Science.gov

Sample records for fragmentation products including

  1. Production of antibody fragments in Escherichia coli.

    PubMed

    Katsuda, Tomohisa; Sonoda, Hiroyuki; Kumada, Yoichi; Yamaji, Hideki

    2012-01-01

    Escherichia coli is a host widely used in the industrial production of recombinant proteins. However, the expression of heterologous proteins in E. coli often encounters the formation of inclusion bodies, which are insoluble and nonfunctional protein aggregates. For the successful production of antibody fragments, which includes single-chain variable fragments (scFvs), we describe here the modification of linker, signal, and Shine-Dalgarno (SD) sequences, the coexpression of cytoplasmic and periplasmic chaperones, and a method for fed-batch cultivation with exponential feed. PMID:22907360

  2. Asymmetry effects in fragment production

    NASA Astrophysics Data System (ADS)

    Kaur, Manpreet; Kaur, Varinderjit

    2016-05-01

    The production of different fragments has been studied by taking into account the mass asymmetry of the reaction and employing the momentum dependent interactions. Two different set of asymmetric reactions have been analyzed while keeping Atotal fixed using soft momentum dependent equation of state. Our results indicate that the impact of momentum dependent interactions is different in lighter projectile systems as compared to heavier ones. The comparative analysis of IQMD simulations with the experimental data in case of heavier projectile and lighter target system for the reaction of 197Au+27Al (η = 0.7) at E = 600 MeV/nucleon shows that with the inclusion of MDI we are able, upto some extent, to reproduce the experimental universality of rise and fall of intermediate mass fragments (IMFs).

  3. Comparison of calculations of fragment production

    SciTech Connect

    Canavan, G.H.

    1998-01-01

    This note compares estimates of fragment production rates in debris collisions through calculations performed with consistent debris distribution functions implicit in integrated collision frequencies provided by Attachment A. Differences between estimates of fragment production rates in space debris collisions are shown to be due primarily to different choices of the exponent in the fragment production function and the distinction between catastrophic and all collisions. Sensitivity to the fragment production parameter over the range of values consistent with experimental data is discussed.

  4. Comparison of calculations of fragment production rates

    SciTech Connect

    Canavan, G.H.

    1997-08-01

    Differences between NASA and DoD estimates of fragment production rates in space debris collisions are shown to be due primarily to different choices of the exponent in the debris distribution. The sensitivity to this parameter over the range of values consistent with experimental data is discussed.

  5. Energy production using fission fragment rockets

    NASA Astrophysics Data System (ADS)

    Chapline, G.; Matsuda, Y.

    1991-08-01

    Fission fragment rockets are nuclear reactors with a core consisting of thin fibers in a vacuum, and which use magnetic fields to extract the fission fragments from the reactor core. As an alternative to ordinary nuclear reactors, fission fragment rockets would have the following advantages: approximately twice the efficiency if the fission fragment energy can be directly converted into electricity; reduction of the buildup of a fission fragment inventory in the reactor could avoid a Chernobyl type disaster; and collection of the fission fragments outside the reactor could simplify the waste disposal problem.

  6. Double Parton Fragmentation Function and its Evolution in Quarkonium Production

    NASA Astrophysics Data System (ADS)

    Kang, Zhong-Bo

    2014-01-01

    We summarize the results of a recent study on a new perturbative QCD factorization formalism for the production of heavy quarkonia of large transverse momentum pT at collider energies. Such a new factorization formalism includes both the leading power (LP) and next-to-leading power (NLP) contributions to the cross section in the mQ2/p_T^2 expansion for heavy quark mass mQ. For the NLP contribution, the so-called double parton fragmentation functions are involved, whose evolution equations have been derived. We estimate fragmentation functions in the non-relativistic QCD formalism, and found that their contribution reproduce the bulk of the large enhancement found in explicit NLO calculations in the color singlet model. Heavy quarkonia produced from NLP channels prefer longitudinal polarization, in contrast to the single parton fragmentation function. This might shed some light on the heavy quarkonium polarization puzzle.

  7. Production of fragments and hyperfragments in antiproton-nucleus collisions

    NASA Astrophysics Data System (ADS)

    Feng, Zhao-Qing

    2016-04-01

    The formation mechanism of fragments with strangeness in collisions of antiprotons on nuclei has been investigated within the Lanzhou quantum molecular dynamics (LQMD) transport model. Production of strange particles in the antiproton-induced nuclear reactions is modeled within the LQMD model, in which all possible reaction channels such as elastic scattering, annihilation, charge exchange, and inelastic scattering in antibaryon-baryon, baryon-baryon, and meson-baryon collisions have been included. A coalescence approach is developed for constructing hyperfragments in phase space. The hyperfragments are formed within the narrower rapidities. It has the advantage of producing heavier hyperfragments and hypernuclides with strangeness s =-2 (double-Λ fragments) and s =1 (Λ ¯ fragments) in antiproton-induced reactions.

  8. {J}/{ψ} production via fragmentation at HERA

    NASA Astrophysics Data System (ADS)

    Godbole, R. M.; Roy, D. P.; Sridhar, K.

    1996-02-01

    We compute the contributions to large- p T{J}/{ψ} production at DHEA coming from fragmentation of gluons and charm quarks. We find that the charm quark fragmentation contribution dominates over the direct production of {J}/{ψ} via photongluon fusion at large- p T, while the gluon fragmentation is negligibly small over the whole range of pT. An experimental study of pT distributions of {J}/{ψ} at HERA will providea direct probe of the charm quark fragmentation functions.

  9. Production of Energetic Light Fragments in Spallation Reactions

    NASA Astrophysics Data System (ADS)

    Mashnik, Stepan G.; Kerby, Leslie M.; Gudima, Konstantin K.; Sierk, Arnold J.

    2014-03-01

    Different reaction mechanisms contribute to the production of light fragments (LF) from nuclear reactions. Available models cannot accurately predict emission of LF from arbitrary reactions. However, the emission of LF is important formany applications, such as cosmic-ray-induced single event upsets, radiation protection, and cancer therapy with proton and heavy-ion beams, to name just a few. The cascade-exciton model (CEM) and the Los Alamos version of the quark-gluon string model (LAQGSM), as implemented in the CEM03.03 and LAQGSM03.03 event generators used in the Los Alamos Monte Carlo transport code MCNP6, describe quite well the spectra of fragments with sizes up to 4He across a broad range of target masses and incident energies. However, they do not predict high-energy tails for LF heavier than 4He. The standard versions of CEM and LAQGSM do not account for preequilibrium emission of LF larger than 4He. The aim of our work is to extend the preequilibrium model to include such processes. We do this by including the emission of fragments heavier than 4He at the preequilibrium stage, and using an improved version of the Fermi Break-up model, providing improved agreement with various experimental data.

  10. Fragmentation production of charmed hadrons in electron-positron annihilation

    SciTech Connect

    Novoselov, A. A.

    2010-10-15

    Processes involving the production of D* mesons and {Lambda}{sub c} baryons in electron-positron annihilation at the energies of 10.58 and 91.18 GeV are considered. At the energy of 10.58 GeV, the production of pairs of B mesons that is followed by their decay to charmed particles is analyzed along with direct charm production. The violation of scaling in the respective fragmentation functions is taken into account in the next-to-leading-logarithmic approximation of perturbative QCD. The required nonperturbative fragmentation functions are extracted numerically from experimental data obtained at B factories and are approximated by simple analytic expressions. It is shown that the difference in the nonperturbative fragmentation functions for transitions to mesons and baryons can readily be explained on the basis of the quark-counting rules.

  11. Product State and Speed Distributions in Photochemical Triple Fragmentations

    NASA Astrophysics Data System (ADS)

    Quinn, M. S.; De Wit, G.; Heazlewood, B. R.; Nauta, K.; Kable, S. H.; Jordan, M. J. T.; Reid, S. A.; Maccarone, A. T.

    2012-06-01

    The clearest dynamical signature of a roaming reaction is a very cold distribution of energy into the rotational and translational degrees of freedom of the roaming donor fragment (e.g. CO) and an exceptionally hot vibrational distribution in the roaming acceptor fragment (e.g. H_2, CH_4). These signatures were initially identified in joint experimental/theoretical investigations of roaming in H_2CO and CH_3CHO and are now being used to infer the presence of roaming mechanisms in other photodissociating molecules. In this seminar we present a phase space theory (PST) model of triple fragmentation (3F) and show that the dynamical signature of triple fragmentation is very similar to that of the roaming donor fragment. The 3F-PST model assumes that the initial two-body fragmentation (2F) step occurs via a barrierless bond cleavage process (which is true for many many closed shell systems), and calculates the 2F-PST distribution of energy in each fragment. The 2F-PST model is benchmarked against H_2CO → H + HCO, CH_3CHO → HCO + CH_3, CH_3CHO → H + CH_3CO, and CH_3OCHO → H + CH_3OCO and shown to provide a good representation of the available experimental data. Every fragment with sufficient internal energy to undergo subsequent spontaneous dissociation is allowed to dissociate and the 3F-PST distribution of energy into secondary products is calculated. Using CH_3CHO → HCO + CH_3 → H + CO + CH_3 as an example, we calculate that the energy disposal into the product rotational and translational degrees of freedom of the secondary fragments is very low. In the case of the CO fragment this is similar to the dynamical signature for production of CO via a roaming mechanism. We compare the 3F-PST model with published experimental data for photodissociation of several molecules at energies above the 3F threshold, and demonstrate that, in some cases, 3F provides an alternative explanation for the observed product state distribution.

  12. Production of recombinant antibody fragments in Bacillus megaterium

    PubMed Central

    Jordan, Eva; Hust, Michael; Roth, Andreas; Biedendieck, Rebekka; Schirrmann, Thomas; Jahn, Dieter; Dübel, Stefan

    2007-01-01

    Background Recombinant antibodies are essential reagents for research, diagnostics and therapy. The well established production host Escherichia coli relies on the secretion into the periplasmic space for antibody synthesis. Due to the outer membrane of Gram-negative bacteria, only a fraction of this material reaches the medium. Recently, the Gram-positive bacterium Bacillus megaterium was shown to efficiently secrete recombinant proteins into the growth medium. Here we evaluated B. megaterium for the recombinant production of antibody fragments. Results The lysozyme specific single chain Fv (scFv) fragment D1.3 was succesfully produced using B. megaterium. The impact of culture medium composition, gene expression time and culture temperatures on the production of functional scFv protein was systematically analyzed. A production and secretion at 41°C for 24 h using TB medium was optimal for this individual scFv. Interestingly, these parameters were very different to the optimal conditions for the expression of other proteins in B. megaterium. Per L culture supernatant, more than 400 μg of recombinant His6-tagged antibody fragment were purified by one step affinity chromatography. The material produced by B. megaterium showed an increased specific activity compared to material produced in E. coli. Conclusion High yields of functional scFv antibody fragments can be produced and secreted into the culture medium by B. megaterium, making this production system a reasonable alternative to E. coli. PMID:17224052

  13. Capturing Biological Activity in Natural Product Fragments by Chemical Synthesis

    PubMed Central

    Crane, Erika A.

    2016-01-01

    Abstract Natural products have had an immense influence on science and have directly led to the introduction of many drugs. Organic chemistry, and its unique ability to tailor natural products through synthesis, provides an extraordinary approach to unlock the full potential of natural products. In this Review, an approach based on natural product derived fragments is presented that can successfully address some of the current challenges in drug discovery. These fragments often display significantly reduced molecular weights, reduced structural complexity, a reduced number of synthetic steps, while retaining or even improving key biological parameters such as potency or selectivity. Examples from various stages of the drug development process up to the clinic are presented. In addition, this process can be leveraged by recent developments such as genome mining, antibody–drug conjugates, and computational approaches. All these concepts have the potential to identify the next generation of drug candidates inspired by natural products. PMID:26833854

  14. Production of lunar fragmental material by meteoroid impact.

    NASA Technical Reports Server (NTRS)

    Marcus, A. H.

    1973-01-01

    The rate of production of new fragmental lunar surface material is derived theoretically on the hypothesis that such material is excavated from a bedrock layer by meteoroid impacts. An overlaying regolith effectively shields the bedrock layer from small impacts, reducing the production rate of centimeter-sized and smaller blocks by a large factor. Logarithmic production rate curves for centimeter to motor-sized blocks are nonlinear for any regolith from centimeters to tens of meters in thickness, with small blocks relatively much less frequent for thicker (older) regoliths, suggesting the possibility of a statistical reverse bedding. Modest variations in the exponents of scaling laws for crater depth-diameter ratio and maximum block-diameter to crater diameter ratio are shown to have significant effects on the production rates. The production rate increases slowly with increasing size of the largest crater affecting the region.

  15. Jet production and fragmentation properties in deep inelastic muon scattering

    NASA Astrophysics Data System (ADS)

    Arneodo, M.; Arvidson, A.; Aubert, J. J.; Badelek, B.; Beaufays, J.; Bee, C. P.; Benchouk, C.; Berghoff, G.; Bird, I.; Blum, D.; Böhm, E.; de Bouard, X.; Brasse, F. W.; Braun, H.; Broll, C.; Brown, S.; Brück, H.; Calen, H.; Chima, J. S.; Ciborowski, J.; Clifft, R.; Coignet, G.; Combley, F.; Conrad, J.; Coughlan, J.; D'Agostini, G.; Dahlgren, S.; Dengler, F.; Derado, I.; Dreyer, T.; Drees, J.; Drobnitzki, M.; Düren, M.; Eckardt, V.; Edwards, A.; Edwards, M.; Ernst, T.; Eszes, G.; Favier, J.; Ferrero, M. I.; Figiel, J.; Flauger, W.; Foster, J.; Ftàčnik, J.; Gabathuler, E.; Gajewski, J.; Gamet, R.; Gayler, J.; Geddes, N.; Grafström, P.; Grard, F.; Haas, J.; Hagberg, E.; Hasert, F. J.; Hayman, P.; Heusse, P.; Jaffre, M.; Jacholkowska, A.; Janata, F.; Jancso, G.; Johnson, A. S.; Kabuss, E. M.; Kellner, G.; Korbel, V.; Krüger, A.; Krüger, J.; Kullander, S.; Landgraf, U.; Lanske, D.; Loken, J.; Long, K.; Maire, M.; Malecki, P.; Manz, A.; Maselli, S.; Mohr, W.; Montanet, F.; Montgomery, H. E.; Nagy, E.; Nassalski, J.; Norton, P. R.; Oakham, F. G.; Osborne, A. M.; Pascaud, C.; Pawlik, B.; Payre, P.; Peroni, C.; Peschel, H.; Pessard, H.; Pettingale, J.; Pietrzyk, B.; Pietrzyk, U.; Pönsgen, B.; Pötsch, M.; Renton, P.; Ribarics, P.; Rith, K.; Rondio, E.; Sandacz, A.; Scheer, M.; Schlabböhmer, A.; Schiemann, H.; Schmitz, N.; Schneegans, M.; Scholz, M.; Schröder, T.; Schultze, K.; Sloan, T.; Stier, H. E.; Studt, M.; Taylor, G. N.; Thénard, J. M.; Thompson, J. C.; de La Torre, A.; Toth, J.; Urban, L.; Urban, L.; Wallucks, W.; Whalley, M.; Wheeler, S.; Williams, W. S. C.; Wimpenny, S. J.; Windmolders, R.; Wolf, G.; Ziemons, K.

    1987-12-01

    Results are presented from a study of deep inelastic 280 GeV muon-nucleon interactions on the transverse momenta and jet properties of the final state hadrons. The results are analysed in a way which attempts to separate the contributions of hard and soft QCD effects from those that arise from the fragmentation process. The fragmentation models with which the data are compared are the Lund string model, the independent jet model, the QCD parton shower model including soft gluon interference effects, and the firestring model. The discrimination between these models is discussed. Various methods of analysis of the data in terms of hard QCD processes are presented. From a study of the properties of the jet profiles a value of α s , to leading order, is determined using the Lund string model, namely α s =0.29±0.01 (stat.) ±0.02 (syst.), for Q 2˜20 GeV2.

  16. Modelling evolving fault zones: Fragmentation processes, products and potential implications

    NASA Astrophysics Data System (ADS)

    Mair, K.; Abe, S.

    2011-12-01

    Exhumed fault rocks display a wide variety of textural fabrics whose signatures may provide clues to the deformation processes operating during a fault's life. In an active fault, the products of intense fracturing or the development of strong fabrics can themselves be game changers in terms of macroscopic mechanical behaviour. Here we investigate the fragmentation processes operating in evolving faults during shear and the signatures they leave behind, using a numerical model. We consider: (i) what drives the production and evolution of granular debris commonly found along faults; (ii) the nature of the fragmentation products; and (iii) the potential influence of these features on subsequent sliding. Our discrete element (DEM) 3D fault gouge fragmentation models consist of aggregate grains, composed of several thousand spherical particles stuck together with breakable elastic bonds. The aggregate grains are confined between rough fault walls that can themselves potentially breakup leading to fault roughness evolution. During shear, under a given normal stress, the aggregate gouge grains can fragment and evolve in a somewhat natural way. The grain breakage in our models appears to be driven by two distinct comminution mechanisms: grain splitting and grain abrasion. The relative importance of these mechanisms changes with the applied normal stress, the accumulated slip and the boundary roughness in the model. Grain splitting contributes significantly to comminution at higher normal stresses, particularly during the initial stages of simulations. Conversely, grain abrasion prevails at lower normal stresses and is the main comminution mechanism operating in the later stages of all simulations. In terms of fragmentation products, the different mechanisms generate distinct grain size distributions. Grain splitting rapidly generates a power law size distribution, whereas grain abrasion (acting alone) tends to produce a bimodal size distribution (lacking intermediate

  17. Large-scale production of palindrome DNA fragments

    SciTech Connect

    Palmer, E.L.; Gewiess, A.; Harp, J.M.

    1995-10-10

    Our structural studies of nucleosomes necessitated the production of over 100 mg of a 146-bp perfect palindrome DNA for use in the reconstitution of perfectly symmetrical nucleosome core particles for detailed X-ray crystallographic analysis. The propagation of palindromic DNA sequences by bacterial culture is hindered by the instability of these sequences during bacterial replication and recombination. While the loss of some palindrome sequences can be elminated by the use of sbcB or sbcC mutants of Escherichia coli, not all palindrome-containing plasmids are faithfully maintained by these strains. The production of large quantities of palindrome DNA can therefore be extremely difficult. After trying several approaches, we were able to develop a reliable procedure for production of large quantities of palindrome DNA that involves production of plasmid containing multiple copies of the repeating unit of the palindrome which are isolated by restriction digestion and ligated in vitro to form the palindrome DNA. The procedure has resulted in the production of over 20 mg of a 146-bp DNA fragment in 2 weeks.

  18. LISE++: Exotic beam production with fragment separators and their design

    NASA Astrophysics Data System (ADS)

    Tarasov, O. B.; Bazin, D.

    2016-06-01

    Since the LISE++ code presentation at the EMIS 2007 conference (Tarasov and Bazin, 2008), important improvements have been made in the analytical and Monte Carlo calculations of transmission, and accuracy of reaction product distributions. In this paper new features of the code in ion-beam optics, creation of new LISE++ blocks, and development of some reaction models will be discussed. Large progress has been done in ion-beam optics with the introduction of "elemental" blocks, that allows optical matrices calculation within LISE++. New type of configurations based on these blocks allow a detailed analysis of the transmission, useful for fragment separator design, and can be used for optics optimization based on user constraints.

  19. Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis.

    PubMed Central

    Plikaytis, B B; Plikaytis, B D; Yakrus, M A; Butler, W R; Woodley, C L; Silcox, V A; Shinnick, T M

    1992-01-01

    A two-step assay combining a gene amplification step and a restriction fragment length polymorphism analysis was developed to differentiate the Mycobacterium species that account for greater than 90% of potentially pathogenic isolates and greater than 86% of all isolates in clinical laboratories in the United States. These species are M. tuberculosis, M. bovis, M. avium, M. intracellulare, M. kansasii, and M. gordonae. With lysates of pure cultures as the template, two oligonucleotide primers that amplified an approximately 1,380-bp portion of the hsp65 gene from all 139 strains of 19 Mycobacterium species tested, but not from the 19 non-Mycobacterium species tested, were identified. Digestion of the amplicons from 126 strains of the six most commonly isolated Mycobacterium species with the restriction enzymes BstNI and XhoI in separate reactions generated restriction fragment patterns that were distinctive for each of these species, except for those of M. tuberculosis and M. bovis, which were not distinguishable. By including size standards in each sample, the restriction fragment profiles could be normalized to a fixed distance and the similarities of patterns could be calculated by using a computer-aided comparison program. The availability of this data base should enable the identification of an unknown Mycobacterium strain to the species level by a comparison of the restriction fragment pattern of the unknown with the data base of known patterns. Images PMID:1352786

  20. Alternative downstream processes for production of antibodies and antibody fragments.

    PubMed

    Arakawa, Tsutomu; Tsumoto, Kouhei; Ejima, Daisuke

    2014-11-01

    Protein-A or Protein-L affinity chromatography and virus inactivation are key processes for the manufacturing of therapeutic antibodies and antibody fragments. These two processes often involve exposure of therapeutic proteins to denaturing low pH conditions. Antibodies have been shown to undergo conformational changes at low pH, which can lead to irreversible damages on the final product. Here, we review alternative downstream approaches that can reduce the degree of low pH exposure and consequently damaged product. We and others have been developing technologies that minimize or eliminate such low pH processes. We here cover facilitated elution of antibodies using arginine in Protein-A and Protein-G affinity chromatography, a more positively charged amidated Protein-A, two Protein-A mimetics (MEP and Mabsorbent), mixed-mode and steric exclusion chromatography, and finally enhanced virus inactivation by solvents containing arginine. This article is part of a Special Issue entitled: Recent advances in molecular engineering of antibody. PMID:24859179

  1. DRAGON: Monte Carlo generator of particle production from a fragmented fireball in ultrarelativistic nuclear collisions

    NASA Astrophysics Data System (ADS)

    Tomášik, Boris

    2009-09-01

    within the statistical approach. Momentum spectra integrated over many events can be interpreted as produced from an expanding and locally thermalised fireball. The present Monte Carlo model unifies these approaches: fireball decays into fragments of some characteristic size. The fragments recede from each other as given by the pre-existing expansion of the fireball. They subsequently emit stable and unstable hadrons with momenta generated according to thermal distribution. Resonances then decay and their daughters acquire momenta as dictated by decay kinematics. Solution method: The Monte Carlo generator repeats a loop in which it generates individual events. First, sizes of fragments are generated. Then the fragments are placed within the decaying fireball and their velocities are determined from the one-to-one correspondence between the position and the expansion velocity in the blast wave model. Since hadrons may be emitted from fragments as well as from the remaining bulk fireball, first those from the bulk are generated according to the blast wave model. Then, hadron production from the fragments is treated. Each hadron is generated in the rest frame of the fragment and then boosted to the global frame. Finally, after all directly produced hadrons are generated, resonance decay channels are chosen and the momenta and positions of final state hadrons are determined. Running time: Generation of 100 events can take anything between 2 hours to a couple of days. This depends mainly on the size and density of fragments. Simulations with small fragments may be very slow. At the beginning of a run there is a period of up to 1 hour in which the program calculates thermal weights due to statistical model. This period is long if many species are included in the simulation.

  2. Optical model methods of predicting nuclide production cross sections from heavy ion fragmentation

    NASA Technical Reports Server (NTRS)

    Townsend, L. W.; Ramsey, C. R.; Tripathi, R. K.; Cucinotta, F. A.; Norbury, J. W.; Wilson, J. W. (Principal Investigator)

    1999-01-01

    Quantum mechanical optical potential methods for calculating inclusive isotope and element production cross sections from the fragmenting of heavy nuclei by intermediate- and high-energy protons and heavy ions are presented based upon a modified abrasion-ablation-FSI (frictional spectator interaction) collision model. The abrasion stage is treated as a quantum mechanical knockout process that leaves the residual prefragment in an excited state. Prefragment excitation energies are estimated using a combined liquid drop and FSI method. In ablation the prefragment deexcites by particle and photon emission to produce the final fragment. Contributions from electromagnetic dissociation to single nucleon removal cross sections are incorporated using a Weiszacker-Williams theory that includes electric dipole and electric quadrupole interactions. Estimates of elemental and isotopic production cross sections are in good agreement with published cross section measurements for a variety of projectile-target-beam energy combinations.

  3. Recombinant Kinase Production and Fragment Screening by NMR Spectroscopy.

    PubMed

    Han, Byeonggu; Ahn, Hee-Chul

    2016-01-01

    During the past decade fragment-based drug discovery (FBDD) has rapidly evolved and several drugs or drug candidates developed by FBDD approach are clinically in use or in clinical trials. For example, vemurafenib, a V600E mutated BRAF inhibitor, was developed by utilizing FBDD approach and approved by FDA in 2011. In FBDD, screening of fragments is the starting step for identification of hits and lead generation. Fragment screening usually relies on biophysical techniques by which the protein-bound small molecules can be detected. NMR spectroscopy has been extensively used to study the molecular interaction between the protein and the ligand, and has many advantages in fragment screening over other biophysical techniques. This chapter describes the practical aspects of fragment screening by saturation transfer difference NMR. PMID:26501900

  4. Consistent simulation of direct-photon production in hadron collisions including associated two-jet production

    NASA Astrophysics Data System (ADS)

    Odaka, Shigeru; Kurihara, Yoshimasa

    2016-05-01

    We have developed an event generator for direct-photon production in hadron collisions, including associated 2-jet production in the framework of the GR@PPA event generator. The event generator consistently combines γ + 2-jet production processes with the lowest-order γ + jet and photon-radiation (fragmentation) processes from quantum chromodynamics (QCD) 2-jet production using a subtraction method. The generated events can be fed to general-purpose event generators to facilitate the addition of hadronization and decay simulations. Using the obtained event information, we can simulate photon isolation and hadron-jet reconstruction at the particle (hadron) level. The simulation reasonably reproduces measurement data obtained at the large hadron collider (LHC) concerning not only the inclusive photon spectrum, but also the correlation between the photon and jet. The simulation implies that the contribution of the γ + 2-jet is very large, especially in low photon-pT ( ≲ 50 GeV) regions. Discrepancies observed at low pT, although marginal, may indicate the necessity for the consideration of further higher-order processes. Unambiguous particle-level definition of the photon-isolation condition for the signal events is desired to be given explicitly in future measurements.

  5. More Biological Entities from the Stratosphere Including a Diatom Fragment-Further Evidence for a Space Origin

    NASA Astrophysics Data System (ADS)

    Wainwright, Milton; Rose, Christopher E.; Baker, Alexander J.; Wickramasinghe, N. Chandra

    2013-03-01

    Details of stratosphere-isolated biomorphs are given, including a fragment of a diatom frustule and an inorganic particle-rich mass containing biological filaments. We argue that this mass which is around 300 micron in size is, like the other biological entities shown, too large to have been carried from Earth to the stratosphere. As a result, we conclude that the biological entities arrived from space, probably from comets, and their existence in the stratosphere provides prima facie evidence in support of the Hoyle-Wickramasinghe theory of cometary panspermia.

  6. Methods for producing partially digested restriction DNA fragments and for producing a partially modified PCR product

    DOEpatents

    Wong, Kwong-Kwok

    2000-01-01

    The present invention is an improved method of making a partially modified PCR product from a DNA fragment with a polymerase chain reaction (PCR). In a standard PCR process, the DNA fragment is combined with starting deoxynucleoside triphosphates, a primer, a buffer and a DNA polymerase in a PCR mixture. The PCR mixture is then reacted in the PCR producing copies of the DNA fragment. The improvement of the present invention is adding an amount of a modifier at any step prior to completion of the PCR process thereby randomly and partially modifying the copies of the DNA fragment as a partially modified PCR product. The partially modified PCR product may then be digested with an enzyme that cuts the partially modified PCR product at unmodified sites thereby producing an array of DNA restriction fragments.

  7. 40 CFR 165.63 - Scope of pesticide products included.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 24 2014-07-01 2014-07-01 false Scope of pesticide products included. 165.63 Section 165.63 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE MANAGEMENT AND DISPOSAL Standards for Repackaging Pesticide Products into...

  8. 40 CFR 165.63 - Scope of pesticide products included.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 23 2010-07-01 2010-07-01 false Scope of pesticide products included. 165.63 Section 165.63 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE MANAGEMENT AND DISPOSAL Standards for Repackaging Pesticide Products into...

  9. 40 CFR 165.43 - Scope of pesticide products included.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 24 2014-07-01 2014-07-01 false Scope of pesticide products included. 165.43 Section 165.43 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE MANAGEMENT AND DISPOSAL Refillable Container Standards: Container Design § 165.43...

  10. 40 CFR 165.43 - Scope of pesticide products included.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 23 2010-07-01 2010-07-01 false Scope of pesticide products included. 165.43 Section 165.43 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS PESTICIDE MANAGEMENT AND DISPOSAL Refillable Container Standards: Container Design § 165.43...

  11. The production of antibody fragments and antibody fusion proteins by yeasts and filamentous fungi

    PubMed Central

    Joosten, Vivi; Lokman, Christien; van den Hondel, Cees AMJJ; Punt, Peter J

    2003-01-01

    In this review we will focus on the current status and views concerning the production of antibody fragments and antibody fusion proteins by yeasts and filamentous fungi. We will focus on single-chain antibody fragment production (scFv and VHH) by these lower eukaryotes and the possible applications of these proteins. Also the coupling of fragments to relevant enzymes or other components will be discussed. As an example of the fusion protein strategy, the 'magic bullet' approach for industrial applications, will be highlighted. PMID:12605725

  12. Influence of different liquid-drop-based bindings on lighter mass fragments and entropy production

    NASA Astrophysics Data System (ADS)

    Kumar, Rohit; Shivani; Gautam, Sakshi

    2016-04-01

    We study the production of lighter fragments and associated phenomena within the Quantum Molecular Dynamics (QMD) model. The Minimum Spanning Tree (MST) method is used to identify the pre-clusters. The final stable fragments were identified by imposing binding energy criteria on the fragments formed using the MST method. The effect of different binding energy criteria was investigated by employing various liquid-drop-based binding energy formulae. Though light clusters show significant effect of different binding energies, their associated phenomenon, i.e. entropy production is insensitive towards different binding energy criteria.

  13. Conversion of geothermal waste to commercial products including silica

    DOEpatents

    Premuzic, Eugene T.; Lin, Mow S.

