

    Machida, Susumu; Yoshinari, Hitoshi; Aihara, Shuji

    1997-12-31

    A fracture mechanics model for fast crack propagation and arrest is proposed based on the local fracture stress criterion. Dynamic fracture toughness (K{sub D}) for a propagating crack is calculated as a function of crack velocity and temperature. The model is extended to incorporate the effect of unbroken ligament (UL) formed near the plate surfaces and crack-front-tunneling. The model simulates acceleration, deceleration and arrest of a crack in a ESSO or a double-tension test plate with temperature-gradient. Calculated arrested crack lengths compare well with experimental results. It is shown that the conventional crack arrest toughness calculated from applied stress and arrested crack length depends on temperature-gradient and the toughness is not a unique material property.

  16. FAST TRACK COMMUNICATION Spectral signatures of the surface reconstructions of Au(110)/electrolyte interfaces

    NASA Astrophysics Data System (ADS)

    Smith, C. I.; Bowfield, A.; Almond, N. J.; Mansley, C. P.; Convery, J. H.; Weightman, P.

    2010-10-01

    It is demonstrated that the (1 × 1) structure and the (1 × 2) and (1 × 3) surface reconstructions that occur at Au(110)/electrolyte interfaces have unique optical fingerprints. The optical fingerprints are potential, pH and anion dependent and have potential for use in monitoring dynamic changes at this interface. We also observe a specific reflection anisotropy spectroscopy signature that may arise from anions adsorbed on the (1 × 1) structure of Au(110).

  17. 3D shape measurements of fast moving rough surfaces by two tilted interference fringe systems

    NASA Astrophysics Data System (ADS)

    Kuschmierz, Robert; Günther, Philipp; Czarske, Jürgen W.

    2013-04-01

    Shape measurement of moving, especially rotating objects is an important task in the field of process control. The Laser Doppler Distance Sensor was invented for this purpose. It is realized by two tilted interference fringe systems and enables the simultaneous measurement of the surface velocity and profile. The distance is coded in the phase difference between the generated interference signals of two photo detectors. In order to achieve a distance uncertainty of below 1μm a steep calibration function is necessary. This can be achieved by increasing the tilting angle. However, due to the speckle effect at rough surfaces, random envelopes and phase jumps occur disturbing the phase difference estimation with increasing tilting angle. This problem was overcome recently by employing a receiving optics matching reducing the distance uncertainty by about one magnitude. By evaluating the Doppler frequencies of the two fringe systems the surface velocity and thereby the objects mean diameter can be calculated as well as angular misalignment of the sensor can be detected.

  18. Nonlinear fast growth of surface gravity waves under the action of wind

    NASA Astrophysics Data System (ADS)

    Brunetti, Maura; Marchiando, Nadège; Berti, Nicolas; Kasparian, Jérôme

    2014-05-01

    The generation of ocean waves by wind is a highly nonlinear problem where the physical processes at the air-water interface are difficult to measure and to model for the presence of turbulence in both fluids. Direct field measurements of the induced pressure by airflow on waves are rare and difficult to perform, thus the underlying mechanisms leading to wave amplification are still unclear. We consider here the Miles' mechanism, which is characterised by growth rates, ΓM/f, in the range from 10-3-10-2 for fast-moving waves and in the range 10-2-1 for slow-moving waves and waves in laboratory tank experiments. This prompted us to investigate the case with Miles' growth rates of first order in the wave steepness, ΓM/f = O(ɛ), instead of the usually considered one, ΓM/f = O(ɛ2), where ɛ is the wave steepness which both in ocean and tank experiments can be of the order of 0.1. We use the method of multiple scales for deriving the nonlinear Schrödinger (NLS) equation with wave growth rate of first order in the wave steepness. We find that a simple coordinate transformation reduces the wind-forced NLS equation into the standard NLS equation with constant coefficients. Thus, we show how the Peregrine, Akhmediev and Kuznetsov-Ma solutions are modified in the presence of this first-order wind. In particular, the lifetime of both the Peregrine and the Akhmediev solitons increases for large growth rates and the maximum amplitude of these solitons slightly increases for growth rates larger than a certain value. The enhancement of both lifetime and maximum amplitude of rogue waves under the action of wind has been observed in tank experiments and numerical simulations of dispersive focusing, thus confirming the relevance in this context of the case ΓM/f = O(ɛ) considered in the present study.

  19. Accelerator-based neutron source for the neutron-capture and fast neutron therapy at hospital

    NASA Astrophysics Data System (ADS)

    Bayanov, B. F.; Belov, V. P.; Bender, E. D.; Bokhovko, M. V.; Dimov, G. I.; Kononov, V. N.; Kononov, O. E.; Kuksanov, N. K.; Palchikov, V. E.; Pivovarov, V. A.; Salimov, R. A.; Silvestrov, G. I.; Skrinsky, A. N.; Soloviov, N. A.; Taskaev, S. Yu.

    The proton accelerator complex for neutron production in lithium target discussed, which can operate in two modes. The first provides a neutron beam kinematically collimated with good forward direction in 25° and average energy of 30 keV, directly applicable for neutron-capture therapy with high efficiency of proton beam use. The proton energy in this mode is 1.883-1.890 MeV that is near the threshold of the 7Li( p, n) 7Be reaction. In the second mode, at proton energy of 2.5 MeV, the complex-produced neutron beam with maximum energy board of 790 keV which can be used directly for fast neutron therapy and for neutron-capture therapy after moderation. The project of such a neutron source is based on the 2.5 MeV original electrostatic accelerator tandem with vacuum insulation developed at BINP which is supplied with a high-voltage rectifier. The rectifier is produced in BINP as a part of ELV-type industrial accelerator. Design features of the tandem determining its high reliability in operation with a high-current (up to 40 mA) H - ion beam are discussed. They are: the absence of ceramic accelerator columns around the beam passage region, good conditions for pumping out of charge-exchange gaseous target region, strong focusing optics and high acceleration rate minimizing the space charge effects. The possibility of stabilization of protons energy with an accuracy level of 0.1% necessary for operation in the near threshold region is considered. The design description of H - continuous ion source with a current of 40 mA is also performed. To operate with a 100 kW proton beam it is proposed to use liquid-lithium targets. A thin lithium layer on the surface of a tungsten disk cooled intensively by a liquid metal heat carrier is proposed for use in case of the vertical beam, and a flat liquid lithium jet flowing through the narrow nozzle - for the horizontal beam.

  20. GLDAS Land Surface Models based Aridity Indices

    NASA Astrophysics Data System (ADS)

    Pande, S.; Ghazanfari, S.

    2011-12-01

    Identification of dryland areas is crucial to guide policy aimed at intervening in water stressed areas and addressing its perennial livelihood or food insecurity. Aridity indices based on spatially relative soil moisture conditions such as NCEP aridity index allow cross comparison of dry conditions between sites. NCEP aridity index is based on the ratio of annual precipitation (supply) to annual potential evaporation (demand). Such an index ignores subannual scale competition between evaporation and drainage functions well as rainfall and temperature regimes. This determines partitioning of annual supply of precipitation into two competing (but met) evaporation and runoff demands. We here introduce aridity indices based on these additional considerations by using soil moisture time series for the past 3 decades from three Land Surface Models (LSM) models and compare it with NCEP index. We analyze global monthly soil moisture time series (385 months) at 1 x 1 degree spatial resolution as modeled by three GLDAS LSMs - VIC, MOSAIC and NOAH. The first eigen vector from Empirical Orthogonal Function (EOF) analysis, as it is the most dominant spatial template of global soil moisture conditions, is extracted. Frequency of nonexceedences of this dominant soil moisture mode for a location by other locations is calculated and is used as our proposed aridity index. An area is indexed drier (relative to other areas in the world) if its frequency of nonexceedence is lower. The EOF analysis reveals that their first eigen vector explains approximately 32%, 43% and 47% of variance explained by first 385 eigen vectors for VIC, MOSAIC and NOAH respectively. The temporal coefficients associated with it for all three LSMS show seasonality with a jump in trend around the year 1999 for NOAH and MOSAIC. The VIC aridity index displays a pattern most closely resembling that of NCEP though all LSM based indices isolate dominant dryland areas. However, all three LSMs identify some parts of

  1. Accelerated materials design of fast oxygen ionic conductors based on first principles calculations

    NASA Astrophysics Data System (ADS)

    He, Xingfeng; Mo, Yifei

    Over the past decades, significant research efforts have been dedicated to seeking fast oxygen ion conductor materials, which have important technological applications in electrochemical devices such as solid oxide fuel cells, oxygen separation membranes, and sensors. Recently, Na0.5Bi0.5TiO3 (NBT) was reported as a new family of fast oxygen ionic conductor. We will present our first principles computation study aims to understand the O diffusion mechanisms in the NBT material and to design this material with enhanced oxygen ionic conductivity. Using the NBT materials as an example, we demonstrate the computation capability to evaluate the phase stability, chemical stability, and ionic diffusion of the ionic conductor materials. We reveal the effects of local atomistic configurations and dopants on oxygen diffusion and identify the intrinsic limiting factors in increasing the ionic conductivity of the NBT materials. Novel doping strategies were predicted and demonstrated by the first principles calculations. In particular, the K doped NBT compound achieved good phase stability and an order of magnitude increase in oxygen ionic conductivity of up to 0.1 S cm-1 at 900 K compared to the experimental Mg doped compositions. Our results provide new avenues for the future design of the NBT materials and demonstrate the accelerated design of new ionic conductor materials based on first principles techniques. This computation methodology and workflow can be applied to the materials design of any (e.g. Li +, Na +) fast ion-conducting materials.

  2. Fast ellipsometric measurements based on a single crystal photo-elastic modulator.

    PubMed

    Petkovšek, R; Petelin, Jaka; Možina, J; Bammer, F

    2010-09-27

    For quality control in high volume manufacturing of thin layers and for tracking of physical and chemical processes, ellipsometry is a common measurement technology. For such kinds of applications we present a novel approach of fast ellipsometric measurements. Instead of a conventional setup that uses a standard photo-elastic modulator, we use a 92 kHz Single Crystal Photo-Elastic Modulator (SCPEM), which is a LiTaO3 crystal with a size of 28 × 9 × 4 mm. This small, simple, and cost-effective solution also offers the advantage of direct control of the retardation via the current amplitude, which is important for repeatability of the measurements. Instead of a Lock-In Amplifier, an automated digital processing based on a fast analog to digital converter controlled by a highly flexible Field Programmable Gate Array is used. This and the extremely compact and efficient polarization modulation allow fast ellipsometric testing where the upper limit of measurement rates is mainly limited by the desired accuracy and repeatability of the measurements. The standard deviation that is related to the repeatability +/-0.002° for dielectric layers can be easily reached. PMID:20941038

  3. Fast similarity search for protein 3D structures using topological pattern matching based on spatial relations.

    PubMed

    Park, Sung-Hee; Ryu, Keun Ho; Gilbert, David

    2005-08-01

    Similarity search for protein 3D structures become complex and computationally expensive due to the fact that the size of protein structure databases continues to grow tremendously. Recently, fast structural similarity search systems have been required to put them into practical use in protein structure classification whilst existing comparison systems do not provide comparison results on time. Our approach uses multi-step processing that composes of a preprocessing step to represent geometry of protein structures with spatial objects, a filter step to generate a small candidate set using approximate topological string matching, and a refinement step to compute a structural alignment. This paper describes the preprocessing and filtering for fast similarity search using the discovery of topological patterns of secondary structure elements based on spatial relations. Our system is fully implemented by using Oracle 8i spatial. We have previously shown that our approach has the advantage of speed of performance compared with other approach such as DALI. This work shows that the discovery of topological relations of secondary structure elements in protein structures by using spatial relations of spatial databases is practical for fast structural similarity search for proteins. PMID:16187404

  4. A CFD-based wind solver for a fast response transport and dispersion model

    SciTech Connect

    Gowardhan, Akshay A; Brown, Michael J; Pardyjak, Eric R; Senocak, Inanc

    2010-01-01

    In many cities, ambient air quality is deteriorating leading to concerns about the health of city inhabitants. In urban areas with narrow streets surrounded by clusters of tall buildings, called street canyons, air pollution from traffic emissions and other sources is difficult to disperse and may accumulate resulting in high pollutant concentrations. For various situations, including the evacuation of populated areas in the event of an accidental or deliberate release of chemical, biological and radiological agents, it is important that models should be developed that produce urban flow fields quickly. For these reasons it has become important to predict the flow field in urban street canyons. Various computational techniques have been used to calculate these flow fields, but these techniques are often computationally intensive. Most fast response models currently in use are at a disadvantage in these cases as they are unable to correlate highly heterogeneous urban structures with the diagnostic parameterizations on which they are based. In this paper, a fast and reasonably accurate computational fluid dynamics (CFD) technique that solves the Navier-Stokes equations for complex urban areas has been developed called QUIC-CFD (Q-CFD). This technique represents an intermediate balance between fast (on the order of minutes for a several block problem) and reasonably accurate solutions. The paper details the solution procedure and validates this model for various simple and complex urban geometries.

  5. BFL: a node and edge betweenness based fast layout algorithm for large scale networks

    PubMed Central

    Hashimoto, Tatsunori B; Nagasaki, Masao; Kojima, Kaname; Miyano, Satoru

    2009-01-01

    Background Network visualization would serve as a useful first step for analysis. However, current graph layout algorithms for biological pathways are insensitive to biologically important information, e.g. subcellular localization, biological node and graph attributes, or/and not available for large scale networks, e.g. more than 10000 elements. Results To overcome these problems, we propose the use of a biologically important graph metric, betweenness, a measure of network flow. This metric is highly correlated with many biological phenomena such as lethality and clusters. We devise a new fast parallel algorithm calculating betweenness to minimize the preprocessing cost. Using this metric, we also invent a node and edge betweenness based fast layout algorithm (BFL). BFL places the high-betweenness nodes to optimal positions and allows the low-betweenness nodes to reach suboptimal positions. Furthermore, BFL reduces the runtime by combining a sequential insertion algorim with betweenness. For a graph with n nodes, this approach reduces the expected runtime of the algorithm to O(n2) when considering edge crossings, and to O(n log n) when considering only density and edge lengths. Conclusion Our BFL algorithm is compared against fast graph layout algorithms and approaches requiring intensive optimizations. For gene networks, we show that our algorithm is faster than all layout algorithms tested while providing readability on par with intensive optimization algorithms. We achieve a 1.4 second runtime for a graph with 4000 nodes and 12000 edges on a standard desktop computer. PMID:19146673

  6. Options for a lunar base surface architecture

    NASA Astrophysics Data System (ADS)

    Roberts, Barney B.

    1992-02-01

    The Planet Surface Systems Office at the NASA Johnson Space Center has participated in an analysis of the Space Exploration Initiative architectures described in the Synthesis Group report. This effort involves a Systems Engineering and Integration effort to define point designs for evolving lunar and Mars bases that support substantial science, exploration, and resource production objectives. The analysis addresses systems-level designs; element requirements and conceptual designs; assessments of precursor and technology needs; and overall programmatics and schedules. This paper focuses on the results of the study of the Space Resource Utilization Architecture. This architecture develops the capability to extract useful materials from the indigenous resources of the Moon and Mars. On the Moon, a substantial infrastructure is emplaced which can support a crew of up to twelve. Two major process lines are developed: one produces oxygen, ceramics, and metals; the other produces hydrogen, helium, and other volatiles. The Moon is also used for a simulation of a Mars mission. Significant science capabilities are established in conjunction with resource development. Exploration includes remote global surveys and piloted sorties of local and regional areas. Science accommodations include planetary science, astronomy, and biomedical research. Greenhouses are established to provide a substantial amount of food needs.

  7. Options for a lunar base surface architecture

    NASA Technical Reports Server (NTRS)

    Roberts, Barney B.

    1992-01-01

    The Planet Surface Systems Office at the NASA Johnson Space Center has participated in an analysis of the Space Exploration Initiative architectures described in the Synthesis Group report. This effort involves a Systems Engineering and Integration effort to define point designs for evolving lunar and Mars bases that support substantial science, exploration, and resource production objectives. The analysis addresses systems-level designs; element requirements and conceptual designs; assessments of precursor and technology needs; and overall programmatics and schedules. This paper focuses on the results of the study of the Space Resource Utilization Architecture. This architecture develops the capability to extract useful materials from the indigenous resources of the Moon and Mars. On the Moon, a substantial infrastructure is emplaced which can support a crew of up to twelve. Two major process lines are developed: one produces oxygen, ceramics, and metals; the other produces hydrogen, helium, and other volatiles. The Moon is also used for a simulation of a Mars mission. Significant science capabilities are established in conjunction with resource development. Exploration includes remote global surveys and piloted sorties of local and regional areas. Science accommodations include planetary science, astronomy, and biomedical research. Greenhouses are established to provide a substantial amount of food needs.

  8. Wavelet-based vector quantization for high-fidelity compression and fast transmission of medical images.

    PubMed

    Mitra, S; Yang, S; Kustov, V

    1998-11-01

    Compression of medical images has always been viewed with skepticism, since the loss of information involved is thought to affect diagnostic information. However, recent research indicates that some wavelet-based compression techniques may not effectively reduce the image quality, even when subjected to compression ratios up to 30:1. The performance of a recently designed wavelet-based adaptive vector quantization is compared with a well-known wavelet-based scalar quantization technique to demonstrate the superiority of the former technique at compression ratios higher than 30:1. The use of higher compression with high fidelity of the reconstructed images allows fast transmission of images over the Internet for prompt inspection by radiologists at remote locations in an emergency situation, while higher quality images follow in a progressive manner if desired. Such fast and progressive transmission can also be used for downloading large data sets such as the Visible Human at a quality desired by the users for research or education. This new adaptive vector quantization uses a neural networks-based clustering technique for efficient quantization of the wavelet-decomposed subimages, yielding minimal distortion in the reconstructed images undergoing high compression. Results of compression up to 100:1 are shown for 24-bit color and 8-bit monochrome medical images. PMID:9848058

  9. Fast physical and pseudo random number generation based on a nonlinear optoelectronic oscillator

    NASA Astrophysics Data System (ADS)

    Mu, Penghua; Pan, Wei; Xiang, Shuiying; Li, Nianqiang; Liu, Xinkai; Zou, Xihua

    2015-08-01

    High speed random number generation (RNG) utilizing a nonlinear optoelectronic oscillator (OEO) is explored experimentally. It has been found that by simply adjusting either the injected optical power or the gain of the modulator driver, low complexity dynamics such as square wave, and more complex dynamics including fully developed chaos can be experimentally achieved. More importantly, physical RNG based on high-speed-oscilloscope measurements and pseudo RNG based on post-processing are implemented in this paper. The generated bit sequences pass all the standard statistical random tests, indicating that fast physical and pseudo RNG could be achieved based on the same OEO entropy source. Our results could provide further insight into the implementation of RNG based on chaotic optical systems.

  10. 3D structural analysis of proteins using electrostatic surfaces based on image segmentation

    PubMed Central

    Vlachakis, Dimitrios; Champeris Tsaniras, Spyridon; Tsiliki, Georgia; Megalooikonomou, Vasileios; Kossida, Sophia

    2016-01-01

    Herein, we present a novel strategy to analyse and characterize proteins using protein molecular electro-static surfaces. Our approach starts by calculating a series of distinct molecular surfaces for each protein that are subsequently flattened out, thus reducing 3D information noise. RGB images are appropriately scaled by means of standard image processing techniques whilst retaining the weight information of each protein’s molecular electrostatic surface. Then homogeneous areas in the protein surface are estimated based on unsupervised clustering of the 3D images, while performing similarity searches. This is a computationally fast approach, which efficiently highlights interesting structural areas among a group of proteins. Multiple protein electrostatic surfaces can be combined together and in conjunction with their processed images, they can provide the starting material for protein structural similarity and molecular docking experiments.

  11. Fast calculation with point-based method to make CGHs of the polygon model

    NASA Astrophysics Data System (ADS)

    Ogihara, Yuki; Ichikawa, Tsubasa; Sakamoto, Yuji

    2014-02-01

    Holography is one of the three-dimensional technology. Light waves from an object are recorded and reconstructed by using a hologram. Computer generated holograms (CGHs), which are made by simulating light propagation using a computer, are able to represent virtual object. However, an enormous amount of computation time is required to make CGHs. There are two primary methods of calculating CGHs: the polygon-based method and the point-based method. In the polygon-based method with Fourier transforms, CGHs are calculated using a fast Fourier transform (FFT). The calculation of complex objects composed of multiple polygons requires as many FFTs, so unfortunately the calculation time become enormous. In contrast, in the point-based method, it is easy to express complex objects, an enormous calculation time is still required. Graphics processing units (GPUs) have been used to speed up the calculations of point-based method. Because a GPU is specialized for parallel computation and CGH calculation can be calculated independently for each pixel. However, expressing a planar object by the point-based method requires a signi cant increase in the density of points and consequently in the number of point light sources. In this paper, we propose a fast calculation algorithm to express planar objects by the point-based method with a GPU. The proposed method accelerate calculation by obtaining the distance between a pixel and the point light source from the adjacent point light source by a difference method. Under certain speci ed conditions, the difference between adjacent object points becomes constant, so the distance is obtained by only an additions. Experimental results showed that the proposed method is more effective than the polygon-based method with FFT when the number of polygons composing an objects are high.

  12. Fast plasmid based protein expression analysis in insect cells using an automated SplitGFP screen.

    PubMed

    Bleckmann, Maren; Schmelz, Stefan; Schinkowski, Christian; Scrima, Andrea; van den Heuvel, Joop

    2016-09-01

    Recombinant protein expression often presents a bottleneck for the production of proteins for use in many areas of animal-cell biotechnology. Difficult-to-express proteins require the generation of numerous expression constructs, where popular prokaryotic screening systems often fail to identify expression of multi domain or full-length protein constructs. Post-translational modified mammalian proteins require an alternative host system such as insect cells using the Baculovirus Expression Vector System (BEVS). Unfortunately this is time-, labor-, and cost-intensive. It is clearly desirable to find an automated and miniaturized fast multi-sample screening method for protein expression in such systems. With this in mind, in this paper a high-throughput initial expression screening method is described using an automated Microcultivation system in conjunction with fast plasmid based transient transfection in insect cells for the efficient generation of protein constructs. The applicability of the system is demonstrated for the difficult to express Nucleotide-binding Oligomerization Domain-containing protein 2 (NOD2). To enable detection of proper protein expression the rather weak plasmid based expression has been improved by a sensitive inline detection system. Here we present the functionality and application of the sensitive SplitGFP (split green fluorescent protein) detection system in insect cells. The successful expression of constructs is monitored by direct measurement of the fluorescence in the BioLector Microcultivation system. Additionally, we show that the results obtained with our plasmid-based SplitGFP protein expression screen correlate directly to the level of soluble protein produced in BEVS. In conclusion our automated SplitGFP screen outlines a sensitive, fast and reliable method reducing the time and costs required for identifying the optimal expression construct prior to large scale protein production in baculovirus infected insect cells

  13. Direct laser beam interference patterning technique for fast high aspect ratio surface structuring

    NASA Astrophysics Data System (ADS)

    Indrisiunas, Simonas; Voisiat, Bogdan; Žukauskas, Airidas; Račiukaitis, Gediminas

    2015-03-01

    New results on development of the Direct Laser Interference Patterning (DLIP) technique using the interference of several beams to directly ablate the material are presented. The method is capable of producing sub-wavelength features not limited by a beam spot size and is an effective method of forming two-dimensional periodic structures on relatively large area with just a single laser shot. Surface texturing speed of DLIP method and the direct laser writing was compared. Fabrication time reduction up to a few orders of magnitude using DLIP was evaluated. The sub-period scanning technique was applied for formation of the complex periodic structures. A new method of laser scanning for fabrication of periodic structures on large areas without any visible stitching signs between laser irradiation spots was tested.

  14. Design of hybrid structure for fast and deep surface plasmon polariton modulation.

    PubMed

    Pang, Chenlei; Lu, Hangwen; Xu, Pengfei; Qian, Haoliang; Liu, Xiaowei; Liu, Xu; Li, Haifeng; Yang, Qing

    2016-07-25

    The electric and optical performance of different surface plasmon polariton (SPP) electric modulation structures have been investigated by comparing the response speed and modulation figures of merit (FoM). To overcome the capacitance limitation and improve the response speed, we proposed a novel silver-graphene-dielectric-graphene-semiconductor vertical structure. Semiconductor nano-waveguide is introduced to help reduce ohmic loss in silver waveguide and reflect the leaked optical field back, enhancing the modulation depth. Through optimization, a device with estimated modulation FoM of more than 70% and hundreds of GHz response speed and 3 dB bandwidth is designed, which may bring great improvement to previous optical modulators. PMID:27464158

  15. Design of a Low Power, Fast-Spectrum, Liquid-Metal Cooled Surface Reactor System

    SciTech Connect

    Marcille, T. F.; Poston, D. I.; Kapernick, R. J.; Dixon, D. D.; Fischer, G. A.; Doherty, S. P.

    2006-01-20

    In the current 2005 US budget environment, competition for fiscal resources make funding for comprehensive space reactor development programs difficult to justify and accommodate. Simultaneously, the need to develop these systems to provide planetary and deep space-enabling power systems is increasing. Given that environment, designs intended to satisfy reasonable near-term surface missions, using affordable technology-ready materials and processes warrant serious consideration. An initial lunar application design incorporating a stainless structure, 880 K pumped NaK coolant system and a stainless/UO2 fuel system can be designed, fabricated and tested for a fraction of the cost of recent high-profile reactor programs (JIMO, SP-100). Along with the cost reductions associated with the use of qualified materials and processes, this design offers a low-risk, high-reliability implementation associated with mission specific low temperature, low burnup, five year operating lifetime requirements.

  16. Fast, high-resolution surface potential measurements in air with heterodyne Kelvin probe force microscopy

    NASA Astrophysics Data System (ADS)

    Garrett, Joseph L.; Munday, Jeremy N.

    2016-06-01

    Kelvin probe force microscopy (KPFM) adapts an atomic force microscope to measure electric potential on surfaces at nanometer length scales. Here we demonstrate that Heterodyne-KPFM enables scan rates of several frames per minute in air, and concurrently maintains spatial resolution and voltage sensitivity comparable to frequency-modulation KPFM, the current spatial resolution standard. Two common classes of topography-coupled artifacts are shown to be avoidable with H-KPFM. A second implementation of H-KPFM is also introduced, in which the voltage signal is amplified by the first cantilever resonance for enhanced sensitivity. The enhanced temporal resolution of H-KPFM can enable the imaging of many dynamic processes, such as such as electrochromic switching, phase transitions, and device degredation (battery, solar, etc), which take place over seconds to minutes and involve changes in electric potential at nanometer lengths.

  17. Fast Differential Analysis of Propolis Using Surface Desorption Atmospheric Pressure Chemical Ionization Mass Spectrometry

    PubMed Central

    Huang, Xue-yong; Guo, Xia-li; Luo, Huo-lin; Fang, Xiao-wei; Zhu, Teng-gao; Zhang, Xing-lei; Chen, Huan-wen; Luo, Li-ping

    2015-01-01

    Mass spectral fingerprints of 24 raw propolis samples, including 23 from China and one from the United States, were directly obtained using surface desorption atmospheric pressure chemical ionization mass spectrometry (SDAPCI-MS) without sample pretreatment. Under the optimized experimental conditions, the most abundant signals were detected in the mass ranges of 70 to 500 m/z and 200 to 350 m/z, respectively. Principal component analyses (PCA) for the two mass ranges showed similarities in that the colors had a significant correlation with the first two PCs; in contrast there was no correlation with the climatic zones from which the samples originated. Analytes such as chrysin, pinocembrin, and quercetin were detected and identified using multiple stage mass spectrometry within 3 min. Therefore, SDAPCI-MS can be used for rapid and reliable high-throughput analysis of propolis. PMID:26339245

  18. Fast, high-resolution surface potential measurements in air with heterodyne Kelvin probe force microscopy.

    PubMed

    Garrett, Joseph L; Munday, Jeremy N

    2016-06-17

    Kelvin probe force microscopy (KPFM) adapts an atomic force microscope to measure electric potential on surfaces at nanometer length scales. Here we demonstrate that Heterodyne-KPFM enables scan rates of several frames per minute in air, and concurrently maintains spatial resolution and voltage sensitivity comparable to frequency-modulation KPFM, the current spatial resolution standard. Two common classes of topography-coupled artifacts are shown to be avoidable with H-KPFM. A second implementation of H-KPFM is also introduced, in which the voltage signal is amplified by the first cantilever resonance for enhanced sensitivity. The enhanced temporal resolution of H-KPFM can enable the imaging of many dynamic processes, such as such as electrochromic switching, phase transitions, and device degredation (battery, solar, etc), which take place over seconds to minutes and involve changes in electric potential at nanometer lengths. PMID:27159082

  19. Design of a Low Power, Fast-Spectrum, Liquid-Metal Cooled Surface Reactor System

    NASA Astrophysics Data System (ADS)

    Marcille, T. F.; Dixon, D. D.; Fischer, G. A.; Doherty, S. P.; Poston, D. I.; Kapernick, R. J.

    2006-01-01

    In the current 2005 US budget environment, competition for fiscal resources make funding for comprehensive space reactor development programs difficult to justify and accommodate. Simultaneously, the need to develop these systems to provide planetary and deep space-enabling power systems is increasing. Given that environment, designs intended to satisfy reasonable near-term surface missions, using affordable technology-ready materials and processes warrant serious consideration. An initial lunar application design incorporating a stainless structure, 880 K pumped NaK coolant system and a stainless/UO2 fuel system can be designed, fabricated and tested for a fraction of the cost of recent high-profile reactor programs (JIMO, SP-100). Along with the cost reductions associated with the use of qualified materials and processes, this design offers a low-risk, high-reliability implementation associated with mission specific low temperature, low burnup, five year operating lifetime requirements.

  20. Fast and Flexible Movable Vision Measurement for the Surface of a Large-Sized Object

    PubMed Central

    Liu, Zhen; Li, Xiaojing; Li, Fengjiao; Wei, Xinguo; Zhang, Guanjun

    2015-01-01

    The presented movable vision measurement for the three-dimensional (3D) surface of a large-sized object has the advantages of system simplicity, low cost, and high accuracy. Aiming at addressing the problems of existing movable vision measurement methods, a more suitable method for large-sized products on industrial sites is introduced in this paper. A raster binocular vision sensor and a wide-field camera are combined to form a 3D scanning sensor. During measurement, several planar targets are placed around the object to be measured. With the planar target as an intermediary, the local 3D data measured by the scanning sensor are integrated into the global coordinate system. The effectiveness of the proposed method is verified through physical experiments. PMID:25723142

  1. Surface Interrogation Scanning Electrochemical Microscopy of Ni(1-x)Fe(x)OOH (0 < x < 0.27) Oxygen Evolving Catalyst: Kinetics of the "fast" Iron Sites.

    PubMed

    Ahn, Hyun S; Bard, Allen J

    2016-01-13

    Nickel-iron mixed metal oxyhydroxides have attracted significant attention as an oxygen evolution reaction (OER) catalyst for solar fuel renewable energy applications. Here, we performed surface-selective and time-dependent redox titrations to directly measure the surface OER kinetics of Ni(IV) and Fe(IV) in NiOOH, FeOOH, and Ni(1-x)Fe(x)OOH (0 < x < 0.27) electrodes. Most importantly, two types of surface sites exhibiting "fast" and "slow" kinetics were found, where the fraction of "fast" sites in Ni(1-x)Fe(x)OOH matched the iron atom content in the film. This finding provides experimental support to the theory-proposed model of active sites in Ni(1-x)Fe(x)OOH. The OER rate constant of the "fast" site was 1.70 s(-1) per atom. PMID:26645678

  2. Fiber-optic pulsed photothermal radiometry for fast surface-temperature measurements.

    PubMed

    Eyal, O; Scharf, V; Katzir, A

    1998-09-01

    Temperature measurement based on pulsed photothermal radiometry is described. In this technique a body is irradiated by a laser pulse and its temperature is inferred from the shape of the emitted photothermal-signal curve. A prototypical system based on a pulsed CO(2) laser, an IR detector, and IR-transmitting silver halide optical fibers was constructed and used to evaluate the feasibility of this technique. An important feature of the technique is that changes in sample emissivity or geometric factors do not introduce errors in the temperature determination. Theory, simulation, and experimental results are given and discussed. PMID:18286089

  3. Data acquisition system based on fast waveform digitizers for large neutrino detectors

    NASA Astrophysics Data System (ADS)

    Lukyanchenko, G.; Litvinovich, E.

    2016-02-01

    For large volume neutrino and antineutrino detectors it is crucial to have an efficient data acquisition system capable of digitizing data from thousands of detection channels. Here we present a flexible DAQ system architecture consisting of a large number of fast waveform digitizers and configurable FPGA-based trigger logic. The current implementation of the system is functioning in the Borexino neutrino detector providing zero dead time spectroscopy data in the energy range from 1 up to 100 MeV. Acquisition complex in combination with our custom analysis software is successfully being used for registration of geoneutrinos, as well as search for neutrino signal from GRBs, solar netrino spectroscopy and other applications.

  4. A Fast and Precise Indoor Localization Algorithm Based on an Online Sequential Extreme Learning Machine †

    PubMed Central

    Zou, Han; Lu, Xiaoxuan; Jiang, Hao; Xie, Lihua

    2015-01-01

    Nowadays, developing indoor positioning systems (IPSs) has become an attractive research topic due to the increasing demands on location-based service (LBS) in indoor environments. WiFi technology has been studied and explored to provide indoor positioning service for years in view of the wide deployment and availability of existing WiFi infrastructures in indoor environments. A large body of WiFi-based IPSs adopt fingerprinting approaches for localization. However, these IPSs suffer from two major problems: the intensive costs of manpower and time for offline site survey and the inflexibility to environmental dynamics. In this paper, we propose an indoor localization algorithm based on an online sequential extreme learning machine (OS-ELM) to address the above problems accordingly. The fast learning speed of OS-ELM can reduce the time and manpower costs for the offline site survey. Meanwhile, its online sequential learning ability enables the proposed localization algorithm to adapt in a timely manner to environmental dynamics. Experiments under specific environmental changes, such as variations of occupancy distribution and events of opening or closing of doors, are conducted to evaluate the performance of OS-ELM. The simulation and experimental results show that the proposed localization algorithm can provide higher localization accuracy than traditional approaches, due to its fast adaptation to various environmental dynamics. PMID:25599427

  5. A fast and precise indoor localization algorithm based on an online sequential extreme learning machine.

    PubMed

    Zou, Han; Lu, Xiaoxuan; Jiang, Hao; Xie, Lihua

    2015-01-01

    Nowadays, developing indoor positioning systems (IPSs) has become an attractive research topic due to the increasing demands on location-based service (LBS) in indoor environments. WiFi technology has been studied and explored to provide indoor positioning service for years in view of the wide deployment and availability of existing WiFi infrastructures in indoor environments. A large body of WiFi-based IPSs adopt fingerprinting approaches for localization. However, these IPSs suffer from two major problems: the intensive costs of manpower and time for offline site survey and the inflexibility to environmental dynamics. In this paper, we propose an indoor localization algorithm based on an online sequential extreme learning machine (OS-ELM) to address the above problems accordingly. The fast learning speed of OS-ELM can reduce the time and manpower costs for the offline site survey. Meanwhile, its online sequential learning ability enables the proposed localization algorithm to adapt in a timely manner to environmental dynamics. Experiments under specific environmental changes, such as variations of occupancy distribution and events of opening or closing of doors, are conducted to evaluate the performance of OS-ELM. The simulation and experimental results show that the proposed localization algorithm can provide higher localization accuracy than traditional approaches, due to its fast adaptation to various environmental dynamics. PMID:25599427

  6. A catheterization-training simulator based on a fast multigrid solver.

    PubMed

    Li, Shun; Guo, Jixiang; Wang, Qiong; Meng, Qiang; Chui, Yim-Pan; Qin, Jing; Heng, Pheng-Ann

    2012-01-01

    A VR-based simulator helps trainees develop skills for catheterization, a fundamental but difficult procedure in vascular interventional radiology. A deformable model simulates the complicated behavior of guide wires and catheters, using the principle of minimum total potential energy. A fast, stable multigrid solver ensures realistic simulation and real-time interaction. In addition, the system employs geometrically and topologically accurate vascular models based on improved parallel-transport frames, and it implements efficient collision detection. Experiments evaluated the method's stability, the solver's execution time, how well the simulation preserved the catheter's curved tip, and the catheter deformation's realism. An empirical study based on a typical selective-catheterization procedure assessed the system's feasibility and effectiveness. PMID:24807310

  7. A fast-moving copper-based molecular shuttle: synthesis and dynamic properties.

    PubMed

    Durola, Fabien; Lux, Jacques; Sauvage, Jean-Pierre

    2009-01-01

    Fast-track changes: The synthesis of a new copper-based molecular shuttle is described, with a coordinating macrocycle based on a nonhindering but endocyclic ligand (see scheme), which makes the ligand exchange easier, and thus the motions of the ring along the thread faster.The present report deals with the synthesis of a two-station [2]rotaxane consisting of a dpbiiq-incorporating macrocycle (dpbiiq: 8,8'-diphenyl-3,3'-biisoquinoline) threaded by a coordinating fragment whose complexing units are a dpp and a terpy ligand (dpp: 2,9-diphenyl-1,10-phenanthroline; terpy: 2,2',6',2"-terpyridine). The [2]rotaxane was prepared in 11 steps from commercially available or easy-to-make molecules, without taking into account the preparation of the dpbiiq-containing 39-membered ring, which was available in our group. The ring-incorporated bidentate chelate is at the same time endocyclic and sterically nonhindering, which is a specific property of the dpbiiq-coordinating unit. This unique feature has a profound influence on the rate of the ring-and-copper translation motion between the two stations of the axle. Based on an analogous multistep strategy, a related molecular shuttle has also been prepared that contains exactly the same axle and stoppers as the first compound but whose threaded ring incorporates the sterically hindering dpp chelate. The translation motions of this other system are several orders of magnitude slower than the corresponding movements of the dpbiiq-based compound. The motion corresponding to the rearrangement of the unstable five-coordinate copper(I) form of the compounds is relatively fast for both shuttles; the half lifetime of the five-coordinate Cu(I) species being below 20 ms for the dpbiiq-containing system and below 1 s for the dpp-based molecule. The reverse motion corresponding to the rearrangement of the four-coordinate copper(II) complexes is much slower, especially for the dpp-based system. It is of the order of several hours for the dpp-based

  8. Evaluation of passive alpha detectors for sensitive/inexpensive/fast characterization of radiological contamination on surfaces and in soils

    SciTech Connect

    Meyer, K.E.; Gammage, R.B.; Dudney, C.S.; Kotrappa, P.; Wheeler, R.; Salasky, M.

