Science.gov

Sample records for freshwater cyanobacterial species

  1. Solid-phase/supercritical-fluid extraction for liquid chromatography of phenolic compounds in freshwater microalgae and selected cyanobacterial species.

    PubMed

    Klejdus, B; Kopecký, J; Benesová, L; Vacek, J

    2009-01-30

    In the present paper a new extraction technique based on the combination of solid-phase/supercritical-fluid extraction (SPE/SFE) with subsequent reversed-phase HPLC is described. The SPE/SFE extractor was originally constructed from SPE-cartridge incorporated into the SFE extraction cell. Selected groups of benzoic acid derivatives (p-hydroxybenzoic, protocatechuic, gallic, vanillic and syringic acid), hydroxybenzaldehydes (4-hydroxybenzaldehyde and 3,4-dihydroxybenzaldehyde) and cinnamic acid derivatives (o-coumaric, p-coumaric, caffeic, ferulic, sinapic and chlorogenic acid) were extracted. Cyclic addition of binary extraction solvent system based on methanol:water (1:1, v/v) and methanol/ammonia aqueous solution was used for extraction at 40MPa and 80 degrees C. The p-hydroxybenzoic, protocatechuic, vanillic, syringic, caffeic and chlorogenic acid; 4-hydroxybenzaldehyde and 3,4-dihydroxybenzaldehyde were identified by HPLC-electrospray mass spectrometry in SPE/SFE extracts of acid hydrolyzates of microalga (Spongiochloris spongiosa) and cyanobacterial strains (Spirulina platensis, Anabaena doliolum, Nostoc sp., and Cylindrospermum sp.). For the identification and quantification of the compounds the quasi-molecular ions [M-H](-) and specific fragments were analysed by quadrupole mass spectrometry analyzer. Our analysis showed that the microalgae and cyanobacteria usually contained phenolic acids or aldehydes at microg levels per gram of lyophilized sample. The proposed SPE/SFE extraction method would be useful for the analysis of different plant species containing trace amount of polar fraction of phenols. PMID:19111311

  2. Microbial communities reflect temporal changes in cyanobacterial composition in a shallow ephemeral freshwater lake.

    PubMed

    Woodhouse, Jason Nicholas; Kinsela, Andrew Stephen; Collins, Richard Nicholas; Bowling, Lee Chester; Honeyman, Gordon L; Holliday, Jon K; Neilan, Brett Anthony

    2016-06-01

    The frequency of freshwater cyanobacterial blooms is at risk of increasing as a consequence of climate change and eutrophication of waterways. It is increasingly apparent that abiotic data are insufficient to explain variability within the cyanobacterial community, with biotic factors such as heterotrophic bacterioplankton, viruses and protists emerging as critical drivers. During the Australian summer of 2012-2013, a bloom that occurred in a shallow ephemeral lake over a 6-month period was comprised of 22 distinct cyanobacteria, including Microcystis, Dolichospermum, Oscillatoria and Sphaerospermopsis. Cyanobacterial cell densities, bacterial community composition and abiotic parameters were assessed over this period. Alpha-diversity indices and multivariate analysis were successful at differentiating three distinct bloom phases and the contribution of abiotic parameters to each. Network analysis, assessing correlations between biotic and abiotic variables, reproduced these phases and assessed the relative importance of both abiotic and biotic factors. Variables possessing elevated betweeness centrality included temperature, sodium and operational taxonomic units belonging to the phyla Verrucomicrobia, Planctomyces, Bacteroidetes and Actinobacteria. Species-specific associations between cyanobacteria and bacterioplankton, including the free-living Actinobacteria acI, Bacteroidetes, Betaproteobacteria and Verrucomicrobia, were also identified. We concluded that changes in the abundance and nature of freshwater cyanobacteria are associated with changes in the diversity and composition of lake bacterioplankton. Given this, an increase in the frequency of cyanobacteria blooms has the potential to alter nutrient cycling and contribute to long-term functional perturbation of freshwater systems. PMID:26636552

  3. The fate of the cyanobacterial toxin β-N-methylamino-L-alanine in freshwater mussels.

    PubMed

    Downing, Simoné; Contardo-Jara, Valeska; Pflugmacher, Stephan; Downing, Timothy Grant

    2014-03-01

    The cyanobacterial neurotoxin, β-N-methylamino-l-alanine (BMAA) has been suggested as a causative agent for certain neurodegenerative diseases. This cyanotoxin bioaccumulates in an array of aquatic organisms, in which it occurs as both a free amino acid and in a protein-associated form. This study was intended to investigate the environmental fate of BMAA by examining the metabolism of isotopically labeled BMAA in four freshwater mussel species. All species showed substantial uptake of BMAA from the culture media. Data showed no significant evidence for BMAA catabolism in any of the animals but did suggest metabolism via the reversible covalent modification of BMAA in freshwater mussels, a process that appears to be variable in different species. PMID:24507126

  4. Occurrence of toxigenic cyanobacterial blooms in freshwaters of Sri Lanka.

    PubMed

    Jayatissa, L P; Silva, E I L; McElhiney, J; Lawton, L A

    2006-03-01

    A previous pioneering study of freshwater bodies in Sri Lanka revealed the presence of toxic cyanobacteria in three out of four water bodies tested. It was therefore important to perform a more detailed investigation into the presence of cyanobacteria and their toxins throughout Sri Lanka. The country has a long history of well-planned water management with the agricultural economy and drinking water supply still dependent on thousands of man-made tanks. Seventeen reservoirs from different user categories and different climatic zones were selected to study variations in phytoplankton communities with relation to major nutrients, with particular emphasis on cyanobacteria. The study was carried out during a two-year period and heavy growths or blooms of cyanobacteria observed during the study period were tested for microcystins. The results clearly categorised the 17 reservoirs into four groups parallel to the classification based on the user categories of water bodies. Biomass of total phytoplankton, the abundance of cyanobacteria, the dominance of Microcystis spp. and concentration of nitrate (N) and total phosphorous (P) were the lowest in drinking water bodies and the highest in aesthetic water bodies. Irrigation water bodies showed the second lowest values for phytoplankton biomass, and concentration of N and P, while hydropower reservoirs showed the second highest values for the same parameters. The fraction of cyanobacteria in irrigation waters was higher than that in hydropower reservoirs, but surprisingly the dominance of Microcystis spp. was reversed. Possible reasons for these variations are discussed. More than half of the bloom material tested contained microcystins up to 81microgl(-1). Our findings indicate the potential for high-risk situations due to toxigenic cyanobacterial blooms in susceptible freshwaters of Sri Lanka. PMID:16464697

  5. Screening of Cyanobacterial Species for Calcification

    SciTech Connect

    Brady D. Lee; William A. Apel; Michelle R. Walton

    2004-07-01

    Species of cyanobacteria in the genera Synechococcus and Synechocystis are known to be the catalysts of a phenomenon called "whitings", which is the formation and precipitation of fine-grained CaCO3 particles. Whitings occur when the cyanobacteria fix atmospheric CO2 through the formation of CaCO3 on their cell surfaces, which leads to precipitation to the ocean floor and subsequent entombment in mud. Whitings represent one potential mechanism for CO2 sequestration. Research was performed to determine the ability of various strains of Synechocystis and Synechococcus to calcify when grown in microcosms amended with 2.5 mM HCO3- and 3.4 mM Ca2+. Results indicated that although all strains tested have the ability to calcify, only two Synechococcus species, strains PCC 8806 and PCC 8807, were able to calcify to the extent that a CaCO3 precipitate was formed. Enumeration of the cyanobacterial cultures during testing indicated that cell density did not appear to have a direct effect on calcification. Factors that had the greatest effect on calcification were CO2 removal and subsequent generation of alkaline pH. Whereas cell density was similar for all strains tested, differences in maximum pH were demonstrated. As CO2 was removed, growth medium pH increased and soluble Ca2+ was removed from solution. The largest increases in growth medium pH occurred when CO2 levels dropped below 400 ppmv. Research presented demonstrates that, under the conditions tested, many species of cyanobacteria in the genera Synechocystis and Synechococcus are able to calcify but only two species of Synechococcus were able to calcify to an extent that led to the precipitation of calcium carbonate.

  6. Sporadic Distribution and Distinctive Variations of Cylindrospermopsin Genes in Cyanobacterial Strains and Environmental Samples from Chinese Freshwater Bodies

    PubMed Central

    Jiang, Yongguang; Xiao, Peng; Yu, Gongliang; Shao, Jihai; Liu, Deming; Azevedo, Sandra M. F. O.

    2014-01-01

    Increasing reports of cylindrospermopsins (CYNs) in freshwater ecosystems have promoted the demand for identifying all of the potential CYN-producing cyanobacterial species. The present study explored the phylogenetic distribution and evolution of cyr genes in cyanobacterial strains and water samples from China. Four Cylindrospermopsis strains and two Raphidiopsis strains were confirmed to produce CYNs. Mutant cyrI and cyrK genes were observed in these strains. Cloned cyr gene sequences from eight water bodies were clustered with cyr genes from Cylindrospermopsis and Raphidiopsis (C/R group) in the phylogenetic trees with high similarities (99%). Four cyrI sequence types and three cyrJ sequence types were observed to have different sequence insertions and repeats. Phylogenetic analysis of the rpoC1 sequences of the C/R group revealed four conserved clades, namely, clade I, clade II, clade III, and clade V. High sequence similarities (>97%) in each clade and a divergent clade IV were observed. Therefore, CYN producers were sporadically distributed in congeneric and paraphyletic C/R group species in Chinese freshwater ecosystems. In the evolution of cyr genes, intragenomic translocations and intergenomic transfer between local Cylindrospermopsis and Raphidiopsis were emphasized and probably mediated by transposases. This research confirms the existence of CYN-producing Cylindrospermopsis in China and reveals the distinctive variations of cyr genes. PMID:24928879

  7. Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

    PubMed Central

    Louati, Imen; Pascault, Noémie; Debroas, Didier; Bernard, Cécile; Humbert, Jean-François; Leloup, Julie

    2015-01-01

    The factors and processes driving cyanobacterial blooms in eutrophic freshwater ecosystems have been extensively studied in the past decade. A growing number of these studies concern the direct or indirect interactions between cyanobacteria and heterotrophic bacteria. The presence of bacteria that are directly attached or immediately adjacent to cyanobacterial cells suggests that intense nutrient exchanges occur between these microorganisms. In order to determine if there is a specific association between cyanobacteria and bacteria, we compared the bacterial community composition during two cyanobacteria blooms of Anabaena (filamentous and N2-fixing) and Microcystis (colonial and non-N2 fixing) that occurred successively within the same lake. Using high-throughput sequencing, we revealed a clear distinction between associated and free-living communities and between cyanobacterial genera. The interactions between cyanobacteria and bacteria appeared to be based on dissolved organic matter degradation and on N recycling, both for N2-fixing and non N2-fixing cyanobacteria. Thus, the genus and potentially the species of cyanobacteria and its metabolic capacities appeared to select for the bacterial community in the phycosphere. PMID:26579722

  8. Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus.

    PubMed

    Louati, Imen; Pascault, Noémie; Debroas, Didier; Bernard, Cécile; Humbert, Jean-François; Leloup, Julie

    2015-01-01

    The factors and processes driving cyanobacterial blooms in eutrophic freshwater ecosystems have been extensively studied in the past decade. A growing number of these studies concern the direct or indirect interactions between cyanobacteria and heterotrophic bacteria. The presence of bacteria that are directly attached or immediately adjacent to cyanobacterial cells suggests that intense nutrient exchanges occur between these microorganisms. In order to determine if there is a specific association between cyanobacteria and bacteria, we compared the bacterial community composition during two cyanobacteria blooms of Anabaena (filamentous and N2-fixing) and Microcystis (colonial and non-N2 fixing) that occurred successively within the same lake. Using high-throughput sequencing, we revealed a clear distinction between associated and free-living communities and between cyanobacterial genera. The interactions between cyanobacteria and bacteria appeared to be based on dissolved organic matter degradation and on N recycling, both for N2-fixing and non N2-fixing cyanobacteria. Thus, the genus and potentially the species of cyanobacteria and its metabolic capacities appeared to select for the bacterial community in the phycosphere. PMID:26579722

  9. Cyanobacterial tufa calcification in two freshwater streams: ambient environment, chemical thresholds and biological processes

    NASA Astrophysics Data System (ADS)

    Merz-Preiß, Martina; Riding, Robert

    1999-07-01

    Calcareous freshwater streams near Bad Urach, southwest Germany, were studied to determine the environmental limits to cyanobacterial calcification. Daily variations in temperature, pH, calcium concentration, and alkalinity were measured at seasonal intervals from September 1993 to January 1995 in two small woodland streams with lengths of 1.0 and 1.5 km. The principal cause of supersaturation in these fast-flowing streams is inorganic carbon dioxide outgassing from resurging groundwater, locally enhanced by turbulence at waterfalls and cascades. Photosynthetic uptake of carbon dioxide and temperature effects are negligible. Nonetheless, organic substrates, particularly cyanobacteria-dominated microbial mats and biofilm, significantly localize precipitation by providing suitable nucleation sites. Precipitation rates on artificial substrates, up to 2.2 mm/yr on limestone, correlate with high Saturation Index values. Copper substrates inhibited microbial colonization and received negligible encrustation. Tufa formation and external calcium carbonate encrustation of cyanobacteria are conspicuous where the annual WATEQ4F Saturation Index exceeds 0.8, and are slightly below 0.7. Calcium carbonate impregnation of cyanobacterial sheaths has not been observed. We infer that in these fast-flowing streams cyanobacteria utilize CO 2 in photosynthesis whereas elsewhere, in sluggish freshwater, cyanobacteria utilize HCO 3-, leading to sheath impregnation by calcium carbonate even where Saturation Index is only 0.2-0.3. Thus, photosynthetic influence on cyanobacterial calcification appears to be negligible in fast-flowing CO 2-rich streams and cyanobacterial calcification takes the form of external encrustation. In slow-flowing CO 2-poor streams and lakes cyanobacteria preferentially utilize bicarbonate and sheath impregnation can result. Modern tropical marine carbonate shelves have saturation indices commonly in the range 0.62-0.82 and cyanobacterial calcification is

  10. Investigation on extracellular polymeric substances from mucilaginous cyanobacterial blooms in eutrophic freshwater lakes.

    PubMed

    Xu, Huacheng; Yu, Guanghui; Jiang, Helong

    2013-09-01

    Enhanced knowledge on extracellular polymeric substances (EPSs) of mucilaginous cyanobacterial blooms could improve our understanding of its ecological significance. This study for the first time investigated the extraction and fractionation of EPS matrix from cyanobacterial blooms in a eutrophic freshwater lake, and the changes in chemical compositions in EPS matrix during extraction were systematically investigated by two-dimensional correlation spectroscopy (2D-COS). The analyses demonstrated that organic matters were unevenly distributed among the EPS matrix, with most of organic matters being tightly bound to cyanobacterial cells. In addition, the soluble and loosely bound EPS fractions mainly consisted of proteins, while polysaccharides became the predominant compounds in the tightly bound EPS fraction. Heating extraction at 60°C for 30min led to a high EPS yield and low cell lysis when compared with other extraction methods. The 2D-COS results revealed a preferential release of OH in polysaccharides versus amide I in proteins in the initial heating; whereas further extension of heating resulted in EPS degradation, with degradation rates arranging in a decreased order from amide I, amide II, polysaccharides-like substances to polysaccharides. These results obtained would help enhance our insights into EPS characterization from cyanobacterial blooms in eutrophic lakes. PMID:23726883

  11. Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom

    PubMed Central

    Penn, Kevin; Wang, Jia; Fernando, Samodha C; Thompson, Janelle R

    2014-01-01

    Cyanobacterial harmful algal blooms (cyanoHABs) appear to be increasing in frequency on a global scale. The Cyanobacteria in blooms can produce toxic secondary metabolites that make freshwater dangerous for drinking and recreation. To characterize microbial activities in a cyanoHAB, transcripts from a eutrophic freshwater reservoir in Singapore were sequenced for six samples collected over one day-night period. Transcripts from the Cyanobacterium Microcystis dominated all samples and were accompanied by at least 533 genera primarily from the Cyanobacteria, Proteobacteria, Bacteroidetes and Actinobacteria. Within the Microcystis population, abundant transcripts were from genes for buoyancy, photosynthesis and synthesis of the toxin microviridin, suggesting that these are necessary for competitive dominance in the Reservoir. During the day, Microcystis transcripts were enriched in photosynthesis and energy metabolism while at night enriched pathways included DNA replication and repair and toxin biosynthesis. Microcystis was the dominant source of transcripts from polyketide and non-ribosomal peptide synthase (PKS and NRPS, respectively) gene clusters. Unexpectedly, expression of all PKS/NRPS gene clusters, including for the toxins microcystin and aeruginosin, occurred throughout the day-night cycle. The most highly expressed PKS/NRPS gene cluster from Microcystis is not associated with any known product. The four most abundant phyla in the reservoir were enriched in different functions, including photosynthesis (Cyanobacteria), breakdown of complex organic molecules (Proteobacteria), glycan metabolism (Bacteroidetes) and breakdown of plant carbohydrates, such as cellobiose (Actinobacteria). These results provide the first estimate of secondary metabolite gene expression, functional partitioning and functional interplay in a freshwater cyanoHAB. PMID:24646695

  12. Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom.

    PubMed

    Penn, Kevin; Wang, Jia; Fernando, Samodha C; Thompson, Janelle R

    2014-09-01

    Cyanobacterial harmful algal blooms (cyanoHABs) appear to be increasing in frequency on a global scale. The Cyanobacteria in blooms can produce toxic secondary metabolites that make freshwater dangerous for drinking and recreation. To characterize microbial activities in a cyanoHAB, transcripts from a eutrophic freshwater reservoir in Singapore were sequenced for six samples collected over one day-night period. Transcripts from the Cyanobacterium Microcystis dominated all samples and were accompanied by at least 533 genera primarily from the Cyanobacteria, Proteobacteria, Bacteroidetes and Actinobacteria. Within the Microcystis population, abundant transcripts were from genes for buoyancy, photosynthesis and synthesis of the toxin microviridin, suggesting that these are necessary for competitive dominance in the Reservoir. During the day, Microcystis transcripts were enriched in photosynthesis and energy metabolism while at night enriched pathways included DNA replication and repair and toxin biosynthesis. Microcystis was the dominant source of transcripts from polyketide and non-ribosomal peptide synthase (PKS and NRPS, respectively) gene clusters. Unexpectedly, expression of all PKS/NRPS gene clusters, including for the toxins microcystin and aeruginosin, occurred throughout the day-night cycle. The most highly expressed PKS/NRPS gene cluster from Microcystis is not associated with any known product. The four most abundant phyla in the reservoir were enriched in different functions, including photosynthesis (Cyanobacteria), breakdown of complex organic molecules (Proteobacteria), glycan metabolism (Bacteroidetes) and breakdown of plant carbohydrates, such as cellobiose (Actinobacteria). These results provide the first estimate of secondary metabolite gene expression, functional partitioning and functional interplay in a freshwater cyanoHAB. PMID:24646695

  13. NATIVE FRESHWATER FISH AND MUSSEL SPECIES RICHNESS

    EPA Science Inventory

    These data represent predicted current distributions of all native freshwater fish and freshwater mussels in the Middle-Atlantic region. The data are available for both 8-digit HUCs and EMAP hexagons and represent total species counts for each spatial unit.