    2003-01-01

    A process for the treatment of geothermal residue includes contacting the pigmented amorphous silica-containing component with a depigmenting reagent one or more times to depigment the silica and produce a mixture containing depigmented amorphous silica and depigmenting reagent containing pigment material; separating the depigmented amorphous silica and from the depigmenting reagent to yield depigmented amorphous silica. Before or after the depigmenting contacting, the geothermal residue or depigmented silica can be treated with a metal solubilizing agent to produce another mixture containing pigmented or unpigmented amorphous silica-containing component and a solubilized metal-containing component; separating these components from each other to produce an amorphous silica product substantially devoid of metals and at least partially devoid of pigment. The amorphous silica product can be neutralized and thereafter dried at a temperature from about 25.degree. C. to 300.degree. C. The morphology of the silica product can be varied through the process conditions including sequence contacting steps, pH of depigmenting reagent, neutralization and drying conditions to tailor the amorphous silica for commercial use in products including filler for paint, paper, rubber and polymers, and chromatographic material.

  14. How are particle production, nucleon emission and target fragment evaporation processes interrelated in hadron-nucleus collisions?

    NASA Technical Reports Server (NTRS)

    Strugalski, Z.

    1985-01-01

    Relations between particle production, nucleon emission, and fragment evaporation processes were searched for in hadron-nucleus collisions. It was stated that: (1) the nucleon emission and target fragment evaporation proceed independently of the particle production process; and (2) relation between multiplicities of the emitted protons and of the evaporated charged fragments is expressed by simple formula.

  15. The SPIDER fission fragment spectrometer for fission product yield measurements

    NASA Astrophysics Data System (ADS)

    Meierbachtol, K.; Tovesson, F.; Shields, D.; Arnold, C.; Blakeley, R.; Bredeweg, T.; Devlin, M.; Hecht, A. A.; Heffern, L. E.; Jorgenson, J.; Laptev, A.; Mader, D.; O`Donnell, J. M.; Sierk, A.; White, M.

    2015-07-01

    The SPectrometer for Ion DEtermination in fission Research (SPIDER) has been developed for measuring mass yield distributions of fission products from spontaneous and neutron-induced fission. The 2E-2v method of measuring the kinetic energy (E) and velocity (v) of both outgoing fission products has been utilized, with the goal of measuring the mass of the fission products with an average resolution of 1 atomic mass unit (amu). The SPIDER instrument, consisting of detector components for time-of-flight, trajectory, and energy measurements, has been assembled and tested using 229Th and 252Cf radioactive decay sources. For commissioning, the fully assembled system measured fission products from spontaneous fission of 252Cf. Individual measurement resolutions were met for time-of-flight (250 ps FWHM), spacial resolution (2 mm FHWM), and energy (92 keV FWHM for 8.376 MeV). Mass yield results measured from 252Cf spontaneous fission products are reported from an E-v measurement.

  16. The SPIDER fission fragment spectrometer for fission product yield measurements

    SciTech Connect

    Meierbachtol, K.; Tovesson, F.; Shields, D.; Arnold, C.; Blakeley, R.; Bredeweg, T.; Devlin, M.; Hecht, A. A.; Heffern, L. E.; Jorgenson, J.; Laptev, A.; Mader, D.; O׳Donnell, J. M.; Sierk, A.; White, M.

    2015-04-01

    The SPectrometer for Ion DEtermination in fission Research (SPIDER) developed for measuring mass yield distributions of fission products from spontaneous and neutron-induced fission. The 2E–2v method of measuring the kinetic energy (E) and velocity (v) of both outgoing fission products utilized, with the goal of measuring the mass of the fission products with an average resolution of 1 atomic mass unit (amu). The SPIDER instrument, consisting of detector components for time-of-flight, trajectory, and energy measurements, assembled and tested using 229Th and 252Cf radioactive decay sources. For commissioning, the fully assembled system measured fission products from spontaneous fission of 252Cf. Finally, individual measurement resolutions were met for time-of-flight (250 ps FWHM), spacial resolution (2 mm FHWM), and energy (92 keV FWHM for 8.376 MeV). These mass yield results measured from 252Cf spontaneous fission products are reported from an E–v measurement.

  17. The SPIDER fission fragment spectrometer for fission product yield measurements

    DOE PAGESBeta

    Meierbachtol, K.; Tovesson, F.; Shields, D.; Arnold, C.; Blakeley, R.; Bredeweg, T.; Devlin, M.; Hecht, A. A.; Heffern, L. E.; Jorgenson, J.; et al

    2015-04-01

    The SPectrometer for Ion DEtermination in fission Research (SPIDER) developed for measuring mass yield distributions of fission products from spontaneous and neutron-induced fission. The 2E–2v method of measuring the kinetic energy (E) and velocity (v) of both outgoing fission products utilized, with the goal of measuring the mass of the fission products with an average resolution of 1 atomic mass unit (amu). The SPIDER instrument, consisting of detector components for time-of-flight, trajectory, and energy measurements, assembled and tested using 229Th and 252Cf radioactive decay sources. For commissioning, the fully assembled system measured fission products from spontaneous fission of 252Cf. Finally,more » individual measurement resolutions were met for time-of-flight (250 ps FWHM), spacial resolution (2 mm FHWM), and energy (92 keV FWHM for 8.376 MeV). These mass yield results measured from 252Cf spontaneous fission products are reported from an E–v measurement.« less

  18. Production of Mass-Separated Fission Fragment Beams at ALTO

    SciTech Connect

    Lebois, M.; Cheikh Mhamed, M.; Curaudeau, J. M.; Ducourtieux, M.; Essabaa, S.; Franchoo, S.; Gales, S.; Guillemaud-Mueller, D.; Ibrahim, F.; Lau, C.; Lesrel, J.; Mueller, A.; Raynaud, M.; Roussiere, B.; Said, A.; Verney, D.; Vogel, C.

    2007-05-22

    Yields of neutron-rich isotopes produced by the photofission were measured at the ISOL ALTO facility. The identification was achieved by a combined measurement of {beta} and {gamma}-rays. Production rates for Xe, Kr, Sn, In and I isotopes are presented here. In parallel, empirical estimations for the yields based on the PARRNe experimental data and the results provided by a very recent FLUKA simulation are presented.

  19. The Effect of Erosion Rate on Hillslope Rock Fragment Production: Implications for Supply of Bedload Material to Channels

    NASA Astrophysics Data System (ADS)

    Marshall, J. A.; Attal, M.; Sklar, L. S.; Riebe, C. S.; Hurst, M. D.; Mudd, S. M.; Yoo, K.

    2009-12-01

    The size distribution, abundance and durability of coarse sediment supplied by hillslopes to channels fundamentally influences channel morphodynamics, including the rate of river incision into bedrock. However, little is known about how hillslope boundary conditions such as erosion rate, climate and lithology, affect the production of bedload-sized rock fragments (> 2mm) on soil-mantled hillslopes. We hypothesize that more rapidly eroding hillslopes should produce larger, more abundant and more durable rock fragments, all else equal, because soils should be thinner, residence times shorter, and soil-producing disturbances such as tree throw more likely to transport unweathered bedrock to the surface. Here we present measurements of soil grain size distributions from three climatically distinct sites in northern California, where erosion rates vary widely within each site. Two of our sites are in granitic terrain in the Sierra Nevada Mountains (Fort Sage and Feather River), where rates of erosion and chemical weathering are constrained from previous measurements of cosmogenic radionuclides exposure ages and insoluble element enrichment. At the third site (Butano Ridge), an asymmetrical ridge underlain by massive sandstone in the Santa Cruz Mountains, we infer variable erosion rates from analysis of topographic curvature and hillslope gradient using a high-resolution LiDAR-derived DEM. We focus on the creep-dominated portion of the landscape to avoid sampling in landscape scars where the size distribution may not reflect long-term average production patterns. Bulk soil samples are taken from pits excavated to below the soil saprolite-bedrock boundary. We then sieve to obtain the full grain-size distribution in the soil column above the saprolite. We are also using laboratory tumbling mills to characterize rock fragment durability and assess the potential for fragment survival as bedload, once delivered to the channel. We find that rock fragment abundance generally

  20. The development of radioimmunoassays for fibrinogen degradation products: fragments D and E.

    PubMed

    Gordon, Y B; Martin, M J; Landon, J; Chard, T

    1975-01-01

    Fibrinogen degradation products, fragment D (FgD) and fragment E (FgE) have been measured in human serum by specific radioimmunoassays. In addition, the appearance of a neoantigenic determinant on FgD, revealed when fibrinogen is degraded by plasmin has been utilized to develop a specific radioimmunoassay for FgD in plasma (FgDneo). The reagents and conditions used in each assay are described in detail. The mean specific activity was 144 muCi/mug for 125I-labelled FgE and 82 muCi/mug for 125I-labelled FgD. Separation of antibody bound and free antigen was achieved using second antibody. The detection limits of the FgE, FgD and FgDneo assays were 0.8, 1.0 and 6.2 ng/ml respectively. The specificity of each assay with respect to fibrinogen and its degradation fragments has been assessed. Fibrinogen and fragment X cross-reacted markedly in both the FgE and FgD assays, whereas the cross-reaction of fibrinogen was abolished in the FgDneo assay, while the cross-reaction of fragment X was 10%, indicating gradual emergence of the neoantigenic site during digestion of fibriogen. The sensitivity, precision, and specificity of the radioimmunoassay systems described have major advantages over the existing procedures for the measurement of fibrinogen degradation products. PMID:1201195

  1. DRAGON: Monte Carlo Generator of Particle Production from a Fragmented Fireball in Ultrarelativistic Nuclear Collisions

    NASA Astrophysics Data System (ADS)

    Tomasik, Boris

    2010-11-01

    A Monte Carlo generator of the final state of hadrons emitted from an ultrarelativistic nuclear collision is introduced. An important feature of the generator is a possible fragmentation of the fireball and emission of the hadrons from fragments. Phase space distribution of the fragments is based on the blast wave model extended to azimuthally non-symmetric fireballs. Parameters of the model can be tuned and this allows to generate final states from various kinds of fireballs. A facultative output in the OSCAR1999A format allows for a comprehensive analysis of phase-space distributions and/or use as an input for an afterburner. DRAGON's purpose is to produce artificial data sets which resemble those coming from real nuclear collisions provided fragmentation occurs at hadronisation and hadrons are emitted from fragments without any further scattering. Its name, DRAGON, stands for DRoplet and hAdron GeneratOr for Nuclear collisions. In a way, the model is similar to THERMINATOR, with the crucial difference that emission from fragments is included.

  2. 40 CFR 165.23 - Scope of pesticide products included.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... this section, a pesticide product must be packaged in compliance with 49 CFR 173.24. If the pesticide product meets the definition of a hazardous material in 49 CFR 171.8, the Department of Transportation requires it to be packaged according to 49 CFR parts 171-180. (f) What does “pesticide product”...

  3. 40 CFR 165.23 - Scope of pesticide products included.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... this section, a pesticide product must be packaged in compliance with 49 CFR 173.24. If the pesticide product meets the definition of a hazardous material in 49 CFR 171.8, the Department of Transportation requires it to be packaged according to 49 CFR parts 171-180. (f) What does “pesticide product”...

  4. 40 CFR 165.23 - Scope of pesticide products included.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... this section, a pesticide product must be packaged in compliance with 49 CFR 173.24. If the pesticide product meets the definition of a hazardous material in 49 CFR 171.8, the Department of Transportation requires it to be packaged according to 49 CFR parts 171-180. (f) What does “pesticide product”...

  5. 40 CFR 165.23 - Scope of pesticide products included.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... this section, a pesticide product must be packaged in compliance with 49 CFR 173.24. If the pesticide product meets the definition of a hazardous material in 49 CFR 171.8, the Department of Transportation requires it to be packaged according to 49 CFR parts 171-180. (f) What does “pesticide product”...

  6. 40 CFR 165.23 - Scope of pesticide products included.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... this section, a pesticide product must be packaged in compliance with 49 CFR 173.24. If the pesticide product meets the definition of a hazardous material in 49 CFR 171.8, the Department of Transportation requires it to be packaged according to 49 CFR parts 171-180. (f) What does “pesticide product”...

  7. 40 CFR 165.63 - Scope of pesticide products included.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... caused by bacteria, viruses, fungi, protozoa, algae, or slime; and (B) In the intended use is subject to... bacteria, viruses, fungi, protozoa, algae, or slime. (ii) The labeling of the pesticide product...

  8. 40 CFR 165.63 - Scope of pesticide products included.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... caused by bacteria, viruses, fungi, protozoa, algae, or slime; and (B) In the intended use is subject to... bacteria, viruses, fungi, protozoa, algae, or slime. (ii) The labeling of the pesticide product...

  9. 40 CFR 165.63 - Scope of pesticide products included.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... caused by bacteria, viruses, fungi, protozoa, algae, or slime; and (B) In the intended use is subject to... bacteria, viruses, fungi, protozoa, algae, or slime. (ii) The labeling of the pesticide product...

  10. Dissociation of CH4 by electron impact: Production of metastable hydrogen and carbon fragments

    NASA Technical Reports Server (NTRS)

    Finn, T. G.; Carnahan, B. L.; Zipf, E. C.

    1974-01-01

    Metastable fragments produced by electron impact excitation of CH4 have been investigated for incident electron energies from threshold to 300 eV. Only metastable hydrogen and carbon atoms were observed. Onset energies for the production of metastable hydrogen atoms were observed at electron impact energies of 22.0 + or - .5 eV, 25.5 + or - .6 eV, 36.7 + or - .6 eV and 66 + or - 3 eV, and at 26.6 + or - .6 eV for the production of metastable carbon atoms. Most of the fragments appear to have been formed in high-lying Rydberg states. The total metastable hydrogen cross section reaches a maximum value of approximately 1 X 10 to the minus 18th power sq cm at 100 eV. At the same energy, the metastable carbon cross section is 2 x 10 to the minus 19th power sq cm.

  11. DNA sequence analyses of blended herbal products including synthetic cannabinoids as designer drugs.

    PubMed

    Ogata, Jun; Uchiyama, Nahoko; Kikura-Hanajiri, Ruri; Goda, Yukihiro

    2013-04-10

    In recent years, various herbal products adulterated with synthetic cannabinoids have been distributed worldwide via the Internet. These herbal products are mostly sold as incense, and advertised as not for human consumption. Although their labels indicate that they contain mixtures of several potentially psychoactive plants, and numerous studies have reported that they contain a variety of synthetic cannabinoids, their exact botanical contents are not always clear. In this study, we investigated the origins of botanical materials in 62 Spice-like herbal products distributed on the illegal drug market in Japan, by DNA sequence analyses and BLAST searches. The nucleotide sequences of four regions were analyzed to identify the origins of each plant species in the herbal mixtures. The sequences of "Damiana" (Turnera diffusa) and Lamiaceae herbs (Mellissa, Mentha and Thymus) were frequently detected in a number of products. However, the sequences of other plant species indicated on the packaging labels were not detected. In a few products, DNA fragments of potent psychotropic plants were found, including marijuana (Cannabis sativa), "Diviner's Sage" (Salvia divinorum) and "Kratom" (Mitragyna speciosa). Their active constituents were also confirmed using gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS), although these plant names were never indicated on the labels. Most plant species identified in the products were different from the plants indicated on the labels. The plant materials would be used mainly as diluents for the psychoactive synthetic compounds, because no reliable psychoactive effects have been reported for most of the identified plants, with the exception of the psychotropic plants named above. PMID:23092848

  12. One pion production in neutrino reactions: Including nonresonant background

    SciTech Connect

    Lalakulich, O.; Leitner, T.; Buss, O.; Mosel, U.

    2010-11-01

    We investigate neutrino-induced one pion production on nucleons. The elementary neutrino-nucleon cross section is calculated as the sum of the leading Delta pole diagram and several background diagrams obtained within the nonlinear sigma model. This approach does not introduce any new adjustable parameters, which allows unambiguous predictions for the observables. Considering electroproduction experiments as benchmark, the model is shown to be applicable up to pion-nucleon invariant mass W<1.4 GeV and provides a good accuracy. With respect to the total one pion cross section, the model predicts the background at the level of 10% for the p{pi}{sup +}, 30% for p{pi}{sup 0}, and 50% for n{pi}{sup +} final states. The results are compared with experimental data for various differential cross sections. Distributions with respect to muon-nucleon and muon-pion invariant masses are presented for the first time. The model describes the data quite well, with the discrepancies being of the same order as those between different data sets.

  13. Earth's 2006 Encounter with Comet 73P/Schwassmann-Wachmann: Products of Nucleus Fragmentation Seen in Closeup

    NASA Technical Reports Server (NTRS)

    Sekanina, Zdenek

    2007-01-01

    The large numbers of nucleus fragments observed are a spectacular illustration of the process of cascading fragmentation in progress, a concept introduced to interpret the properties of the Kreutz system of sungrazers and comet D/1993 F2. The objective is to describe the fragmentation sequence and hierarchy of comet 73P, the nature of the fragmentation process and observed events, and the expected future evolution of this comet. The orbital arc populated by the fragments refers to an interval of 3.74 days in the perihelion time. This result suggests that they all could be products (but not necessarily first-generation fragments) of two 1995 events, in early September (involving an enormous outburst) and at the beginning of November. The interval of perihelion times is equivalent to a range of about 2.5 m/s in separation velocity or 0.00012 the Sun's attraction in nongravitational deceleration. Their combined effect suggests minor orbital momentum changes acquired during fragmentation and decelerations compatible with survival over two revolutions about the Sun. Fragment B is a likely first-generation product of one of the 1995 events. From the behavior of the primary fragment C, 73P is not a dying comet, even though fragment B and others were episodically breaking up into many pieces. Each episode began with the sudden appearance of a starlike nucleus condensation and a rapidly expanding outburst, followed by a development of jets, and a gradual tailward extension of the fading condensation, until the discrete masses embedded in it could be resolved. In April-May, this debris traveled first to the southwest, but models show their eventual motion toward the projected orbit. Fainter fragments were imaged over limited time, apparently because of their erratic activity (interspersed with periods of dormancy) rather than improptu disintegration. A dust trail joining the fragments and reminiscent of comet 141P/Machholz suggests that cascading fragmentation exerts itself

  14. Abuse Liability Assessment of Tobacco Products Including Potential Reduced Exposure Products (PREPs)

    PubMed Central

    Carter, Lawrence P.; Stitzer, Maxine L.; Henningfield, Jack E.; O'Connor, Rich J.; Cummings, K. Michael; Hatsukami, Dorothy K.

    2009-01-01

    The harm produced by tobacco products is a result of frequent use of a highly toxic product. Reducing the adverse public health impact of tobacco products might be most effectively achieved by reducing the likelihood of their use and the toxicity of the products. Products that retain some characteristics of cigarettes, but have been altered with the intention of reducing toxicity have been referred to as modified risk tobacco products or potential reduced exposure products (MRTP/PREPS). Evaluation of their content, emission, and toxicity is discussed in other articles in this special issue. Here, we discuss the methodology that has been used to examine the likelihood of abuse or addiction. Abuse liability assessment (ALA) methodology has been used by the Food and Drug Administration (FDA) and other drug regulatory agencies world-wide for decades to assess the risks posed by a wide variety of pharmacologically active substances. ALA is routinely required among other evaluations of safety during the premarket assessment of new drugs, and is continually adapted to meet the challenges posed by new drug classes and drug formulations. In the 2009 law giving FDA regulation over tobacco products, FDA is now required to evaluate new tobacco products including MRTP/PREPs to determine their risk for abuse and toxicity at the population level. This paper describes the traditional tools and methods of ALA that can be used to evaluate new tobacco and nicotine products including MRTP/PREPs. Such ALA data could contribute to the scientific foundation on which future public policy decisions are based. PMID:19959676

  15. On the relationship between microbubble fragmentation, deflation, and broadband superharmonic signal production

    PubMed Central

    Lindsey, Brooks D.; Rojas, Juan D.; Dayton, Paul A.

    2016-01-01

    Acoustic angiography imaging of microbubble contrast agents utilizes the superharmonic energy produced from excited microbubbles, and enables high-contrast, high-resolution imaging. However, the exact mechanism by which broadband harmonic energy is produced is not fully understood. In order to elucidate the role of microbubble shell fragmentation in superharmonic signal production, simultaneous optical and acoustic measurements were performed on individual microbubbles at transmit frequencies from 1.75 to 3.75 MHz and pressures near the shell fragmentation threshold for microbubbles of varying diameter. High-amplitude, broadband superharmonic signals were produced with shell fragmentation, while weaker signals (approximately 25% of peak amplitude) were observed in the presence of shrinking bubbles. Furthermore, when imaging populations of stationary microbubbles with a dual-frequency ultrasound imaging system, a sharper decline in image intensity with respect to frame number was observed for 1 μm bubbles than for 4 μm bubbles. Finally, in a study of two rodents, increasing frame rate from 4 to 7 Hz resulted in a decrease in mean steady-state image intensity of 27% at 1000 kPa and 29% at 1300 kPa. While the existence of superharmonic signals when bubbles shrink has the potential to prolong the imaging efficacy of microbubbles, parameters such as frame rate and peak pressure must be balanced with expected re-perfusion rate in order to maintain adequate contrast during in vivo imaging. PMID:25766572

  16. Twist-3 fragmentation effects for ALT in light hadron production from proton-proton collisions

    NASA Astrophysics Data System (ADS)

    Koike, Y.; Pitonyak, D.; Takagi, Y.; Yoshida, S.

    2016-01-01

    We compute the contribution from the twist-3 fragmentation function for light hadron production in collisions between transversely and longitudinally polarized protons, i.e., p↑ p → → h X, which can cause a double-spin asymmetry (DSA) ALT. This is a naïve T-even twist-3 observable that we analyze in collinear factorization using both Feynman gauge and lightcone gauge as well as give a general proof of color gauge invariance. So far only twist-3 effects in the transversely polarized proton have been studied for ALT in p↑ p → → h X. However, there are indications that the naïve T-odd transverse single-spin asymmetry (SSA) AN in p↑ p → h X is dominated not by such distribution effects but rather by a fragmentation mechanism. Therefore, one may expect similarly that the fragmentation contribution is important for ALT. Given possible plans at RHIC to measure this observable, it is timely to provide a calculation of this term.

  17. Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication.

    PubMed

    Allard, Pierre-Marie; Péresse, Tiphaine; Bisson, Jonathan; Gindro, Katia; Marcourt, Laurence; Pham, Van Cuong; Roussi, Fanny; Litaudon, Marc; Wolfender, Jean-Luc

    2016-03-15

    Dereplication represents a key step for rapidly identifying known secondary metabolites in complex biological matrices. In this context, liquid-chromatography coupled to high resolution mass spectrometry (LC-HRMS) is increasingly used and, via untargeted data-dependent MS/MS experiments, massive amounts of detailed information on the chemical composition of crude extracts can be generated. An efficient exploitation of such data sets requires automated data treatment and access to dedicated fragmentation databases. Various novel bioinformatics approaches such as molecular networking (MN) and in-silico fragmentation tools have emerged recently and provide new perspective for early metabolite identification in natural products (NPs) research. Here we propose an innovative dereplication strategy based on the combination of MN with an extensive in-silico MS/MS fragmentation database of NPs. Using two case studies, we demonstrate that this combined approach offers a powerful tool to navigate through the chemistry of complex NPs extracts, dereplicate metabolites, and annotate analogues of database entries. PMID:26882108

  18. 76 FR 41525 - Hewlett Packard Global Parts Supply Chain, Global Product Life Cycles Management Unit Including...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-14

    ... Parts Supply Chain, Global Product Life Cycles Management Unit, including teleworkers reporting to... Chain, Global Product Life Cycles Management Unit, including teleworkers reporting to Houston, Texas... Employment and Training Administration Hewlett Packard Global Parts Supply Chain, Global Product Life...

  19. Economic values of production and functional traits, including residual feed intake, in Finnish milk production.

    PubMed

    Hietala, P; Wolfová, M; Wolf, J; Kantanen, J; Juga, J

    2014-02-01

    Improving the feed efficiency of dairy cattle has a substantial effect on the economic efficiency and on the reduction of harmful environmental effects of dairy production through lower feeding costs and emissions from dairy farming. To assess the economic importance of feed efficiency in the breeding goal for dairy cattle, the economic values for the current breeding goal traits and the additional feed efficiency traits for Finnish Ayrshire cattle under production circumstances in 2011 were determined. The derivation of economic values was based on a bioeconomic model in which the profit of the production system was calculated, using the generated steady state herd structure. Considering beef production from dairy farms, 2 marketing strategies for surplus calves were investigated: (A) surplus calves were sold at a young age and (B) surplus calves were fattened on dairy farms. Both marketing strategies were unprofitable when subsidies were not included in the revenues. When subsidies were taken into account, a positive profitability was observed in both marketing strategies. The marginal economic values for residual feed intake (RFI) of breeding heifers and cows were -25.5 and -55.8 €/kg of dry matter per day per cow and year, respectively. The marginal economic value for RFI of animals in fattening was -29.5 €/kg of dry matter per day per cow and year. To compare the economic importance among traits, the standardized economic weight of each trait was calculated as the product of the marginal economic value and the genetic standard deviation; the standardized economic weight expressed as a percentage of the sum of all standardized economic weights was called relative economic weight. When not accounting for subsidies, the highest relative economic weight was found for 305-d milk yield (34% in strategy A and 29% in strategy B), which was followed by protein percentage (13% in strategy A and 11% in strategy B). The third most important traits were calving

  20. Production of stabilized scFv antibody fragments in the E. coli bacterial cytoplasm.

    PubMed

    Vaks, Lilach; Benhar, Itai

    2014-01-01

    Monoclonal antibodies (mAbs) are currently the fastest growing class of therapeutic proteins. Parallel to full-length IgG format the development of recombinant technologies provided the production of smaller recombinant antibody variants. The single-chain variable fragment (scFv) antibody is a minimal form of functional antibody comprised of the variable domains of immunoglobulin light and heavy chains connected by a flexible linker. In most cases, scFvs are expressed in the bacterium E. coli. The production of soluble scFvs under the reducing conditions of the E. coli bacterial cytoplasm is inefficient because of the inability of the disulfide bonds to form. Hence, scFvs are either secreted to the periplasm as soluble proteins or expressed in the cytoplasm as insoluble inclusion bodies and recovered by refolding. The cytoplasmic expression of scFvs as a C-terminal fusion to maltose-binding protein (MBP) provided the high-level production of stable, soluble, and functional fusion protein. The below protocol provides the detailed description of MBP-scFv production in E. coli utilizing two expression systems: pMalc-TNN and pMalc-NHNN. Although the MBP tag does not disrupt the most of antibody activities, the MBP-TNN-scFv product can be cleaved by TEV protease in order to obtain untagged scFv. PMID:24037842

  1. Fragmentation of cosmic-string loops

    NASA Technical Reports Server (NTRS)

    York, Thomas

    1989-01-01

    The fragmentation of cosmic string loops is discussed, and the results of a simulation of this process are presented. The simulation can evolve any of a large class of loops essentially exactly, including allowing fragments that collide to join together. Such reconnection enhances the production of small fragments, but not drastically. With or without reconnections, the fragmentation process produces a collection of nonself-intersecting loops whose typical length is on the order of the persistence length of the initial loop.

  2. Production, purification and biological characterization of mono-PEGylated anti-IL-17A antibody fragments.

    PubMed

    Koussoroplis, Salome-Juliette; Heywood, Sam; Uyttenhove, Catherine; Barilly, Céline; Van Snick, Jacques; Vanbever, Rita

    2013-09-15

    The aim of this study was to maximize the yield of the production of mono-PEGylated anti-interleukin-17A (anti-IL-17A) antibody fragments using large (≥ 20 kDa) polyethylene glycol (PEG) chains. Particular attention was paid to selectively yield mono-PEGylated species to maintain the maximum possible functionality and to simplify the purification. Neutralization of IL-17A by antibody constructs might find application for the treatment of bronchial hyperreactivity. Amino-directed and sulfhydryl-directed PEGylation of the native antibody fragments were compared. The former was selected as it produced the most interesting construct in terms of yield and preservation of biological activity. In particular, the F(ab')2-PEG conjugate with one 40 kDa branched PEG prepared in this study was produced at a 42% yield. The conjugate presented only a slight decrease in its binding activity and in its in vitro inhibitory potency offering interesting perspectives for in vivo studies. PMID:23850622

  3. A 9359 bp fragment from the right arm of Saccharomyces cerevisiae chromosome VII includes the FOL2 and YTA7 genes and three unknown open reading frames.

    PubMed

    Agostoni Carbone, M L; Lucchini, G; Melchioretto, P; Nardese, V; Vanoni, M; Panzeri, L

    1998-04-30

    In the framework of the EU programme for systematic sequencing of the Saccharomyces cervisiae genome we determined the sequence of a 9359 bp fragment of the right arm of chromosome VII. Five open reading frames (ORFs) of at least 300 nucleotides were found in this region. YGR267c encodes a protein with significant similarity to the enzyme GTP-cyclohydrolase I, that controls the first step in the biosynthetic pathway leading to various pterins and shows a high degree of sequence conservation from bacteria to mammals. We have recently demonstrated (Nardese et al., 1996) that YGR267c corresponds to the FOL2 gene, previously localized in the same chromosomal region by genetic mapping. The protein deduced from YGR270w belongs to the superfamily of putative ATPases associated with diverse cellular activities. It corresponds to the YTA7 gene, a member of a set of yeast genes coding for putative ATPases with high similarity to constituents of the 26S protease. The three ORFs YGR266w, YGR268c and YGR269w encode putative products of unknown function, with neither significant similarity to proteins in databases nor recognizable domains. YGR268c and YGR269w are partially overlapping ORFs: YGR268c seems to correspond to a real gene. whereas YGR269w is probably a fortuitous ORF. PMID:9605509

  4. Flare fragmentation and type III productivity in the 1980 June 27 flare

    NASA Technical Reports Server (NTRS)

    Aschwanden, M. J.; Schwartz, R. A.; Benz, A. O.; Lin, R. P.; Pelling, R. M.

    1990-01-01

    Observations of the solar flare on June 27, 1980 were presented, 16:14-16:33 UT, which was observed by a balloon-borne 300 sq cm phoswich hard X-ray detector and by the IKARUS radio spectrometer. This flare shows intense hard X-ray (HXR) emission and an extreme productivity of (at least 754) type III bursts at 200-400 MHz. A linear correlation was found between the type III burst rate and the HXR fluence. The occurrence of about 10 type III bursts/second, and also the even higher rate of millisecond spikes, suggests a high degree of fragmentation in the acceleration region. This high quantization of injected beams, assuming the thick-target model, shows up in a linear relationship between hard X-ray fluence and the type III rate, but not as fine structures in the HXR time profile. The generation of a superhot isothermal HXR component in the decay phase of the flare coincides with the fade-out of type III production.