    1994-04-01

    Passive alpha-particle detectors, originally developed for indoor radon measurements, offer the potential for cost-effective and sensitive measurements of radiological contamination in soils and on surfaces for field screening and radiological survey applications. We have carried out field demonstrations of electret ionization chambers (EIC`s) and alpha track detectors (ATD`s). The EIC`s offer the advantages of immediate on-site readout, good sensitivity, ruggedness, and simplicity of operation. The use of parallel screened and unscreened EIC measurement allows the separation of alpha-particle response from radon/gamma/beta response. The advantages of the ATD`s include the potential for hot-particle counting, permanent records of contaminated and post-remediation activity levels, and inexpensive depth profiling of contamination in soil. At this time, the ATD`s are routinely shipped to the vendor after exposure in the field for processing and readout. It is feasible that the necessary processing and readout equipment could be deployed in a mobile laboratory for fast on-site analysis. We will present results from environmental measurements at the Nevada Test Site and indoor surface contamination measurements carried out at ORNL.

  9. Feature Article: Fast scanning tunnelling microscopy as a tool to understand changes on metal surfaces: from nanostructures to single atoms

    NASA Astrophysics Data System (ADS)

    Morgenstern, Karina

    2005-03-01

    The Feature Article [1] describes how structural changes in metallic nanostructures can be followed with fast scanning tunneling microscopy (STM). The title page shows the same spot of a Ag(111) surface at room temperature, imaged with STM approximately one hour apart. Intrinsic changes to prepared nano-structures are marked as Brownian motion of vacancy islands (rectangle), coalescence of two vacancy islands (hexagon), and decay of an adatom island (circle).Karina Morgenstern is now professor at the University of Hannover. Her research is placed within the field of nanoscience and is in particular devoted to thermally activated processes of metallic nanostructures, electronically activated reactions of molecules on metallic surfaces, and water-metal interactions.The present issue of physica status solidi (b) also contains the article Apperance of copper d9 defect centres in wide-gap CdSe nanoparticles: A high-fequency EPR study by N. R. J. Poolton et al. as Editor's Choice [2] as well as several papers on electrical and nonlinear optical properties from the European Conference on Organised Films (ECOF 2004) chaired by José Antonio de Saja, Valladolid.

  10. Efficient implementations of pipelined CORDIC-based IIR digital filters using fast orthonormal μ-rotations

    NASA Astrophysics Data System (ADS)

    Ma, Jun; Parhi, Keshab K.; Hekstra, Gerben J.; Deprettere, Ed F. A.

    1998-10-01

    CORDIC based IIR digital filters are orthogonal filters whose internal computations consist of orthogonal transformations. These filters possess desirable properties for VLSI implementations such as regularity, local connection, low sensitivity to finite word-length implementation, and elimination of limit cycles. Recently, fine-grain pipelined CORDIC based IIR digital filter architectures which can perform the filtering operations at arbitrarily high sample rates at the cost of linear increase in hardware complexity have been developed. These pipelined architectures consists of only Givens rotations and a few additions which can be mapped onto CORDIC arithmetic based processors. However, in practical applications, implementations of GIvens rotations using traditional CORDIC arithmetic are quite expensive. For example, for 16 bit accuracy, using floating point data format with 16 bit mantissa and 5 bit exponent, it will require approximately 20 pairs of shift-add operations for one Givens rotation. In this paper, we propose an efficient implementation of pipelined CORDIC based IIR digital filters based on fast orthonormal (mu) -rotations. Using this method, the Givens rotations are approximated by angel corresponding to orthonormal (mu) -rotations, which are based on the idea of CORDIC and can perform rotation with minimal number of shift-add operations. We present various methods of construction for such orthonormal (mu) -rotations. A significant reduction of the number of required shift-add operations is achieved. All types of fast rotations can be implemented as a cascade of only four basic types of shift-add stages. These stages can be executed on a modified floating-point CORDIC architecture, making the pipelined filter highly suitable for VLSI implementations.

  11. Surface modified amorphous ribbon based magnetoimpedance biosensor.

    PubMed

    Kurlyandskaya, Galina V; Fal Miyar, Vanessa

    2007-04-15

    Magnetoimpedance (MI) changes due to surface modification of the sensitive element caused by human urine, were studied with the aim of creating a robust biosensor working on a principle of electrochemical magnetoimpedance spectroscopy. A biosensor prototype with an as-quenched amorphous ribbon sensitive element was designed and calibrated for a frequency range of 0.5-10 MHz at a current intensity of 60 mA. Measurements as a function of the exposure time were made both in a regime where chemical surface modification and MI measurements were separated as well as in a regime where they were done simultaneously. The MI variation was explained by the change of the surface magnetic anisotropy. It was shown that the magnetoimpedance effect can be successfully employed as a new option to probe the electric features of the Fe(5)Co(70)Si(15)B(10) amorphous ribbon magnetic electrode surface modified by human urine. PMID:16914305

  12. Experience With Bayesian Image Based Surface Modeling

    NASA Technical Reports Server (NTRS)

    Stutz, John C.

    2005-01-01

    Bayesian surface modeling from images requires modeling both the surface and the image generation process, in order to optimize the models by comparing actual and generated images. Thus it differs greatly, both conceptually and in computational difficulty, from conventional stereo surface recovery techniques. But it offers the possibility of using any number of images, taken under quite different conditions, and by different instruments that provide independent and often complementary information, to generate a single surface model that fuses all available information. I describe an implemented system, with a brief introduction to the underlying mathematical models and the compromises made for computational efficiency. I describe successes and failures achieved on actual imagery, where we went wrong and what we did right, and how our approach could be improved. Lastly I discuss how the same approach can be extended to distinct types of instruments, to achieve true sensor fusion.

  13. GPU-based ultra-fast dose calculation using a finite size pencil beam model

    NASA Astrophysics Data System (ADS)

    Gu, Xuejun; Choi, Dongju; Men, Chunhua; Pan, Hubert; Majumdar, Amitava; Jiang, Steve B.

    2009-10-01

    Online adaptive radiation therapy (ART) is an attractive concept that promises the ability to deliver an optimal treatment in response to the inter-fraction variability in patient anatomy. However, it has yet to be realized due to technical limitations. Fast dose deposit coefficient calculation is a critical component of the online planning process that is required for plan optimization of intensity-modulated radiation therapy (IMRT). Computer graphics processing units (GPUs) are well suited to provide the requisite fast performance for the data-parallel nature of dose calculation. In this work, we develop a dose calculation engine based on a finite-size pencil beam (FSPB) algorithm and a GPU parallel computing framework. The developed framework can accommodate any FSPB model. We test our implementation in the case of a water phantom and the case of a prostate cancer patient with varying beamlet and voxel sizes. All testing scenarios achieved speedup ranging from 200 to 400 times when using a NVIDIA Tesla C1060 card in comparison with a 2.27 GHz Intel Xeon CPU. The computational time for calculating dose deposition coefficients for a nine-field prostate IMRT plan with this new framework is less than 1 s. This indicates that the GPU-based FSPB algorithm is well suited for online re-planning for adaptive radiotherapy.

  14. Distributed Function Mining for Gene Expression Programming Based on Fast Reduction.

    PubMed

    Deng, Song; Yue, Dong; Yang, Le-chan; Fu, Xiong; Feng, Ya-zhou

    2016-01-01

    For high-dimensional and massive data sets, traditional centralized gene expression programming (GEP) or improved algorithms lead to increased run-time and decreased prediction accuracy. To solve this problem, this paper proposes a new improved algorithm called distributed function mining for gene expression programming based on fast reduction (DFMGEP-FR). In DFMGEP-FR, fast attribution reduction in binary search algorithms (FAR-BSA) is proposed to quickly find the optimal attribution set, and the function consistency replacement algorithm is given to solve integration of the local function model. Thorough comparative experiments for DFMGEP-FR, centralized GEP and the parallel gene expression programming algorithm based on simulated annealing (parallel GEPSA) are included in this paper. For the waveform, mushroom, connect-4 and musk datasets, the comparative results show that the average time-consumption of DFMGEP-FR drops by 89.09%%, 88.85%, 85.79% and 93.06%, respectively, in contrast to centralized GEP and by 12.5%, 8.42%, 9.62% and 13.75%, respectively, compared with parallel GEPSA. Six well-studied UCI test data sets demonstrate the efficiency and capability of our proposed DFMGEP-FR algorithm for distributed function mining. PMID:26751200

  15. Predictive-based cross line for fast motion estimation in MPEG-4 videos

    NASA Astrophysics Data System (ADS)

    Fang, Hui; Jiang, Jianmin

    2004-05-01

    Block-based motion estimation is widely used in the field of video compression due to its feature of high processing speed and competitive compression efficiency. In the chain of compression operations, however, motion estimation still remains to be the most time-consuming process. As a result, any improvement in fast motion estimation will enable practical applications of MPEG techniques more efficient and more sustainable in terms of both processing speed and computing cost. To meet the requirements of real-time compression of videos and image sequences, such as video conferencing, remote video surveillance and video phones etc., we propose a new search algorithm and achieve fast motion estimation for MPEG compression standards based on existing algorithm developments. To evaluate the proposed algorithm, we adopted MPEG-4 and the prediction line search algorithm as the benchmarks to design the experiments. Their performances are measured by: (i) reconstructed video quality; (ii) processing time. The results reveal that the proposed algorithm provides a competitive alternative to the existing prediction line search algorithm. In comparison with MPEG-4, the proposed algorithm illustrates significant advantages in terms of processing speed and video quality.

  16. GPU-based ultra-fast dose calculation using a finite size pencil beam model.

    PubMed

    Gu, Xuejun; Choi, Dongju; Men, Chunhua; Pan, Hubert; Majumdar, Amitava; Jiang, Steve B

    2009-10-21

    Online adaptive radiation therapy (ART) is an attractive concept that promises the ability to deliver an optimal treatment in response to the inter-fraction variability in patient anatomy. However, it has yet to be realized due to technical limitations. Fast dose deposit coefficient calculation is a critical component of the online planning process that is required for plan optimization of intensity-modulated radiation therapy (IMRT). Computer graphics processing units (GPUs) are well suited to provide the requisite fast performance for the data-parallel nature of dose calculation. In this work, we develop a dose calculation engine based on a finite-size pencil beam (FSPB) algorithm and a GPU parallel computing framework. The developed framework can accommodate any FSPB model. We test our implementation in the case of a water phantom and the case of a prostate cancer patient with varying beamlet and voxel sizes. All testing scenarios achieved speedup ranging from 200 to 400 times when using a NVIDIA Tesla C1060 card in comparison with a 2.27 GHz Intel Xeon CPU. The computational time for calculating dose deposition coefficients for a nine-field prostate IMRT plan with this new framework is less than 1 s. This indicates that the GPU-based FSPB algorithm is well suited for online re-planning for adaptive radiotherapy. PMID:19794244

  17. TH-E-BRE-08: GPU-Monte Carlo Based Fast IMRT Plan Optimization

    SciTech Connect

    Li, Y; Tian, Z; Shi, F; Jiang, S; Jia, X

    2014-06-15

    Purpose: Intensity-modulated radiation treatment (IMRT) plan optimization needs pre-calculated beamlet dose distribution. Pencil-beam or superposition/convolution type algorithms are typically used because of high computation speed. However, inaccurate beamlet dose distributions, particularly in cases with high levels of inhomogeneity, may mislead optimization, hindering the resulting plan quality. It is desire to use Monte Carlo (MC) methods for beamlet dose calculations. Yet, the long computational time from repeated dose calculations for a number of beamlets prevents this application. It is our objective to integrate a GPU-based MC dose engine in lung IMRT optimization using a novel two-steps workflow. Methods: A GPU-based MC code gDPM is used. Each particle is tagged with an index of a beamlet where the source particle is from. Deposit dose are stored separately for beamlets based on the index. Due to limited GPU memory size, a pyramid space is allocated for each beamlet, and dose outside the space is neglected. A two-steps optimization workflow is proposed for fast MC-based optimization. At first step, rough beamlet dose calculations is conducted with only a small number of particles per beamlet. Plan optimization is followed to get an approximated fluence map. In the second step, more accurate beamlet doses are calculated, where sampled number of particles for a beamlet is proportional to the intensity determined previously. A second-round optimization is conducted, yielding the final Result. Results: For a lung case with 5317 beamlets, 10{sup 5} particles per beamlet in the first round, and 10{sup 8} particles per beam in the second round are enough to get a good plan quality. The total simulation time is 96.4 sec. Conclusion: A fast GPU-based MC dose calculation method along with a novel two-step optimization workflow are developed. The high efficiency allows the use of MC for IMRT optimizations.

  18. Three-dimensional spatiotemporal features for fast content-based retrieval of focal liver lesions.

    PubMed

    Roy, Sharmili; Chi, Yanling; Liu, Jimin; Venkatesh, Sudhakar K; Brown, Michael S

    2014-11-01

    Content-based image retrieval systems for 3-D medical datasets still largely rely on 2-D image-based features extracted from a few representative slices of the image stack. Most 2 -D features that are currently used in the literature not only model a 3-D tumor incompletely but are also highly expensive in terms of computation time, especially for high-resolution datasets. Radiologist-specified semantic labels are sometimes used along with image-based 2-D features to improve the retrieval performance. Since radiological labels show large interuser variability, are often unstructured, and require user interaction, their use as lesion characterizing features is highly subjective, tedious, and slow. In this paper, we propose a 3-D image-based spatiotemporal feature extraction framework for fast content-based retrieval of focal liver lesions. All the features are computer generated and are extracted from four-phase abdominal CT images. Retrieval performance and query processing times for the proposed framework is evaluated on a database of 44 hepatic lesions comprising of five pathological types. Bull's eye percentage score above 85% is achieved for three out of the five lesion pathologies and for 98% of query lesions, at least one same type of lesion is ranked among the top two retrieved results. Experiments show that the proposed system's query processing is more than 20 times faster than other already published systems that use 2-D features. With fast computation time and high retrieval accuracy, the proposed system has the potential to be used as an assistant to radiologists for routine hepatic tumor diagnosis. PMID:24919041

  19. Optical coherence tomography biospeckle imaging for fast monitoring varying surface responses of a plant leaf under ozone stress

    NASA Astrophysics Data System (ADS)

    Srimal, L. K. T.; Kadono, H.; Rajagopalan, U. M.

    2013-05-01

    In this study, Optical Coherence Tomography (OCT) was used to investigate the effect of short term ozone exposure on both front and back surfaces of the leaves of Allium tuberosum plant. Plant leaves were subjected to treat with 240ppb level of ozone, and imaging data were acquired from back and front surfaces of the leaves. Variations of the biological activations were monitored based on the biospeckles. Standard deviations (SD) of OCT temporal signal at each point were calculated and used to visualize the effect of ozone exposure. Leaf back surface showed higher SDs in biospeckle OCT signal in comparison to these of the front surface. These observations prove that the short term ozone stress on plant can be investigated successively with biospeckle OCT imaging technique.

  20. Chloride-based fast homoepitaxial growth of 4H-SiC films in a vertical hot-wall CVD

    NASA Astrophysics Data System (ADS)

    Guoguo, Yan; Feng, Zhang; Yingxi, Niu; Fei, Yang; Xingfang, Liu; Lei, Wang; Wanshun, Zhao; Guosheng, Sun; Yiping, Zeng

    2016-06-01

    Chloride-based fast homoepitaxial growth of 4H-SiC epilayers was performed on 4° off-axis 4H-SiC substrates in a home-made vertical hot-wall chemical vapor deposition (CVD) system using H2‑SiH4‑C2H4‑HCl. The effect of the SiH4/H2 ratio and reactor pressure on the growth rate of 4H-SiC epilayers has been studied successively. The growth rate increase in proportion to the SiH4/H2 ratio and the influence mechanism of chlorine has been investigated. With the reactor pressure increasing from 40 to 100 Torr, the growth rate increased to 52 μm/hand then decreased to 47 μm/h, which is due to the joint effect of H2 and HCl etching as well as the formation of Si clusters at higher reactor pressure. The surface root mean square (RMS) roughness keeps around 1 nm with the growth rate increasing to 49 μm/h. The scanning electron microscope (SEM), Raman spectroscopy and X-ray diffraction (XRD) demonstrate that 96.7 μm thick 4H-SiC layers of good uniformity in thickness and doping with high crystal quality can be achieved. These results prove that chloride-based fast epitaxy is an advanced growth technique for 4H-SiC homoepitaxy. Project supported by the National High Technology R&D Program of China (No. 2014AA041402), the National Natural Science Foundation of China (Nos. 61474113, 61274007, 61574140), the Beijing Natural Science Foundation of China (Nos. 4132076, 4132074), the Program of State Grid Smart Grid Research Institute (No. SGRI-WD-71-14-004), and the Youth Innovation Promotion Association of CAS.

  1. Feature extraction method of bearing AE signal based on improved FAST-ICA and wavelet packet energy

    NASA Astrophysics Data System (ADS)

    Han, Long; Li, Cheng Wei; Guo, Song Lin; Su, Xun Wen

    2015-10-01

    In order to accomplish the feature extraction from a mixed fault signal of bearings, this paper proposes a feature extraction method based on the improved Fast-ICA algorithm and the wavelet packet energy spectrum. The conventional fast-ICA algorithm can only separate the mixed signals, while the convergence speed is relatively slow and the convergence effect is not sufficient. The method of the third-order Newton iteration is adopted in this paper to improve the Fast-ICA algorithm. Moreover, the improved Fast-ICA algorithm is confirmed to have a faster convergence speed and higher precision than the conventional Fast-ICA algorithm. The improved Fast-ICA algorithm is applied to separate the acoustic emission signal in which two kinds of fault components are comprised. The wavelet packet energy spectrum is used to extract the feature information in the separated samples. In addition, the fault diagnosis is performed based on the SVM algorithm. It is confirmed that the slight damage and fracture of a bearing can accurately be recognized. The results show that the improved FAST-ICA and wavelet packet energy method in feature extraction is sufficiently effective.

  2. Fast vaccine design and development based on correlates of protection (COPs)

    PubMed Central

    van Els, Cécile; Mjaaland, Siri; Næss, Lisbeth; Sarkadi, Julia; Gonczol, Eva; Smith Korsholm, Karen; Hansen, Jon; de Jonge, Jørgen; Kersten, Gideon; Warner, Jennifer; Semper, Amanda; Kruiswijk, Corine; Oftung, Fredrik

    2014-01-01

    New and reemerging infectious diseases call for innovative and efficient control strategies of which fast vaccine design and development represent an important element. In emergency situations, when time is limited, identification and use of correlates of protection (COPs) may play a key role as a strategic tool for accelerated vaccine design, testing, and licensure. We propose that general rules for COP-based vaccine design can be extracted from the existing knowledge of protective immune responses against a large spectrum of relevant viral and bacterial pathogens. Herein, we focus on the applicability of this approach by reviewing the established and up-coming COPs for influenza in the context of traditional and a wide array of new vaccine concepts. The lessons learnt from this field may be applied more generally to COP-based accelerated vaccine design for emerging infections. PMID:25424803

  3. Sensor fault diagnosis for fast steering mirror system based on Kalman filter

    NASA Astrophysics Data System (ADS)

    Wang, Hongju; Bao, Qiliang; Yang, Haifeng; Tao, Sunjie

    2015-10-01

    In this paper, to improve the reliability of a two-axis fast steering mirror system with minimum hardware consumption, a fault diagnosis method based on Kalman filter was developed. The dynamics model of the two-axis FSM was established firstly, and then the state-space form of the FSM was adopted. A bank of Kalman filters for fault detection was designed based on the state-space form. The effects of the sensor faults on the innovation sequence were investigated, and a decision approach called weighted sum-squared residual (WSSR) was adopted to isolate the sensor faults. Sensor faults could be detected and isolated when the decision statistics changed. Experimental studies on a prototype system show that the faulty sensor can be isolated timely and accurately. Meanwhile, the mathematical model of FSM system was used to design fault diagnosis scheme in the proposed method, thus the consumption of the hardware and space is decreased.

  4. A fast and low-power microelectromechanical system-based non-volatile memory device

    PubMed Central

    Lee, Sang Wook; Park, Seung Joo; Campbell, Eleanor E. B.; Park, Yung Woo

    2011-01-01

    Several new generation memory devices have been developed to overcome the low performance of conventional silicon-based flash memory. In this study, we demonstrate a novel non-volatile memory design based on the electromechanical motion of a cantilever to provide fast charging and discharging of a floating-gate electrode. The operation is demonstrated by using an electromechanical metal cantilever to charge a floating gate that controls the charge transport through a carbon nanotube field-effect transistor. The set and reset currents are unchanged after more than 11 h constant operation. Over 500 repeated programming and erasing cycles were demonstrated under atmospheric conditions at room temperature without degradation. Multinary bit programming can be achieved by varying the voltage on the cantilever. The operation speed of the device is faster than a conventional flash memory and the power consumption is lower than other memory devices. PMID:21364559

  5. Rule-based system for the fast identification of species of Indian Anopheline mosquitoes.

    PubMed

    Murty, U S; Jamil, K; Krishna, D; Reddy, P J

    1996-12-01

    In a developing country like India, classification and identification of the species of Anopheline mosquitoes in control operations of mosquito-borne diseases is of paramount importance. The WHO monograph, which describes the taxonomic data in the form of a pictorial key is generally difficult to understand by a non-taxonomist. Utilizing the principles of ID3 algorithm, a novel rule-based system, for the fast identification of unknown species of Indian Anopheline mosquitoes, is developed. The rule-based system is user-friendly, menu-driven and even a novice can make use of it in the identification of the unknown species with little practice. The above software is available on floppy disk and can be obtained with a minimum cost. This program can be ported on 5 1/4" or 3 1/2" floppy disk. PMID:9021267

  6. A fast and low-power microelectromechanical system-based non-volatile memory device.

    PubMed

    Lee, Sang Wook; Park, Seung Joo; Campbell, Eleanor E B; Park, Yung Woo

    2011-01-01

    Several new generation memory devices have been developed to overcome the low performance of conventional silicon-based flash memory. In this study, we demonstrate a novel non-volatile memory design based on the electromechanical motion of a cantilever to provide fast charging and discharging of a floating-gate electrode. The operation is demonstrated by using an electromechanical metal cantilever to charge a floating gate that controls the charge transport through a carbon nanotube field-effect transistor. The set and reset currents are unchanged after more than 11 h constant operation. Over 500 repeated programming and erasing cycles were demonstrated under atmospheric conditions at room temperature without degradation. Multinary bit programming can be achieved by varying the voltage on the cantilever. The operation speed of the device is faster than a conventional flash memory and the power consumption is lower than other memory devices. PMID:21364559

  7. Fast SAR Image Change Detection Using Bayesian Approach Based Difference Image and Modified Statistical Region Merging

    PubMed Central

    Ni, Weiping; Yan, Weidong; Bian, Hui; Wu, Junzheng

    2014-01-01

    A novel fast SAR image change detection method is presented in this paper. Based on a Bayesian approach, the prior information that speckles follow the Nakagami distribution is incorporated into the difference image (DI) generation process. The new DI performs much better than the familiar log ratio (LR) DI as well as the cumulant based Kullback-Leibler divergence (CKLD) DI. The statistical region merging (SRM) approach is first introduced to change detection context. A new clustering procedure with the region variance as the statistical inference variable is exhibited to tailor SAR image change detection purposes, with only two classes in the final map, the unchanged and changed classes. The most prominent advantages of the proposed modified SRM (MSRM) method are the ability to cope with noise corruption and the quick implementation. Experimental results show that the proposed method is superior in both the change detection accuracy and the operation efficiency. PMID:25258740

  8. Fast QRS Detection with an Optimized Knowledge-Based Method: Evaluation on 11 Standard ECG Databases

    PubMed Central

    Elgendi, Mohamed

    2013-01-01

    The current state-of-the-art in automatic QRS detection methods show high robustness and almost negligible error rates. In return, the methods are usually based on machine-learning approaches that require sufficient computational resources. However, simple-fast methods can also achieve high detection rates. There is a need to develop numerically efficient algorithms to accommodate the new trend towards battery-driven ECG devices and to analyze long-term recorded signals in a time-efficient manner. A typical QRS detection method has been reduced to a basic approach consisting of two moving averages that are calibrated by a knowledge base using only two parameters. In contrast to high-accuracy methods, the proposed method can be easily implemented in a digital filter design. PMID:24066054

  9. Theory of ion transport with fast acid-base equilibrations in bioelectrochemical systems

    NASA Astrophysics Data System (ADS)

    Dykstra, J. E.; Biesheuvel, P. M.; Bruning, H.; Ter Heijne, A.

    2014-07-01

    Bioelectrochemical systems recover valuable components and energy in the form of hydrogen or electricity from aqueous organic streams. We derive a one-dimensional steady-state model for ion transport in a bioelectrochemical system, with the ions subject to diffusional and electrical forces. Since most of the ionic species can undergo acid-base reactions, ion transport is combined in our model with infinitely fast ion acid-base equilibrations. The model describes the current-induced ammonia evaporation and recovery at the cathode side of a bioelectrochemical system that runs on an organic stream containing ammonium ions. We identify that the rate of ammonia evaporation depends not only on the current but also on the flow rate of gas in the cathode chamber, the diffusion of ammonia from the cathode back into the anode chamber, through the ion exchange membrane placed in between, and the membrane charge density.

  10. Fast multiscale directional filter bank-based speckle mitigation in gallstone ultrasound images.

    PubMed

    Leavline, Epiphany Jebamalar; Sutha, Shunmugam; Singh, Danasingh Asir Antony Gnana

    2014-02-01

    Speckle noise is a multiplicative type of noise commonly seen in medical and remote sensing images. It gives a granular appearance that degrades the quality of the recorded images. These speckle noise components need to be mitigated before the image is used for further processing and analysis. This paper presents a novel approach for removing granular speckle noise in gray scale images. We used an efficient multiscale image representation scheme named fast multiscale directional filter bank (FMDFB) along with simple threshold methods such as Vishushrink for image processing. It is a perfect reconstruction framework that can be used for a wide range of image processing applications because of its directionality and reduced computational complexity. The FMDFB-based speckle mitigation is appealing over other traditional multiscale approaches such as wavelets and Contourlets. Our experimental results show that the despeckling performance of the proposed method outperforms the wavelet and Contourlet-based despeckling methods. PMID:24562027

  11. Fast wavelength calibration method for spectrometers based on waveguide comb optical filter

    SciTech Connect

    Yu, Zhengang; Huang, Meizhen Zou, Ye; Wang, Yang; Sun, Zhenhua; Cao, Zhuangqi

    2015-04-15

    A novel fast wavelength calibration method for spectrometers based on a standard spectrometer and a double metal-cladding waveguide comb optical filter (WCOF) is proposed and demonstrated. By using the WCOF device, a wide-spectrum beam is comb-filtered, which is very suitable for spectrometer wavelength calibration. The influence of waveguide filter’s structural parameters and the beam incident angle on the comb absorption peaks’ wavelength and its bandwidth are also discussed. The verification experiments were carried out in the wavelength range of 200–1100 nm with satisfactory results. Comparing with the traditional wavelength calibration method based on discrete sparse atomic emission or absorption lines, the new method has some advantages: sufficient calibration data, high accuracy, short calibration time, fit for produce process, stability, etc.

  12. Theory of ion transport with fast acid-base equilibrations in bioelectrochemical systems.

    PubMed

    Dykstra, J E; Biesheuvel, P M; Bruning, H; Ter Heijne, A

    2014-07-01

    Bioelectrochemical systems recover valuable components and energy in the form of hydrogen or electricity from aqueous organic streams. We derive a one-dimensional steady-state model for ion transport in a bioelectrochemical system, with the ions subject to diffusional and electrical forces. Since most of the ionic species can undergo acid-base reactions, ion transport is combined in our model with infinitely fast ion acid-base equilibrations. The model describes the current-induced ammonia evaporation and recovery at the cathode side of a bioelectrochemical system that runs on an organic stream containing ammonium ions. We identify that the rate of ammonia evaporation depends not only on the current but also on the flow rate of gas in the cathode chamber, the diffusion of ammonia from the cathode back into the anode chamber, through the ion exchange membrane placed in between, and the membrane charge density. PMID:25122405

  13. Scanning tunneling microscopy-based in situ measurement of fast tool servo-assisted diamond turning micro-structures

    NASA Astrophysics Data System (ADS)

    Ju, Bing-Feng; Zhu, Wu-Le; Yang, Shunyao; Yang, Keji

    2014-05-01

    We propose a new in situ measurement system based on scanning tunneling microscopy (STM) to realize spiral scanning of a micro-structure without removing it after fast tool servo (FTS) cutting. To avoid distortion of the machined and measured surface, the center alignment of the FTS tool and the STM tip was first implemented by an STM in situ raster scan of two circular grooves cut by the machine tool. To originally observe the machined surface, the trace of the STM tip is put in accord with that of the FTS by setting the same start and end points of cutting and scanning and the same feed rate, and both are triggered by the subdivided rotary encoder of the spindle of the diamond turning machine. The profile data of the in situ spiral scanning of the machined micro-lens array can be fed back to compensate the depth of the cut to guarantee sub-micron form accuracy after second machining. The efficient spiral scanning, proper matching and accurate evaluation results demonstrate that the proposed STM in situ measurement approach is of great significance to the fabrication process.

  14. Fast intensity-modulated arc therapy based on 2-step beam segmentation

    SciTech Connect

    Bratengeier, Klaus; Gainey, Mark; Sauer, Otto A.; Richter, Anne; Flentje, Michael

    2011-01-15

    Purpose: Single or few arc intensity-modulated arc therapy (IMAT) is intended to be a time saving irradiation method, potentially replacing classical intensity-modulated radiotherapy (IMRT). The aim of this work was to evaluate the quality of different IMAT methods with the potential of fast delivery, which also has the possibility of adapting to the daily shape of the target volume. Methods: A planning study was performed. Novel double and triple IMAT techniques based on the geometrical analysis of the target organ at risk geometry (2-step IMAT) were evaluated. They were compared to step and shoot IMRT reference plans generated using direct machine parameter optimization (DMPO). Volumetric arc (VMAT) plans from commercial preclinical software (SMARTARC) were used as an additional benchmark to classify the quality of the novel techniques. Four cases with concave planning target volumes (PTV) with one dominating organ at risk (OAR), viz., the PTV/OAR combination of the ESTRO Quasimodo phantom, breast/lung, spine metastasis/spinal cord, and prostate/rectum, were used for the study. The composite objective value (COV) and other parameters representing the plan quality were studied. Results: The novel 2-step IMAT techniques with geometry based segment definition were as good as or better than DMPO and were superior to the SMARTARC VMAT techniques. For the spine metastasis, the quality measured by the COV differed only by 3%, whereas the COV of the 2-step IMAT for the other three cases decreased by a factor of 1.4-2.4 with respect to the reference plans. Conclusions: Rotational techniques based on geometrical analysis of the optimization problem (2-step IMAT) provide similar or better plan quality than DMPO or the research version of SMARTARC VMAT variants. The results justify pursuing the goal of fast IMAT adaptation based on 2-step IMAT techniques.

  15. Fast Rotation-Free Feature-Based Image Registration Using Improved N-SIFT and GMM-Based Parallel Optimization.

    PubMed

    Yu, Dongdong; Yang, Feng; Yang, Caiyun; Leng, Chengcai; Cao, Jian; Wang, Yining; Tian, Jie

    2016-08-01

    Image registration is a key problem in a variety of applications, such as computer vision, medical image processing, pattern recognition, etc., while the application of registration is limited by time consumption and the accuracy in the case of large pose differences. Aimed at these two kinds of problems, we propose a fast rotation-free feature-based rigid registration method based on our proposed accelerated-NSIFT and GMM registration-based parallel optimization (PO-GMMREG). Our method is accelerated by using the GPU/CUDA programming and preserving only the location information without constructing the descriptor of each interest point, while its robustness to missing correspondences and outliers is improved by converting the interest point matching to Gaussian mixture model alignment. The accuracy in the case of large pose differences is settled by our proposed PO-GMMREG algorithm by constructing a set of initial transformations. Experimental results demonstrate that our proposed algorithm can fast rigidly register 3-D medical images and is reliable for aligning 3-D scans even when they exhibit a poor initialization. PMID:26259212

  16. Fast Measurement and Reconstruction of Large Workpieces with Freeform Surfaces by Combining Local Scanning and Global Position Data

    PubMed Central

    Chen, Zhe; Zhang, Fumin; Qu, Xinghua; Liang, Baoqiu

    2015-01-01

    In this paper, we propose a new approach for the measurement and reconstruction of large workpieces with freeform surfaces. The system consists of a handheld laser scanning sensor and a position sensor. The laser scanning sensor is used to acquire the surface and geometry information, and the position sensor is utilized to unify the scanning sensors into a global coordinate system. The measurement process includes data collection, multi-sensor data fusion and surface reconstruction. With the multi-sensor data fusion, errors accumulated during the image alignment and registration process are minimized, and the measuring precision is significantly improved. After the dense accurate acquisition of the three-dimensional (3-D) coordinates, the surface is reconstructed using a commercial software piece, based on the Non-Uniform Rational B-Splines (NURBS) surface. The system has been evaluated, both qualitatively and quantitatively, using reference measurements provided by a commercial laser scanning sensor. The method has been applied for the reconstruction of a large gear rim and the accuracy is up to 0.0963 mm. The results prove that this new combined method is promising for measuring and reconstructing the large-scale objects with complex surface geometry. Compared with reported methods of large-scale shape measurement, it owns high freedom in motion, high precision and high measurement speed in a wide measurement range. PMID:26091396

  17. Fast Measurement and Reconstruction of Large Workpieces with Freeform Surfaces by Combining Local Scanning and Global Position Data.

    PubMed

    Chen, Zhe; Zhang, Fumin; Qu, Xinghua; Liang, Baoqiu

    2015-01-01

    In this paper, we propose a new approach for the measurement and reconstruction of large workpieces with freeform surfaces. The system consists of a handheld laser scanning sensor and a position sensor. The laser scanning sensor is used to acquire the surface and geometry information, and the position sensor is utilized to unify the scanning sensors into a global coordinate system. The measurement process includes data collection, multi-sensor data fusion and surface reconstruction. With the multi-sensor data fusion, errors accumulated during the image alignment and registration process are minimized, and the measuring precision is significantly improved. After the dense accurate acquisition of the three-dimensional (3-D) coordinates, the surface is reconstructed using a commercial software piece, based on the Non-Uniform Rational B-Splines (NURBS) surface. The system has been evaluated, both qualitatively and quantitatively, using reference measurements provided by a commercial laser scanning sensor. The method has been applied for the reconstruction of a large gear rim and the accuracy is up to 0.0963 mm. The results prove that this new combined method is promising for measuring and reconstructing the large-scale objects with complex surface geometry. Compared with reported methods of large-scale shape measurement, it owns high freedom in motion, high precision and high measurement speed in a wide measurement range. PMID:26091396

  18. Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies

    PubMed Central

    Sayyari, Erfan; Mirarab, Siavash

    2016-01-01

    Species tree reconstruction is complicated by effects of incomplete lineage sorting, commonly modeled by the multi-species coalescent model (MSC). While there has been substantial progress in developing methods that estimate a species tree given a collection of gene trees, less attention has been paid to fast and accurate methods of quantifying support. In this article, we propose a fast algorithm to compute quartet-based support for each branch of a given species tree with regard to a given set of gene trees. We then show how the quartet support can be used in the context of the MSC to compute (1) the local posterior probability (PP) that the branch is in the species tree and (2) the length of the branch in coalescent units. We evaluate the precision and recall of the local PP on a wide set of simulated and biological datasets, and show that it has very high precision and improved recall compared with multi-locus bootstrapping. The estimated branch lengths are highly accurate when gene tree estimation error is low, but are underestimated when gene tree estimation error increases. Computation of both the branch length and local PP is implemented as new features in ASTRAL. PMID:27189547

  19. Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies.