  14. Cyanobacterial Toxic and Bioactive Peptides in Freshwater Bodies of Greece: Concentrations, Occurrence Patterns, and Implications for Human Health

    PubMed Central

    Gkelis, Spyros; Lanaras, Thomas; Sivonen, Kaarina

    2015-01-01

    Cyanobacterial harmful algal blooms represent one of the most conspicuous waterborne microbial hazards in aquatic environments mostly due to the production of toxic secondary metabolites, mainly microcystins (MCs). Other bioactive peptides are frequently found in cyanobacterial blooms, yet their concentration and ecological relevance is still unknown. In this paper we studied the presence and concentration of cyanobacterial peptides (microcystins, anabaenopeptins, anabaenopeptilides) in 36 Greek freshwater bodies, using HPLC-DAD, ELISA, and PP1IA. Microcystins were found in more than 90% of the samples investigated, indicating that microcystin-producing strains seem to also occur in lakes without blooms. Microcystins MC-RR, MC-LR, and MC-YR were the main toxin constituents of the bloom samples. Anabaenopeptin A and B were predominant in some samples, whereas anabaenopeptolide 90A was the only peptide found in Lake Mikri Prespa. The intracellular concentrations of anabaenopeptins produced by cyanobacterial bloom populations are determined for the first time in this study; the high (>1000 µg·L−1) anabaenopeptin concentration found indicates there may be some impacts, at least on the ecology and the food web structure of the aquatic ecosystems. The maximum intracellular MC values measured in Lakes Kastoria and Pamvotis, exceeding 10,000 µg·L−1, are among the highest reported. PMID:26473888

  15. UV-induced photochemical heterogeneity of dissolved and attached organic matter associated with cyanobacterial blooms in a eutrophic freshwater lake.

    PubMed

    Xu, Huacheng; Jiang, Helong

    2013-11-01

    Cyanobacterial blooms represent a significant ecological and human health problem worldwide. In aquatic environments, cyanobacterial blooms are actually surrounded by dissolved organic matter (DOM) and attached organic matter (AOM) that bind with algal cells. In this study, DOM and AOM fractionated from blooming cyanobacteria in a eutrophic freshwater lake (Lake Taihu, China) were irradiated with a polychromatic UV lamp, and the photochemical heterogeneity was investigated using fluorescence excitation-emission matrix (EEM)-parallel factor (PARAFAC) analysis and synchronous fluorescence (SF)-two dimensional correlation spectroscopy (2DCOS). It was shown that a 6-day UV irradiation caused more pronounced mineralization for DOM than AOM (59.7% vs. 41.9%). The EEM-PARAFAC analysis identified one tyrosine-, one humic-, and two tryptophan-like components in both DOM and AOM, and high component photodegradation rates were observed for DOM versus AOM (k > 0.554 vs. <0.519). Moreover, SF-2DCOS found that the photodegradation of organic matters followed the sequence of tyrosine-like > humic-like > tryptophan-like substances. Humic-like substances promoted the indirect photochemical reactions, and were responsible for the higher photochemical rate for DOM. The lower photodegradation of AOM benefited the integrality of cells in cyanobacterial blooms against the negative impact of UV irradiation. Therefore, the photochemical behavior of organic matter was related to the adaptation of enhanced-duration cyanobacterial blooms in aquatic environments. PMID:24041526

  16. Cyanobacterial Toxic and Bioactive Peptides in Freshwater Bodies of Greece: Concentrations, Occurrence Patterns, and Implications for Human Health.

    PubMed

    Gkelis, Spyros; Lanaras, Thomas; Sivonen, Kaarina

    2015-10-01

    Cyanobacterial harmful algal blooms represent one of the most conspicuous waterborne microbial hazards in aquatic environments mostly due to the production of toxic secondary metabolites, mainly microcystins (MCs). Other bioactive peptides are frequently found in cyanobacterial blooms, yet their concentration and ecological relevance is still unknown. In this paper we studied the presence and concentration of cyanobacterial peptides (microcystins, anabaenopeptins, anabaenopeptilides) in 36 Greek freshwater bodies, using HPLC-DAD, ELISA, and PP1IA. Microcystins were found in more than 90% of the samples investigated, indicating that microcystin-producing strains seem to also occur in lakes without blooms. Microcystins MC-RR, MC-LR, and MC-YR were the main toxin constituents of the bloom samples. Anabaenopeptin A and B were predominant in some samples, whereas anabaenopeptolide 90A was the only peptide found in Lake Mikri Prespa. The intracellular concentrations of anabaenopeptins produced by cyanobacterial bloom populations are determined for the first time in this study; the high (>1000 µg·L(-1)) anabaenopeptin concentration found indicates there may be some impacts, at least on the ecology and the food web structure of the aquatic ecosystems. The maximum intracellular MC values measured in Lakes Kastoria and Pamvotis, exceeding 10,000 µg·L(-1), are among the highest reported. PMID:26473888

  17. Relation between primary liver cancer occurrence and freshwater Cyanobacterial blooms in Serbia

    NASA Astrophysics Data System (ADS)

    Svirčev, Z.; Miladinov-Mikov, M.; Simeunović, J.; Vidović, M.; Stojanović, D.

    2009-04-01

    Since 1980 cyanobacterial blooms occurred in a large number of reservoirs, lakes and running water ecosystems (rivers and channels) in Serbia. Among 49 reservoirs examined, 32 were found in blooming condition almost every year during last 2 decades. All natural lakes and 12 river and channel localities in Vojvodina province (agricultural part) proved to be sites with cyanobacterial proliferation. The part of Central Serbia is very problematic for ground water supply. For that reason 21 reservoirs serve as drinking water suppliers. Significant and persistant cyanobacterial blooms have been recognized in 9 of them. Samples for cyanotoxin analyses were taken during and after blooms in Celije Reservoir and in drinking water in Krusevac town 2 days later. Concentratins of Microcystin-LR were 460 µg•L-1 and for Microcystin-RR 170 µg•L-1. Drinking water contained 2 and 0.6 µg•L-1, respectively. Serbia consists of 30 administrative units, in three of which studies for Primary Liver Cancer (PLC) were conducted independently: Vojvodina, where drinking-water is supplied only from deep wells where 7 regions were studied, Kosovo with a few high mountain reservoirs for water supply without cyanobacterial proliferation where 6 regions were studied, and Central Serbia, where 17 regions were studied. Central Serbia showed 7 regions with extremly high PLC incidence and 8 regions with lower PLC incidence. In the two investigated periods, the high PLC mortality of 11.6 in 1980-1995 and extremely high PLC incidence of 26 in 2000 was observed in the regions affected by heavy cyanobacterial blooms. In contrast, the regions not affected by the blooms, PLC mortality and incidence rates were substantially lower: from 1980-1995 mortality rate ammounted to 2.7 in Kosovo, 7.6 in Vojvodina, and 8.5 in the non-affected regions of Central Serbia, and in 2000 incidence rate ammounted to 4.1 (Kosovo), 6.6 (Vojvodina), and 7.5 in the non-affected regions of Central Serbia. The uneven

  18. Cyanobacterial toxins: a qualitative meta-analysis of concentrations, dosage and effects in freshwater, estuarine and marine biota.

    PubMed

    Ibelings, Bas W; Havens, Karl E

    2008-01-01

    to degradation and excretion at every level. Nevertheless toxins were present at all tropic levels, indicating that some vectorial transport must take place, and in sufficient quantities for effects to possibly occur. Feeding seemed to be the most important route for exposure of aquatic biota to cyanobacterial toxins. A fair number of studies focus on dissolved toxins, but in those studies purified toxin typically is used, and biota do not appear very sensitive to this form of exposure. More effects are found when crude cyanobacterial cell lysates are used, indicating that there may be synergistic effects between different bioactive compounds. Aquatic biota are by no means defenseless against toxic cyanobacteria. Several studies indicate that those species that are most frequently exposed to toxins in their natural environment are also the most tolerant. Protection includes behavioral mechanisms, detoxication of MC and NODLN by conjugation with glutathione, and fairly rapid depuration and excretion. A common theme in much of the ecological studies is that of modulating factors. Effects are seldom straightforward, but are dependent on factors like the (feeding) condition of the animals, environmental conditions and the history of exposure (acclimation and adaptation to toxic cyanobacteria). This makes it harder to generalize on what is known about ecological effects of cyanobacterial toxins. The paper concludes by summarizing the risks for birds, fish, macroinvertebrates and zooplankton. Although acute (lethal) effects are mentioned in the literature, mass mortalities of--especially--fish are more likely to be the result of multiple stress factors that co-occur during cyanobacterial blooms. Bivalves appear remarkably resistant, whilst the harmful effects of cyanobacteria on zooplankton vary widely and the specific contribution of toxins is hard to evaluate. PMID:18461789

  19. Global patterns of freshwater species diversity, threat and endemism

    PubMed Central

    Collen, Ben; Whitton, Felix; Dyer, Ellie E; Baillie, Jonathan E M; Cumberlidge, Neil; Darwall, William R T; Pollock, Caroline; Richman, Nadia I; Soulsby, Anne-Marie; Böhm, Monika

    2014-01-01

    Aim Global-scale studies are required to identify broad-scale patterns in the distributions of species, to evaluate the processes that determine diversity and to determine how similar or different these patterns and processes are among different groups of freshwater species. Broad-scale patterns of spatial variation in species distribution are central to many fundamental questions in macroecology and conservation biology. We aimed to evaluate how congruent three commonly used metrics of diversity were among taxa for six groups of freshwater species. Location Global. Methods We compiled geographical range data on 7083 freshwater species of mammals, amphibians, reptiles, fishes, crabs and crayfish to evaluate how species richness, richness of threatened species and endemism are distributed across freshwater ecosystems. We evaluated how congruent these measures of diversity were among taxa at a global level for a grid cell size of just under 1°. Results We showed that although the risk of extinction faced by freshwater decapods is quite similar to that of freshwater vertebrates, there is a distinct lack of spatial congruence in geographical range between different taxonomic groups at this spatial scale, and a lack of congruence among three commonly used metrics of biodiversity. The risk of extinction for freshwater species was consistently higher than for their terrestrial counterparts. Main conclusions We demonstrate that broad-scale patterns of species richness, threatened-species richness and endemism lack congruence among the six freshwater taxonomic groups examined. Invertebrate species are seldom taken into account in conservation planning. Our study suggests that both the metric of biodiversity and the identity of the taxa on which conservation decisions are based require careful consideration. As geographical range information becomes available for further sets of species, further testing will be warranted into the extent to which geographical variation in

  20. Accumulation and depuration of cyanobacterial paralytic shellfish toxins by the freshwater mussel Anodonta cygnea.

    PubMed

    Pereira, Paulo; Dias, Elsa; Franca, Susana; Pereira, Elisa; Carolino, Manuela; Vasconcelos, Vitor

    2004-07-14

    The increasing frequency by which the production of paralytic shellfish toxins (PST) by freshwater bloom-forming cyanobacteria is being noticed world-wide raises the possibility of PST bioaccumulation by freshwater mussels. This study evaluates PST accumulation and depuration by the freshwater mussel Anodonta cygnea exposed over a 14-day period to high densities (mean = 1.4 x 10(9) cells1(-1), S.D. = 0.29 x 10(9) cellsl(-1)) of the toxic cyanobacterium Aphanizomenon issatschenkoi (corresponding to a mean toxin concentration of 25.5 nmol PSTl(-1), S.D. = 9.9 nmol PSTl(-1)). Mussels were subsequently detoxified either by starvation or by feeding on the non-toxic green-algae Ankistodesmus falcatus. Filter feeding activity and toxin uptake by the mussels were followed by cell counting and toxin analysis in water samples taken before and after each daily water renewal. The accumulation and depuration of PST as well as the anatomical distribution of toxins were monitored throughout the experiment by HPLC analysis of mussel extracts. Mussels fed the toxic cyanobacterium removed on average 65.3% of cells and 40.36% of total PST daily provided. Daily rates of cell clearance (% of initial) were negatively correlated with the amounts of PST daily provided (but not with the amount of cells). This suggests a negative effect of toxins on the feeding behaviour of mussels. Small amounts of toxins could be detected in the mussels after the second day of exposure, reaching a maximum of 26 microg PST100 g(-1) by day 7. The viscera contained the greatest proportion of toxins (78%) at the start of the toxification. However, increasing amounts of PST were found in the remaining tissues (gills, mantle and foot) over time. Toxins detected in the mussel extracts were the same provided in the dietary A. issatschenkoi. Nevertheless, mussels showed a higher proportion of saxitoxin and decarbomoylsaxitoxin and a lower proportion of gonyautoxin-5 than the fed cyanobacterium. Similar depuration

  1. THREATENED AND ENDANGERED FRESHWATER FISH AND MUSSEL SPECIES RICHNESS

    EPA Science Inventory

    These data represent predicted current distributions of all US listed Threatened and Endangered freshwater fish and freshwater mussels in the Middle-Atlantic region. The data are available for both 8-digit HUCs and EMAP hexagons and represent total species counts for each spatia...

  2. Avian vacuolar myelinopathy linked to exotic aquatic plants and a novel cyanobacterial species.

    PubMed

    Wilde, Susan B; Murphy, Thomas M; Hope, Charlotte P; Habrun, Sarah K; Kempton, Jason; Birrenkott, Anna; Wiley, Faith; Bowerman, William W; Lewitus, Alan J

    2005-06-01

    Invasions of exotic species have created environmental havoc through competition and displacement of native plants and animals. The introduction of hydrilla (Hydrilla verticillata) into the United States in the 1960s has been detrimental to navigation, power generation, water intake, and water quality (McCann et al., 1996). Our field surveys and feeding studies have now implicated exotic hydrilla and associated epiphytic cyanobacterial species as a link to avian vacuolar myelinopathy (AVM), an emerging avian disease affecting herbivorous waterbirds and their avian predators. AVM, first reported in 1994, has caused the death of at least 100 bald eagles (Haliaeetus leucocephalus) and thousands of American coots (Fulica americana) at 11 sites from Texas to North Carolina (Thomas et al., 1998; Rocke et al., 2002). Our working hypothesis is that the agent of this disease is an uncharacterized neurotoxin produced by a novel cyanobacterial epiphyte of the order Stigonematales. This undescribed species covers up to 95% of the surface area of leaves in reservoirs where bird deaths have occurred from the disease. In addition, this species is rare or not found on hydrilla collected at sites where AVM disease has not been diagnosed. Laboratory feeding trials and a sentinel bird study using naturally occurring blooms of cyanobacteria on hydrilla leaves and farm-raised mallard ducks (Anas platyrhynchos) induced the disease experimentally. Since 1994 AVM has been diagnosed in additional sites from Texas to North Carolina. Specific site characteristics that produce the disjunct distribution of AVM are unknown, but it is probable that the incidence of this disease will increase with the introduction of hydrilla and associated cyanobacterial species into additional ponds, lakes, and reservoirs. PMID:15892059

  3. Bacterial Community Composition of Size-Fractioned Aggregates within the Phycosphere of Cyanobacterial Blooms in a Eutrophic Freshwater Lake

    PubMed Central

    Cai, Haiyuan; Jiang, Helong; Krumholz, Lee R.; Yang, Zhen

    2014-01-01

    Bacterial community composition of different sized aggregates within the Microcystis cyanobacterial phycosphere were determined during summer and fall in Lake Taihu, a eutrophic lake in eastern China. Bloom samples taken in August and September represent healthy bloom biomass, whereas samples from October represent decomposing bloom biomass. To improve our understanding of the complex interior structure in the phycosphere, bloom samples were separated into large (>100 µm), medium (10–100 µm) and small (0.2–10 µm) size aggregates. Species richness and library coverage indicated that pyrosequencing recovered a large bacterial diversity. The community of each size aggregate was highly organized, indicating highly specific conditions within the Microcystis phycosphere. While the communities of medium and small-size aggregates clustered together in August and September samples, large- and medium-size aggregate communities in the October sample were grouped together and distinct from small-size aggregate community. Pronounced changes in the absolute and relative percentages of the dominant genus from the two most important phyla Proteobacteria and Bacteroidetes were observed among the various size aggregates. Bacterial species on large and small-size aggregates likely have the ability to degrade high and low molecular weight compounds, respectively. Thus, there exists a spatial differentiation of bacterial taxa within the phycosphere, possibly operating in sequence and synergy to catalyze the turnover of complex organic matters. PMID:25144467

  4. Patterns of Freshwater Species Richness, Endemism, and Vulnerability in California.

    PubMed

    Howard, Jeanette K; Klausmeyer, Kirk R; Fesenmyer, Kurt A; Furnish, Joseph; Gardali, Thomas; Grantham, Ted; Katz, Jacob V E; Kupferberg, Sarah; McIntyre, Patrick; Moyle, Peter B; Ode, Peter R; Peek, Ryan; Quiñones, Rebecca M; Rehn, Andrew C; Santos, Nick; Schoenig, Steve; Serpa, Larry; Shedd, Jackson D; Slusark, Joe; Viers, Joshua H; Wright, Amber; Morrison, Scott A

    2015-01-01

    The ranges and abundances of species that depend on freshwater habitats are declining worldwide. Efforts to counteract those trends are often hampered by a lack of information about species distribution and conservation status and are often strongly biased toward a few well-studied groups. We identified the 3,906 vascular plants, macroinvertebrates, and vertebrates native to California, USA, that depend on fresh water for at least one stage of their life history. We evaluated the conservation status for these taxa using existing government and non-governmental organization assessments (e.g., endangered species act, NatureServe), created a spatial database of locality observations or distribution information from ~400 data sources, and mapped patterns of richness, endemism, and vulnerability. Although nearly half of all taxa with conservation status (n = 1,939) are vulnerable to extinction, only 114 (6%) of those vulnerable taxa have a legal mandate for protection in the form of formal inclusion on a state or federal endangered species list. Endemic taxa are at greater risk than non-endemics, with 90% of the 927 endemic taxa vulnerable to extinction. Records with spatial data were available for a total of 2,276 species (61%). The patterns of species richness differ depending on the taxonomic group analyzed, but are similar across taxonomic level. No particular taxonomic group represents an umbrella for all species, but hotspots of high richness for listed species cover 40% of the hotspots for all other species and 58% of the hotspots for vulnerable freshwater species. By mapping freshwater species hotspots we show locations that represent the top priority for conservation action in the state. This study identifies opportunities to fill gaps in the evaluation of conservation status for freshwater taxa in California, to address the lack of occurrence information for nearly 40% of freshwater taxa and nearly 40% of watersheds in the state, and to implement adequate

  5. Patterns of Freshwater Species Richness, Endemism, and Vulnerability in California

    PubMed Central

    Furnish, Joseph; Gardali, Thomas; Grantham, Ted; Katz, Jacob V. E.; Kupferberg, Sarah; McIntyre, Patrick; Moyle, Peter B.; Ode, Peter R.; Peek, Ryan; Quiñones, Rebecca M.; Rehn, Andrew C.; Santos, Nick; Schoenig, Steve; Serpa, Larry; Shedd, Jackson D.; Slusark, Joe; Viers, Joshua H.; Wright, Amber; Morrison, Scott A.