  5. Synaptic vesicles contain small ribonucleic acids (sRNAs) including transfer RNA fragments (trfRNA) and microRNAs (miRNA)

    PubMed Central

    Li, Huinan; Wu, Cheng; Aramayo, Rodolfo; Sachs, Matthew S.; Harlow, Mark L.

    2015-01-01

    Synaptic vesicles (SVs) are neuronal presynaptic organelles that load and release neurotransmitter at chemical synapses. In addition to classic neurotransmitters, we have found that synaptic vesicles isolated from the electric organ of Torpedo californica, a model cholinergic synapse, contain small ribonucleic acids (sRNAs), primarily the 5′ ends of transfer RNAs (tRNAs) termed tRNA fragments (trfRNAs). To test the evolutionary conservation of SV sRNAs we examined isolated SVs from the mouse central nervous system (CNS). We found abundant levels of sRNAs in mouse SVs, including trfRNAs and micro RNAs (miRNAs) known to be involved in transcriptional and translational regulation. This discovery suggests that, in addition to inducing changes in local dendritic excitability through the release of neurotransmitters, SVs may, through the release of specific trfRNAs and miRNAs, directly regulate local protein synthesis. We believe these findings have broad implications for the study of chemical synaptic transmission. PMID:26446566

  6. Extraction and recovery of pectic fragments from citrus processing waste for co-production with ethanol

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Steam treatment of citrus processing waste (CPW) at 160°C followed by a rapid decompression (steam explosion) at either pH 2.8 or 4.5 provides an efficient and rapid fragmentation of protopectin in CPW and renders a large fraction of fragmented pectins, arabinans, galactans and arabinogalactans solu...

  7. 15 CFR 754.3 - Petroleum products not including crude oil.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 15 Commerce and Foreign Trade 2 2013-01-01 2013-01-01 false Petroleum products not including crude... (Continued) BUREAU OF INDUSTRY AND SECURITY, DEPARTMENT OF COMMERCE EXPORT ADMINISTRATION REGULATIONS SHORT SUPPLY CONTROLS § 754.3 Petroleum products not including crude oil. (a) License requirement. As...

  8. 15 CFR 754.3 - Petroleum products not including crude oil.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 15 Commerce and Foreign Trade 2 2010-01-01 2010-01-01 false Petroleum products not including crude... (Continued) BUREAU OF INDUSTRY AND SECURITY, DEPARTMENT OF COMMERCE EXPORT ADMINISTRATION REGULATIONS SHORT SUPPLY CONTROLS § 754.3 Petroleum products not including crude oil. (a) License requirement. As...

  9. 15 CFR 754.3 - Petroleum products not including crude oil.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 15 Commerce and Foreign Trade 2 2012-01-01 2012-01-01 false Petroleum products not including crude... (Continued) BUREAU OF INDUSTRY AND SECURITY, DEPARTMENT OF COMMERCE EXPORT ADMINISTRATION REGULATIONS SHORT SUPPLY CONTROLS § 754.3 Petroleum products not including crude oil. (a) License requirement. As...

  10. 15 CFR 754.3 - Petroleum products not including crude oil.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 15 Commerce and Foreign Trade 2 2014-01-01 2014-01-01 false Petroleum products not including crude... (Continued) BUREAU OF INDUSTRY AND SECURITY, DEPARTMENT OF COMMERCE EXPORT ADMINISTRATION REGULATIONS SHORT SUPPLY CONTROLS § 754.3 Petroleum products not including crude oil. (a) License requirement. As...

  11. 15 CFR 754.3 - Petroleum products not including crude oil.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... SUPPLY CONTROLS § 754.3 Petroleum products not including crude oil. (a) License requirement. As indicated... required to all destinations, including Canada, for the export of petroleum products, excluding crude oil..., other than crude oil, will be denied, unless the President makes a finding required by the...

  12. Determination of the cross sections for the production of fragments from relativistic nucleus-nucleus interactions. I. Measurements

    SciTech Connect

    Cummings, J.R.; Binns, W.R.; Garrard, T.L.; Israel, M.H.; Klarmann, J.; Stone, E.C.; Waddington, C.J. Department of Physics, Washington, University, St. Louis, MO McDonnell Center for the Space Sciences, Washington University, St. Louis, MO George W. Downs Laboratory, California Institute of Technology, Pasadena, CA )

    1990-12-01

    Relativistic iron, lanthanum, holmium, and gold projectile nuclei with several different energies have been fragmented in targets of polyethylene, carbon, aluminum, copper, and lead. Our detectors cleanly resolve the individual charges of the heaviest of these fragments and provide some limited information on the masses. We have measured 1256 elemental partial cross sections for the production of fragments from interactions in these target materials. Values have been derived for another 417 cross sections in a hydrogen medium. These cross sections depend on the energy and mass of the projectile nuclei as well as on the nature of the target. Total charge-changing cross sections were also found, but only in a composite target, and have been shown to be weakly dependent on energy. The mean mass losses observed for fragments that have lost a few protons show that typically many neutrons are lost with each proton, producing fragment nuclei that must be highly proton rich, and consequently very unstable. The cross sections for charge pickup on heavy targets show a rapid increase with decreasing energy, particularly for the heaviest targets. The systematics of the dependencies of the partial cross sections will be discussed in a companion paper.

  13. Isotopic production cross sections and recoil velocities of spallation-fission fragments in the reaction {sup 238}U(1A GeV)+d

    SciTech Connect

    Pereira, J.; Benlliure, J.; Casarejos, E.; Armbruster, P.; Enqvist, T.; Schmidt, K.-H.; Bernas, M.; Mustapha, B.; Rejmund, F.; Stephan, C.; Taieeb, J.; Tassan-Got, L.; Boudard, A.; Legrain, R.; Leray, S.; Volant, C.; Wlazlo, W.

    2007-01-15

    Fission fragments of 1A GeV{sup 238}U nuclei interacting with a deuterium target have been investigated with the Fragment Separator (FRS) at Gesellschaft fuer Schwerionenforschung (GSI) by measuring their isotopic production cross sections and velocities. Results, along with those obtained recently for spallation-evaporation fragments, provide a comprehensive analysis of the spallation nuclear productions in this reaction. Details about the experimental performance, data reduction and results are presented.

  14. Fungal morphology and fragmentation behavior in a fed-batch Aspergillus oryzae fermentation at the production scale.

    PubMed

    Li, Z J; Shukla, V; Fordyce, A P; Pedersen, A G; Wenger, K S; Marten, M R

    2000-11-01

    It is well known that high-viscosity fermentation broth can lead to mixing and oxygen mass transfer limitations. The seemingly obvious solution for this problem is to increase agitation intensity. In some processes, this has been shown to damage mycelia, affect morphology, and decrease product expression. However, in other processes increased agitation shows no effect on productivity. While a number of studies discuss morphology and fragmentation at the laboratory and pilot scale, there are relatively few publications available for production-scale fungal fermentations. The goal of this study was to assess morphology and fragmentation behavior in large-scale, fed-batch, fungal fermentations used for the production of protein. To accomplish this, a recombinant strain of Aspergillus oryzae was grown in 80 m(3) fermentors at two different gassed, impeller power-levels (one 50% greater than the other). Impeller power is reported as energy dissipation/circulation function (EDCF) and was found to have average values of 29.3 +/- 1.0 and 22.0 +/- 0.3 kW m(-3) s(-1) at high and low power levels, respectively. In all batches, biomass concentration profiles were similar and specific growth rate was < 0.03 h(-1). Morphological data show hyphal fragmentation occurred by both shaving-off of external clump hyphae and breakage of free hyphae. The fragmentation rate constant (k(frag)), determined using a first-order model, was 5.90 and 5.80 h(-1) for high and low power batches, respectively. At the end of each batch, clumps accounted for only 25% of fungal biomass, most of which existed as small, sparsely branched, free hyphal elements. In all batches, fragmentation was found to dominate fungal growth and branching. We speculate that this behavior was due to slow growth of the culture during this fed-batch process. PMID:10992234

  15. Dissociation and Re-Aggregation of Multicell-Ensheathed Fragments Responsible for Rapid Production of Massive Clumps of Leptothrix Sheaths.

    PubMed

    Kunoh, Tatsuki; Nagaoka, Noriyuki; McFarlane, Ian R; Tamura, Katsunori; El-Naggar, Mohamed Y; Kunoh, Hitoshi; Takada, Jun

    2016-01-01

    Species of the Fe/Mn-oxidizing bacteria Leptothrix produce tremendous amounts of microtubular, Fe/Mn-encrusted sheaths within a few days in outwells of groundwater that can rapidly clog water systems. To understand this mode of rapid sheath production and define the timescales involved, behaviors of sheath-forming Leptothrix sp. strain OUMS1 were examined using time-lapse video at the initial stage of sheath formation. OUMS1 formed clumps of tangled sheaths. Electron microscopy confirmed the presence of a thin layer of bacterial exopolymer fibrils around catenulate cells (corresponding to the immature sheath). In time-lapse videos, numerous sheath filaments that extended from the periphery of sheath clumps repeatedly fragmented at the apex of the same fragment, the fragments then aggregated and again elongated, eventually forming a large sheath clump comprising tangled sheaths within two days. In this study, we found that fast microscopic fragmentation, dissociation, re-aggregation and re-elongation events are the basis of the rapid, massive production of Leptothrix sheaths typically observed at macroscopic scales. PMID:27490579

  16. 16 CFR 1203.34 - Product certification and labeling by manufacturers (including importers).

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... manufacturers (including importers). 1203.34 Section 1203.34 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION CONSUMER PRODUCT SAFETY ACT REGULATIONS SAFETY STANDARD FOR BICYCLE HELMETS Certification § 1203... “Complies with U.S. CPSC Safety Standard for Bicycle Helmets for Persons Age 5 and Older” or “Complies...

  17. 16 CFR 1203.34 - Product certification and labeling by manufacturers (including importers).

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... manufacturers (including importers). 1203.34 Section 1203.34 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION CONSUMER PRODUCT SAFETY ACT REGULATIONS SAFETY STANDARD FOR BICYCLE HELMETS Certification § 1203... “Complies with U.S. CPSC Safety Standard for Bicycle Helmets for Persons Age 5 and Older” or “Complies...

  18. 16 CFR 1203.34 - Product certification and labeling by manufacturers (including importers).

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... manufacturers (including importers). 1203.34 Section 1203.34 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION CONSUMER PRODUCT SAFETY ACT REGULATIONS SAFETY STANDARD FOR BICYCLE HELMETS Certification § 1203... “Complies with U.S. CPSC Safety Standard for Bicycle Helmets for Persons Age 5 and Older” or “Complies...

  19. 16 CFR 1203.34 - Product certification and labeling by manufacturers (including importers).

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... manufacturers (including importers). 1203.34 Section 1203.34 Commercial Practices CONSUMER PRODUCT SAFETY COMMISSION CONSUMER PRODUCT SAFETY ACT REGULATIONS SAFETY STANDARD FOR BICYCLE HELMETS Certification § 1203... “Complies with U.S. CPSC Safety Standard for Bicycle Helmets for Persons Age 5 and Older” or “Complies...

  20. 76 FR 34271 - Hewlett Packard, Global Parts Supply Chain, Global Product Life Cycles Management Unit, Including...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-13

    ... workers of Hewlett Packard, Global Parts Supply Chain, Global Product Life Cycles Management Unit... Employment and Training Administration Hewlett Packard, Global Parts Supply Chain, Global Product Life Cycles... Supply Chain Group, including leased workers from QFlex, North America Logistics and UPS...

  1. 75 FR 43565 - Johns Manville; Engineered Products Division, Including On-Site Leased Workers From Volt...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-26

    ... Employment and Training Administration Johns Manville; Engineered Products Division, Including On-Site Leased... reconsideration, I determine that workers of Johns Manville, Engineered Products Division, Spartanburg, South... with Section 223 of the Act, 19 U.S.C. 2273, I make the following certification: All workers of...

  2. 75 FR 43557 - Wire Products Company, Inc., Including Workers Whose Unemployment Insurance (UI) Wages Are Paid...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-26

    ... Register on May 28, 2010 (75 FR 30067). At the request of a company official, the Department reviewed the... Employment and Training Administration Wire Products Company, Inc., Including Workers Whose Unemployment... unemployment insurance (UI) tax account under the name Globe Pipe Hanger Products, Inc. Based on these...

  3. Anethole induces apoptotic cell death accompanied by reactive oxygen species production and DNA fragmentation in Aspergillus fumigatus and Saccharomyces cerevisiae.

    PubMed

    Fujita, Ken-Ichi; Tatsumi, Miki; Ogita, Akira; Kubo, Isao; Tanaka, Toshio

    2014-02-01

    trans-Anethole (anethole), a major component of anise oil, has a broad antimicrobial spectrum, and antimicrobial activity that is weaker than that of other antibiotics on the market. When combined with polygodial, nagilactone E, and n-dodecanol, anethole has been shown to possess significant synergistic antifungal activity against a budding yeast, Saccharomyces cerevisiae, and a human opportunistic pathogenic yeast, Candida albicans. However, the antifungal mechanism of anethole has not been completely determined. We found that anethole stimulated cell death of a human opportunistic pathogenic fungus, Aspergillus fumigatus, in addition to S. cerevisiae. The anethole-induced cell death was accompanied by reactive oxygen species production, metacaspase activation, and DNA fragmentation. Several mutants of S. cerevisiae, in which genes related to the apoptosis-initiating execution signals from mitochondria were deleted, were resistant to anethole. These results suggest that anethole-induced cell death could be explained by oxidative stress-dependent apoptosis via typical mitochondrial death cascades in fungi, including A. fumigatus and S. cerevisiae. PMID:24393541

  4. 76 FR 14101 - Meadwestvaco Corporation, Consumer and Office Products Division, Including On-Site Leased Workers...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-15

    ..., Including On-Site Leased Workers From Pro-Tel People, Sidney, NY; Amended Certification Regarding... Corporation, Consumer and Office Products Division, including on-site leased workers from Pro-Tel People... published in the Federal Register on September 3, 2008 (73 FR 51529). In order to avoid an overlap in...

  5. Production and characterization of a single chain variable fragment (scFv) for the mycotoxin deoxynivalenol

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Deoxynivalenol (DON)is a mycotoxin produced by certain fungi that infest cereal grains worldwide. A hybridoma cell line producing a monoclonal antibody (Mab) recognizing DON was used as the starting point in the development of a recombinant single chain variable fragment (scFv) antibody. The scFv wa...

  6. Chemically Modified N-Acylated Hyaluronan Fragments Modulate Proinflammatory Cytokine Production by Stimulated Human Macrophages*

    PubMed Central

    Babasola, Oladunni; Rees-Milton, Karen J.; Bebe, Siziwe; Wang, Jiaxi; Anastassiades, Tassos P.

    2014-01-01

    Low molecular mass hyaluronans are known to induce inflammation. To determine the role of the acetyl groups of low molecular mass hyaluronan in stimulating the production of proinflammatory cytokines, partial N-deacetylation was carried out by hydrazinolysis. This resulted in 19.7 ± 3.5% free NH2 functional groups, which were then acylated by reacting with an acyl anhydride, including acetic anhydride. Hydrazinolysis resulted in bond cleavage of the hyaluronan chain causing a reduction of the molecular mass to 30–214 kDa. The total NH2 and N-acetyl moieties in the reacetylated hyaluronan were 0% and 98.7 ± 1.5% respectively, whereas for butyrylated hyaluronan, the total NH2, N-acetyl, and N-butyryl moieties were 0, 82.2 ± 4.6, and 22.7 ± 3.8%, respectively, based on 1H NMR. We studied the effect of these polymers on cytokine production by cultured human macrophages (THP-1 cells). The reacetylated hyaluronan stimulated proinflammatory cytokine production to levels similar to LPS, whereas partially deacetylated hyaluronan had no stimulatory effect, indicating the critical role of the N-acetyl groups in the stimulation of proinflammatory cytokine production. Butyrylated hyaluronan significantly reduced the stimulatory effect on cytokine production by the reacetylated hyaluronan or LPS but had no stimulatory effect of its own. The other partially N-acylated hyaluronan derivatives tested showed smaller stimulatory effects than reacetylated hyaluronan. Antibody and antagonist experiments suggest that the acetylated and partially butyrylated lower molecular mass hyaluronans exert their effects through the TLR-4 receptor system. Selectively N-butyrylated lower molecular mass hyaluronan shows promise as an example of a novel semisynthetic anti-inflammatory molecule. PMID:25053413

  7. Fragmentation study of iridoid glycosides including epimers by liquid chromatography-diode array detection/electrospray ionization mass spectrometry and its application in metabolic fingerprint analysis of Gardenia jasminoides Ellis.

    PubMed

    Zhou, Tingting; Liu, Hua; Wen, Jun; Fan, Guorong; Chai, Yifeng; Wu, Yutian

    2010-09-15

    A high-performance liquid chromatography-diode array detection/electrospray ionization mass spectrometry (HPLC-DAD/ESI-MS) method was applied to the characterization of ten iridoid glycosides in Gardenia jasminoides Ellis, a traditional Chinese medicine. During the process of structural elucidation, two groups of isomers including two epimers were structurally characterized and differentiated according to their distinctive fragmentation patterns which were closely related to their isomeric differentiations. Subsequently, the major compounds were purified by multi-dimensional chromatography and semi-preparative HPLC and the structure identification was confirmed with NMR techniques. The major fragmentation pathways of iridoid glycosides in Gardenia jasminoides Ellis obtained through the MS data were schemed systematically, which provided the best sensitivity and specificity for characterization of the iridoid glycosides especially the isomers so far. Based on the fragmentation patterns of iridoid glycosides concluded, seven major iridoid glycosides were characterized in rat plasma after intravenous administration of Gardenia jasminoides Ellis. PMID:20740525

  8. Kinetic modeling of rhamnolipid production by Pseudomonas aeruginosa PAO1 including cell density-dependent regulation.

    PubMed

    Henkel, Marius; Schmidberger, Anke; Vogelbacher, Markus; Kühnert, Christian; Beuker, Janina; Bernard, Thomas; Schwartz, Thomas; Syldatk, Christoph; Hausmann, Rudolf

    2014-08-01

    The production of rhamnolipid biosurfactants by Pseudomonas aeruginosa is under complex control of a quorum sensing-dependent regulatory network. Due to a lack of understanding of the kinetics applicable to the process and relevant interrelations of variables, current processes for rhamnolipid production are based on heuristic approaches. To systematically establish a knowledge-based process for rhamnolipid production, a deeper understanding of the time-course and coupling of process variables is required. By combining reaction kinetics, stoichiometry, and experimental data, a process model for rhamnolipid production with P. aeruginosa PAO1 on sunflower oil was developed as a system of coupled ordinary differential equations (ODEs). In addition, cell density-based quorum sensing dynamics were included in the model. The model comprises a total of 36 parameters, 14 of which are yield coefficients and 7 of which are substrate affinity and inhibition constants. Of all 36 parameters, 30 were derived from dedicated experimental results, literature, and databases and 6 of them were used as fitting parameters. The model is able to describe data on biomass growth, substrates, and products obtained from a reference batch process and other validation scenarios. The model presented describes the time-course and interrelation of biomass, relevant substrates, and products on a process level while including a kinetic representation of cell density-dependent regulatory mechanisms. PMID:24770383

  9. 76 FR 68785 - Certain Communications Equipment, Components Thereof, and Products Containing the Same, Including...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-07

    ...Notice is hereby given that the U.S. International Trade Commission has received a complaint entitled In Re Certain Communications Equipment, Components Thereof, and Products Containing the Same, Including Power Over Ethernet Telephones, Switches, Wireless Access Points, Routers and Other Devices Used in WLANs and Cameras, DN 2853; the Commission is soliciting comments on any public interest......

  10. 76 FR 76434 - Certain Integrated Circuits, Chipsets, and Products Containing Same Including Televisions...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-07

    ...Notice is hereby given that the U.S. International Trade Commission has received a complaint entitled In Re Certain Integrated Circuits, Chipsets, And Products Containing Same including Televisions, DN 2860; the Commission is soliciting comments on any public interest issues raised by the...

  11. 77 FR 48550 - Technicolor Creative Services, Post Production Feature Mastering Division Including On-Site...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-08-14

    ... From the Federal Register Online via the Government Publishing Office ] DEPARTMENT OF LABOR Employment and Training Administration Technicolor Creative Services, Post Production Feature Mastering Division Including On-Site Leased Workers From Ajilon Professional Staffing and KForce, Hollywood, CA; Notice of Affirmative Determination...

  12. 78 FR 68861 - Certain Navigation Products, Including GPS Devices, Navigation and Display Systems, Radar Systems...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-15

    ..., Navigational Aids, Mapping Systems and Related Software; Institution of Investigation Pursuant to 19 U.S.C... and display systems, radar systems, navigational aids, mapping systems and related software by reason... products, including GPS devices, navigation and display systems, radar systems, navigational aids,...

  13. 76 FR 14100 - Electrolux Home Products, Inc., Electrolux Major Appliances Division Including On-Site Leased...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-15

    ... 19, 2009 (74 FR 41935). The notice was amended on January 21, 2011 to include on-site leased workers from Per Mar Security. The notice was published in the Federal Register on February 2, 2011 (76 FR 5832... Employment and Training Administration Electrolux Home Products, Inc., Electrolux Major Appliances...

  14. 43 CFR 3106.4-2 - Transfers of other interests, including royalty interests and production payments.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Transfers of other interests, including royalty interests and production payments. 3106.4-2 Section 3106.4-2 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR...

  15. 43 CFR 3106.4-2 - Transfers of other interests, including royalty interests and production payments.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Transfers of other interests, including royalty interests and production payments. 3106.4-2 Section 3106.4-2 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR...

  16. 43 CFR 3106.4-2 - Transfers of other interests, including royalty interests and production payments.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Transfers of other interests, including royalty interests and production payments. 3106.4-2 Section 3106.4-2 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR...

  17. 43 CFR 3106.4-2 - Transfers of other interests, including royalty interests and production payments.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Transfers of other interests, including royalty interests and production payments. 3106.4-2 Section 3106.4-2 Public Lands: Interior Regulations Relating to Public Lands (Continued) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR...

  18. Simplex and duplex polymerase chain reaction analysis of Herculex RW (59122) maize based on one reference molecule including separated fragments of 5' integration site and endogenous gene.

    PubMed

    Li, Xiang; Yang, Litao; Zhang, Jianzhong; Wang, Shu; Shen, Kailin; Pan, Liangwen; Zhang, Dabing

    2009-01-01

    Reference molecules, as positive controls and calibrators, have been recently developed in genetically modified organism analysis as a potential substitute for reference materials derived from plant raw materials. In this study, a novel reference molecule p59122, including the revealed 5' integration sequence of maize Herculex RW (59122), was constructed that was suitable for simplex and duplex event-specific qualitative and quantitative PCR detections. The LOD values were 10 copies both for simplex and duplex qualitative PCR when p59122 was used as the calibrator. These values were comparable to those of using genomic DNA samples with 0.01 and 0.05%, approximately 5 and 25 hyploid genomic DNA copies, respectively. The absolute LOD and LOQ values were confirmed to be as low as 10 and 25 copies of p59122 DNA both in simplex and duplex quantitative systems. Furthermore, ideal quantification data with low bias, SD and RSD values were obtained from the practical samples analyses in simplex and duplex real-time PCR systems using the reference molecule p59122 as a calibrator. All these results suggested that the developed reference molecule p59122 and the qualitative and quantitative PCR detection methods are suitable for identification and quantification of GM maize 59122 and its derived products. PMID:19916386

  19. Cell-free production of Gaussia princeps luciferase – antibody fragment bioconjugates for ex vivo detection of tumor cells

    PubMed Central

    Patel, Kedar G.; Ng, Patrick P.; Kuo, Chiung-Chi; Levy, Shoshana; Levy, Ronald; Swartz, James R.

    2016-01-01

    Antibody fragments (scFvs) fused to luciferase reporter proteins have been used as highly sensitive optical imaging probes. Gaussia princeps luciferase (GLuc) is an attractive choice for a reporter protein because it is small and bright and does not require ATP to stimulate bioluminescence-producing reactions. Both GLuc and scFv proteins contain multiple disulfide bonds, and consequently the production of active and properly folded GLuc–scFv fusions is challenging. We therefore produced both proteins individually in active form, followed by covalent coupling to produce the intended conjugate. We used an Escherichia coli-based cell-free protein synthesis (CFPS) platform to produce GLuc and scFv proteins containing non-natural amino acids (nnAAs) for subsequent conjugation by azide–alkyne click chemistry. GLuc mutants with exposed alkyne reactive groups were produced by global replacement of methionine residues in CFPS. Antibody fragment scFvs contained a single exposed azide group using a scheme for site-specific incorporation of tyrosine analogs. Incorporation of tyrosine analogs at specific sites in proteins was performed using an engineered orthogonal tRNA–tRNA synthetase pair from an archaebacterium. The unique azide and alkyne side chains in GLuc and the antibody fragment scFv facilitated conjugation by click chemistry. GLuc–scFv conjugates were shown to differentiate between cells expressing a surface target of the scFv and cells that did not carry this marker. PMID:19852937

  20. Stimulation of fibrinogen synthesis in cultured rat hepatocytes by fibrinogen degradation product fragment D.

    PubMed Central

    LaDuca, F M; Tinsley, L A; Dang, C V; Bell, W R

    1989-01-01

    The direct stimulation of fibrinogen biosynthesis by fibrinogen degradation produces (FDPs) was studied in rat hepatocyte cultures. Pure rat FDP fragment D (FDP-D) (Mr 90,000) and FDP fragment E (FDP-E) (Mr 40,000) and mixtures of the two (FDP-DE) were added to rat hepatocytes cultured in serum-free hormonally defined medium. Hydrocortisone (20 microM) significantly increased synthesis of fibrinogen, as determined by incorporation of [35S]methionine. FDP-D and FDP-E did not increase fibrinogen synthesis in the presence of hydrocortisone. However, hepatocytes cultured without hydrocortisone displayed increased fibrinogen synthesis (2.0- to 2.8-fold) with FDP-D (2.6-6.7 microM) but not with FDP-E (5.7 microM). At these FDP concentrations the synthesis of albumin, haptoglobin, and transferrin was not increased. FDP-D-induced fibrinogen synthesis was inhibited (greater than 90%) by actinomycin D and cycloheximide, indicating that the increase in [35S]methionine incorporation was from de novo protein synthesis. The role of FDP-D was further substantiated by showing that FDP-D, but not FDP-E, bound to the hepatocytes. These data indicate that FDP-D, but not FDP-E, directly and specifically stimulates fibrinogen synthesis in rat hepatocytes; this stimulation does not require any additional serum or protein cofactors. Images PMID:2813424

  1. cc¯ pair production in proton-proton collisions including subdominant terms

    NASA Astrophysics Data System (ADS)

    Łuszczak, M.; Szczurek, A.

    2011-10-01

    For the cc¯ production at high-energies the gluon-gluon fusion is the dominant mechanism. This process was calculated in the NLO collinear as well as in the k-factorisation approaches in the past. We show that the present knowledge of gluon distributions does not allow to make precise predictions for cc¯ production at LHC. Next, we study production of cc¯ pairs including following subprocesses: gg→QQ¯, γg→QQ¯, gγ→QQ¯, γγ→QQ¯. In this context we use MRST-QED (Martin, Roberts, Stirling, Thorne) parton distributions which include photon as a parton in the proton. We include also elastic contributions (single proton in the final state) within the equivalent photon approximation. We present distributions in c ( c¯) rapidity and transverse momenta and compare them with the dominant gluon-gluon fusion contribution. We discuss also single and central diffractive processes using diffractive parton distribution found from the analysis of HERA data. As in the previous case we present distribution in c ( c¯) rapidity and transverse momentum.