    PubMed

    Sayyari, Erfan; Mirarab, Siavash

    2016-07-01

    Species tree reconstruction is complicated by effects of incomplete lineage sorting, commonly modeled by the multi-species coalescent model (MSC). While there has been substantial progress in developing methods that estimate a species tree given a collection of gene trees, less attention has been paid to fast and accurate methods of quantifying support. In this article, we propose a fast algorithm to compute quartet-based support for each branch of a given species tree with regard to a given set of gene trees. We then show how the quartet support can be used in the context of the MSC to compute (1) the local posterior probability (PP) that the branch is in the species tree and (2) the length of the branch in coalescent units. We evaluate the precision and recall of the local PP on a wide set of simulated and biological datasets, and show that it has very high precision and improved recall compared with multi-locus bootstrapping. The estimated branch lengths are highly accurate when gene tree estimation error is low, but are underestimated when gene tree estimation error increases. Computation of both the branch length and local PP is implemented as new features in ASTRAL. PMID:27189547

  20. Fast single photon avalanche photodiode-based time-resolved diffuse optical tomography scanner

    PubMed Central

    Mu, Ying; Niedre, Mark

    2015-01-01

    Resolution in diffuse optical tomography (DOT) is a persistent problem and is primarily limited by high degree of light scatter in biological tissue. We showed previously that the reduction in photon scatter between a source and detector pair at early time points following a laser pulse in time-resolved DOT is highly dependent on the temporal response of the instrument. To this end, we developed a new single-photon avalanche photodiode (SPAD) based time-resolved DOT scanner. This instrument uses an array of fast SPADs, a femto-second Titanium Sapphire laser and single photon counting electronics. In combination, the overall instrument temporal impulse response function width was 59 ps. In this paper, we report the design of this instrument and validate its operation in symmetrical and irregularly shaped optical phantoms of approximately small animal size. We were able to accurately reconstruct the size and position of up to 4 absorbing inclusions, with increasing image quality at earlier time windows. We attribute these results primarily to the rapid response time of our instrument. These data illustrate the potential utility of fast SPAD detectors in time-resolved DOT. PMID:26417526

  1. A fast Monte Carlo code for proton transport in radiation therapy based on MCNPX

    PubMed Central

    Jabbari, Keyvan; Seuntjens, Jan

    2014-01-01

    An important requirement for proton therapy is a software for dose calculation. Monte Carlo is the most accurate method for dose calculation, but it is very slow. In this work, a method is developed to improve the speed of dose calculation. The method is based on pre-generated tracks for particle transport. The MCNPX code has been used for generation of tracks. A set of data including the track of the particle was produced in each particular material (water, air, lung tissue, bone, and soft tissue). This code can transport protons in wide range of energies (up to 200 MeV for proton). The validity of the fast Monte Carlo (MC) code is evaluated with data MCNPX as a reference code. While analytical pencil beam algorithm transport shows great errors (up to 10%) near small high density heterogeneities, there was less than 2% deviation of MCNPX results in our dose calculation and isodose distribution. In terms of speed, the code runs 200 times faster than MCNPX. In the Fast MC code which is developed in this work, it takes the system less than 2 minutes to calculate dose for 106 particles in an Intel Core 2 Duo 2.66 GHZ desktop computer. PMID:25190994

  2. Fast multichannel astronomical photometer based on silicon photo multipliers mounted at the Telescopio Nazionale Galileo

    NASA Astrophysics Data System (ADS)

    Ambrosino, Filippo; Meddi, Franco; Rossi, Corinne; Sclavi, Silvia; Nesci, Roberto; Bruni, Ivan; Ghedina, Adriano; Riverol, Luis; Di Fabrizio, Luca

    2014-07-01

    The realization of low-cost instruments with high technical performance is a goal that deserves efforts in an epoch of fast technological developments. Such instruments can be easily reproduced and therefore allow new research programs to be opened in several observatories. We realized a fast optical photometer based on the SiPM (Silicon Photo Multiplier) technology, using commercially available modules. Using low-cost components, we developed a custom electronic chain to extract the signal produced by a commercial MPPC (Multi Pixel Photon Counter) module produced by Hamamatsu Photonics to obtain sub-millisecond sampling of the light curve of astronomical sources (typically pulsars). We built a compact mechanical interface to mount the MPPC at the focal plane of the TNG (Telescopio Nazionale Galileo), using the space available for the slits of the LRS (Low Resolution Spectrograph). On February 2014 we observed the Crab pulsar with the TNG with our prototype photometer, deriving its period and the shape of its light curve, in very good agreement with the results obtained in the past with other much more expensive instruments. After the successful run at the telescope we describe here the lessons learned and the ideas that burst to optimize this instrument and make it more versatile.

  3. Autonomous celestial navigation based on Earth ultraviolet radiance and fast gradient statistic feature extraction

    NASA Astrophysics Data System (ADS)

    Lu, Shan; Zhang, Hanmo

    2016-01-01

    To meet the requirement of autonomous orbit determination, this paper proposes a fast curve fitting method based on earth ultraviolet features to obtain accurate earth vector direction, in order to achieve the high precision autonomous navigation. Firstly, combining the stable characters of earth ultraviolet radiance and the use of transmission model software of atmospheric radiation, the paper simulates earth ultraviolet radiation model on different time and chooses the proper observation band. Then the fast improved edge extracting method combined Sobel operator and local binary pattern (LBP) is utilized, which can both eliminate noises efficiently and extract earth ultraviolet limb features accurately. And earth's centroid locations on simulated images are estimated via the least square fitting method using part of the limb edges. Taken advantage of the estimated earth vector direction and earth distance, Extended Kalman Filter (EKF) is applied to realize the autonomous navigation finally. Experiment results indicate the proposed method can achieve a sub-pixel earth centroid location estimation and extremely enhance autonomous celestial navigation precision.

  4. A thermodynamically based definition of fast verses slow heating in secondary explosives

    NASA Astrophysics Data System (ADS)

    Henson, Bryan; Smilowitz, Laura

    2013-06-01

    The thermal response of energetic materials is often categorized according to the rate of heating as either fast or slow, e.g. slow cook-off. Such categorizations have most often followed some operational rationale, without a material based definition. We have spent several years demonstrating that for the energetic material octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX) a single mechanism of thermal response reproduces times to ignition independent of rate or means of heating over the entire range of thermal response. HMX is unique in that bulk melting is rarely observed in either thermal ignition or combustion. We have recently discovered a means of expressing this mechanism for HMX in a reduced form applicable to many secondary explosives. We will show that with this mechanism a natural definition of fast versus slow rates of heating emerges, related to the rate of melting, and we use this to illustrate why HMX does not exhibit melting, and why a number of other secondary explosives do, and require the two separate categories.

  5. Cygrid: A fast Cython-powered convolution-based gridding module for Python

    NASA Astrophysics Data System (ADS)

    Winkel, B.; Lenz, D.; Flöer, L.

    2016-06-01

    Context. Data gridding is a common task in astronomy and many other science disciplines. It refers to the resampling of irregularly sampled data to a regular grid. Aims: We present cygrid, a library module for the general purpose programming language Python. Cygrid can be used to resample data to any collection of target coordinates, although its typical application involves FITS maps or data cubes. The FITS world coordinate system standard is supported. Methods: The regridding algorithm is based on the convolution of the original samples with a kernel of arbitrary shape. We introduce a lookup table scheme that allows us to parallelize the gridding and combine it with the HEALPix tessellation of the sphere for fast neighbor searches. Results: We show that for n input data points, cygrids runtime scales between O(n) and O(nlog n) and analyze the performance gain that is achieved using multiple CPU cores. We also compare the gridding speed with other techniques, such as nearest-neighbor, and linear and cubic spline interpolation. Conclusions: Cygrid is a very fast and versatile gridding library that significantly outperforms other third-party Python modules, such as the linear and cubic spline interpolation provided by SciPy. http://https://github.com/bwinkel/cygrid

  6. A fast continuous magnetic field measurement system based on digital signal processors

    SciTech Connect

    Velev, G.V.; Carcagno, R.; DiMarco, J.; Kotelnikov, S.; Lamm, M.; Makulski, A.; Maroussov, V.; Nehring, R.; Nogiec, J.; Orris, D.; Poukhov, O.; Prakoshyn, F.; Schlabach, P.; Tompkins, J.C.; /Fermilab

    2005-09-01

    In order to study dynamic effects in accelerator magnets, such as the decay of the magnetic field during the dwell at injection and the rapid so-called ''snapback'' during the first few seconds of the resumption of the energy ramp, a fast continuous harmonics measurement system was required. A new magnetic field measurement system, based on the use of digital signal processors (DSP) and Analog to Digital (A/D) converters, was developed and prototyped at Fermilab. This system uses Pentek 6102 16 bit A/D converters and the Pentek 4288 DSP board with the SHARC ADSP-2106 family digital signal processor. It was designed to acquire multiple channels of data with a wide dynamic range of input signals, which are typically generated by a rotating coil probe. Data acquisition is performed under a RTOS, whereas processing and visualization are performed under a host computer. Firmware code was developed for the DSP to perform fast continuous readout of the A/D FIFO memory and integration over specified intervals, synchronized to the probe's rotation in the magnetic field. C, C++ and Java code was written to control the data acquisition devices and to process a continuous stream of data. The paper summarizes the characteristics of the system and presents the results of initial tests and measurements.

  7. Understanding and eliminating the fast creep problem in Fe-based superconductors

    NASA Astrophysics Data System (ADS)

    Civale, Leonardo; Eley, Serena; Maiorov, Boris; Miura, Masashi

    One surprising characteristic of Fe-based superconductors is that they exhibit flux creep rates (S) as large as, or larger than, those found in oxide high temperature superconductors (HTS). This very fast vortex dynamics appears to be inconsistent with the estimate of the influence of the thermal fluctuations as quantified by the Ginzburg number (Gi), which measures the ratio of the thermal energy to the condensation energy in an elemental superconducting volume. In particular, compounds of the AFe2As2 family (``122'') have Gi ~10-5 to 10-4, so S could be expected to lie between that of low Tc materials (where typically Gi ~ 10-8) and HTS such as YBa2Cu3O7 (Gi ~ 10-2) , as indeed occurs in other superconductors with intermediate fluctuations, such as MgB2 (Gi ~10-6 to 10-4) . We have found the solution to this puzzle: the fast creep rates in 122 compounds are due to non-optimized pinning landscapes. Initial evidence comes from our previous studies showing that the introduction of additional disorder by irradiation decreases creep significantly in 122 single crystals, although still remaining well above the ideal limit. We now have new evidence from 122 thin films demonstrating that S can be reduced to the lower limit set by Gi by appropriate engineering of the pinning landscape.

  8. Surface processing technique based on opto-hydrodynamic phenomena occurring in laser-induced breakdown of a microdroplet

    NASA Astrophysics Data System (ADS)

    Ahn, Daehwan; Jang, Deoksuk; Choi, Tae-Youl; Kim, Dongsik

    2012-03-01

    We report the development of a surface processing technique based on the optical breakdown of a microdroplet and subsequent ejection of a pulsed microjet. The microjet was sufficiently fast to remove nanoparticles from surfaces and erode most materials. The small volume of the droplet enabled precise and selective treatment of surfaces. When the jet was impinged onto a laser spot focused by the droplet, ablation rates substantially larger than those in conventional pulsed laser ablation were obtained with significantly reduced thermal effects. The jet could remove 20 nm particles and an oxide layer from solid surfaces by hydrodynamic impact only.

  9. Surface characterization based on optical phase shifting interferometry

    DOEpatents

    Mello, Michael , Rosakis; Ares J.

    2011-08-02

    Apparatus, techniques and systems for implementing an optical interferometer to measure surfaces, including mapping of instantaneous curvature or in-plane and out-of-plane displacement field gradients of a sample surface based on obtaining and processing four optical interferograms from a common optical reflected beam from the sample surface that are relatively separated in phase by .pi./2.

  10. APPLICATION OF HYDROPHILIC STARCH-BASED COATINGS TO POLYETHYLNE SURFACES

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Methods for imparting hydrophilic surface properties to hydrophobic plastics are of interest because of their ability to retard the build-up of static electricity, to alter friction and adhesion properties between surfaces, to allow surfaces to be printed with water-based dyes and inks, and to impro...

  11. Locked nucleic acid based beacons for surface interaction studies and biosensor development

    PubMed Central

    Martinez, Karen; Estevez, M.-Carmen; Wu, Yanrong; Phillips, Joseph A.; Medley, Colin D.; Tan, Weihong

    2011-01-01

    DNA sensors and microarrays permit fast, simple and real-time detection of nucleic acids through the design and use of increasingly sensitive, selective and robust molecular probes. Specifically, molecular beacons (MBs) have been employed for this purpose; however, their potential in the development of solid-surface-based biosensors has not been fully realized. This is mainly a consequence of the beacon’s poor stability due to the hairpin structure once immobilized onto a solid surface, commonly resulting in a low signal enhancement. Here, we report the design of a new MB that overcomes some of the limitations of MBs for surface immobilization. Essentially, this new design adds locked nucleic acid bases (LNAs) to the beacon structure, resulting in a LNA molecular beacon (LMB) with robust stability after surface immobilization. To test the efficacy of LMBs against that of regular molecular beacons (RMBs), the properties of selectivity, sensitivity, thermal stability, hybridization kinetics and robustness for the detection of target sequences were compared and evaluated. A 25-fold enhancement was achieved for the LMB on surface with detection limits reaching the low nanomolar range. In addition, the LMB-based biosensor was shown to possess better stability, reproducibility, selectivity and robustness when compared to the RMB. Therefore, as an alternative to conventional DNA and as a prospective tool for use in both DNA microarrays and biosensors, these results demonstrate the potential of the locked nucleic acid bases for nucleic acid design for surface immobilization. PMID:19351140

  12. Influence of surface emission processes on a fast-pulsed dielectric barrier discharge in air at atmospheric pressure

    NASA Astrophysics Data System (ADS)

    Pechereau, François; Bonaventura, Zdeněk; Bourdon, Anne

    2016-08-01

    This paper presents simulations of an atmospheric pressure air discharge in a point-to-plane geometry with a dielectric layer parallel to the cathode plane. Experimentally, a discharge reignition in the air gap below the dielectrics has been observed. With a 2D fluid model, it is shown that due to the fast rise of the high voltage applied and the sharp point used, a first positive spherical discharge forms around the point. Then this discharge propagates axially and impacts the dielectrics. As the first discharge starts spreading on the upper dielectric surface, in the second air gap with a low preionization density of {{10}4}~\\text{c}{{\\text{m}}-3} , the 2D fluid model predicts a rapid reignition of a positive discharge. As in experiments, the discharge reignition is much slower, a discussion on physical processes to be considered in the model to increase the reignition delay is presented. The limit case with no initial seed charges in the second air gap has been studied. First, we have calculated the time to release an electron from the cathode surface by thermionic and field emission processes for a work function φ \\in ≤ft[3,4\\right] eV and an amplification factor β \\in ≤ft[100,220\\right] . Then a 3D Monte Carlo model has been used to follow the dynamics of formation of an avalanche starting from a single electron emitted at the cathode. Due to the high electric field in the second air gap, we have shown that in a few nanoseconds, a Gaussian cloud of seed charges is formed at a small distance from the cathode plane. This Gaussian cloud has been used as the initial condition of the 2D fluid model in the second air gap. In this case, the propagation of a double headed discharge in the second air gap has been observed and the reignition delay is in rather good agreement with experiments.

  13. An optimized fast image resizing method based on content-aware

    NASA Astrophysics Data System (ADS)

    Lu, Yan; Gao, Kun; Wang, Kewang; Xu, Tingfa

    2014-11-01

    In traditional image resizing theory based on interpolation, the prominent object may cause distortion, and the image resizing method based on content-aware has become a research focus in image processing because the prominent content and structural features of images are considered in this method. In this paper, we present an optimized fast image resizing method based on content-aware. Firstly, an appropriate energy function model is constructed on the basis of image meshes, and multiple energy constraint templates are established. In addition, this paper deducts the image saliency constraints, and then the problem of image resizing is used to reformulate a kind of convex quadratic program task. Secondly, a method based on neural network is presented in solving the problem of convex quadratic program. The corresponding neural network model is constructed; moreover, some sufficient conditions of the neural network stability are given. Compared with the traditional numerical algorithm such as iterative method, the neural network method is essentially parallel and distributed, which can expedite the calculation speed. Finally, the effects of image resizing by the proposed method and traditional image resizing method based on interpolation are compared by adopting MATLAB software. Experiment results show that this method has a higher performance of identifying the prominent object, and the prominent features can be preserved effectively after the image is resized. It also has the advantages of high portability and good real-time performance with low visual distortion.

  14. A Fast Density-Based Clustering Algorithm for Real-Time Internet of Things Stream

    PubMed Central

    Ying Wah, Teh

    2014-01-01

    Data streams are continuously generated over time from Internet of Things (IoT) devices. The faster all of this data is analyzed, its hidden trends and patterns discovered, and new strategies created, the faster action can be taken, creating greater value for organizations. Density-based method is a prominent class in clustering data streams. It has the ability to detect arbitrary shape clusters, to handle outlier, and it does not need the number of clusters in advance. Therefore, density-based clustering algorithm is a proper choice for clustering IoT streams. Recently, several density-based algorithms have been proposed for clustering data streams. However, density-based clustering in limited time is still a challenging issue. In this paper, we propose a density-based clustering algorithm for IoT streams. The method has fast processing time to be applicable in real-time application of IoT devices. Experimental results show that the proposed approach obtains high quality results with low computation time on real and synthetic datasets. PMID:25110753

  15. A fast density-based clustering algorithm for real-time Internet of Things stream.

    PubMed

    Amini, Amineh; Saboohi, Hadi; Wah, Teh Ying; Herawan, Tutut

    2014-01-01

    Data streams are continuously generated over time from Internet of Things (IoT) devices. The faster all of this data is analyzed, its hidden trends and patterns discovered, and new strategies created, the faster action can be taken, creating greater value for organizations. Density-based method is a prominent class in clustering data streams. It has the ability to detect arbitrary shape clusters, to handle outlier, and it does not need the number of clusters in advance. Therefore, density-based clustering algorithm is a proper choice for clustering IoT streams. Recently, several density-based algorithms have been proposed for clustering data streams. However, density-based clustering in limited time is still a challenging issue. In this paper, we propose a density-based clustering algorithm for IoT streams. The method has fast processing time to be applicable in real-time application of IoT devices. Experimental results show that the proposed approach obtains high quality results with low computation time on real and synthetic datasets. PMID:25110753

  16. PCM-Based Durable Write Cache for Fast Disk I/O

    SciTech Connect

    Liu, Zhuo; Wang, Bin; Carpenter, Patrick; Li, Dong; Vetter, Jeffrey S; Yu, Weikuan

    2012-01-01

    Flash based solid-state devices (FSSDs) have been adopted within the memory hierarchy to improve the performance of hard disk drive (HDD) based storage system. However, with the fast development of storage-class memories, new storage technologies with better performance and higher write endurance than FSSDs are emerging, e.g., phase-change memory (PCM). Understanding how to leverage these state-of-the-art storage technologies for modern computing systems is important to solve challenging data intensive computing problems. In this paper, we propose to leverage PCM for a hybrid PCM-HDD storage architecture. We identify the limitations of traditional LRU caching algorithms for PCM-based caches, and develop a novel hash-based write caching scheme called HALO to improve random write performance of hard disks. To address the limited durability of PCM devices and solve the degraded spatial locality in traditional wear-leveling techniques, we further propose novel PCM management algorithms that provide effective wear-leveling while maximizing access parallelism. We have evaluated this PCM-based hybrid storage architecture using applications with a diverse set of I/O access patterns. Our experimental results demonstrate that the HALO caching scheme leads to an average reduction of 36.8% in execution time compared to the LRU caching scheme, and that the SFC wear leveling extends the lifetime of PCM by a factor of 21.6.

  17. DAN instrument for NASA`s MSL mission: fast science data processing and instrument commanding for Mars surface operations and for field tests

    NASA Astrophysics Data System (ADS)

    Vostrukhin, A.; Kozyrev, A.; Litvak, M.; Malakhov, A.; Mitrofanov, I.; Mokrousov, M.; Sanin, A.; Tretyakov, V.

    2009-04-01

    The Dynamic Albedo of Neutrons (DAN) instrument is contributed by Russian Space Agency to NASA for Mars Science Laboratory mission which was originally scheduled for 2009 and now is shifted to 2011. The design of DAN instrument is partially inherited from HEND instrument for NASA's Mars Odyssey, which now successfully operates providing global mapping of martian neutron albedo, searching the distribution of martian water and observing the martian seasonal cycles. DAN is specially designed as an active neutron instrument for surface operations onboard mobile platforms. It is able to focus science investigations on local surface area around rover with horizontal resolution about 1 meter and vertical penetration about 0.5 m. The primary goal of DAN is the exploration of the hydrogen content of the bulk Martian subsurface material. This data will be used to estimate the content of chemically bound water in the hydrated minerals. The concept of DAN operations is based on combination of neutron activation analysis and neutron well logging tequnique, which are commonly used in the Earth geological applications. DAN consists blocks of Detectors and Electronics (DE) and Pulse Neutron Generator (PNG). The last one is used to irradiate the martian subsurface by pulses of 14MeV neutrons with changeable frequency up to 10 Hz. The first one detects post-pulse afterglow of neutrons, as they were thermalized down to epithermal and thermal energies within the martian subsurface. The result of detections are so called die away curves of neutrons afterglow, which show flux and time profile of thermalized neutrons and bring to us the observational signature of layering structure of martian regolith in part of depth distribution of Hydrogen (most effective element for thermalization of neutrons). In this study we focus on the development, verification and validation of DAN fast data processing and commanding. It is necessary to perform deconvolution from counting statistic in DAN

  18. Nanoparticle-based etching of silicon surfaces

    SciTech Connect

    Branz, Howard; Duda, Anna; Ginley, David S.; Yost, Vernon; Meier, Daniel; Ward, James S.

    2011-12-13

    A method (300) of texturing silicon surfaces (116) such to reduce reflectivity of a silicon wafer (110) for use in solar cells. The method (300) includes filling (330, 340) a vessel (122) with a volume of an etching solution (124) so as to cover the silicon surface 116) of a wafer or substrate (112). The etching solution (124) is made up of a catalytic nanomaterial (140) and an oxidant-etchant solution (146). The catalytic nanomaterial (140) may include gold or silver nanoparticles or noble metal nanoparticles, each of which may be a colloidal solution. The oxidant-etchant solution (146) includes an etching agent (142), such as hydrofluoric acid, and an oxidizing agent (144), such as hydrogen peroxide. Etching (350) is performed for a period of time including agitating or stirring the etching solution (124). The etch time may be selected such that the etched silicon surface (116) has a reflectivity of less than about 15 percent such as 1 to 10 percent in a 350 to 1000 nanometer wavelength range.

  19. Ferroelectric based catalysis: Switchable surface chemistry

    NASA Astrophysics Data System (ADS)

    Kakekhani, Arvin; Ismail-Beigi, Sohrab

    2015-03-01

    We describe a new class of catalysts that uses an epitaxial monolayer of a transition metal oxide on a ferroelectric substrate. The ferroelectric polarization switches the surface chemistry between strongly adsorptive and strongly desorptive regimes, circumventing difficulties encountered on non-switchable catalytic surfaces where the Sabatier principle dictates a moderate surface-molecule interaction strength. This method is general and can, in principle, be applied to many reactions, and for each case the choice of the transition oxide monolayer can be optimized. Here, as a specific example, we show how simultaneous NOx direct decomposition (into N2 and O2) and CO oxidation can be achieved efficiently on CrO2 terminated PbTiO3, while circumventing oxygen (and sulfur) poisoning issues. One should note that NOx direct decomposition has been an open challenge in automotive emission control industry. Our method can expand the range of catalytically active elements to those which are not conventionally considered for catalysis and which are more economical, e.g., Cr (for NOx direct decomposition and CO oxidation) instead of canonical precious metal catalysts. Primary support from Toyota Motor Engineering and Manufacturing, North America, Inc.

  20. Fast fabrication of super-hydrophobic surfaces on polypropylene by replication of short-pulse laser structured molds

    NASA Astrophysics Data System (ADS)

    Bekesi, J.; Kaakkunen, J. J. J.; Michaeli, W.; Klaiber, F.; Schoengart, M.; Ihlemann, J.; Simon, P.

    2010-06-01

    A new two-step method, facilitating the rapid generation of super-hydrophobic surface structures via parallel laser processing followed by a replica generation by injection molding is reported. A self-made fused silica-based diffractive optical element (DOE) is applied to distribute the laser energy into a 25×25 dot matrix. This DOE is used as a transmission mask for surface ablation of metal molds, applying short-pulse UV laser pulses. In a subsequent process step, replicas of the processed stamp are produced by variothermal injection molding, enabling the mass production of the surface pattern on plastics parts. The resulting topography facilitates a super-hydrophobic behavior of the fabricated components.

  1. Ricci Flow-based Spherical Parameterization and Surface Registration.

    PubMed

    Chen, X; He, H; Zou, G; Zhang, X; Gu, X; Hua, J

    2013-09-01

    This paper presents an improved Euclidean Ricci flow method for spherical parameterization. We subsequently invent a scale space processing built upon Ricci energy to extract robust surface features for accurate surface registration. Since our method is based on the proposed Euclidean Ricci flow, it inherits the properties of Ricci flow such as conformality, robustness and intrinsicalness, facilitating efficient and effective surface mapping. Compared with other surface registration methods using curvature or sulci pattern, our method demonstrates a significant improvement for surface registration. In addition, Ricci energy can capture local differences for surface analysis as shown in the experiments and applications. PMID:24019739

  2. Ion Beam Analysis Of Silicon-Based Surfaces And Correlation With Surface Energy Measurements

    NASA Astrophysics Data System (ADS)

    Xing, Qian; Herbots, N.; Hart, M.; Bradley, J. D.; Wilkens, B. J.; Sell, D. A.; Sell, Clive H.; Kwong, Henry Mark; Culbertson, R. J.; Whaley, S. D.

    2011-06-01

    The water affinity of Si-based surfaces is quantified by contact angle measurement and surface free energy to explain hydrophobic or hydrophilic behavior of silicone, silicates, and silicon surfaces. Surface defects such as dangling bonds, surface free energy including Lewis acid-base and Lifshitz-van der Waals components are discussed. Water nucleation and condensation is further explained by surface topography. Tapping mode atomic force microscopy (TMAFM) provides statistical analysis of the topography of these Si-based surfaces. The correlation of the above two characteristics describes the behavior of water condensation at Si-based surfaces. Surface root mean square roughness increasing from several Å to several nm is found to provide nucleation sites that expedite water condensation visibly for silica and silicone. Hydrophilic surfaces have a condensation pattern that forms puddles of water while hydrophobic surfaces form water beads. Polymer adsorption on these surfaces alters the water affinity as well as the surface topography, and therefore controls condensation on Si-based surfaces including silicone intraocular lens (IOL). The polymer film is characterized by Rutherford backscattering spectrometry (RBS) in conjunction with 4.265 MeV 12C(α, α)12C, 3.045 MeV 16O(α,α)16O nuclear resonance scattering (NRS), and 2.8 MeV elastic recoil detection (ERD) of hydrogen for high resolution composition and areal density measurements. The areal density of hydroxypropyl methylcellulose (HPMC) film ranges from 1018 atom/cm2 to 1019 atom/cm2 gives the silica or silicone surface a roughness of several Å and a wavelength of 0.16±0.02 μm, and prevents fogging by forming a complete wetting layer during water condensation.

  3. Ion Beam Analysis Of Silicon-Based Surfaces And Correlation With Surface Energy Measurements

    SciTech Connect

    Xing Qian; Herbots, N.; Hart, M.; Bradley, J. D.; Wilkens, B. J.; Sell, D. A.; Culbertson, R. J.; Whaley, S. D.; Sell, Clive H.; Kwong, Henry Mark Jr.

    2011-06-01

    The water affinity of Si-based surfaces is quantified by contact angle measurement and surface free energy to explain hydrophobic or hydrophilic behavior of silicone, silicates, and silicon surfaces. Surface defects such as dangling bonds, surface free energy including Lewis acid-base and Lifshitz-van der Waals components are discussed. Water nucleation and condensation is further explained by surface topography. Tapping mode atomic force microscopy (TMAFM) provides statistical analysis of the topography of these Si-based surfaces. The correlation of the above two characteristics describes the behavior of water condensation at Si-based surfaces. Surface root mean square roughness increasing from several A ring to several nm is found to provide nucleation sites that expedite water condensation visibly for silica and silicone. Hydrophilic surfaces have a condensation pattern that forms puddles of water while hydrophobic surfaces form water beads. Polymer adsorption on these surfaces alters the water affinity as well as the surface topography, and therefore controls condensation on Si-based surfaces including silicone intraocular lens (IOL). The polymer film is characterized by Rutherford backscattering spectrometry (RBS) in conjunction with 4.265 MeV {sup 12}C({alpha}, {alpha}){sup 12}C, 3.045 MeV {sup 16}O({alpha},{alpha}){sup 16}O nuclear resonance scattering (NRS), and 2.8 MeV elastic recoil detection (ERD) of hydrogen for high resolution composition and areal density measurements. The areal density of hydroxypropyl methylcellulose (HPMC) film ranges from 10{sup 18} atom/cm{sup 2} to 10{sup 19} atom/cm{sup 2} gives the silica or silicone surface a roughness of several A ring and a wavelength of 0.16{+-}0.02 {mu}m, and prevents fogging by forming a complete wetting layer during water condensation.

  4. Wavelet-based fast time-resolved magnetic sensing with electronic spins in diamond

    NASA Astrophysics Data System (ADS)

    Xu, Nanyang; Jiang, Fengjian; Tian, Yu; Ye, Jianfeng; Shi, Fazhan; Lv, Haijiang; Wang, Ya; Wrachtrup, Jörg; Du, Jiangfeng

    2016-04-01

    Time-resolved magnetic sensing is of great importance from fundamental studies to applications in physical and biological sciences. Recently, the nitrogen-vacancy defect center in diamond has been developed as a promising sensor of magnetic fields under ambient conditions. However, methods to reconstruct time-resolved magnetic fields with high sensitivity are not yet fully developed. Here, we propose and demonstrate a sensing method based on spin echo and Haar wavelet transformation. Our method is exponentially faster in reconstructing time-resolved magnetic fields with comparable sensitivity than existing methods. It is also easier to implement in experiments. Furthermore, the wavelet's unique features enable our method to extract information from the whole signal with only part of the measuring sequences. We then explore this feature for a fast detection of simulated nerve impulses. These results will be useful to time-resolved magnetic sensing with quantum probes at nanoscale.

  5. Fast approach to infrared image restoration based on shrinkage functions calibration

    NASA Astrophysics Data System (ADS)

    Zhang, Chengshuo; Shi, Zelin; Xu, Baoshu; Feng, Bin

    2016-05-01

    High-quality image restoration in real time is a challenge for infrared imaging systems. We present a fast approach to infrared image restoration based on shrinkage functions calibration. Rather than directly modeling the prior of sharp images to obtain the shrinkage functions, we calibrate them for restoration directly by using the acquirable sharp and blurred image pairs from the same infrared imaging system. The calibration method is employed to minimize the sum of squared errors between sharp images and restored images from the blurred images. Our restoration algorithm is noniterative and its shrinkage functions are stored in the look-up tables, so an architecture solution of pipeline structure can work in real time. We demonstrate the effectiveness of our approach by testing its quantitative performance from simulation experiments and its qualitative performance from a developed wavefront coding infrared imaging system.

  6. A fast image retrieval method based on SVM and imbalanced samples in filtering multimedia message spam

    NASA Astrophysics Data System (ADS)

    Chen, Zhang; Peng, Zhenming; Peng, Lingbing; Liao, Dongyi; He, Xin

    2011-11-01

    With the swift and violent development of the Multimedia Messaging Service (MMS), it becomes an urgent task to filter the Multimedia Message (MM) spam effectively in real-time. For the fact that most MMs contain images or videos, a method based on retrieving images is given in this paper for filtering MM spam. The detection method used in this paper is a combination of skin-color detection, texture detection, and face detection, and the classifier for this imbalanced problem is a very fast multi-classification combining Support vector machine (SVM) with unilateral binary decision tree. The experiments on 3 test sets show that the proposed method is effective, with the interception rate up to 60% and the average detection time for each image less than 1 second.

  7. Nanowire humidity optical sensor system based on fast Fourier transform technique

    NASA Astrophysics Data System (ADS)

    Rota-Rodrigo, S.; Pérez-Herrera, R.; Lopez-Aldaba, A.; López Bautista, M. C.; Esteban, O.; López-Amo, M.

    2015-09-01

    In this paper, a new sensor system for relative humidity measurements based on its interaction with the evanescent field of a nanowire is presented. The interrogation of the sensing head is carried out by monitoring the fast Fourier transform phase variations of one of the nanowire interference frequencies. This method is independent of the signal amplitude and also avoids the necessity of tracking the wavelength evolution in the spectrum, which can be a handicap when there are multiple interference frequency components with different sensitivities. The sensor is operated within a wide humidity range (20%-70% relative humidity) with a maximum sensitivity achieved of 0.14rad/% relative humidity. Finally, due to the system uses an optical interrogator as unique active element, the system presents a cost-effective feature.

  8. Fast Restoration Based on Alternative Wavelength Paths in a Wide Area Optical IP Network

    NASA Astrophysics Data System (ADS)

    Matera, Francesco; Rea, Luca; Venezia, Matteo; Capanna, Lorenzo; Del Prete, Giuseppe

    In this article we describe an experimental investigation of IP network restoration based on wavelength recovery. We propose a procedure for metro and wide area gigabit Ethernet networks that allows us to route the wavelength in case of link failure to another existing link by exploiting wavelength division multiplexing in the fiber. Such a procedure is obtained by means of an optical switch that is managed by a loss-of-light signal that is generated by a router in case of link failure. Such a method has been tested in an IP network consisting of three core routers with optical gigabit Ethernet interfaces connected by means of 50-km-long single-mode fibers between Rome and Pomezia. Compared with other conventional restoration techniques, such as OSPF and MPLS, our method -in very fast (20 ms) and is compatible with real-time TV services and low-cost chips.

  9. Proton linac for hospital-based fast neutron therapy and radioisotope production

    SciTech Connect

    Lennox, A.J.; Hendrickson, F.R.; Swenson, D.A.; Winje, R.A.; Young, D.E.; Rush Univ., Chicago, IL; Science Applications International Corp., Princeton, NJ; Fermi National Accelerator Lab., Batavia, IL )

    1989-09-01

    Recent developments in linac technology have led to the design of a hospital-based proton linac for fast neutron therapy. The 180 microamp average current allows beam to be diverted for radioisotope production during treatments while maintaining an acceptable dose rate. During dedicated operation, dose rates greater than 280 neutron rads per minute are achievable at depth, DMAX = 1.6 cm with source to axis distance, SAD = 190 cm. Maximum machine energy is 70 MeV and several intermediate energies are available for optimizing production of isotopes for Positron Emission Tomography and other medical applications. The linac can be used to produce a horizontal or a gantry can be added to the downstream end of the linac for conventional patient positioning. The 70 MeV protons can also be used for proton therapy for ocular melanomas. 17 refs., 1 fig., 1 tab.

  10. Melting of iron at Earth's inner core boundary based on fast X-ray diffraction.

    PubMed

    Anzellini, S; Dewaele, A; Mezouar, M; Loubeyre, P; Morard, G

    2013-04-26

    Earth's core is structured in a solid inner core, mainly composed of iron, and a liquid outer core. The temperature at the inner core boundary is expected to be close to the melting point of iron at 330 gigapascal (GPa). Despite intensive experimental and theoretical efforts, there is little consensus on the melting behavior of iron at these extreme pressures and temperatures. We present static laser-heated diamond anvil cell experiments up to 200 GPa using synchrotron-based fast x-ray diffraction as a primary melting diagnostic. When extrapolating to higher pressures, we conclude that the melting temperature of iron at the inner core boundary is 6230 ± 500 kelvin. This estimation favors a high heat flux at the core-mantle boundary with a possible partial melting of the mantle. PMID:23620049

  11. Fast residential area extraction from remote sensing image based on Log-Gabor filter

    NASA Astrophysics Data System (ADS)

    Xiao, Jie; Cai, Chao

    2011-11-01

    Monitoring urbanization may help government agencies and urban region planners in updating land maps and forming long-term plans accordingly. In this paper, a novel method for fast extracting residential area from remote sensing images based on log-Gabor filter was proposed. The method is divided in three steps. Firstly, we detect the edge-oriented urban characteristics in a remote sensing image using log-Gabor filter. Secondly, with the filtering orientations perpendicular to each other, we choose two log-Gabor filter response images to suppress the noise and acquire a smooth spatial region. Thirdly, a set of smooth regions served as residential areas can be extracted using Otsu's method. We tested it on diverse aerial and satellite images and encouraging results were acquired. The comparison of our method with the classical texture analyzing method of co-occurrence matrix demonstrated its superiority.

  12. Fast prediction unit selection method for HEVC intra prediction based on salient regions

    NASA Astrophysics Data System (ADS)

    Feng, Lei; Dai, Ming; Zhao, Chun-lei; Xiong, Jing-ying

    2016-07-01

    In order to reduce the computational complexity of the high efficiency video coding (HEVC) standard, a new algorithm for HEVC intra prediction, namely, fast prediction unit (PU) size selection method for HEVC based on salient regions is proposed in this paper. We first build a saliency map for each largest coding unit (LCU) to reduce its texture complexity. Secondly, the optimal PU size is determined via a scheme that implements an information entropy comparison among sub-blocks of saliency maps. Finally, we apply the partitioning result of saliency map on the original LCUs, obtaining the optimal partitioning result. Our algorithm can determine the PU size in advance to the angular prediction in intra coding, reducing computational complexity of HEVC. The experimental results show that our algorithm achieves a 37.9% reduction in encoding time, while producing a negligible loss in Bjontegaard delta bit rate ( BDBR) of 0.62%.