    2015-01-01

    The ranges and abundances of species that depend on freshwater habitats are declining worldwide. Efforts to counteract those trends are often hampered by a lack of information about species distribution and conservation status and are often strongly biased toward a few well-studied groups. We identified the 3,906 vascular plants, macroinvertebrates, and vertebrates native to California, USA, that depend on fresh water for at least one stage of their life history. We evaluated the conservation status for these taxa using existing government and non-governmental organization assessments (e.g., endangered species act, NatureServe), created a spatial database of locality observations or distribution information from ~400 data sources, and mapped patterns of richness, endemism, and vulnerability. Although nearly half of all taxa with conservation status (n = 1,939) are vulnerable to extinction, only 114 (6%) of those vulnerable taxa have a legal mandate for protection in the form of formal inclusion on a state or federal endangered species list. Endemic taxa are at greater risk than non-endemics, with 90% of the 927 endemic taxa vulnerable to extinction. Records with spatial data were available for a total of 2,276 species (61%). The patterns of species richness differ depending on the taxonomic group analyzed, but are similar across taxonomic level. No particular taxonomic group represents an umbrella for all species, but hotspots of high richness for listed species cover 40% of the hotspots for all other species and 58% of the hotspots for vulnerable freshwater species. By mapping freshwater species hotspots we show locations that represent the top priority for conservation action in the state. This study identifies opportunities to fill gaps in the evaluation of conservation status for freshwater taxa in California, to address the lack of occurrence information for nearly 40% of freshwater taxa and nearly 40% of watersheds in the state, and to implement adequate

  6. Cyanobacterial toxins: risk management for health protection.

    PubMed

    Codd, Geoffrey A; Morrison, Louise F; Metcalf, James S

    2005-03-15

    This paper reviews the occurrence and properties of cyanobacterial toxins, with reference to the recognition and management of the human health risks which they may present. Mass populations of toxin-producing cyanobacteria in natural and controlled waterbodies include blooms and scums of planktonic species, and mats and biofilms of benthic species. Toxic cyanobacterial populations have been reported in freshwaters in over 45 countries, and in numerous brackish, coastal, and marine environments. The principal toxigenic genera are listed. Known sources of the families of cyanobacterial toxins (hepato-, neuro-, and cytotoxins, irritants, and gastrointestinal toxins) are briefly discussed. Key procedures in the risk management of cyanobacterial toxins and cells are reviewed, including derivations (where sufficient data are available) of tolerable daily intakes (TDIs) and guideline values (GVs) with reference to the toxins in drinking water, and guideline levels for toxigenic cyanobacteria in bathing waters. Uncertainties and some gaps in knowledge are also discussed, including the importance of exposure media (animal and plant foods), in addition to potable and recreational waters. Finally, we present an outline of steps to develop and implement risk management strategies for cyanobacterial cells and toxins in waterbodies, with recent applications and the integration of Hazard Assessment Critical Control Point (HACCP) principles. PMID:15737680

  7. Cyanobacterial toxins: risk management for health protection

    SciTech Connect

    Codd, Geoffrey A.; Morrison, Louise F.; Metcalf, James S

    2005-03-15

    This paper reviews the occurrence and properties of cyanobacterial toxins, with reference to the recognition and management of the human health risks which they may present. Mass populations of toxin-producing cyanobacteria in natural and controlled waterbodies include blooms and scums of planktonic species, and mats and biofilms of benthic species. Toxic cyanobacterial populations have been reported in freshwaters in over 45 countries, and in numerous brackish, coastal, and marine environments. The principal toxigenic genera are listed. Known sources of the families of cyanobacterial toxins (hepato-, neuro-, and cytotoxins, irritants, and gastrointestinal toxins) are briefly discussed. Key procedures in the risk management of cyanobacterial toxins and cells are reviewed, including derivations (where sufficient data are available) of tolerable daily intakes (TDIs) and guideline values (GVs) with reference to the toxins in drinking water, and guideline levels for toxigenic cyanobacteria in bathing waters. Uncertainties and some gaps in knowledge are also discussed, including the importance of exposure media (animal and plant foods), in addition to potable and recreational waters. Finally, we present an outline of steps to develop and implement risk management strategies for cyanobacterial cells and toxins in waterbodies, with recent applications and the integration of Hazard Assessment Critical Control Point (HACCP) principles.

  8. Escape from the cryptic species trap: lichen evolution on both sides of a cyanobacterial acquisition event.

    PubMed

    Schneider, Kevin; Resl, Philipp; Spribille, Toby

    2016-07-01

    Large, architecturally complex lichen symbioses arose only a few times in evolution, increasing thallus size by orders of magnitude over those from which they evolved. The innovations that enabled symbiotic assemblages to acquire and maintain large sizes are unknown. We mapped morphometric data against an eight-locus fungal phylogeny across one of the best-sampled thallus size transition events, the origins of the Placopsis lichen symbiosis, and used a phylogenetic comparative framework to explore the role of nitrogen-fixing cyanobacteria in size differences. Thallus thickness increased by >150% and fruiting body core volume increased ninefold on average after acquisition of cyanobacteria. Volume of cyanobacteria-containing structures (cephalodia), once acquired, correlates with thallus thickness in both phylogenetic generalized least squares and phylogenetic generalized linear mixed-effects analyses. Our results suggest that the availability of nitrogen is an important factor in the formation of large thalli. Cyanobacterial symbiosis appears to have enabled lichens to overcome size constraints in oligotrophic environments such as acidic, rain-washed rock surfaces. In the case of the Placopsis fungal symbiont, this has led to an adaptive radiation of more than 60 recognized species from related crustose members of the genus Trapelia. Our data suggest that precyanobacterial symbiotic lineages were constrained to forming a narrow range of phenotypes, so-called cryptic species, leading systematists until now to recognize only six of the 13 species clusters we identified in Trapelia. PMID:27037681

  9. The cyanobacterial CCM as a source of genes for improving photosynthetic CO2 fixation in crop species.

    PubMed

    Price, G Dean; Pengelly, Jasper J L; Forster, Britta; Du, Jiahui; Whitney, Spencer M; von Caemmerer, Susanne; Badger, Murray R; Howitt, Susan M; Evans, John R

    2013-01-01

    Crop yields need to nearly double over the next 35 years to keep pace with projected population growth. Improving photosynthesis, via a range of genetic engineering strategies, has been identified as a promising target for crop improvement with regard to increased photosynthetic yield and better water-use efficiency (WUE). One approach is based on integrating components of the highly efficient CO(2)-concentrating mechanism (CCM) present in cyanobacteria (blue-green algae) into the chloroplasts of key C(3) crop plants, particularly wheat and rice. Four progressive phases towards engineering components of the cyanobacterial CCM into C(3) species can be envisaged. The first phase (1a), and simplest, is to consider the transplantation of cyanobacterial bicarbonate transporters to C(3) chloroplasts, by host genomic expression and chloroplast targeting, to raise CO(2) levels in the chloroplast and provide a significant improvement in photosynthetic performance. Mathematical modelling indicates that improvements in photosynthesis as high as 28% could be achieved by introducing both of the single-gene, cyanobacterial bicarbonate transporters, known as BicA and SbtA, into C(3) plant chloroplasts. Part of the first phase (1b) includes the more challenging integration of a functional cyanobacterial carboxysome into the chloroplast by chloroplast genome transformation. The later three phases would be progressively more elaborate, taking longer to engineer other functional components of the cyanobacterial CCM into the chloroplast, and targeting photosynthetic and WUE efficiencies typical of C(4) photosynthesis. These later stages would include the addition of NDH-1-type CO(2) pumps and suppression of carbonic anhydrase and C(3) Rubisco in the chloroplast stroma. We include a score card for assessing the success of physiological modifications gained in phase 1a. PMID:23028015

  10. Recent radiation in a marine and freshwater dinoflagellate species flock.

    PubMed

    Annenkova, Nataliia V; Hansen, Gert; Moestrup, Øjvind; Rengefors, Karin

    2015-08-01

    Processes of rapid radiation among unicellular eukaryotes are much less studied than among multicellular organisms. We have investigated a lineage of cold-water microeukaryotes (protists) that appear to have diverged recently. This lineage stands in stark contrast to known examples of phylogenetically closely related protists, in which genetic difference is typically larger than morphological differences. We found that the group not only consists of the marine-brackish dinoflagellate species Scrippsiella hangoei and the freshwater species Peridinium aciculiferum as discovered previously but also of a whole species flock. The additional species include Peridinium euryceps and Peridinium baicalense, which are restricted to a few lakes, in particular to the ancient Lake Baikal, Russia, and freshwater S. hangoei from Lake Baikal. These species are characterized by relatively large conspicuous morphological differences, which have given rise to the different species descriptions. However, our scanning electron microscopic studies indicate that they belong to a single genus according to traditional morphological characterization of dinoflagellates (thecal plate patterns). Moreover, we found that they have identical SSU (small subunit) rDNA fragments and distinct but very small differences in the DNA markers LSU (large subunit) rDNA, ITS2 (internal transcribed spacer 2) and COB (cytochrome b) gene, which are used to delineate dinoflagellates species. As some of the species co-occur, and all four have small but species-specific sequence differences, we suggest that these taxa are not a case of phenotypic plasticity but originated via recent adaptive radiation. We propose that this is the first clear example among free-living microeukaryotes of recent rapid diversification into several species followed by dispersion to environments with different ecological conditions. PMID:25603395

  11. Structural Dynamics of Community Gene Expression In a Freshwater Cyanobacterial Bloom Over a Day-Night Cycle

    NASA Astrophysics Data System (ADS)

    Wang, J.; Fernando, S.; Thompson, J. R.

    2011-12-01

    Cyanobacterial blooms are a major problem in eutrophic lakes and reservoirs, negatively impacting the ecology of the water body through oxygen depletion upon bloom decay and in some cases through production of toxins. Waterborne cyanobacterial toxins pose a public health threat through drinking and recreational exposure. The frequency of harmful cyanobacterial blooms (cyanoHABs) is predicted to increase due to warming regional climates (Paerl et.al, 2011) and increases in non-point source pollution due to urban expansion (Novotny, 2011). CyanoHABs represent complex consortia of cyanobacteria that live in association with diverse assemblages of heterotrophic and anoxygenic photosynthetic bacteria. A better understanding of the structure, function, and interaction between members of the complex microbial communities that support the proliferation of toxigenic cyanobacteria will improve our ability to prevent and control cyanoHABs. Studies of community gene expression, or metatranscriptomics, provide a powerful approach for quantifying changes in both the taxonomic composition (structure) and activity (function) of complex microbial systems in response to dynamic environmental conditions. We have used next-generation Illumina sequencing to characterize the metatranscriptome of a tropical eutrophic drinking water reservoir dominated by the toxigenic cyanobacterium Microcystis aeruginosa over a day/night cycle. Bacterioplankton sampling was carried out at six time points over a 24 hour period to capture variability associated with changes in the balance between phototrophic and heterotrophic activity. Total RNA was extracted and subjected to ribosomal depletion followed by cDNA synthesis and sequencing, generating 493,468 to 678,064 95-101 bp post-quality control reads per sample. Hierarchical Clustering of transcriptional profiles supported sorting of samples into two clusters corresponding to "day" and "night" collection times. Annotation of reads through the MG

  12. Can the Cyanobacterial Carbon-Concentrating Mechanism Increase Photosynthesis in Crop Species? A Theoretical Analysis1[W][OPEN

    PubMed Central

    McGrath, Justin M.; Long, Stephen P.

    2014-01-01

    Experimental elevation of [CO2] around C3 crops in the field has been shown to increase yields by suppressing the Rubisco oxygenase reaction and, in turn, photorespiration. Bioengineering a cyanobacterial carbon-concentrating mechanism (CCM) into C3 crop species provides a potential means of elevating [CO2] at Rubisco, thereby decreasing photorespiration and increasing photosynthetic efficiency and yield. The cyanobacterial CCM is an attractive alternative relative to other CCMs, because its features do not require anatomical changes to leaf tissue. However, the potential benefits of engineering the entire CCM into a C3 leaf are unexamined. Here, a CO2 and HCO3− diffusion-reaction model is developed to examine how components of the cyanobacterial CCM affect leaf light-saturated CO2 uptake (Asat) and to determine whether a different Rubisco isoform would perform better in a leaf with a cyanobacterial CCM. The results show that the addition of carboxysomes without other CCM components substantially decreases Asat and that the best first step is the addition of HCO3− transporters, as a single HCO3− transporter increased modeled Asat by 9%. Addition of all major CCM components increased Asat from 24 to 38 µmol m−2 s−1. Several Rubisco isoforms were compared in the model, and increasing ribulose bisphosphate regeneration rate will allow for further improvements by using a Rubisco isoform adapted to high [CO2]. Results from field studies that artificially raise [CO2] suggest that this 60% increase in Asat could result in a 36% to 60% increase in yield. PMID:24550242

  13. Toxic potential of five freshwater Phormidium species (Cyanoprokaryota).

    PubMed

    Teneva, Ivanka; Dzhambazov, Balik; Koleva, Lyubka; Mladenov, Rumen; Schirmer, Kristin

    2005-05-01

    Among the Cyanoprokaryota (blue-green algae), the genus Phormidium has thus far rarely been studied with respect to toxin production and potentially resulting human and environmental health effects. We here show that five previously unexplored freshwater species of this genus (Ph. bijugatum, Ph. molle, Ph. papyraceum, Ph. uncinatum, Ph. autumnale) are indeed capable of producing bioactive compounds. Phormidium extracts caused weight loss as well as neuro/hepatotoxic symptoms in mice, and in the case of Ph. bijugatum even death. Very low levels of saxitoxins and microcystins, as confirmed by ELISA, were insufficient to explain this toxicity and the differing toxic potencies of the Phormidium species. Qualitative HPLC analyses confirmed different substance patterns and in the future could aid in the separation of fractions for more detailed substance characterisation. The results in vivo were confirmed in vitro using cells of human, mouse and fish. The fish cells responded least sensitive but proved useful in studying the temperature dependence of the toxicity by the Phormidium samples. Further, the human cells were more sensitive than the mouse cells thus suggesting that the former may be a more appropriate choice for studying the impact of Phormidium to man. Among the human cells, two cancer cell lines were more responsive to one of the samples than a normal cell line, thereby indicating a potential anti-tumour activity. Thus, the five freshwater Phormidium species should be considered in environmental risk assessment but as well, as a source of therapeutic agents. PMID:15804520

  14. Classification of species attributes for Pacific Northwest freshwater fishes

    USGS Publications Warehouse

    Zaroban, D.W.; Mulvey, M.P.; Maret, T.R.; Hughes, R.M.; Merritt, G.D.

    1999-01-01

    Fish assemblages integrate physical and chemical habitat conditions and are used to evaluate the condition of water resources in the Pacific Northwest. To facilitate such evaluations, we classified each of the 132 freshwater fish species known to occur in the Pacific Northwest (Idaho, Oregon, Washington) by its origin, overall pollution tolerance, adult habitat, adult feeding, and water temperature preference. Recommendations from regional fishery experts, published literature, and the aggregate experience of the authors were used to classify species. The attribute classifications were responsive to human disturbance of aquatic habitats when applied to fish assemblages sampled from throughout the region. Our attribute classification of fish species promotes use of fish assemblages to evaluate water resource conditions regionally and fosters greater acceptance of biological measures of water resource quality.

  15. Status, Alert System, and Prediction of Cyanobacterial Bloom in South Korea

    PubMed Central

    Srivastava, Ankita; Ahn, Chi-Yong; Asthana, Ravi Kumar; Lee, Hyung-Gwan; Oh, Hee-Mock

    2015-01-01

    Bloom-forming freshwater cyanobacterial genera pose a major ecological problem due to their ability to produce toxins and other bioactive compounds, which can have important implications in illnesses of humans and livestock. Cyanobacteria such as Microcystis, Anabaena, Oscillatoria, Phormidium, and Aphanizomenon species producing microcystins and anatoxin-a have been predominantly documented from most South Korean lakes and reservoirs. With the increase in frequency of such blooms, various monitoring approaches, treatment processes, and prediction models have been developed in due course. In this paper we review the field studies and current knowledge on toxin producing cyanobacterial species and ecological variables that regulate toxin production and bloom formation in major rivers (Han, Geum, Nakdong, and Yeongsan) and reservoirs in South Korea. In addition, development of new, fast, and high-throughput techniques for effective monitoring is also discussed with cyanobacterial bloom advisory practices, current management strategies, and their implications in South Korean freshwater bodies. PMID:25705675

  16. Ligand-binding assays for cyanobacterial neurotoxins targeting cholinergic receptors.

    PubMed

    Aráoz, Rómulo; Vilariño, Natalia; Botana, Luis M; Molgó, Jordi

    2010-07-01

    Toxic cyanobacterial blooms are a threat to public health because of the capacity of some cyanobacterial species to produce potent hepatotoxins and neurotoxins. Cyanobacterial neurotoxins are involved in the rapid death of wild and domestic animals by targeting voltage gated sodium channels and cholinergic synapses, including the neuromuscular junction. Anatoxin-a and its methylene homologue homoanatoxin-a are potent agonists of nicotinic acetylcholine receptors. Since the structural determination of anatoxin-a, several mass spectrometry-based methods have been developed for detection of anatoxin-a and, later, homoanatoxin-a. Mass spectrometry-based techniques provide accuracy, precision, selectivity, sensitivity, reproducibility, adequate limit of detection, and structural and quantitative information for analyses of cyanobacterial anatoxins from cultured and environmental cyanobacterial samples. However, these physicochemical techniques will only detect known toxins for which toxin standards are commercially available, and they require highly specialized laboratory personnel and expensive equipment. Receptor-based assays are functional methods that are based on the mechanism of action of a class of toxins and are thus, suitable tools for survey of freshwater reservoirs for cyanobacterial anatoxins. The competition between cyanobacterial anatoxins and a labelled ligand for binding to nicotinic acetylcholine receptors is measured radioactively or non-radioactively providing high-throughput screening formats for routine detection of this class of neurotoxins. The mouse bioassay is the method of choice for marine toxin monitoring, but has to be replaced by fully validated functional methods. In this paper we review the ligand-binding assays developed for detection of cyanobacterial and algal neurotoxins targeting the nicotinic acetylcholine receptors and for high-throughput screening of novel nicotinic agents. PMID:20238109

  17. Ecotoxicological effects of selected cyanobacterial secondary metabolites a short review

    SciTech Connect

    Wiegand, C. . E-mail: cwiegand@igb-berlin.de; Pflugmacher, S. . E-mail: pflugmacher@igb-berlin.de

    2005-03-15

    Cyanobacteria are one of the most diverse groups of gram-negative photosynthetic prokaryotes. Many of them are able to produce a wide range of toxic secondary metabolites. These cyanobacterial toxins can be classified in five different groups: hepatotoxins, neurotoxins, cytotoxins, dermatotoxins, and irritant toxins (lipopolysaccharides). Cyanobacterial blooms are hazardous due to this production of secondary metabolites and endotoxins, which could be toxic to animals and plants. Many of the freshwater cyanobacterial blooms include species of the toxigenic genera Microcystis, Anabaena, or Plankthotrix. These compounds differ in mechanisms of uptake, affected organs, and molecular mode of action. In this review, the main focus is the aquatic environment and the effects of these toxins to the organisms living there. Some basic toxic mechanisms will be discussed in comparison to the mammalian system.