  2. Shielding and fragmentation studies.

    PubMed

    Zeitlin, C; Guetersloh, S; Heilbronn, L; Miller, J

    2005-01-01

    Radiation dosimetry for manned spaced missions depends on the ability to adequately describe the process of high-energy ion transport through many materials. Since the types of possible nuclear interactions are many and complex, transport models are used which depend upon a reliable source of experimental data. To expand the heavy ion database used in the models we have been measuring charge-changing cross sections and fragment production cross sections from heavy-ion interactions in various elementa targets. These include materials flown on space missions such as carbon and aluminium, as well as those important in radiation dosimetry such as hydrogen, nitrogen and water. Measuring heavy-ion fragmentation through these targets also gives us the ability to determine the effectiveness of new materials proposed for shielding such as graphite composites and polyethylene hybrids. Measurement without a target present gives an indication of the level of contamination of the primary beam, which is also important in radiobiology experiments. PMID:16604611

  3. Single cell analysis applied to antibody fragment production with Bacillus megaterium: development of advanced physiology and bioprocess state estimation tools

    PubMed Central

    2011-01-01

    Background Single cell analysis for bioprocess monitoring is an important tool to gain deeper insights into particular cell behavior and population dynamics of production processes and can be very useful for discrimination of the real bottleneck between product biosynthesis and secretion, respectively. Results Here different dyes for viability estimation considering membrane potential (DiOC2(3), DiBAC4(3), DiOC6(3)) and cell integrity (DiBAC4(3)/PI, Syto9/PI) were successfully evaluated for Bacillus megaterium cell characterization. It was possible to establish an appropriate assay to measure the production intensities of single cells revealing certain product secretion dynamics. Methods were tested regarding their sensitivity by evaluating fluorescence surface density and fluorescent specific concentration in relation to the electronic cell volume. The assays established were applied at different stages of a bioprocess where the antibody fragment D1.3 scFv production and secretion by B. megaterium was studied. Conclusions It was possible to distinguish between live, metabolic active, depolarized, dormant, and dead cells and to discriminate between high and low productive cells. The methods were shown to be suitable tools for process monitoring at single cell level allowing a better process understanding, increasing robustness and forming a firm basis for physiology-based analysis and optimization with the general application for bioprocess development. PMID:21496219

  4. Antithrombin III and fibrinogen degradation product (fragment E) in diabetic nephropathy.

    PubMed

    Chan, V; Yeung, C K; Chan, T K

    1982-06-01

    Plasma antithrombin III (AtIII), serum fragment E (FgE) and urine AtIII and FgE were measured in 25 diabetic patients with proteinuria above 1 g per day and compared to that in 25 patients with non-diabetic nephropathy, matched for the degree of proteinuria. Plasma AtIII concentrations were normal in both groups but FgE concentrations were increased. The level of plasma AtIII was directly related to HbA1 concentrations in the diabetics. For the same degree of proteinuria, the diabetic patients lost more AtIII and FgE in the urine. Urine AtIII was found to be mostly bound to activated procoagulants. Both urine AtIII and urine FgE correlated inversely with creatinine clearance. It was concluded that intraglomerular thrombosis probably contributes to the deteriorating renal function in diabetic nephropathy and is reflected in the concentrations of urine AtIII and FgE. PMID:7085916

  5. Antithrombin III and fibrinogen degradation product (fragment E) in diabetic nephropathy.

    PubMed Central

    Chan, V; Yeung, C K; Chan, T K

    1982-01-01

    Plasma antithrombin III (AtIII), serum fragment E (FgE) and urine AtIII and FgE were measured in 25 diabetic patients with proteinuria above 1 g per day and compared to that in 25 patients with non-diabetic nephropathy, matched for the degree of proteinuria. Plasma AtIII concentrations were normal in both groups but FgE concentrations were increased. The level of plasma AtIII was directly related to HbA1 concentrations in the diabetics. For the same degree of proteinuria, the diabetic patients lost more AtIII and FgE in the urine. Urine AtIII was found to be mostly bound to activated procoagulants. Both urine AtIII and urine FgE correlated inversely with creatinine clearance. It was concluded that intraglomerular thrombosis probably contributes to the deteriorating renal function in diabetic nephropathy and is reflected in the concentrations of urine AtIII and FgE. Images PMID:7085916

  6. Influence of coalescence parameters on the production of protons and Helium-3 fragments

    NASA Astrophysics Data System (ADS)

    Li, QingFeng; Wang, YongJia; Wang, XiaoBao; Shen, CaiWan

    2016-07-01

    The time evolution of protons and 3He fragments from Au+Au/Pb+Pb reactions at 0.25, 2, and 20 GeV/nucleon is investigated with the potential version of the Ultrarelativistic Quantum Molecular Dynamics (UrQMD) model combined with the traditional coalescence afterburner. In the coalescence process, the relative distance R 0 and relative momentum P 0 are surveyed in the range of 3-4 fm and 0.25-0.35 GeV/c, respectively. For both clusters, a strong reversed correlation between R 0 and P 0 is seen and it is time-dependent as well. For protons, the accepted ( R 0, P 0) bands lie in the time interval 30-60 fm/c, while for 3He, a longer time evolution (at about 60-90 fm/c) is needed. Otherwise, much smaller R 0 and P 0 values should be chosen. If we further look at the rapidity distributions from both central and semi-central collisions, it is found that the accepted [ t cut, ( R 0, P 0)] assemble can provide consistent results for proton yield and collective flows especially at mid-rapdities, while for 3He, the consistency is destroyed at both middle and projectile-target rapidities.

  7. Phase analysis in single-chain variable fragment production by recombinant Pichia pastoris based on proteomics combined with multivariate statistics.

    PubMed

    Fujiki, Yuya; Kumada, Yoichi; Kishimoto, Michimasa

    2015-08-01

    The proteomics technique, which consists of two-dimensional gel electrophoresis (2-DE), peptide mass fingerprinting (PMF), gel image analysis, and multivariate statistics, was applied to the phase analysis of a fed-batch culture for the production of a single-chain variable fragment (scFv) of an anti-C-reactive protein (CRP) antibody by Pichia pastoris. The time courses of the fed-batch culture were separated into three distinct phases: the growth phase of the batch process, the growth phase of the fed-batch process, and the production phase of the fed-batch process. Multivariate statistical analysis using 2-DE gel image analysis data clearly showed the change in the culture phase and provided information concerning the protein expression, which suggested a metabolic change related to cell growth and production during the fed-batch culture. Furthermore, specific proteins, such as alcohol oxidase, which is strongly related to scFv expression, and proteinase A, which could biodegrade scFv in the latter phases of production, were identified via the PMF method. The proteomics technique provided valuable information about the effect of the methanol concentration on scFv production. PMID:25636980

  8. DEVELOPMENT OF A PRODUCT MODEL FOR CUT-AND-COVER TUNNELS INCLUDING DEGRADATIONS

    NASA Astrophysics Data System (ADS)

    Aruga, Takashi; Yabuki, Nobuyoshi; Arai, Yasushi

    Cut-and-Cover tunnels are constructed on site. The various conditions of environments and techniques of construction make a significant influence on the quality of the tunnel. It is extremely difficult to rebuild the tunnel even if a structural trouble is found once the construction is completed. Thus, suitable maintenance is needed to ensure the tunnel is in a healthy condition. To execute better maintenance, the information on design and construction of the tunnel is vital for inspection of degradation, estimation of occurrence factors and planning of repair or refurbishing works. In this paper, we developed a product model for representing cut-and-cover tunnels including degradations for effective information use in maintenance work. As its first step, we investigated the characteristics of cut-and-cover tunnels and degradations about reinforced concrete members and developed a conceptual model. Then, we implemented the conceptual product model by expanding Industry Foundation Classes (IFC). Finally, we verified the product model by applying it to a simple tunnel.

  9. Experiences integrating productivity, pollution prevention, and energy conservation including case studies

    SciTech Connect

    Kasten, D.J.; Muller, M.R.; Barnish, T.J.

    1997-07-01

    , or even space to expand operations. An intimate knowledge of a corporations' burden, market share, and financial stability is necessary in order for the assessment team to gain the confidence of management; failure to do so can be disastrous. Excessive movement, redundant inspections, scheduling issues, and floor layout are critical issues, and ones that are sometimes impossible to evaluate during a short visit to a plant. Before an energy audit is made, much information must be gathered, such as tax rates and purchasing policies (including acceptable defect rates of the raw materials from suppliers). These issues are forcing the one-dimensional energy expert to expand into previously unchartered territories. This paper will attempt to illustrate some generic necessities, but also use actual experiences of the Office of Industrial Productivity and Energy Assessment team at Rutgers University in three facilities to highlight the industrial triage method of presenting the client with an integrated package of analysis of the efficiency of their production facility and methods.

  10. Productivity of the spruce grouse in fragmented habitat at the edge of its range

    USGS Publications Warehouse

    Whitcomb, S.D.; O'Connell, A.F., Jr.; Servello, F.A.

    1996-01-01

    We measured productivity of the Spruce Grouse (Dendragapusc anadensicsa nadensis) in patchy black spruce (Picea mariana) habitat along the southeastern limit of its range in mid-coastal Maine. We captured grouse and attached necklace-mounted radio transmitters to hens prior to nesting. Of 19 females monitored, only 26% raised chicks to the late brood-rearing period. Predation was high on hens (37%) and five were killed before hatching eggs. Six (55%) entire broods were lost and only 30% of chicks survived to late summer. Production ( No. of chicks/female), an index of productivity, was < 1 and lower in Maine and Minnesota study areas in black spruce than areas dominated by jack pine (Pinus banksiana) or a mixture of jack pine and spruce with dense undergrowth. Where Spruce Grouse breed in patchy black spruce communities, immigration from neighboring populations or inter-patch movement by local individuals may be required to maintain viable populations.

  11. Challenges for Life Support Systems in Space Environments, Including Food Production

    NASA Technical Reports Server (NTRS)

    Wheeler, Raymond M.

    2012-01-01

    Environmental Control and Life Support Systems (ECLSS) refer to the technologies needed to sustain human life in space environments. Histor ically these technologies have focused on providing a breathable atmo sphere, clean water, food, managing wastes, and the associated monitoring capabilities. Depending on the space agency or program, ELCSS has sometimes expanded to include other aspects of managing space enviro nments, such as thermal control, radiation protection, fire detection I suppression, and habitat design. Other times, testing and providing these latter technologies have been associated with the vehicle engi neering. The choice of ECLSS technologies is typically driven by the mission profile and their associated costs and reliabilities. These co sts are largely defined by the mass, volume, power, and crew time req uirements. For missions close to Earth, e.g., low-Earth orbit flights, stowage and resupply of food, some 0 2, and some water are often the most cost effective option. But as missions venture further into spa ce, e.g., transit missions to Mars or asteroids, or surface missions to Moon or Mars, the supply line economics change and the need to clos e the loop on life support consumables increases. These are often ref erred to as closed loop or regenerative life support systems. Regardless of the technologies, the systems must be capable of operating in a space environment, which could include micro to fractional g setting s, high radiation levels, and tightly closed atmospheres, including perhaps reduced cabin pressures. Food production using photosynthetic o rganisms such as plants by nature also provides atmospheric regenerat ion (e.g., CO2 removal and reduction, and 0 2 production), yet to date such "bioregenerative" technologies have not been used due largely t o the high power requirements for lighting. A likely first step in te sting bioregenerative capabilities will involve production of small a mounts of fresh foods to supplement to crew

  12. Process for treating spent catalyst including antimony halides from chlorofluorocarbon production

    SciTech Connect

    Kalcevic, V.; McGahan, J.F.

    1988-06-14

    A process for treating spent catalyst from chlorofluorocarbon production is described wherein the catalyst includes antimony halides and undergoes hydrolysis in an aqueous medium to produce insoluble antimony compounds and fluoride ions. The process comprises hydrolyzing the catalyst in an aqueous solution of ferric chloride having a sufficient concentration of ferric ions to complex substantially all of the fluoride ions produced upon hydrolysis of the catalyst, neutralizing the reaction mass present following hydrolysis of the catalyst and complexing of the fluoride ions by contacting the reaction mass with an aqueous suspension of a compound selected from the class consisting of calcium hydroxide and magnesium hydroxide, and separating the insoluble antimony compounds from the neutralized reaction mass.

  13. Mast cells inhibit intramacrophage Francisella tularensis replication via contact and secreted products including IL-4

    PubMed Central

    Ketavarapu, Jyothi M.; Rodriguez, Annette R.; Yu, Jieh-Juen; Cong, Yu; Murthy, Ashlesh K.; Forsthuber, Thomas G.; Guentzel, M. Neal; Klose, Karl E.; Berton, Michael T.; Arulanandam, Bernard P.

    2008-01-01

    Francisella tularensis is an intracellular, Gram-negative bacterium that is the causative agent of pulmonary tularemia. The pathogenesis and mechanisms related to innate resistance against F. tularensis are not completely understood. Mast cells are strategically positioned within mucosal tissues, the major interface with the external environment, to initiate innate responses at the site of infection. Mast cell numbers in the cervical lymph nodes and the lungs progressively increased as early as 48 h after intranasal F. tularensis live vaccine strain (LVS) challenge. We established a primary bone marrow-derived mast cell–macrophage coculture system and found that mast cells significantly inhibit F. tularensis LVS uptake and growth within macrophages. Importantly, mice deficient in either mast cells or IL-4 receptor displayed greater susceptibility to the infection when compared with corresponding wild-type animals. Contact-dependent events and secreted products including IL-4 from mast cells, and IL-4 production from other cellular sources, appear to mediate the observed protective effects. These results demonstrate a previously unrecognized role for mast cells and IL-4 and provide a new dimension to our understanding of the innate immune mechanisms involved in controlling intramacrophage Francisella replication. PMID:18591675

  14. Sea spray production by bag breakup mode of fragmentation of the air-water interface at strong and hurricane wind

    NASA Astrophysics Data System (ADS)

    Troitskaya, Yuliya; Kandaurov, Alexander; Ermakova, Olga; Kozlov, Dmitry; Sergeev, Daniil; Zilitinkevich, Sergej

    2016-04-01

    Sea sprays is a typical element of the marine atmospheric boundary layer (MABL) of large importance for marine meteorology, atmospheric chemistry and climate studies. They are considered as a crucial factor in the development of hurricanes and severe extratropical storms, since they can significantly enhance exchange of mass, heat and momentum between the ocean and the atmosphere. This exchange is directly provided by spume droplets with the sizes from 10 microns to a few millimeters mechanically torn off the crests of a breaking waves and fall down to the ocean due to gravity. The fluxes associated with the spray are determined by the rate of droplet production at the surface quantified by the sea spray generation function (SSGF), defined as the number of spray particles of radius r produced from the unit area of water surface in unit time. However, the mechanism of spume droplets' formation is unknown and empirical estimates of SSGF varied over six orders of magnitude; therefore, the production rate of large sea spray droplets is not adequately described and there are significant uncertainties in estimations of exchange processes in hurricanes. Experimental core of our work comprise laboratory experiments employing high-speed video-filming, which have made it possible to disclose how water surface looks like at extremely strong winds and how exactly droplets are torn off wave crests. We classified events responsible for spume droplet, including bursting of submerged bubbles, generation and breakup of "projections" or liquid filaments (Koa, 1981) and "bag breakup", namely, inflating and consequent blowing of short-lived, sail-like pieces of the water-surface film, "bags". The process is similar to "bag-breakup" mode of fragmentation of liquid droplets and jets in gaseous flows. Basing on statistical analysis of results of these experiments we show that the main mechanism of spray-generation is attributed to "bag-breakup mechanism On the base of general principles

  15. Hadron production in e/sup +/e/sup -/ annihilation at PEP

    SciTech Connect

    Hofmann, W.

    1984-05-01

    Recent results from PEP on quark and gluon fragmentation are reviewed. Topics include: inclusive stable particle production and resonance production, particle distributions in jets, heavy quark fragmentation, flavor correlation studies and tests of fragmentation models. 37 references.

  16. Our Fragile, Fragmented Physician Workforce: How to Keep Today's Physicians Engaged and Productive.

    PubMed

    Mosley, Kurt; Miller, Phillip

    2015-01-01

    Due to a variety of impingements on their clinical decision-making and overall practice autonomy, many physicians are expressing frustration with the current medical practice environment and are disengaging from patient care roles as a result. In this article, we trace the causes of physician dissatisfaction and the ways in which physicians are seeking alternative practice styles. We then outline steps medical practices can take to keep physicians engaged in patient care and productive in their practices. PMID:26665476

  17. UNUSUAL WATER PRODUCTION ACTIVITY OF COMET C/2012 S1 (ISON): OUTBURSTS AND CONTINUOUS FRAGMENTATION

    SciTech Connect

    Combi, M. R.; Fougere, N.; Mäkinen, J. T. T.; Bertaux, J.-L.; Quémerais, E.

    2014-06-10

    The Solar Wind ANisotropies (SWAN) all-sky hydrogen Lyα camera on the SOlar and Heliospheric Observer (SOHO) satellite observed the hydrogen coma of comet C/2012 S1 (ISON) for most of the last month of its activity from 2013 October 24 to November 24, ending just 4 days before perihelion and its final disruption. The water production rate of the comet was determined from these observations. SOHO has been operating in a halo orbit around the Earth-Sun L1 Lagrange point since its launch in late 1995. Most water vapor produced by comets is ultimately photodissociated into two H atoms and one O atom producing a huge hydrogen coma that is routinely observed in the daily SWAN images in comets of sufficient brightness. Water production rates were calculated from 22 images over most of the last month of the pre-perihelion apparition. The water production rate increased very slowly on average from October 24.9 until November 12.9, staying between 1.8 and 3.4 × 10{sup 28} s{sup –1}, after which it increased dramatically, reaching 1.6 to 2 × 10{sup 30} s{sup –1} from November 21.6 to 23.6. It was not detected after perihelion on December 3.7 when it should have been visible. We examine the active surface area necessary to explain the water production rate and its variation and are able to place constraints on the physical size of the original nucleus necessary to account for the large amount of activity from November 12.9 and until just before perihelion.

  18. Precision study of ZZγ production including Z-boson leptonic decays at the ILC

    NASA Astrophysics Data System (ADS)

    Zhang, Yu; Duan, Peng-Fei; Ma, Wen-Gan; Zhang, Ren-You; Chen, Chong

    2016-02-01

    We report on the precision predictions for the e^+e^- → Z Zγ ~process including Z-boson leptonic decays at the ILC in the standard model (SM). The calculation includes the full next-to-leading (NLO) electroweak (EW) corrections and high order initial state radiation (h.o. ISR) contributions. We find that the NLO EW corrections heavily suppress the LO cross section, and the h.o. ISR effects are notable near the threshold while become small in high energy region. We present the LO and the NLO EW+h.o. ISR corrected distributions of the transverse momenta of final Z-boson and photon as well as the Z-pair invariant mass, and we investigate the corresponding NLO EW and h.o. ISR relative corrections. We also study the leptonic decays of the final Z-boson pair by adopting the MadSpin method where the spin correlation effect is involved. We conclude that both the h.o. ISR effects and the NLO EW corrections are important in exploring the ZZγ production at the ILC.

  19. Women convicted of a sexual offence, including child pornography production: two case reports.

    PubMed

    Prat, S; Bertsch, I; Chudzik, L; Réveillère, Ch

    2014-03-01

    All available studies addressing the clinical and legal aspects of child pornography have systematically concerned male abusers. The social lens through which women are viewed tends to play down their responsibility in the sexual abuse of children. Unlike men, women rarely abuse children outside the close or family circle. Furthermore, they have frequently been abused themselves in their childhood. To our knowledge, no cases of women charged with sex-related offences, including child pornography, have been described in the literature. The psychopathological characteristics of female sexual abusers and of the two women in our cases tend to suggest that the deliberate downloading of child pornography images by women is unusual, as their deviant behaviour is not related to paedophile sexual arousal It is hypothesized that the act enables women perpetrators to satisfy the sexual urges of their spouse. Sexual abuse by women exists, but the nature of the abuse appears to be specific to the gender of the perpetrator. We present two cases of women charged with sexual offences concerning minors, including the production of child pornography material. PMID:24661700

  20. Role of angular momentum in the production of complex fragments in fusion and quasifission reactions

    SciTech Connect

    Kalandarov, Sh. A.; Adamian, G. G.; Antonenko, N. V.; Scheid, W.

    2011-05-15

    The influence of angular momentum on the competition between complete fusion followed by the decay of compound nucleus and quasifission channels is treated within the dinuclear system model. The charge distributions of the products in the reactions {sup 28}Si+{sup 96}Zr, {sup 4}He+{sup 130}Te, and {sup 40}Ca+{sup 82}Kr are predicted at bombarding energies above the Coulomb barrier. The results of calculations for the reactions {sup 93}Nb+{sup 9}Be,{sup 12}C,{sup 27}Al; {sup 84}Kr+{sup 27}Al; {sup 86}Kr+{sup 63}Cu; {sup 139}La+{sup 12}C,{sup 27}Al; and {sup 45}Sc+{sup 65}Cu are compared with the available experimental data.

  1. Assembly of highly standardized gene fragments for high-level production of porphyrins in E. coli.

    PubMed

    Nielsen, Morten T; Madsen, Karina M; Seppälä, Susanna; Christensen, Ulla; Riisberg, Lone; Harrison, Scott J; Møller, Birger Lindberg; Nørholm, Morten H H

    2015-03-20

    Standardization of molecular cloning greatly facilitates advanced DNA engineering, parts sharing, and collaborative efforts such as the iGEM competition. All of these attributes facilitate exploitation of the wealth of genetic information made available by genome and RNA sequencing. Standardization also comes at the cost of reduced flexibility. We addressed this paradox by formulating a set of design principles aimed at maximizing standardization while maintaining high flexibility in choice of cloning technique and minimizing the impact of standard sequences. The design principles were applied to formulate a molecular cloning pipeline and iteratively assemble and optimize a six-gene pathway for protoporphyrin IX synthesis in Escherichia coli. State of the art production levels were achieved through two simple cycles of engineering and screening. The principles defined here are generally applicable and simplifies the experimental design of projects aimed at biosynthetic pathway construction or engineering. PMID:24905856

  2. Overexpression of ryanodine receptor type 1 enhances mitochondrial fragmentation and Ca2+-induced ATP production in cardiac H9c2 myoblasts

    PubMed Central

    O-Uchi, Jin; Jhun, Bong Sook; Hurst, Stephen; Bisetto, Sara; Gross, Polina; Chen, Ming; Kettlewell, Sarah; Park, Jongsun; Oyamada, Hideto; Smith, Godfrey L.; Murayama, Takashi

    2013-01-01

    Ca+ influx to mitochondria is an important trigger for both mitochondrial dynamics and ATP generation in various cell types, including cardiac cells. Mitochondrial Ca2+ influx is mainly mediated by the mitochondrial Ca2+ uniporter (MCU). Growing evidence also indicates that mitochondrial Ca2+ influx mechanisms are regulated not solely by MCU but also by multiple channels/transporters. We have previously reported that skeletal muscle-type ryanodine receptor (RyR) type 1 (RyR1), which expressed at the mitochondrial inner membrane, serves as an additional Ca2+ uptake pathway in cardiomyocytes. However, it is still unclear which mitochondrial Ca2+ influx mechanism is the dominant regulator of mitochondrial morphology/dynamics and energetics in cardiomyocytes. To investigate the role of mitochondrial RyR1 in the regulation of mitochondrial morphology/function in cardiac cells, RyR1 was transiently or stably overexpressed in cardiac H9c2 myoblasts. We found that overexpressed RyR1 was partially localized in mitochondria as observed using both immunoblots of mitochondrial fractionation and confocal microscopy, whereas RyR2, the main RyR isoform in the cardiac sarcoplasmic reticulum, did not show any expression at mitochondria. Interestingly, overexpression of RyR1 but not MCU or RyR2 resulted in mitochondrial fragmentation. These fragmented mitochondria showed bigger and sustained mitochondrial Ca2+ transients compared with basal tubular mitochondria. In addition, RyR1-overexpressing cells had a higher mitochondrial ATP concentration under basal conditions and showed more ATP production in response to cytosolic Ca2+ elevation compared with nontransfected cells as observed by a matrix-targeted ATP biosensor. These results indicate that RyR1 possesses a mitochondrial targeting/retention signal and modulates mitochondrial morphology and Ca2+-induced ATP production in cardiac H9c2 myoblasts. PMID:24124188

  3. Entropy Production of Entirely Diffusional Laplacian Transfer and the Possible Role of Fragmentation of the Boundaries

    NASA Astrophysics Data System (ADS)

    Karamanos, K.; Mistakidis, S. I.; Massart, T. J.; Mistakidis, I. S.

    2015-06-01

    The entropy production and the variational functional of a Laplacian diffusional field around the first four fractal iterations of a linear self-similar tree (von Koch curve) is studied analytically and detailed predictions are stated. In a next stage, these predictions are confronted with results from numerical resolution of the Laplace equation by means of Finite Elements computations. After a brief review of the existing results, the range of distances near the geometric irregularity, the so-called "Near Field", a situation never studied in the past, is treated exhaustively. We notice here that in the Near Field, the usual notion of the active zone approximation introduced by Sapoval et al. [M. Filoche and B. Sapoval, Transfer across random versus deterministic fractal interfaces, Phys. Rev. Lett. 84(25) (2000) 5776;1 B. Sapoval, M. Filoche, K. Karamanos and R. Brizzi, Can one hear the shape of an electrode? I. Numerical study of the active zone in Laplacian transfer, Eur. Phys. J. B. Condens. Matter Complex Syst. 9(4) (1999) 739-753.]2 is strictly inapplicable. The basic new result is that the validity of the active-zone approximation based on irreversible thermodynamics is confirmed in this limit, and this implies a new interpretation of this notion for Laplacian diffusional fields.

  4. Improved ethanol production from biomass by a rumen metagenomic DNA fragment expressed in Escherichia coli MS04 during fermentation.

    PubMed

    Loaces, Inés; Amarelle, Vanesa; Muñoz-Gutierrez, Iván; Fabiano, Elena; Martinez, Alfredo; Noya, Francisco

    2015-11-01

    With the aim of improving current ethanologenic Escherichia coli strains, we screened a metagenomic library from bovine ruminal fluid for cellulolytic enzymes. We isolated one fosmid, termed Csd4, which was able to confer to E. coli the ability to grow on complex cellulosic material as the sole carbon source such as avicel, carboxymethyl cellulose, filter paper, pretreated sugarcane bagasse, and xylan. Glucanolytic activity obtained from E. coli transformed with Csd4 was maximal at 24 h of incubation and was inhibited when glucose or xylose were present in the media. The 34,406-bp DNA fragment of Csd4 was completely sequenced, and a putative endoglucanase, a xylosidase/arabinosidase, and a laccase gene were identified. Comparison analysis revealed that Csd4 derived from an organism closely related to Prevotella ruminicola, but no homologies were found with any of the genomes already sequenced. Csd4 was introduced into the ethanologenic E. coli MS04 strain and ethanol production from CMC, avicel, sugarcane bagasse, or filter paper was observed. Exogenously expressed β-glucosidase had a positie effect on cell growth in agreement with the fact that no putative β-glucosidase was found in Csd4. Ethanol production from sugarcane bagasse was improved threefold by Csd4 after saccharification by commercial Trichoderma reesei cellulases underlining the ability of Csd4 to act as a saccharification enhancer to reduce the enzymatic load and time required for cellulose deconstruction. PMID:26175105

  5. Estimate of fine root production including the impact of decomposed roots in a Bornean tropical rainforest

    NASA Astrophysics Data System (ADS)

    Katayama, Ayumi; Khoon Koh, Lip; Kume, Tomonori; Makita, Naoki; Matsumoto, Kazuho; Ohashi, Mizue

    2016-04-01

    Considerable carbon is allocated belowground and used for respiration and production of roots. It is reported that approximately 40 % of GPP is allocated belowground in a Bornean tropical rainforest, which is much higher than those in Neotropical rainforests. This may be caused by high root production in this forest. Ingrowth core is a popular method for estimating fine root production, but recent study by Osawa et al. (2012) showed potential underestimates of this method because of the lack of consideration of the impact of decomposed roots. It is important to estimate fine root production with consideration for the decomposed roots, especially in tropics where decomposition rate is higher than other regions. Therefore, objective of this study is to estimate fine root production with consideration of decomposed roots using ingrowth cores and root litter-bag in the tropical rainforest. The study was conducted in Lambir Hills National Park in Borneo. Ingrowth cores and litter bags for fine roots were buried in March 2013. Eighteen ingrowth cores and 27 litter bags were collected in May, September 2013, March 2014 and March 2015, respectively. Fine root production was comparable to aboveground biomass increment and litterfall amount, and accounted only 10% of GPP in this study site, suggesting most of the carbon allocated to belowground might be used for other purposes. Fine root production was comparable to those in Neotropics. Decomposed roots accounted for 18% of fine root production. This result suggests that no consideration of decomposed fine roots may cause underestimate of fine root production.

  6. Fragmentation Pathways in the Uracil Radical Cation

    SciTech Connect

    Zhou, Congyi; Matsika, Spiridoula; Kotur, Marija; Weinacht, Thomas C.

    2012-08-24

    We investigate pathways for fragmentation in the uracil radical cation using ab initio electronic structure calculations. We focus on the main fragments produced in pump–probe dissociative ionization experiments. These are fragments with mass to charge ratios (m/z) of 69, 28, 41, and 42. Barriers to dissociation along the ground ionic surface are reported, which provide an estimate of the energetic requirements for the production of the main fragments. Finally, direct and sequential fragmentation mechanisms have been analyzed, and it is concluded that sequential fragmentation after production of fragment with m/z 69 is the dominant mechanism for the production of the smaller fragments.

  7. Crop rotations that include legumes and reduced tillage improve the energy efficiency of crop production systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Modern crop production requires large inputs of energy and these inputs represent a substantial cost. Management practices such as crop rotation and choice of tillage practice influence the energy balance for a production system. Legumes support bacteria that are capable of fixing nitrogen (N). This...

  8. Crop rotations that include legumes and reduced tillage improve the energy efficiency of crop production systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Text: Modern crop production requires large inputs of energy and these inputs represent a substantial cost. Management practices such as crop rotation and choice of tillage practice influence the energy balance for a production system. Legumes support bacteria that are capable of fixing nitrogen (N)...

  9. Including indoor offgassed emissions in the life cycle inventories of wood products.

    PubMed

    Chaudhary, Abhishek; Hellweg, Stefanie

    2014-12-16

    Volatile organic compounds (VOCs) that negatively affect human health are emitted from wood products used indoors. However, the existing life cycle inventories of these products only document the emissions occurring during production and disposal phases. Consequently, the life cycle assessment (LCA) of indoor wooden products conducted using these inventories neglect the use-phase impacts from exposure to offgassed VOCs and therefore underestimate the product's total environmental impact. This study demonstrates a methodology to calculate the use phase inventory and the corresponding human health impacts resulting from indoor use of any VOC emitting product. For the five most commonly used types of boards used in indoor wood products, the mass of each VOC emitted into the indoor compartment over their service life was calculated by statistically analyzing data from 50 published chamber testing studies. Uncertainty was assessed using Monte Carlo simulations. The calculated inventory data were used in a case study to calculate and compare the health impacts of five different wooden floorings made of above materials. The results show that the use-phase human-toxicity impacts are an order of magnitude higher than those occurring during the rest of the flooring's life cycle. The factors influencing the offgassing of VOCs from wood products and measures to reduce exposure are discussed. PMID:25405704

  10. Progress towards the production of the 236gNp standard sources and competing fission fragment production

    NASA Astrophysics Data System (ADS)

    Larijani, C.; Pickford, O. L.; Collins, S. M.; Ivanov, P.; Jerome, S. M.; Keightley, J. D.; Pearce, A. K.; Regan, P. H.

    2015-11-01

    The isobaric distribution of fission residues produced following the bombardment of a natural uranium target with a beam of 25 MeV protons has been evaluated. Decay analysis of thirteen isobarically distinct fission residues were carried out using high-resolution γ-spectrometry at the UK National Physical Laboratory. Stoichiometric abundances were calculated via the determination of absolute activity concentrations associated with the longest-lived members of each isobaric chain. This technique was validated by computational modelling of likely sequential decay processes through an isobaric decay chain. The results were largely in agreement with previously published values for neutron bombardments on 238U at energies of 14 MeV. Higher yields of products with mass numbers A~110-130 were found, consistent with the increasing yield of these radionuclides as the bombarding energy is increased.