  13. A robust and fast line segment detector based on top-down smaller eigenvalue analysis

    NASA Astrophysics Data System (ADS)

    Liu, Dong; Wang, Yongtao; Tang, Zhi; Lu, Xiaoqing

    2014-01-01

    In this paper, we propose a robust and fast line segment detector, which achieves accurate results with a controlled number of false detections and requires no parameter tuning. It consists of three steps: first, we propose a novel edge point chaining method to extract Canny edge segments (i.e., contiguous chains of Canny edge points) from the input image; second, we propose a top-down scheme based on smaller eigenvalue analysis to extract line segments within each obtained edge segment; third, we employ Desolneux et al.'s method to reject false detections. Experiments demonstrate that it is very efficient and more robust than two state of the art methods—LSD and EDLines.

  14. Fault diagnosis of rolling bearing based on fast nonlocal means and envelop spectrum.

    PubMed

    Lv, Yong; Zhu, Qinglin; Yuan, Rui

    2015-01-01

    The nonlocal means (NL-Means) method that has been widely used in the field of image processing in recent years effectively overcomes the limitations of the neighborhood filter and eliminates the artifact and edge problems caused by the traditional image denoising methods. Although NL-Means is very popular in the field of 2D image signal processing, it has not received enough attention in the field of 1D signal processing. This paper proposes a novel approach that diagnoses the fault of a rolling bearing based on fast NL-Means and the envelop spectrum. The parameters of the rolling bearing signals are optimized in the proposed method, which is the key contribution of this paper. This approach is applied to the fault diagnosis of rolling bearing, and the results have shown the efficiency at detecting roller bearing failures. PMID:25585105

  15. Fault Diagnosis of Rolling Bearing Based on Fast Nonlocal Means and Envelop Spectrum

    PubMed Central

    Lv, Yong; Zhu, Qinglin; Yuan, Rui

    2015-01-01

    The nonlocal means (NL-Means) method that has been widely used in the field of image processing in recent years effectively overcomes the limitations of the neighborhood filter and eliminates the artifact and edge problems caused by the traditional image denoising methods. Although NL-Means is very popular in the field of 2D image signal processing, it has not received enough attention in the field of 1D signal processing. This paper proposes a novel approach that diagnoses the fault of a rolling bearing based on fast NL-Means and the envelop spectrum. The parameters of the rolling bearing signals are optimized in the proposed method, which is the key contribution of this paper. This approach is applied to the fault diagnosis of rolling bearing, and the results have shown the efficiency at detecting roller bearing failures. PMID:25585105

  16. Two-dimensional electronic spectroscopy based on conventional optics and fast dual chopper data acquisition

    SciTech Connect

    Heisler, Ismael A. Moca, Roberta; Meech, Stephen R.; Camargo, Franco V. A.

    2014-06-15

    We report an improved experimental scheme for two-dimensional electronic spectroscopy (2D-ES) based solely on conventional optical components and fast data acquisition. This is accomplished by working with two choppers synchronized to a 10 kHz repetition rate amplified laser system. We demonstrate how scattering and pump-probe contributions can be removed during 2D measurements and how the pump probe and local oscillator spectra can be generated and saved simultaneously with each population time measurement. As an example the 2D-ES spectra for cresyl violet were obtained. The resulting 2D spectra show a significant oscillating signal during population evolution time which can be assigned to an intramolecular vibrational mode.

  17. Fast GPU-based calculations in few-body quantum scattering

    NASA Astrophysics Data System (ADS)

    Pomerantsev, V. N.; Kukulin, V. I.; Rubtsova, O. A.; Sakhiev, S. K.

    2016-07-01

    A principally novel approach towards solving the few-particle (many-dimensional) quantum scattering problems is described. The approach is based on a complete discretization of few-particle continuum and usage of massively parallel computations of integral kernels for scattering equations by means of GPU. The discretization for continuous spectrum of few-particle Hamiltonian is realized with a projection of all scattering operators and wave functions onto the stationary wave-packet basis. Such projection procedure leads to a replacement of singular multidimensional integral equations with linear matrix ones having finite matrix elements. Different aspects of the employment of multithread GPU computing for fast calculation of the matrix kernel of the equation are studied in detail. As a result, the fully realistic three-body scattering problem above the break-up threshold is solved on an ordinary desktop PC with GPU for a rather small computational time.

  18. Multilevel fast multipole method based on a potential formulation for 3D electromagnetic scattering problems.

    PubMed

    Fall, Mandiaye; Boutami, Salim; Glière, Alain; Stout, Brian; Hazart, Jerome

    2013-06-01

    A combination of the multilevel fast multipole method (MLFMM) and boundary element method (BEM) can solve large scale photonics problems of arbitrary geometry. Here, MLFMM-BEM algorithm based on a scalar and vector potential formulation, instead of the more conventional electric and magnetic field formulations, is described. The method can deal with multiple lossy or lossless dielectric objects of arbitrary geometry, be they nested, in contact, or dispersed. Several examples are used to demonstrate that this method is able to efficiently handle 3D photonic scatterers involving large numbers of unknowns. Absorption, scattering, and extinction efficiencies of gold nanoparticle spheres, calculated by the MLFMM, are compared with Mie's theory. MLFMM calculations of the bistatic radar cross section (RCS) of a gold sphere near the plasmon resonance and of a silica coated gold sphere are also compared with Mie theory predictions. Finally, the bistatic RCS of a nanoparticle gold-silver heterodimer calculated with MLFMM is compared with unmodified BEM calculations. PMID:24323115

  19. Global mean sea surface based upon SEASAT altimeter data

    NASA Technical Reports Server (NTRS)

    Marsh, J. G.

    1984-01-01

    A global mean sea surface based upon the SEASAT altimeter data was derived. A combination of crossing arc techniques, accurate SEASAT reference orbits, and a previously computed GOES-3/SEASAT mean sea surface were used in the computation process. This mean sea surface provides a basis for the determination of global ocean circulation patterns and for detailed analysis of the Earth's internal structure. A contour map of the global mean sea surface is presented.

  20. Fast GPU-based absolute intensity determination for energy-dispersive X-ray Laue diffraction

    NASA Astrophysics Data System (ADS)

    Alghabi, F.; Send, S.; Schipper, U.; Abboud, A.; Pietsch, U.; Kolb, A.

    2016-01-01

    This paper presents a novel method for fast determination of absolute intensities in the sites of Laue spots generated by a tetragonal hen egg-white lysozyme crystal after exposure to white synchrotron radiation during an energy-dispersive X-ray Laue diffraction experiment. The Laue spots are taken by means of an energy-dispersive X-ray 2D pnCCD detector. Current pnCCD detectors have a spatial resolution of 384 × 384 pixels of size 75 × 75 μm2 each and operate at a maximum of 400 Hz. Future devices are going to have higher spatial resolution and frame rates. The proposed method runs on a computer equipped with multiple Graphics Processing Units (GPUs) which provide fast and parallel processing capabilities. Accordingly, our GPU-based algorithm exploits these capabilities to further analyse the Laue spots of the sample. The main contribution of the paper is therefore an alternative algorithm for determining absolute intensities of Laue spots which are themselves computed from a sequence of pnCCD frames. Moreover, a new method for integrating spectral peak intensities and improved background correction, a different way of calculating mean count rate of the background signal and also a new method for n-dimensional Poisson fitting are presented.We present a comparison of the quality of results from the GPU-based algorithm with the quality of results from a prior (base) algorithm running on CPU. This comparison shows that our algorithm is able to produce results with at least the same quality as the base algorithm. Furthermore, the GPU-based algorithm is able to speed up one of the most time-consuming parts of the base algorithm, which is n-dimensional Poisson fitting, by a factor of more than 3. Also, the entire procedure of extracting Laue spots' positions, energies and absolute intensities from a raw dataset of pnCCD frames is accelerated by a factor of more than 3.

  1. Fast randomized Hough transformation track initiation algorithm based on multi-scale clustering

    NASA Astrophysics Data System (ADS)

    Wan, Minjie; Gu, Guohua; Chen, Qian; Qian, Weixian; Wang, Pengcheng

    2015-10-01

    A fast randomized Hough transformation track initiation algorithm based on multi-scale clustering is proposed to overcome existing problems in traditional infrared search and track system(IRST) which cannot provide movement information of the initial target and select the threshold value of correlation automatically by a two-dimensional track association algorithm based on bearing-only information . Movements of all the targets are presumed to be uniform rectilinear motion throughout this new algorithm. Concepts of space random sampling, parameter space dynamic linking table and convergent mapping of image to parameter space are developed on the basis of fast randomized Hough transformation. Considering the phenomenon of peak value clustering due to shortcomings of peak detection itself which is built on threshold value method, accuracy can only be ensured on condition that parameter space has an obvious peak value. A multi-scale idea is added to the above-mentioned algorithm. Firstly, a primary association is conducted to select several alternative tracks by a low-threshold .Then, alternative tracks are processed by multi-scale clustering methods , through which accurate numbers and parameters of tracks are figured out automatically by means of transforming scale parameters. The first three frames are processed by this algorithm in order to get the first three targets of the track , and then two slightly different gate radius are worked out , mean value of which is used to be the global threshold value of correlation. Moreover, a new model for curvilinear equation correction is applied to the above-mentioned track initiation algorithm for purpose of solving the problem of shape distortion when a space three-dimensional curve is mapped to a two-dimensional bearing-only space. Using sideways-flying, launch and landing as examples to build models and simulate, the application of the proposed approach in simulation proves its effectiveness , accuracy , and adaptivity

  2. Compressive sensing for seismic data reconstruction via fast projection onto convex sets based on seislet transform

    NASA Astrophysics Data System (ADS)

    Gan, Shuwei; Wang, Shoudong; Chen, Yangkang; Chen, Xiaohong; Huang, Weiling; Chen, Hanming

    2016-07-01

    According to the compressive sensing (CS) theory in the signal-processing field, we proposed a new CS approach based on a fast projection onto convex sets (POCS) algorithm with sparsity constraint in the seislet transform domain. The seislet transform appears to be the sparest among the state-of-the-art sparse transforms. The FPOCS can obtain much faster convergence than conventional POCS (about two thirds of conventional iterations can be saved), while maintaining the same recovery performance. The FPOCS can obtain faster and better performance than FISTA for relatively cleaner data but will get slower and worse performance than FISTA, which becomes a reference to decide which algorithm to use in practice according the noise level in the seismic data. The seislet transform based CS approach can achieve obviously better data recovery results than f - k transform based scenarios, considering both signal-to-noise ratio (SNR), local similarity comparison, and visual observation, because of a much sparser structure in the seislet transform domain. We have used both synthetic and field data examples to demonstrate the superior performance of the proposed seislet-based FPOCS approach.

  3. PRIMAL: Fast and Accurate Pedigree-based Imputation from Sequence Data in a Founder Population

    PubMed Central

    Livne, Oren E.; Han, Lide; Alkorta-Aranburu, Gorka; Wentworth-Sheilds, William; Abney, Mark; Ober, Carole; Nicolae, Dan L.

    2015-01-01

    Founder populations and large pedigrees offer many well-known advantages for genetic mapping studies, including cost-efficient study designs. Here, we describe PRIMAL (PedigRee IMputation ALgorithm), a fast and accurate pedigree-based phasing and imputation algorithm for founder populations. PRIMAL incorporates both existing and original ideas, such as a novel indexing strategy of Identity-By-Descent (IBD) segments based on clique graphs. We were able to impute the genomes of 1,317 South Dakota Hutterites, who had genome-wide genotypes for ~300,000 common single nucleotide variants (SNVs), from 98 whole genome sequences. Using a combination of pedigree-based and LD-based imputation, we were able to assign 87% of genotypes with >99% accuracy over the full range of allele frequencies. Using the IBD cliques we were also able to infer the parental origin of 83% of alleles, and genotypes of deceased recent ancestors for whom no genotype information was available. This imputed data set will enable us to better study the relative contribution of rare and common variants on human phenotypes, as well as parental origin effect of disease risk alleles in >1,000 individuals at minimal cost. PMID:25735005

  4. Navigating the Shift to Value-Based Reimbursement: How Fast Is Too Fast, and How Slow Is Too Slow?

    PubMed

    Greeter, Aimee

    2016-01-01

    Providers are struggling to understand how the macro-level changes occurring in the healthcare industry will affect them on a micro-level, especially as they pertain to the shift toward value-based reimbursement. This article presents a guide to physicians and practice administration, in both the private and hospital-employed practice setting, on how to effectively manage this shift from fee-for-volume to fee-for-value. It analyzes new reimbursement models, population health management trends, and second-generation alignment and compensation models to help the reader understand practical tactics and overarching strategies to prepare for the changing method of reimbursement in the health-care industry. The goal of this article is to provide clarity for decision-makers as they embrace the fee-for-value shift in a historically and predominantly fee-for-service environment. PMID:27443053

  5. Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator

    NASA Astrophysics Data System (ADS)

    Dong, Jing; Bi, Renzhe; Ho, Jun Hui; Thong, Patricia S. P.; Soo, Khee-Chee; Lee, Kijoon

    2012-09-01

    Diffuse correlation spectroscopy (DCS) is an emerging noninvasive technique that probes the deep tissue blood flow, by using the time-averaged intensity autocorrelation function of the fluctuating diffuse reflectance signal. We present a fast Fourier transform (FFT)-based software autocorrelator that utilizes the graphical programming language LabVIEW (National Instruments) to complete data acquisition, recording, and processing tasks. The validation and evaluation experiments were conducted on an in-house flow phantom, human forearm, and photodynamic therapy (PDT) on mouse tumors under the acquisition rate of ˜400 kHz. The software autocorrelator in general has certain advantages, such as flexibility in raw photon count data preprocessing and low cost. In addition to that, our FFT-based software autocorrelator offers smoother starting and ending plateaus when compared to a hardware correlator, which could directly benefit the fitting results without too much sacrifice in speed. We show that the blood flow index (BFI) obtained by using a software autocorrelator exhibits better linear behavior in a phantom control experiment when compared to a hardware one. The results indicate that an FFT-based software autocorrelator can be an alternative solution to the conventional hardware ones in DCS systems with considerable benefits.

  6. Diffuse correlation spectroscopy with a fast Fourier transform-based software autocorrelator.

    PubMed

    Dong, Jing; Bi, Renzhe; Ho, Jun Hui; Thong, Patricia S P; Soo, Khee-Chee; Lee, Kijoon

    2012-09-01

    Diffuse correlation spectroscopy (DCS) is an emerging noninvasive technique that probes the deep tissue blood flow, by using the time-averaged intensity autocorrelation function of the fluctuating diffuse reflectance signal. We present a fast Fourier transform (FFT)-based software autocorrelator that utilizes the graphical programming language LabVIEW (National Instruments) to complete data acquisition, recording, and processing tasks. The validation and evaluation experiments were conducted on an in-house flow phantom, human forearm, and photodynamic therapy (PDT) on mouse tumors under the acquisition rate of ∼400  kHz. The software autocorrelator in general has certain advantages, such as flexibility in raw photon count data preprocessing and low cost. In addition to that, our FFT-based software autocorrelator offers smoother starting and ending plateaus when compared to a hardware correlator, which could directly benefit the fitting results without too much sacrifice in speed. We show that the blood flow index (BFI) obtained by using a software autocorrelator exhibits better linear behavior in a phantom control experiment when compared to a hardware one. The results indicate that an FFT-based software autocorrelator can be an alternative solution to the conventional hardware ones in DCS systems with considerable benefits. PMID:23085922

  7. Cryo-EM Image Alignment Based on Nonuniform Fast Fourier Transform

    PubMed Central

    Yang, Zhengfan; Penczek, Pawel A.

    2008-01-01

    In single particle analysis, two-dimensional (2-D) alignment is a fundamental step intended to put into register various particle projections of biological macromolecules collected at the electron microscope. The efficiency and quality of three-dimensional (3-D) structure reconstruction largely depends on the computational speed and alignment accuracy of this crucial step. In order to improve the performance of alignment, we introduce a new method that takes advantage of the highly accurate interpolation scheme based on the gridding method, a version of the nonuniform Fast Fourier Transform, and utilizes a multi-dimensional optimization algorithm for the refinement of the orientation parameters. Using simulated data, we demonstrate that by using less than half of the sample points and taking twice the runtime, our new 2-D alignment method achieves dramatically better alignment accuracy than that based on quadratic interpolation. We also apply our method to image to volume registration, the key step in the single particle EM structure refinement protocol. We find that in this case the accuracy of the method not only surpasses the accuracy of the commonly used real-space implementation, but results are achieved in much shorter time, making gridding-based alignment a perfect candidate for efficient structure determination in single particle analysis. PMID:18499351

  8. Infrared image guidance for ground vehicle based on fast wavelet image focusing and tracking

    NASA Astrophysics Data System (ADS)

    Akiyama, Akira; Kobayashi, Nobuaki; Mutoh, Eiichiro; Kumagai, Hideo; Yamada, Hirofumi; Ishii, Hiromitsu

    2009-08-01

    We studied the infrared image guidance for ground vehicle based on the fast wavelet image focusing and tracking. Here we uses the image of the uncooled infrared imager mounted on the two axis gimbal system and the developed new auto focusing algorithm on the Daubechies wavelet transform. The developed new focusing algorithm on the Daubechies wavelet transform processes the result of the high pass filter effect to meet the direct detection of the objects. This new focusing gives us the distance information of the outside world smoothly, and the information of the gimbal system gives us the direction of objects in the outside world to match the sense of the spherical coordinate system. We installed this system on the hand made electric ground vehicle platform powered by 24VDC battery. The electric vehicle equips the rotary encoder units and the inertia rate sensor units to make the correct navigation process. The image tracking also uses the developed newt wavelet focusing within several image processing. The size of the hand made electric ground vehicle platform is about 1m long, 0.75m wide, 1m high, and 50kg weight. We tested the infrared image guidance for ground vehicle based on the new wavelet image focusing and tracking using the electric vehicle indoor and outdoor. The test shows the good results by the developed infrared image guidance for ground vehicle based on the new wavelet image focusing and tracking.

  9. Development of an AQUA Based Near-Surface Parameter Retrieval

    NASA Technical Reports Server (NTRS)

    Roberts, Brent; Clayson, Carol Anne

    2010-01-01

    The production of a satellite based turbulent surface flux product relies critically upon the near-surface input parameters. Development of retrieval algorithms for the necessary near-surface variables of wind speed, specific humidity, air temperature, and sea surface temperature has proceeded relatively independent of each another until recently. The use of a neural network approach using Special Sensor Microwave/Imager (SSM/I) data in conjunction with a first guess sea surface temperature has led to successful retrieval of all parameters simultaneously. However, SSM/I frequencies lack inherent sensitivity to the sea surface temperature (SST). Recent studies have found improved air temperature and humidity retrievals can be obtained via inclusion of microwave sounding channels weighted in the lower troposphere. The inclusion of SSM/I-like frequencies as well as SST-sensitive microwave channels on AMSR-E along with AMSU-A sounding data onboard the AQUA platform provides an unique opportunity. That is the ability to provide near-simultaneous (in space and time) measurements allowing the retrieval of all the near-surface variables, including SST. This study shows results of a new algorithm designed to take advantage of the unique sampling ability of AQUA based sensors. Results from a neural network based methodology will be shown as compared to in-situ based observations of near-surface variables. Implications for creation of an AQUA based turbulent surface product are also discussed.

  10. A fast algorithm for voxel-based deterministic simulation of X-ray imaging

    NASA Astrophysics Data System (ADS)

    Li, Ning; Zhao, Hua-Xia; Cho, Sang-Hyun; Choi, Jung-Gil; Kim, Myoung-Hee

    2008-04-01

    Deterministic method based on ray tracing technique is known as a powerful alternative to the Monte Carlo approach for virtual X-ray imaging. The algorithm speed is a critical issue in the perspective of simulating hundreds of images, notably to simulate tomographic acquisition or even more, to simulate X-ray radiographic video recordings. We present an algorithm for voxel-based deterministic simulation of X-ray imaging using voxel-driven forward and backward perspective projection operations and minimum bounding rectangles (MBRs). The algorithm is fast, easy to implement, and creates high-quality simulated radiographs. As a result, simulated radiographs can typically be obtained in split seconds with a simple personal computer. Program summaryProgram title: X-ray Catalogue identifier: AEAD_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEAD_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 416 257 No. of bytes in distributed program, including test data, etc.: 6 018 263 Distribution format: tar.gz Programming language: C (Visual C++) Computer: Any PC. Tested on DELL Precision 380 based on a Pentium D 3.20 GHz processor with 3.50 GB of RAM Operating system: Windows XP Classification: 14, 21.1 Nature of problem: Radiographic simulation of voxelized objects based on ray tracing technique. Solution method: The core of the simulation is a fast routine for the calculation of ray-box intersections and minimum bounding rectangles, together with voxel-driven forward and backward perspective projection operations. Restrictions: Memory constraints. There are three programs in all. A. Program for test 3.1(1): Object and detector have axis-aligned orientation; B. Program for test 3.1(2): Object in arbitrary orientation; C. Program for test 3.2: Simulation of X-ray video

  11. A Fast SVD-Hidden-nodes based Extreme Learning Machine for Large-Scale Data Analytics.

    PubMed

    Deng, Wan-Yu; Bai, Zuo; Huang, Guang-Bin; Zheng, Qing-Hua

    2016-05-01

    Big dimensional data is a growing trend that is emerging in many real world contexts, extending from web mining, gene expression analysis, protein-protein interaction to high-frequency financial data. Nowadays, there is a growing consensus that the increasing dimensionality poses impeding effects on the performances of classifiers, which is termed as the "peaking phenomenon" in the field of machine intelligence. To address the issue, dimensionality reduction is commonly employed as a preprocessing step on the Big dimensional data before building the classifiers. In this paper, we propose an Extreme Learning Machine (ELM) approach for large-scale data analytic. In contrast to existing approaches, we embed hidden nodes that are designed using singular value decomposition (SVD) into the classical ELM. These SVD nodes in the hidden layer are shown to capture the underlying characteristics of the Big dimensional data well, exhibiting excellent generalization performances. The drawback of using SVD on the entire dataset, however, is the high computational complexity involved. To address this, a fast divide and conquer approximation scheme is introduced to maintain computational tractability on high volume data. The resultant algorithm proposed is labeled here as Fast Singular Value Decomposition-Hidden-nodes based Extreme Learning Machine or FSVD-H-ELM in short. In FSVD-H-ELM, instead of identifying the SVD hidden nodes directly from the entire dataset, SVD hidden nodes are derived from multiple random subsets of data sampled from the original dataset. Comprehensive experiments and comparisons are conducted to assess the FSVD-H-ELM against other state-of-the-art algorithms. The results obtained demonstrated the superior generalization performance and efficiency of the FSVD-H-ELM. PMID:26907860

  12. GPU-based fast Monte Carlo dose calculation for proton therapy

    PubMed Central

    Jia, Xun; Schümann, Jan; Paganetti, Harald; Jiang, Steve B

    2015-01-01

    Accurate radiation dose calculation is essential for successful proton radiotherapy. Monte Carlo (MC) simulation is considered to be the most accurate method. However, the long computation time limits it from routine clinical applications. Recently, graphics processing units (GPUs) have been widely used to accelerate computationally intensive tasks in radiotherapy. We have developed a fast MC dose calculation package, gPMC, for proton dose calculation on a GPU. In gPMC, proton transport is modeled by the class II condensed history simulation scheme with a continuous slowing down approximation. Ionization, elastic and inelastic proton nucleus interactions are considered. Energy straggling and multiple scattering are modeled. Secondary electrons are not transported and their energies are locally deposited. After an inelastic nuclear interaction event, a variety of products are generated using an empirical model. Among them, charged nuclear fragments are terminated with energy locally deposited. Secondary protons are stored in a stack and transported after finishing transport of the primary protons, while secondary neutral particles are neglected. gPMC is implemented on the GPU under the CUDA platform. We have validated gPMC using the TOPAS/Geant4 MC code as the gold standard. For various cases including homogeneous and inhomogeneous phantoms as well as a patient case, good agreements between gPMC and TOPAS/Geant4 are observed. The gamma passing rate for the 2%/2 mm criterion is over 98.7% in the region with dose greater than 10% maximum dose in all cases, excluding low-density air regions. With gPMC it takes only 6–22 s to simulate 10 million source protons to achieve ~1% relative statistical uncertainty, depending on the phantoms and energy. This is an extremely high efficiency compared to the computational time of tens of CPU hours for TOPAS/Geant4. Our fast GPU-based code can thus facilitate the routine use of MC dose calculation in proton therapy. PMID:23128424

  13. GPU-based fast Monte Carlo dose calculation for proton therapy.

    PubMed

    Jia, Xun; Schümann, Jan; Paganetti, Harald; Jiang, Steve B

    2012-12-01

    Accurate radiation dose calculation is essential for successful proton radiotherapy. Monte Carlo (MC) simulation is considered to be the most accurate method. However, the long computation time limits it from routine clinical applications. Recently, graphics processing units (GPUs) have been widely used to accelerate computationally intensive tasks in radiotherapy. We have developed a fast MC dose calculation package, gPMC, for proton dose calculation on a GPU. In gPMC, proton transport is modeled by the class II condensed history simulation scheme with a continuous slowing down approximation. Ionization, elastic and inelastic proton nucleus interactions are considered. Energy straggling and multiple scattering are modeled. Secondary electrons are not transported and their energies are locally deposited. After an inelastic nuclear interaction event, a variety of products are generated using an empirical model. Among them, charged nuclear fragments are terminated with energy locally deposited. Secondary protons are stored in a stack and transported after finishing transport of the primary protons, while secondary neutral particles are neglected. gPMC is implemented on the GPU under the CUDA platform. We have validated gPMC using the TOPAS/Geant4 MC code as the gold standard. For various cases including homogeneous and inhomogeneous phantoms as well as a patient case, good agreements between gPMC and TOPAS/Geant4 are observed. The gamma passing rate for the 2%/2 mm criterion is over 98.7% in the region with dose greater than 10% maximum dose in all cases, excluding low-density air regions. With gPMC it takes only 6-22 s to simulate 10 million source protons to achieve ∼1% relative statistical uncertainty, depending on the phantoms and energy. This is an extremely high efficiency compared to the computational time of tens of CPU hours for TOPAS/Geant4. Our fast GPU-based code can thus facilitate the routine use of MC dose calculation in proton therapy. PMID

  14. Fast mass spectrometry-based enantiomeric excess determination of proteinogenic amino acids.

    PubMed

    Fleischer, Heidi; Thurow, Kerstin

    2013-03-01

    A rapid determination of the enantiomeric excess of proteinogenic amino acids is of great importance in various fields of chemical and biologic research and industries. Owing to their different biologic effects, enantiomers are interesting research subjects in drug development for the design of new and more efficient pharmaceuticals. Usually, the enantiomeric composition of amino acids is determined by conventional analytical methods such as liquid or gas chromatography or capillary electrophoresis. These analytical techniques do not fulfill the requirements of high-throughput screening due to their relative long analysis times. The method presented allows a fast analysis of chiral amino acids without previous time consuming chromatographic separation. The analytical measurements base on parallel kinetic resolution with pseudoenantiomeric mass tagged auxiliaries and were carried out by mass spectrometry with electrospray ionization. All 19 chiral proteinogenic amino acids were tested and Pro, Ser, Trp, His, and Glu were selected as model substrates for verification measurements. The enantiomeric excesses of amino acids with non-polar and aliphatic side chains as well as Trp and Phe (aromatic side chains) were determined with maximum deviations of the expected value less than or equal to 10ee%. Ser, Cys, His, Glu, and Asp were determined with deviations lower or equal to 14ee% and the enantiomeric excess of Tyr were calculated with 17ee% deviation. The total screening process is fully automated from the sample pretreatment to the data processing. The method presented enables fast measurement times about 1.38 min per sample and is applicable in the scope of high-throughput screenings. PMID:23232768

  15. GPU-based fast Monte Carlo dose calculation for proton therapy

    NASA Astrophysics Data System (ADS)

    Jia, Xun; Schümann, Jan; Paganetti, Harald; Jiang, Steve B.

    2012-12-01

    Accurate radiation dose calculation is essential for successful proton radiotherapy. Monte Carlo (MC) simulation is considered to be the most accurate method. However, the long computation time limits it from routine clinical applications. Recently, graphics processing units (GPUs) have been widely used to accelerate computationally intensive tasks in radiotherapy. We have developed a fast MC dose calculation package, gPMC, for proton dose calculation on a GPU. In gPMC, proton transport is modeled by the class II condensed history simulation scheme with a continuous slowing down approximation. Ionization, elastic and inelastic proton nucleus interactions are considered. Energy straggling and multiple scattering are modeled. Secondary electrons are not transported and their energies are locally deposited. After an inelastic nuclear interaction event, a variety of products are generated using an empirical model. Among them, charged nuclear fragments are terminated with energy locally deposited. Secondary protons are stored in a stack and transported after finishing transport of the primary protons, while secondary neutral particles are neglected. gPMC is implemented on the GPU under the CUDA platform. We have validated gPMC using the TOPAS/Geant4 MC code as the gold standard. For various cases including homogeneous and inhomogeneous phantoms as well as a patient case, good agreements between gPMC and TOPAS/Geant4 are observed. The gamma passing rate for the 2%/2 mm criterion is over 98.7% in the region with dose greater than 10% maximum dose in all cases, excluding low-density air regions. With gPMC it takes only 6-22 s to simulate 10 million source protons to achieve ˜1% relative statistical uncertainty, depending on the phantoms and energy. This is an extremely high efficiency compared to the computational time of tens of CPU hours for TOPAS/Geant4. Our fast GPU-based code can thus facilitate the routine use of MC dose calculation in proton therapy.

  16. Laser-based surface preparation of composite laminates leads to improved electrodes for electrical measurements

    NASA Astrophysics Data System (ADS)

    Almuhammadi, Khaled; Selvakumaran, Lakshmi; Alfano, Marco; Yang, Yang; Bera, Tushar Kanti; Lubineau, Gilles

    2015-12-01

    Electrical impedance tomography (EIT) is a low-cost, fast and effective structural health monitoring technique that can be used on carbon fiber reinforced polymers (CFRP). Electrodes are a key component of any EIT system and as such they should feature low resistivity as well as high robustness and reproducibility. Surface preparation is required prior to bonding of electrodes. Currently this task is mostly carried out by traditional sanding. However this is a time consuming procedure which can also induce damage to surface fibers and lead to spurious electrode properties. Here we propose an alternative processing technique based on the use of pulsed laser irradiation. The processing parameters that result in selective removal of the electrically insulating resin with minimum surface fiber damage are identified. A quantitative analysis of the electrical contact resistance is presented and the results are compared with those obtained using sanding.

  17. ISA and IBFVS: image space-based visualization of flow on surfaces.

    PubMed

    Laramee, Robert S; van Wijk, Jarke J; Jobard, Bruno; Hauser, Helwig

    2004-01-01

    We present a side-by-side analysis of two recent image space approaches for the visualization of vector fields on surfaces. The two methods, Image Space Advection (ISA) and Image-Based Flow Visualization for Curved Surfaces (IBFVS) generate dense representations of time-dependent vector fields with high spatio-temporal correlation. While the 3D vector fields are associated with arbitrary surfaces represented by triangular meshes, the generation and advection of texture properties is confined to image space. Fast frame rates are achieved by exploiting frame-to-frame coherency and graphics hardware. In our comparison of ISA and IBFVS, we point out the strengths and weaknesses of each approach and give recommendations as to when and where they are best applied. PMID:15527046

  18. Fiber-optic-based surface plasmon resonance (SPR) sensors for the detection of toxic nerve agents

    NASA Astrophysics Data System (ADS)

    Prakash, Anna M. C.; Kim, Yoon-Chang; Banerji, Soame; Masson, Jean-Francois; Booksh, Karl S.

    2004-03-01

    Analytical instruments capable of detecting nerve agents in battlefield conditions where speed, accuracy and ease of operation are a must in today's military. Fast detection and decontamination of nerve agents in very low concentrations is the primary focus of our research. The method presented here focuses on optimizing polymer stabilized sensing elements on the surface of SPR fiber-optic probes. A number of polymers & polymer supported metal complexes capable of reversibly binding to the species of interest & which have robust operation in hostile environments are incorporated with the fiber optic sensing elements. An optical technique, such as Surface Plasmon Resonance (SPR), better suited to rapid data collection without sample pretreatment is employed. The approach using polymer-based optical fibers with off-the-shelf SPR system components has been tested for the detection of Pinacolyl methylphosphonate (PMP), a simulant for nerve agent Soman. Surface initiated polymeric sensors have higher sensitivity toward detecting PMP than bulk-polymerized sensors.

  19. Automatic building detection based on Purposive FastICA (PFICA) algorithm using monocular high resolution Google Earth images

    NASA Astrophysics Data System (ADS)

    Ghaffarian, Saman; Ghaffarian, Salar

    2014-11-01

    This paper proposes an improved FastICA model named as Purposive FastICA (PFICA) with initializing by a simple color space transformation and a novel masking approach to automatically detect buildings from high resolution Google Earth imagery. ICA and FastICA algorithms are defined as Blind Source Separation (BSS) techniques for unmixing source signals using the reference data sets. In order to overcome the limitations of the ICA and FastICA algorithms and make them purposeful, we developed a novel method involving three main steps: 1-Improving the FastICA algorithm using Moore-Penrose pseudo inverse matrix model, 2-Automated seeding of the PFICA algorithm based on LUV color space and proposed simple rules to split image into three regions; shadow + vegetation, baresoil + roads and buildings, respectively, 3-Masking out the final building detection results from PFICA outputs utilizing the K-means clustering algorithm with two number of clusters and conducting simple morphological operations to remove noises. Evaluation of the results illustrates that buildings detected from dense and suburban districts with divers characteristics and color combinations using our proposed method have 88.6% and 85.5% overall pixel-based and object-based precision performances, respectively.

  20. Mechanochemical mechanism for fast reaction of metastable intermolecular composites based on dispersion of liquid metal

    NASA Astrophysics Data System (ADS)

    Levitas, Valery I.; Asay, Blaine W.; Son, Steven F.; Pantoya, Michelle

    2007-04-01

    An unexpected mechanism for fast reaction of Al nanoparticles covered by a thin oxide shell during fast heating is proposed and justified theoretically and experimentally. For nanoparticles, the melting of Al occurs before the oxide fracture. The volume change due to melting induces pressures of 1-2 GPa and causes dynamic spallation of the shell. The unbalanced pressure between the Al core and the exposed surface creates an unloading wave with high tensile pressures resulting in dispersion of atomic scale liquid Al clusters. These clusters fly at high velocity and their reaction is not limited by diffusion (this is the opposite of traditional mechanisms for micron particles and for nanoparticles at slow heating). Physical parameters controlling the melt dispersion mechanism are found by our analysis. In addition to an explanation of the extremely short reaction time, the following correspondence between our theory and experiments are obtained: (a) For the particle radius below some critical value, the flame propagation rate and the ignition time delay are independent of the radius; (b) damage of the oxide shell suppresses the melt dispersion mechanism and promotes the traditional diffusive oxidation mechanism; (c) nanoflakes react more like micron size (rather than nanosize) spherical particles. The reasons why the melt dispersion mechanism cannot operate for the micron particles or slow heating of nanoparticles are determined. Methods to promote the melt dispersion mechanism, to expand it to micron particles, and to improve efficiency of energetic metastable intermolecular composites are formulated. In particular, the following could promote the melt dispersion mechanism in micron particles: (a) Increasing the temperature at which the initial oxide shell is formed; (b) creating initial porosity in the Al; (c) mixing of the Al with a material with a low (even negative) thermal expansion coefficient or with a phase transformation accompanied by a volume reduction

  1. Fast and robust hydrogen sensors based on discontinuous palladium films on polyimide, fabricated on a wafer scale.

    PubMed

    Kiefer, T; Villanueva, L G; Fargier, F; Favier, F; Brugger, J

    2010-12-17

    Fast hydrogen sensors based on discontinuous palladium (Pd) films on supporting polyimide layers, fabricated by a cost-efficient and full-wafer compatible process, are presented. The films, deposited by electron-beam evaporation with a nominal thickness of 1.5 nm, consist of isolated Pd islands that are separated by nanoscopic gaps. On hydrogenation, the volume expansion of Pd brings initially separated islands into contact which leads to the creation of new electrical pathways through the film. The supporting polyimide layer provides both sufficient elasticity for the Pd nanoclusters to expand on hydrogenation and a sufficiently high surface energy for good adhesion of both film and contacting electrodes. The novel order of the fabrication processes involves a dicing step prior to the Pd deposition and stencil lithography for the patterning of microelectrodes. This allows us to preserve the as-deposited film properties. The devices work at room temperature, show response times of a few seconds and have a low power consumption of some tens of nW. PMID:21098952

  2. Antarctic and Arctic land-fast sea ice growth rates: an intercomparison based on stable isotope fractionation measurements

    NASA Astrophysics Data System (ADS)

    Smith, I.; Langhorne, P. J.; Gough, A. J.; Leonard, G. H.; Mahoney, A. R.; Eicken, H.; Van Hale, R.; Trodahl, H. J.; Haskell, T.