  18. Nitrogen Forms Influence Microcystin Concentration and Composition via Changes in Cyanobacterial Community Structure

    PubMed Central

    Monchamp, Marie-Eve; Pick, Frances R.; Beisner, Beatrix E.; Maranger, Roxane

    2014-01-01

    The eutrophication of freshwaters is a global health concern as lakes with excess nutrients are often subject to toxic cyanobacterial blooms. Although phosphorus is considered the main element regulating cyanobacterial biomass, nitrogen (N) concentration and more specifically the availability of different N forms may influence the overall toxicity of blooms. In this study of three eutrophic lakes prone to cyanobacterial blooms, we examined the effects of nitrogen species and concentrations and other environmental factors in influencing cyanobacterial community structure, microcystin (MC) concentrations and MC congener composition. The identification of specific MC congeners was of particular interest as they vary widely in toxicity. Different nitrogen forms appeared to influence cyanobacterial community structure leading to corresponding effects on MC concentrations and composition. Total MC concentrations across the lakes were largely explained by a combination of abiotic factors: dissolved organic nitrogen, water temperature and ammonium, but Microcystis spp. biomass was overall the best predictor of MC concentrations. Environmental factors did not appear to affect MC congener composition directly but there were significant associations between specific MC congeners and particular species. Based on redundancy analyses (RDA), the relative biomass of Microcystis aeruginosa was associated with MC-RR, M. wesenbergii with MC-LA and Aphanizomenon flos-aquae with MC-YR. The latter two species are not generally considered capable of MC production. Total nitrogen, water temperature, ammonium and dissolved organic nitrogen influenced the cyanobacterial community structure, which in turn resulted in differences in the dominant MC congener and the overall toxicity. PMID:24427318

  19. Characterization of antioxidant system parameters in four freshwater fish species.

    PubMed

    Atli, Gülüzar; Canli, Esin G; Eroglu, Ali; Canli, Mustafa

    2016-04-01

    The potential use of antioxidant system parameters has gained considerable interest due to their pivotal role of detoxification mechanisms in environmental studies and culture fish point of view. Fish with different ecological needs may have different antioxidant capacity and response to environmental contaminants. Thus, the optimal working conditions and specific enzyme activities (Vmax and Km) of antioxidant system parameters (Superoxide dismutase, SOD; Catalase, CAT; Glutathione peroxidase, GPX; Glutathione reductase, GR and Glutathione S-transferase, GST) and glutathione (GSH) were determined in four commonly cultured freshwater fish species (tilapia; Oreochromis niloticus, carp; Cyprinus carpio, trout; Onchorhynchus mykiss and catfish; Clarias garipienus). Data showed that optimal concentrations of different buffers, pH and specific chemicals for each enzyme and GSH were similar in most cases for all fish species, except a few differences. The highest Vmax and Km values were found in carp for GPX and GST, though these values were the highest in tilapia, catfish and trout for CAT, SOD and GR, respectively. As a conclusion, optimization assays of these parameters in different bioindicator organisms based on their physiological and ecological differences may be useful for the aquatic ecosystem biomonitoring studies and also present fundamental data for utilization in aquaculture. PMID:26707186

  20. Manganese toxicity to tropical freshwater species in low hardness water.

    PubMed

    Harford, Andrew J; Mooney, Thomas J; Trenfield, Melanie A; van Dam, Rick A

    2015-12-01

    Elevated manganese (Mn) is a common contaminant issue for mine water discharges, and previous studies have reported that its toxicity is ameliorated by H(+), Ca(2+), and Mg(2+) ions. In the present study, the toxicity of Mn was assessed in a high risk scenario, that is, the slightly acidic, soft waters of Magela Creek, Kakadu National Park, Northern Territory, Australia. Toxicity estimates were derived for 6 tropical freshwater species (Chlorella sp., Lemna aequinoctialis, Amerianna cumingi, Moinodaphnia macleayi, Hydra viridissima, and Mogurnda mogurnda). Low effect chronic inhibition concentration (IC10) and acute lethal concentration (LC05) values ranged between 140 μg L(-1) and 80,000 μg L(-1), with 3 of the species tested (M. macleayi, A. cumingi, and H. viridissima) being more sensitive to Mn than all but 1 species in the international literature (Hyalella azteca). A loss of Mn was observed on the final day for 2 of the H. viridissima toxicity tests, which may be a result of the complex speciation of Mn and biological oxidation. International data from toxicity tests conducted in natural water with a similar physicochemistry to Magela Creek water were combined with the present study's data to increase the sample size to produce a more reliable species sensitivity distribution. A 99% protection guideline value of 73 μg L(-1) (33-466 μg L(-1)) was derived; the low value of this guideline value reflects the higher toxicity of Mn in slightly acidic soft waters. PMID:26118763

  1. Functional profiling of cyanobacterial genomes and its role in ecological adaptations.

    PubMed

    Prabha, Ratna; Singh, Dhananjaya P; Somvanshi, Pallavi; Rai, Anil

    2016-09-01

    With the availability of complete genome sequences of many cyanobacterial species, it is becoming feasible to study the broad prospective of the environmental adaptation and the overall changes at transcriptional and translational level in these organisms. In the evolutionary phase, niche-specific competitive forces have resulted in specific features of the cyanobacterial genomes. In this study, functional composition of the 84 different cyanobacterial genomes and their adaptations to different environments was examined by identifying the genomic composition for specific cellular processes, which reflect their genomic functional profile and ecological adaptation. It was identified that among cyanobacterial genomes, metabolic genes have major share over other categories and differentiation of genomic functional profile was observed for the species inhabiting different habitats. The cyanobacteria of freshwater and other habitats accumulate large number of poorly characterized genes. Strain specific functions were also reported in many cyanobacterial members, of which an important feature was the occurrence of phage-related sequences. From this study, it can be speculated that habitat is one of the major factors in giving the shape of functional composition of cyanobacterial genomes towards their ecological adaptations. PMID:27408818

  2. Freshwater availability and coastal wetland foundation species: ecological transitions along a rainfall gradient

    USGS Publications Warehouse

    Osland, Michael; Enwright, Nicholas; Stagg, Camille La Fosse

    2014-01-01

    Climate gradient-focused ecological research can provide a foundation for better understanding critical ecological transition points and nonlinear climate-ecological relationships, which is information that can be used to better understand, predict, and manage ecological responses to climate change. In this study, we examined the influence of freshwater availability upon the coverage of foundation plant species in coastal wetlands along a northwestern Gulf of Mexico rainfall gradient. Our research addresses the following three questions: (1) what are the region-scale relationships between measures of freshwater availability (e.g., rainfall, aridity, freshwater inflow, salinity) and the relative abundance of foundation plant species in tidal wetlands; (2) How vulnerable are foundation plant species in tidal wetlands to future changes in freshwater availability; and (3) What is the potential future relative abundance of tidal wetland foundation plant species under alternative climate change scenarios? We developed simple freshwater availability-based models to predict the relative abundance (i.e., coverage) of tidal wetland foundation plant species using climate data (1970-2000), estuarine freshwater inflow-focused data, and coastal wetland habitat data. Our results identify regional ecological thresholds and nonlinear relationships between measures of freshwater availability and the relative abundance of foundation plant species in tidal wetlands. In drier coastal zones, relatively small changes in rainfall could produce comparatively large landscape-scale changes in foundation plant species abundance which would affect some ecosystem good and services. Whereas a drier future would result in a decrease in the coverage of foundation plant species, a wetter future would result in an increase in foundation plant species coverage. In many ways, the freshwater-dependent coastal wetland ecological transitions we observed are analogous to those present in dryland

  3. Local nutrient regimes determine site-specific environmental triggers of cyanobacterial and microcystin variability in urban lakes

    NASA Astrophysics Data System (ADS)

    Sinang, S. C.; Reichwaldt, E. S.; Ghadouani, A.

    2015-05-01

    Toxic cyanobacterial blooms in urban lakes present serious health hazards to humans and animals and require effective management strategies. Managing such blooms requires a sufficient understanding of the controlling environmental factors. A range of them has been proposed in the literature as potential triggers for cyanobacterial biomass development and cyanotoxin (e.g. microcystin) production in freshwater systems. However, the environmental triggers of cyanobacteria and microcystin variability remain a subject of debate due to contrasting findings. This issue has raised the question of whether the relevance of environmental triggers may depend on site-specific combinations of environmental factors. In this study, we investigated the site-specificity of environmental triggers for cyanobacterial bloom and microcystin dynamics in three urban lakes in Western Australia. Our study suggests that cyanobacterial biomass, cyanobacterial dominance and cyanobacterial microcystin content variability were significantly correlated to phosphorus and iron concentrations. However, the correlations were different between lakes, thus suggesting a site-specific effect of these environmental factors. The discrepancies in the correlations could be explained by differences in local nutrient concentration. For instance, we found no correlation between cyanobacterial fraction and total phosphorous (TP) in the lake with the highest TP concentration, while correlations were significant and negative in the other two lakes. In addition, our study indicates that the difference of the correlation between total iron (TFe) and the cyanobacterial fraction between lakes might have been a consequence of differences in the cyanobacterial community structure, specifically the presence or absence of nitrogen-fixing species. In conclusion, our study suggests that identification of significant environmental factors under site-specific conditions is an important strategy to enhance successful outcomes

  4. The Microbiota of Freshwater Fish and Freshwater Niches Contain Omega-3 Fatty Acid-Producing Shewanella Species.

    PubMed

    Dailey, Frank E; McGraw, Joseph E; Jensen, Brittany J; Bishop, Sydney S; Lokken, James P; Dorff, Kellen J; Ripley, Michael P; Munro, James B

    2016-01-01

    Approximately 30 years ago, it was discovered that free-living bacteria isolated from cold ocean depths could produce polyunsaturated fatty acids (PUFA) such as eicosapentaenoic acid (EPA) (20:5n-3) or docosahexaenoic acid (DHA) (22:6n-3), two PUFA essential for human health. Numerous laboratories have also discovered that EPA- and/or DHA-producing bacteria, many of them members of the Shewanella genus, could be isolated from the intestinal tracts of omega-3 fatty acid-rich marine fish. If bacteria contribute omega-3 fatty acids to the host fish in general or if they assist some bacterial species in adaptation to cold, then cold freshwater fish or habitats should also harbor these producers. Thus, we undertook a study to see if these niches also contained omega-3 fatty acid producers. We were successful in isolating and characterizing unique EPA-producing strains of Shewanella from three strictly freshwater native fish species, i.e., lake whitefish (Coregonus clupeaformis), lean lake trout (Salvelinus namaycush), and walleye (Sander vitreus), and from two other freshwater nonnative fish, i.e., coho salmon (Oncorhynchus kisutch) and seeforellen brown trout (Salmo trutta). We were also able to isolate four unique free-living strains of EPA-producing Shewanella from freshwater habitats. Phylogenetic and phenotypic analyses suggest that one producer is clearly a member of the Shewanella morhuae species and another is sister to members of the marine PUFA-producing Shewanella baltica species. However, the remaining isolates have more ambiguous relationships, sharing a common ancestor with non-PUFA-producing Shewanella putrefaciens isolates rather than marine S. baltica isolates despite having a phenotype more consistent with S. baltica strains. PMID:26497452

  5. The Microbiota of Freshwater Fish and Freshwater Niches Contain Omega-3 Fatty Acid-Producing Shewanella Species

    PubMed Central

    McGraw, Joseph E.; Jensen, Brittany J.; Bishop, Sydney S.; Lokken, James P.; Dorff, Kellen J.; Ripley, Michael P.; Munro, James B.

    2015-01-01

    Approximately 30 years ago, it was discovered that free-living bacteria isolated from cold ocean depths could produce polyunsaturated fatty acids (PUFA) such as eicosapentaenoic acid (EPA) (20:5n-3) or docosahexaenoic acid (DHA) (22:6n-3), two PUFA essential for human health. Numerous laboratories have also discovered that EPA- and/or DHA-producing bacteria, many of them members of the Shewanella genus, could be isolated from the intestinal tracts of omega-3 fatty acid-rich marine fish. If bacteria contribute omega-3 fatty acids to the host fish in general or if they assist some bacterial species in adaptation to cold, then cold freshwater fish or habitats should also harbor these producers. Thus, we undertook a study to see if these niches also contained omega-3 fatty acid producers. We were successful in isolating and characterizing unique EPA-producing strains of Shewanella from three strictly freshwater native fish species, i.e., lake whitefish (Coregonus clupeaformis), lean lake trout (Salvelinus namaycush), and walleye (Sander vitreus), and from two other freshwater nonnative fish, i.e., coho salmon (Oncorhynchus kisutch) and seeforellen brown trout (Salmo trutta). We were also able to isolate four unique free-living strains of EPA-producing Shewanella from freshwater habitats. Phylogenetic and phenotypic analyses suggest that one producer is clearly a member of the Shewanella morhuae species and another is sister to members of the marine PUFA-producing Shewanella baltica species. However, the remaining isolates have more ambiguous relationships, sharing a common ancestor with non-PUFA-producing Shewanella putrefaciens isolates rather than marine S. baltica isolates despite having a phenotype more consistent with S. baltica strains. PMID:26497452

  6. CONDITIONS FOR COEXISTENCE OF FRESHWATER MUSSEL SPECIES VIA PARTITIONING OF FISH HOST RESOURCES

    EPA Science Inventory

    Riverine freshwater mussel species can be found in highly diverse communities where many similar species coexist. Mussel species potentially compete for food and space as adults, and for fish host resources during the larval (glochidial) stage. Resource partitioning at the larv...

  7. Polyphasic identification of cyanobacterial isolates from Australia.

    PubMed

    Lee, Elvina; Ryan, Una M; Monis, Paul; McGregor, Glenn B; Bath, Andrew; Gordon, Cameron; Paparini, Andrea

    2014-08-01

    Reliable identification of cyanobacterial isolates has significant socio-economic implications as many bloom-forming species affect the aesthetics and safety of drinking water, through the production of taste and odour compounds or toxic metabolites. The limitations of morphological identification have promoted the application of molecular tools, and encouraged the adoption of combined (polyphasic) approaches that include both microscopy- and DNA-based analyses. In this context, the rapid expansion of available sequence data is expected to allow increasingly reliable identification of cyanobacteria, and ultimately resolve current discrepancies between the two approaches. In the present study morphological and molecular characterisations of cyanobacterial isolates (n = 39), collected from various freshwater sites in Australia, were compared. Sequences were obtained for the small ribosomal subunit RNA gene (16S rDNA) (n = 36), the DNA-dependent RNA polymerase gene (rpoC1) (n = 22), and the phycocyanin operon, with its intergenic spacer region (cpcBA-IGS) (n = 19). Phylogenetic analyses identified three cyanobacterial orders: the Chroococcales (n = 8), Oscillatoriales (n = 6), and Nostocales (n = 25). Interestingly, multiple novel genotypes were identified, with 22% of the strains (17/77) having <95% similarity to available sequences in GenBank. Morphological and molecular data were in agreement at the species level for only 26% of the isolates obtained (10/39), while agreement at the genus level was obtained for 31% (12/39). Confident identification of the remaining 44% of the strains (17/39) beyond the order level was not possible. The present study demonstrates that, despite the taxonomic revisions, and advances in molecular-, and bioinformatics-tools, the lack of reliable morphological features, culture-induced pleomorphism, and proportion of misidentified or poorly described sequences in GenBank, still represent significant factors, impeding the

  8. Biodiversity of freshwater sponges (Porifera: Spongillina) from northeast Brazil: new species and notes on systematics.

    PubMed

    Nicacio, Gilberto; Pinheiro, Ulisses

    2015-01-01

    Systematics and distribution of freshwater sponges is still poorly understood worldwide. This may be due to the scarcity of records, and the limited information about morphological traits used for taxonomy. Brazil has reportedly high species richness in the Neotropical Region; however, this diversity is likely to be significantly underestimated given that there are still many unexplored and poorly sampled areas, mainly in the north and northeast regions. We present here new locality records and taxonomic notes on three families and ten species of freshwater Porifera from northeast Brazil: Metaniidae (1), Potamolepidae (2) and Spongillidae (7). A new species of freshwater sponge is described here (Ephydatia caatingae sp.nov.). Additional notes on the systematics and biogeography of most of these species are also presented. PMID:26249990

  9. Freshwater and brackish bryozoan species of Croatia (Bryozoa: Gymnolaemata, Phylactolaemata) and their genetic identification.

    PubMed

    Franjević, Damjan; Novosel, Maja; Koletić, Nikola

    2015-01-01

    Freshwater and brackish species of bryozoans belong to the Phylactolaemata and Gymnolaemata class. Twelve species of bryozoans were recorded and morphologically determined at eight locations in the Black Sea and the Adriatic basin in Croatia. Twelve species of Bryozoa have been listed in the taxonomic index for Croatia (Conopeum seurati, Lophopus crystallinus Paludicella articulata, Cristatella mucedo, Fredericella sultana, Hyalinella punctata, Plumatella casmiana, Plumatella emarginata, Plumatella fruticosa, Plumatella fungosa, Plumatella geimermassardi and Plumatella repens). For the purposes of gene identification of recorded species, molecular markers for nuclear 18S and 28S genes, ITS2 region and mitochondrial COI gene were amplified. Genetic identifications of morphologically determined bryozoan species were confirmed using highly similar sequences local alignment analysis. Proliferation of freshwater bryozoan species over long distances with the help of the vector animals was confirmed by defining haplotypes on the base of 18S, 28S and ITS2 sequences associated with the Black Sea-Mediterranean waterfowl flyway. PMID:26624355

  10. Characterization factors for water consumption and greenhouse gas emissions based on freshwater fish species extinction.

    PubMed

    Hanafiah, Marlia M; Xenopoulos, Marguerite A; Pfister, Stephan; Leuven, Rob S E W; Huijbregts, Mark A J

    2011-06-15

    Human-induced changes in water consumption and global warming are likely to reduce the species richness of freshwater ecosystems. So far, these impacts have not been addressed in the context of life cycle assessment (LCA). Here, we derived characterization factors for water consumption and global warming based on freshwater fish species loss. Calculation of characterization factors for potential freshwater fish losses from water consumption were estimated using a generic species-river discharge curve for 214 global river basins. We also derived characterization factors for potential freshwater fish species losses per unit of greenhouse gas emission. Based on five global climate scenarios, characterization factors for 63 greenhouse gas emissions were calculated. Depending on the river considered, characterization factors for water consumption can differ up to 3 orders of magnitude. Characterization factors for greenhouse gas emissions can vary up to 5 orders of magnitude, depending on the atmospheric residence time and radiative forcing efficiency of greenhouse gas emissions. An emission of 1 ton of CO₂ is expected to cause the same impact on potential fish species disappearance as the water consumption of 10-1000 m³, depending on the river basin considered. Our results make it possible to compare the impact of water consumption with greenhouse gas emissions. PMID:21574555

  11. Regulation of Gene Expression in Diverse Cyanobacterial Species by Using Theophylline-Responsive Riboswitches

    PubMed Central

    Ma, Amy T.; Schmidt, Calvin M.

    2014-01-01

    Cyanobacteria are photosynthetic bacteria that are currently being developed as biological production platforms. They derive energy from light and carbon from atmospheric carbon dioxide, and some species can fix atmospheric nitrogen. One advantage of developing cyanobacteria for renewable production of biofuels and other biological products is that they are amenable to genetic manipulation, facilitating bioengineering and synthetic biology. To expand the currently available genetic toolkit, we have demonstrated the utility of synthetic theophylline-responsive riboswitches for effective regulation of gene expression in four diverse species of cyanobacteria, including two recent isolates. We evaluated a set of six riboswitches driving the expression of a yellow fluorescent protein reporter in Synechococcus elongatus PCC 7942, Leptolyngbya sp. strain BL0902, Anabaena sp. strain PCC 7120, and Synechocystis sp. strain WHSyn. We demonstrated that riboswitches can offer regulation of gene expression superior to that of the commonly used isopropyl-β-d-thiogalactopyranoside induction of a lacIq-Ptrc promoter system. We also showed that expression of the toxic protein SacB can be effectively regulated, demonstrating utility for riboswitch regulation of proteins that are detrimental to biomass accumulation. Taken together, the results of this work demonstrate the utility and ease of use of riboswitches in the context of genetic engineering and synthetic biology in diverse cyanobacteria, which will facilitate the development of algal biotechnology. PMID:25149516

  12. Regulation of gene expression in diverse cyanobacterial species by using theophylline-responsive riboswitches.

    PubMed

    Ma, Amy T; Schmidt, Calvin M; Golden, James W

    2014-11-01

    Cyanobacteria are photosynthetic bacteria that are currently being developed as biological production platforms. They derive energy from light and carbon from atmospheric carbon dioxide, and some species can fix atmospheric nitrogen. One advantage of developing cyanobacteria for renewable production of biofuels and other biological products is that they are amenable to genetic manipulation, facilitating bioengineering and synthetic biology. To expand the currently available genetic toolkit, we have demonstrated the utility of synthetic theophylline-responsive riboswitches for effective regulation of gene expression in four diverse species of cyanobacteria, including two recent isolates. We evaluated a set of six riboswitches driving the expression of a yellow fluorescent protein reporter in Synechococcus elongatus PCC 7942, Leptolyngbya sp. strain BL0902, Anabaena sp. strain PCC 7120, and Synechocystis sp. strain WHSyn. We demonstrated that riboswitches can offer regulation of gene expression superior to that of the commonly used isopropyl-β-d-thiogalactopyranoside induction of a lacI(q)-Ptrc promoter system. We also showed that expression of the toxic protein SacB can be effectively regulated, demonstrating utility for riboswitch regulation of proteins that are detrimental to biomass accumulation. Taken together, the results of this work demonstrate the utility and ease of use of riboswitches in the context of genetic engineering and synthetic biology in diverse cyanobacteria, which will facilitate the development of algal biotechnology. PMID:25149516

  13. SHORT-TERM TOXICITY OF FIVE OIL S TO FOUR FRESHWATER SPECIES

    EPA Science Inventory

    Short-term lethality tests were conducted with five (waste oil, No. 1 fuel oil, No. 2 fuel oil, mixed blend sweet crude oil, Lloydminister crude oil) oils and four freshwater species. The oils were tested as floating layers, emulsions, and as the water-soluble fraction of 10% oil...