  11. 75 FR 20390 - Senco Brands, Inc., fka Senco Products, Inc., Including the On-Site Leased Workers of Manpower...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-19

    ... published in the Federal Register on January 25, 2010 (75 FR 3930). At the request of the State Agency, the... Employment and Training Administration Senco Brands, Inc., fka Senco Products, Inc., Including the On- Site... December 10, 2009, applicable to workers of Senco Brands, Inc., fka Senco Products, Inc., including the...

  12. Diffractive heavy flavor production-including W/sup +-/ and Z/sup 0/

    SciTech Connect

    White, A.R.

    1986-01-01

    It is shown that when the Pomeron has the semiperturbative origin in QCD, diffractive heavy quark production is independent from, and not suppressed relative to, the perturbative gluon fusion process. It is emphasized that anomalously large diffractive heavy flavor cross-sections could anticipate correspondingly large cross-sections for the diffractive production of W/sup +-/ and Z/sup 0/-providing distinctive evidence for the dynamical nature of the electroweak Higgs sector.

  13. Nanoaerosols Including Radon Decay Products in Outdoor and Indoor Air at a Suburban Site

    PubMed Central

    Smerajec, Mateja; Vaupotič, Janja

    2012-01-01

    Nanoaerosols have been monitored inside a kitchen and in the courtyard of a suburban farmhouse. Total number concentration and number size distribution (5–1000 nm) of general aerosol particles, as measured with a Grimm Aerosol SMPS+C 5.400 instrument outdoors, were mainly influenced by solar radiation and use of farming equipment, while, indoors, they were drastically changed by human activity in the kitchen. In contrast, activity concentrations of the short-lived radon decay products 218Po, 214Pb, and 214Bi, both those attached to aerosol particles and those not attached, measured with a Sarad EQF3020-2 device, did not appear to be dependent on these activities, except on opening and closing of the kitchen window. Neither did a large increase in concentration of aerosol particles smaller than 10 or 20 nm, with which the unattached radon products are associated, augment the fraction of the unattached decay products significantly. PMID:22523488

  14. Higgs boson production via gluon fusion: Soft-gluon resummation including mass effects

    NASA Astrophysics Data System (ADS)

    Schmidt, Timo; Spira, Michael

    2016-01-01

    We analyze soft and collinear gluon resummation effects at the N3LL level for Standard Model Higgs boson production via gluon fusion g g →H and the neutral scalar and pseudoscalar Higgs bosons of the minimal supersymmetric extension at the next-to-next-to-next-to-leading-log (N3LL ) and next-to-next-to-leading-log (NNLL) level, respectively. We introduce refinements in the treatment of quark mass effects and subleading collinear gluon effects within the resummation. Soft and collinear gluon resummation effects amount to up to about 5% beyond the fixed-order results for scalar and pseudoscalar Higgs boson production.

  15. Production of a recombinant anti-human CD4 single-chain variable-fragment antibody using phage display technology and its expression in Escherichia coli.

    PubMed

    Babaei, Arash; Zarkesh-Esfahani, Sayyed Hamid; Gharagozloo, Marjan

    2011-05-01

    Single-chain variable fragment (scFv) is a fusion protein of the variable regions of the heavy (VH) and light (VL) chains of immunoglobulin, connected with a short linker peptide of 10 to about 20 amino acids. In this study, the scFv of a monoclonal antibody against the third domain of human CD4 was cloned from OKT4 hybridoma cells using the phage display technique and produced in E. coli. The expression, production, and purification of anti-CD4 scFv were tested using SDS-PAGE and Western blot, and the specificity of anti-CD4 scFv was examined using ELISA. A 31 kDa recombinant anti-CD4 scFv was expressed and produced in bacteria, which was confirmed by SDS-PAGE and Western blot assays. Sequence analysis proved the ScFv structure of the construct. It was able to bind to CD4 in quality ELISA assay. The canonical structure of anti-CD4 scFv antibody was obtained using the SWISS_MODEL bioinformatics tool for comparing with the scFv general structure. To the best of our knowledge, this is the first report for generating scFv against human CD4 antigen. Engineered anti-CD4 scFv could be used in immunological studies, including fluorochrome conjugation, bispecific antibody production, bifunctional protein synthesis, and other genetic engineering manipulations. Since the binding site of our product is domain 3 (D3) of the CD4 molecule and different from the CD4 immunological main domain, including D1 and D2, further studies are needed to evaluate the anti-CD4 scFv potential for diagnostic and therapeutic applications. PMID:21617352

  16. State-selective enhanced production of positive ions and excited neutral fragments of gaseous CH2Cl2 following Cl 2p core-level photoexcitation

    NASA Astrophysics Data System (ADS)

    Lu, K. T.; Chen, J. M.; Lee, J. M.; Haw, S. C.; Chen, S. A.; Liang, Y. C.; Chen, S. W.

    2010-09-01

    Following photoexcitation of Cl2p electrons to various resonances, the dissociation dynamics of ionic and excited neutral fragments of gaseous CH2Cl2 was investigated by combined measurements of photon-induced ionic dissociation, x-ray absorption, and uv-visible dispersed fluorescence. The Cl2p core-to-Rydberg excitations near the ionization threshold produce a notable enhancement of excited neutral fragments (C* and CH*), which is attributed to the contribution from a shake-modified resonant Auger decay and postcollision interaction. The excitation Cl2p→10a1* induces an enhanced yield of CH2+, possibly originating from fast dissociation via a strongly repulsive surface. The experimental results provide insight into the dissociation dynamics of ionic and excited neutral fragment production following core-level excitation.

  17. Fragmentation reactions using electrospray ionization mass spectrometry: an important tool for the structural elucidation and characterization of synthetic and natural products.

    PubMed

    Demarque, Daniel P; Crotti, Antonio E M; Vessecchi, Ricardo; Lopes, João L C; Lopes, Norberto P

    2016-03-01

    Over the last decade, the number of studies reporting the use of electrospray ionization mass spectrometry (ESI-MS) in combination with collision cells (or other activation methods) to promote fragmentation of synthetic and natural products for structural elucidation purposes has considerably increased. However, the lack of a systematic compilation of the gas-phase fragmentation reactions subjected to ESI-MS/MS conditions still represents a challenge and has led to many misunderstood results in the literature. This review article exploits the most common fragmentation reactions for ions generated by ESI in positive and negative modes using collision cells in an effort to stimulate the use of this technique by non-specialists, undergraduate students and researchers in related areas. PMID:26673733

  18. 77 FR 42764 - Certain Integrated Circuits, Chipsets, & Products Containing Same Including Televisions; Notice...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-20

    ...Notice is hereby given that the presiding administrative law judge has issued a Final Initial Determination and Recommended Determination on Remedy and Bonding in the above-captioned investigation. The Commission is soliciting comments on public interest issues raised by the recommended relief, specifically a limited exclusion order against certain integrated circuits, chipsets, and products......

  19. 76 FR 5832 - Electrolux Home Products, Inc., Electrolux Major Appliances Division, Including On-Site Leased...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-02-02

    ... Federal Register on August 19, 2009 (74 FR 41935). The workers produce laundry equipment. At the request... Employment and Training Administration Electrolux Home Products, Inc., Electrolux Major Appliances Division... to Apply for Worker Adjustment Assistance on June 25, 2009, applicable to workers of Electrolux...

  20. VOLATILE HALOCARBON PRODUCTION FROM THE CHLORINATION OF MARINE ALGAL BYPRODUCTS, INCLUDING D-MANNITOL

    EPA Science Inventory

    The ability of various exudates of marine algae to produce chloroform during solution chlorination was investigated. D-Mannitol generated amounts that increased markedly with increase in pH, whereas glycerol under similar conditions yielded little product. L-Proline exerted an in...

  1. Concentrations and composition profiles of parabens in currency bills and paper products including sanitary wipes.

    PubMed

    Liao, Chunyang; Kannan, Kurunthachalam

    2014-03-15

    Parabens (alkyl esters of p-hydroxybenzoic acid) are widely used as antimicrobial preservatives in personal care products, pharmaceuticals, and foodstuffs. Although parabens have been reported to be used as antimicrobials in certain types of papers (e.g., wet sanitary or hygiene wipes), little is known about the occurrence of these compounds in paper products. In this study, we determined the concentrations of six paraben analogs, methyl (MeP), ethyl (EtP), propyl (PrP), butyl (BuP), benzyl (BzP), and heptyl parabens (HepP), in 253 paper products divided into 18 categories, using liquid chromatography-tandem mass spectrometry (LC-MS/MS). At least one of the six parabens was detected in almost all (detection rate: 98%) paper samples, and the total concentrations (∑PBs; sum of six parabens) ranged from 1.85 to 3,220,000 ng/g (geometric mean (GM): 103; median: 55.1 ng/g). Sanitary wipes contained very high concentrations of ∑PBs (GM: 8300 ng/g). Paper currencies, tickets, business cards, food cartons, flyers, and newspapers contained notable concentrations of ∑PBs, and the GM concentrations in these paper categories were on the order of a few tens to thousands of nanograms per gram. One source of parabens in paper products is the use of these chemicals as antifungal agents. MeP and PrP were the predominant analogs, accounting for approximately 62% and 16% of the total concentrations of parabens, respectively. On the basis of measured concentrations and frequency of handling of paper products, we estimated the daily intake (EDI) of parabens through dermal absorption. The GM and 95th percentile EDI values were 6.31 and 2050 ng/day, respectively, for the general population. Among the paper categories analyzed, sanitary wipes contributed to the majority (>90%) of the exposures. PMID:24419282

  2. Feasibility of Including Green Tea Products for an Analytically Verified Dietary Supplement Database

    PubMed Central

    Saldanha, Leila; Dwyer, Johanna; Andrews, Karen; Betz, Joseph; Harnely, James; Pehrsson, Pamela; Rimmer, Catherine; Savarala, Sushma

    2015-01-01

    The Dietary Supplement Ingredient Database (DSID) is a federally funded, publicly accessible dietary supplement database that currently contains analytically-derived information on micronutrients in selected adult and children’s multivitamin and mineral (MVM) supplements. Other constituents in dietary supplement products such as botanicals are also of interest and thus are being considered for inclusion in the DSID. Thirty-eight constituents, mainly botanicals were identified and prioritized by a federal interagency committee. Green tea was selected from this list as the botanical for expansion of the DSID. This paper describes the process for prioritizing dietary ingredients in the DSID. It also discusses the criteria for inclusion of these ingredients, and the approach for selecting and testing products for the green tea pilot study. PMID:25817236

  3. Bioremediation treatability studies for soils containing herbicides, chemicals, and petroleum products. (Includes technical summary). Final report

    SciTech Connect

    Nies, L.; Mesarch, M.

    1996-09-16

    Leaking underground storage tanks (LUST`s) are widespread throughout the United States. Soil contamination by hazardous pollutants may exist at some Indiana Department of Transportation (INDOT) facilities. Potential pollutants are petroleum products, herbicides and solvents. The primary hazard posed by LUST`s is the possible contamination of ground water, which comprises most of our drinking water supply. The overall objective of this study was to determine whether bioremediation is a feasible treatment option for contaminated INDOT soils.

  4. Atmospheric Radiation Measurement (ARM) Value-Added Data Products (Including Evaluated Data Sets)

    DOE Data Explorer

    Many of the scientific needs of the ARM Program are met through the analysis and processing of existing data products into "value-added" products or VAPs. Despite extensive instrumentation deployed at the ARM sites, there will always be quantities of interest that are either impractical or impossible to measure directly or routinely. Physical models using ARM instrument data as inputs are implemented as VAPs and can help fill some of the unmet measurement needs of the Program. Conversely, ARM produces some VAPs not in order to fill unmet measurement needs, but instead to improve the quality of existing measurements. In addition, when more than one measurement is available, ARM also produces "best estimate" VAPs. A special class of VAP called a Quality Measurement Experiment (QME) adds value to the input data streams by providing for continuous assessment of the quality of the input data. [taken from http://www.arm.gov/data/vaps_all.php] One of the ARM data centers, the External Data Center or XDC at Brookhaven National Laboratory, also adds value to ARM information by identifying sources and acquiring external data to augment the data being generated within the program. These external data sets are converted, processed, and carefully evaluated for their value to the overall ARM program. /. Data Plots are also value-added products from ARM.

  5. Production of new neutron-rich isotopes of heavy elements in fragmentation reactions of {sup 238}U projectiles at 1A GeV

    SciTech Connect

    Alvarez-Pol, H.; Benlliure, J.; Casarejos, E.; Cortina-Gil, D.; Fernandez-Dominguez, B.; Pereira, J.; Audouin, L.; Enqvist, T.; Schmidt, K.-H.; Yordanov, O.; Junghans, A. R.; Jurado, B.; Rejmund, F.

    2010-10-15

    The production of heavy neutron-rich nuclei has been investigated using cold-fragmentation reactions of {sup 238}U projectiles at relativistic energies. The experiment performed at the high-resolving-power magnetic spectrometer Fragment Separator at GSI made it possible to identify 40 new heavy neutron-rich nuclei: {sup 205}Pt, {sup 207-210}Au, {sup 211-216}Hg, {sup 214-217}Tl, {sup 215-220}Pb, {sup 219-224}Bi, {sup 223-227}Po, {sup 225-229}At, {sup 230,231}Rn, and {sup 233}Fr. The production cross sections of these nuclei were also determined and used to benchmark reaction codes that predict the production of nuclei far from stability.

  6. Production and quantification of sesquiterpenes in Saccharomyces cerevisiae, including extraction, detection and quantification of terpene products and key related metabolites.

    PubMed

    Rodriguez, Sarah; Kirby, James; Denby, Charles M; Keasling, Jay D

    2014-08-01

    The procedures described here are designed for engineering Saccharomyces cerevisiae to produce sesquiterpenes with an aim to either increase product titers or to simply generate a quantity of product sufficient for identification and/or downstream experimentation. Engineering high-level sesquiterpene production in S. cerevisiae often requires iterations of strain modifications and metabolite analysis. To address the latter, the methods described here were tailored for robust measurement of metabolites that we have found to be fundamental indicators of pathway flux, using only gas chromatography and mass spectrometry (GC-MS) instrumentation. Thus, by focusing on heterologous production of sesquiterpenes via the mevalonate (MEV) pathway in S. cerevisiae, we detail procedures for extraction and detection of the key pathway metabolites MEV, squalene and ergosterol, as well as the farnesyl pyrophosphate (FPP)-derived side products farnesol and nerolidol. Analysis of these compounds is important for quality control, because they are possible indicators of pathway imbalance. As many of the sesquiterpene synthase (STS) genes encountered in nature are of plant origin and often not optimal for expression in yeast, we provide guidelines for designing gene expression cassettes to enable expression in S. cerevisiae. As a case study for these protocols, we have selected the sesquiterpene amorphadiene, native to Artemisia annua and related plants. The analytical steps can be completed within 1-2 working days, and a typical experiment might take 1 week. PMID:25058645

  7. Irreversibility and entropy production in transport phenomena, III—Principle of minimum integrated entropy production including nonlinear responses

    NASA Astrophysics Data System (ADS)

    Suzuki, Masuo

    2013-01-01

    A new variational principle of steady states is found by introducing an integrated type of energy dissipation (or entropy production) instead of instantaneous energy dissipation. This new principle is valid both in linear and nonlinear transport phenomena. Prigogine’s dream has now been realized by this new general principle of minimum “integrated” entropy production (or energy dissipation). This new principle does not contradict with the Onsager-Prigogine principle of minimum instantaneous entropy production in the linear regime, but it is conceptually different from the latter which does not hold in the nonlinear regime. Applications of this theory to electric conduction, heat conduction, particle diffusion and chemical reactions are presented. The irreversibility (or positive entropy production) and long time tail problem in Kubo’s formula are also discussed in the Introduction and last section. This constitutes the complementary explanation of our theory of entropy production given in the previous papers (M. Suzuki, Physica A 390 (2011) 1904 and M. Suzuki, Physica A 391 (2012) 1074) and has given the motivation of the present investigation of variational principle.

  8. Comparison of the serum fibrin-fibrinogen degradation products with cytokeratin 19 fragment as biomarkers in patients with lung cancer.

    PubMed

    So, Hee Jin; Hong, Seok-Il; Lee, Jin Kyung; Chang, Yoon Hwan; Kang, Sun Jung; Hong, Young Jun

    2014-09-01

    Lung cancer is one of the main causes of cancer-related mortality. The identification of early diagnostic biomarkers improved outcomes for lung cancer patients. Serum fibrin-fibrinogen degradation products (FDP) levels are elevated in numerous malignancies due to hemostatic alterations. The serum FDP levels were compared to the levels of cytokeratin 19 fragment antigen (CYFRA 21-1), another well-established biomarker. The serum samples from 193 lung cancer patients, 84 healthy controls and 106 patients with benign respiratory diseases were obtained. The serum FDP level was measured using the DR-70 immunoassay and the CYFRA 21-1 level was measured by electrochemiluminescence using the Roche Analytics E170. Receiver operating characteristics curves were used to assess the predictive sensitivity and specificity. The mean serum FDP level in lung cancer patients (35.01±229.02 μg/ml) was significantly higher compared to the 190 non-cancerous subjects (0.60±0.75 μg/ml; P=0.039). The mean serum CYFRA 21-1 level in lung cancer patients (4.50±6.67 ng/ml) was also significantly higher compared to the non-cancerous subjects (1.40±0.83 ng/ml; P<0.05). FDP exhibited clinical sensitivity and specificity of 86 and 75%, respectively, at an optimal cut-off at 0.67 μg/ml. CYFRA 21-1 exhibited clinical sensitivity and specificity of 77 and 74%, respectively, at a cut-off of 1.65 ng/ml. The serum FDP area under the curve (0.87) was slightly higher compared to CYFRA 21-1 (0.83). Therefore, it is apparent that serum FDP is comparable to CYFRA 21-1 as a lung cancer biomarker and can be used for clinical practice. PMID:25054020

  9. 75 FR 453 - FLSMidth, Inc., Cement Division, Product Engineering, Including On-Site Leased Workers of Aerotek...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-05

    ... Employment and Training Administration FLSMidth, Inc., Cement Division, Product Engineering, Including On-Site Leased Workers of Aerotek Contract Engineering, Allied Personnel Services, Eastern Engineering... Engineering, and Clarke Consulting, Inc., Bethlehem, PA; Amended Certification Regarding Eligibility To...

  10. Factory trials to determine how sugarcane trash impacts downstream processing including affinated sugar production

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In many countries including the United States and South Africa, certain areas are changing to green from burnt cane harvesting, due to public and environmental pressures against burning and the current interest in using sugarcane trash as biomass. Since the 1940s there have been world-wide factory ...

  11. Estimated economic benefits during the 'decade of vaccines' include treatment savings, gains in labor productivity.

    PubMed

    Stack, Meghan L; Ozawa, Sachiko; Bishai, David M; Mirelman, Andrew; Tam, Yvonne; Niessen, Louis; Walker, Damian G; Levine, Orin S

    2011-06-01

    In 2010 the Bill & Melinda Gates Foundation announced a $10 billion commitment over the next ten years to increase access to childhood vaccines in the world's poorest countries. The effort was labeled the "Decade of Vaccines." This study estimates both the short- and long-term economic benefits from the introduction and increased use of six vaccines in seventy-two of the world's poorest countries from 2011 to 2020. Increased rates of vaccination against pneumococcal and Haemophilus influenzae type b pneumonia and meningitis, rotavirus, pertussis, measles, and malaria over the next ten years would save 6.4 million lives and avert 426 million cases of illness, $6.2 billion in treatment costs, and $145 billion in productivity losses. Monetary estimates based on this type of analysis can be used to determine the return on investment in immunization from both the international community and local governments, and they should be considered in policy making. PMID:21653952

  12. Characterization of products from hydrothermal carbonization of orange pomace including anaerobic digestibility of process liquor.

    PubMed

    Erdogan, Ezgi; Atila, Buse; Mumme, Jan; Reza, M Toufiq; Toptas, Asli; Elibol, Murat; Yanik, Jale

    2015-11-01

    In this study, the effect of the temperature and reaction time on hydrothermal carbonization (HTC) of orange pomace was investigated. In addition, a set of anaerobic batch tests were performed to determine the resulting biogas and methane potential of the spent liquor. Hydrochar yields followed a decreasing trend with the increasing temperature, whereas reaction time had no considerably effect on the yield. The evolution of the H/C and O/C atomic ratios from the raw material to the hydrochars suggested that dehydration reactions prevail during HTC. The hydrochars tended to become enriched in Ca, Mg and P minerals by increasing HTC temperature. The heavy metal contents in hydrochars were found below limits and no PAH compound was detected. Anaerobic digestion tests showed that the aqueous phase from HTC can be used as feedstocks for biogas production. PMID:26226579

  13. Fragment-based lead design

    NASA Astrophysics Data System (ADS)

    Filz, O. A.; Poroikov, Vladimir V.

    2012-02-01

    State-of-the-art approaches to the fragment-based design of organic compounds with desired properties are considered. The review covers methods, which are used in different steps of the design, such as computational methods for fragment library design, experimental and computational methods for fragment discovery and methods for the generation of structures of organic compounds. Examples are given of drug candidates, which were constructed using the fragment-based approach. The bibliography includes 156 references.

  14. HCD Fragmentation of Glycated Peptides.

    PubMed

    Keilhauer, Eva C; Geyer, Philipp E; Mann, Matthias

    2016-08-01

    Protein glycation is a concentration-dependent nonenzymatic reaction of reducing sugars with amine groups of proteins to form early as well as advanced glycation (end-) products (AGEs). Glycation is a highly disease-relevant modification but is typically only studied on a few blood proteins. To complement our blood proteomics studies in diabetics, we here investigate protein glycation by higher energy collisional dissociation (HCD) fragmentation on Orbitrap mass spectrometers. We established parameters to most efficiently fragment and identify early glycation products on in vitro glycated model proteins. Retaining standard collision energies does not degrade performance if the most dominant neutral loss of H6O3 is included into the database search strategy. Glycation analysis of the entire HeLa proteome revealed an unexpected intracellular preponderance for arginine over lysine modification in early and advanced glycation (end-) products. Single-run analysis from 1 μL of undepleted and unenriched blood plasma identified 101 early glycation sites as well as numerous AGE sites on diverse plasma proteins. We conclude that HCD fragmentation is well-suited for analyzing glycated peptides and that the diabetic status of patients can be directly diagnosed from single-run plasma proteomics measurements. PMID:27425404

  15. The QCRad Value Added Product: Surface Radiation Measurement Quality Control Testing, Including Climatology Configurable Limits

    SciTech Connect

    Long, CN; Shi, Y

    2006-09-01

    This document describes the QCRad methodology, which uses climatological analyses of the surface radiation measurements to define reasonable limits for testing the data for unusual data values. The main assumption is that the majority of the climatological data are “good” data, which for field sites operated with care such as those of the Atmospheric Radiation Measurement (ARM) Program is a reasonable assumption. Data that fall outside the normal range of occurrences are labeled either “indeterminate” (meaning that the measurements are possible, but rarely occurring, and thus the values cannot be identified as good) or “bad” depending on how far outside the normal range the particular data reside. The methodology not only sets fairly standard maximum and minimum value limits, but also compares what we have learned about the behavior of these instruments in the field to other value-added products (VAPs), such as the Diffuse infrared (IR) Loss Correction VAP (Younkin and Long 2004) and the Best Estimate Flux VAP (Shi and Long 2002).

  16. 12 CFR 303.46 - Financial education programs that include the provision of bank products and services.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... principles of personal financial management, banking operations, or the benefits of saving for the future... 12 Banks and Banking 5 2012-01-01 2012-01-01 false Financial education programs that include the... Branches and Offices § 303.46 Financial education programs that include the provision of bank products...

  17. 12 CFR 303.46 - Financial education programs that include the provision of bank products and services.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... principles of personal financial management, banking operations, or the benefits of saving for the future... 12 Banks and Banking 4 2010-01-01 2010-01-01 false Financial education programs that include the... Branches and Offices § 303.46 Financial education programs that include the provision of bank products...

  18. 12 CFR 303.46 - Financial education programs that include the provision of bank products and services.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... principles of personal financial management, banking operations, or the benefits of saving for the future... 12 Banks and Banking 5 2013-01-01 2013-01-01 false Financial education programs that include the... Branches and Offices § 303.46 Financial education programs that include the provision of bank products...

  19. 12 CFR 303.46 - Financial education programs that include the provision of bank products and services.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... principles of personal financial management, banking operations, or the benefits of saving for the future... 12 Banks and Banking 4 2011-01-01 2011-01-01 false Financial education programs that include the... Branches and Offices § 303.46 Financial education programs that include the provision of bank products...

  20. Magma Fragmentation

    NASA Astrophysics Data System (ADS)

    Gonnermann, Helge M.

    2015-05-01

    Magma fragmentation is the breakup of a continuous volume of molten rock into discrete pieces, called pyroclasts. Because magma contains bubbles of compressible magmatic volatiles, decompression of low-viscosity magma leads to rapid expansion. The magma is torn into fragments, as it is stretched into hydrodynamically unstable sheets and filaments. If the magma is highly viscous, resistance to bubble growth will instead lead to excess gas pressure and the magma will deform viscoelastically by fracturing like a glassy solid, resulting in the formation of a violently expanding gas-pyroclast mixture. In either case, fragmentation represents the conversion of potential energy into the surface energy of the newly created fragments and the kinetic energy of the expanding gas-pyroclast mixture. If magma comes into contact with external water, the conversion of thermal energy will vaporize water and quench magma at the melt-water interface, thus creating dynamic stresses that cause fragmentation and the release of kinetic energy. Lastly, shear deformation of highly viscous magma may cause brittle fractures and release seismic energy.

  1. [Fragment of Receptor for Advanced Glycation End Products Improves Memory State in a Model of Alzheimer's Disease].

    PubMed

    Volpina, O M; Koroev, D O; Volkova, T D; Kamynina, A V; Filatova, M P; Zaporozhskayva, Y V; Samokhin, A N; Aleksandrova, I J; Bobkova, N V

    2015-01-01

    A number of synthetic peptides corresponding to potentially important regions in the sequence of the four membrane proteins known as beta-amyloid cell receptors have been investigated on their ability to improve memory state in experimental model of Alzheimer's disease. Nine fragments repeating all the exposed nonstructural regions of the RAGE protein according to X-ray data, have been synthesized. The activity of these peptides and synthesized earlier immunoprotective fragments of other three proteins (acetylcholine receptor alpha7-type, prion protein and neurotrophin receptor p75) has been investigated under intranasal administration, without immune response to the peptide. Only one fragment RAGE (60-76) was shown to have a therapeutic activity improving the memory state of bulbectomized mice and leads to decreasing in the level of brain beta-amyloid. PMID:27125025

  2. Production of Secondary Radioactive Beams of He and Li Neutron-Rich Isotopes in the Fragmentation Reaction {sup 15}N(47 MeV/A)+{sup 9}Be

    SciTech Connect

    Milewska, Aleksandra

    2007-11-26

    Yields of neutron-rich isotopes of He and Li produced in the reaction {sup 15}N(47 MeV/A)+{sup 9}Be have been measured. The experiment was carried out at the fragment separator COMBAS of the Flerov Laboratory of Nuclear Reactions, JINR (Dubna). Ion beams accelerated with the U-400M cyclotron and thick target were used. The products were identified according to their magnetic rigidities and time of flight (TOF) via the separator. The path length of TOF was 7,5 m. As a result of fragmentation, beams of four isotopes of Lithium and two isotopes of Helium were obtained. The inclusive velocities of reaction products were obtained and isotopes yields were calculated.

  3. Comment on {open_quotes}QCD fragmentation functions for B{sub c} and B{sub c}{sup {asterisk}} production{close_quotes}

    SciTech Connect

    Ji, C.; Binger, M.; Amiri, F.