    2012-12-01

    The growth rate of sea ice (i.e., the change in sea ice thickness with time) is a critical factor affecting the thermohaline circulation because it determines the amount and timing of salt fluxes to the ocean. Studies of the colonisation of sea ice by microorganisms and the timing of ice-algal blooms, evident at depth horizons in sea ice, also require knowledge of growth rates. However, sea ice thickness and in particular growth rates of level ice are poorly known, mostly due to restrictions in remote sensing of these quantities. Direct measurements through repeated drilling, or the use of temperature probes or ultrasonic pingers (such as on ice mass balance buoys) are resource intensive, and are therefore limited to a few sites. An ideal methodology would allow retrospective reconstruction of sea ice growth rates from the analysis of ice cores taken at the end of the growth season. Previously developed methods have included salinity-based growth rate models, growth history deductions from thick section structural analysis and growth rate models based on the measurement of oxygen isotope fractionation in sea ice. In this presentation, we focus on the latter and compare measured growth rates with those derived from an existing isotope fractionation based model (Eicken, Ant. Res. Ser., 1998). In addition, comparisons are made with measured seasonal changes in δ18O values in Antarctic surface waters. The data presented have been collected for land-fast sea ice from McMurdo Sound, Antarctica and the Chukchi Sea near Barrow, Alaska. These two locations are ideally suited for this intercomparison study because both locations have a long history of sea ice and ocean observations. The Antarctic sea ice data are influenced by the appearance of waters from beneath an ice shelf. The Arctic sea ice growth rate and isotope data are from two sites, and are supported by oceanographic data, including under-ice current speeds, from a nearby mooring. Previous measurements of Arctic

  3. Novel spirometry based on optical surface imaging

    SciTech Connect

    Li, Guang Huang, Hailiang; Li, Diana G.; Chen, Qing; Gaebler, Carl P.; Mechalakos, James; Wei, Jie; Sullivan, James; Zatcky, Joan; Rimner, Andreas

    2015-04-15

    Purpose: To evaluate the feasibility of using optical surface imaging (OSI) to measure the dynamic tidal volume (TV) of the human torso during free breathing. Methods: We performed experiments to measure volume or volume change in geometric and deformable phantoms as well as human subjects using OSI. To assess the accuracy of OSI in volume determination, we performed experiments using five geometric phantoms and two deformable body phantoms and compared the values with those derived from geometric calculations and computed tomography (CT) measurements, respectively. To apply this technique to human subjects, an institutional review board protocol was established and three healthy volunteers were studied. In the human experiment, a high-speed image capture mode of OSI was applied to acquire torso images at 4–5 frames per second, which was synchronized with conventional spirometric measurements at 5 Hz. An in-house MATLAB program was developed to interactively define the volume of interest (VOI), separate the thorax and abdomen, and automatically calculate the thoracic and abdominal volumes within the VOIs. The torso volume change (TV C = ΔV{sub torso} = ΔV{sub thorax} + ΔV{sub abdomen}) was automatically calculated using full-exhalation phase as the reference. The volumetric breathing pattern (BP{sub v} = ΔV{sub thorax}/ΔV{sub torso}) quantifying thoracic and abdominal volume variations was also calculated. Under quiet breathing, TVC should equal the tidal volume measured concurrently by a spirometer with a conversion factor (1.08) accounting for internal and external differences of temperature and moisture. Another MATLAB program was implemented to control the conventional spirometer that was used as the standard. Results: The volumes measured from the OSI imaging of geometric phantoms agreed with the calculated volumes with a discrepancy of 0.0% ± 1.6% (range −1.9% to 2.5%). In measurements from the deformable torso/thorax phantoms, the volume

  4. Novel spirometry based on optical surface imaging

    PubMed Central

    Li, Guang; Huang, Hailiang; Li, Diana G.; Chen, Qing; Gaebler, Carl P.; Sullivan, James; Zatcky, Joan; Rimner, Andreas; Mechalakos, James

    2015-01-01

    Purpose: To evaluate the feasibility of using optical surface imaging (OSI) to measure the dynamic tidal volume (TV) of the human torso during free breathing. Methods: We performed experiments to measure volume or volume change in geometric and deformable phantoms as well as human subjects using OSI. To assess the accuracy of OSI in volume determination, we performed experiments using five geometric phantoms and two deformable body phantoms and compared the values with those derived from geometric calculations and computed tomography (CT) measurements, respectively. To apply this technique to human subjects, an institutional review board protocol was established and three healthy volunteers were studied. In the human experiment, a high-speed image capture mode of OSI was applied to acquire torso images at 4–5 frames per second, which was synchronized with conventional spirometric measurements at 5 Hz. An in-house matlab program was developed to interactively define the volume of interest (VOI), separate the thorax and abdomen, and automatically calculate the thoracic and abdominal volumes within the VOIs. The torso volume change (TV C = ΔVtorso = ΔVthorax + ΔVabdomen) was automatically calculated using full-exhalation phase as the reference. The volumetric breathing pattern (BPv = ΔVthorax/ΔVtorso) quantifying thoracic and abdominal volume variations was also calculated. Under quiet breathing, TVC should equal the tidal volume measured concurrently by a spirometer with a conversion factor (1.08) accounting for internal and external differences of temperature and moisture. Another matlab program was implemented to control the conventional spirometer that was used as the standard. Results: The volumes measured from the OSI imaging of geometric phantoms agreed with the calculated volumes with a discrepancy of 0.0% ± 1.6% (range −1.9% to 2.5%). In measurements from the deformable torso/thorax phantoms, the volume differences measured using OSI imaging and CT

  5. Fast community detection based on sector edge aggregation metric model in hyperbolic space

    NASA Astrophysics Data System (ADS)

    Wang, Zuxi; Li, Qingguang; Xiong, Wei; Jin, Fengdong; Wu, Yao

    2016-06-01

    By studying the edge aggregation characteristic of nodes in hyperbolic space, Sector Edge Aggregation Metric (SEAM) model is proposed and theoretically proved in this paper. In hyperbolic disk SEAM model determines the minimum angular range of a sector which possesses the maximal edge aggregation of nodes. The set of nodes within such sector has dense internal links, which corresponds with the characteristic of community structure. Based on SEAM model, we propose a fast community detection algorithm called Greedy Optimization Modularity Algorithm (GOMA) which employs greedy optimization strategy and hyperbolic coordinates. GOMA firstly divides initial communities according to the quantitative results of sector edge aggregation given by SEAM and the nodes' hyperbolic coordinates, then based on greedy optimization strategy, only merges the two angular neighboring communities in hyperbolic disk to optimize the network modularity function, and consequently obtains high-quality community detection. The strategies of initial community partition and merger in hyperbolic space greatly improve the speed of searching the most optimal modularity. Experimental results indicate that GOMA is able to detect out high-quality community structure in synthetic and real networks, and performs better when applied to the large-scale and dense networks with strong clustering.

  6. Estimates for Pu-239 loadings in burial ground culverts based on fast/slow neutron measurements

    SciTech Connect

    Winn, W.G.; Hochel, R.C.; Hofstetter, K.J.; Sigg, R.A.

    1989-08-15

    This report provides guideline estimates for Pu-239 mass loadings in selected burial ground culverts. The relatively high recorded Pu-239 contents of these culverts have been appraised as suspect relative to criticality concerns, because they were assayed only with the solid waste monitor (SWM) per gamma-ray counting. After 1985, subsequent waste was also assayed with the neutron coincidence counter (NCC), and a comparison of the assay methods showed that the NCC generally yielded higher assays than the SWM. These higher NCC readings signaled a need to conduct non-destructive/non-intrusive nuclear interrogations of these culverts, and a technical team conducted scoping measurements to illustrate potential assay methods based on neutron and/or gamma counting. A fast/slow neutron method has been developed to estimate the Pu-239 in the culverts. In addition, loading records include the SWM assays of all Pu-239 cuts of some of the culvert drums and these data are useful in estimating the corresponding NCC drum assays from NCC vs SWM data. Together, these methods yield predictions based on direct measurements and statistical inference.

  7. Fast photo-acoustic imaging based on multi-element linear transducer array

    NASA Astrophysics Data System (ADS)

    Yin, Bangzheng; Xing, Da; Yang, Diwu; Tan, Yi; Chen, Qun

    2005-04-01

    Photoacoustic imaging combines the contrast advantage of pure optical imaging and the resolution advantage of pure ultrasonic imaging. It has become a popular research subject at present. A fast photoacoustic imaging system based on multi-element linear transducer array and phase-controlled focus method was developed and tested on phantoms and tissues. A Q switched Nd:YAG laser operating at 532nm was used in our experiment as thermal source. The multi-element linear transducer array consists of 320 elements. By phase-controlled focus method, 64 signals, one of which gathered by 11-group element, make up of an image. Experiment results can map the distribution of the optical absorption correctly. The same transducer array also can operate as a conventional phase array and produced ultrasound imaging. Compared to other existing technology and algorithm, the PA imaging based on transducer array was characterize by speediness and convenience. It can provide a new approach for tissue functional imaging in vivo, and may have potentials in developing into an appliance for clinic diagnosis.

  8. Fast optimization method based on the diffuser dot density for uniformity of the backlight module.

    PubMed

    Huang, Bing-Le; Guo, Tai-Liang

    2016-02-20

    A fast optimization method based on the diffuser dot density (DDD) for uniformity of the backlight module (BLM) is proposed in the paper. First, the relationship between the efficiency of the light emerging and the DDD is analyzed, and then a simulation model that is employed to acquire a serial of simulating data is constructed. Second, a mathematic method to profit the relationship is adopted, and a polynomial relationship is derived. Finally, an algorithm to adjust the DDD and optimize the uniformity of the BLM based on the DDD is constructed. The simulation results prove that only by three times optimization, the uniformity of the BLM can reach 85.6%, and the experimental result indicates that the algorithm proposed in the paper can improve the uniformity rapidly. The final experimental result is that the uniformity of the third optimization reaches 77.4%, which satisfies the target 75% in the phase of designing the BLM. Compared to the conventional optimization method, the method can speed up the procedure and lower the expense of developing the BLM in fabricating the liquid-crystal display. PMID:26906605

  9. GPU-based ultra-fast direct aperture optimization for online adaptive radiation therapy

    NASA Astrophysics Data System (ADS)

    Men, Chunhua; Jia, Xun; Jiang, Steve B.

    2010-08-01

    Online adaptive radiation therapy (ART) has great promise to significantly reduce normal tissue toxicity and/or improve tumor control through real-time treatment adaptations based on the current patient anatomy. However, the major technical obstacle for clinical realization of online ART, namely the inability to achieve real-time efficiency in treatment re-planning, has yet to be solved. To overcome this challenge, this paper presents our work on the implementation of an intensity-modulated radiation therapy (IMRT) direct aperture optimization (DAO) algorithm on the graphics processing unit (GPU) based on our previous work on the CPU. We formulate the DAO problem as a large-scale convex programming problem, and use an exact method called the column generation approach to deal with its extremely large dimensionality on the GPU. Five 9-field prostate and five 5-field head-and-neck IMRT clinical cases with 5 × 5 mm2 beamlet size and 2.5 × 2.5 × 2.5 mm3 voxel size were tested to evaluate our algorithm on the GPU. It takes only 0.7-3.8 s for our implementation to generate high-quality treatment plans on an NVIDIA Tesla C1060 GPU card. Our work has therefore solved a major problem in developing ultra-fast (re-)planning technologies for online ART.

  10. Accurate and Fast Simulation of Channel Noise in Conductance-Based Model Neurons by Diffusion Approximation

    PubMed Central

    Linaro, Daniele; Storace, Marco; Giugliano, Michele

    2011-01-01

    Stochastic channel gating is the major source of intrinsic neuronal noise whose functional consequences at the microcircuit- and network-levels have been only partly explored. A systematic study of this channel noise in large ensembles of biophysically detailed model neurons calls for the availability of fast numerical methods. In fact, exact techniques employ the microscopic simulation of the random opening and closing of individual ion channels, usually based on Markov models, whose computational loads are prohibitive for next generation massive computer models of the brain. In this work, we operatively define a procedure for translating any Markov model describing voltage- or ligand-gated membrane ion-conductances into an effective stochastic version, whose computer simulation is efficient, without compromising accuracy. Our approximation is based on an improved Langevin-like approach, which employs stochastic differential equations and no Montecarlo methods. As opposed to an earlier proposal recently debated in the literature, our approximation reproduces accurately the statistical properties of the exact microscopic simulations, under a variety of conditions, from spontaneous to evoked response features. In addition, our method is not restricted to the Hodgkin-Huxley sodium and potassium currents and is general for a variety of voltage- and ligand-gated ion currents. As a by-product, the analysis of the properties emerging in exact Markov schemes by standard probability calculus enables us for the first time to analytically identify the sources of inaccuracy of the previous proposal, while providing solid ground for its modification and improvement we present here. PMID:21423712

  11. Fast video shot boundary detection based on SVD and pattern matching.

    PubMed

    Lu, Zhe-Ming; Shi, Yong

    2013-12-01

    Video shot boundary detection (SBD) is the first and essential step for content-based video management and structural analysis. Great efforts have been paid to develop SBD algorithms for years. However, the high computational cost in the SBD becomes a block for further applications such as video indexing, browsing, retrieval, and representation. Motivated by the requirement of the real-time interactive applications, a unified fast SBD scheme is proposed in this paper. We adopted a candidate segment selection and singular value decomposition (SVD) to speed up the SBD. Initially, the positions of the shot boundaries and lengths of gradual transitions are predicted using adaptive thresholds and most non-boundary frames are discarded at the same time. Only the candidate segments that may contain the shot boundaries are preserved for further detection. Then, for all frames in each candidate segment, their color histograms in the hue-saturation-value) space are extracted, forming a frame-feature matrix. The SVD is then performed on the frame-feature matrices of all candidate segments to reduce the feature dimension. The refined feature vector of each frame in the candidate segments is obtained as a new metric for boundary detection. Finally, cut and gradual transitions are identified using our pattern matching method based on a new similarity measurement. Experiments on TRECVID 2001 test data and other video materials show that the proposed scheme can achieve a high detection speed and excellent accuracy compared with recent SBD schemes. PMID:24058028

  12. Fast k-space-based evaluation of imaging properties of ultrasound apertures

    NASA Astrophysics Data System (ADS)

    Zapf, M.; Dapp, R.; Hardt, M.; Henning, P. A.; Ruiter, N. V.

    2011-03-01

    At the Karlsruhe Institute of Technology (KIT) a three-dimensional ultrasound computer tomography (3D USCT) system for early breast cancer diagnosis is being developed. This method promises reproducible volume images of the female breast in 3D. Initial measurements and a simulation based optimization method, which took several physical properties into account, led to a new aperture setup. Yet this simulation is computational too demanding to systematically evaluate the different 'virtual' apertures which can be achieved by rotation and lifting of the system. In optics a Fourier based approach is available to simulate imaging systems as linear systems. For the two apertures used in our project and one hypothetical linear array aperture this concept was evaluated and compared to a reference simulation. An acceptable conformity between the new approach and the reference simulation could be shown. With this approach a fast evaluation of optimal 'virtual' apertures for specific measurement objects and imaging constraints can be carried out within an acceptable time constraint.

  13. A laser diode based system for calibration of fast time-of-flight detectors

    NASA Astrophysics Data System (ADS)

    Bertoni, R.; Bonesini, M.; de Bari, A.; Rossella, M.

    2016-05-01

    A system based on commercially available items, such as a laser diode, emitting in the visible range ~ 400 nm, and multimode fiber patches, fused fiber splitters and optical switches may be assembled, for time calibration of multi-channels time-of-flight (TOF) detectors with photomultipliers' (PMTs') readout. As available laser diode sources have unfortunately limited peak power, the main experimental problem is the tight light power budget of such a system. In addition, while the technology for fused fiber splitters is common in the Telecom wavelength range (λ ~ 850, 1300–1500 nm), it is not easily available in the visible one. Therefore, extensive laboratory tests had to be done on purpose, to qualify the used optical components, and a full scale timing calibration prototype was built. Obtained results show that with such a system, a calibration resolution (σ) in the range 20–30 ps may be within reach. Therefore, fast multi-channels TOF detectors, with timing resolutions in the range 50–100 ps, may be easily calibrated in time. Results on tested optical components may be of interest also for time calibration of different light detection systems based on PMTs, as the ones used for detection of the vacuum ultraviolet scintillation light emitted by ionizing particles in large LAr TPCs.

  14. Field calibration of binocular stereo vision based on fast reconstruction of 3D control field

    NASA Astrophysics Data System (ADS)

    Zhang, Haijun; Liu, Changjie; Fu, Luhua; Guo, Yin

    2015-08-01

    Construction of high-speed railway in China has entered a period of rapid growth. To accurately and quickly obtain the dynamic envelope curve of high-speed vehicle is an important guarantee for safe driving. The measuring system is based on binocular stereo vision. Considering the difficulties in field calibration such as environmental changes and time limits, carried out a field calibration method based on fast reconstruction of three-dimensional control field. With the rapid assembly of pre-calibrated three-dimensional control field, whose coordinate accuracy is guaranteed by manufacture accuracy and calibrated by V-STARS, two cameras take a quick shot of it at the same time. The field calibration parameters are then solved by the method combining linear solution with nonlinear optimization. Experimental results showed that the measurement accuracy can reach up to +/- 0.5mm, and more importantly, in the premise of guaranteeing accuracy, the speed of the calibration and the portability of the devices have been improved considerably.

  15. Fast Gaussian kernel learning for classification tasks based on specially structured global optimization.

    PubMed

    Zhong, Shangping; Chen, Tianshun; He, Fengying; Niu, Yuzhen

    2014-09-01

    For a practical pattern classification task solved by kernel methods, the computing time is mainly spent on kernel learning (or training). However, the current kernel learning approaches are based on local optimization techniques, and hard to have good time performances, especially for large datasets. Thus the existing algorithms cannot be easily extended to large-scale tasks. In this paper, we present a fast Gaussian kernel learning method by solving a specially structured global optimization (SSGO) problem. We optimize the Gaussian kernel function by using the formulated kernel target alignment criterion, which is a difference of increasing (d.i.) functions. Through using a power-transformation based convexification method, the objective criterion can be represented as a difference of convex (d.c.) functions with a fixed power-transformation parameter. And the objective programming problem can then be converted to a SSGO problem: globally minimizing a concave function over a convex set. The SSGO problem is classical and has good solvability. Thus, to find the global optimal solution efficiently, we can adopt the improved Hoffman's outer approximation method, which need not repeat the searching procedure with different starting points to locate the best local minimum. Also, the proposed method can be proven to converge to the global solution for any classification task. We evaluate the proposed method on twenty benchmark datasets, and compare it with four other Gaussian kernel learning methods. Experimental results show that the proposed method stably achieves both good time-efficiency performance and good classification performance. PMID:24929345

  16. Fast gas heating in N2/O2 mixtures under nanosecond surface dielectric barrier discharge: the effects of gas pressure and composition

    PubMed Central

    Nudnova, M. M; Kindysheva, S. V; Aleksandrov, N. L; Starikovskii, A. Yu

    2015-01-01

    The fractional electron power quickly transferred to heat in non-equilibrium plasmas was studied experimentally and theoretically in N2/O2 mixtures subjected to high electric fields. Measurements were performed in and after a nanosecond surface dielectric barrier discharge at various (300–750 Torr) gas pressures and (50–100%) N2 percentages. Observations showed that the efficiency of fast gas heating is almost independent of pressure and becomes more profound when the fraction of O2 in N2/O2 mixtures increases. The processes that contribute towards the fast transfer of electron energy to thermal energy were numerically simulated under the conditions considered. Calculations were compared with measurements and the main channels of fast gas heating were analysed at the gas pressures, compositions and electric fields under study. It was shown that efficient fast gas heating in the mixtures with high fraction of O2 is due to a notable contribution of heat release during quenching of electronically excited N2 states in collisions with O2 molecules and to ion–ion recombination. The effect of hydrocarbon addition to air on fast gas heating was numerically estimated. It was concluded that the fractional electron power transferred to heat in air, as a first approximation, could be used to estimate this effect in lean and stoichiometric hydrocarbon–air mixtures. PMID:26170431

  17. 70 Group Neutron Fast Reactor Cross Section Set Based on JENDL-2B.

    Energy Science and Technology Software Center (ESTSC)

    1984-02-06

    Version 00 These multigroup cross sections are used in fast reactor calculations. The benchmark calculations for the 23 fast critical assemblies used in the benchmark tests of JFS-2 were performed with one-dimensional diffusion theory by using the JFS-3-J2 set.

  18. FAST ANALYSIS OF BEVERAGES USING A MASS SPECTRAL BASED CHEMICAL SENSOR

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Detection of adulteration, contamination or inconsistencies in food and flavor samples should be accurate and fast. Chemical sensors are ideal for these types of applications because they provide fast measurement times (2-6 minutes). While analysis times are crucial, accuracy and precision of the ...

  19. Project FAST.

    ERIC Educational Resources Information Center

    Essexville-Hampton Public Schools, MI.

    Described are components of Project FAST (Functional Analysis Systems Training) a nationally validated project to provide more effective educational and support services to learning disordered children and their regular elementary classroom teachers. The program is seen to be based on a series of modules of delivery systems ranging from mainstream…

  20. Rough surface scattering based on facet model

    NASA Technical Reports Server (NTRS)

    Khamsi, H. R.; Fung, A. K.; Ulaby, F. T.

    1974-01-01

    A model for the radar return from bare ground was developed to calculate the radar cross section of bare ground and the effect of the frequency averaging on the reduction of the variance of the return. It is shown that, by assuming that the distribution of the slope to be Gaussian and that the distribution of the length of the facet to be in the form of the positive side of a Gaussian distribution, the results are in good agreement with experimental data collected by an 8- to 18-GHz radar spectrometer system. It is also shown that information on the exact correlation length of the small structure on the ground is not necessary; an effective correlation length may be calculated based on the facet model and the wavelength of the incident wave.

  1. Fast Mean-Shift Based Classification of Very High Resolution Images: Application to Forest Cover Mapping

    NASA Astrophysics Data System (ADS)

    Boukir, S.; Jones, S.; Reinke, K.

    2012-07-01

    This paper presents a new unsupervised classification method which aims to effectively and efficiently map remote sensing data. The Mean-Shift (MS) algorithm, a non parametric density-based clustering technique, is at the core of our method. This powerful clustering algorithm has been successfully used for both the classification and the segmentation of gray scale and color images during the last decade. However, very little work has been reported regarding the performance of this technique on remotely sensed images. The main disadvantage of the MS algorithm lies on its high computational costs. Indeed, it is based on an optimization procedure to determine the modes of the pixels density. To investigate the MS algorithm in the difficult context of very high resolution remote sensing imagery, we use a fast version of this algorithm which has been recently proposed, namely the Path-Assigned Mean Shift (PAMS). This algorithm is up to 5 times faster than other fast MS algorithms while inducing a low loss in quality compared to the original MS version. To compensate for this loss, we propose to use the K modes (cluster centroids) obtained after convergence of the PAMS algorithm as an initialization of a K-means clustering algorithm. The latter converges very quickly to a refined solution to the underlying clustering problem. Furthermore, it does not suffer the main drawback of the classic K-means algorithm (the number of clusters K needs to be specified) as K is automatically determined via the MS mode-seeking procedure. We demonstrate the effectiveness of this two-stage clustering method in performing automatic classification of aerial forest images. Both individual bands and band combination trails are presented. When compared to the classical PAMS algorithm, our technique is better in terms of classification quality. The improvement in classification is significant both visually and statistically. The whole classification process is performed in a few seconds on

  2. Surface classification and detection of latent fingerprints based on 3D surface texture parameters

    NASA Astrophysics Data System (ADS)

    Gruhn, Stefan; Fischer, Robert; Vielhauer, Claus

    2012-06-01

    In the field of latent fingerprint detection in crime scene forensics the classification of surfaces has importance. A new method for the scientific analysis of image based information for forensic science was investigated in the last years. Our image acquisition based on a sensor using Chromatic White Light (CWL) with a lateral resolution up to 2 μm. The used FRT-MicroProf 200 CWL 600 measurement device is able to capture high-resolution intensity and topography images in an optical and contact-less way. In prior work, we have suggested to use 2D surface texture parameters to classify various materials, which was a novel approach in the field of criminalistic forensic using knowledge from surface appearance and a chromatic white light sensor. A meaningful and useful classification of different crime scene specific surfaces is not existent. In this work, we want to extend such considerations by the usage of fourteen 3D surface parameters, called 'Birmingham 14'. In our experiment we define these surface texture parameters and use them to classify ten different materials in this test set-up and create specific material classes. Further it is shown in first experiments, that some surface texture parameters are sensitive to separate fingerprints from carrier surfaces. So far, the use of surface roughness is mainly known within the framework of material quality control. The analysis and classification of the captured 3D-topography images from crime scenes is important for the adaptive preprocessing depending on the surface texture. The adaptive preprocessing in dependency of surface classification is necessary for precise detection because of the wide variety of surface textures. We perform a preliminary study in usage of these 3D surface texture parameters as feature for the fingerprint detection. In combination with a reference sample we show that surface texture parameters can be an indication for a fingerprint and can be a feature in latent fingerprint detection.

  3. Fractal surface synthesis based on two dimensional discrete Fourier transform

    NASA Astrophysics Data System (ADS)

    Zhou, Chao; Gao, Chenghui; Huang, Jianmeng

    2013-11-01

    The discrete Fourier transform(DFT) is used for fractional Brownian motion(FBM) surface synthesis in tribology(i.e., contact, sliding, and sealing, etc). However, the relationship between fractal parameters(fractal dimension and scale factor) and traditional parameters, the influence of fractal parameters on surface appearance, have not been deeply discussed yet. These lead to some kind of difficulty to ensure the synthesized surfaces with ideal fractal characteristic, required traditional parameters and geometric appearance. A quantitative relationship between fractal parameters and the root mean square deviation of surface ( Sq) is derived based on the energy conservation property between the space and frequency domain of DFT. Under the stability assumption, the power spectrum of a FBM surface is composed of concentric circles strictly, a series of FBM surfaces with prescribed Sq could be synthesized with given fractal dimension, scale factor, and sampling numbers, but the ten-point height( Sz), the skewness( Ssk) and the kurtosis( Sku) are still in random, where the probability distributions of Sz and Ssk are approximately normal distribution. Furthermore, by iterative searching, a surface with desired Abbott-Firestone curve could be obtained among those surfaces. An intuitive explanation for the influence of fractal dimension and scale factor on surface appearance is obtained by discussing the effects on the ratio of energy between high and low frequency components. Based on the relationship between Sq and surface energy, a filtering method of surface with controllable Sq is proposed. The proposed research ensures the synthesized surfaces possess ideal FBM properties with prescribed Sq, offers a method for selecting desired Abbott-Firestone curve of synthesized fractal surfaces, and makes it possible to control the Sq of surfaces after filtering.

  4. Cell Surface-based Sensing with Metallic Nanoparticles

    PubMed Central

    Jiang, Ziwen; Rotello, Vincent M.

    2015-01-01

    Metallic nanoparticles provide versatile scaffolds for biosensing applications. In this review, we focus on the use of metallic nanoparticles for cell surface sensings. Examples of the use of both specific recognition and array-based “chemical nose” approaches to cell surface sensing will be discussed. PMID:25853985

  5. Antipodally Invariant Metrics for Fast Regression-Based Super-Resolution.

    PubMed

    Perez-Pellitero, Eduardo; Salvador, Jordi; Ruiz-Hidalgo, Javier; Rosenhahn, Bodo

    2016-06-01

    Dictionary-based super-resolution (SR) algorithms usually select dictionary atoms based on the distance or similarity metrics. Although the optimal selection of the nearest neighbors is of central importance for such methods, the impact of using proper metrics for SR has been overlooked in literature, mainly due to the vast usage of Euclidean distance. In this paper, we present a very fast regression-based algorithm, which builds on the densely populated anchored neighborhoods and sublinear search structures. We perform a study of the nature of the features commonly used for SR, observing that those features usually lie in the unitary hypersphere, where every point has a diametrically opposite one, i.e., its antipode, with same module and angle, but the opposite direction. Even though, we validate the benefits of using antipodally invariant metrics, most of the binary splits use Euclidean distance, which does not handle antipodes optimally. In order to benefit from both the worlds, we propose a simple yet effective antipodally invariant transform that can be easily included in the Euclidean distance calculation. We modify the original spherical hashing algorithm with this metric in our antipodally invariant spherical hashing scheme, obtaining the same performance as a pure antipodally invariant metric. We round up our contributions with a novel feature transform that obtains a better coarse approximation of the input image thanks to iterative backprojection. The performance of our method, which we named antipodally invariant SR, improves quality (Peak Signal to Noise Ratio) and it is faster than any other state-of-the-art method. PMID:27046898

  6. Fast and powerful heritability inference for family-based neuroimaging studies

    PubMed Central

    Ganjgahi, Habib; Winkler, Anderson M.; Glahn, David C.; Blangero, John; Kochunov, Peter; Nichols, Thomas E.

    2015-01-01

    Heritability estimation has become an important tool for imaging genetics studies. The large number of voxel- and vertex-wise measurements in imaging genetics studies presents a challenge both in terms of computational intensity and the need to account for elevated false positive risk because of the multiple testing problem. There is a gap in existing tools, as standard neuroimaging software cannot estimate heritability, and yet standard quantitative genetics tools cannot provide essential neuroimaging inferences, like family-wise error corrected voxel-wise or cluster-wiseP-values. Moreover, available heritability tools rely on P-values that can be inaccurate with usual parametric inference methods. In this work we develop fast estimation and inference procedures for voxel-wise heritability, drawing on recent methodological results that simplify heritability likelihood computations (Blangero etal., 2013). We review the family of score and Wald tests and propose novel inference methods based on explained sum of squares of an auxiliary linear model. To address problems with inaccuracies with the standard results used to find P-values, we propose four different permutation schemes to allow semi-parametric inference (parametric likelihood-based estimation, non-parametric sampling distribution). In total, we evaluate 5 different significance tests for heritability, with either asymptotic parametric or permutation-basedP-value computations. We identify a number of tests that are both computationally efficient and powerful, making them ideal candidates for heritability studies in the massive data setting. We illustrate our method on fractional anisotropy measures in 859 subjects from the Genetics of Brain Structure study. PMID:25812717

  7. The relationship between contrast, resolution and detectability in accelerator-based fast neutron radiography

    SciTech Connect

    Ambrosi, R. M.; Watterson, J. I. W.

    1999-06-10

    Fast neutron radiography as a method for non destructive testing is a fast growing field of research. At the Schonland Research Center for Nuclear Sciences we have been engaged in the formulation of a model for the physics of image formation in fast neutron radiography (FNR). This involves examining all the various factors that affect image formation in FNR by experimental and Monte Carlo methods. One of the major problems in the development of a model for fast neutron radiography is the determination of the factors that affect image contrast and resolution. Monte Carlo methods offer an ideal tool for the determination of the origin of many of these factors. In previous work the focus of these methods has been the determination of the scattered neutron field in both a scintillator and a fast neutron radiography facility. As an extension of this work MCNP has been used to evaluate the role neutron scattering in a specimen plays in image detectability. Image processing of fast neutron radiographs is a necessary method of enhancing the detectability of features in an image. MCNP has been used to determine the part it can play in indirectly improving image resolution and aiding in image processing. The role noise plays in fast neutron radiography and its impact on image reconstruction has been evaluated. All these factors aid in the development of a model describing the relationship between contrast, resolution and detectability.

  8. Advanced magnetic suspensions for vibration isolation and fast-attitude control of space-based generic pointing mounts

    NASA Technical Reports Server (NTRS)

    Bosley, Robert W.; Trivedi, Anil N.

    1991-01-01

    Advanced magnetic suspension for vibration isolation and fast-attitude control of space-based generic pointing mounts (GPM) is presented in the form of viewgraphs. The following subject areas are covered: design criteria for GPM; GPM system features; GPM performance characteristics; GPM functional block diagram; and other applications for generic magnetic suspension technologies.

  9. A Fast Framework for Abrupt Change Detection Based on Binary Search Trees and Kolmogorov Statistic.

    PubMed

    Qi, Jin-Peng; Qi, Jie; Zhang, Qing

    2016-01-01

    Change-Point (CP) detection has attracted considerable attention in the fields of data mining and statistics; it is very meaningful to discuss how to quickly and efficiently detect abrupt change from large-scale bioelectric signals. Currently, most of the existing methods, like Kolmogorov-Smirnov (KS) statistic and so forth, are time-consuming, especially for large-scale datasets. In this paper, we propose a fast framework for abrupt change detection based on binary search trees (BSTs) and a modified KS statistic, named BSTKS (binary search trees and Kolmogorov statistic). In this method, first, two binary search trees, termed as BSTcA and BSTcD, are constructed by multilevel Haar Wavelet Transform (HWT); second, three search criteria are introduced in terms of the statistic and variance fluctuations in the diagnosed time series; last, an optimal search path is detected from the root to leaf nodes of two BSTs. The studies on both the synthetic time series samples and the real electroencephalograph (EEG) recordings indicate that the proposed BSTKS can detect abrupt change more quickly and efficiently than KS, t-statistic (t), and Singular-Spectrum Analyses (SSA) methods, with the shortest computation time, the highest hit rate, the smallest error, and the highest accuracy out of four methods. This study suggests that the proposed BSTKS is very helpful for useful information inspection on all kinds of bioelectric time series signals. PMID:27413364

  10. Constrained source space imaging: application to fast, region-based functional MRI.

    PubMed

    Chiew, Mark; Graham, Simon J

    2013-10-01

    A new technique called constrained source space imaging is introduced that holds promise for ultrafast acquisition of functional magnetic resonance imaging data. A sparse set of arbitrarily positioned, coarse voxels is first localized using radiofrequency selective excitation, from which magnetization signals are separated using only the spatial sensitivities of multichannel receiver coils, without the need for k-space encoding using imaging gradients. This method permits very fast acquisitions of targeted magnetization without complex or time-consuming image reconstruction techniques. Furthermore, because the data acquisition is performed without imaging gradients, T2* decays can be densely sampled and processed for contrast enhancement to improve functional magnetic resonance imaging data quality. Here, the constrained source space imaging technique is validated in proof-of-concept form, for a simple functional magnetic resonance imaging motor task using a prototype dual-band stimulated echo acquisition mode excitation to image four voxels at TR = 250 ms. Results demonstrate good voxel signal separation and good characterization of hemodynamic responses in primary motor cortices (M1) and supplementary motor areas through T2* fitting of the measured signals. With further refinement, the constrained source space imaging method has potential utility in a priori ROI-based functional magnetic resonance imaging experiments with TR values under 100 ms. Rapid, multivoxel measurements of other sources of MR signal contrast are also possible. PMID:23225605

  11. 3D Fast Automatic Segmentation of Kidney Based on Modified AAM and Random Forest.