  14. Gasification of cyanobacterial in supercritical water.

    PubMed

    Zhang, Huiwen; Zhu, Wei; Xu, Zhirong; Gong, Miao

    2014-01-01

    Cyanobacterial collected from eutrophic freshwater lakes constituted intractable waste with a rich algae biomass content. Supercritical water gasification (SCWG) was proposed to treat the cyanobacterial and to produce hydrogen for energy. The H 2 yield reached 2.92 mol/kg at reaction conditions of 500 °C, 30 min and 22 MPa; this yield accounted for 26% of the total gaseous products. Abundant ammonia and dissolved reactive phosphorous were concentrated in the liquid product, which could be recovered and used as a liquid fertilizer. Solid residue, which accounted only for about 1% of the wet weight, was mainly composed of coke and ash. The efficiency of H 2 production was better than that from other biomass, because of the abundant organic matter in cyanobacterial. Thus, cyanobacterial are an ideal biomass feedstock for H 2 production from SCWG. PMID:25176482

  15. New species and records of freshwater Chaetonotus (Gastrotricha: Chaetonotidae) from Sweden.

    PubMed

    Kånneby, Tobias

    2013-01-01

    Chaetonotus is the most speciose genus of the family Chaetonotidae within Gastrotricha, a small phylum of aquatic acoelomate invertebrates. The freshwater gastrotrich fauna of Sweden has been studied during the last five years and so far 44 species have been reported in the literature from the country. This study describes the new species, Chaetonotus (Primochaetus) veronicae n. sp., and reports 9 species new to the Swedish fauna raising the known number of freshwater species from the country to 54. Some records stand out from a biogeographic point of view: Chaetonotus (Primochaetus) soberanus is reported for the first time from Europe and Chaetonotus (Chaetonotus) arethusae, Chaetonotus (Chaetonotus) naiadis and Chaetonotus (Hystricochaetonotus) euhystrix are reported for the first time outside the countries from which they were originally described. PMID:26191602

  16. Phylogenetic study of nine species of freshwater monogeneans using secondary structure and motif prediction from India

    PubMed Central

    Chaudhary, Anshu; Singh, Hridaya Shanker

    2012-01-01

    The present study was performed to identify and validate monogenean species from different piscine hosts using molecular tools. Nine species of freshwater monogeneans were collected from gills and skin of freshwater fishes at Hastinapur, Meerut, India. After microscopic examination, molecular analysis was performed utilizing 28S gene marker. Phylogenetic analysis indicated the validation and systematic position of these nine different monogeneans belongs to the Dactylogyridae and Gyrodactylidae families. The findings also confirm that the 28S rDNA sequence is highly conserved and may prove to be useful in taxonomic studies of parasitic platyhelminthes. Besides this, the study is also supplemented by molecular morphometrics that is based on 28S secondary structure homologies of nine monogenean species. The data indicate that 28S motifs i.e., ≤ 50bp in size can also be considered a promising tool for monogenean species identification and their validation. PMID:23144541

  17. Impact of resource availability on species composition and diversity in freshwater nematodes.

    PubMed

    Michiels, Iris C; Traunspurger, Walter

    2005-01-01

    This study investigates the long-term effects of resource availability in a freshwater nematode community. We carried out a mesocosm experiment where natural nematode communities were exposed to nutrient addition/depletion over 2 years. Compared to the nutrient-addition treatment, species richness and diversity were strongly reduced upon nutrient depletion. The functional group of bacterial feeders particularly suffered severely from nutrient depletion. The decrease in diversity of bacterial feeders was linked to reduced species richness and diversity of large omnivorous species, as predicted by trophic-dynamic models. Tilman's (1976) statement, that under low nutrient levels the best competitor dominates the system, was applicable in our system. Upon nutrient depletion, resource depletion led to a monoculture of 1 small bacterial feeder, but even after 2 years of resource depletion, up to 16 species still coexisted. Our results provide strong evidence that freshwater nematode systems can be regulated by nutrient competition. PMID:15365809

  18. Vannellid Species Isolated from Freshwater Source in a Park in Jamaica, West Indies

    PubMed Central

    Todd, Cheridah D.; Reyes-Batlle, María; Valladares, Basilio; Lindo, John F.; Lorenzo-Morales, Jacob

    2015-01-01

    Free-living amoebae (FLA) occupy a wide range of freshwater, marine, and soil habitats, and are opportunistic pathogens in human beings. While Acanthamoeba spp., Naegleria fowleri, and Balamuthia mandrillaris are well-known opportunistic organisms, Vannella epipetala is nonpathogenic. Sediments were collected from a freshwater source from a park in Jamaica to investigate the presence of FLA. Acanthamoeba and Naegleria spp. were not recovered; however, a Vannellid species identified by microscopy and PCR analysis as V. epipetala was isolated. These nonpathogens pose a threat to human beings as they may act as Trojan horses for microsporidian parasites and other pathogens, thereby facilitating their transmission to human beings. PMID:26512204

  19. Vannellid Species Isolated from Freshwater Source in a Park in Jamaica, West Indies.

    PubMed

    Todd, Cheridah D; Reyes-Batlle, María; Valladares, Basilio; Lindo, John F; Lorenzo-Morales, Jacob

    2015-01-01

    Free-living amoebae (FLA) occupy a wide range of freshwater, marine, and soil habitats, and are opportunistic pathogens in human beings. While Acanthamoeba spp., Naegleria fowleri, and Balamuthia mandrillaris are well-known opportunistic organisms, Vannella epipetala is nonpathogenic. Sediments were collected from a freshwater source from a park in Jamaica to investigate the presence of FLA. Acanthamoeba and Naegleria spp. were not recovered; however, a Vannellid species identified by microscopy and PCR analysis as V. epipetala was isolated. These nonpathogens pose a threat to human beings as they may act as Trojan horses for microsporidian parasites and other pathogens, thereby facilitating their transmission to human beings. PMID:26512204

  20. The influence of water quality variables on cyanobacterial blooms and phytoplankton community composition in a shallow temperate lake.

    PubMed

    Lee, Tammy A; Rollwagen-Bollens, Gretchen; Bollens, Stephen M

    2015-06-01

    Cyanobacterial blooms and their detrimental effects on water quality have become a worldwide problem. Vancouver Lake, a tidally influenced shallow temperate freshwater lake in Washington state, U.S.A., exhibits annual summer cyanobacterial blooms that are of concern to local resource managers. Our objectives were to describe changes in phytoplankton community composition in Vancouver Lake over seasonal, annual, and interannual time scales, and to identify strong water quality predictors of phytoplankton community structure, with an emphasis on cyanobacterial blooms, from 2007 through 2010. Cluster analysis, indicator species analysis, and non-metric multidimensional scaling were used to identify significantly different phytoplankton community groupings and to determine which environmental factors influenced community changes. From 2007 through 2009, depletion of NO3-N followed by elevated PO4-P concentration was associated with increased biomass and duration of each cyanobacterial bloom. Time-lag analysis suggested that NO3-N availability contributed to interannual changes within the summer phytoplankton community. Specifically, in summer 2010, a distinct cyanobacteria community was not present, potentially due to increased NO3-N and decreased PO4-P and NH4-N availability. Our study provides a comprehensive assessment of species-level responses to water quality variables in a shallow non-stratifying temperate lake, contributes to a better understanding of phytoplankton dynamics, and may aid in predicting and managing cyanobacterial blooms. PMID:25937495

  1. Conditions for coexistence of freshwater mussel species via partitioning of fish host resources

    USGS Publications Warehouse

    Rashleigh, B.; DeAngelis, D.L.

    2007-01-01

    Riverine freshwater mussel species can be found in highly diverse communities where many similar species coexist. Mussel species potentially compete for food and space as adults, and for fish host resources during the larval (glochidial) stage. Resource partitioning at the larval stage may promote coexistence. A model of resource utilization was developed for two mussel species and analyzed to determine conditions for coexistence. Mussel species were predicted to coexist when they differed in terms of their success in contacting different fish host species; very similar strategies offered limited possibilities for coexistence. Differences in the mussel species' maximum infestation loads on the fish hosts that coincided with differences in their fish host contact success promoted coexistence. Mussel species with a given set of trade-offs in fish host use were predicted to coexist only for a subset of relative fish host abundances, so a shift in relative fish host abundances could result in the loss of a mussel species. An understanding of the conditions for freshwater mussel species coexistence can help explain high mussel diversity in rivers and guide ongoing conservation activities. ?? 2006 Elsevier B.V. All rights reserved.

  2. Using species sensitivity distribution approach to assess the risks of commonly detected agricultural pesticides to Australia's tropical freshwater ecosystems.

    PubMed

    Pathiratne, Asoka; Kroon, Frederieke J

    2016-02-01

    To assess the potential impacts of agricultural pesticides on tropical freshwater ecosystems, the present study developed temperature-specific, freshwater species protection concentrations (i.e., ecotoxicity threshold values) for 8 pesticides commonly detected in Australia's tropical freshwaters. Because relevant toxicity data for native tropical freshwater species to assess the ecological risks were mostly absent, scientifically robust toxicity data obtained at ≥20 °C were used for ecologically relevant taxonomic groups representing primary producers and consumers. Species sensitivity distribution (SSD) curves were subsequently generated for predicted chronic exposure using Burrlioz 2.0 software with mixed chronic and converted acute data relevant to exposure conditions at ≥20 °C. Ecotoxicity threshold values for tropical freshwater ecosystem protection were generated for ametryn, atrazine, diuron, metolachlor, and imidacloprid (all moderate reliability), as well as simazine, hexazinone, and tebuthiuron (all low reliability). Using these SSD curves, the retrospective risk assessments for recently reported pesticide concentrations highlight that the herbicides ametryn, atrazine, and diuron are of major concern for ecological health in Australia's tropical freshwater ecosystems. The insecticide imidacloprid also appears to pose an emerging threat to the most sensitive species in tropical freshwater ecosystems. The exposed temperature-specific approach may be applied to develop water quality guideline values for other environmental contaminants detected in tropical freshwater ecosystems until reliable and relevant toxicity data are generated using representative native species. PMID:26260635

  3. Environmental heterogeneity predicts species richness of freshwater mollusks in sub-Saharan Africa

    NASA Astrophysics Data System (ADS)

    Hauffe, T.; Schultheiß, R.; Van Bocxlaer, B.; Prömmel, K.; Albrecht, C.

    2014-12-01

    Species diversity and how it is structured on a continental scale is influenced by stochastic, ecological, and evolutionary driving forces, but hypotheses on determining factors have been mainly examined for terrestrial and marine organisms. The extant diversity of African freshwater mollusks is in general well assessed to facilitate conservation strategies and because of the medical importance of several taxa as intermediate hosts for tropical parasites. This historical accumulation of knowledge has, however, not resulted in substantial macroecological studies on the spatial distribution of freshwater mollusks. Here, we use continental distribution data and a recently developed method of random and cohesive allocation of species distribution ranges to test the relative importance of various factors in shaping species richness of Bivalvia and Gastropoda. We show that the mid-domain effect, that is, a hump-shaped richness gradient in a geographically bounded system despite the absence of environmental gradients, plays a minor role in determining species richness of freshwater mollusks in sub-Saharan Africa. The western branch of the East African Rift System was included as dispersal barrier in richness models, but these simulation results did not fit observed diversity patterns significantly better than models where this effect was not included, which suggests that the rift has played a more complex role in generating diversity patterns. Present-day precipitation and temperature explain richness patterns better than Eemian climatic condition. Therefore, the availability of water and energy for primary productivity during the past does not influence current species richness patterns much, and observed diversity patterns appear to be in equilibrium with contemporary climate. The availability of surface waters was the best predictor of bivalve and gastropod richness. Our data indicate that habitat diversity causes the observed species-area relationship, and hence, that

  4. Assessing exposure risks for freshwater tilapia species posed by mercury and methylmercury.

    PubMed

    Cheng, Yi-Hsien; Lin, Yi-Jun; You, Shu-Han; Yang, Ying-Fei; How, Chun Ming; Tseng, Yi-Ting; Chen, Wei-Yu; Liao, Chung-Min

    2016-08-01

    Waterborne and dietborne exposures of freshwater fish to mercury (Hg) in the forms of inorganic (Hg(II)) and organic (methylmercury or MeHg) affect their growth, development, and reproduction. However, an integrated mechanistic risk model framework to predict the impact of Hg(II)/MeHg on freshwater fish is lacking. Here, we integrated biokinetic, physiological and biogeographic data to calibrate and then establish key risk indices-hazardous quotient and exceedance risk-for freshwater tilapia species across geographic ranges of several major rivers in Taiwan. We found that Hg(II) burden was highest in kidney followed by gill, intestine, liver, blood, and muscle. Our results showed that Hg was less likely to pose mortality risk (mortality rate less than 5 %) for freshwater tilapia species. However, Hg is likely to pose the potential hazard to aquatic environments constrained by safety levels for aquatic organisms. Sensitivity analysis showed that amount of Hg accumulated in tilapia was most influenced by sediment uptake rate. Our approach opens up new possibilities for predicting future fish population health with the impacts of continued Hg exposure to provide information on which fish are deemed safe for human consumption. PMID:27207496

  5. Rhinebothrium jaimei sp. n. (Eucestoda: Rhinebothriidea: Rhinebothriidae): a new species from Neotropical freshwater stingrays (Potamotrygonidae).

    PubMed

    Marques, Fernando P L; Reyda, Florian B

    2015-01-01

    Neotropical freshwater stingrays (Batoidea: Potamotrygonidae) host a diversity of parasites, including some, like their hosts, that are marine-derived. Among the parasites of potamotrygonids, the cestode fauna is the most diverse, with multiple genera having been reported, including genera endemic to the freshwaters of the Neotropics and genera that have cosmopolitan distributions. Recent efforts have been made to document the diversity of cestodes of this host-parasite system and to refine the taxonomy of parasite lineages. The present study contributes to our knowledge of Rhinebothrium Linton, 1890, a diverse cosmopolitan genus of rhinebothriidean cestode, with 37 species reported from marine batoids, one species from a freshwater stingray in Borneo and six species from potamotrygonids. Rhinebothrium jaimei sp. n. is described from two species of potamotrygonids, Potamotrygon orbignyi (Castelnau) (type host) and Potamotrygon scobina Garman, from Bahía de Marajó of the lower Amazon region. It can be distinguished from most of its marine congeners via multiple attributes, including its possession of two, rather than one, posteriormost loculi on its bothridia and the lomeniform shape of its bothridium that is wider anteriorly. In addition, R. jaimei sp. n. can be distinguished from the six Rhinebothrium species described previously from potamotrygonids based on a unique combination of morphological features. Despite extensive stingray cestode sampling efforts throughout all major Neotropical river systems, we found that unlike most species of potamotrygonid Rhinebothrium species, which are widespread, R. jaimei sp. n. is restricted to the Bahía de Marajó. The discovery of this new species of Rhinebothrium in Bahía de Marajó, an area in which potamotrygonids occur sympatrically with some species of euryhaline batoids (e.g. Dasyatis spp.) and share some trophic resources, suggest that modern ecological processes may be contributing to the distribution patterns

  6. Chemical analysis of endolymph and the growing otolith: fractionation of metals in freshwater fish species.

    PubMed

    Melancon, Sonia; Fryer, Brian J; Markham, James L

    2009-06-01

    The fractionation of metals from water to otolith is an area of research that has received relatively limited attention, especially in freshwater systems. The objectives of the present research were to study the metal partitioning between otolith and endolymph of two freshwater species: Lake trout (Salvelinus namaycush), and burbot (Lota lota). We also included the chemical analyses of water and blood from fish of the same species collected in the same area but during different years. These results provide insight regarding the partition of metals between water and fish. This is one of the first studies to provide a range of trace metal concentrations for endolymph and the growing otolith (both aragonite and vaterite) and to directly measure otolith-endolymph partition coefficients for freshwater fish. The trace elements (Mg, Sr, and Ba) most often used as otolith elemental tracers were the ones with the lowest uptake from water to blood. We found that endolymph and whole blood had similar metal concentrations, with Mg and Fe being the only elements enriched in whole blood. Results showed few significant differences in trace metal content between wild lake trout and burbot endolymph (except for K, Mg, and Ba), but significant differences existed between their aragonitic otoliths. These results suggest two different crystallization processes in these species or the presence of different proteins (and/or organic matrices) that would selectively influence elemental incorporation in the otoliths. PMID:19154085

  7. Diversification and Species Boundaries of Rhinebothrium (Cestoda; Rhinebothriidea) in South American Freshwater Stingrays (Batoidea; Potamotrygonidae)

    PubMed Central

    Reyda, Florian B.; Marques, Fernando P. L.

    2011-01-01

    Background Neotropical freshwater stingrays (Batoidea: Potamotrygonidae) host a diverse parasite fauna, including cestodes. Both cestodes and their stingray hosts are marine-derived, but the taxonomy of this host/parasite system is poorly understood. Methodology Morphological and molecular (Cytochrome oxidase I) data were used to investigate diversity in freshwater lineages of the cestode genus Rhinebothrium Linton, 1890. Results were based on a phylogenetic hypothesis for 74 COI sequences and morphological analysis of over 400 specimens. Cestodes studied were obtained from 888 individual potamotrygonids, representing 14 recognized and 18 potentially undescribed species from most river systems of South America. Results Morphological species boundaries were based mainly on microthrix characters observed with scanning electron microscopy, and were supported by COI data. Four species were recognized, including two redescribed (Rhinebothrium copianullum and R. paratrygoni), and two newly described (R. brooksi n. sp. and R. fulbrighti n. sp.). Rhinebothrium paranaensis Menoret & Ivanov, 2009 is considered a junior synonym of R. paratrygoni because the morphological features of the two species overlap substantially. The diagnosis of Rhinebothrium Linton, 1890 is emended to accommodate the presence of marginal longitudinal septa observed in R. copianullum and R. brooksi n. sp. Patterns of host specificity and distribution ranged from use of few host species in few river basins, to use of as many as eight host species in multiple river basins. Significance The level of intra-specific morphological variation observed in features such as total length and number of proglottids is unparalleled among other elasmobranch cestodes. This is attributed to the large representation of host and biogeographical samples. It is unclear whether the intra-specific morphological variation observed is unique to this freshwater system. Nonetheless, caution is urged when using morphological

  8. SIMULTANEOUS MULTIPLE SPECIES TESTING: ACUTE TOXICITY OF 13 CHEMICALS TO 12 DIVERSE FRESHWATER AMPHIBIAN, FISH, AND INVERTEBRATE FAMILIES

    EPA Science Inventory

    The test series developed methods for testing a compliment of aquatic organisms in a single test that satisfies the freshwater acute toxicity requirements for setting water quality criteria. Species tested included fathead minnows Pimephales promelas, rainbow trout Salmo gairdner...

  9. Concentrations of microcystins in tissues of several fish species from freshwater reservoirs and ponds.

    PubMed

    Kopp, Radovan; Palíková, Miroslava; Adamovský, Ondřej; Ziková, Andrea; Navrátil, Stanislav; Kohoutek, Jiří; Mareš, Jan; Bláha, Luděk

    2013-12-01

    The aim of this study is to summarise the determination of concentrations of microcystins (MCs) in muscle and liver of freshwater fish species caught in stagnant waters of the Czech Republic. Within the years 2007-2009, 351 muscle samples and 291 liver samples of 16 freshwater fish species derived from four fishponds, and four water reservoirs were analysed. MCs were detected in 53 liver samples. The highest concentrations of microcystins were determined in liver samples of carnivorous fish species; 50.3 ng/g of fresh weight (FW) in perch (Perca fluviatilis) and 22.7 ng/g FW in pikeperch (Sander lucioperca). MCs in liver were detected in other five fish species; asp (Aspius aspius), pike (Esox lucius), common carp (Cyprinus carpio), grass carp (Ctenopharyngodon idella) and European eel (Anguilla anguilla). Concentrations of MCs in liver of nine fish species (European bream, whitefish, tench, silver carp, European catfish, roach, chub, crucian carp and rudd) were below the detection limit of 1.2-5.4 ng/g FW for different MC congeners. However, the concentrations of MCs in all muscle samples were below the detection limit. The assessment of MCs concentrations might be influenced by the detection method used. Due to the concentrations of MCs being below the detection limit in muscle samples of all fish species analysed, it seems that there might be a low potential threat for human health in case of fish muscle consumption. PMID:23756815

  10. New cystidicolid species (Nematoda) from Galaxias platei (Osmeriformes: Galaxiidae) in Patagonian freshwater environments.