    1998-06-01

    For the inclusive production process of heavy pseudoscalar and vector mesons in e{sup +}e{sup {minus}} annihilation, we have improved the analytic calculation of the fragmentation function of heavy quarks up to {tau}{sup 2}ln({tau}{sup 2}) where {tau}{sup 2}=4m{sup 2}/s, m is the meson mass, and s is the square of the total c.m. energy. {copyright} {ital 1998} {ital The American Physical Society}

  4. SKI2 mediates degradation of RISC 5′-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis

    PubMed Central

    Branscheid, Anja; Marchais, Antonin; Schott, Gregory; Lange, Heike; Gagliardi, Dominique; Andersen, Stig Uggerhøj; Voinnet, Olivier; Brodersen, Peter

    2015-01-01

    Small regulatory RNAs are fundamental in eukaryotic and prokaryotic gene regulation. In plants, an important element of post-transcriptional control is effected by 20–24 nt microRNAs (miRNAs) and short interfering RNAs (siRNAs) bound to the ARGONAUTE1 (AGO1) protein in an RNA induced silencing complex (RISC). AGO1 may cleave target mRNAs with small RNA complementarity, but the fate of the resulting cleavage fragments remains incompletely understood. Here, we show that SKI2, SKI3 and SKI8, subunits of a cytoplasmic cofactor of the RNA exosome, are required for degradation of RISC 5′, but not 3′-cleavage fragments in Arabidopsis. In the absence of SKI2 activity, many miRNA targets produce siRNAs via the RNA-dependent RNA polymerase 6 (RDR6) pathway. These siRNAs are low-abundant, and map close to the cleavage site. In most cases, siRNAs were produced 5′ to the cleavage site, but several examples of 3′-spreading were also identified. These observations suggest that siRNAs do not simply derive from RDR6 action on stable 5′-cleavage fragments and hence that SKI2 has a direct role in limiting secondary siRNA production in addition to its function in mediating degradation of 5′-cleavage fragments. PMID:26464441

  5. An extended gene protein/products boolean network model including post-transcriptional regulation

    PubMed Central

    2014-01-01

    Background Networks Biology allows the study of complex interactions between biological systems using formal, well structured, and computationally friendly models. Several different network models can be created, depending on the type of interactions that need to be investigated. Gene Regulatory Networks (GRN) are an effective model commonly used to study the complex regulatory mechanisms of a cell. Unfortunately, given their intrinsic complexity and non discrete nature, the computational study of realistic-sized complex GRNs requires some abstractions. Boolean Networks (BNs), for example, are a reliable model that can be used to represent networks where the possible state of a node is a boolean value (0 or 1). Despite this strong simplification, BNs have been used to study both structural and dynamic properties of real as well as randomly generated GRNs. Results In this paper we show how it is possible to include the post-transcriptional regulation mechanism (a key process mediated by small non-coding RNA molecules like the miRNAs) into the BN model of a GRN. The enhanced BN model is implemented in a software toolkit (EBNT) that allows to analyze boolean GRNs from both a structural and a dynamic point of view. The open-source toolkit is compatible with available visualization tools like Cytoscape and allows to run detailed analysis of the network topology as well as of its attractors, trajectories, and state-space. In the paper, a small GRN built around the mTOR gene is used to demonstrate the main capabilities of the toolkit. Conclusions The extended model proposed in this paper opens new opportunities in the study of gene regulation. Several of the successful researches done with the support of BN to understand high-level characteristics of regulatory networks, can now be improved to better understand the role of post-transcriptional regulation for example as a network-wide noise-reduction or stabilization mechanisms. PMID:25080304

  6. Production in yeast of pseudotype virus-like particles harboring functionally active antibody fragments neutralizing the cytolytic activity of vaginolysin

    PubMed Central

    2011-01-01

    Background Recombinant antibodies can be produced in different formats and different expression systems. Single chain variable fragments (scFvs) represent an attractive alternative to full-length antibodies and they can be easily produced in bacteria or yeast. However, the scFvs exhibit monovalent antigen-binding properties and short serum half-lives. The stability and avidity of the scFvs can be improved by their multimerization or fusion with IgG Fc domain. The aim of the current study was to investigate the possibilities to produce in yeast high-affinity scFv-Fc proteins neutralizing the cytolytic activity of vaginolysin (VLY), the main virulence factor of Gardnerella vaginalis. Results The scFv protein derived from hybridoma cell line producing high-affinity neutralizing antibodies against VLY was fused with human IgG1 Fc domain. Four different variants of anti-VLY scFv-Fc fusion proteins were constructed and produced in yeast Saccharomyces cerevisiae. The non-tagged scFv-Fc and hexahistidine-tagged scFv-Fc proteins were found predominantly as insoluble aggregates and therefore were not suitable for further purification and activity testing. The addition of yeast α-factor signal sequence did not support secretion of anti-VLY scFv-Fc but increased the amount of its intracellular soluble form. However, the purified protein showed a weak VLY-neutralizing capability. In contrast, the fusion of anti-VLY scFv-Fc molecules with hamster polyomavirus-derived VP2 protein and its co-expression with VP1 protein resulted in an effective production of pseudotype virus-like particles (VLPs) that exhibited strong VLY-binding activity. Recombinant scFv-Fc molecules displayed on the surface of VLPs neutralized VLY-mediated lysis of human erythrocytes and HeLa cells with high potency comparable to that of full-length antibody. Conclusions Recombinant scFv-Fc proteins were expressed in yeast with low efficiency. New approach to display the scFv-Fc molecules on the surface of

  7. Determination of the cross sections for the production of fragments from relativistic nucleus-nucleus interactions. II. Parametric fits

    SciTech Connect

    Cummings, J.R.; Binns, W.R.; Garrard, T.L.; Israel, M.H.; Klarmann, J.; Stone, E.C.; Waddington, C.J. Department of Physics, Washington University, St. Louis, MO )

    1990-12-01

    Measurements of the partial charge-changing cross sections for the fragmentation of relativistic iron, lanthanum, holmium, and gold nuclei of several different energies incident on targets of polyethylene, carbon, aluminum, and copper have been reported in an accompanying paper. This paper describes the systematics of the variations of these cross sections with energy, projectile, target, and fragment. We have been able to generate a seven-parameter global fit to 795 measured cross sections for the heavy targets which fits the data with a standard deviation of 7%. We have also generated a similar global fit to 303 measured cross sections for a hydrogen target which fits the data with a standard deviation of 10%. These representations imply that the hypothesis of limiting fragmentation is only accurate to some 20--30 %. Weak factorization can apply, but fits that are marginally better, and more physically plausible, can be obtained without factorization. We have identified, and discussed, a number of caveats to the applicability of these fits outside, and inside, the range of energies and masses covered. Excessively large cross sections for the loss of a single proton from the projectile nuclei suggest electromagnetic dissociation. The cross sections for fragments that experience large charge changes appear to become independent of the size of the charge change. Very heavy projectiles have a significant probability of experiencing fission.

  8. Forest Fragmentation

    EPA Science Inventory

    This indicator describes forest fragmentation in the contiguous United States circa 2001. This information provides a broad, recent picture of the spatial pattern of the nation’s forests and the extent to which they are being broken into smaller patches and pierced or interspe...

  9. In situ measurement of the particle size distribution of the fragmentation product of laser-shock-melted aluminum using in-line picosecond holography

    NASA Astrophysics Data System (ADS)

    Li, Ying-Hua; Zhao, Yu; Li, Xue-Mei; Zhang, Zu-Gen; Ye, Xiang-Ping; Zhong, Jie; Cai, Ling-Cang; Zhang, Lin

    2016-02-01

    The dynamic fragmentation of shock-melted metal is a topic of increasing interest in shock physics. However, high-quality experimental studies of the phenomenon are limited, and data that are essential for developing predictive models of the phenomenon, such as the mass and particle sizes distributions, are quite sparse. In-line holography is an effective non-contact technique for measuring particle size distribution, but critical technical requirements, in particular, particle density limits, complicate its application to the subject phenomenon. These challenges have been reasonably overcome in the present study, allowing for successful in situ measurements of the size distribution of the fragmentation product from laser-shock-melted aluminum. In this letter, we report on our experiments and present the measured data.

  10. 78 FR 1252 - CalAmp Wireless Networks Corporation (CWNC), Satellite Products Division, Including On-Site...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-08

    ... December 13, 2011 (76 FR 77556). At the request of the State of Minnesota, the Department reviewed the... Division, Including On-Site Leased Workers From Select Staffing, Oxnard, CA; CalAmp Wireless Networks... Select Staffing, Oxnard, California (TA-W-80,399). The workers are engaged in the production of...

  11. 75 FR 57505 - Dell Products LP, Winston-Salem (WS-1) Division, Including On-Site Leased Workers From Adecco...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-21

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF LABOR Employment and Training Administration Dell Products LP, Winston-Salem (WS-1) Division, Including On- Site Leased Workers From Adecco, Spherion, Patriot Staffing, Manpower, Teksystems, APN, ICONMA, Staffing Solutions, South East and OMNI Resources...

  12. Resolvin D1, Protectin D1, and Related Docosahexaenoic Acid-Derived Products: Analysis via Electrospray/Low Energy Tandem Mass Spectrometry based on Spectra and Fragmentation Mechanisms

    PubMed Central

    Hong, Song; Lu, Yan; Yang, Rong; Gotlinger, Katherine H.; Petasis, Nicos P.; Serhan, Charles N.

    2009-01-01

    Resolvin D1 (RvD1) and Protectin D1 (Neuroprotectin D1, PD1/NPD1) are newly identified anti-inflammatory lipid mediators biosynthesized from docosahexaenoic acid (DHA). In this report, the spectra-structure correlations and fragmentation mechanisms were studied using electrospray low-energy collision-induced dissociation tandem mass spectrometry (MS/MS) for biogenic RvD1 and PD1, as well as mono-hydroxy-DHA and related hydroperoxy-DHA. The loss of H2O and CO2 in the spectra indicates the number of functional group(s). Chain-cut ions are the signature of the positions and numbers of functional groups and double-bonds. The observed chain-cut ion is equivalent to a hypothetical homolytic-segment (cc, cm, mc, or mm) with addition or extraction of up to 2 protons (H). The α-cleavage ions are equivalent to: [cc + H], with H from the hydroxyl through a β-ene or γ-ene rearrangement; [cm - 2H], with 2H from hydroxyls of PD1 through a γ-ene rearrangement, or one H from the hydroxyl and the other H from the α-carbon of mono-HDHA through an α-H-β-ene rearrangement; [mc – H], with H from hydroxyl through a β-ene or γ-ene rearrangement, or from the α-carbon through an α-H-β-ene rearrangement; or [mm] through charge-direct fragmentations. The β-ene or γ-ene facilitates the H shift to γ position and α-cleavage. Deuterium labeling confirmed the assignment of MS/MS ions and the fragmentation mechanisms. Based on the MS/MS spectra and fragmentation mechanisms, we identified RvD1, PD1, and mono-hydroxy-DHA products in human neutrophils and blood, trout head-kidney, and stroke-injury murine brain-tissues. PMID:17055291

  13. Structural elucidation of monoterpene oxidation products by ion trap fragmentation using on-line atmospheric pressure chemical ionisation mass spectrometry in the negative ion mode.

    PubMed

    Warscheid, B; Hoffmann, T

    2001-01-01

    Based on ion trap mass spectrometry, an on-line method is described which provides valuable information on the molecular composition of structurally complex organic aerosols. The investigated aerosols were generated from the gas-phase ozonolysis of various C(10)H(16)-terpenes (alpha-pinene, beta-pinene, 3-carene, sabinene, limonene), and directly introduced into the ion source of the mass spectrometer. Negative ion chemical ionisation at atmospheric pressure (APCI(-)) enabled the detection of multifunctional carboxylic acid products by combining inherent sensitivity and molecular weight information. Sequential low-energy collision-induced product ion fragmentation experiments (MS(n)) were performed in order to elucidate characteristic decomposition pathways of the compounds. Dicarboxylic acids, oxocarboxylic acids and hydroxyketocarboxylic acid products could be clearly distinguished by multistage on-line MS. Furthermore, sabinonic acid and two C(9)-ether compounds were tentatively identified for the first time by applying on-line APCI(-)-MS(n). PMID:11746892

  14. Data of rational process optimization for the production of a full IgG and its Fab fragment from hybridoma cells.

    PubMed

    Röhm, Martina; Handl, Alina; König, Maria; Mavoungou, Chrystelle; Handrick, René; Schindowski, Katharina

    2016-09-01

    This data article focuses on the production of monoclonal antibodies (mAb) and their fragments Fab and F(ab')2. Here, we present the data of an optimization protocol to improve the product yield of a hybridoma cell process using a Design of Experiment (DoE) strategy. Furthermore, the data of the evaluated conditions were used to test feeding strategies in shake flasks. They were verified in controlled 2 L fed-batch bioreactor processes. Supplementing the culture medium with human insulin-like growth factor-I (IGF-I) and Pluronic F-68, as well as a nutrient rich additive for fed-batch, resulted in improved cell growth correlating with a 7 day elongated process time and a 4.5 fold higher product titer. Finally, a rapid Fab generation protocol and the respective data are presented using different papain digestion and a camelid anti-kappa light chain VHH affinity ligand. PMID:27366780

  15. Perturbative fragmentation

    SciTech Connect

    Kopeliovich, B. Z.; Pirner, H.-J.; Potashnikova, I. K.; Schmidt, Ivan; Tarasov, A. V.

    2008-03-01

    The Berger model of perturbative fragmentation of quarks to pions is improved by providing an absolute normalization and keeping all terms in a (1-z) expansion, which makes the calculation valid at all values of fractional pion momentum z. We also replace the nonrelativistic wave function of a loosely bound pion by the more realistic procedure of projecting to the light-cone pion wave function, which in turn is taken from well known models. The full calculation does not confirm the (1-z){sup 2} behavior of the fragmentation function (FF) predicted in [E. L. Berger, Z. Phys. C 4, 289 (1980); Phys. Lett. 89B, 241 (1980] for z>0.5, and only works at very large z>0.95, where it is in reasonable agreement with phenomenological FFs. Otherwise, we observe quite a different z-dependence which grossly underestimates data at smaller z. The disagreement is reduced after the addition of pions from decays of light vector mesons, but still remains considerable. The process dependent higher twist terms are also calculated exactly and found to be important at large z and/or p{sub T}.

  16. Production, characterisation and immunogenicity of a plant-made Plasmodium antigen--the 19 kDa C-terminal fragment of Plasmodium yoelii merozoite surface protein 1.

    PubMed

    Ma, Charles; Wang, Lina; Webster, Diane E; Campbell, Alison E; Coppel, Ross L

    2012-04-01

    Development of a safe, effective and affordable malaria vaccine is central to global disease control efforts. One of the most highly regarded proteins for inclusion in an asexual blood stage subunit vaccine is the 19-kDa C-terminal fragment of merozoite surface protein 1 (MSP1(19)). As production of vaccine antigens in plants can potentially overcome cost and delivery hurdles, we set out to produce MSP1(19) in plants, characterise the protein and test its immunogenicity using a mouse model. Plasmodium yoelii MSP1(19) (PyMSP1(19)) was produced in Nicotiana benthamiana using the MagnICON® deconstructed TMV-based viral vector. PyMSP1(19) yield of at least 23% total soluble protein (TSP;3-4 mg/g Fwt) were achieved using a codon-optimised construct that was targeted to the apoplast. Freeze-dried leaf powder contained at least 20 mg PyMSP1(19) per gram dry weight and the protein retained immunogenicity in this form for more than 2 years. Characterisation studies, including SDS-PAGE, mass spectrometry and circular dichroism, indicated that the plant-expressed PyMSP1(19) was similar to its Escherichia coli- and Saccharomyces cerevisiae-expressed counterparts. Purified plant-made PyMSP1(19) induced strong immune responses following intraperitoneal immunisation, although titres were lower than those induced by an equivalent dose of purified E. coli-expressed PyMSP1(19). The reason for this is uncertain but may be due to differences in the oligomerisation profile of the vaccines. The plant-made PyMSP1(19) vaccine was also found to be orally immunogenic when delivered alone or following immunisation with a PyMSP1(19) DNA vaccine. This study adds to an increasing body of research supporting the feasibility of plants as both a factory for the production of malaria antigens, and as a safe and affordable platform for oral delivery of a temperature-stable malaria vaccine. PMID:22170105

  17. Low-energy mass-selected ion beam production of fragments produced from hexamethyldisilane for SiC film formation

    NASA Astrophysics Data System (ADS)

    Yoshimura, Satoru; Sugimoto, Satoshi; Kiuchi, Masato

    2016-03-01

    We have proposed an experimental methodology which makes it possible to deposit silicon carbide (SiC) films on Si substrates with a low-energy mass-selected ion beam system using hexamethyldisilane (HMD) as a gas source. In this study, one of the fragment ions produced from HMD, SiCH4+, was mass-selected. The ion energy was approximately 100 eV. Then, the SiCH4+ ions were irradiated to a Si(100) substrate. When the temperature of the Si substrate was set at 800 °C during the ion irradiation, the X-ray diffraction and Raman spectroscopy of the substrate following the completion of ion irradiation experiment demonstrated the occurrence of 3C-SiC deposition.

  18. Cross sections for the production of fragments with Z greater than or equal to 8 by fragmentation of Z greater than or equal to 9 and less than or equal to 26 nuclei

    NASA Technical Reports Server (NTRS)

    Heinrich, W.; Drechsel, H.; Brechtmann, C.; Beer, J.

    1985-01-01

    Charge changing nuclear collisions in plastic nuclear track detectors were studied using a new experimental technique of automatic track measurement for etched tracks in plastic detectors. Partial cross sections for the production of fragments of charge Z approximately 8 were measured for projectile nuclei of charge 9 approximately Z approximately 26 in the detector material CR39 and in silver. for this purpose three independent experiments were performed using Bevalac beams. The first one was an exposure of a stack of CR39 plastic plates to 1.8 GeV/nucl. Ar-40 nuclei. The second one was an exposure of another CR39 stack of 1.7 GeV/nucl. Fe-56 projectiles. In the third experiment a mixed stack of CR39 plates and silver foils was irradiated with 1.7 GeV/nucl. Fe-56 nuclei. Thus the measurement of nuclear cross sections in a light target (CR39 = C12H18O7) and as well in a heavy target (silver) was possible.

  19. Production and characterization of a biotinylated single-chain variable fragment antibody for detection of parathion-methyl.

    PubMed

    Wang, Huimin; Zhao, Fengchun; Han, Xiao; Yang, Zhengyou

    2016-10-01

    In this article, we reported the development of a biotinylated single-chain variable fragment (scFv) antibody based indirect competitive enzyme-linked immunosorbent assay (IC-ELISA) for parathion-methyl (PM) detection. Firstly, a phage display library was generated using a pre-immunized BALB/C mouse against a specific hapten of PM. After four rounds of panning, the scFv gene fragments were transferred into a secreted expression vector. Then, the scFv antibodies were secreted expressed and screened by IC-ELISA against PM. The selected scFv antibody was fused with a biotin acceptor domain (BAD) and inserted into pET-28a(+) vector for high-level expression in Escherichia coli BL2 (DE3). After optimizing expression conditions, the scFv-BAD antibody was expressed as a soluble protein and biotinylated in vitro by the E. coli biotin ligase (BirA). Subsequently, the biotinylated scFv-BAD antibody was purified with a high yield of 59.2 ± 3.7 mg/L of culture, and was characterized by SDS-PAGE and western blotting. Finally, based on the biotinylated scFv-BAD, a sensitive IC-ELISA for detection of PM was developed, and the 50% inhibition value (IC50) of PM was determined as 14.5 ng/mL, with a limit of detection (LOD, IC10) of 0.9 ng/mL. Cross-reactivity (CR) studies revealed that the scFv antibody showed desirable specificity for PM. PMID:27181246

  20. Relativistic and binding energy corrections to heavy quark fragmentation functions

    SciTech Connect

    Yusuf, M.A.; Bashir, A.

    1997-11-01

    We calculate the fragmentation function for a charm quark to decay inclusively into S-wave charmonium states, including relativistic and binding energy corrections in powers of the quark relative velocity v. We also use these fragmentation functions to estimate their contribution to the production rate of {eta}{sub c} and J/{psi} in Z{sup 0} decay. These corrections contribute about 38{percent} to the integrated c{r_arrow}J/{psi}+X fragmentation. For {eta}{sub c}, these corrections are found to be small. {copyright} {ital 1997} {ital The American Physical Society}

  1. The Poincar group in a demisemidirect product with a non-associative algebra with representations that Include particles and quarks

    SciTech Connect

    Schroeck, Franklin E.

    2008-11-18

    The quarks have always been a puzzle, as have the particles' mass and mass/spin relations as they seemed to have no coordinates in configuration space and/or momentum space. The solution to this seems to lie in the marriage of ordinary Poincare group representations with a non-associative algebra made through a demisemidirect product. Then, the work of G. Dixon applies; so, we may obtain all the relations between masses, mass and spin, and the attribution of position and momentum to quarks--this in spite of the old restriction that the Poincare group cannot be extended to a larger group by any means (including the (semi)direct product) to get even the mass relations. Finally, we will briefly discuss a possible connection between the phase space representations of the Poincare group and the phase space representations of the object we will obtain. This will take us into Leibniz (co)homology.

  2. Enantioselective total synthesis of callipeltoside A: two approaches to the macrolactone fragment

    PubMed Central

    Evans, David A.; Burch, Jason D.; Hu, Essa; Jaeschke, Georg

    2012-01-01

    The enantioselective total synthesis of callipeltoside A is described. Two syntheses of the macrolactone subunit are included: the first relies upon an Ireland–Claisen rearrangement to generate the trisubstituted olefin geometry and the second utilizes an enantioselective vinylogous aldol reaction for this purpose. Enantioselective syntheses of the sugar and chlorocyclopropane side chain fragments are also disclosed. The relative and absolute stereochemistry of this natural product was determined by fragment coupling with the two enantiomers of the side chain fragment. PMID:22859865

  3. LC-MS/MS structural characterization of stress degradation products including the development of a stability indicating assay of Darunavir: An anti-HIV drug.

    PubMed

    Rao, R Nageswara; Ramachandra, B; Sravan, B; Khalid, Sara

    2014-02-01

    Darunavir, an anti-HIV drug was subjected to forced degradation under acid, base, thermal and neutral hydrolysis, oxidation and photolysis as prescribed by ICH guidelines. Four major degradation products were formed under acid and base hydrolysis, while stable under neutral and thermal hydrolysis, oxidative and photolysis. The drug and its degradation products were separated on Hiber, LiChrospher® 60, RP-select B, C8 column (250mm×4.6mm i.d., 5μm) using 10mM ammonium acetate: acetonitrile (52:48, v/v) as mobile phase in an isocratic elution mode by LC. The degradation products were characterized by LC-MS/MS and fragmentation pathways were proposed. The proposed structures of degradation products were confirmed by HRMS and the LC method was validated with respect to specificity, linearity, accuracy, recovery, LOD and LOQ. PMID:24252722

  4. Toward the Total Synthesis of Scleritodermin A: Preparation of the C1-N15 Fragment

    PubMed Central

    Sellanes, Diver; Manta, Eduardo; Serra, Gloria

    2007-01-01

    The synthesis of the C1-N15 fragment of the marine natural product Scleritodermin A has been accomplished through a short and stereocontrolled sequence. Highlights of this route include the synthesis of the novel ACT fragment and the formation of the α-keto amide linkage by the use of a highly activated α, β-ketonitrile. PMID:18320006

  5. Including impacts of particulate emissions on marine ecosystems in life cycle assessment: the case of offshore oil and gas production.

    PubMed

    Veltman, Karin; Huijbregts, Mark A J; Rye, Henrik; Hertwich, Edgar G

    2011-10-01

    Life cycle assessment is increasingly used to assess the environmental performance of fossil energy systems. Two of the dominant emissions of offshore oil and gas production to the marine environment are the discharge of produced water and drilling waste. Although environmental impacts of produced water are predominantly due to chemical stressors, a major concern regarding drilling waste discharge is the potential physical impact due to particles. At present, impact indicators for particulate emissions are not yet available in life cycle assessment. Here, we develop characterization factors for 2 distinct impacts of particulate emissions: an increased turbidity zone in the water column and physical burial of benthic communities. The characterization factor for turbidity is developed analogous to characterization factors for toxic impacts, and ranges from 1.4 PAF (potentially affected fraction) · m(3) /d/kg(p) (kilogram particulate) to 7.0 x 10³ [corrected] for drilling mud particles discharged from the rig. The characterization factor for burial describes the volume of sediment that is impacted by particle deposition on the seafloor and equals 2.0 × 10(-1) PAF · m(3) /d/kg(p) for cutting particles. This characterization factor is quantified on the basis of initial deposition layer characteristics, such as height and surface area, the initial benthic response, and the recovery rate. We assessed the relevance of including particulate emissions in an impact assessment of offshore oil and gas production. Accordingly, the total impact on the water column and on the sediment was quantified based on emission data of produced water and drilling waste for all oil and gas fields on the Norwegian continental shelf in 2008. Our results show that cutting particles contribute substantially to the total impact of offshore oil and gas production on marine sediments, with a relative contribution of 55% and 31% on the regional and global scale, respectively. In contrast, the

  6. Identification of framework residues in a secreted recombinant antibody fragment that control production level and localization in Escherichia coli.

    PubMed

    Forsberg, G; Forsgren, M; Jaki, M; Norin, M; Sterky, C; Enhörning, A; Larsson, K; Ericsson, M; Björk, P

    1997-05-01

    The monoclonal antibody 5T4, directed against a human tumor-associated antigen, was expressed as a secreted Fab superantigen fusion protein in Escherichia coli. The product is a putative agent for immunotherapy of non-small cell lung cancer. During fermentation, most of the fusion protein leaked out from the periplasm to the growth medium at a level of approximately 40 mg/liter. This level was notably low compared with similar products containing identical CH1, CL, and superantigen moieties, and the Fv framework was therefore engineered. Using hybrid molecules, the light chain was found to limit high expression levels. Substituting five residues in VL increased the level almost 15 times, exceeding 500 mg/liter in the growth medium. Here, the substitutions Phe-10 --> Ser, Thr-45 --> Lys, Thr-77 --> Ser, and Leu-78 --> Val were most powerful. In addition, replacing four VH residues diminished cell lysis during fermentation. Thereby the product was preferentially located in the periplasm instead of the growth medium, and the total yield was more than 700 mg/liter. All engineered products retained a high affinity for the tumor-associated antigen. It is suggested that at least some of the identified framework residues generally have to be replaced to obtain high level production of recombinant Fab products in E. coli. PMID:9139690

  7. Production of a soluble single-chain variable fragment antibody against okadaic acid and exploration of its specific binding.

    PubMed

    He, Kuo; Zhang, Xiuyuan; Wang, Lixia; Du, Xinjun; Wei, Dong

    2016-06-15

    Okadaic acid is a lipophilic marine algal toxin commonly responsible for diarrhetic shellfish poisoning (DSP). Outbreaks of DSP have been increasing and are of worldwide public health concern; therefore, there is a growing demand for more rapid, reliable, and economical analytical methods for the detection of this toxin. In this study, anti-okadaic acid single-chain variable fragment (scFv) genes were prepared by cloning heavy and light chain genes from hybridoma cells, followed by fusion of the chains via a linker peptide. An scFv-pLIP6/GN recombinant plasmid was constructed and transformed into Escherichia coli for expression, and the target scFv was identified with IC-CLEIA (chemiluminescent enzyme immunoassay). The IC15 was 0.012 ± 0.02 μg/L, and the IC50 was 0.25 ± 0.03 μg/L. The three-dimensional structure of the scFv was simulated with computer modeling, and okadaic acid was docked to the scFv model to obtain a putative structure of the binding complex. Two predicted critical amino acids, Ser32 and Thr187, were then mutated to verify this theoretical model. Both mutants exhibited significant loss of binding activity. These results help us to understand this specific scFv-antigen binding mechanism and provide guidance for affinity maturation of the antibody in vitro. The high-affinity scFv developed here also has potential for okadaic acid toxin detection. PMID:26772159

  8. IMPACT fragmentation model developments

    NASA Astrophysics Data System (ADS)

    Sorge, Marlon E.; Mains, Deanna L.

    2016-09-01

    The IMPACT fragmentation model has been used by The Aerospace Corporation for more than 25 years to analyze orbital altitude explosions and hypervelocity collisions. The model is semi-empirical, combining mass, energy and momentum conservation laws with empirically derived relationships for fragment characteristics such as number, mass, area-to-mass ratio, and spreading velocity as well as event energy distribution. Model results are used for several types of analysis including assessment of short-term risks to satellites from orbital altitude fragmentations, prediction of the long-term evolution of the orbital debris environment and forensic assessments of breakup events. A new version of IMPACT, version 6, has been completed and incorporates a number of advancements enabled by a multi-year long effort to characterize more than 11,000 debris fragments from more than three dozen historical on-orbit breakup events. These events involved a wide range of causes, energies, and fragmenting objects. Special focus was placed on the explosion model, as the majority of events examined were explosions. Revisions were made to the mass distribution used for explosion events, increasing the number of smaller fragments generated. The algorithm for modeling upper stage large fragment generation was updated. A momentum conserving asymmetric spreading velocity distribution algorithm was implemented to better represent sub-catastrophic events. An approach was developed for modeling sub-catastrophic explosions, those where the majority of the parent object remains intact, based on estimated event energy. Finally, significant modifications were made to the area-to-mass ratio distribution to incorporate the tendencies of different materials to fragment into different shapes. This ability enabled better matches between the observed area-to-mass ratios and those generated by the model. It also opened up additional possibilities for post-event analysis of breakups. The paper will discuss

  9. Pump apparatus including deconsolidator

    DOEpatents

    Sonwane, Chandrashekhar; Saunders, Timothy; Fitzsimmons, Mark Andrew

    2014-10-07

    A pump apparatus includes a particulate pump that defines a passage that extends from an inlet to an outlet. A duct is in flow communication with the outlet. The duct includes a deconsolidator configured to fragment particle agglomerates received from the passage.

  10. Bioenergy production from perennial energy crops: a consequential LCA of 12 bioenergy scenarios including land use changes.

    PubMed

    Tonini, Davide; Hamelin, Lorie; Wenzel, Henrik; Astrup, Thomas

    2012-12-18

    In the endeavor of optimizing the sustainability of bioenergy production in Denmark, this consequential life cycle assessment (LCA) evaluated the environmental impacts associated with the production of heat and electricity from one hectare of Danish arable land cultivated with three perennial crops: ryegrass (Lolium perenne), willow (Salix viminalis) and Miscanthus giganteus. For each, four conversion pathways were assessed against a fossil fuel reference: (I) anaerobic co-digestion with manure, (II) gasification, (III) combustion in small-to-medium scale biomass combined heat and power (CHP) plants and IV) co-firing in large scale coal-fired CHP plants. Soil carbon changes, direct and indirect land use changes as well as uncertainty analysis (sensitivity, MonteCarlo) were included in the LCA. Results showed that global warming was the bottleneck impact, where only two scenarios, namely willow and Miscanthus co-firing, allowed for an improvement as compared with the reference (-82 and -45 t CO₂-eq. ha⁻¹, respectively). The indirect land use changes impact was quantified as 310 ± 170 t CO₂-eq. ha⁻¹, representing a paramount average of 41% of the induced greenhouse gas emissions. The uncertainty analysis confirmed the results robustness and highlighted the indirect land use changes uncertainty as the only uncertainty that can significantly change the outcome of the LCA results. PMID:23126612

  11. Coherent π{sup 0}-photoproduction on the deuteron near the η-production threshold including polarization observables

    SciTech Connect

    Darwish, Eed M.; Al-Thoyaib, Suleiman S.

    2014-12-15

    Coherent π{sup 0}-photoproduction on the deuteron including polarization observables is studied in the energy region near the η-production threshold at backward center-of-mass angles of the outgoing pion. This work is motivated by the measurements of the CLAS Collaboration at Jefferson Lab, where a cusp-like structure in the energy dependence of the differential cross section has been observed at extremely backward pion angles. The present approach is based on the impulse approximation and first-order rescattering diagrams with intermediate production of both π- and η-mesons. Numerical results for unpolarized cross sections, the linear photon asymmetry (Σ), the vector (T{sub 11}) and tensor (T{sub 2M}, M=0, 1, 2) deuteron target asymmetries, and the double polarization E-asymmetry are predicted and compared with available experimental data and other theoretical models. The effect of first-order rescattering is found to be much larger in spin asymmetries than in the unpolarized cross sections. It reaches on average about 40% in the tensor target and E asymmetries. Compared to the experimental data from CLAS Collaboration, sizable discrepancies are found. This is not the case for the linear photon asymmetry, for which a better comparison with the data from YerPhI Collaboration is obtained.

  12. The rpoN gene product of Pseudomonas aeruginosa is required for expression of diverse genes, including the flagellin gene.