    PubMed

    Jin, Chao; Shi, Fei; Xiang, Dehui; Jiang, Xueqing; Zhang, Bin; Wang, Ximing; Zhu, Weifang; Gao, Enting; Chen, Xinjian

    2016-06-01

    In this paper, a fully automatic method is proposed to segment the kidney into multiple components: renal cortex, renal column, renal medulla and renal pelvis, in clinical 3D CT abdominal images. The proposed fast automatic segmentation method of kidney consists of two main parts: localization of renal cortex and segmentation of kidney components. In the localization of renal cortex phase, a method which fully combines 3D Generalized Hough Transform (GHT) and 3D Active Appearance Models (AAM) is applied to localize the renal cortex. In the segmentation of kidney components phase, a modified Random Forests (RF) method is proposed to segment the kidney into four components based on the result from localization phase. During the implementation, a multithreading technology is applied to speed up the segmentation process. The proposed method was evaluated on a clinical abdomen CT data set, including 37 contrast-enhanced volume data using leave-one-out strategy. The overall true-positive volume fraction and false-positive volume fraction were 93.15%, 0.37% for renal cortex segmentation; 83.09%, 0.97% for renal column segmentation; 81.92%, 0.55% for renal medulla segmentation; and 80.28%, 0.30% for renal pelvis segmentation, respectively. The average computational time of segmenting kidney into four components took 20 seconds. PMID:26742124

  12. Fast and selective extraction of sulfonamides from honey based on magnetic molecularly imprinted polymer.

    PubMed

    Chen, Ligang; Zhang, Xiaopan; Sun, Lei; Xu, Yang; Zeng, Qinglei; Wang, Hui; Xu, Haoyan; Yu, Aimin; Zhang, Hanqi; Ding, Lan

    2009-11-11

    A fast and selective method was developed for the determination of sulfonamides (SAs) in honey based on magnetic molecularly imprinted polymer. The extraction was carried out by blending and stirring the sample, extraction solvent and polymers. When the extraction was complete, the polymers, along with the captured analytes, were easily separated from the sample matrix by an adscititious magnet. The analytes eluted from the polymers were determined by liquid chromatography-tandem mass spectrometry. Under the optimal conditions, the detection limits of SAs are in the range of 1.5-4.3 ng g(-1). The relative standard deviations of intra- and interday ranging from 3.7% to 7.9% and from 4.3% to 9.9% are obtained, respectively. The proposed method was successfully applied to determine SAs including sulfadiazine, sulfamerazine, sulfamethoxydiazine, sulfamonomethoxine, sulfadimethoxine, sulfamethoxazole and sulfaquinoxaline in different honey samples. The recoveries of SAs in these samples from 67.1% to 93.6% were obtained. PMID:19817457

  13. Fast lemons and sour boulders: Testing crossmodal correspondences using an internet-based testing methodology

    PubMed Central

    Woods, Andy T.; Spence, Charles; Butcher, Natalie; Deroy, Ophelia

    2013-01-01

    According to a popular family of hypotheses, crossmodal matches between distinct features hold because they correspond to the same polarity on several conceptual dimensions (such as active–passive, good–bad, etc.) that can be identified using the semantic differential technique. The main problem here resides in turning this hypothesis into testable empirical predictions. In the present study, we outline a series of plausible consequences of the hypothesis and test a variety of well-established and previously untested crossmodal correspondences by means of a novel internet-based testing methodology. The results highlight that the semantic hypothesis cannot easily explain differences in the prevalence of crossmodal associations built on the same semantic pattern (fast lemons, slow prunes, sour boulders, heavy red); furthermore, the semantic hypothesis only minimally predicts what happens when the semantic dimensions and polarities that are supposed to drive such crossmodal associations are made more salient (e.g., by adding emotional cues that ought to make the good/bad dimension more salient); finally, the semantic hypothesis does not explain why reliable matches are no longer observed once intramodal dimensions with congruent connotations are presented (e.g., visually presented shapes and colour do not appear to correspond). PMID:24349696

  14. Fast temporal phase unwrapping method for the fringe reflection technique based on the orthogonal grid fringes.

    PubMed

    Li, Bo; Ma, Suodong; Zhai, Yang

    2015-07-10

    In traditional temporal phase unwrapping (TPU) algorithms, wrapped phases with different spatial frequencies are obtained from several groups of phase shift fringes to calculate the unwrapped phase. Therefore, the necessary quantity of captured fringes is very large, especially for the fringe reflection technique (FRT), since a pair of phases should be unwrapped to get the slopes of two perpendicular directions. In this paper, we propose a fast TPU algorithm based on the orthogonal grid fringes by which only one image is needed to extract the two integer phases for each frequency instead of two groups of phase shift fringes, and then they can be added into the wrapped phases separately to complete the unwrapping. There are ridge errors in the direct unwrapped phases, but they are significantly suppressed by our pseudo-phase-shift strategy without any extra captured fringes. The proposed method is robust and effective where the fringe amount used for unwrapping is only 1/4 of the previous similar algorithm and 1/6-1/8 of the traditional TPU methods. The detailed comparison of measurement time is also given, which demonstrate that the FRT measurement can be accelerated in most cases by our method. The algorithm is validated by the experiments, which still works well for the severely defocusing fringes or complex specimen. PMID:26193405

  15. A Fast Framework for Abrupt Change Detection Based on Binary Search Trees and Kolmogorov Statistic

    PubMed Central

    Qi, Jin-Peng; Qi, Jie; Zhang, Qing

    2016-01-01

    Change-Point (CP) detection has attracted considerable attention in the fields of data mining and statistics; it is very meaningful to discuss how to quickly and efficiently detect abrupt change from large-scale bioelectric signals. Currently, most of the existing methods, like Kolmogorov-Smirnov (KS) statistic and so forth, are time-consuming, especially for large-scale datasets. In this paper, we propose a fast framework for abrupt change detection based on binary search trees (BSTs) and a modified KS statistic, named BSTKS (binary search trees and Kolmogorov statistic). In this method, first, two binary search trees, termed as BSTcA and BSTcD, are constructed by multilevel Haar Wavelet Transform (HWT); second, three search criteria are introduced in terms of the statistic and variance fluctuations in the diagnosed time series; last, an optimal search path is detected from the root to leaf nodes of two BSTs. The studies on both the synthetic time series samples and the real electroencephalograph (EEG) recordings indicate that the proposed BSTKS can detect abrupt change more quickly and efficiently than KS, t-statistic (t), and Singular-Spectrum Analyses (SSA) methods, with the shortest computation time, the highest hit rate, the smallest error, and the highest accuracy out of four methods. This study suggests that the proposed BSTKS is very helpful for useful information inspection on all kinds of bioelectric time series signals. PMID:27413364

  16. A fast thermal-curing nanoimprint resist based on cationic polymerizable epoxysiloxane

    PubMed Central

    2012-01-01

    We synthesized a series of epoxysiloxane oligomers with controllable viscosity and polarity and developed upon them a thermal-curable nanoimprint resist that was cross-linked in air at 110°C within 30 s if preexposed to UV light. The oligomers were designed and synthesized via hydrosilylation of 4-vinyl-cyclohexane-1,2-epoxide with poly(methylhydrosiloxane) with tunable viscosity, polarity, and cross-linking density. The resist exhibits excellent chemical and physical properties such as insensitivity toward oxygen, strong mechanical strength, and high etching resistance. Using this resist, nanoscale patterns of different geometries with feature sizes as small as 30 nm were fabricated via a nanoimprint process based on UV-assisted thermal curing. The curing time for the resist was on the order of 10 s at a moderate temperature with the help of UV light preexposure. This fast thermal curing speed was attributed to the large number of active cations generated upon UV exposure that facilitated the thermal polymerization process. PMID:22775987

  17. Fast Multipole Method for Coulomb Interaction Based on Traceless Totally Symmetric Tensor

    NASA Astrophysics Data System (ADS)

    Huang, He; Li, Rui; Chen, Jie; Luo, Li-Shi; Zhang, He

    2015-04-01

    The fast multipole method (FMM) is widely used to calculate the Coulomb interaction between a huge amount of charged particles. The efficiency of FMM scales with O(N) for N particles with any arbitrary distribution. Hence it is apposite for problems with complicated charge distribution or geometry. Under the same FMM framework, there are different approaches, such as using spherical harmonic functions or Maxwell Cartesian tensors. Here we will present a version using traceless totally symmetric Maxwell Cartesian tensor. The previous Maxwell Cartesian tensor based FMM uses totally symmetric tensor. There are (n + 1)(n + 2) / 2 independent elements in a rank n totally symmetric tensor. However, there are only 2 n + 1 independent elements in a rank n traceless totally symmetric tensor, due to which the efficiency of the traceless version is highly improved compared with the old version, especially when high accuracy is needed and high rank tensors are used. Work supported by the Department of Energy, Laboratory Directed Research and Development Funding, under Contract No. DE-AC05-06OR23177.

  18. Fast Contour-Tracing Algorithm Based on a Pixel-Following Method for Image Sensors

    PubMed Central

    Seo, Jonghoon; Chae, Seungho; Shim, Jinwook; Kim, Dongchul; Cheong, Cheolho; Han, Tack-Don

    2016-01-01

    Contour pixels distinguish objects from the background. Tracing and extracting contour pixels are widely used for smart/wearable image sensor devices, because these are simple and useful for detecting objects. In this paper, we present a novel contour-tracing algorithm for fast and accurate contour following. The proposed algorithm classifies the type of contour pixel, based on its local pattern. Then, it traces the next contour using the previous pixel’s type. Therefore, it can classify the type of contour pixels as a straight line, inner corner, outer corner and inner-outer corner, and it can extract pixels of a specific contour type. Moreover, it can trace contour pixels rapidly because it can determine the local minimal path using the contour case. In addition, the proposed algorithm is capable of the compressing data of contour pixels using the representative points and inner-outer corner points, and it can accurately restore the contour image from the data. To compare the performance of the proposed algorithm to that of conventional techniques, we measure their processing time and accuracy. In the experimental results, the proposed algorithm shows better performance compared to the others. Furthermore, it can provide the compressed data of contour pixels and restore them accurately, including the inner-outer corner, which cannot be restored using conventional algorithms. PMID:27005632

  19. Fast terahertz optoelectronic amplitude modulator based on plasmonic metamaterial antenna arrays and graphene

    NASA Astrophysics Data System (ADS)

    Jessop, David S.; Sol, Christian W. O.; Xiao, Long; Kindness, Stephen J.; Braeuninger-Weimer, Philipp; Lin, Hungyen; Griffiths, Jonathan P.; Ren, Yuan; Kamboj, Varun S.; Hofmann, Stephan; Zeitler, J. Axel; Beere, Harvey E.; Ritchie, David A.; Degl'Innocenti, Riccardo

    2016-02-01

    The growing interest in terahertz (THz) technologies in recent years has seen a wide range of demonstrated applications, spanning from security screening, non-destructive testing, gas sensing, to biomedical imaging and communication. Communication with THz radiation offers the advantage of much higher bandwidths than currently available, in an unallocated spectrum. For this to be realized, optoelectronic components capable of manipulating THz radiation at high speeds and high signal-to-noise ratios must be developed. In this work we demonstrate a room temperature frequency dependent optoelectronic amplitude modulator working at around 2 THz, which incorporates graphene as the tuning medium. The architecture of the modulator is an array of plasmonic dipole antennas surrounded by graphene. By electrostatically doping the graphene via a back gate electrode, the reflection characteristics of the modulator are modified. The modulator is electrically characterized to determine the graphene conductivity and optically characterization, by THz time-domain spectroscopy and a single-mode 2 THz quantum cascade laser, to determine the optical modulation depth and cut-off frequency. A maximum optical modulation depth of ~ 30% is estimated and is found to be most (least) sensitive when the electrical modulation is centered at the point of maximum (minimum) differential resistivity of the graphene. A 3 dB cut-off frequency > 5 MHz, limited only by the area of graphene on the device, is reported. The results agree well with theoretical calculations and numerical simulations, and demonstrate the first steps towards ultra-fast, graphene based THz optoelectronic devices.

  20. A Fast Hyperplane-Based Minimum-Volume Enclosing Simplex Algorithm for Blind Hyperspectral Unmixing

    NASA Astrophysics Data System (ADS)

    Lin, Chia-Hsiang; Chi, Chong-Yung; Wang, Yu-Hsiang; Chan, Tsung-Han

    2016-04-01

    Hyperspectral unmixing (HU) is a crucial signal processing procedure to identify the underlying materials (or endmembers) and their corresponding proportions (or abundances) from an observed hyperspectral scene. A well-known blind HU criterion, advocated by Craig in early 1990's, considers the vertices of the minimum-volume enclosing simplex of the data cloud as good endmember estimates, and it has been empirically and theoretically found effective even in the scenario of no pure pixels. However, such kind of algorithms may suffer from heavy simplex volume computations in numerical optimization, etc. In this work, without involving any simplex volume computations, by exploiting a convex geometry fact that a simplest simplex of N vertices can be defined by N associated hyperplanes, we propose a fast blind HU algorithm, for which each of the N hyperplanes associated with the Craig's simplex of N vertices is constructed from N-1 affinely independent data pixels, together with an endmember identifiability analysis for its performance support. Without resorting to numerical optimization, the devised algorithm searches for the N(N-1) active data pixels via simple linear algebraic computations, accounting for its computational efficiency. Monte Carlo simulations and real data experiments are provided to demonstrate its superior efficacy over some benchmark Craig-criterion-based algorithms in both computational efficiency and estimation accuracy.

  1. Support vector machine based classification of fast Fourier transform spectroscopy of proteins

    NASA Astrophysics Data System (ADS)

    Lazarevic, Aleksandar; Pokrajac, Dragoljub; Marcano, Aristides; Melikechi, Noureddine

    2009-02-01

    Fast Fourier transform spectroscopy has proved to be a powerful method for study of the secondary structure of proteins since peak positions and their relative amplitude are affected by the number of hydrogen bridges that sustain this secondary structure. However, to our best knowledge, the method has not been used yet for identification of proteins within a complex matrix like a blood sample. The principal reason is the apparent similarity of protein infrared spectra with actual differences usually masked by the solvent contribution and other interactions. In this paper, we propose a novel machine learning based method that uses protein spectra for classification and identification of such proteins within a given sample. The proposed method uses principal component analysis (PCA) to identify most important linear combinations of original spectral components and then employs support vector machine (SVM) classification model applied on such identified combinations to categorize proteins into one of given groups. Our experiments have been performed on the set of four different proteins, namely: Bovine Serum Albumin, Leptin, Insulin-like Growth Factor 2 and Osteopontin. Our proposed method of applying principal component analysis along with support vector machines exhibits excellent classification accuracy when identifying proteins using their infrared spectra.

  2. Fast Contour-Tracing Algorithm Based on a Pixel-Following Method for Image Sensors.

    PubMed

    Seo, Jonghoon; Chae, Seungho; Shim, Jinwook; Kim, Dongchul; Cheong, Cheolho; Han, Tack-Don

    2016-01-01

    Contour pixels distinguish objects from the background. Tracing and extracting contour pixels are widely used for smart/wearable image sensor devices, because these are simple and useful for detecting objects. In this paper, we present a novel contour-tracing algorithm for fast and accurate contour following. The proposed algorithm classifies the type of contour pixel, based on its local pattern. Then, it traces the next contour using the previous pixel's type. Therefore, it can classify the type of contour pixels as a straight line, inner corner, outer corner and inner-outer corner, and it can extract pixels of a specific contour type. Moreover, it can trace contour pixels rapidly because it can determine the local minimal path using the contour case. In addition, the proposed algorithm is capable of the compressing data of contour pixels using the representative points and inner-outer corner points, and it can accurately restore the contour image from the data. To compare the performance of the proposed algorithm to that of conventional techniques, we measure their processing time and accuracy. In the experimental results, the proposed algorithm shows better performance compared to the others. Furthermore, it can provide the compressed data of contour pixels and restore them accurately, including the inner-outer corner, which cannot be restored using conventional algorithms. PMID:27005632

  3. GPU-based beamformer: fast realization of plane wave compounding and synthetic aperture imaging.

    PubMed

    Yiu, Billy Y S; Tsang, Ivan K H; Yu, Alfred C H

    2011-08-01

    Although they show potential to improve ultrasound image quality, plane wave (PW) compounding and synthetic aperture (SA) imaging are computationally demanding and are known to be challenging to implement in real-time. In this work, we have developed a novel beamformer architecture with the real-time parallel processing capacity needed to enable fast realization of PW compounding and SA imaging. The beamformer hardware comprises an array of graphics processing units (GPUs) that are hosted within the same computer workstation. Their parallel computational resources are controlled by a pixel-based software processor that includes the operations of analytic signal conversion, delay-and-sum beamforming, and recursive compounding as required to generate images from the channel-domain data samples acquired using PW compounding and SA imaging principles. When using two GTX-480 GPUs for beamforming and one GTX-470 GPU for recursive compounding, the beamformer can compute compounded 512 x 255 pixel PW and SA images at throughputs of over 4700 fps and 3000 fps, respectively, for imaging depths of 5 cm and 15 cm (32 receive channels, 40 MHz sampling rate). Its processing capacity can be further increased if additional GPUs or more advanced models of GPU are used. PMID:21859591

  4. A fast weak motif-finding algorithm based on community detection in graphs

    PubMed Central

    2013-01-01

    Background Identification of transcription factor binding sites (also called ‘motif discovery’) in DNA sequences is a basic step in understanding genetic regulation. Although many successful programs have been developed, the problem is far from being solved on account of diversity in gene expression/regulation and the low specificity of binding sites. State-of-the-art algorithms have their own constraints (e.g., high time or space complexity for finding long motifs, low precision in identification of weak motifs, or the OOPS constraint: one occurrence of the motif instance per sequence) which limit their scope of application. Results In this paper, we present a novel and fast algorithm we call TFBSGroup. It is based on community detection from a graph and is used to discover long and weak (l,d) motifs under the ZOMOPS constraint (zero, one or multiple occurrence(s) of the motif instance(s) per sequence), where l is the length of a motif and d is the maximum number of mutations between a motif instance and the motif itself. Firstly, TFBSGroup transforms the (l, d) motif search in sequences to focus on the discovery of dense subgraphs within a graph. It identifies these subgraphs using a fast community detection method for obtaining coarse-grained candidate motifs. Next, it greedily refines these candidate motifs towards the true motif within their own communities. Empirical studies on synthetic (l, d) samples have shown that TFBSGroup is very efficient (e.g., it can find true (18, 6), (24, 8) motifs within 30 seconds). More importantly, the algorithm has succeeded in rapidly identifying motifs in a large data set of prokaryotic promoters generated from the Escherichia coli database RegulonDB. The algorithm has also accurately identified motifs in ChIP-seq data sets for 12 mouse transcription factors involved in ES cell pluripotency and self-renewal. Conclusions Our novel heuristic algorithm, TFBSGroup, is able to quickly identify nearly exact matches for long

  5. FAST: FAST Analysis of Sequences Toolbox.

    PubMed

    Lawrence, Travis J; Kauffman, Kyle T; Amrine, Katherine C H; Carper, Dana L; Lee, Raymond S; Becich, Peter J; Canales, Claudia J; Ardell, David H

    2015-01-01

    FAST (FAST Analysis of Sequences Toolbox) provides simple, powerful open source command-line tools to filter, transform, annotate and analyze biological sequence data. Modeled after the GNU (GNU's Not Unix) Textutils such as grep, cut, and tr, FAST tools such as fasgrep, fascut, and fastr make it easy to rapidly prototype expressive bioinformatic workflows in a compact and generic command vocabulary. Compact combinatorial encoding of data workflows with FAST commands can simplify the documentation and reproducibility of bioinformatic protocols, supporting better transparency in biological data science. Interface self-consistency and conformity with conventions of GNU, Matlab, Perl, BioPerl, R, and GenBank help make FAST easy and rewarding to learn. FAST automates numerical, taxonomic, and text-based sorting, selection and transformation of sequence records and alignment sites based on content, index ranges, descriptive tags, annotated features, and in-line calculated analytics, including composition and codon usage. Automated content- and feature-based extraction of sites and support for molecular population genetic statistics make FAST useful for molecular evolutionary analysis. FAST is portable, easy to install and secure thanks to the relative maturity of its Perl and BioPerl foundations, with stable releases posted to CPAN. Development as well as a publicly accessible Cookbook and Wiki are available on the FAST GitHub repository at https://github.com/tlawrence3/FAST. The default data exchange format in FAST is Multi-FastA (specifically, a restriction of BioPerl FastA format). Sanger and Illumina 1.8+ FastQ formatted files are also supported. FAST makes it easier for non-programmer biologists to interactively investigate and control biological data at the speed of thought. PMID:26042145

  6. FAST: FAST Analysis of Sequences Toolbox

    PubMed Central

    Lawrence, Travis J.; Kauffman, Kyle T.; Amrine, Katherine C. H.; Carper, Dana L.; Lee, Raymond S.; Becich, Peter J.; Canales, Claudia J.; Ardell, David H.

    2015-01-01

    FAST (FAST Analysis of Sequences Toolbox) provides simple, powerful open source command-line tools to filter, transform, annotate and analyze biological sequence data. Modeled after the GNU (GNU's Not Unix) Textutils such as grep, cut, and tr, FAST tools such as fasgrep, fascut, and fastr make it easy to rapidly prototype expressive bioinformatic workflows in a compact and generic command vocabulary. Compact combinatorial encoding of data workflows with FAST commands can simplify the documentation and reproducibility of bioinformatic protocols, supporting better transparency in biological data science. Interface self-consistency and conformity with conventions of GNU, Matlab, Perl, BioPerl, R, and GenBank help make FAST easy and rewarding to learn. FAST automates numerical, taxonomic, and text-based sorting, selection and transformation of sequence records and alignment sites based on content, index ranges, descriptive tags, annotated features, and in-line calculated analytics, including composition and codon usage. Automated content- and feature-based extraction of sites and support for molecular population genetic statistics make FAST useful for molecular evolutionary analysis. FAST is portable, easy to install and secure thanks to the relative maturity of its Perl and BioPerl foundations, with stable releases posted to CPAN. Development as well as a publicly accessible Cookbook and Wiki are available on the FAST GitHub repository at https://github.com/tlawrence3/FAST. The default data exchange format in FAST is Multi-FastA (specifically, a restriction of BioPerl FastA format). Sanger and Illumina 1.8+ FastQ formatted files are also supported. FAST makes it easier for non-programmer biologists to interactively investigate and control biological data at the speed of thought. PMID:26042145

  7. A surface-acoustic-wave-based cantilever bio-sensor.

    PubMed

    De Simoni, Giorgio; Signore, Giovanni; Agostini, Matteo; Beltram, Fabio; Piazza, Vincenzo

    2015-06-15

    A scalable surface-acoustic-wave- (SAW-) based cantilevered device for portable bio-chemical sensing applications is presented. Even in the current, proof-of-principle implementation this architecture is shown to outperform commercial quartz-crystal microbalances in terms of sensitivity. Adhesion of analytes on a functionalized surface of the cantilever shifts the resonant frequency of a SAW-generating transducer due to the stress-induced variation of the speed of surface acoustic modes. We discuss the relevance of this approach for diagnostics applications based on miniaturized devices. PMID:25643594

  8. Deformation-based surface morphometry applied to gray matter deformation.

    PubMed

    Chung, Moo K; Worsley, Keith J; Robbins, Steve; Paus, Tomás; Taylor, Jonathan; Giedd, Jay N; Rapoport, Judith L; Evans, Alan C

    2003-02-01

    We present a unified statistical approach to deformation-based morphometry applied to the cortical surface. The cerebral cortex has the topology of a 2D highly convoluted sheet. As the brain develops over time, the cortical surface area, thickness, curvature, and total gray matter volume change. It is highly likely that such age-related surface changes are not uniform. By measuring how such surface metrics change over time, the regions of the most rapid structural changes can be localized. We avoided using surface flattening, which distorts the inherent geometry of the cortex in our analysis and it is only used in visualization. To increase the signal to noise ratio, diffusion smoothing, which generalizes Gaussian kernel smoothing to an arbitrary curved cortical surface, has been developed and applied to surface data. Afterward, statistical inference on the cortical surface will be performed via random fields theory. As an illustration, we demonstrate how this new surface-based morphometry can be applied in localizing the cortical regions of the gray matter tissue growth and loss in the brain images longitudinally collected in the group of children and adolescents. PMID:12595176

  9. Fast valve based on double-layer eddy-current repulsion for disruption mitigation in Experimental Advanced Superconducting Tokamak

    NASA Astrophysics Data System (ADS)

    Zhuang, H. D.; Zhang, X. D.

    2015-05-01

    A fast valve based on the double-layer eddy-current repulsion mechanism has been developed on Experimental Advanced Superconducting Tokamak (EAST). In addition to a double-layer eddy-current coil, a preload system was added to improve the security of the valve, whereby the valve opens more quickly and the open-valve time becomes shorter, making it much safer than before. In this contribution, testing platforms, open-valve characteristics, and throughput of the fast valve are discussed. Tests revealed that by choosing appropriate parameters the valve opened within 0.15 ms, and open-valve times were no longer than 2 ms. By adjusting working parameter values, the maximum number of particles injected during this open-valve time was estimated at 7 × 1022. The fast valve will become a useful tool to further explore disruption mitigation experiments on EAST in 2015.

  10. Fast volumetric imaging with patterned illumination via digital micro-mirror device-based temporal focusing multiphoton microscopy

    PubMed Central

    Chang, Chia-Yuan; Hu, Yvonne Yuling; Lin, Chun-Yu; Lin, Cheng-Han; Chang, Hsin-Yu; Tsai, Sheng-Feng; Lin, Tzu-Wei; Chen, Shean-Jen

    2016-01-01

    Temporal focusing multiphoton microscopy (TFMPM) has the advantage of area excitation in an axial confinement of only a few microns; hence, it can offer fast three-dimensional (3D) multiphoton imaging. Herein, fast volumetric imaging via a developed digital micromirror device (DMD)-based TFMPM has been realized through the synchronization of an electron multiplying charge-coupled device (EMCCD) with a dynamic piezoelectric stage for axial scanning. The volumetric imaging rate can achieve 30 volumes per second according to the EMCCD frame rate of more than 400 frames per second, which allows for the 3D Brownian motion of one-micron fluorescent beads to be spatially observed. Furthermore, it is demonstrated that the dynamic HiLo structural multiphoton microscope can reject background noise by way of the fast volumetric imaging with high-speed DMD patterned illumination. PMID:27231617

  11. Fast volumetric imaging with patterned illumination via digital micro-mirror device-based temporal focusing multiphoton microscopy.

    PubMed

    Chang, Chia-Yuan; Hu, Yvonne Yuling; Lin, Chun-Yu; Lin, Cheng-Han; Chang, Hsin-Yu; Tsai, Sheng-Feng; Lin, Tzu-Wei; Chen, Shean-Jen

    2016-05-01

    Temporal focusing multiphoton microscopy (TFMPM) has the advantage of area excitation in an axial confinement of only a few microns; hence, it can offer fast three-dimensional (3D) multiphoton imaging. Herein, fast volumetric imaging via a developed digital micromirror device (DMD)-based TFMPM has been realized through the synchronization of an electron multiplying charge-coupled device (EMCCD) with a dynamic piezoelectric stage for axial scanning. The volumetric imaging rate can achieve 30 volumes per second according to the EMCCD frame rate of more than 400 frames per second, which allows for the 3D Brownian motion of one-micron fluorescent beads to be spatially observed. Furthermore, it is demonstrated that the dynamic HiLo structural multiphoton microscope can reject background noise by way of the fast volumetric imaging with high-speed DMD patterned illumination. PMID:27231617

  12. Fast valve based on double-layer eddy-current repulsion for disruption mitigation in Experimental Advanced Superconducting Tokamak.

    PubMed

    Zhuang, H D; Zhang, X D

    2015-05-01

    A fast valve based on the double-layer eddy-current repulsion mechanism has been developed on Experimental Advanced Superconducting Tokamak (EAST). In addition to a double-layer eddy-current coil, a preload system was added to improve the security of the valve, whereby the valve opens more quickly and the open-valve time becomes shorter, making it much safer than before. In this contribution, testing platforms, open-valve characteristics, and throughput of the fast valve are discussed. Tests revealed that by choosing appropriate parameters the valve opened within 0.15 ms, and open-valve times were no longer than 2 ms. By adjusting working parameter values, the maximum number of particles injected during this open-valve time was estimated at 7 × 10(22). The fast valve will become a useful tool to further explore disruption mitigation experiments on EAST in 2015. PMID:26026520

  13. Evaluation and application of a fast module in a PLC based interlock and control system

    NASA Astrophysics Data System (ADS)

    Zaera-Sanz, M.

    2009-08-01

    The LHC Beam Interlock system requires a controller performing a simple matrix function to collect the different beam dump requests. To satisfy the expected safety level of the Interlock, the system should be robust and reliable. The PLC is a promising candidate to fulfil both aspects but too slow to meet the expected response time which is of the order of μseconds. Siemens has introduced a ``so called'' fast module (FM352-5 Boolean Processor). It provides independent and extremely fast control of a process within a larger control system using an onboard processor, a Field Programmable Gate Array (FPGA), to execute code in parallel which results in extremely fast scan times. It is interesting to investigate its features and to evaluate it as a possible candidate for the beam interlock system. This paper publishes the results of this study. As well, this paper could be useful for other applications requiring fast processing using a PLC.

  14. A fast color image enhancement algorithm based on Max Intensity Channel.

    PubMed

    Sun, Wei; Han, Long; Guo, Baolong; Jia, Wenyan; Sun, Mingui

    2014-03-30

    In this paper, we extend image enhancement techniques based on the retinex theory imitating human visual perception of scenes containing high illumination variations. This extension achieves simultaneous dynamic range modification, color consistency, and lightness rendition without multi-scale Gaussian filtering which has a certain halo effect. The reflection component is analyzed based on the illumination and reflection imaging model. A new prior named Max Intensity Channel (MIC) is implemented assuming that the reflections of some points in the scene are very high in at least one color channel. Using this prior, the illumination of the scene is obtained directly by performing a gray-scale closing operation and a fast cross-bilateral filtering on the MIC of the input color image. Consequently, the reflection component of each RGB color channel can be determined from the illumination and reflection imaging model. The proposed algorithm estimates the illumination component which is relatively smooth and maintains the edge details in different regions. A satisfactory color rendition is achieved for a class of images that do not satisfy the gray-world assumption implicit to the theoretical foundation of the retinex. Experiments are carried out to compare the new method with several spatial and transform domain methods. Our results indicate that the new method is superior in enhancement applications, improves computation speed, and performs well for images with high illumination variations than other methods. Further comparisons of images from National Aeronautics and Space Administration and a wearable camera eButton have shown a high performance of the new method with better color restoration and preservation of image details. PMID:25110395

  15. A fast color image enhancement algorithm based on Max Intensity Channel

    PubMed Central

    Sun, Wei; Han, Long; Guo, Baolong; Jia, Wenyan; Sun, Mingui

    2014-01-01

    In this paper, we extend image enhancement techniques based on the retinex theory imitating human visual perception of scenes containing high illumination variations. This extension achieves simultaneous dynamic range modification, color consistency, and lightness rendition without multi-scale Gaussian filtering which has a certain halo effect. The reflection component is analyzed based on the illumination and reflection imaging model. A new prior named Max Intensity Channel (MIC) is implemented assuming that the reflections of some points in the scene are very high in at least one color channel. Using this prior, the illumination of the scene is obtained directly by performing a gray-scale closing operation and a fast cross-bilateral filtering on the MIC of the input color image. Consequently, the reflection component of each RGB color channel can be determined from the illumination and reflection imaging model. The proposed algorithm estimates the illumination component which is relatively smooth and maintains the edge details in different regions. A satisfactory color rendition is achieved for a class of images that do not satisfy the gray-world assumption implicit to the theoretical foundation of the retinex. Experiments are carried out to compare the new method with several spatial and transform domain methods. Our results indicate that the new method is superior in enhancement applications, improves computation speed, and performs well for images with high illumination variations than other methods. Further comparisons of images from National Aeronautics and Space Administration and a wearable camera eButton have shown a high performance of the new method with better color restoration and preservation of image details. PMID:25110395

  16. A combinatorial chemistry method for fast screening of perovskite-based NO oxidation catalyst.

    PubMed

    Yoon, Dal Young; Lim, Eunho; Kim, Young Jin; Cho, Byong K; Nam, In-Sik; Choung, Jin Woo; Yoo, Seungbeom

    2014-11-10

    A fast parallel screening method based on combinatorial chemistry (combichem) has been developed and applied in the screening tests of perovskite-based oxide (PBO) catalysts for NO oxidation to hit a promising PBO formulation for the oxidation of NO to NO2. This new method involves three consecutive steps: oxidation of NO to NO2 over a PBO catalyst, adsorption of NOx onto the PBO and K2O/Al2O3, and colorimetric assay of the NOx adsorbed thereon. The combichem experimental data have been used for determining the oxidation activity of NO over PBO catalysts as well as three critical parameters, such as the adsorption efficiency of K2O/Al2O3 for NO2 (α) and NO (β), and the time-average fraction of NO included in the NOx feed stream (ξ). The results demonstrated that the amounts of NO2 produced over PBO catalysts by the combichem method under transient conditions correlate well with those from a conventional packed-bed reactor under steady-state conditions. Among the PBO formulations examined, La0.5Ag0.5MnO3 has been identified as the best chemical formulation for oxidation of NO to NO2 by the present combichem method and also confirmed by the conventional packed-bed reactor tests. The superior efficiency of the combichem method for high-throughput catalyst screening test validated in this study is particularly suitable for saving the time and resources required in developing a new formulation of PBO catalyst whose chemical composition may have an enormous number of possible variations. PMID:25321326

  17. Retrieval of Areal-averaged Spectral Surface Albedo from Transmission Data Alone: Computationally Simple and Fast Approach

    SciTech Connect

    Kassianov, Evgueni I.; Barnard, James C.; Flynn, Connor J.; Riihimaki, Laura D.; Michalsky, Joseph; Hodges, G. B.

    2014-10-25

    We introduce and evaluate a simple retrieval of areal-averaged surface albedo using ground-based measurements of atmospheric transmission alone at five wavelengths (415, 500, 615, 673 and 870nm), under fully overcast conditions. Our retrieval is based on a one-line semi-analytical equation and widely accepted assumptions regarding the weak spectral dependence of cloud optical properties, such as cloud optical depth and asymmetry parameter, in the visible and near-infrared spectral range. To illustrate the performance of our retrieval, we use as input measurements of spectral atmospheric transmission from Multi-Filter Rotating Shadowband Radiometer (MFRSR). These MFRSR data are collected at two well-established continental sites in the United States supported by the U.S. Department of Energy’s (DOE’s) Atmospheric Radiation Measurement (ARM) Program and National Oceanic and Atmospheric Administration (NOAA). The areal-averaged albedos obtained from the MFRSR are compared with collocated and coincident Moderate Resolution Imaging Spectroradiometer (MODIS) white-sky albedo. In particular, these comparisons are made at four MFRSR wavelengths (500, 615, 673 and 870nm) and for four seasons (winter, spring, summer and fall) at the ARM site using multi-year (2008-2013) MFRSR and MODIS data. Good agreement, on average, for these wavelengths results in small values (≤0.01) of the corresponding root mean square errors (RMSEs) for these two sites. The obtained RMSEs are comparable with those obtained previously for the shortwave albedos (MODIS-derived versus tower-measured) for these sites during growing seasons. We also demonstrate good agreement between tower-based daily-averaged surface albedos measured for “nearby” overcast and non-overcast days. Thus, our retrieval originally developed for overcast conditions likely can be extended for non-overcast days by interpolating between overcast retrievals.

  18. Retrieval of areal-averaged spectral surface albedo from transmission data alone: computationally simple and fast approach

    NASA Astrophysics Data System (ADS)

    Kassianov, Evgueni; Barnard, James; Flynn, Connor; Riihimaki, Laura; Michalsky, Joseph J.; Hodges, Gary

    2014-10-01

    We introduce and evaluate a simple retrieval of areal-averaged surface albedo using ground-based measurements of atmospheric transmission alone at five wavelengths (415, 500, 615, 673 and 870nm), under fully overcast conditions. Our retrieval is based on a one-line semi-analytical equation and widely accepted assumptions regarding the weak spectral dependence of cloud optical properties, such as cloud optical depth and asymmetry parameter, in the visible and near-infrared spectral range. To illustrate the performance of our retrieval, we use as input measurements of spectral atmospheric transmission from the Multi-Filter Rotating Shadowband Radiometer (MFRSR). These MFRSR data are collected at two well-established continental sites in the United States supported by the U.S. Department of Energy's (DOE's) Atmospheric Radiation Measurement (ARM) Program and National Oceanic and Atmospheric Administration (NOAA). The areal-averaged albedos obtained from the MFRSR are compared with collocated and coincident Moderate Resolution Imaging Spectroradiometer (MODIS) white-sky albedo. In particular, these comparisons are made at four MFRSR wavelengths (500, 615, 673 and 870nm) and for four seasons (winter, spring, summer and fall) at the ARM site using multi-year (2008-2013) MFRSR and MODIS data. Good agreement, on average, for these wavelengths results in small values (≤0.015) of the corresponding root mean square errors (RMSEs) for these two sites. The obtained RMSEs are comparable with those obtained previously for the shortwave albedos (MODIS-derived versus tower-measured) for these sites during growing seasons. We also demonstrate good agreement between tower-based daily-averaged surface albedos measured for "nearby" overcast and non-overcast days. Thus, our retrieval originally developed for overcast conditions likely can be extended for non-overcast days by interpolating between overcast retrievals.

  19. Fast assembling microarrays of superparamagnetic Fe3O4@Au nanoparticle clusters as reproducible substrates for surface-enhanced Raman scattering

    NASA Astrophysics Data System (ADS)

    Ye, Min; Wei, Zewen; Hu, Fei; Wang, Jianxin; Ge, Guanglu; Hu, Zhiyuan; Shao, Mingwang; Lee, Shuit-Tong; Liu, Jian

    2015-08-01

    It is currently a very active research area to develop new types of substrates which integrate various nanomaterials for surface-enhanced Raman scattering (SERS) techniques. Here we report a unique approach to prepare SERS substrates with reproducible performance. It features silicon mold-assisted magnetic assembling of superparamagnetic Fe3O4@Au nanoparticle clusters (NCs) into arrayed microstructures on a wafer scale. This approach enables the fabrication of both silicon-based and hydrogel-based substrates in a sequential manner. We have demonstrated that strong SERS signals can be harvested from these substrates due to an efficient coupling effect between Fe3O4@Au NCs, with enhancement factors >106. These substrates have been confirmed to provide reproducible SERS signals, with low variations in different locations or batches of samples. We investigate the spatial distributions of electromagnetic field enhancement around Fe3O4@Au NCs assemblies using finite-difference-time-domain (FDTD) simulations. The procedure to prepare the substrates is straightforward and fast. The silicon mold can be easily cleaned out and refilled with Fe3O4@Au NCs assisted by a magnet, therefore being re-useable for many cycles. Our approach has integrated microarray technologies and provided a platform for thousands of independently addressable SERS detection, in order to meet the requirements of a rapid, robust, and high throughput performance.It is currently a very active research area to develop new types of substrates which integrate various nanomaterials for surface-enhanced Raman scattering (SERS) techniques. Here we report a unique approach to prepare SERS substrates with reproducible performance. It features silicon mold-assisted magnetic assembling of superparamagnetic Fe3O4@Au nanoparticle clusters (NCs) into arrayed microstructures on a wafer scale. This approach enables the fabrication of both silicon-based and hydrogel-based substrates in a sequential manner. We have

  20. Determinants of Fast Food Consumption among Iranian High School Students Based on Planned Behavior Theory

    PubMed Central

    Sharifirad, Gholamreza; Yarmohammadi, Parastoo; Azadbakht, Leila; Morowatisharifabad, Mohammad Ali; Hassanzadeh, Akbar

    2013-01-01

    Objective. This study was conducted to identify some factors (beliefs and norms) which are related to fast food consumption among high school students in Isfahan, Iran. We used the framework of the theory planned behavior (TPB) to predict this behavior. Subjects & Methods. Cross-sectional data were available from high school students (n = 521) who were recruited by cluster randomized sampling. All of the students completed a questionnaire assessing variables of standard TPB model including attitude, subjective norms, perceived behavior control (PBC), and the additional variables past behavior, actual behavior control (ABC). Results. The TPB variables explained 25.7% of the variance in intentions with positive attitude as the strongest (β = 0.31, P < 0.001) and subjective norms as the weakest (β = 0.29, P < 0.001) determinant. Concurrently, intentions accounted for 6% of the variance for fast food consumption. Past behavior and ABC accounted for an additional amount of 20.4% of the variance in fast food consumption. Conclusion. Overall, the present study suggests that the TPB model is useful in predicting related beliefs and norms to the fast food consumption among adolescents. Subjective norms in TPB model and past behavior in TPB model with additional variables (past behavior and actual behavior control) were the most powerful predictors of fast food consumption. Therefore, TPB model may be a useful framework for planning intervention programs to reduce fast food consumption by students. PMID:23936635

  1. Surface-based prostate registration with biomechanical regularization

    NASA Astrophysics Data System (ADS)

    van de Ven, Wendy J. M.; Hu, Yipeng; Barentsz, Jelle O.; Karssemeijer, Nico; Barratt, Dean; Huisman, Henkjan J.