    PubMed

    Brugni, Norma L; Viozzi, Gustavo P

    2008-08-01

    During a parasitological survey of Galaxias platei Steindachner, 1898, from Patagonian Andean Lakes, a new species of Cystidicolidae was found in the stomach of fish. The new species was described using light and scanning electron microscopy; the species has characteristics of Ascarophis and is distinguishable from other species by a combination of the following features: well-developed pseudolabia with T-shaped inner extensions, bifurcate deirids, small ratio GE:ME, small left spicule, small ratio LS:RS, and larvigerous eggs with thick and fine filaments in both poles. Intraspecific variation in the morphology of larvigerous eggs was studied. This is the first species of Ascarophis described from freshwater fishes. PMID:18576739

  11. Two new species of freshwater flatworms (Platyhelminthes: Tricladida: Continenticola) from South American caves.

    PubMed

    Souza, Stella; Morais, Ana Laura; Bichuette, Maria Elina; Leal-Zanchet, Ana

    2016-01-01

    The diversity of freshwater triclads in the Neotropical region is considered to be low, but extensive areas of South America remain almost unexplored. Herein we describe two cave-dwelling, new species of Girardia, one from a transition zone of the Cerrado and Caatinga phytophysiognomies and the other from the Cerrado phytophysiognomy. The species from the Cerrado-Caatinga transition is a troglobite, eyeless and whitish; the species from the Cerrado area is possibly a troglophile, since it shows heavily pigmented body and eyes. Each species is easily recognized by a unique combination of features in its external morphology and copulatory apparatus. The two new species of Girardia show a restricted distribution, even the troglophile, and occur in caves without legal protection. Therefore, they must be considered as vulnerable organisms in a conservation context. PMID:27394369

  12. Can Species Distribution Models Aid Bioassessment when Reference Sites are Lacking? Tests Based on Freshwater Fishes

    NASA Astrophysics Data System (ADS)

    Labay, Ben J.; Hendrickson, Dean A.; Cohen, Adam E.; Bonner, Timothy H.; King, Ryan S.; Kleinsasser, Leroy J.; Linam, Gordon W.; Winemiller, Kirk O.

    2015-10-01

    Recent literature reviews of bioassessment methods raise questions about use of least-impacted reference sites to characterize natural conditions that no longer exist within contemporary landscapes. We explore an alternate approach for bioassessment that uses species site occupancy data from museum archives as input for species distribution models (SDMs) stacked to predict species assemblages of freshwater fishes in Texas. When data for estimating reference conditions are lacking, deviation between richness of contemporary versus modeled species assemblages could provide a means to infer relative biological integrity at appropriate spatial scales. We constructed SDMs for 100 freshwater fish species to compare predicted species assemblages to data on contemporary assemblages acquired by four independent surveys that sampled 269 sites. We then compared site-specific observed/predicted ratios of the number of species at sites to scores from a multimetric index of biotic integrity (IBI). Predicted numbers of species were moderately to strongly correlated with the numbers observed by the four surveys. We found significant, though weak, relationships between observed/predicted ratios and IBI scores. SDM-based assessments identified patterns of local assemblage change that were congruent with IBI inferences; however, modeling artifacts that likely contributed to over-prediction of species presence may restrict the stand-alone use of SDM-derived patterns for bioassessment and therefore warrant examination. Our results suggest that when extensive standardized survey data that include reference sites are lacking, as is commonly the case, SDMs derived from generally much more readily available species site occupancy data could be used to provide a complementary tool for bioassessment.

  13. Synopsis of valid species-group taxa for freshwater Gastropoda recorded from the European Neogene

    PubMed Central

    Neubauer, Thomas A.; Kroh, Andreas; Harzhauser, Mathias; Georgopoulou, Elisavet; Mandic, Oleg

    2014-01-01

    Abstract Here we present a complete list of all valid species-group taxa of freshwater gastropods reported from Miocene and Pliocene deposits in Europe. The last comparable work dates back to the 1920s and covered about 1,600 names. The extensive literature research underlying the present work revealed considerable changes in the taxonomic and systematic frameworks of Neogene freshwater gastropods and yielded a total number of 2,156 accepted taxa. Each taxon is accompanied by a full citation of its first description; where the information is available, page number and illustration reference are provided. First descriptions available as open-access full-text sources on the web were linked via hyperlink to the first page of the publication. PMID:25152683

  14. Freshwater gastropods diversity hotspots: three new species from the Uruguay River (South America)

    PubMed Central

    de Lucía, Micaela

    2016-01-01

    Background: The Atlantic Forest is globally one of the priority ecoregions for biodiversity conservation. In Argentina, it is represented by the Paranense Forest, which covers a vast area of Misiones Province between the Paraná and Uruguay rivers. The Uruguay River is a global hotspot of freshwater gastropod diversity, here mainly represented by Tateidae (genus Potamolithus) and to a lesser extent Chilinidae. The family Chilinidae (Gastropoda, Hygrophila) includes 21 species currently recorded in Argentina, and three species in the Uruguay River. The species of Chilinidae occur in quite different types of habitats, but generally in clean oxygenated water recording variable temperature ranges. Highly oxygenated freshwater environments (waterfalls and rapids) are the most vulnerable continental environments. We provide here novel information on three new species of Chilinidae from environments containing waterfalls and rapids in the Uruguay River malacological province of Argentina. Materials and Methods: The specimens were collected in 2010. We analyzed shell, radula, and nervous and reproductive systems, and determined the molecular genetics. The genetic distance was calculated for two mitochondrial markers (cytochrome c oxidase subunit I–COI- and cytochrome b -Cyt b-) for these three new species and the species recorded from the Misionerean, Uruguay River and Lower Paraná-Río de la Plata malacological provinces. In addition, the COI data were analyzed phylogenetically by the neighbor-joining and Bayesian inference techniques. Results: The species described here are different in terms of shell, radula and nervous and reproductive systems, mostly based on the sculpture of the penis sheath. Phylogenetic analyses grouped the three new species with those present in the Lower Paraná-Río de la Plata and Uruguay River malacological provinces. Discussion: Phylogenetic analyses confirm the separation between the Uruguay River and the Misionerean malacological

  15. Species-specific and transgenerational responses to increasing salinity in sympatric freshwater gastropods

    USGS Publications Warehouse

    Suski, Jamie G.; Salice, Christopher J.; Patino, Reynaldo

    2012-01-01

    Freshwater salinization is a global concern partly attributable to anthropogenic salt contamination. The authors examined the effects of increased salinity (as NaCl, 250-4,000 µS/cm, specific conductance) on two sympatric freshwater gastropods (Helisoma trivolvis and Physa pomillia). Life stage sensitivities were determined by exposing naive eggs or naive juveniles (through adulthood and reproduction). Additionally, progeny eggs from the juvenile-adult exposures were maintained at their respective parental salinities to examine transgenerational effects. Naive H. trivolvis eggs experienced delayed development at specific conductance > 250 µS/cm; reduced survivorship and reproduction were also seen in juvenile H. trivolvis at 4,000 µS/cm. Survival and growth of P. pomilia were not affected by increased salinity following egg or juvenile exposures. Interestingly, the progeny of H. trivolvis exposed to higher salinity may have gained tolerance to increased salinity whereas P. pomilia progeny may have experienced negative transgenerational effects. The present study demonstrates that freshwater snail species vary in their tolerance to salinization and also highlights the importance of multigenerational studies, as stressor impacts may not be readily apparent from shorter term exposures.

  16. Species-specific and transgenerational responses to increasing salinity in sympatric freshwater gastropods.

    PubMed

    Suski, Jamie G; Salice, Christopher J; Patiño, Reynaldo

    2012-11-01

    Freshwater salinization is a global concern partly attributable to anthropogenic salt contamination. The authors examined the effects of increased salinity (as NaCl, 250-4,000 µS/cm, specific conductance) on two sympatric freshwater gastropods (Helisoma trivolvis and Physa pomillia). Life stage sensitivities were determined by exposing naive eggs or naive juveniles (through adulthood and reproduction). Additionally, progeny eggs from the juvenile-adult exposures were maintained at their respective parental salinities to examine transgenerational effects. Naive H. trivolvis eggs experienced delayed development at specific conductance > 250 µS/cm; reduced survivorship and reproduction were also seen in juvenile H. trivolvis at 4,000 µS/cm. Survival and growth of P. pomilia were not affected by increased salinity following egg or juvenile exposures. Interestingly, the progeny of H. trivolvis exposed to higher salinity may have gained tolerance to increased salinity whereas P. pomilia progeny may have experienced negative transgenerational effects. The present study demonstrates that freshwater snail species vary in their tolerance to salinization and also highlights the importance of multigenerational studies, as stressor impacts may not be readily apparent from shorter term exposures. PMID:22865709

  17. Is the freshwater gammarid, Dikerogammarus villosus, a suitable sentinel species for the implementation of histochemical biomarkers?

    PubMed

    Guerlet, Edwige; Ledy, Karine; Giambérini, Laure

    2008-06-01

    In order to enlarge the range of potential sentinel species for the implementation of a multiple biomarker approach, spatial and monthly morphological variations of four cellular compartments and contents were assessed during two years in the hepatopancreatic caeca of the freshwater gammarid, Dikerogammarus villosus (Crustacea, Amphipoda), using histochemistry coupled to image analysis. Among the three study sites, the second one, located in a reservoir receiving the overheated and copper-contaminated waters of a nuclear power plant, was the most anthropised. During this passive biomonitoring survey, unsaturated neutral lipids were more abundant, the surface densities of the lysosomal and peroxisomal systems were, respectively less and more important, and lipofuscin granules tended to accumulate in the amphipods from the second site compared to both others. Nonetheless, in this context, the present cellular biomarker suite, analysed through an integrative approach, was not powerful enough to highlight spatial heterogeneity significantly. This may partly result from particularities in the patterns of metal accumulation and copper physiological requirements of amphipods (haemocyanin synthesis). Nevertheless, we think that the use of this Ponto-Caspian non-indigenous species in biomonitoring surveys deserves further investigation, owing to its current position in freshwater and brackish European ecosystems, considering both biomass and functioning. Cellular responses could be studied in parallel with endpoints at other levels of the biological organization to compose a more powerful biomarker suite. Furthermore, comparing biological responses to environmental stress in this invasive species and less competitive autochthonous gammarids could be of great interest. PMID:18499217

  18. Isolation and characterisation of flavobacteria from wild and cultured freshwater fish species in Hungary.

    PubMed

    Varga, Zsuzsanna; Sellyei, Boglárka; Paulus, Petra; Papp, Melitta; Molnár, Kálmán; Székely, Csaba

    2016-03-01

    The objective of this study was to survey the incidence of Flavobacterium columnare in wild and cultured freshwater fish species in Hungary. This bacterium usually causes disease in waters of more than 25 °C temperature. However, with the introduction of intensive fish farming systems, infected fish exposed to stress develop disease signs also at lower temperatures; in addition, the temperature of natural waters rises to the critical level due to global warming. Twenty-five isolates from wild and cultured freshwater fishes were identified as F. columnare by specific PCR, although both the fragment lengths and the results of PCRRFLP genotyping with BsuRI (HaeIII) and RsaI restriction enzymes raised doubts regarding this species classification. Sequencing of the 16S ribosomal RNA gene revealed that 23 isolates belonged to the species F. johnsoniae and two represented Chryseobacterium spp. The isolates were found to have high-level multidrug resistance: all were resistant to ampicillin and polymyxin B, the 23 F. johnsoniae strains to cotrimoxazole, 88% of them to gentamicin, and 72% to chloramphenicol. The majority of the 25 isolates were sensitive to erythromycin (88%), furazolidone (76%), and florfenicol (68%). PMID:26919138

  19. Fish species introductions provide novel insights into the patterns and drivers of phylogenetic structure in freshwaters.

    PubMed

    Strecker, Angela L; Olden, Julian D

    2014-03-01

    Despite long-standing interest of terrestrial ecologists, freshwater ecosystems are a fertile, yet unappreciated, testing ground for applying community phylogenetics to uncover mechanisms of species assembly. We quantify phylogenetic clustering and overdispersion of native and non-native fishes of a large river basin in the American Southwest to test for the mechanisms (environmental filtering versus competitive exclusion) and spatial scales influencing community structure. Contrary to expectations, non-native species were phylogenetically clustered and related to natural environmental conditions, whereas native species were not phylogenetically structured, likely reflecting human-related changes to the basin. The species that are most invasive (in terms of ecological impacts) tended to be the most phylogenetically divergent from natives across watersheds, but not within watersheds, supporting the hypothesis that Darwin's naturalization conundrum is driven by the spatial scale. Phylogenetic distinctiveness may facilitate non-native establishment at regional scales, but environmental filtering restricts local membership to closely related species with physiological tolerances for current environments. By contrast, native species may have been phylogenetically clustered in historical times, but species loss from contemporary populations by anthropogenic activities has likely shaped the phylogenetic signal. Our study implies that fundamental mechanisms of community assembly have changed, with fundamental consequences for the biogeography of both native and non-native species. PMID:24452027

  20. Fish species introductions provide novel insights into the patterns and drivers of phylogenetic structure in freshwaters

    PubMed Central

    Strecker, Angela L.; Olden, Julian D.

    2014-01-01

    Despite long-standing interest of terrestrial ecologists, freshwater ecosystems are a fertile, yet unappreciated, testing ground for applying community phylogenetics to uncover mechanisms of species assembly. We quantify phylogenetic clustering and overdispersion of native and non-native fishes of a large river basin in the American Southwest to test for the mechanisms (environmental filtering versus competitive exclusion) and spatial scales influencing community structure. Contrary to expectations, non-native species were phylogenetically clustered and related to natural environmental conditions, whereas native species were not phylogenetically structured, likely reflecting human-related changes to the basin. The species that are most invasive (in terms of ecological impacts) tended to be the most phylogenetically divergent from natives across watersheds, but not within watersheds, supporting the hypothesis that Darwin's naturalization conundrum is driven by the spatial scale. Phylogenetic distinctiveness may facilitate non-native establishment at regional scales, but environmental filtering restricts local membership to closely related species with physiological tolerances for current environments. By contrast, native species may have been phylogenetically clustered in historical times, but species loss from contemporary populations by anthropogenic activities has likely shaped the phylogenetic signal. Our study implies that fundamental mechanisms of community assembly have changed, with fundamental consequences for the biogeography of both native and non-native species. PMID:24452027

  1. Competitive Effects of Calcium and Magnesium Ions on the Photochemical Transformation and Associated Cellular Uptake of Iron by the Freshwater Cyanobacterial Phytoplankton Microcystis aeruginosa.

    PubMed

    Fujii, Manabu; Yeung, Anna C Y; Waite, T David

    2015-08-01

    Photochemical reduction of iron and iron uptake by Microcystis were investigated in a freshwater medium (pH 8) containing a range of calcium (Ca) and magnesium (Mg) ion concentrations (0.002-20 mM). In a medium containing the chelator ethylenediaminetetraacetic acid (EDTA), 50-fold increases in net photochemical formation rates of unchelated ferrous iron (Fe(II)') were observed as the concentration of calcium or magnesium metal (Me) was increased to exceed the concentration of EDTA. Kinetic modeling of iron transformation processes indicated that the facilitated Fe(II)' formation is attributed to Me-promoted photoreductive dissociation of the ferric iron-EDTA complex. In the medium containing Suwanee River fulvic acid, in contrast, the competitive effect of Me on photochemical Fe(II)' formation appears to be negligible due to the weak binding affinities of fulvic acid to Me. The cellular iron uptake rate in the EDTA-buffered system increased by ∼3-fold in the excess Me condition where the increased rate of photochemical Fe(II)' formation was observed, whereas the presence of Me resulted in a decrease in iron uptake rate in the fulvic acid system (by up to 5-fold). The decrease in iron uptake is likely caused by Me binding to iron transporters and other entities involved in intracellular iron transport. The findings of this study indicate a significant effect of Ca and Mg concentrations in natural waters on iron uptake by Microcystis, with the magnitude of effect depending strongly on ligand type. PMID:26132788

  2. New species and new records of freshwater Heterolepidoderma (Gastrotricha: Chaetonotidae) from Brazil with an identification key to the genus.

    PubMed

    Garraffoni, André R S; Melchior, Marina P

    2015-01-01

    A new species of freshwater Heterolepidoderma (Gastrotricha) was found in Brazil. Heterolepidoderma mariae sp. nov. is unique in possessing a three-lobed head, three types of dorsal keeled scales, a thin band of cilia on the head, connecting the two bands of ventral cilia, and an interciliary area with elliptical keeled scales with short spines. Heterolepidoderma famaillense Grosso & Drahg, 1991 is reported for the first time outside the type locality in Argentina, and we make some initial remarks on H. aff. majus Remane, 1927, a possible undescribed species. A dichotomous key for all freshwater species of Heterolepidoderma , with distributional data, is also provided. PMID:26701498

  3. Gene trees versus species trees: reassessing life-history evolution in a freshwater fish radiation.

    PubMed

    Waters, Jonathan M; Rowe, Diane L; Burridge, Christopher P; Wallis, Graham P

    2010-10-01

    Mechanisms of speciation are best understood in the context of phylogenetic relationships and as such have often been inferred from single gene trees, typically those derived from mitochondrial DNA (mtDNA) markers. Recent studies, however, have noted the potential for phylogenetic discordance between gene trees and underlying species trees (e.g., due to stochastic lineage sorting, introgression, or selection). Here, we employ a variety of nuclear DNA loci to reassess evolutionary relationships within a recent freshwater fish radiation to reappraise modes of speciation. New Zealand's freshwater-limited Galaxias vulgaris complex is thought to have evolved from G. brevipinnis, a widespread migratory species that retains a plesiomorphic marine juvenile phase. A well-resolved tree, based on four mtDNA regions, previously suggested that marine migratory ability has been lost on 3 independent occasions in the evolution of this species flock (assuming that loss of diadromy is irreversible). Here, we use pseudogene (galaxiid Numt: 1801 bp), intron (S: 903 bp), and exon (RAG-1: 1427 bp) markers, together with mtDNA, to reevaluate this hypothesis of parallel evolution. Interestingly, partitioned Bayesian analysis of concatenated nuclear sequences (3141 bp) and concatenated nuclear and mtDNA (4770 bp) both recover phylogenies implying a single loss of diadromy, not three parallel losses as previously inferred from mtDNA alone. This phylogenetic result is reinforced by a multilocus analysis performed using Bayesian estimation of species trees (BEST) software that estimates the posterior distribution of species trees under a coalescent model. We discuss factors that might explain the apparently misleading phylogenetic inferences generated by mtDNA. PMID:20603441

  4. Extensive Dark Biological Production of Reactive Oxygen Species in Brackish and Freshwater Ponds.

    PubMed

    Zhang, Tong; Hansel, Colleen M; Voelker, Bettina M; Lamborg, Carl H

    2016-03-15

    Within natural waters, photodependent processes are generally considered the predominant source of reactive oxygen species (ROS), a suite of biogeochemically important molecules. However, recent discoveries of dark particle-associated ROS production in aquatic environments and extracellular ROS production by various microorganisms point to biological activity as a significant source of ROS in the absence of light. Thus, the objective of this study was to explore the occurrence of dark biological production of the ROS superoxide (O2(-)) and hydrogen peroxide (H2O2) in brackish and freshwater ponds. Here we show that the ROS superoxide and hydrogen peroxide were present in dark waters at comparable concentrations as in sunlit waters. This suggests that, at least for the short-lived superoxide species, light-independent processes were an important control on ROS levels in these natural waters. Indeed, we demonstrated that dark biological production of ROS extensively occurred in brackish and freshwater environments, with greater dark ROS production rates generally observed in the aphotic relative to the photic zone. Filtering and formaldehyde inhibition confirmed the biological nature of a majority of this dark ROS production, which likely involved phytoplankton, particle-associated heterotrophic bacteria, and NADH-oxidizing enzymes. We conclude that biological ROS production is widespread, including regions devoid of light, thereby expanding the relevance of these reactive molecules to all regions of our oxygenated global habit. PMID:26854358

  5. Comparison of two freshwater turtle species as monitors of environmental contamination

    SciTech Connect

    Meyers-Schoene, L. ); Walton, B.T. )

    1990-04-01

    Two species of turtles that occupy different ecological niches were compared for their usefulness as monitors of contamination in freshwater ecosystems. Trachemys scripta (Agassiz) and Chelydra serpentina (Linnaeus) were selected for comparison based on species abundance and differences in food habits and sediment contact. A review of the literature on contaminants in turtles and results of preliminary surveys conducted at the field sites, which are included in this study, were used to direct and focus this research project. White Oak Lake, a settling basin for low-level radioactive and nonradioactive contaminants, and Bearden Creek Embayment, an uncontaminated reference site upriver, were used as study sites in the investigation of turtles as indicators of chemical contamination. Turtles were analyzed for concentrations of strontium-90, cesium-137, cobalt 60, and mercury in specific target tissues, and for single-stranded DNA breaks, a non-specific indicator of possible exposure to genotoxic agents in the environment. 133 refs., 2 figs., 15 tabs.