    PubMed Central

    Totten, P A; Lara, J C; Lory, S

    1990-01-01

    The product of the rpoN gene is an alternative sigma factor of RNA polymerase which is required for transcription of a number of genes in members of the family Enterobacteriaceae, including those that specify enzymes of nitrogen assimilation, amino acid uptake, and degradation of a variety of organic molecules. We have previously shown that transcription of the pilin gene of Pseudomonas aeruginosa also requires RpoN (K. S. Ishimoto and S. Lory, Proc. Natl. Acad. Sci. USA 86:1954-1957, 1989) and have undertaken a more extensive survey of genes under RpoN control. Strains of P. aeruginosa that carry an insertionally inactivated rpoN gene were constructed and shown to be nonmotile because of the inability of these mutants to synthesize flagellin. The mutation in rpoN had no effect on expression of extracellular polypeptides, outer membrane proteins, and the alginate capsule. However, the rpoN mutants were glutamine auxotrophs and were defective in glutamine synthetase, indicating defects in nitrogen assimilation. In addition, the P. aeruginosa rpoN mutants were defective in urease activity. These findings indicate that the sigma factor encoded by the rpoN gene is used by P. aeruginosa for transcription of a diverse set of genes that specify biosynthetic enzymes, degradative enzymes, and surface components. These rpoN-controlled genes include pili and flagella which are required for full virulence of the organism. Images FIG. 1 FIG. 2 PMID:2152909

  13. The Evolution of Grain Size Distribution in Explosive Rock Fragmentation - Sequential Fragmentation Theory Revisited

    NASA Astrophysics Data System (ADS)

    Scheu, B.; Fowler, A. C.

    2015-12-01

    including in the description of the fracturing events in which the rock fragments, with a recipe for the production of fines, as observed in the experiments. To our knowledge, this implementation of a deterministic fracturing process into a stochastic (sequential) model is unique, further it provides the model with some forecasting power.

  14. Neutron productions in the fragmentation of relativistic heavy nuclei and formation of a beam of high-energy neutrons

    NASA Astrophysics Data System (ADS)

    Yurevich, V. I.

    2016-03-01

    The production of quasimonoenergetic high-energy neutrons at zero angle (0°) in the spallation of relativistic heavy nuclei is discussed by considering the example of the interaction of lead nuclei with light target nuclei. It is shown that this process can be used to generate a beam of high-energy neutrons at existing heavy ion accelerators. At the same time, itmay lead to the appearance of a parasitic neutron beam because of the interaction of the heavy-ion beam used with beam line and experimental setup materials.

  15. Analyzing Unfavored Fragmentation Functions Using NJL-Jet Model

    SciTech Connect

    Matevosyan, Hrayr H.; Thomas, Anthony W.; Bentz, Wolfgang

    2011-10-24

    The Nambu-Jona-Lasinio (NJL)-jet model provides a sound framework for calculating the fragmentation functions in an effective chiral quark theory, where the momentum and isospin sum rules are satisfied without the introduction of ad hoc parameters. The most recent version of the model includes the fragmentation of the light and strange quarks to pions, kaons, nucleons, and antinucleons; where the effects of the production of secondary pions and kaons from the vector mesons {rho}, K* and {phi} are also calculated. The results for the model fragmentation function exhibit a qualitative agreement with the empirical parameterizations. The results also allow to test, within the model assumptions, several assumption in parametrizations of the unfavored fragmentation functions used in empirical fits to the experimental data.

  16. Heavy Ion Fragmentation Experiments at the Bevatron

    NASA Technical Reports Server (NTRS)

    Heckman, H. H.

    1975-01-01

    Fragmentation processes of heavy nuclei in matter using the heavy-ion capability of the Bevatron were studied. The purpose was to obtain the single particle inclusive spectra of secondary nuclei produced at 0 deg by the fragmentation of heavy ion beam projectiles. The process being examined is B+T yields F + anything, where B is the beam nucleus, T is the target nucleus, and F is the detected fragment. The fragments F are isotopically identified by experimental procedures involving magnetic analysis, energy loss and time-of-flight measurements. Attempts were also made to: (1) measure the total and partial production cross section for all isotopes, (2) test the applicability of high-energy multi-particle interaction theory to nuclear fragmentation, (3) apply the cross-section data and fragmentation probabilities to cosmic ray transport theory, and (4) search for systematic behavior of fragment production as a means to improve existing semi-empirical theories of cross sections.

  17. Production of the 42-kDa fragment of Plasmodium falciparum merozoite surface protein 1, a leading malaria vaccine antigen, in Arabidopsis thaliana seeds.

    PubMed

    Lau, On Sun; Ng, Danny W-K; Chan, Wendy W L; Chang, Sandra P; Sun, Samuel S M

    2010-12-01

    Malaria is widely associated with poverty, and a low-cost vaccine against malaria is highly desirable for implementing comprehensive vaccination programmes in developing countries. Production of malaria antigens in plants is a promising approach, but its development has been hindered by poor expression of the antigens in plant cells. In the present study, we targeted plant seeds as a low-cost vaccine production platform and successfully expressed the Plasmodium falciparum 42-kDa fragment of merozoite surface protein 1 (MSP1₄₂), a leading malaria vaccine candidate, at a high level in transgenic Arabidopsis seeds. We overcame hurdles of transcript and protein instabilities of MSP1₄₂ in plants by synthesizing a plant-optimized MSP1₄₂ cDNA and either targeting the recombinant protein to protein storage vacuoles or fusing it with a stable plant storage protein. An exceptional improvement in MSP1₄₂ expression, from an undetectable level to 5% of total extractable protein, was achieved with these combined strategies. Importantly, the plant-derived MSP1₄₂ maintains its natural antigenicity and can be recognized by immune sera from malaria-infected patients. Our results provide a strong basis for the development of a plant-based, low-cost malaria vaccine. PMID:20444208

  18. Double Gene Targeting Multiplex Polymerase Chain Reaction-Restriction Fragment Length Polymorphism Assay Discriminates Beef, Buffalo, and Pork Substitution in Frankfurter Products.

    PubMed

    Hossain, M A Motalib; Ali, Md Eaqub; Abd Hamid, Sharifah Bee; Asing; Mustafa, Shuhaimi; Mohd Desa, Mohd Nasir; Zaidul, I S M

    2016-08-17

    Beef, buffalo, and pork adulteration in the food chain is an emerging and sensitive issue. Current molecular techniques to authenticate these species depend on polymerase chain reaction (PCR) assays involving long and single targets which break down under natural decomposition and/or processing treatments. This novel multiplex polymerase chain reaction-restriction fragment length polymorphism assay targeted two different gene sites for each of the bovine, buffalo, and porcine materials. This authentication ensured better security, first through a complementation approach because it is highly unlikely that both sites will be missing under compromised states, and second through molecular fingerprints. Mitochondrial cytochrome b and ND5 genes were targeted, and all targets (73, 90, 106, 120, 138, and 146 bp) were stable under extreme boiling and autoclaving treatments. Target specificity and authenticity were ensured through cross-amplification reaction and restriction digestion of PCR products with AluI, EciI, FatI, and CviKI-1 enzymes. A survey of Malaysian frankfurter products revealed rampant substitution of beef with buffalo but purity in porcine materials. PMID:27501408

  19. Innovative techniques for the production of energetic radicals for lunar processing including cold plasma processing of local planetary ores

    NASA Technical Reports Server (NTRS)

    Bullard, D.; Lynch, D. C.

    1992-01-01

    Hydrogen reduction of ilmenite has been studied by a number of investigators as a potential means for recovery of oxygen from lunar soil. Interest in this process has always rested with the simplicity of the flow diagram and the utilization of established technology. Effective utilization of hydrogen in the reduction process at temperatures of 1200 C and below has always been disappointing and, as such, has led other investigators to focus attention on other systems. Effective utilization of hydrogen in the reduction of ilmenite can be significantly enhanced in the presence of a non-equilibrium hydrogen plasma. Ilmenite at solid specimen temperatures of 600 C to 970 C were reacted in a hydrogen plasma. Those experiments revealed that hydrogen utilization can be significantly enhanced. At a specimen temperature of 850 C the fraction of H2 reacted was 24 percent compared to the 7 percent theoretical limit calculated with thermodynamic theory for the same temperature. An added advantage for a hydrogen plasma involves further reduction of TiO2. Reduction of the iron oxide in ilmenite yields TiO2 and metallic iron as by products. Titanium forms a number of oxides including TiO, Ti2O3, Ti3O5 and the Magneli oxides (Ti4O7 to Ti50O99). In conventional processing of ilmenite with hydrogen it is possible to reduce TiO2 to Ti7O13 within approximately an hour, but with poor utilization of hydrogen on the order of one mole of H2 per thousand. In the cold or non-equilibrium plasma TiO2 can be rapidly reduced to Ti2O3 with hydrogen utilization exceeding 10 percent. Based on design considerations of the plasma reactor greater utilization of the hydrogen in the reduction of TiO2 is possible.

  20. 78 FR 48467 - Delphi Automotive Systems, LLC, Products and Service Solutions Division, Including On-Site Leased...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-08

    ... Department's notice of determination was published in the Federal Register on February 22, 2013 (Volume 78 FR... Employment and Training Administration Delphi Automotive Systems, LLC, Products and Service Solutions... workers of Delphi Automotive Systems, LLC, Product and Service Solutions Division, Original...

  1. A novel pathway of direct methane production and emission by eukaryotes including plants, animals and fungi: An overview

    NASA Astrophysics Data System (ADS)

    Liu, Jiangong; Chen, Huai; Zhu, Qiuan; Shen, Yan; Wang, Xue; Wang, Meng; Peng, Changhui

    2015-08-01

    Methane (CH4) is a powerful greenhouse gas with a global warming potential 28 times that of carbon dioxide (CO2). CH4 is responsible for approximately 20% of the Earth's warming since pre-industrial times. Knowledge of the sources of CH4 is crucial due to the recent substantial interannual variability of growth rates and uncertainties regarding individual sources. The prevailing paradigm is that methanogenesis carried out by methanogenic archaea occurs primarily under strictly anaerobic conditions. However, in the past decade, studies have confirmed direct CH4 release from three important kingdoms of eukaryotes-Plantae, Animalia and Fungi-even in the presence of oxygen. This novel CH4 production pathway has been aptly termed "aerobic CH4 production" to distinguish it from the well-known anaerobic CH4 production pathway, which involves catalytic activity by methanogenic archaeal enzymes. In this review, we collated recent experimental evidence from the published literature and documented this novel pathway of direct CH4 production and emission by eukaryotes. The mechanisms involved in this pathway may be related to protective strategies of eukaryotes in response to changing environmental stresses, with CH4 a by-product or end-product during or at the end of the process(es) that originates from organic methyl-type compounds. Based on the existing, albeit uncertain estimates, plants seem to contribute less to the global CH4 budget (3-24%) compared to previous estimates (10-37%). We still lack estimates of CH4 emissions by animals and fungi. Overall, there is an urgent need to identify the precursors for this novel CH4 source and improve our understanding of the mechanisms of direct CH4 production and the impacts of environmental stresses. An estimate of this new CH4 source, which was not considered as a CH4 source by the Intergovernmental Panel on Climate Change (IPCC) (2013), could be useful for better quantitation of the global CH4 budget.

  2. Survey of undeclared egg allergen levels in the most frequently recalled food types (including products bearing precautionary labelling).

    PubMed

    Khuda, Sefat E; Sharma, Girdhari M; Gaines, Dennis; Do, Andrew B; Pereira, Marion; Chang, Michael; Ferguson, Martine; Williams, Kristina M

    2016-08-01

    Since the number of recalls involving undeclared allergens is commonly associated with bakery and snack foods, we aimed to determine the frequency of egg allergens in a large number of these products using two commercial enzyme-linked immunosorbent assay (ELISA) methods. Samples were chosen that either had no egg identified on the product label or which had an egg precautionary statement. Among all samples, egg protein was detected in 5% of products using a Morinaga (MO) kit and 1% of products using a R-Biopharm (RB) kit. For bakery samples, egg protein was detected in 6% of 363 samples with no precautionary labelling (6% by MO and 1% by RB kit) and 12% of 80 samples which had precautionary labelling. For snack samples, egg protein was detected in 2% of 371 samples with no precautionary labelling (2% by MO and < 1% by RB kit) and 5% of 21 samples which had precautionary labelling. The disagreement rates between two methods were 5.2% for bakery products and 2.6% for snack products. The sample repeatability was at an acceptable level for bakery (< 12.5%) and snack foods (< 7.5%) for each method. The relative standard deviation between test kits was high (103.1%) for bakery foods. Four bakery products without precautionary labelling had a higher level of egg protein per serving compared with the eliciting dose (ED10 of 3.7 mg protein) for egg allergic patients. These results highlight the fact that detection methodology plays a vital role for accurate labelling control and mitigation of risk for egg allergic consumers. PMID:27269052

  3. Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes.

    PubMed

    Vujicic-Zagar, Andreja; Pijning, Tjaard; Kralj, Slavko; López, Cesar A; Eeuwema, Wieger; Dijkhuizen, Lubbert; Dijkstra, Bauke W

    2010-12-14

    Glucansucrases are large enzymes belonging to glycoside hydrolase family 70, which catalyze the cleavage of sucrose into fructose and glucose, with the concomitant transfer of the glucose residue to a growing α-glucan polymer. Among others, plaque-forming oral bacteria secrete these enzymes to produce α-glucans, which facilitate the adhesion of the bacteria to the tooth enamel. We determined the crystal structure of a fully active, 1,031-residue fragment encompassing the catalytic and C-terminal domains of GTF180 from Lactobacillus reuteri 180, both in the native state, and in complexes with sucrose and maltose. These structures show that the enzyme has an α-amylase-like (β/α)(8)-barrel catalytic domain that is circularly permuted compared to the catalytic domains of members of glycoside hydrolase families 13 and 77, which belong to the same GH-H superfamily. In contrast to previous suggestions, the enzyme has only one active site and one nucleophilic residue. Surprisingly, in GTF180 the peptide chain follows a "U"-path, such that four of the five domains are made up from discontiguous N- and C-terminal stretches of the peptide chain. Finally, the structures give insight into the factors that determine the different linkage types in the polymeric product. PMID:21118988

  4. Aberrant immunoglobulin synthesis in light chain amyloidosis. Free light chain and light chain fragment production by human bone marrow cells in short-term tissue culture.

    PubMed Central

    Buxbaum, J

    1986-01-01

    Bone marrow cells obtained from 14 patients with light chain amyloid (AL) deposition were examined by biosynthetic labeling techniques. These analyses identified free monoclonal light chain (L-chain) synthesis even in those patients whose serum or urine contained no M protein or free L-chains or only an intact M protein. The experiments also identified a subset of patients whose plasma cells synthesized polypeptides bearing constant region antigenic determinants that migrated more rapidly than intact L-chains on polyacrylamide gels. Since most AL fibrils contain L-chain fragments rather than intact L-chains, these studies suggested that the genesis of the fibril components may reflect aberrant synthesis, proteolytic processing, or both. We also noted that in some individuals the pattern of Ig synthesis normalized after several courses of cytotoxic therapy. Thus, we could use bone marrow Ig synthesis as a sensitive biochemical parameter for monitoring therapy. Finally, the presence of aberrant synthetic products in these clones raised questions about their origin with respect to the normal processes of transcription, translation, and posttranslational modification in Ig-producing cells. Images PMID:3091637

  5. Utility of the Clostridial Site-Specific Recombinase TnpX To Clone Toxic-Product-Encoding Genes and Selectively Remove Genomic DNA Fragments

    PubMed Central

    Adams, Vicki; Bantwal, Radhika; Stevenson, Lauren; Cheung, Jackie K.; Awad, Milena M.; Nicholson, Joel; Carter, Glen P.; Mackin, Kate E.; Rood, Julian I.

    2014-01-01

    TnpX is a site-specific recombinase responsible for the excision and insertion of the transposons Tn4451 and Tn4453 in Clostridium perfringens and Clostridium difficile, respectively. Here, we exploit phenotypic features of TnpX to facilitate genetic mutagenesis and complementation studies. Genetic manipulation of bacteria often relies on the use of antibiotic resistance genes; however, a limited number are available for use in the clostridia. The ability of TnpX to recognize and excise specific DNA fragments was exploited here as the basis of an antibiotic resistance marker recycling system, specifically to remove antibiotic resistance genes from plasmids in Escherichia coli and from marked chromosomal C. perfringens mutants. This methodology enabled the construction of a C. perfringens plc virR double mutant by allowing the removal and subsequent reuse of the same resistance gene to construct a second mutation. Genetic complementation can be challenging when the gene of interest encodes a product toxic to E. coli. We show that TnpX represses expression from its own promoter, PattCI, which can be exploited to facilitate the cloning of recalcitrant genes in E. coli for subsequent expression in the heterologous host C. perfringens. Importantly, this technology expands the repertoire of tools available for the genetic manipulation of the clostridia. PMID:24682304

  6. Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes

    PubMed Central

    Vujičić-Žagar, Andreja; Pijning, Tjaard; Kralj, Slavko; López, Cesar A.; Eeuwema, Wieger; Dijkhuizen, Lubbert; Dijkstra, Bauke W.

    2010-01-01

    Glucansucrases are large enzymes belonging to glycoside hydrolase family 70, which catalyze the cleavage of sucrose into fructose and glucose, with the concomitant transfer of the glucose residue to a growing α-glucan polymer. Among others, plaque-forming oral bacteria secrete these enzymes to produce α-glucans, which facilitate the adhesion of the bacteria to the tooth enamel. We determined the crystal structure of a fully active, 1,031-residue fragment encompassing the catalytic and C-terminal domains of GTF180 from Lactobacillus reuteri 180, both in the native state, and in complexes with sucrose and maltose. These structures show that the enzyme has an α-amylase-like (β/α)8-barrel catalytic domain that is circularly permuted compared to the catalytic domains of members of glycoside hydrolase families 13 and 77, which belong to the same GH-H superfamily. In contrast to previous suggestions, the enzyme has only one active site and one nucleophilic residue. Surprisingly, in GTF180 the peptide chain follows a “U”-path, such that four of the five domains are made up from discontiguous N- and C-terminal stretches of the peptide chain. Finally, the structures give insight into the factors that determine the different linkage types in the polymeric product. PMID:21118988

  7. 75 FR 38127 - Visteon Systems, LLC North Penn Plant Electronics Products Group Including On-Site Leased Workers...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-01

    ..., 2009 (74 FR 2136). The certification was amended on December 29, 2008 to correct the impact date to read December 6, 2008. The notice was published in the Federal Register on January 6, 2009 (74 FR 469... Including On-Site Leased Workers From Ryder Integrated Logistics and Including On-Site Workers From...

  8. 75 FR 28657 - Dell Products LP-Parmer North Location, a Subsidiary of Dell, Inc., Including On-Site Leased...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-21

    ... in the Federal Register on March 5, 2010 (75 FR 10321). The workers are engaged in employment related... Capital, MagRabbit, Manpower and Spherion Corporation; Round Rock, TX; Dell Products LP--Parmer North One... Capital, MagRabbit, Manpower, and Spherion Corporation, Round Rock, Texas (TA-W-72,150) and Dell...

  9. A Human Anti-Toll Like Receptor 4 Fab Fragment Inhibits Lipopolysaccharide-Induced Pro-Inflammatory Cytokines Production in Macrophages

    PubMed Central

    Xu, Jing; Cai, Binggang; Zhang, Yiqing; Zheng, Feng; Zhou, Linfu; Yang, Zhiguo; Zhang, Xin; Wang, Changjun; Nie, Shinan; Zhu, Jin

    2016-01-01

    The results of clinical and experimental studies suggest that endotoxin/toll-like receptor 4 (TLR4)-mediated proinflammatory and profibrotic signaling activation is critical in the development of hepatic fibrosis. However, studies examining the role of specific TLR4 inhibitor are still lacking. The present study was aimed to prepare a human anti-TLR4 Fab fragment, named hTLR4-Fab01, and to explore its immune activity. We screened the positive clone of anti-human TLR4 phagemid from a human phage-display antibody library using recombinant TLR4 protein, which was used as template cDNA for the amplification of variable regions of the heavy (VH) chain and light chain (VL), then coupled with highly conserved regions of the heavy chain domain 1 (CH1) and the light chain (CL), respectively. Thus, the prokaryotic expression vector pETDuet-1 of hTLR4-Fab01 was constructed and transformed into Escherichia coli (E. coli) BL21. The characteristic of hTLR4-Fab01 was examined by SDS-PAGE, Western blotting, ELISA, affinity and kinetics assay. Further, our data demonstrate that hTLR4-Fab01 could specifically bind to TLR4, and its treatment obviously attenuated the proinflammatory effect, characterized by less LPS-induced TNF-α, IL-1, IL-6 and IL-8 production in human macrophages. In conclusion, we have successfully prepared the hTLR4-Fab01 with efficient activity for blocking LPS-induced proinflammatory cytokines production, suggesting that the hTLR4-Fab01 may be a potential candidate for the treatment of hepatic fibrosis. PMID:26785354

  10. Redirecting photosynthetic electron flow into light-driven synthesis of alternative products including high-value bioactive natural compounds.

    PubMed

    Lassen, Lærke Münter; Nielsen, Agnieszka Zygadlo; Ziersen, Bibi; Gnanasekaran, Thiyagarajan; Møller, Birger Lindberg; Jensen, Poul Erik

    2014-01-17

    Photosynthesis in plants, green algae, and cyanobacteria converts solar energy into chemical energy in the form of ATP and NADPH, both of which are used in primary metabolism. However, often more reducing power is generated by the photosystems than what is needed for primary metabolism. In this review, we discuss the development in the research field, focusing on how the photosystems can be used as synthetic biology building blocks to channel excess reducing power into light-driven production of alternative products. Plants synthesize a large number of high-value bioactive natural compounds. Some of the key enzymes catalyzing their biosynthesis are the cytochrome P450s situated in the endoplasmic reticulum. However, bioactive compounds are often synthesized in low quantities in the plants and are difficult to produce by chemical synthesis due to their often complex structures. Through a synthetic biology approach, enzymes with a requirement for reducing equivalents as cofactors, such as the cytochrome P450s, can be coupled directly to the photosynthetic energy output to obtain environmentally friendly production of complex chemical compounds. By relocating cytochrome P450s to the chloroplasts, reducing power can be diverted toward the reactions catalyzed by the cytochrome P450s. This provides a sustainable production method for high-value compounds that potentially can solve the problem of NADPH regeneration, which currently limits the biotechnological uses of cytochrome P450s. We describe the approaches that have been taken to couple enzymes to photosynthesis in vivo and to photosystem I in vitro and the challenges associated with this approach to develop new green production platforms. PMID:24328185

  11. 21 CFR 700.14 - Use of vinyl chloride as an ingredient, including propellant of cosmetic aerosol products.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... inhalation exposure to vinyl chloride. Furthermore, vinyl chloride has recently been linked to liver disease, including liver cancer, in workers engaged in the polymerization of vinyl chloride. It is the view of...

  12. 75 FR 55614 - Dell Products LP, Winston-Salem (WS-1) Division, Including On-Site Leased Workers From Adecco...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-13

    ... Federal Register on April 23, 2010 (75 FR 21361). The notice was amended on March 30, 2010 to include on... Register on April 19, 2010 (75 FR 20385) At the request of the State agency, the Department reviewed...

  13. 75 FR 56564 - Dell Products LP, Winston-Salem (WS-1) Division Including On-Site Leased Workers From Adecco...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-16

    ... Federal Register on April 23, 2010 (75 FR 21361). The notice was amended on March 30, 2010 to include on... Register on April 19, 2010 (75 FR 20385). At the request of the State agency, the Department reviewed...

  14. 21 CFR 700.14 - Use of vinyl chloride as an ingredient, including propellant of cosmetic aerosol products.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... inhalation exposure to vinyl chloride. Furthermore, vinyl chloride has recently been linked to liver disease, including liver cancer, in workers engaged in the polymerization of vinyl chloride. It is the view of...

  15. 21 CFR 700.14 - Use of vinyl chloride as an ingredient, including propellant of cosmetic aerosol products.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... inhalation exposure to vinyl chloride. Furthermore, vinyl chloride has recently been linked to liver disease, including liver cancer, in workers engaged in the polymerization of vinyl chloride. It is the view of...

  16. 21 CFR 700.14 - Use of vinyl chloride as an ingredient, including propellant of cosmetic aerosol products.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... inhalation exposure to vinyl chloride. Furthermore, vinyl chloride has recently been linked to liver disease, including liver cancer, in workers engaged in the polymerization of vinyl chloride. It is the view of...

  17. 21 CFR 700.14 - Use of vinyl chloride as an ingredient, including propellant of cosmetic aerosol products.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... inhalation exposure to vinyl chloride. Furthermore, vinyl chloride has recently been linked to liver disease, including liver cancer, in workers engaged in the polymerization of vinyl chloride. It is the view of...

  18. Energetics of glass fragmentation: Experiments on synthetic and natural glasses

    NASA Astrophysics Data System (ADS)

    Kolzenburg, S.; Russell, J. K.; Kennedy, L. A.

    2013-11-01

    Natural silicate glasses are an essential component of many volcanic rock types including coherent and pyroclastic rocks; they span a wide range of compositions, occur in diverse environments, and form under a variety of pressure-temperature conditions. In subsurface volcanic environments (e.g., conduits and feeders), melts intersect the thermodynamically defined glass transition temperature to form glasses at elevated confining pressures and under differential stresses. We present a series of room temperature experiments designed to explore the fundamental mechanical and fragmentation behavior of natural (obsidian) and synthetic glasses (Pyrex™) under confining pressures of 0.1-100 MPa. In each experiment, glass cores are driven to brittle failure under compressive triaxial stress. Analysis of the load-displacement response curves is used to quantify the storage of energy in samples prior to failure, the (brittle) release of elastic energy at failure, and the residual energy stored in the post-failure material. We then establish a relationship between the energy density within the sample at failure and the grain-size distributions (D-values) of the experimental products. The relationship between D-values and energy density for compressive fragmentation is significantly different from relationships established by previous workers for decompressive fragmentation. Compressive fragmentation is found to have lower fragmentation efficiency than fragmentation through decompression (i.e., a smaller change in D-value with increasing energy density). We further show that the stress storage capacity of natural glasses can be enhanced (approaching synthetic glasses) through heat treatment.

  19. Cephamycins, a new family of beta-lactam antibiotics. I. Production by actinomycetes, including Streptomyces lactamdurans sp. n.

    PubMed

    Stapley, E O; Jackson, M; Hernandez, S; Zimmerman, S B; Currie, S A; Mochales, S; Mata, J M; Woodruff, H B; Hendlin, D

    1972-09-01

    A number of actinomycetes isolated from soil were found to produce one or more members of a new family of antibiotics, the cephamycins, which are structurally related to cephalosporin C. The cephamycins were produced in submerged fermentation in a wide variety of media by one or more of eight different species of Streptomyces, including a newly described species, S. lactamdurans. These antibiotics exhibit antibacterial activity against a broad spectrum of bacteria which includes many that are resistant to the cephalosporins and penicillins. PMID:4790552

  20. 24 CFR 180.525 - Requests for production of documents or things for inspection or other purposes, including...

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... documents or things for inspection or other purposes, including physical and mental examinations. 180.525... physical and mental examinations. (a) Any party may serve on any other party a request to: (1) Produce and... for the objection shall be stated. (d) Upon motion of any party, when the mental or physical...

  1. 24 CFR 180.525 - Requests for production of documents or things for inspection or other purposes, including...

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... documents or things for inspection or other purposes, including physical and mental examinations. 180.525... physical and mental examinations. (a) Any party may serve on any other party a request to: (1) Produce and... for the objection shall be stated. (d) Upon motion of any party, when the mental or physical...

  2. 24 CFR 180.525 - Requests for production of documents or things for inspection or other purposes, including...

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... documents or things for inspection or other purposes, including physical and mental examinations. 180.525... physical and mental examinations. (a) Any party may serve on any other party a request to: (1) Produce and... for the objection shall be stated. (d) Upon motion of any party, when the mental or physical...

  3. 24 CFR 180.525 - Requests for production of documents or things for inspection or other purposes, including...

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... documents or things for inspection or other purposes, including physical and mental examinations. 180.525... physical and mental examinations. (a) Any party may serve on any other party a request to: (1) Produce and... for the objection shall be stated. (d) Upon motion of any party, when the mental or physical...

  4. 24 CFR 180.525 - Requests for production of documents or things for inspection or other purposes, including...

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... documents or things for inspection or other purposes, including physical and mental examinations. 180.525 Section 180.525 Housing and Urban Development Regulations Relating to Housing and Urban Development OFFICE... AND BUSINESS OPPORTUNITY CONSOLIDATED HUD HEARING PROCEDURES FOR CIVIL RIGHTS MATTERS Discovery §...

  5. Augmented generation of protein fragments during wakefulness as the molecular cause of sleep: a hypothesis

    PubMed Central

    Varshavsky, Alexander

    2012-01-01

    Despite extensive understanding of sleep regulation, the molecular-level cause and function of sleep are unknown. I suggest that they originate in individual neurons and stem from increased production of protein fragments during wakefulness. These fragments are transient parts of protein complexes in which the fragments were generated. Neuronal Ca2+ fluxes are higher during wakefulness than during sleep. Subunits of transmembrane channels and other proteins are cleaved by Ca2+-activated calpains and by other nonprocessive proteases, including caspases and secretases. In the proposed concept, termed the fragment generation (FG) hypothesis, sleep is a state during which the production of fragments is decreased (owing to lower Ca2+ transients) while fragment-destroying pathways are upregulated. These changes facilitate the elimination of fragments and the remodeling of protein complexes in which the fragments resided. The FG hypothesis posits that a proteolytic cleavage, which produces two fragments, can have both deleterious effects and fitness-increasing functions. This (previously not considered) dichotomy can explain both the conservation of cleavage sites in proteins and the evolutionary persistence of sleep, because sleep would counteract deleterious aspects of protein fragments. The FG hypothesis leads to new explanations of sleep phenomena, including a longer sleep after sleep deprivation. Studies in the 1970s showed that ethanol-induced sleep in mice can be strikingly prolonged by intracerebroventricular injections of either Ca2+ alone or Ca2+ and its ionophore (Erickson et al., Science 1978;199:1219–1221; Harris, Pharmacol Biochem Behav 1979;10:527–534; Erickson et al., Pharmacol Biochem Behav 1980;12:651–656). These results, which were never interpreted in connection to protein fragments or the function of sleep, may be accounted for by the FG hypothesis about molecular causation of sleep. PMID:22930402

  6. Microbial gardening in the ocean's twilight zone: detritivorous metazoans benefit from fragmenting, rather than ingesting, sinking detritus: fragmentation of refractory detritus by zooplankton beneath the euphotic zone stimulates the harvestable production of labile and nutritious microbial biomass.