    2013-03-01

    Adding MR-derived information to standard transrectal ultrasound (TRUS) images for guiding prostate biopsy is of substantial clinical interest. A tumor visible on MR images can be projected on ultrasound by using MRUS registration. A common approach is to use surface-based registration. We hypothesize that biomechanical modeling will better control deformation inside the prostate than a regular surface-based registration method. We developed a novel method by extending a surface-based registration with finite element (FE) simulation to better predict internal deformation of the prostate. For each of six patients, a tetrahedral mesh was constructed from the manual prostate segmentation. Next, the internal prostate deformation was simulated using the derived radial surface displacement as boundary condition. The deformation field within the gland was calculated using the predicted FE node displacements and thin-plate spline interpolation. We tested our method on MR guided MR biopsy imaging data, as landmarks can easily be identified on MR images. For evaluation of the registration accuracy we used 45 anatomical landmarks located in all regions of the prostate. Our results show that the median target registration error of a surface-based registration with biomechanical regularization is 1.88 mm, which is significantly different from 2.61 mm without biomechanical regularization. We can conclude that biomechanical FE modeling has the potential to improve the accuracy of multimodal prostate registration when comparing it to regular surface-based registration.

  2. Terahertz-optical-asymmetric-demultiplexer (TOAD)-based arithmetic units for ultra-fast optical information processing

    NASA Astrophysics Data System (ADS)

    Cherri, Abdallah K.

    2010-04-01

    In this paper, designs of ultra-fast all-optical based Terahertz-optical-asymmetric-demultiplexer (TOAD)-based devices are reported. Using TOAD switches, adders/subtracters units are demonstrated. The high speed is achieved due to the use of the nonlinear optical materials and the nonbinary modified signed-digit (MSD) number representation. The proposed all-optical circuits are compared in terms of numbers TOAD switches, optical amplifiers and wavelength converters.

  3. Structator: fast index-based search for RNA sequence-structure patterns

    PubMed Central

    2011-01-01

    Background The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching databases for RNAs requires to match sequence-structure patterns. Unfortunately, current tools for this task have, in the best case, a running time that is only linear in the size of sequence databases. Furthermore, established index data structures for fast sequence matching, like suffix trees or arrays, cannot benefit from the complementarity constraints introduced by the secondary structure of RNAs. Results We present a novel method and readily applicable software for time efficient matching of RNA sequence-structure patterns in sequence databases. Our approach is based on affix arrays, a recently introduced index data structure, preprocessed from the target database. Affix arrays support bidirectional pattern search, which is required for efficiently handling the structural constraints of the pattern. Structural patterns like stem-loops can be matched inside out, such that the loop region is matched first and then the pairing bases on the boundaries are matched consecutively. This allows to exploit base pairing information for search space reduction and leads to an expected running time that is sublinear in the size of the sequence database. The incorporation of a new chaining approach in the search of RNA sequence-structure patterns enables the description of molecules folding into complex secondary structures with multiple ordered patterns. The chaining approach removes spurious matches from the set of intermediate results, in particular of patterns with little specificity. In benchmark experiments on the Rfam database, our method runs up to two orders of magnitude faster than previous methods. Conclusions The presented method's sublinear expected running time makes it well suited for RNA sequence-structure pattern matching in large sequence databases. RNA molecules containing several

  4. A real-time surface inspection system for precision steel balls based on machine vision

    NASA Astrophysics Data System (ADS)

    Chen, Yi-Ji; Tsai, Jhy-Cherng; Hsu, Ya-Chen

    2016-07-01

    Precision steel balls are one of the most fundament components for motion and power transmission parts and they are widely used in industrial machinery and the automotive industry. As precision balls are crucial for the quality of these products, there is an urgent need to develop a fast and robust system for inspecting defects of precision steel balls. In this paper, a real-time system for inspecting surface defects of precision steel balls is developed based on machine vision. The developed system integrates a dual-lighting system, an unfolding mechanism and inspection algorithms for real-time signal processing and defect detection. The developed system is tested under feeding speeds of 4 pcs s‑1 with a detection rate of 99.94% and an error rate of 0.10%. The minimum detectable surface flaw area is 0.01 mm2, which meets the requirement for inspecting ISO grade 100 precision steel balls.

  5. Fast self-assembly kinetics of alkanethiols on gold nanoparticles: simulation and characterization by localized surface plasmon resonance spectroscopy

    NASA Astrophysics Data System (ADS)

    Asiaei, Sasan; Denomme, Ryan C.; Marr, Chelsea; Nieva, Patricia M.; Vijayan, Mathilakath M.

    2012-03-01

    This study demonstrates improved kinetics for the formation of self-assembled monolayers (SAMs) of alkanethiols on gold nanoparticle substrates. A computational model was developed to predict SAM growth kinetics. Based on the predictions from the model, SAMs of 11-mercaptoundecanoic acid (11-MUA) and 1-octanethiol (1-OT) were formed by incubation of gold nanoparticle chips in an ethanolic 10 mM solution within 20 min. The performance of this novel rapid SAM formation protocol was compared with a conventional 24 hour incubation protocol. Binding capacity of the alkanethiol SAM was investigated for a 20 min incubation protocol using biotin-streptavidin. For this purpose, the SAM loaded gold nanoparticle chips were modified with 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide (EDC) to allow attachment of EZ-Link amine PEG3 biotin to the 11-MUA molecules. Binding reactions were monitored in real time using localized surface plasmon resonance (LSPR) spectroscopy. The resulting LSPR absorbance peak shift was comparable to the experimental results for biotin-streptavidin reported in literature. Results of this study suggest that formation of a high quality alkanethiol SAM within 20 min on gold nanoparticles surfaces is possible and could greatly reduce the time and cost compared to conventional 24 h incubation protocols.

  6. Surface-Area-Based Attribute Filtering in 3D

    NASA Astrophysics Data System (ADS)

    Kiwanuka, Fred N.; Ouzounis, Georgios K.; Wilkinson, Michael H. F.

    In this paper we describe a rotation-invariant attribute filter based on estimating the sphericity or roundness of objects by efficiently computing surface area and volume of connected components. The method is based on an efficient algorithm to compute all iso-surfaces of all nodes in a Max-Tree. With similar properties to moment-based attributes like sparseness, non-compactness, and elongation, our sphericity attribute can supplement these in finding blood-vessels in time-of-flight MR angiograms. We compare the method to a discrete surface area method based on adjacency, which has been used for urinary stone detection. Though the latter is faster, it is less accurate, and lacks rotation invariance.

  7. A homotopy-based sparse representation for fast and accurate shape prior modeling in liver surgical planning.

    PubMed

    Wang, Guotai; Zhang, Shaoting; Xie, Hongzhi; Metaxas, Dimitris N; Gu, Lixu

    2015-01-01

    Shape prior plays an important role in accurate and robust liver segmentation. However, liver shapes have complex variations and accurate modeling of liver shapes is challenging. Using large-scale training data can improve the accuracy but it limits the computational efficiency. In order to obtain accurate liver shape priors without sacrificing the efficiency when dealing with large-scale training data, we investigate effective and scalable shape prior modeling method that is more applicable in clinical liver surgical planning system. We employed the Sparse Shape Composition (SSC) to represent liver shapes by an optimized sparse combination of shapes in the repository, without any assumptions on parametric distributions of liver shapes. To leverage large-scale training data and improve the computational efficiency of SSC, we also introduced a homotopy-based method to quickly solve the L1-norm optimization problem in SSC. This method takes advantage of the sparsity of shape modeling, and solves the original optimization problem in SSC by continuously transforming it into a series of simplified problems whose solution is fast to compute. When new training shapes arrive gradually, the homotopy strategy updates the optimal solution on the fly and avoids re-computing it from scratch. Experiments showed that SSC had a high accuracy and efficiency in dealing with complex liver shape variations, excluding gross errors and preserving local details on the input liver shape. The homotopy-based SSC had a high computational efficiency, and its runtime increased very slowly when repository's capacity and vertex number rose to a large degree. When repository's capacity was 10,000, with 2000 vertices on each shape, homotopy method cost merely about 11.29 s to solve the optimization problem in SSC, nearly 2000 times faster than interior point method. The dice similarity coefficient (DSC), average symmetric surface distance (ASD), and maximum symmetric surface distance measurement

  8. Fast-Running Aeroelastic Code Based on Unsteady Linearized Aerodynamic Solver Developed

    NASA Technical Reports Server (NTRS)

    Reddy, T. S. R.; Bakhle, Milind A.; Keith, T., Jr.

    2003-01-01

    The NASA Glenn Research Center has been developing aeroelastic analyses for turbomachines for use by NASA and industry. An aeroelastic analysis consists of a structural dynamic model, an unsteady aerodynamic model, and a procedure to couple the two models. The structural models are well developed. Hence, most of the development for the aeroelastic analysis of turbomachines has involved adapting and using unsteady aerodynamic models. Two methods are used in developing unsteady aerodynamic analysis procedures for the flutter and forced response of turbomachines: (1) the time domain method and (2) the frequency domain method. Codes based on time domain methods require considerable computational time and, hence, cannot be used during the design process. Frequency domain methods eliminate the time dependence by assuming harmonic motion and, hence, require less computational time. Early frequency domain analyses methods neglected the important physics of steady loading on the analyses for simplicity. A fast-running unsteady aerodynamic code, LINFLUX, which includes steady loading and is based on the frequency domain method, has been modified for flutter and response calculations. LINFLUX, solves unsteady linearized Euler equations for calculating the unsteady aerodynamic forces on the blades, starting from a steady nonlinear aerodynamic solution. First, we obtained a steady aerodynamic solution for a given flow condition using the nonlinear unsteady aerodynamic code TURBO. A blade vibration analysis was done to determine the frequencies and mode shapes of the vibrating blades, and an interface code was used to convert the steady aerodynamic solution to a form required by LINFLUX. A preprocessor was used to interpolate the mode shapes from the structural dynamic mesh onto the computational dynamics mesh. Then, we used LINFLUX to calculate the unsteady aerodynamic forces for a given mode, frequency, and phase angle. A postprocessor read these unsteady pressures and

  9. Fast Dynamic Simulation-Based Small Signal Stability Assessment and Control

    SciTech Connect

    Acharya, Naresh; Baone, Chaitanya; Veda, Santosh; Dai, Jing; Chaudhuri, Nilanjan; Leonardi, Bruno; Sanches-Gasca, Juan; Diao, Ruisheng; Wu, Di; Huang, Zhenyu; Zhang, Yu; Jin, Shuangshuang; Zheng, Bin; Chen, Yousu

    2014-12-31

    Power grid planning and operation decisions are made based on simulation of the dynamic behavior of the system. Enabling substantial energy savings while increasing the reliability of the aging North American power grid through improved utilization of existing transmission assets hinges on the adoption of wide-area measurement systems (WAMS) for power system stabilization. However, adoption of WAMS alone will not suffice if the power system is to reach its full entitlement in stability and reliability. It is necessary to enhance predictability with "faster than real-time" dynamic simulations that will enable the dynamic stability margins, proactive real-time control, and improve grid resiliency to fast time-scale phenomena such as cascading network failures. Present-day dynamic simulations are performed only during offline planning studies, considering only worst case conditions such as summer peak, winter peak days, etc. With widespread deployment of renewable generation, controllable loads, energy storage devices and plug-in hybrid electric vehicles expected in the near future and greater integration of cyber infrastructure (communications, computation and control), monitoring and controlling the dynamic performance of the grid in real-time would become increasingly important. The state-of-the-art dynamic simulation tools have limited computational speed and are not suitable for real-time applications, given the large set of contingency conditions to be evaluated. These tools are optimized for best performance of single-processor computers, but the simulation is still several times slower than real-time due to its computational complexity. With recent significant advances in numerical methods and computational hardware, the expectations have been rising towards more efficient and faster techniques to be implemented in power system simulators. This is a natural expectation, given that the core solution algorithms of most commercial simulators were developed

  10. A pnCCD-based, fast direct single electron imaging camera for TEM and STEM

    NASA Astrophysics Data System (ADS)

    Ryll, H.; Simson, M.; Hartmann, R.; Holl, P.; Huth, M.; Ihle, S.; Kondo, Y.; Kotula, P.; Liebel, A.; Müller-Caspary, K.; Rosenauer, A.; Sagawa, R.; Schmidt, J.; Soltau, H.; Strüder, L.

    2016-04-01

    We report on a new camera that is based on a pnCCD sensor for applications in scanning transmission electron microscopy. Emerging new microscopy techniques demand improved detectors with regards to readout rate, sensitivity and radiation hardness, especially in scanning mode. The pnCCD is a 2D imaging sensor that meets these requirements. Its intrinsic radiation hardness permits direct detection of electrons. The pnCCD is read out at a rate of 1,150 frames per second with an image area of 264 x 264 pixel. In binning or windowing modes, the readout rate is increased almost linearly, for example to 4000 frames per second at 4× binning (264 x 66 pixel). Single electrons with energies from 300 keV down to 5 keV can be distinguished due to the high sensitivity of the detector. Three applications in scanning transmission electron microscopy are highlighted to demonstrate that the pnCCD satisfies experimental requirements, especially fast recording of 2D images. In the first application, 65536 2D diffraction patterns were recorded in 70 s. STEM images corresponding to intensities of various diffraction peaks were reconstructed. For the second application, the microscope was operated in a Lorentz-like mode. Magnetic domains were imaged in an area of 256 x 256 sample points in less than 37 seconds for a total of 65536 images each with 264 x 132 pixels. Due to information provided by the two-dimensional images, not only the amplitude but also the direction of the magnetic field could be determined. In the third application, millisecond images of a semiconductor nanostructure were recorded to determine the lattice strain in the sample. A speed-up in measurement time by a factor of 200 could be achieved compared to a previously used camera system.

  11. A New Ticket-Based Authentication Mechanism for Fast Handover in Mesh Network.

    PubMed

    Lai, Yan-Ming; Cheng, Pu-Jen; Lee, Cheng-Chi; Ku, Chia-Yi

    2016-01-01

    Due to the ever-growing popularity mobile devices of various kinds have received worldwide, the demands on large-scale wireless network infrastructure development and enhancement have been rapidly swelling in recent years. A mobile device holder can get online at a wireless network access point, which covers a limited area. When the client leaves the access point, there will be a temporary disconnection until he/she enters the coverage of another access point. Even when the coverages of two neighboring access points overlap, there is still work to do to make the wireless connection smoothly continue. The action of one wireless network access point passing a client to another access point is referred to as the handover. During handover, for security concerns, the client and the new access point should perform mutual authentication before any Internet access service is practically gained/provided. If the handover protocol is inefficient, in some cases discontinued Internet service will happen. In 2013, Li et al. proposed a fast handover authentication mechanism for wireless mesh network (WMN) based on tickets. Unfortunately, Li et al.'s work came with some weaknesses. For one thing, some sensitive information such as the time and date of expiration is sent in plaintext, which increases security risks. For another, Li et al.'s protocol includes the use of high-quality tamper-proof devices (TPDs), and this unreasonably high equipment requirement limits its applicability. In this paper, we shall propose a new efficient handover authentication mechanism. The new mechanism offers a higher level of security on a more scalable ground with the client's privacy better preserved. The results of our performance analysis suggest that our new mechanism is superior to some similar mechanisms in terms of authentication delay. PMID:27171160

  12. Fast Reconnection Rates Based on Group Velocity Cones: Whistler Regime and Pair Plasmas

    NASA Astrophysics Data System (ADS)

    Singh, N.

    2009-05-01

    Based on the group velocity vector of the whistler mode, we predict the range of whistler-regime reconnection rate depending on the half width (w) of the current sheet (CS. During the reconnection process electromagnetic perturbations (EMPs) are generated in the localized diffusion region (DR, which acts like an antenna and radiates whistler waves for certain range of CS widths. The reconnection structure (exhaust) is approximately the radiation pattern of the DR antenna and it is determined by the group velocity directions. Since the whistler waves originate from the electromagnetic perturbations (EMPs) localized in the DR, we calculate R over a range of the discrete values of the perpendicular wave number (k'') contained in the Fourier spectrum of the EMPs. We have used such calculations to determine the reconnection rates averaged over the wave number spectrum of a Gaussian shaped EMP as a function of the CS width. We find that has a fairly constant value at ˜ 0.23 for CS widths in the range 0.4 < w/di ˜ 1 and for w < 0.3di it decreases with decreasing w and it attains a value ˜ 0.06 in an extremely thin CS with w ˜ 0.05di, where di is the ion skin depth. We compare the values of and R with those found from simulations and experiments, and find them in good agreement. We also report the properties of the whistler waves radiated from the DR into the exhaust region. We also demonstrate that our theoretical method developed for whistler regime reconnection could be easily adopted to predict fast reconnection rates in pair plasmas, which support inertial Alfven waves.

  13. A New Ticket-Based Authentication Mechanism for Fast Handover in Mesh Network

    PubMed Central

    Lai, Yan-Ming; Cheng, Pu-Jen; Lee, Cheng-Chi; Ku, Chia-Yi

    2016-01-01

    Due to the ever-growing popularity mobile devices of various kinds have received worldwide, the demands on large-scale wireless network infrastructure development and enhancement have been rapidly swelling in recent years. A mobile device holder can get online at a wireless network access point, which covers a limited area. When the client leaves the access point, there will be a temporary disconnection until he/she enters the coverage of another access point. Even when the coverages of two neighboring access points overlap, there is still work to do to make the wireless connection smoothly continue. The action of one wireless network access point passing a client to another access point is referred to as the handover. During handover, for security concerns, the client and the new access point should perform mutual authentication before any Internet access service is practically gained/provided. If the handover protocol is inefficient, in some cases discontinued Internet service will happen. In 2013, Li et al. proposed a fast handover authentication mechanism for wireless mesh network (WMN) based on tickets. Unfortunately, Li et al.’s work came with some weaknesses. For one thing, some sensitive information such as the time and date of expiration is sent in plaintext, which increases security risks. For another, Li et al.’s protocol includes the use of high-quality tamper-proof devices (TPDs), and this unreasonably high equipment requirement limits its applicability. In this paper, we shall propose a new efficient handover authentication mechanism. The new mechanism offers a higher level of security on a more scalable ground with the client’s privacy better preserved. The results of our performance analysis suggest that our new mechanism is superior to some similar mechanisms in terms of authentication delay. PMID:27171160

  14. Sub 10 ns fast switching and resistance control in lateral GeTe-based phase-change memory

    NASA Astrophysics Data System (ADS)

    Yin, You; Zhang, Yulong; Takehana, Yousuke; Kobayashi, Ryota; Zhang, Hui; Hosaka, Sumio

    2016-06-01

    In this study, we investigated the fast switching and resistance control in a lateral GeTe-based phase-change memory (PCM). The resistivity of GeTe as a function of annealing temperature showed that it changed by more than 6 orders of magnitude in a very narrow temperature range. X-ray diffraction patterns of GeTe films indicated that GeTe had only one crystal structure, that is, face-centered cubic. It was demonstrated that the lateral device with a top conducting layer had a good performance. The operation characteristics of the GeTe-based lateral PCM device showed that it could be operated even when sub-10-ns voltage pulses were applied, making it much faster than a Ge2Sb2Te5-based device. The device resistance was successfully controlled by applying a staircase-like pulse, which enables the device to be used for fast multilevel storage.

  15. A fast key generation method based on dynamic biometrics to secure wireless body sensor networks for p-health.

    PubMed

    Zhang, G H; Poon, Carmen C Y; Zhang, Y T

    2010-01-01

    Body sensor networks (BSNs) have emerged as a new technology for healthcare applications, but the security of communication in BSNs remains a formidable challenge yet to be resolved. The paper discusses the typical attacks faced by BSNs and proposes a fast biometric based approach to generate keys for ensuing confidentiality and authentication in BSN communications. The approach was tested on 900 segments of electrocardiogram. Each segment was 4 seconds long and used to generate a 128-bit key. The results of the study found that entropy of 96% of the keys were above 0.95 and 99% of the hamming distances calculated from any two keys were above 50 bits. Based on the randomness and distinctiveness of these keys, it is concluded that the fast biometric based approach has great potential to be used to secure communication in BSNs for health applications. PMID:21096428

  16. Feature Surfaces in Symmetric Tensor Fields Based on Eigenvalue Manifold.

    PubMed

    Palacios, Jonathan; Yeh, Harry; Wang, Wenping; Zhang, Yue; Laramee, Robert S; Sharma, Ritesh; Schultz, Thomas; Zhang, Eugene

    2016-03-01

    Three-dimensional symmetric tensor fields have a wide range of applications in solid and fluid mechanics. Recent advances in the (topological) analysis of 3D symmetric tensor fields focus on degenerate tensors which form curves. In this paper, we introduce a number of feature surfaces, such as neutral surfaces and traceless surfaces, into tensor field analysis, based on the notion of eigenvalue manifold. Neutral surfaces are the boundary between linear tensors and planar tensors, and the traceless surfaces are the boundary between tensors of positive traces and those of negative traces. Degenerate curves, neutral surfaces, and traceless surfaces together form a partition of the eigenvalue manifold, which provides a more complete tensor field analysis than degenerate curves alone. We also extract and visualize the isosurfaces of tensor modes, tensor isotropy, and tensor magnitude, which we have found useful for domain applications in fluid and solid mechanics. Extracting neutral and traceless surfaces using the Marching Tetrahedra method can cause the loss of geometric and topological details, which can lead to false physical interpretation. To robustly extract neutral surfaces and traceless surfaces, we develop a polynomial description of them which enables us to borrow techniques from algebraic surface extraction, a topic well-researched by the computer-aided design (CAD) community as well as the algebraic geometry community. In addition, we adapt the surface extraction technique, called A-patches, to improve the speed of finding degenerate curves. Finally, we apply our analysis to data from solid and fluid mechanics as well as scalar field analysis. PMID:26441450

  17. Comprehensive physics-based compact model for fast p-i-n diode using MATLAB and Simulink

    NASA Astrophysics Data System (ADS)

    Xue, Peng; Fu, Guicui; Zhang, Dong

    2016-07-01

    In this study, a physics-based model for the fast p-i-n diode is proposed. The model is based on the 1-D Fourier-based solution of ambipolar diffusion equation (ADE) implemented in MATLAB and Simulink. The physical characteristics of fast diode design concepts such as local lifetime control (LLC), emitter control (EMCON) and deep field stop are taken into account. Based on these fast diode design concepts, the ADE is solved for all injection levels instead of high-level injection only as usually done. The variation of high-level lifetime due to local lifetime control is also included in the solution. With the deep field stop layer taken into consideration, the depletion behavior in the N-base during reverse recovery is redescribed. Some physical effects such as avalanche generation and carrier recombination in the depletion region are also taken into account. To be self contained, a parameter extraction method is proposed to extract all the parameters of the model. In the end, the static and reverse recovery experiments for a commercial EMCON diode and a LLC diode are used to validate the proposed model. The simulation results are compared with experiment results and good agreement is obtained.

  18. The differential algebra based multiple level fast multipole algorithm for 3D space charge field calculation and photoemission simulation

    SciTech Connect

    None, None

    2015-09-28

    Coulomb interaction between charged particles inside a bunch is one of the most importance collective effects in beam dynamics, becoming even more significant as the energy of the particle beam is lowered to accommodate analytical and low-Z material imaging purposes such as in the time resolved Ultrafast Electron Microscope (UEM) development currently underway at Michigan State University. In addition, space charge effects are the key limiting factor in the development of ultrafast atomic resolution electron imaging and diffraction technologies and are also correlated with an irreversible growth in rms beam emittance due to fluctuating components of the nonlinear electron dynamics. In the short pulse regime used in the UEM, space charge effects also lead to virtual cathode formation in which the negative charge of the electrons emitted at earlier times, combined with the attractive surface field, hinders further emission of particles and causes a degradation of the pulse properties. Space charge and virtual cathode effects and their remediation are core issues for the development of the next generation of high-brightness UEMs. Since the analytical models are only applicable for special cases, numerical simulations, in addition to experiments, are usually necessary to accurately understand the space charge effect. In this paper we will introduce a grid-free differential algebra based multiple level fast multipole algorithm, which calculates the 3D space charge field for n charged particles in arbitrary distribution with an efficiency of O(n), and the implementation of the algorithm to a simulation code for space charge dominated photoemission processes.

  19. The differential algebra based multiple level fast multipole algorithm for 3D space charge field calculation and photoemission simulation

    DOE PAGESBeta

    None, None

    2015-09-28

    Coulomb interaction between charged particles inside a bunch is one of the most importance collective effects in beam dynamics, becoming even more significant as the energy of the particle beam is lowered to accommodate analytical and low-Z material imaging purposes such as in the time resolved Ultrafast Electron Microscope (UEM) development currently underway at Michigan State University. In addition, space charge effects are the key limiting factor in the development of ultrafast atomic resolution electron imaging and diffraction technologies and are also correlated with an irreversible growth in rms beam emittance due to fluctuating components of the nonlinear electron dynamics.more » In the short pulse regime used in the UEM, space charge effects also lead to virtual cathode formation in which the negative charge of the electrons emitted at earlier times, combined with the attractive surface field, hinders further emission of particles and causes a degradation of the pulse properties. Space charge and virtual cathode effects and their remediation are core issues for the development of the next generation of high-brightness UEMs. Since the analytical models are only applicable for special cases, numerical simulations, in addition to experiments, are usually necessary to accurately understand the space charge effect. In this paper we will introduce a grid-free differential algebra based multiple level fast multipole algorithm, which calculates the 3D space charge field for n charged particles in arbitrary distribution with an efficiency of O(n), and the implementation of the algorithm to a simulation code for space charge dominated photoemission processes.« less

  20. Fast Ignitor coupling physics

    SciTech Connect

    Mason, R.J.; Tabak, M.

    1997-10-01

    The Fast Ignitor is an alternate approach to ICF in which short pulse lasers are used to initiate burn at the surface of the compressed DT fuel. The aim is to avoid the need for careful central focusing of final shocks, and possibly to lower substantially the energy requirements for ignition. Ultimately, both goals may prove crucial to Science Based Stockpile Stewardship (SBSS). This will be the case should either emerging energetic needs, or finding difficulties render the presently planned radiative fusion approach to ignition with the NIF impractical. Ignition is a first step towards the achievement of substantial energy and neutron outputs for such Stewardship.

  1. Modular surface functionalization of polyisobutylene-based biomaterials

    NASA Astrophysics Data System (ADS)

    Alvarez Albarran, Alejandra

    Polyisobutylene (PIB) has a unique combination of properties including chemical/oxidative resistance, low Tg (˜70 °C) and hydrophobicity. 1 PIB-based materials have also been found to have excellent biocompatibility and biostability: a PIB-based triblock copolymer thermoplastic elastomer (TPE) [poly(styrene-b-isobutylene-b-styrene)] (SIBS) is FDA-approved as a drug eluting coating for coronary stents.2 A new generation of PIB-based TPEs, with an arborescent or tree-like core (arbPIB) and plastic phases composed of blocks of polystyrene or poly(p-methyl styrene) (MS) has been developed in Professor Puskas group. These materials display unique TPE properties to make them very attractive for biomedical applications.3 The biocompatibility of these novel block copolymers has already been demonstrated in vitro and in vivo in rabbits.4. The Puskas group proposed to modify the surface properties of PIB-based TPEs using a modular approach. Using this approach it is possible to modify the surface chemistry and topology independently. The surface chemistry can be modified by "gluing" low molecular weight functionalized PIBs (PIB-X) to the surface of the TPEs. This "modular" approach will give unprecedented control over surface chemistry and topology and will contribute to new fundamental understanding of the effects of surface properties on the biocompatibility of polymeric materials. In this work PIB with a primary hydroxy head group (HO-PIB) was made in situ by living carbocationic polymerization using propylene oxide as initiator and titanium tetrachloride (TiCl4 ) as coinitiator. PIB functionalized with non-fouling moieties (PIB-X) was then synthesized from HO-PIB using Candida antarctica Lipase B (CALB) as enzymatic catalyst and spin coated onto the surface of the TPE. Protein adsorption studies using Surface Plasmon Resonance (SPR) demonstrated decreased fibrinogen (Fg) adsorption to the modified surface. XPS analyses provided clear evidence of the effectiveness of

  2. Image-based surface matching algorithm oriented to structural biology.

    PubMed

    Merelli, Ivan; Cozzi, Paolo; D'Agostino, Daniele; Clematis, Andrea; Milanesi, Luciano

    2011-01-01

    Emerging technologies for structure matching based on surface descriptions have demonstrated their effectiveness in many research fields. In particular, they can be successfully applied to in silico studies of structural biology. Protein activities, in fact, are related to the external characteristics of these macromolecules and the ability to match surfaces can be important to infer information about their possible functions and interactions. In this work, we present a surface-matching algorithm, based on encoding the outer morphology of proteins in images of local description, which allows us to establish point-to-point correlations among macromolecular surfaces using image-processing functions. Discarding methods relying on biological analysis of atomic structures and expensive computational approaches based on energetic studies, this algorithm can successfully be used for macromolecular recognition by employing local surface features. Results demonstrate that the proposed algorithm can be employed both to identify surface similarities in context of macromolecular functional analysis and to screen possible protein interactions to predict pairing capability. PMID:21566253

  3. Metal Optics Based nanoLEDs: In Search of a Fast, Efficient, Nanoscale Light Emitter

    NASA Astrophysics Data System (ADS)

    Eggleston, Michael Scott

    Since the invention of the laser, stimulated emission has been the de facto king of optical communication. Lasers can be directly modulated at rates as high as 50GHz, much faster than a typical solid state light-emitting diode (LED) that is limited by spontaneous emission to <1GHz. Unfortunately, lasers have a severe scaling problem; they require large cavities operated at high power to achieve efficient lasing. A properly designed LED can be made arbitrarily small and still operate with high-efficiency. On-chip interconnects is an area that is in desperate need of a high-speed, low-power optical emitter that can enable on-chip links to replace current high-loss metal wires. In this work, I will show that by utilizing proper antenna design, a nanoLED can be created that is faster than a laser while still operating at >50% efficiency. I start by formulating an optical antenna circuit model whose elements are based completely off of antenna geometry. This allows for intuitive antenna design and suggests that rate enhancements up to ~3,000x are possible while keeping antenna efficiency >50%. Such a massive speed-up in spontaneous emission would enable an LED that can be directly modulated at 100's of GHz, much faster than any laser. I then use the circuit model to design an arch-dipole antenna, a dipole antenna with an inductive arch across the feedgap. I experimentally demonstrate a free-standing arch-dipole based nanoLED with rate enhancement of 115x and 66% antenna efficiency. Because the emitter is InGaAsP, a common III-V material, I experimentally show that this device can be easily and efficiently coupled into an InP waveguide. Experimental coupling efficiencies up to 70% are demonstrated and directional antennas are employed that offer front to back emission ratios of 3:1. Finally, I show that a nanoLED can still have high quantum yield by using a transition metal dichalcogenide, WSe2, as the emitter material. By coupling a monolayer of WSe2 to a cavity

  4. Fast GPU-based Monte Carlo simulations for LDR prostate brachytherapy

    NASA Astrophysics Data System (ADS)

    Bonenfant, Éric; Magnoux, Vincent; Hissoiny, Sami; Ozell, Benoît; Beaulieu, Luc; Després, Philippe

    2015-07-01

    The aim of this study was to evaluate the potential of bGPUMCD, a Monte Carlo algorithm executed on Graphics Processing Units (GPUs), for fast dose calculations in permanent prostate implant dosimetry. It also aimed to validate a low dose rate brachytherapy source in terms of TG-43 metrics and to use this source to compute dose distributions for permanent prostate implant in very short times. The physics of bGPUMCD was reviewed and extended to include Rayleigh scattering and fluorescence from photoelectric interactions for all materials involved. The radial and anisotropy functions were obtained for the Nucletron SelectSeed in TG-43 conditions. These functions were compared to those found in the MD Anderson Imaging and Radiation Oncology Core brachytherapy source registry which are considered the TG-43 reference values. After appropriate calibration of the source, permanent prostate implant dose distributions were calculated for four patients and compared to an already validated Geant4 algorithm. The radial function calculated from bGPUMCD showed excellent agreement (differences within 1.3%) with TG-43 accepted values. The anisotropy functions at r = 1 cm and r = 4 cm were within 2% of TG-43 values for angles over 17.5°. For permanent prostate implants, Monte Carlo-based dose distributions with a statistical uncertainty of 1% or less for the target volume were obtained in 30 s or less for 1 × 1 × 1 mm3 calculation grids. Dosimetric indices were very similar (within 2.7%) to those obtained with a validated, independent Monte Carlo code (Geant4) performing the calculations for the same cases in a much longer time (tens of minutes to more than a hour). bGPUMCD is a promising code that lets envision the use of Monte Carlo techniques in a clinical environment, with sub-minute execution times on a standard workstation. Future work will explore the use of this code with an inverse planning method to provide a complete Monte Carlo-based planning solution.

  5. Fast GPU-based Monte Carlo simulations for LDR prostate brachytherapy.

    PubMed

    Bonenfant, Éric; Magnoux, Vincent; Hissoiny, Sami; Ozell, Benoît; Beaulieu, Luc; Després, Philippe

    2015-07-01

    The aim of this study was to evaluate the potential of bGPUMCD, a Monte Carlo algorithm executed on Graphics Processing Units (GPUs), for fast dose calculations in permanent prostate implant dosimetry. It also aimed to validate a low dose rate brachytherapy source in terms of TG-43 metrics and to use this source to compute dose distributions for permanent prostate implant in very short times. The physics of bGPUMCD was reviewed and extended to include Rayleigh scattering and fluorescence from photoelectric interactions for all materials involved. The radial and anisotropy functions were obtained for the Nucletron SelectSeed in TG-43 conditions. These functions were compared to those found in the MD Anderson Imaging and Radiation Oncology Core brachytherapy source registry which are considered the TG-43 reference values. After appropriate calibration of the source, permanent prostate implant dose distributions were calculated for four patients and compared to an already validated Geant4 algorithm. The radial function calculated from bGPUMCD showed excellent agreement (differences within 1.3%) with TG-43 accepted values. The anisotropy functions at r = 1 cm and r = 4 cm were within 2% of TG-43 values for angles over 17.5°. For permanent prostate implants, Monte Carlo-based dose distributions with a statistical uncertainty of 1% or less for the target volume were obtained in 30 s or less for 1 × 1 × 1 mm(3) calculation grids. Dosimetric indices were very similar (within 2.7%) to those obtained with a validated, independent Monte Carlo code (Geant4) performing the calculations for the same cases in a much longer time (tens of minutes to more than a hour). bGPUMCD is a promising code that lets envision the use of Monte Carlo techniques in a clinical environment, with sub-minute execution times on a standard workstation. Future work will explore the use of this code with an inverse planning method to provide a complete Monte Carlo-based planning solution. PMID

  6. Fast restoration approach for motion blurred image based on deconvolution under the blurring paths

    NASA Astrophysics Data System (ADS)

    Shi, Yu; Song, Jie; Hua, Xia

    2015-12-01

    For the real-time motion deblurring, it is of utmost importance to get a higher processing speed with about the same image quality. This paper presents a fast Richardson-Lucy motion deblurring approach to remove motion blur which rotates blurred image under blurring paths. Hence, the computational time is reduced sharply by using one-dimensional Fast Fourier Transform in one-dimensional Richardson-Lucy method. In order to obtain accurate transformational results, interpolation method is incorporated to fetch the gray values. Experiment results demonstrate that the proposed approach is efficient and effective to reduce motion blur under the blur paths.

  7. A fast InSAR raw signal simulation based on GPGPU

    NASA Astrophysics Data System (ADS)

    He, Zhihua; Yu, Anxi; He, Feng; Liang, Diannong

    2011-10-01

    Under the precision constraint of interferometric SAR simulation applications, a range frequency fast algorithm is proposed to increase the InSAR raw signal simulation efficiency and the GPGPU technique is used to implement the raw signal simulation of large 10km×10km nature scene. The experiment results validate the proposed fast algorithm and the GPGPU technique. The total speedup of GPU over CPU is 4, and some local grogram speedup is over 14, which makes the InSAR raw signal simulation more practical in the InSAR system simulation.