  6. New and previously described species of Dactylogyridae (Monogenoidea) from the gills of Panamanian freshwater fishes (Teleostei).

    PubMed

    Mendoza-Franco, Edgar F; Aguirre-Macedo, M Leopoldina; Vidal-Martínez, Victor M

    2007-08-01

    During an investigation of the diversity of metazoan parasites of 7 freshwater fish species from 3 localities in central Panama, the following gill dactylogyrid (Monogenoidea) species were found: Aphanoblastella chagresii n. sp. from Pimelodella chagresi (Heptapteridae); Aphanoblastella travassosi (Price, 1938) Kritsky, Mendoza-Franco, and Scholz, 2000 from Rhamdia quelen (Heptapteridae); Diaphorocleidus petrosusi n. sp. from Brycon petrosus (Characidae); Gussevia asota Kritsky, Thatcher, and Boeger, 1989, from Astronotus ocellatus (Cichlidae); Sciadicleithrum panamensis n. sp. from Aequidens coeruleopunctatus (Cichlidae); Urocleidoides flegomai n. sp. from Piabucina panamensis (Lebiasinidae); and Urocleidoides similuncus n. sp. from Poecilia gillii (Poeciliidae). Consideration of the comparative morphology and distribution of these parasites along with the evolutionary history of the host fishes suggests that diversification may be associated with geotectonic events that provided isolation of the Central American fauna with the uplift of the Panamanian Isthmus during early Pliocene (3 mya). PMID:17918354

  7. Extraction of cyanobacterial endotoxin.

    PubMed

    Papageorgiou, John; Linke, Thomas A; Kapralos, Con; Nicholson, Brenton C; Steffensen, Dennis A

    2004-02-01

    To simplify our efforts in acquiring toxicological information on endotoxins produced by cyanobacteria, a method development study was undertaken to identify relatively hazard-free and efficient procedures for their extraction. One article sourced and two novel methods were evaluated for their ability to extract lipopolysaccharides (LPSs) or endotoxins from cyanobacteria. The Limulus polyphemus amoebocyte lysate (LAL) assay was employed to compare the performance of a novel method utilizing a 1-butanol-water (HBW) solvent system to that of Westphal's (1965) phenol-water system (HPW) for the extraction of endotoxin from various cyanobacteria. The traditional HPW method extracted from 3- to 12-fold more endotoxin from six different cyanobacterial blooms and culture materials than did the novel HBW method. In direct contrast, the novel HBW method extracted ninefold more endotoxin from a non-microcystin producing Microcystis aeruginosa culture as compared to the HPW method. A solvent system utilizing N,N'-dimethylformamide-water (HDW) was compared to both the HPW and HBW methods for the extraction of endotoxin from natural samples of Anabaena circinalis, Microcystis flos-aquae, and a 1:1 mixture of Microcystis aeruginosa/Microcystisflos-aquae. The LAL activities of these extracts showed that the novel HDW method extracted two- and threefold more endotoxin from the Anabaena sample that did the HBW and HPW methods, respectively. The HDW method also extracted approximately 1.5-fold more endotoxin from the Microcystis flos-aquae sample as compared to both the HBW and HPW methods. On the other hand, the HBW method extracted 2- and 14-fold more endotoxin from the Microcystis flos-aquae/Microcystis aeruginosa mixture than did the HPW and HDW methods, respectively. Results of this study demonstrate that significant disparities exist between the physicochemical properties of the cell wall constituents not only of different cyanobacterial species but also of different strains of

  8. Could the presence of larger fractions of non-cyanobacterial species be used as a predictor of microcystin production under variable nutrient regimes?

    PubMed

    Sinang, Som Cit; Reichwaldt, Elke S; Ghadouani, Anas

    2015-07-01

    The occurrence of cyanobacteria and microcystin is highly dynamic in natural environments and poses one of the biggest challenges to water resource management. While a number of drivers are known to be responsible for the occurrence of cyanobacterial blooms, the drivers of microcystin production are not adequately known. This study aims to quantify the effects of the changes in the structures of phytoplankton and cyanobacterial communities on the dynamics of microcystin production under highly variable nutrient concentration. In our study, nutrient variability could explain 64% of the variability in microcystin production. When changes in the fractions of non-cyanobacteria versus cyanobacteria genera were additionally included, 80% of the variability in microcystin production could be explained; under high nutrient concentrations, non-cyanobacterial phytoplankton groups were dominant over cyanobacteria and cyanobacteria produced more toxins. In contrast, changes in the cyanobacterial community structures could only explain a further 4% of the dynamics of microcystin production. As such, the dominance of non-cyanobacterial groups appears to be a useful factor to explain microcystin occurrence in addition to traditionally used factors such as absolute cyanobacterial cell numbers, especially when the nutrient regime is taken into account. This information could help to further refine the risk assessment frameworks which are currently used to manage the risk posed by cyanobacterial blooms. PMID:26122127

  9. Phylogeography of Cambarus tenebrosus: a Facultative Cave-Dwelling Freshwater Crayfish Species.

    NASA Astrophysics Data System (ADS)

    Finlay, J.; Buhay, J. E.; Crandall, K. A.

    2005-05-01

    Cambarus tenebrosus is a unique freshwater crayfish species, inhabiting both subterranean and surface habitats in southeastern United States. This facultative cave-dweller is found in all aquatic karst areas within its range, including deep pits, massive underground rivers, springs, and surface streams, which makes this species ideal for a phylogeographic study. The objectives of our research are to: 1.) determine if C. tenebrosus is a single lineage or represents multiple cryptic species using phylogenetic methods, 2.) evaluate the evolutionary history and current gene flow patterns of C. tenebrosus using Nested Clade Analysis, and 3.) assess genetic diversity and conservation status of the species. We have gathered molecular genetic data from over 300 individuals from cave and surface environments across the entire range, with focus on the Cumberland Plateau from Kentucky to Alabama. Preliminary findings suggest that there are several clades of C. tenebrosus, but these clades geographically overlap in many areas. There is also no association between genetics and habitat (surface vs. subsurface), suggesting that there is gene flow between the two environment types. The origin of the species appears to be around Western Kentucky and Indiana, which then expanded southward down the Cumberland Plateau.

  10. Sperm quality and cryopreservation of Brazilian freshwater fish species: a review.

    PubMed

    Viveiros, A T M; Godinho, H P

    2009-03-01

    The Brazilian freshwater fish diversity is the richest in the world. Only 0.7% of all Brazilian species have had any aspect of their sperm biology addressed up to this date. The majority of the fish species described in this review migrate during the spawning season (a phenomenon known as piracema). Urbanization, pollution, hydroelectric dams and deforestation are some of the causes of stock depletion or even local extinction of some of these species. The knowledge concerning sperm quality and minimum sperm:egg ratio is important to maximize the use of males without reducing hatching rates. Furthermore, sperm cryopreservation and gene banking can guarantee the conservation of genetic diversity and development of adequate breeding programs of native fish species. In this review, we present and evaluate the existing information on Brazilian fish species that have been subject to sperm quality and cryopreservation studies. The following parameters were evaluated: volume of extractable sperm, sperm motility, sperm concentration, freezing media, freezing methods, and post-thaw sperm quality. Although the existing protocols yield relatively high post-thaw motility and fertilization rates, the use of cryopreserved sperm in routine hatchery production is still limited in Brazil. PMID:19189240

  11. Cytotaxonomy of unionid freshwater mussels (Unionoida, Unionidae) from northeastern Thailand with description of a new species

    PubMed Central

    Kongim, Bangon; Sutcharit, Chirasak; Panha, Somsak

    2015-01-01

    Abstract Morphological and chromosomal characteristics of a number of unionid freshwater mussels were studied from northeastern Thailand. Karyotypes of eight species from seven genera (Chamberlainia, Ensidens, Hyriopsis, Physunio, Pseudodon, Scabies and Trapezoideus) were examined. Six species possess 2n = 38 karyotypes, whereas Scabies crispata and an unidentified Scabies sp. lack three small chromosome pairs, giving a diploid number of 32. Moreover, the karyotypes of the unidentified Scabies differ from Scabies crispata as it exhibits a telocentric chromosome pair (6m + 7sm + 2st + 1t). Most of the conchological characters also differ between the two species – adult size, colour pattern, muscle scars, pseudocardinal and lateral teeth. The name Scabies songkramensis sp. n. is proposed for the unidentified species, and its description is included in this paper. Interestingly, seven species contain mostly bi-armed chromosomes, but only the mud-dweller in stagnant water, Ensidens ingallsianus, contains predominantly five telocentric pairs. In addition, the marker chromosome characteristics of an unbalanced long arm, twisted centromere, a wider angle 180° arrangement, a twisted arm and telomeric end union reported in this study are described for the first time for unionid mussels. PMID:26261434

  12. Cytotaxonomy of unionid freshwater mussels (Unionoida, Unionidae) from northeastern Thailand with description of a new species.

    PubMed

    Kongim, Bangon; Sutcharit, Chirasak; Panha, Somsak

    2015-01-01

    Morphological and chromosomal characteristics of a number of unionid freshwater mussels were studied from northeastern Thailand. Karyotypes of eight species from seven genera (Chamberlainia, Ensidens, Hyriopsis, Physunio, Pseudodon, Scabies and Trapezoideus) were examined. Six species possess 2n = 38 karyotypes, whereas Scabiescrispata and an unidentified Scabies sp. lack three small chromosome pairs, giving a diploid number of 32. Moreover, the karyotypes of the unidentified Scabies differ from Scabiescrispata as it exhibits a telocentric chromosome pair (6m + 7sm + 2st + 1t). Most of the conchological characters also differ between the two species - adult size, colour pattern, muscle scars, pseudocardinal and lateral teeth. The name Scabiessongkramensis sp. n. is proposed for the unidentified species, and its description is included in this paper. Interestingly, seven species contain mostly bi-armed chromosomes, but only the mud-dweller in stagnant water, Ensidensingallsianus, contains predominantly five telocentric pairs. In addition, the marker chromosome characteristics of an unbalanced long arm, twisted centromere, a wider angle 180° arrangement, a twisted arm and telomeric end union reported in this study are described for the first time for unionid mussels. PMID:26261434

  13. Diversity and Distribution of Freshwater Amphipod Species in Switzerland (Crustacea: Amphipoda)

    PubMed Central

    Altermatt, Florian; Alther, Roman; Fišer, Cene; Jokela, Jukka; Konec, Marjeta; Küry, Daniel; Mächler, Elvira; Stucki, Pascal; Westram, Anja Marie

    2014-01-01

    Amphipods are key organisms in many freshwater systems and contribute substantially to the diversity and functioning of macroinvertebrate communities. Furthermore, they are commonly used as bioindicators and for ecotoxicological tests. For many areas, however, diversity and distribution of amphipods is inadequately known, which limits their use in ecological and ecotoxicological studies and handicaps conservation initiatives. We studied the diversity and distribution of amphipods in Switzerland (Central Europe), covering four major drainage basins, an altitudinal gradient of>2,500 m, and various habitats (rivers, streams, lakes and groundwater). We provide the first provisional checklist and detailed information on the distribution and diversity of all amphipod species from Switzerland. In total, we found 29 amphipod species. This includes 16 native and 13 non-native species, one of the latter (Orchestia cavimana) reported here for the first time for Switzerland. The diversity is compared to neighboring countries. We specifically discuss species of the genus Niphargus, which are often receiving less attention. We also found evidence of an even higher level of hidden diversity, and the potential occurrence of further cryptic species. This diversity reflects the biogeographic past of Switzerland, and suggests that amphipods are ideally suited to address questions on endemism and adaptive radiations, post-glaciation re-colonization and invasion dynamics as well as biodiversity-ecosystem functioning relationships in aquatic systems. PMID:25354099

  14. Parathelphusa pardus, a new species of lowland freshwater crab from swamps in central Sumatra, Indonesia (Crustacea: Brachyura: Gecarcinucidae).

    PubMed

    Ng, Peter K L; Riady, Rikhi; Windarti, Windarti

    2016-01-01

    A new species of gecarcinucid freshwater crab of the genus Parathelphusa H. Milne Edwards, 1853, is described from freshwater swamp habitats in Pekanbaru, Riau Province, in central-eastern Sumatra, Indonesia. Parathelphusa pardus sp. nov., has a very distinctive colour pattern, and in this respect, resembles P. maindroni (Rathbun, 1902) from Sumatra and Peninsular Malaysia; P. batamensis Ng, 1992, from Batam Island, Indonesia; P. reticulata Ng, 1990, from Singapore; and P. oxygona Nobili, 1901, from western Sarawak. It can be distinguished from these species and congeners by a suite of carapace, ambulatory leg, thoracic sternal and most importantly, male first gonopod characters. PMID:27394277

  15. Freshwater diatoms as environmental indicators: evaluating the effects of eutrophication using species morphology and biological indices.

    PubMed

    Vilmi, Annika; Karjalainen, Satu Maaria; Landeiro, Victor L; Heino, Jani

    2015-05-01

    Anthropogenic eutrophication is a major form of perturbation in freshwaters, and several approaches aim to recognise its effects on lake ecosystems. We compared the responses of diatom species morphology, diversity indices and diatom indices to total phosphorus, total nitrogen and distance from a point stressor causing eutrophication in a large lake. We specifically examined the degree to which extent nutrients and distance to the stressor affect variation in the values of various biological indices and diatom valve size. In addition, special attention was given to the adequate repetition of diatom valve width measurements in the context of environmental assessment. Our results showed that diatom valve width was a better indicator of nutrient concentrations than any of the diatom and diversity indices examined. However, the results varied between the two study transects, suggesting that the diatom-based variables not only respond to nutrients but also to other environmental factors (e.g. shoreline morphology). We also found that when using the method based on diatom morphology, one should measure more valves than has been originally suggested to provide a more reliable picture of response to eutrophication. We argue that diatom morphology could be considered as an additional environmental assessment tool, because it may complement the information provided by the traditional diatom indices. Diatom valve width may also be more sensitive to early phases of the eutrophication process and its effects on freshwater ecosystems than various diatom indices that were developed in regional contexts with wide ranges in nutrient levels. PMID:25864081

  16. Toxic Cyanobacterial Bloom Triggers in Missisquoi Bay, Lake Champlain, as Determined by Next-Generation Sequencing and Quantitative PCR

    PubMed Central

    Fortin, Nathalie; Munoz-Ramos, Valentina; Bird, David; Lévesque, Benoît; Whyte, Lyle G.; Greer, Charles W.

    2015-01-01

    Missisquoi Bay (MB) is a temperate eutrophic freshwater lake that frequently experiences toxic Microcystis-dominated cyanobacterial blooms. Non-point sources are responsible for the high concentrations of phosphorus and nitrogen in the bay. This study combined data from environmental parameters, E. coli counts, high-throughput sequencing of 16S rRNA gene amplicons, quantitative PCR (16S rRNA and mcyD genes) and toxin analyses to identify the main bloom-promoting factors. In 2009, nutrient concentrations correlated with E. coli counts, abundance of total cyanobacterial cells, Microcystis 16S rRNA and mcyD genes and intracellular microcystin. Total and dissolved phosphorus also correlated significantly with rainfall. The major cyanobacterial taxa were members of the orders Chroococcales and Nostocales. The genus Microcystis was the main mcyD-carrier and main microcystin producer. Our results suggested that increasing nutrient concentrations and total nitrogen:total phosphorus (TN:TP) ratios approaching 11:1, coupled with an increase in temperature, promoted Microcystis-dominated toxic blooms. Although the importance of nutrient ratios and absolute concentrations on cyanobacterial and Microcystis dynamics have been documented in other laboratories, an optimum TN:TP ratio for Microcystis dominance has not been previously observed in situ. This observation provides further support that nutrient ratios are an important determinant of species composition in natural phytoplankton assemblages. PMID:25984732

  17. Three new species of freshwater Macrostomum (Platyhelminthes, Macrostomida) from southern China.

    PubMed

    Sun, Ting; Zhang, Lv; Wang, An-Tai; Zhang, Yu

    2015-01-01

    Macrostomum is a diverse genus of turbellarians with more than 180 species described from around the world. However, the Macrostomum fauna in China is poorly known. In this study, three new species of freshwater Macrostomum were described from southern China based on morphology of the penis stylet, an important character for species identification in this genus. In M. heyuanensis n. sp., the penis stylet bends 108° leftwards at its 1/2 length then backwards besides the distal opening, and the terminal region is thicker than other parts of penis stylet. In M. dongyuanensis n. sp., the penis stylet is J-shaped, with the opening at the tail end. In M. bicaudatum n. sp., the penis stylet is C-shaped, with the upper margin of the distal end longer but slimmer than the lower margin. In addition, molecular phylogenetic analyses were conducted to aid the classification of the novel species. Finally, their habitat and taxonomic status are compared and discussed. PMID:26623848

  18. Cyanobacterial KnowledgeBase (CKB), a Compendium of Cyanobacterial Genomes and Proteomes

    PubMed Central

    Mohandass, Shylajanaciyar; Varadharaj, Sangeetha; Thilagar, Sivasudha; Abdul Kareem, Kaleel Ahamed; Dharmar, Prabaharan; Gopalakrishnan, Subramanian; Lakshmanan, Uma

    2015-01-01

    Cyanobacterial KnowledgeBase (CKB) is a free access database that contains the genomic and proteomic information of 74 fully sequenced cyanobacterial genomes belonging to seven orders. The database also contains tools for sequence analysis. The Species report and the gene report provide details about each species and gene (including sequence features and gene ontology annotations) respectively. The database also includes cyanoBLAST, an advanced tool that facilitates comparative analysis, among cyanobacterial genomes and genomes of E. coli (prokaryote) and Arabidopsis (eukaryote). The database is developed and maintained by the Sub-Distributed Informatics Centre (sponsored by the Department of Biotechnology, Govt. of India) of the National Facility for Marine Cyanobacteria, a facility dedicated to marine cyanobacterial research. CKB is freely available at http://nfmc.res.in/ckb/index.html. PMID:26305368

  19. Structure and Effects of Cyanobacterial Lipopolysaccharides

    PubMed Central

    Durai, Prasannavenkatesh; Batool, Maria; Choi, Sangdun

    2015-01-01

    Lipopolysaccharide (LPS) is a component of the outer membrane of mainly Gram-negative bacteria and cyanobacteria. The LPS molecules from marine and terrestrial bacteria show structural variations, even among strains within the same species living in the same environment. Cyanobacterial LPS has a unique structure, since it lacks heptose and 3-deoxy-d-manno-octulosonic acid (also known as keto-deoxyoctulosonate (KDO)), which are present in the core region of common Gram-negative LPS. In addition, the cyanobacterial lipid A region lacks phosphates and contains odd-chain hydroxylated fatty acids. While the role of Gram-negative lipid A in the regulation of the innate immune response through Toll-like Receptor (TLR) 4 signaling is well characterized, the role of the structurally different cyanobacterial lipid A in TLR4 signaling is not well understood. The uncontrolled inflammatory response of TLR4 leads to autoimmune diseases such as sepsis, and thus the less virulent marine cyanobacterial LPS molecules can be effective to inhibit TLR4 signaling. This review highlights the structural comparison of LPS molecules from marine cyanobacteria and Gram-negative bacteria. We discuss the potential use of marine cyanobacterial LPS as a TLR4 antagonist, and the effects of cyanobacterial LPS on humans and marine organisms. PMID:26198237

  20. Warm season chloride concentrations in stream habitats of freshwater mussel species at risk.

    PubMed

    Todd, Aaron K; Kaltenecker, M Georgina

    2012-12-01

    Warm season (May-October) chloride concentrations were assessed in stream habitats of freshwater mussel species at risk in southern Ontario, Canada. Significant increases in concentrations were observed at 96% of 24 long-term (1975-2009) monitoring sites. Concentrations were described as a function of road density indicating an anthropogenic source of chloride. Linear regression showed that 36% of the variation of concentrations was explained by road salt use by the provincial transportation ministry. Results suggest that long-term road salt use and retention is contributing to a gradual increase in baseline chloride concentrations in at risk mussel habitats. Exposure of sensitive mussel larvae (glochidia) to increasing chloride concentrations may affect recruitment to at risk mussel populations. PMID:22940273

  1. Freshwater ascomycetes: Alascospora evergladensis, a new genus and species from the Florida Everglades.

    PubMed

    Raja, Huzefa A; Violi, Helen A; Shearer, Carol A

    2010-01-01

    Alascospora evergladensis, a freshwater ascomycete collected from submerged dead petioles of Nymphaea odorata during a survey of aquatic fungi along a phosphorus gradient in the Florida Everglades, is described and illustrated as a new genus and species in the Pleosporales (Pleosporomycetidae, Dothideomycetes). The new fungus is unique among genera in the Pleosporales based on a combination of morphological characters that include light brown, translucent, membranous, ostiolate ascomata with dark, amorphous material irregularly deposited on the peridium, especially around the ostiole; globose, fissitunicate, thick-walled asci; septate pseudoparaphyses; and 1-septate ascospores that are hyaline when young, and surrounded by a hyaline gelatinous sheath that is wing-shaped in outline on each side of the ascospore. The sheath is distinctive in that it first expands in water and is translucent, then condenses and darkens around older ascospores, giving them a dark brown, verruculose appearance. PMID:20120226

  2. Acute toxicity of six freshwater mussel species (Glochidia) to six chemicals: Implications for daphnids and Utterbackia imbecillis as surrogates for protection of freshwater mussels (Unionidae)

    USGS Publications Warehouse

    Milam, C.D.; Farris, J.L.; Dwyer, F.J.; Hardesty, D.K.