    PubMed

    Mayor, Daniel J; Sanders, Richard; Giering, Sarah L C; Anderson, Thomas R

    2014-12-01

    Sinking organic particles transfer ∼10 gigatonnes of carbon into the deep ocean each year, keeping the atmospheric CO2 concentration significantly lower than would otherwise be the case. The exact size of this effect is strongly influenced by biological activity in the ocean's twilight zone (∼50-1,000 m beneath the surface). Recent work suggests that the resident zooplankton fragment, rather than ingest, the majority of encountered organic particles, thereby stimulating bacterial proliferation and the deep-ocean microbial food web. Here we speculate that this apparently counterintuitive behaviour is an example of 'microbial gardening', a strategy that exploits the enzymatic and biosynthetic capabilities of microorganisms to facilitate the 'gardener's' access to a suite of otherwise unavailable compounds that are essential for metazoan life. We demonstrate the potential gains that zooplankton stand to make from microbial gardening using a simple steady state model, and we suggest avenues for future research. PMID:25220362

  7. Fragmentation of hot classical drops

    SciTech Connect

    Vicentini, A.; Jacucci, G.; Pandharipande, V.R.

    1985-05-01

    Time evolution of hot drops of matter containing approx.230 or approx.130 particles is studied by classical molecular dynamics. Initially, the drops have uniform density and a sharp surface. The chosen initial conditions include three values of density and a range of temperatures wide enough to study the phenomena of evaporation, fragmentation, and total vaporization in a unified fashion. The average density and temperature of central matter is measured periodically to obtain trajectories of the evolution in the rho,T plane. These trajectories indicate that the matter expands almost adiabatically until it reaches the region of adiabatic instabilities. Density inhomogeneities develop in this region, but the matter fragments only if the expansion continues to average densities of less than one-fourth the liquid density, otherwise it recondenses into a single blob. The recondensed matter and fragments have very crooked surfaces. If the temperature is high enough, the expanding matter does not enter the region of adiabatic instabilities and totally vaporizes. For initial densities of the order of equilibrium density, matter does not fragment or develop large inhomogeneities in the region enclosed by the isothermal and adiabatic spinodals. Thus it appears unlikely that fragmentation of small drops (nuclei) can be used to study the isothermal critical region of gas-liquid phase transition. A detailed tabulation of the energies and number of monomers, dimers, light, and heavy fragments emitted in each event is presented.

  8. Multiparameter optimization method and enhanced production of secreted recombinant single-chain variable fragment against the HIV-1 P17 protein from Escherichia coli by fed-batch fermentation.

    PubMed

    Paopang, Porntip; Kasinrerk, Watchara; Tayapiwatana, Chatchai; Seesuriyachan, Phisit; Butr-Indr, Bordin

    2016-04-01

    The single-chain fragment variable (scFv) was used to produce a completely functional antigen-binding fragment in bacterial systems. The advancements in antibody engineering have simplified the method of producing Fv fragments and made it more efficient and generally relevant. In a previous study, the scFv anti HIV-1 P17 protein was produced by a batch production system, optimized by the sequential simplex optimization method. This study continued that work in order to enhance secreted scFv production by fed-batch cultivation, which supported high volumetric productivity and provided a large amount of scFvs for diagnostic and therapeutic research. The developments in cell culture media and process parameter settings were required to realize the maximum production of cells. This study investigated the combined optimization methods, Plackett-Burman design (PBD) and sequential simplex optimization, with the aim of optimize feed medium. Fed-batch cultivation with an optimal feeding rate was determined. The result demonstrated that a 20-mL/hr feeding rate of the optimized medium can increase cell growth, total protein production, and scFv anti-p17 activity by 4.43, 1.48, and 6.5 times more than batch cultivation, respectively. The combined optimization method demonstrated novel power tools for the optimization strategy of multiparameter experiments. PMID:25831436

  9. High-level production in Pichia pastoris of an anti-p185HER-2 single-chain antibody fragment using an alternative secretion expression vector.

    PubMed

    Gurkan, Cemal; Symeonides, Stefan N; Ellar, David J

    2004-02-01

    The methylotrophic yeast Pichia pastoris has become a highly popular expression host for the recombinant production of a wide variety of proteins. Initial success with this system was greatly facilitated by the development of versatile expression vectors that were almost exclusively based on the strong, tightly regulated promoter of the P. pastoris major alcohol oxidase gene ( AOX1 ). For example, pIB4 is an Escherichia coli - P. pastoris shuttle vector that also uses the AOX1 promoter to allow intracellular expression of endogenous and foreign genes in the latter organism. Since the eukaryotic advantages of P. pastoris would be best harnessed through the secretory targeting of the recombinant proteins, we modified the pIB4 vector by adding the Saccharomyces cerevisiae alpha-factor secretion signal immediately upstream of its multiple cloning site. Here we describe the construction of this modified vector, pIB4alpha, and its successful use for the high-level expression and secretion of a functional single-chain antibody fragment (scFv), C6.5, which targets p185(HER-2), a cell-surface glycoprotein overexpressed in about 30% of human breast and ovarian cancers. The PCR strategy used for the subcloning of the C6.5 construct into pIB4alpha also introduced a short DNA sequence coding for a C-terminal hexahistidine tag, which allowed subsequent purification of the secreted scFv, by immobilized-metal-affinity chromatography, to a yield of 70 mg x l(-1) of shake-flask culture. In conclusion, our results suggest that the secretion expression vector pIB4alpha not only complements the original pIB4 vector for intracellular expression in P. pastoris, but might also constitute an attractive alternative to the commercially available secretion expression vectors. PMID:12962542

  10. Production and fragmentation of the D sup *0 charm meson in e sup + e sup minus annihilations at radical s = 29 GeV

    SciTech Connect

    Low, H.L.

    1987-01-01

    In this thesis, the neutral vector charm meson D{sup *0} has been studied. The data, corresponding to an integrated luminosity of 300 pb{sup {minus}1}, were collected using the High Resolution Spectrometer (HRS). The HRS is located at the PEP e{sup +}e{sup {minus}} storage ring at the Stanford Linear Accelerator Center. The detector subsystems relevant to the analysis are the seventeen layer drift chamber system and the barrel calorimeter system. Both of these devices are located within a solenoidal magnetic field of 1.62 Tesla. The charged particle momentum resolution is {sigma}{sub p}/p {approx} 6 {times} 10{sup {minus}3}p (p in GeV) for the momentum range used in this analysis. The electromagnetic energy resolution of the barrel shower counter system is {sigma}{sub E}/E {approx} 0.16/{radical}E (E in GeV). The radiative decay of the D{sup {asterisk}0} into a scalar charm meson, D{sup 0}, and a photon, {gamma}, where the D{sup 0} decays into a kaon and a pion (K{sup {minus}} {pi}{sup +}) has been observed. The production cross section in units of the point cross section is 0.63 {plus minus} 0.22 for fractional energy Z {ge} 0.5. This results is compared with the result form the JADE collaboration. The fragmentation function is compared with that of the D{sup *+} meson, also measured with the HRS.

  11. Innovative techniques for the production of energetic radicals for lunar materials processing including photogeneration via concentrated solar energy

    NASA Technical Reports Server (NTRS)

    Osborn, D. E.; Lynch, D. C.; Fazzolari, R.

    1990-01-01

    The Department of Materials Science and Engineering (MSE) is investigating the use of monatomic chlorine produced in a cold plasma to recover oxygen and metallurgically significant metals from lunar materials. Development of techniques for the production of the chlorine radical (and other energetic radicals for these processes) using local planetary resources is a key step for a successful approach. It was demonstrated terrestrially that the use of UV light to energize the photogeneration of OH radicals from ozone or hydrogen peroxide in aqueous solutions can lead to rapid reaction rates for the breakdown of toxic organic compounds in water. A key question is how to use the expanded solar resource at the lunar surface to generate process-useful radicals. This project is aimed at investigating that question.

  12. Charged-current inclusive neutrino cross sections in the superscaling model including quasielastic, pion production and meson-exchange contributions

    NASA Astrophysics Data System (ADS)

    Ivanov, M. V.; Megias, G. D.; González-Jiménez, R.; Moreno, O.; Barbaro, M. B.; Caballero, J. A.; Donnelly, T. W.

    2016-08-01

    Charged current inclusive neutrino-nucleus cross sections are evaluated using the superscaling model for quasielastic scattering and its extension to the pion production region. The contribution of two-particle-two-hole vector meson-exchange current excitations is also considered within a fully relativistic model tested against electron scattering data. The results are compared with the inclusive neutrino-nucleus data from the T2K and SciBooNE experiments. For experiments where < {E}ν > ∼ 0.8 {{GeV}}, the three mechanisms considered in this work provide good agreement with the data. However, when the neutrino energy is larger, effects from beyond the Δ also appear to be playing a role. The results show that processes induced by vector two-body currents play a minor role in the inclusive cross sections at the kinematics considered.

  13. Nuclear fragmentation database for GCR transport code development

    NASA Astrophysics Data System (ADS)

    Zeitlin, C.; Guetersloh, S.; Heilbronn, L.; Miller, J.; Fukumura, A.; Iwata, Y.; Murakami, T.; Sihver, L.

    2010-09-01

    A critical need for NASA is the ability to accurately model the transport of heavy ions in the Galactic Cosmic Rays (GCR) through matter, including spacecraft walls, equipment racks, etc. Nuclear interactions are of great importance in the GCR transport problem, as they can cause fragmentation of the incoming ion into lighter ions. Since the radiation dose delivered by a particle is proportional to the square of (charge/velocity), fragmentation reduces the dose delivered by incident ions. The other mechanism by which dose can be reduced is ionization energy loss, which can lead to some particles stopping in the shielding. This is the conventional notion of shielding, but it is not applicable to human spaceflight since the particles in the GCR tend to be too energetic to be stopped in the relatively thin shielding that is possible within payload mass constraints. Our group has measured a large number of fragmentation cross sections, intended to be used as input to, or for validation of, NASA's radiation transport models. A database containing over 200 charge-changing cross sections and over 2000 fragment production cross sections has been compiled. In this report, we examine in detail the contrast between fragment measurements at large acceptance and small acceptance. We use output from the PHITS Monte Carlo code to test our assumptions using as an example 40Ar data (and simulated data) at a beam energy of 650 MeV/nucleon. We also present preliminary analysis in which isotopic resolution was attained for beryllium fragments produced by beams of 10B and 11B. Future work on the experimental data set will focus on extracting and interpreting production cross sections for light fragments.

  14. Selectable fragmentation warhead

    SciTech Connect

    Bryan, C.S.; Paisley, D.L.; Montoya, N.I.; Stahl, D.B.

    1992-12-31

    This report discusses a selectable fragmentation warhead which is capable of producing a predetermined number of fragments from a metal plate, and accelerating the fragments toward a target. A first explosive located adjacent to the plate is detonated at selected number of points by laser-driven slapper detonators. In one embodiment, a smoother-disk and a second explosive, located adjacent to the first explosive, serve to increase acceleration of the fragments toward a target. The ability to produce a selected number of fragments allows for effective destruction of a chosen target.

  15. Selectable fragmentation warhead

    DOEpatents

    Bryan, Courtney S.; Paisley, Dennis L.; Montoya, Nelson I.; Stahl, David B.

    1993-01-01

    A selectable fragmentation warhead capable of producing a predetermined number of fragments from a metal plate, and accelerating the fragments toward a target. A first explosive located adjacent to the plate is detonated at selected number of points by laser-driven slapper detonators. In one embodiment, a smoother-disk and a second explosive, located adjacent to the first explosive, serve to increase acceleration of the fragments toward a target. The ability to produce a selected number of fragments allows for effective destruction of a chosen target.

  16. Permeable Gas Flow Influences Magma Fragmentation Speed.

    NASA Astrophysics Data System (ADS)

    Richard, D.; Scheu, B.; Spieler, O.; Dingwell, D.

    2008-12-01

    Highly viscous magmas undergo fragmentation in order to produce the pyroclastic deposits that we observe, but the mechanisms involved remain unclear. The overpressure required to initiate fragmentation depends on a number of physical parameters, such as the magma's vesicularity, permeability, tensile strength and textural properties. It is clear that these same parameters control also the speed at which a fragmentation front travels through magma when fragmentation occurs. Recent mathematical models of fragmentation processes consider most of these factors, but permeable gas flow has not yet been included in these models. However, it has been shown that permeable gas flow through a porous rock during a sudden decompression event increases the fragmentation threshold. Fragmentation experiments on natural samples from Bezymianny (Russia), Colima (Mexico), Krakatau (Indonesia) and Augustine (USA) volcanoes confirm these results and suggest in addition that high permeable flow rates may increase the speed of fragmentation. Permeability from the investigated samples ranges from as low as 5 x 10-14 to higher than 9 x 10- 12 m2 and open porosity ranges from 16 % to 48 %. Experiments were performed for each sample series at applied pressures up to 35 MPa. Our results indicate that the rate of increase of fragmentation speed is higher when the permeability is above 10-12 m2. We confirm that it is necessary to include the influence of permeable flow on fragmentation dynamics.

  17. Structures of endothiapepsin-fragment complexes from crystallographic fragment screening using a novel, diverse and affordable 96-compound fragment library.

    PubMed

    Huschmann, Franziska U; Linnik, Janina; Sparta, Karine; Ühlein, Monika; Wang, Xiaojie; Metz, Alexander; Schiebel, Johannes; Heine, Andreas; Klebe, Gerhard; Weiss, Manfred S; Mueller, Uwe

    2016-05-01

    Crystallographic screening of the binding of small organic compounds (termed fragments) to proteins is increasingly important for medicinal chemistry-oriented drug discovery. To enable such experiments in a widespread manner, an affordable 96-compound library has been assembled for fragment screening in both academia and industry. The library is selected from already existing protein-ligand structures and is characterized by a broad ligand diversity, including buffer ingredients, carbohydrates, nucleotides, amino acids, peptide-like fragments and various drug-like organic compounds. When applied to the model protease endothiapepsin in a crystallographic screening experiment, a hit rate of nearly 10% was obtained. In comparison to other fragment libraries and considering that no pre-screening was performed, this hit rate is remarkably high. This demonstrates the general suitability of the selected compounds for an initial fragment-screening campaign. The library composition, experimental considerations and time requirements for a complete crystallographic fragment-screening campaign are discussed as well as the nine fully refined obtained endothiapepsin-fragment structures. While most of the fragments bind close to the catalytic centre of endothiapepsin in poses that have been observed previously, two fragments address new sites on the protein surface. ITC measurements show that the fragments bind to endothiapepsin with millimolar affinity. PMID:27139825

  18. Structural characterization of intact proteins is enhanced by prevalent fragmentation pathways rarely observed for peptides.

    PubMed

    Cobb, Jennifer S; Easterling, Michael L; Agar, Jeffrey N

    2010-06-01

    While collisionally activated dissociation (CAD) pathways for peptides are well characterized, those of intact proteins are not. We systematically assigned CAD product ions of ubiquitin, myoglobin, and bovine serum albumin generated using high-yield, in-source fragmentation. Assignment of >98% of hundreds of product ions implies that the fragmentation pathways described are representative of the major pathways. Protein dissociation mechanisms were found to be modulated by both source declustering potential and precursor ion charge state. Like peptides, higher charge states of proteins fragmented at lower energies next to Pro, via mobile protons, while lower charge states fragmented at higher energies after Asp and Glu, via localized protons. Unlike peptides, however, predominant fragmentation channels of proteins occurred at intermediate charge states via non-canonical mechanisms and produced extensive internal fragmentation. The non-canonical mechanisms include prominent cleavages C-terminal to Pro and Asn, and N-terminal to Ile, Leu, and Ser; these cleavages, along with internal fragments, led to a 45% increase in sequence coverage, improving the specificity of top-down protein identification. Three applications take advantage of the different mechanisms of protein fragmentation. First, modulation of declustering potential selectively fragments different charge states, allowing the source region to be used as the first stage of a low-resolution tandem mass spectrometer, facilitating pseudo-MS(3) of product ions with known parent charge states. Second, development and integration of automated modulation of ion funnel declustering potential allows users access to a particular fragmentation mechanism, yielding facile cleavage on a liquid chromatography timescale. Third, augmentation of a top-down search engine improved protein characterization. PMID:20303285

  19. Universality of fragment shapes

    NASA Astrophysics Data System (ADS)

    Domokos, Gábor; Kun, Ferenc; Sipos, András Árpád; Szabó, Tímea

    2015-03-01

    The shape of fragments generated by the breakup of solids is central to a wide variety of problems ranging from the geomorphic evolution of boulders to the accumulation of space debris orbiting Earth. Although the statistics of the mass of fragments has been found to show a universal scaling behavior, the comprehensive characterization of fragment shapes still remained a fundamental challenge. We performed a thorough experimental study of the problem fragmenting various types of materials by slowly proceeding weathering and by rapid breakup due to explosion and hammering. We demonstrate that the shape of fragments obeys an astonishing universality having the same generic evolution with the fragment size irrespective of materials details and loading conditions. There exists a cutoff size below which fragments have an isotropic shape, however, as the size increases an exponential convergence is obtained to a unique elongated form. We show that a discrete stochastic model of fragmentation reproduces both the size and shape of fragments tuning only a single parameter which strengthens the general validity of the scaling laws. The dependence of the probability of the crack plan orientation on the linear extension of fragments proved to be essential for the shape selection mechanism.

  20. Universality of fragment shapes

    PubMed Central

    Domokos, Gábor; Kun, Ferenc; Sipos, András Árpád; Szabó, Tímea

    2015-01-01

    The shape of fragments generated by the breakup of solids is central to a wide variety of problems ranging from the geomorphic evolution of boulders to the accumulation of space debris orbiting Earth. Although the statistics of the mass of fragments has been found to show a universal scaling behavior, the comprehensive characterization of fragment shapes still remained a fundamental challenge. We performed a thorough experimental study of the problem fragmenting various types of materials by slowly proceeding weathering and by rapid breakup due to explosion and hammering. We demonstrate that the shape of fragments obeys an astonishing universality having the same generic evolution with the fragment size irrespective of materials details and loading conditions. There exists a cutoff size below which fragments have an isotropic shape, however, as the size increases an exponential convergence is obtained to a unique elongated form. We show that a discrete stochastic model of fragmentation reproduces both the size and shape of fragments tuning only a single parameter which strengthens the general validity of the scaling laws. The dependence of the probability of the crack plan orientation on the linear extension of fragments proved to be essential for the shape selection mechanism. PMID:25772300

  1. Universality of fragment shapes.

    PubMed

    Domokos, Gábor; Kun, Ferenc; Sipos, András Árpád; Szabó, Tímea

    2015-01-01

    The shape of fragments generated by the breakup of solids is central to a wide variety of problems ranging from the geomorphic evolution of boulders to the accumulation of space debris orbiting Earth. Although the statistics of the mass of fragments has been found to show a universal scaling behavior, the comprehensive characterization of fragment shapes still remained a fundamental challenge. We performed a thorough experimental study of the problem fragmenting various types of materials by slowly proceeding weathering and by rapid breakup due to explosion and hammering. We demonstrate that the shape of fragments obeys an astonishing universality having the same generic evolution with the fragment size irrespective of materials details and loading conditions. There exists a cutoff size below which fragments have an isotropic shape, however, as the size increases an exponential convergence is obtained to a unique elongated form. We show that a discrete stochastic model of fragmentation reproduces both the size and shape of fragments tuning only a single parameter which strengthens the general validity of the scaling laws. The dependence of the probability of the crack plan orientation on the linear extension of fragments proved to be essential for the shape selection mechanism. PMID:25772300

  2. Studies toward the Total Synthesis of Dihydrolycolucine. Preparation of AB and CEF Ring Fragments

    PubMed Central

    2015-01-01

    A strategy for the synthesis of the lycopodium alkaloid dihydrolycolucine (1) has been investigated. Synthetic routes were developed based on N-acylpyridinium salt chemistry to prepare target fragments 3 and 4 that could ultimately converge to the natural product. Key reactions include IMDA cycloadditions and retro-Mannich ring-openings to form both the AB and the EF ring fragments. The ring C precursor was prepared using pyridine substitution and directed lithiation chemistry. A Suzuki cross-coupling of rings C and EF led to the CEF ring fragment. Initial attempts at closure of the seven-membered D ring were unsuccessful. PMID:24841361

  3. QCD corrections to vector boson pair production in gluon fusion including interference effects with off-shell Higgs at the LHC

    NASA Astrophysics Data System (ADS)

    Caola, Fabrizio; Dowling, Matthew; Melnikov, Kirill; Röntsch, Raoul; Tancredi, Lorenzo

    2016-07-01

    We compute next-to-leading order (NLO) QCD corrections to the production of two massive electroweak bosons in gluon fusion. We consider both the prompt production process gg → V V and the production mediated by an exchange of an s-channel Higgs boson, gg → H ∗ → V V . We include final states with both on- and off-shell vector bosons with leptonic decays. The gluonic production of vector bosons is a loop-induced process, including both massless and massive quarks in the loop. For gg → ZZ production, we obtain the NLO QCD corrections to the massive loops through an expansion around the heavy top limit. This approximation is valid below the top production threshold, giving a broad range of invariant masses between the Higgs production and the top production thresholds in which our results are valid. We explore the NLO QCD effects in gg → ZZ focusing, in particular, on the interference between prompt and Higgs-mediated processes. We find that the QCD corrections to the interference are large and similar in size to the corrections to both the signal and the background processes. At the same time, we observe that corrections to the interference change rapidly with the four-lepton invariant mass in the region around the ZZ production threshold. We also study the interference effects in gg → W + W - production where, due to technical limitations, we only consider contributions of massless loops. We find that the QCD corrections to the interference in this case are somewhat larger than those for either the signal or the background.

  4. Hydrogen peroxide-induced production of a 40 kDa immunoreactive thyroglobulin fragment in human thyroid cells: the onset of thyroid autoimmunity?

    PubMed Central

    Duthoit, C; Estienne, V; Giraud, A; Durand-Gorde, J M; Rasmussen, A K; Feldt-Rasmussen, U; Carayon, P; Ruf, J

    2001-01-01

    We recently reported that, during in vitro thyroid-hormone synthesis, H(2)O(2) stress cleaved thyroglobulin (Tg) into C-terminal peptides. These peptides were found to contain the immunodominant region of Tg recognized by Tg autoantibodies from patients with an autoimmune thyroid disease. To test the hypothesis that Tg fragmentation is an early upstream initiating event involved in Tg autoimmune response and the consequence of oxidative injuries, we studied the effect of H(2)O(2) stress on human thyroid cells. In culture conditions allowing Tg synthesis and iodine organification by the cells, we found that bolus addition of increasing millimolar doses of H(2)O(2) induced a dose-response appearance of floating cells in the culture medium. These cells apparently resulted from a necrotic process, and they bore iodinated Tg fragments. These fragments were found to be similar to those previously obtained in vitro from purified Tg. In both cases, Tg peptides were recognized by a well-defined monoclonal antibody directed to the immunodominant region of Tg. The smallest immunoreactive Tg peptide had a molecular mass of 40 kDa and entered human thyrocytes more efficiently than the entire Tg. These data suggest that thyrocytes exposed to locally increased H(2)O(2) doses accumulate fragmented Tg for further delivery into surrounding living thyrocytes in the course of an autoimmune response. PMID:11736644

  5. Selective Production of Electrostatically-Bound Adducts of Alkyl Cations/Polyoxoanions by the Collision-Induced Fragmentations of Their Quaternary Ammonium Counterparts

    NASA Astrophysics Data System (ADS)

    Cao, Jie; Xu, Chong; Fan, YanXuan; Fan, LinYuan; Zhang, XiuHui; Hu, ChangWen

    2013-06-01

    Solutions of the quaternary ammonium salts of a set of classic polyoxometalates (POMs) (Keggin [XM12O40]n-, Dawson [P2W18O62]6-, and Lindqvist [M6O19]2- (X = P, Si; M = W, Mo) were characterized by electrospray mass spectrometry. The gas-phase fragmentations of a series of quaternary ammonium-associated clusters were investigated by their collision-induced dissociations to elucidate their fragmentation mechanisms. It was found that the quaternary ammonium-associated clusters had distinctive dissociation characteristics. Moreover, the mono-quaternary ammonium-associated clusters, {NR4[POMs]}(n-1)-, shared a common fragmentation feature, that is, they decomposed exclusively into their respective alkyl cation-bound clusters irrespective of the different cation sizes and the different natures of the polyoxoanions. The optimized geometries and the binding energies of the mono cation-bound Lindqvist POM-based clusters were obtained by calculations. To the best of our knowledge, this is the first investigation of the gas-phase fragmentations of these noncovalent complexes between organic amines and inorganic POM anions by a combination of theory and mass spectrometry.

  6. HZEFRG1 - SEMIEMPIRICAL NUCLEAR FRAGMENTATION MODEL

    NASA Technical Reports Server (NTRS)

    Townsend, L. W.

    1994-01-01

    The high charge and energy (HZE), Semiempirical Nuclear Fragmentation Model, HZEFRG1, was developed to provide a computationally efficient, user-friendly, physics-based program package for generating nuclear fragmentation databases. These databases can then be used in radiation transport applications such as space radiation shielding and dosimetry, cancer therapy with laboratory heavy ion beams, and simulation studies of detector design in nuclear physics experiments. The program provides individual element and isotope production cross sections for the breakup of high energy heavy ions by the combined nuclear and Coulomb fields of the interacting nuclei. The nuclear breakup contributions are estimated using an energy-dependent abrasion-ablation model of heavy ion fragmentation. The abrasion step involves removal of nucleons by direct knockout in the overlap region of the colliding nuclei. The abrasions are treated on a geometric basis and uniform spherical nuclear density distributions are assumed. Actual experimental nuclear radii obtained from tabulations of electron scattering data are incorporated. Nuclear transparency effects are included by using an energy-dependent, impact-parameter-dependent average transmission factor for the projectile and target nuclei, which accounts for the finite mean free path of nucleons in nuclear matter. The ablation step, as implemented by Bowman, Swiatecki, and Tsang (LBL report no. LBL-2908, July 1973), was treated as a single-nucleon emission for every 10 MeV of excitation energy. Fragmentation contributions from electromagnetic dissociation (EMD) processes, arising from the interacting Coulomb fields, are estimated by using the Weiszacker-Williams theory, extended to include electric dipole and electric quadrupole contributions to one-nucleon removal cross sections. HZEFRG1 consists of a main program, seven function subprograms, and thirteen subroutines. Each is fully commented and begins with a brief description of its

  7. Electromagnetic Dissociation Cross Sections for High LET Fragments

    NASA Technical Reports Server (NTRS)

    Norbury, John

    2016-01-01

    Nuclear interaction cross sections are used in space radiation transport codes to calculate the probability of fragment emission in high energy nucleus-nucleus collisions. Strong interactions usually dominate in these collisions, but electromagnetic (EM) interactions can also sometimes be important. Strong interactions typically occur when the projectile nucleus hits a target nucleus, with a small impact parameter. For impact parameters larger than the sum of the nuclear radii, EM reactions dominate and the process is called electromagnetic dissociation (EMD) if one of the nuclei undergo fragmentation. Previous models of EMD have been used to calculate single proton (p) production, single neutron (n) production or light ion production, where a light ion is defined as an isotope of hydrogen (H) or helium (He), such as a deuteron (2H), a triton (3H), a helion (3He) or an alpha particle (4He). A new model is described which can also account for multiple nucleon production, such as 2p, 2n, 1p1n, 2p1n, 2p2n, etc. in addition to light ion production. Such processes are important to include for the following reasons. Consider, for example, the EMD reaction 56Fe + Al --> 52Cr + X + Al, for a 56Fe projectile impacting Al, which produces the high linear energy transfer (LET) fragment 52Cr. In this reaction, the most probable particles representing X are either 2p2n or 4He. Therefore, production of the high LET fragment 52Cr, must include the multiple nucleon production of 2p2n in addition to the light ion production of 4He. Previous models, such as the NUCFRG3 model, could only account for the 4He production process in this reaction and could not account for 2p2n. The new EMD model presented in this work accounts for both the light ion and multiple nucleon processes, and is therefore able to correctly account for the production of high LET products such as 52Cr. The model will be described and calculations will be presented that show the importance of light ion and multiple

  8. Fragmentation properties of metals

    SciTech Connect

    Grady, D.E.; Kipp, M.E.

    1996-06-01

    In the present study we are developing an experimental fracture material property test method specific to dynamic fragmentation. Spherical test samples of the metals of interest are subjected to controlled impulsive stress loads by acceleration to high velocities with a light-gas launcher facility and subsequent normal impact on thin plates. Motion, deformation and fragmentation of the test samples are diagnosed with multiple flash radiography methods. The impact plate materials are selected to be transparent to the x-ray method so that only test metal material is imaged. Through a systematic series of such tests, both strain-to-failure and fragmentation resistance properties are determined through this experimental method. Fragmentation property data for several steels, copper, aluminum, tantalum and titanium have been obtained to date. Aspects of the dynamic data have been analyzed with computational methods to achieve a better understanding of the processes leading to failure and fragmentation, and to test an existing computational fragmentation model.

  9. Total Synthesis of Laulimalide: Assembly of the Fragments and Completion of the Synthesis of the Natural Product and a Potent Analogue

    PubMed Central

    Trost, Barry M.; Amans, Dominique; Seganish, W. Michael; Chung, Cheol K.

    2012-01-01

    In this manuscript, we report the full account of our efforts to couple the northern and the southern building blocks, whose synthesis were described in the preceding paper, along with the modifications required which ultimately lead to a successful synthesis of laulimalide. Key highlights include an exceptionally efficient and atom-economical intramolecular ruthenium-catalyzed alkene-alkyne coupling to build the macrocycle followed by a highly stereoselective 1,3-allylic isomerization promoted by a rhenium complex. Interestingly, the designed synthetic route also allowed us to prepare an analogue of the natural product that possesses significant cytotoxic activity. We also report in this paper a second generation route which provided a more concise synthesis of the natural product. PMID:22307856

  10. Fragments and Coherence

    ERIC Educational Resources Information Center

    Watson, Anne

    2008-01-01

    Can teachers contact the inner coherence of mathematics while working in a context fragmented by always-new objectives, criteria, and initiatives? How, more importantly, can learners experience the inner coherence of mathematics while working in a context fragmented by testing, modular curricular, short-term learning objectives, and lessons that…