  8. Fast neural network surrogates for very high dimensional physics-based models in computational oceanography.

    PubMed

    van der Merwe, Rudolph; Leen, Todd K; Lu, Zhengdong; Frolov, Sergey; Baptista, Antonio M

    2007-05-01

    We present neural network surrogates that provide extremely fast and accurate emulation of a large-scale circulation model for the coupled Columbia River, its estuary and near ocean regions. The circulation model has O(10(7)) degrees of freedom, is highly nonlinear and is driven by ocean, atmospheric and river influences at its boundaries. The surrogates provide accurate emulation of the full circulation code and run over 1000 times faster. Such fast dynamic surrogates will enable significant advances in ensemble forecasts in oceanography and weather. PMID:17517493

  9. A photodiode-based neutral particle bolometer for characterizing charge-exchanged fast-ion behavior.

    PubMed

    Clary, R; Smirnov, A; Dettrick, S; Knapp, K; Korepanov, S; Ruskov, E; Heidbrink, W W; Zhu, Y

    2012-10-01

    A neutral particle bolometer (NPB) has been designed and implemented on Tri Alpha Energy's C-2 device in order to spatially and temporally resolve the charge-exchange losses of fast-ion populations originating from neutral beam injection into field-reversed configuration plasmas. This instrument employs a silicon photodiode as the detection device with an integrated tungsten filter coating to reduce sensitivity to light radiation. Here we discuss the technical aspects and calibration of the NPB, and report typical NPB measurement results of wall recycling effects on fast-ion losses. PMID:23126887

  10. Local functional descriptors for surface comparison based binding prediction

    PubMed Central

    2012-01-01

    Background Molecular recognition in proteins occurs due to appropriate arrangements of physical, chemical, and geometric properties of an atomic surface. Similar surface regions should create similar binding interfaces. Effective methods for comparing surface regions can be used in identifying similar regions, and to predict interactions without regard to the underlying structural scaffold that creates the surface. Results We present a new descriptor for protein functional surfaces and algorithms for using these descriptors to compare protein surface regions to identify ligand binding interfaces. Our approach uses descriptors of local regions of the surface, and assembles collections of matches to compare larger regions. Our approach uses a variety of physical, chemical, and geometric properties, adaptively weighting these properties as appropriate for different regions of the interface. Our approach builds a classifier based on a training corpus of examples of binding sites of the target ligand. The constructed classifiers can be applied to a query protein providing a probability for each position on the protein that the position is part of a binding interface. We demonstrate the effectiveness of the approach on a number of benchmarks, demonstrating performance that is comparable to the state-of-the-art, with an approach with more generality than these prior methods. Conclusions Local functional descriptors offer a new method for protein surface comparison that is sufficiently flexible to serve in a variety of applications. PMID:23176080

  11. Nanoparticle-Based Surface Modifications for Microtribology Control and Superhydrophobicity

    NASA Astrophysics Data System (ADS)

    Hurst, Kendall Matthew

    2010-11-01

    The emergence of miniaturization techniques for consumer electronics has brought forth the relatively new and exciting field of microelectromechanical systems (MEMS). However, due to the inherent forces that exist between surfaces at the micro- and nanoscale, scientists and semiconductor manufacturers are still struggling to improve the lifetime and reliability of complex microdevices. Due to the extremely large surface area-to-volume ratio of typical MEMS and microstructured surfaces, dominant interfacial forces exist which can be detrimental to their operational lifetime. In particular, van der Waals, capillary, and electrostatic forces contribute to the permanent adhesion, or stiction , of microfabricated surfaces. This strong adhesion force also contributes to the friction and wear of these silicon-based systems. The scope of this work was to examine the effect of utilizing nanoparticles as the basis for roughening surfaces for the purpose of creating films with anti-adhesive and/or superhydrophobic properties. All of the studies presented in this work are focused around a gas-expanded liquid (GXL) process that promotes the deposition of colloidal gold nanoparticles (AuNPs) into conformal thin films. The GXL particle deposition process is finalized by a critical point drying step which is advantageous to the microelectromechanical systems and semiconductor (IC) industries. In fact, preliminary results illustrated that the GXL particle deposition process can easily be integrated into current MEMS microfabrication processes. Thin films of AuNPs deposited onto the surfaces of silicon-based MEMS and tribology test devices were shown to have a dramatic effect on the adhesion of microstructures. In the various investigations, the apparent work of adhesion between surfaces was reduced by 2-4 orders of magnitude. This effect is greatly attributed to the roughening of the typically smooth silicon oxide surfaces which, in turn, dramatically decreases the "real are of

  12. A novel Fast Gas Chromatography based technique for higher time resolution measurements of speciated monoterpenes in air

    NASA Astrophysics Data System (ADS)

    Jones, C. E.; Kato, S.; Nakashima, Y.; Kajii, Y.

    2013-12-01

    Biogenic emissions supply the largest fraction of non-methane volatile organic compounds (VOC) from the biosphere to the atmospheric boundary layer, and typically comprise a complex mixture of reactive terpenes. Due to this chemical complexity, achieving comprehensive measurements of biogenic VOC (BVOC) in air within a satisfactory time resolution is analytically challenging. To address this, we have developed a novel, fully automated Fast Gas Chromatography (Fast-GC) based technique to provide higher time resolution monitoring of monoterpenes (and selected other C9-C15 terpenes) during plant emission studies and in ambient air. To our knowledge, this is the first study to apply a Fast-GC based separation technique to achieve quantification of terpenes in air. Three chromatography methods have been developed for atmospheric terpene analysis under different sampling scenarios. Each method facilitates chromatographic separation of selected BVOC within a significantly reduced analysis time compared to conventional GC methods, whilst maintaining the ability to quantify individual monoterpene structural isomers. Using this approach, the C10-C15 BVOC composition of single plant emissions may be characterised within a ~ 14 min analysis time. Moreover, in situ quantification of 12 monoterpenes in unpolluted ambient air may be achieved within an ~ 11 min chromatographic separation time (increasing to ~ 19 min when simultaneous quantification of multiple oxygenated C9-C10 terpenoids is required, and/or when concentrations of anthropogenic VOC are significant). This corresponds to a two- to fivefold increase in measurement frequency compared to conventional GC methods. Here we outline the technical details and analytical capability of this chromatographic approach, and present the first in situ Fast-GC observations of 6 monoterpenes and the oxygenated BVOC linalool in ambient air. During this field deployment within a suburban forest ~ 30 km west of central Tokyo, Japan, the

  13. Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits.

    PubMed

    Bakshi, Andrew; Zhu, Zhihong; Vinkhuyzen, Anna A E; Hill, W David; McRae, Allan F; Visscher, Peter M; Yang, Jian

    2016-01-01

    We propose a method (fastBAT) that performs a fast set-based association analysis for human complex traits using summary-level data from genome-wide association studies (GWAS) and linkage disequilibrium (LD) data from a reference sample with individual-level genotypes. We demonstrate using simulations and analyses of real datasets that fastBAT is more accurate and orders of magnitude faster than the prevailing methods. Using fastBAT, we analyze summary data from the latest meta-analyses of GWAS on 150,064-339,224 individuals for height, body mass index (BMI), and schizophrenia. We identify 6 novel gene loci for height, 2 for BMI, and 3 for schizophrenia at PfastBAT < 5 × 10(-8). The gain of power is due to multiple small independent association signals at these loci (e.g. the THRB and FOXP1 loci for schizophrenia). The method is general and can be applied to GWAS data for all complex traits and diseases in humans and to such data in other species. PMID:27604177

  14. Fast set-based association analysis using summary data from GWAS identifies novel gene loci for human complex traits

    PubMed Central

    Bakshi, Andrew; Zhu, Zhihong; Vinkhuyzen, Anna A. E.; Hill, W. David; McRae, Allan F.; Visscher, Peter M.; Yang, Jian

    2016-01-01

    We propose a method (fastBAT) that performs a fast set-based association analysis for human complex traits using summary-level data from genome-wide association studies (GWAS) and linkage disequilibrium (LD) data from a reference sample with individual-level genotypes. We demonstrate using simulations and analyses of real datasets that fastBAT is more accurate and orders of magnitude faster than the prevailing methods. Using fastBAT, we analyze summary data from the latest meta-analyses of GWAS on 150,064–339,224 individuals for height, body mass index (BMI), and schizophrenia. We identify 6 novel gene loci for height, 2 for BMI, and 3 for schizophrenia at PfastBAT < 5 × 10−8. The gain of power is due to multiple small independent association signals at these loci (e.g. the THRB and FOXP1 loci for schizophrenia). The method is general and can be applied to GWAS data for all complex traits and diseases in humans and to such data in other species. PMID:27604177

  15. REVIEW ARTICLE: Slow and fast light based on coherent population oscillations in erbium-doped fibres

    NASA Astrophysics Data System (ADS)

    Arrieta-Yáñez, Francisco; Calderón, Oscar G.; Melle, Sonia

    2010-10-01

    In this paper we review the main results on slow and fast light induced by coherent population oscillations in optical fibres doped with erbium ions. We explain the physics behind this technique and we describe the experimental realization. Finally, we summarize some recent advances in this field and future goals.

  16. Design and Analysis of Fast Text Compression Based on Quasi-Arithmetic Coding.

    ERIC Educational Resources Information Center

    Howard, Paul G; Vitter, Jeffrey Scott

    1994-01-01

    Describes a detailed algorithm for fast text compression. Related to the PPM (prediction by partial matching) method, it simplifies the modeling phase by eliminating the escape mechanism and speeds up coding by using a combination of quasi-arithmetic coding and Rice coding. Details of the use of quasi-arithmetic code tables are given, and their…

  17. Flux Based Surface Boundary Conditions for Navier-Stokes Simulations

    NASA Astrophysics Data System (ADS)

    Fertig, M.; Auweter-Kurtz, M.

    2005-02-01

    During re-entry high thermal combined with mechanical loads arise at the TPS surface of a re-entry vehicle. Due to low gas density, high Knudsen Numbers arise, which indicate rarefaction effects such as thermo-chemical non-equilibrium as well as temperature and velocity slip. With increasing altitude, local Knudsen Numbers predict the failure of continuum equations starting in the bow shock and at the surface. While local failure of the equations in the shock can be neglected for the determination of surface loads, local failure at the surface is not negligible. The validity of continuum models can be extended by emploing surface boundary equations accounting for temperature and velocity slip. A new flux based model has been developed originating on the Boltzmann Equation. Making use of the Enskog Method perturbed partition functions for a multi-component gas are determined from the Boltzmann Equation. By introduction of the moments of Boltzmann's Equation, Maxwell's Transport Equation can be obtained. Particles approaching the surface are distinguished from particles leaving the surface depending on their molecular velocities. Hence, mass, momentum and energy fluxes to the surface can be determined employing the collisional invariants. Reactive as well as scattering models can be easily introduced in order to compute the fluxes from the surface. Finally, flux differences are balanced with the continuum fluxes from the Navier-Stokes equations. Hence, the model is able to predict temperature and velocity slip at the surface of a re-entry vehicle under rarefied conditions. Moreover, it is valid in the continuum regime as well. The boundary equations are solved fully implicit and fully coupled with the non-equilibrium Navier-Stokes Code URANUS. Results are compared to DSMC simulations for the re-entry of the US Space Shuttle orbiter at high altitudes. Key words: Navier-Stokes; re-entry; slip; non-equilibrium.

  18. Division of Icy Bodies into Groups Based on Surface Properties

    NASA Astrophysics Data System (ADS)

    Schaefer, Bradley E.; Rabinowitz, D. L.; Tourtellottte, S. W.

    2008-09-01

    We propose the division of the icy bodies in the outer Solar System into five groups based on their surface properties. This division can be equivalently made by three definitions involving: size/orbit/color; measured surface properties; the physical mechanisms that reprocess the surfaces. Our first group is the Small/Red bodies (including the red Centaurs, Kuiper Belt Objects, and Scattered Disk Objects) which are 1.5 mag. These surfaces all have albedo <16; percent, and have lost their volatile ices by Jeans escape with cosmic rays reddening the remaining ices. Our second group is the Small/Gray bodies (including the gray Centaurs, Scattered Disk Objects, and Trojans) which are <800; km in diameter and with B-R<1.5 mag. These surfaces all have very low albedo (<6; percent) because their surface ices have been lost due to heating by the Sun at some time in their past orbital history leaving only their original rocky material to cover the surface. Our third group is the Intermediate bodies (Quaoar, Orcus, and Charon) with diameters 800-1400 km. Their surfaces have lost some of the volatile ices (methane and nitrogen in particular) to Jeans escape, while the remaining ices contain ammonia and crystalline water ice with some cryovolcanism. Our fourth group is the Large bodies (Pluto, Eris, Sedna, Triton, and 2005 FY9) with diameters >1400; km. These bodies are large enough to support active cryovolcanism plus seasonal frost formation/sublimation and are large enough so that the methane and nitrogen ices dominate because they have not been lost to Jeans escape. Our fifth group is the Collisional bodies (including the 2003 EL61 collisional family) which all have similar orbits. Their surfaces all have very neutral colors, low opposition surges, and relatively high albedos, because the volatile ices were all lost during the collision leaving a young surface with only water ice.

  19. Surface segregations in platinum-based alloy nanoparticles

    NASA Astrophysics Data System (ADS)

    Yamakawa, Shunsuke; Asahi, Ryoji; Koyama, Toshiyuki

    2014-04-01

    A phase-field model that describes the radial distributions of the ordered-disordered phase and surface segregation in a single-alloy nanoparticle is introduced to clarify the overall behavior of surface segregation of various Pt-based alloy nanoparticles. One of the obstacles to apply a platinum-transition metal alloy as a cathode electro-catalyst of a polymer electrolyte fuel cell is the need to ensure the retention of the designed surface composition in an alloy nanoparticle against the alloy combinations, a particle size, and heat treatment. From the results of calculations for CrPt, FePt, CoPt, NiPt, CuPt, PdPt, IrPt, and AuPt binary nanoparticles with diameters below 10 nm at 973.15 K, the compositional variation within a single particle was found to depend on the balance between the atomic interaction within particles and the surface free energy. In addition, the obtained specific steady-state composition of the surface varied significantly with alloy combination and particle diameter. Based on the general tendencies of a binary system to exhibit segregation, attempts to control the amount of platinum segregation on the surface using a ternary-alloy system were examined.

  20. A combined voxel and surface based method for topology correction of brain surfaces

    NASA Astrophysics Data System (ADS)

    Gris, Florence; Favreau, Jean-Marie; Acosta, Oscar; Barra, Vincent; Salvado, Olivier

    2010-03-01

    Brain surfaces provide a reliable representation for cortical mapping. The construction of correct surfaces from magnetic resonance images (MRI) segmentation is a challenging task, especially when genus zero surfaces are required for further processing such as parameterization, partial inflation and registration. The generation of such surfaces has been approached either by correcting a binary image as part of the segmentation pipeline or by modifying the mesh representing the surface. During this task, the preservation of the structure may be compromised because of the convoluted nature of the brain and noisy/imperfect segmentations. In this paper, we propose a combined, voxel and surfacebased, topology correction method which preserves the structure of the brain while yielding genus zero surfaces. The topology of the binary segmentation is first corrected using a set of topology preserving operators applied sequentially. This results in a white matter/gray matter binary set with correct sulci delineation, homotopic to a filled sphere. Using the corrected segmentation, a marching cubes mesh is then generated and the tunnels and handles resulting from the meshing are finally removed with an algorithm based on the detection of nonseparating loops. The approach was validated using 20 young individuals MRI from the OASIS database, acquired at two different time-points. Reproducibility and robustness were evaluated using global and local criteria such as surface area, curvature and point to point distance. Results demonstrated the method capability to produce genus zero meshes while preserving geometry, two fundamental properties for reliable and accurate cortical mapping and further clinical studies.

  1. Response Mechanism for Surface Acoustic Wave Gas Sensors Based on Surface-Adsorption

    PubMed Central

    Liu, Jiansheng; Lu, Yanyan

    2014-01-01

    A theoretical model is established to describe the response mechanism of surface acoustic wave (SAW) gas sensors based on physical adsorption on the detector surface. Wohljent's method is utilized to describe the relationship of sensor output (frequency shift of SAW oscillator) and the mass loaded on the detector surface. The Brunauer-Emmett-Teller (BET) formula and its improved form are introduced to depict the adsorption behavior of gas on the detector surface. By combining the two methods, we obtain a theoretical model for the response mechanism of SAW gas sensors. By using a commercial SAW gas chromatography (GC) analyzer, an experiment is performed to measure the frequency shifts caused by different concentration of dimethyl methylphosphonate (DMMP). The parameters in the model are given by fitting the experimental results and the theoretical curve agrees well with the experimental data. PMID:24743157

  2. Universal Quantum Transducers Based on Surface Acoustic Waves

    NASA Astrophysics Data System (ADS)

    Schuetz, M. J. A.; Kessler, E. M.; Giedke, G.; Vandersypen, L. M. K.; Lukin, M. D.; Cirac, J. I.

    2015-07-01

    We propose a universal, on-chip quantum transducer based on surface acoustic waves in piezoactive materials. Because of the intrinsic piezoelectric (and/or magnetostrictive) properties of the material, our approach provides a universal platform capable of coherently linking a broad array of qubits, including quantum dots, trapped ions, nitrogen-vacancy centers, or superconducting qubits. The quantized modes of surface acoustic waves lie in the gigahertz range and can be strongly confined close to the surface in phononic cavities and guided in acoustic waveguides. We show that this type of surface acoustic excitation can be utilized efficiently as a quantum bus, serving as an on-chip, mechanical cavity-QED equivalent of microwave photons and enabling long-range coupling of a wide range of qubits.

  3. Controllable adhesive superhydrophobic surfaces based on PDMS microwell arrays.

    PubMed

    Yong, Jiale; Chen, Feng; Yang, Qing; Zhang, Dongshi; Bian, Hao; Du, Guangqing; Si, Jinhai; Meng, Xiangwei; Hou, Xun

    2013-03-12

    This paper presents a one-step method to fabricate superhydrophobic surfaces with extremely controllable adhesion based on PDMS microwell arrays. The microwell array structures are rapidly produced on PDMS films by a point-by-point femtosecond laser scanning process. The as-prepared superhydrophobic surfaces show water controllable adhesion that ranges from ultrahigh to ultralow by adjusting the extent of overlap of the adjacent microwells, on which the sliding angle can be controlled from 180° (a water droplet can not slide down even when the as-prepared surface is turned upside down) to 3°. A "micro-airbag effect" is introduced to explain the adhesion transition phenomenon of the microwell array structures. This work provides a facile and promising strategy to fabricate superhydrophobic surfaces with controllable adhesion. PMID:23391207

  4. The Derivation of the Gradient of the Acoustic Pressure on a Moving Surface for Application to the Fast Scattering Code (FSC)

    NASA Technical Reports Server (NTRS)

    Farassat, F.; Brentner, Kenneth S.

    2005-01-01

    In this paper we develop an analytic expression for calculation of the the acoustic pressure from a rotating blade on a moving surface for application to the Fast Scattering Code (FSC). The analytic result is intended to be used in the helicopter noise prediction code PSU-WOPWOP. One of the goals of the derivation is obtaining a result that will not use any more information than are needed for the prediction of the thickness and loading noise. The result derived here achieves this goal and its incorporation in PSU-WOPWOP is straight forward and attainable.

  5. A novel multi-aperture based sun sensor based on a fast multi-point MEANSHIFT (FMMS) algorithm.

    PubMed

    You, Zheng; Sun, Jian; Xing, Fei; Zhang, Gao-Fei

    2011-01-01

    With the current increased widespread interest in the development and applications of micro/nanosatellites, it was found that we needed to design a small high accuracy satellite attitude determination system, because the star trackers widely used in large satellites are large and heavy, and therefore not suitable for installation on micro/nanosatellites. A Sun sensor + magnetometer is proven to be a better alternative, but the conventional sun sensor has low accuracy, and cannot meet the requirements of the attitude determination systems of micro/nanosatellites, so the development of a small high accuracy sun sensor with high reliability is very significant. This paper presents a multi-aperture based sun sensor, which is composed of a micro-electro-mechanical system (MEMS) mask with 36 apertures and an active pixels sensor (APS) CMOS placed below the mask at a certain distance. A novel fast multi-point MEANSHIFT (FMMS) algorithm is proposed to improve the accuracy and reliability, the two key performance features, of an APS sun sensor. When the sunlight illuminates the sensor, a sun spot array image is formed on the APS detector. Then the sun angles can be derived by analyzing the aperture image location on the detector via the FMMS algorithm. With this system, the centroid accuracy of the sun image can reach 0.01 pixels, without increasing the weight and power consumption, even when some missing apertures and bad pixels appear on the detector due to aging of the devices and operation in a harsh space environment, while the pointing accuracy of the single-aperture sun sensor using the conventional correlation algorithm is only 0.05 pixels. PMID:22163770

  6. A Novel Multi-Aperture Based Sun Sensor Based on a Fast Multi-Point MEANSHIFT (FMMS) Algorithm

    PubMed Central

    You, Zheng; Sun, Jian; Xing, Fei; Zhang, Gao-Fei

    2011-01-01

    With the current increased widespread interest in the development and applications of micro/nanosatellites, it was found that we needed to design a small high accuracy satellite attitude determination system, because the star trackers widely used in large satellites are large and heavy, and therefore not suitable for installation on micro/nanosatellites. A Sun sensor + magnetometer is proven to be a better alternative, but the conventional sun sensor has low accuracy, and cannot meet the requirements of the attitude determination systems of micro/nanosatellites, so the development of a small high accuracy sun sensor with high reliability is very significant. This paper presents a multi-aperture based sun sensor, which is composed of a micro-electro-mechanical system (MEMS) mask with 36 apertures and an active pixels sensor (APS) CMOS placed below the mask at a certain distance. A novel fast multi-point MEANSHIFT (FMMS) algorithm is proposed to improve the accuracy and reliability, the two key performance features, of an APS sun sensor. When the sunlight illuminates the sensor, a sun spot array image is formed on the APS detector. Then the sun angles can be derived by analyzing the aperture image location on the detector via the FMMS algorithm. With this system, the centroid accuracy of the sun image can reach 0.01 pixels, without increasing the weight and power consumption, even when some missing apertures and bad pixels appear on the detector due to aging of the devices and operation in a harsh space environment, while the pointing accuracy of the single-aperture sun sensor using the conventional correlation algorithm is only 0.05 pixels. PMID:22163770

  7. Radial subsampling for fast cost function computation in intensity-based 3D image registration

    NASA Astrophysics Data System (ADS)

    Boettger, Thomas; Wolf, Ivo; Meinzer, Hans-Peter; Celi, Juan Carlos

    2007-03-01

    Image registration is always a trade-off between accuracy and speed. Looking towards clinical scenarios the time for bringing two or more images into registration should be around a few seconds only. We present a new scheme for subsampling 3D-image data to allow for efficient computation of cost functions in intensity-based image registration. Starting from an arbitrary center point voxels are sampled along scan lines which do radially extend from the center point. We analyzed the characteristics of different cost functions computed on the sub-sampled data and compared them to known cost functions with respect to local optima. Results show the cost functions are smooth and give high peaks at the expected optima. Furthermore we investigated capture range of cost functions computed under the new subsampling scheme. Capture range was remarkably better for the new scheme compared to metrics using all voxels or different subsampling schemes and high registration accuracy was achieved as well. The most important result is the improvement in terms of speed making this scheme very interesting for clinical scenarios. We conclude using the new subsampling scheme intensity-based 3D image registration can be performed much faster than using other approaches while maintaining high accuracy. A variety of different extensions of the new approach is conceivable, e.g. non-regular distribution of the scan lines or not to let the scan lines start from a center point only, but from the surface of an organ model for example.

  8. A fast reconstruction algorithm for bioluminescence tomography based on smoothed l0 norm regularization

    NASA Astrophysics Data System (ADS)

    He, Xiaowei; Yu, Jingjing; Geng, Guohua; Guo, Hongbo

    2013-10-01

    As an important optical molecular imaging technique, bioluminescence tomography (BLT) offers an inexpensive and sensitive means for non-invasively imaging a variety of physiological and pathological activities at cellular and molecular levels in living small animals. The key problem of BLT is to recover the distribution of the internal bioluminescence sources from limited measurements on the surface. Considering the sparsity of the light source distribution, we directly formulate the inverse problem of BLT into an l0-norm minimization model and present a smoothed l0-norm (SL0) based reconstruction algorithm. By approximating the discontinuous l0 norm with a suitable continuous function, the SL0 norm method solves the problem of intractable computational load of the minimal l0 search as well as high sensitivity of l0-norm to noise. Numerical experiments on a mouse atlas demonstrate that the proposed SL0 norm based reconstruction method can obtain whole domain reconstruction without any a priori knowledge of the source permissible region, yielding almost the same reconstruction results to those of l1 norm methods.

  9. Silica encapsulated lipid-based drug delivery systems for reducing the fed/fasted variations of ziprasidone in vitro.

    PubMed

    Dening, Tahnee J; Rao, Shasha; Thomas, Nicky; Prestidge, Clive A

    2016-04-01

    Ziprasidone is a poorly water-soluble antipsychotic drug that demonstrates low fasted state oral bioavailability and a clinically significant two-fold increase in absorption when dosed postprandially. Owing to significant compliance challenges faced by schizophrenic patients, a novel oral formulation of ziprasidone that demonstrates improved fasted state absorption and a reduced food effect is of major interest, and is therefore the aim of this research. Three lipid-based drug delivery systems (LBDDS) were developed and investigated: (a) a self-nanoemulsifying drug delivery system (SNEDDS), (b) a solid SNEDDS formulation, and (c) silica-lipid hybrid (SLH) microparticles. SNEDDS was developed using Capmul MCM® and Tween 80®, and solid SNEDDS was fabricated by spray-drying SNEDDS with Aerosil 380® silica nanoparticles as the solid carrier. SLH microparticles were prepared in a similar manner to solid SNEDDS using a precursor lipid emulsion composed of Capmul MCM® and soybean lecithin. The performance of the developed formulations was evaluated under simulated digesting conditions using an in vitro lipolysis model, and pure (unformulated) ziprasidone was used as a control. While pure ziprasidone exhibited the lowest rate and extent of drug solubilization under fasting conditions and a significant 2.4-fold increase in drug solubilization under fed conditions, all three LBDDS significantly enhanced the extent of drug solubilization under fasting conditions between 18- and 43-folds in comparison to pure drug. No significant difference in drug solubilization for the fed and fasted states was observed for the three LBDDS systems. To highlight the potential of LBDDS, mechanism(s) of action and various performance characteristics are discussed. Importantly, LBDDS are identified as an appropriate formulation strategy to explore further for the improved oral delivery of ziprasidone. PMID:26812284

  10. APPLICATION OF HYDROPHILIC STARCH-BASED COATINGS TO POLYETHYLENE SURFACES

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Coatings were applied to polyethylene film surfaces by spraying formulations prepared from a jet cooked dispersion of waxy cornstarch, a water-based epoxy resin, a wax emulsion, and a surfactant. Although the starch component separated rapidly from the coating when the film was placed in water at r...

  11. WE-D-9A-01: A Novel Mesh-Based Deformable Surface-Contour Registration

    SciTech Connect

    Zhong, Z; Cai, Y; Guo, X; Jia, X; Chiu, T; Kearney, V; Liu, H; Jiang, L; Chen, S; Yordy, J; Nedzi, L; Mao, W

    2014-06-15

    Purpose: Initial guess is vital for 3D-2D deformable image registration (DIR) while dealing with large deformations for adaptive radiation therapy. A fast procedure has been developed to deform body surface to match 2D body contour on projections. This surface-contour DIR will provide an initial deformation for further complete 3D DIR or image reconstruction. Methods: Both planning CT images and come-beam CT (CBCT) projections are preprocessed to create 0–1 binary mask. Then the body surface and CBCT projection body contours are extracted by Canny edge detector. A finite element modeling system was developed to automatically generate adaptive meshes based on the image surface. After that, the projections of the CT surface voxels are computed and compared with corresponding 2D projection contours from CBCT scans. As a result, the displacement vector field (DVF) on mesh vertices around the surface was optimized iteratively until the shortest Euclidean distance between the pixels on the projections of the deformed CT surface and the corresponding CBCT projection contour is minimized. With the help of the tetrahedral meshes, we can smoothly diffuse the deformation from the surface into the interior of the volume. Finally, the deformed CT images are obtained by the optimal DVF applied on the original planning CT images. Results: The accuracy of the surface-contour registration is evaluated by 3D normalized cross correlation increased from 0.9176 to 0.9957 (sphere-ellipsoid phantom) and from 0.7627 to 0.7919 (H and N cancer patient data). Under the GPU-based implementation, our surface-contour-guided method on H and N cancer patient data takes 8 seconds/iteration, about 7.5 times faster than direct 3D method (60 seconds/iteration), and it needs fewer optimization iterations (30 iterations vs 50 iterations). Conclusion: The proposed surface-contour DIR method can substantially improve both the accuracy and the speed of reconstructing volumetric images, which is helpful

  12. New, dense, and fast scintillators based on rare-earth tantalo-niobates

    NASA Astrophysics Data System (ADS)

    Voloshyna, O. V.; Boiaryntseva, I. A.; Baumer, V. N.; Ivanov, A. I.; Korjik, M. V.; Sidletskiy, O. Ts.

    2014-11-01

    Samples of undoped yttrium and gadolinium tantalo-niobates with common formulae RE(NbxTa1-x)O4, where RE=Y or Gd and x=0-1, have been obtained by solid-state reaction. Systematic study of structural, luminescent, and scintillation properties of these compounds was carried out. Lattice parameters and space groups of the mixed compounds were identified. UV- and X-ray luminescence spectra, as well as relative light outputs and scintillation decay times are measured. Gadolinium tantalo-niobate with the formulae GdNb0.2Ta0.8O4 showed the light output around 13 times larger than PbWO4 and fast decay with time constant 12 ns without additional slow component. Gadolinium tantalo-niobates may be considered as promising materials for high energy physics due to extremely high density, substantial light output, and fast decay.

  13. "A Fast Running Program For Minicomputer Based On Exact Derivative Of Optimization Criterions"

    NASA Astrophysics Data System (ADS)

    Hugues, Edgar; Babolat, Claude; Bacchus, J. M.

    1983-10-01

    The very fast evolution of the Hardware and the software brings the optical designer to choice betwen two attitudes. 1) To use the services of a specialized company which is continusly devoloping optical programs. 2) To write its own programs and improve them according to the needs. Theory and experience have to help themselves to realize an harmonious balance in order to get product improvements through programs improvements. CERCO has choosen the second alternative.

  14. PHYML Online—a web server for fast maximum likelihood-based phylogenetic inference

    PubMed Central

    Guindon, Stéphane; Lethiec, Franck; Duroux, Patrice; Gascuel, Olivier

    2005-01-01

    PHYML Online is a web interface to PHYML, a software that implements a fast and accurate heuristic for estimating maximum likelihood phylogenies from DNA and protein sequences. This tool provides the user with a number of options, e.g. nonparametric bootstrap and estimation of various evolutionary parameters, in order to perform comprehensive phylogenetic analyses on large datasets in reasonable computing time. The server and its documentation are available at . PMID:15980534

  15. Fast Marching and Runge-Kutta Based Method for Centreline Extraction of Right Coronary Artery in Human Patients.

    PubMed

    Cui, Hengfei; Wang, Desheng; Wan, Min; Zhang, Jun-Mei; Zhao, Xiaodan; Tan, Ru San; Huang, Weimin; Xiong, Wei; Duan, Yuping; Zhou, Jiayin; Luo, Tong; Kassab, Ghassan S; Zhong, Liang

    2016-06-01

    The CT angiography (CTA) is a clinically indicated test for the assessment of coronary luminal stenosis that requires centerline extractions. There is currently no centerline extraction algorithm that is automatic, real-time and very accurate. Therefore, we sought to (i) develop a hybrid approach by incorporating fast marching and Runge-Kutta based methods for the extraction of coronary artery centerlines from CTA; (ii) evaluate the accuracy of the present method compared to Van's method by using ground truth centerline as a reference; (iii) evaluate the coronary lumen area of our centerline method in comparison with the intravascular ultrasound (IVUS) as the standard of reference. The proposed method was found to be more computationally efficient, and performed better than the Van's method in terms of overlap measures (i.e., OV: [Formula: see text] vs. [Formula: see text]; OF: [Formula: see text] vs. [Formula: see text]; and OT: [Formula: see text] vs. [Formula: see text], all [Formula: see text]). In comparison with IVUS derived coronary lumen area, the proposed approach was more accurate than the Van's method. This hybrid approach by incorporating fast marching and Runge-Kutta based methods could offer fast and accurate extraction of centerline as well as the lumen area. This method may garner wider clinical potential as a real-time coronary stenosis assessment tool. PMID:27140197

  16. Theoretical impact of fast rotation on calibrating the surface brightness-color relation for early-type stars

    NASA Astrophysics Data System (ADS)

    Challouf, M.; Nardetto, N.; Domiciano de Souza, A.; Mourard, D.; Aroui, H.; Stee, P.; Delaa, O.; Graczyk, D.; Pietrzyński, G.; Gieren, W.

    2015-07-01

    Context. The eclipsing binary method for determining distance in the local group is based on the surface brightness-color relation (SBCR), and early-type stars are preferred targets because of their intrinsic brightness. However, this type of star exhibits wind, mass-loss, pulsation, and rotation, which may generate bias on the angular diameter determination. An accurate calibration of the SBCR relation thus requires careful analysis. Aims: In this paper we aim to quantify the impact of stellar rotation on the SBCR when the calibration of the relation is based on interferometric measurements of angular diameters. Methods: Six stars with V - K color indices ranging between -1 and 0.5 were modeled using the code for high angular resolution of rotating objects in nature (CHARRON) with various rotational velocities (0, 25, 50, 75, and 95% of the critical rotational velocity) and inclination (0, 25, 50, 75, and 90 degrees). All these models have their equatorial axis aligned in an east-west orientation in the sky. We then simulated interferometric observations of these theoretical stars using three representative sets of the CHARA baseline configurations. The simulated data were then interpreted as if the stars were non-rotating to determine an angular diameter and estimate the surface-brightness relation. The V - K color of the rotating star was calculated directly from the CHARRON code. This provides an estimate of the intrinsic dispersion of the SBCR relation when the rotation effects of flattening and gravity darkening are not considered in the analysis of interferometric data. Results: We find a clear relation between the rotational velocity and (1) the shift in zero point (Δa0) of the SBCR (compared to the static relation) and (2) its dispersion (σ). When considering stars rotating at less than 50% of their critical velocity, Δa0 and σ have about 0.01 mag, while these quantities can reach 0.08 and 0.04 mag, respectively, when the rotation is larger than 75% of

  17. License plate localization in complex scenes based on oriented FAST and rotated BRIEF feature

    NASA Astrophysics Data System (ADS)

    Wang, Ran; Xia, Yuanchun; Wang, Guoyou; Tian, Jiangmin

    2015-09-01

    Within intelligent transportation systems, fast and robust license plate localization (LPL) in complex scenes is still a challenging task. Real-world scenes introduce complexities such as variation in license plate size and orientation, uneven illumination, background clutter, and nonplate objects. These complexities lead to poor performance using traditional LPL features, such as color, edge, and texture. Recently, state-of-the-art performance in LPL has been achieved by applying the scale invariant feature transform (SIFT) descriptor to LPL for visual matching. However, for applications that require fast processing, such as mobile phones, SIFT does not meet the efficiency requirement due to its relatively slow computational speed. To address this problem, a new approach for LPL, which uses the oriented FAST and rotated BRIEF (ORB) feature detector, is proposed. The feature extraction in ORB is much more efficient than in SIFT and is invariant to scale and grayscale as well as rotation changes, and hence is able to provide superior performance for LPL. The potential regions of a license plate are detected by considering spatial and color information simultaneously, which is different from previous approaches. The experimental results on a challenging dataset demonstrate the effectiveness and efficiency of the proposed method.

  18. Computer-Based Video Instruction to Teach Students with Intellectual Disabilities to Verbally Respond to Questions and Make Purchases in Fast Food Restaurants

    ERIC Educational Resources Information Center

    Mechling, Linda C.; Pridgen, Leslie S.; Cronin, Beth A.

    2005-01-01

    Computer-based video instruction (CBVI) was used to teach verbal responses to questions presented by cashiers and purchasing skills in fast food restaurants. A multiple probe design across participants was used to evaluate the effectiveness of CBVI. Instruction occurred through simulations of three fast food restaurants on the computer using video…

  19. GPU-accelerated non-uniform fast Fourier transform-based compressive sensing spectral domain optical coherence tomography.

    PubMed

    Xu, Daguang; Huang, Yong; Kang, Jin U

    2014-06-16

    We implemented the graphics processing unit (GPU) accelerated compressive sensing (CS) non-uniform in k-space spectral domain optical coherence tomography (SD OCT). Kaiser-Bessel (KB) function and Gaussian function are used independently as the convolution kernel in the gridding-based non-uniform fast Fourier transform (NUFFT) algorithm with different oversampling ratios and kernel widths. Our implementation is compared with the GPU-accelerated modified non-uniform discrete Fourier transform (MNUDFT) matrix-based CS SD OCT and the GPU-accelerated fast Fourier transform (FFT)-based CS SD OCT. It was found that our implementation has comparable performance to the GPU-accelerated MNUDFT-based CS SD OCT in terms of image quality while providing more than 5 times speed enhancement. When compared to the GPU-accelerated FFT based-CS SD OCT, it shows smaller background noise and less side lobes while eliminating the need for the cumbersome k-space grid filling and the k-linear calibration procedure. Finally, we demonstrated that by using a conventional desktop computer architecture having three GPUs, real-time B-mode imaging can be obtained in excess of 30 fps for the GPU-accelerated NUFFT based CS SD OCT with frame size 2048(axial) × 1,000(lateral). PMID:24977582

  20. GPU-accelerated non-uniform fast Fourier transform-based compressive sensing spectral domain optical coherence tomography

    PubMed Central

    Xu, Daguang; Huang, Yong; Kang, Jin U.

    2014-01-01

    We implemented the graphics processing unit (GPU) accelerated compressive sensing (CS) non-uniform in k-space spectral domain optical coherence tomography (SD OCT). Kaiser-Bessel (KB) function and Gaussian function are used independently as the convolution kernel in the gridding-based non-uniform fast Fourier transform (NUFFT) algorithm with different oversampling ratios and kernel widths. Our implementation is compared with the GPU-accelerated modified non-uniform discrete Fourier transform (MNUDFT) matrix-based CS SD OCT and the GPU-accelerated fast Fourier transform (FFT)-based CS SD OCT. It was found that our implementation has comparable performance to the GPU-accelerated MNUDFT-based CS SD OCT in terms of image quality while providing more than 5 times speed enhancement. When compared to the GPU-accelerated FFT based-CS SD OCT, it shows smaller background noise and less side lobes while eliminating the need for the cumbersome k-space grid filling and the k-linear calibration procedure. Finally, we demonstrated that by using a conventional desktop computer architecture having three GPUs, real-time B-mode imaging can be obtained in excess of 30 fps for the GPU-accelerated NUFFT based CS SD OCT with frame size 2048(axial)×1000(lateral). PMID:24977582