    2005-01-01

    Acute (24-h) toxicity tests were used in this study to compare lethality responses in early life stages (glochidia) of six freshwater mussel species, Leptodea fragilis, U. imbecillis, Lampsilis cardium, Lampsilis siliquoidea, Megalonaias nervosa, and Ligumia subrostrata, and two standard test organisms, Ceriodaphnia dubia and Daphnia magna. Concentrations of carbaryl, copper, 4-nonylphenol, pentachlorophenol, permethrin, and 2,4-D were used in acute exposures to represent different chemical classes and modes of action. The relative sensitivities of species were evaluated by ranking their LC 50 values for each chemical. We used these ranks to determine the extent to which U. imbecillis (one of the most commonly used unionids in toxicity tests) was representative of the tolerances of other mussels. We also calculated geometric mean LC50s for the families Unionidae and Daphnidae. Rankings of these data were used to assess the extent to which Daphnidae can be used as surrogates for freshwater mussels relative to chemical sensitivity. While no single chemical elicited consistently high or low toxicity estimates, carbaryl and 2,4-D were generally the least toxic to all species tested. No species was always the most sensitive, and Daphnidae were generally protective of Unionidae. Utterbackia imbecillis, while often proposed as a standard unionid mussel test species, did not always qualify as a sufficient surrogate (i.e., a substitute organism that often elicits similar sensitivity responses to the same contaminant exposure) for other species of mussels, since it was usually one of the more tolerant species in our rankings. U. imbecillis should be used as a surrogate species only with this caution on its relative insensitivity. ?? 2005 Springer Science+Business Media, Inc.

  3. Cross-Cordillera exchange mediated by the Panama Canal increased the species richness of local freshwater fish assemblages.

    PubMed

    Smith, Scott A; Bell, Graham; Bermingham, Eldredge

    2004-09-22

    Completion of the Panama Canal in 1914 breached the continental divide and set into motion a natural experiment of unprecedented magnitude by bringing previously isolated freshwater fish communities into contact. The construction of a freshwater corridor connecting evolutionarily isolated communities in Pacific and Caribbean watersheds dramatically increased the rate of dispersal, without directly affecting species interactions. Here, we report that a large fraction of species have been able to establish themselves on the other side of the continental divide, whereas no species have become extinct, leading to a local increase in species richness. Our results suggest that communities are not saturated and that competitive exclusion does not occur over the time-scale previously envisioned. Moreover, the results of this unintentional experiment demonstrate that community composition and species richness were regulated by the regional process of dispersal, rather than by local processes such as competition and predation. PMID:15347510

  4. Assessing species boundaries using multilocus species delimitation in a morphologically conserved group of neotropical freshwater fishes, the Poecilia sphenops species complex (Poeciliidae).

    PubMed

    Bagley, Justin C; Alda, Fernando; Breitman, M Florencia; Bermingham, Eldredge; van den Berghe, Eric P; Johnson, Jerald B

    2015-01-01

    Accurately delimiting species is fundamentally important for understanding species diversity and distributions and devising effective strategies to conserve biodiversity. However, species delimitation is problematic in many taxa, including 'non-adaptive radiations' containing morphologically cryptic lineages. Fortunately, coalescent-based species delimitation methods hold promise for objectively estimating species limits in such radiations, using multilocus genetic data. Using coalescent-based approaches, we delimit species and infer evolutionary relationships in a morphologically conserved group of Central American freshwater fishes, the Poecilia sphenops species complex. Phylogenetic analyses of multiple genetic markers (sequences of two mitochondrial DNA genes and five nuclear loci) from 10/15 species and genetic lineages recognized in the group support the P. sphenops species complex as monophyletic with respect to outgroups, with eight mitochondrial 'major-lineages' diverged by ≥2% pairwise genetic distances. From general mixed Yule-coalescent models, we discovered (conservatively) 10 species within our concatenated mitochondrial DNA dataset, 9 of which were strongly supported by subsequent multilocus Bayesian species delimitation and species tree analyses. Results suggested species-level diversity is underestimated or overestimated by at least ~15% in different lineages in the complex. Nonparametric statistics and coalescent simulations indicate genealogical discordance among our gene tree results has mainly derived from interspecific hybridization in the nuclear genome. However, mitochondrial DNA show little evidence for introgression, and our species delimitation results appear robust to effects of this process. Overall, our findings support the utility of combining multiple lines of genetic evidence and broad phylogeographical sampling to discover and validate species using coalescent-based methods. Our study also highlights the importance of testing for

  5. Assessing Species Boundaries Using Multilocus Species Delimitation in a Morphologically Conserved Group of Neotropical Freshwater Fishes, the Poecilia sphenops Species Complex (Poeciliidae)

    PubMed Central

    Bagley, Justin C.; Alda, Fernando; Breitman, M. Florencia; Bermingham, Eldredge; van den Berghe, Eric P.; Johnson, Jerald B.

    2015-01-01

    Accurately delimiting species is fundamentally important for understanding species diversity and distributions and devising effective strategies to conserve biodiversity. However, species delimitation is problematic in many taxa, including ‘non-adaptive radiations’ containing morphologically cryptic lineages. Fortunately, coalescent-based species delimitation methods hold promise for objectively estimating species limits in such radiations, using multilocus genetic data. Using coalescent-based approaches, we delimit species and infer evolutionary relationships in a morphologically conserved group of Central American freshwater fishes, the Poecilia sphenops species complex. Phylogenetic analyses of multiple genetic markers (sequences of two mitochondrial DNA genes and five nuclear loci) from 10/15 species and genetic lineages recognized in the group support the P. sphenops species complex as monophyletic with respect to outgroups, with eight mitochondrial ‘major-lineages’ diverged by ≥2% pairwise genetic distances. From general mixed Yule-coalescent models, we discovered (conservatively) 10 species within our concatenated mitochondrial DNA dataset, 9 of which were strongly supported by subsequent multilocus Bayesian species delimitation and species tree analyses. Results suggested species-level diversity is underestimated or overestimated by at least ~15% in different lineages in the complex. Nonparametric statistics and coalescent simulations indicate genealogical discordance among our gene tree results has mainly derived from interspecific hybridization in the nuclear genome. However, mitochondrial DNA show little evidence for introgression, and our species delimitation results appear robust to effects of this process. Overall, our findings support the utility of combining multiple lines of genetic evidence and broad phylogeographical sampling to discover and validate species using coalescent-based methods. Our study also highlights the importance of

  6. Molecular Evidence for High Frequency of Multiple Paternity in a Freshwater Shrimp Species Caridina ensifera

    PubMed Central

    Yue, Gen Hua; Chang, Alex

    2010-01-01

    Background Molecular genetic analyses of parentage provide insights into mating systems. Although there are 22,000 members in Malacostraca, not much has been known about mating systems in Malacostraca. The freshwater shrimp Caridina ensifera blue, is a new species belonging to Malacostraca which was discovered recently in Sulawesi, Indonesia. Due to its small body size and low fecundity, this species is an ideal species to study the occurrence and frequency of multiple paternity and to understand of how the low fecundity species persist and evolve. Methodology/Principal Findings In this study, we developed four polymorphic microsatellites from C. ensifera and applied them to investigate the occurrence and frequency of multiple paternity in 20 C. ensifera broods caught from Lake Matano, Sulawesi. By genotyping the mother and all offspring from each brood we discovered multiple paternity in all 20 broods. In most of the 20 broods, fathers contributed skewed numbers of offspring and there was an apparent inverse correlation between reproductive success of sires and their relatedness to mothers. Conclusions/Significance Our results in combination with recent reports on multiple paternity in crayfish, crab and lobster species suggests that multiple paternity is common in Malacostraca. Skewed contribution of fathers to the numbers of offspring and inverse correlation between reproductive success of sires and their relatedness to mothers suggest that sperm competition occurred and/or pre- and postcopulatory female choice happen, which may be important for avoiding the occurrence of inbreeding and optimize genetic variation in offspring and for persistence and evolution of low fecundity species. PMID:20856862

  7. Comparative salinity tolerance of three indigenous tropical freshwater cladoceran species; Moinodaphnia macleayi, Ceriodaphnia rigaudii and Diaphanosoma brachyurum.

    PubMed

    Mohammed, Azad; Agard, John B R

    2007-04-01

    The acute salinity tolerance of three tropical freshwater cladoceran species, M. macleayi, C. rigaudii and D. brachyurum was determined. The existence of these species represented new records for Trinidad and Tobago, a tropical Caribbean island. It has a large oil based industry, in which, the primary effluent (saline produced water) is discharged directly into many freshwater systems. Cladoceran species are used routinely in temperate regions, to assess the impacts of chemicals and effluents in freshwater systems. However, relatively few studies have assessed the salinity tolerance of these organisms. Test organisms were assayed using seven salinity treatments (0, 1, 3, 5, 10, 15, 20, 25 per thousand) prepared by volumetrically mixing natural filtered seawater with dilution water. C. rigaudii had a 48 h LC50 of 1.6 per thousand, M. macleayi 1.5 per thousand and D. brachyurum <1 per thousand. The CSmax (critical salinity maximum) for C. rigaudii and M. macleayi was 3 per thousand after 48 h, compared to 1 per thousand for D. brachyurum. There was no salinity value at which there was 100% survival. The resulting salinity response curve was a straight line which indicated that each species was intolerant of salt. Consequently, any of these can be considered as a representative freshwater organism for toxicity testing in Trinidad and Tobago. PMID:16897500

  8. Risk to human health associated with the environmental occurrence of cyanobacterial neurotoxic alkaloids anatoxins and saxitoxins.

    PubMed

    Testai, Emanuela; Scardala, Simona; Vichi, Susanna; Buratti, Franca M; Funari, Enzo

    2016-05-01

    Cyanobacteria are ubiquitous photosynthetic micro-organisms forming blooms and scums in surface water; among them some species can produce cyanotoxins giving rise to some concern for human health and animal life. To date, more than 65 cyanobacterial neurotoxins have been described, of which the most studied are the groups of anatoxins and saxitoxins (STXs), comprising many different variants. In freshwaters, the hepatotoxic microcystins represent the most frequently detected cyanotoxin: on this basis, it could appear that neurotoxins are less relevant, but the low frequency of detection may partially reflect an a priori choice of target analytes, the low method sensitivity and the lack of certified standards. Cyanobacterial neurotoxins target cholinergic synapses or voltage-gated ion channels, blocking skeletal and respiratory muscles, thus leading to death by respiratory failure. This review reports and analyzes the available literature data on environmental occurrence of cyanobacterial neurotoxic alkaloids, namely anatoxins and STXs, their biosynthesis, toxicology and epidemiology, derivation of guidance values and action limits. These data are used as the basis to assess the risk posed to human health, identify critical exposure scenarios and highlight the major data gaps and research needs. PMID:26923223

  9. Toxin production in cyanobacterial mats from ponds on the McMurdo ice shelf, Antarctica.

    PubMed

    Hitzfeld, B C; Lampert, C S; Spaeth, N; Mountfort, D; Kaspar, H; Dietrich, D R

    2000-12-01

    Cyanobacteria are known to produce hepatotoxic substances, the functional and ecological role of these toxins, however, remains largely unclear. Toxic properties of cyanobacteria collected in Antarctica were investigated to determine whether toxin-producing species can also be found under these environmental conditions. Samples were collected from meltwater ponds on the McMurdo Ice Shelf, Antarctica in the summers of 1997 to 1999. These ponds are colonized by benthic algae and cyanobacterial mats. Oscillatoriales, Nodularia sp., and Nostoc sp. constituted the major taxa in freshwater ponds, while Nostoc sp. was missing from brackish and saline ponds. Samples were taken from either floating, submerged or benthic mats, and extracted for in vitro toxicity testing. The presence of toxins was determined by the phosphatase-inhibition assay and by high performance liquid chromatography. The cytotoxic properties of the extracts were investigated in hepatocytes determining 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide metabolism and trypan blue dye exclusion. The results show that all cyanobacterial extracts display phosphatase-inhibiting activity, of which approximately half had significantly greater than 50% inhibiting activity. The presence of nodularin and microcystin-LR was established by high performance liquid chromatography. Cytotoxic properties, independent of the phosphatase inhibiting activity, were also detected. Toxic strains of cyanobacteria can therefore also be found in Antarctica and this finding may lead to further insight into potential ecological roles of cyanobacterial phosphatase inhibiting toxins. PMID:10858513

  10. Habitat characteristics for different freshwater snail species as determined biologically through macroinvertebrate information.

    PubMed

    El-Khayat, Hanaa M M; Mahmoud, Kadria M A; Mostafa, Bayomy B; Tantawy, Ahmad A; El-Deeb, Fatma A; Ragb, Fawzy M; Ismail, Nahed M; El-Said, Kalil M; Taleb, Hoda M Abu

    2011-12-01

    Macro-invertebrates including freshwater snails collected from 643 sites over 8 successive seasons among the River Nile, branches, main canals and certain drains in eight Egyptian Governorates. Thirteen snail species and one bivalve species were identified. The most distributed were Lanistus carinatus and Physa acuta while the most abundant were Cleopatra bulimoides and Physa acuta during the whole study. The sites that harbored each snail species in all the examined water-courses were grouped seasonally and their biological assessment was determined by their minimum and maximum total point similarity percentage to that of the corresponded reference site and mean of the total points. Habitats for most snail species attained minimum total point's similarity percentage less than 21% (very poor habitat) during autumn and winter then spring while during summer very poor habitat was harbored by only few snail species. P. acuta was the only survived snails in habitat which attained 0 as a minimum total point's similarity percentage during two seasons and L. carinatus and Succinea cleopatra during one season. With respect to medically important snails very poor sites constituted 23% of Biomphalaria alexandrina sites, 14% of Lymnaea natalensis and 9.4% of Bulinus truncatus sites. The studied macroinvertebrate matrices, total number of organisms, taxa richness, the Ephemeroptera, Plecoptera, and Trichoptera (EPT) index, ratio of EPT index to chironomidae, ratio of scraper to filtering collector, contribution of dominant macroinvertebrate major group, comparison revealed descending tolerances from B. alexanrina followed by L. natalensis then B. truncates, but Hilsenhoff Biotic Index (HBI) showed the same tolerance to organic pollution. PMID:22435158

  11. Biochemical composition of three algal species proposed as food for captive freshwater mussels

    USGS Publications Warehouse

    Gatenby, C.M.; Orcutt, D.M.; Kreeger, D.A.; Parker, B.C.; Jones, V.A.; Neves, R.J.

    2003-01-01

    To identify potential diets for rearing captive freshwater mussels, the protein, carbohydrate (CHO), and lipid contents of two green algae, Neochloris oleoabundans, Bracteacoccus grandis, and one diatom, Phaeodactylum tricornutum, were compared at different growth stages. The fatty acid and sterol composition were also identified. Protein was greatest (55-70%) for all species at late log growth stage (LL), and declined in late stationary (LS) growth. CHO was greatest at LS stage for all species (33.9-56.4% dry wt). No significant change in lipid levels occurred with growth stage, but tended to increase in N. oleoabundans. Mean lipid content differed significantly in the order: N. oleoabundans > P. tricornutum > B. grandis. Total fatty acids (TFA) were higher at LS stage compared to other stages in the two green algae, and stationary stage in the diatom. Mean unsaturated fatty acids (UFA) as %TFA was significantly higher in N. oleoabundans than the other species. The green algae contained high percentages of C-18 polyunsaturated fatty acids (PUFAs), while the diatom was abundant in C-16 saturated and mono-unsaturated fatty acids and C-20 PUFA fatty acids. Growth stage had no effect on sterol concentration of any species. B. grandis showed significantly higher sterol levels than the other species except P. tricornutum at S stage. B. grandis was characterized by predominantly ??5, C-29 sterols, while N. oleoabundans synthesized ??5,7, ??5,7,22, and ??7, C-28 sterols. P. tricornutum produced primarily a ??5,22, C-28 sterol, and a small amount of a ??7,22, C-28 sterol.

  12. The Geographic Distribution of Liver Cancer in Canada Does Not Associate with Cyanobacterial Toxin Exposure

    PubMed Central

    Labine, Meaghan A.; Green, Chris; Mak, Giselle; Xue, Lin; Nowatzki, Janet; Griffith, Jane; Minuk, Gerald Y.

    2015-01-01

    Background: The incidence of liver cancer has been increasing in Canada over the past decade, as has cyanobacterial contamination of Canadian freshwater lakes and drinking water sources. Cyanotoxins released by cyanobacteria have been implicated in the pathogenesis of liver cancer. Objective: To determine whether a geographic association exists between liver cancer and surrogate markers of cyanobacterial contamination of freshwater lakes in Canada. Methods: A negative binomial regression model was employed based on previously identified risk factors for liver cancer. Results: No association existed between the geographic distribution of liver cancer and surrogate markers of cyanobacterial contamination. As predicted, significant associations existed in areas with a high prevalence of hepatitis B virus infection, large immigrant populations and urban residences. Discussion and Conclusions: The results of this study suggest that cyanobacterial contamination of freshwater lakes does not play an important role in the increasing incidence of liver cancer in Canada. PMID:26633441

  13. Allelopathic potential and ecotoxicity evaluation of gallic and nonanoic acids to prevent cyanobacterial growth in lentic systems: A preliminary mesocosm study.

    PubMed

    Techer, Didier; Fontaine, Pascal; Personne, Aline; Viot, Sandrine; Thomas, Marielle

    2016-03-15

    The increase in anthropogenic nutrient loading affecting many freshwater ecosystems combined with global warming may lead to cyanobacterial blooms on an increasingly frequent basis. Among the various physicochemical and biological methods which have been proposed to rapidly control blue-green algae growth, the use of plant-derived substances such as allelochemicals has gained great interest as an environment-friendly approach. The primary aim of this work was to evaluate the efficiency of gallic and nonanoic acid application to preemptively inhibit cyanobacterial growth in lentic hydrosystems. In order to address the process feasibility under realistic exposure scenarios, thirteen outdoor freshwater mesocosms (unit volume: 3m(3)) were designed, each containing phytoplankton (including local blue-green algae species) and various non-target organisms from higher trophic levels (Physa, Lymnaea, Gammarus, and Scardinius erythrophthalmus). After an 8-week mesocosm stabilization period, a full factorial design based on the presence/absence of gallic acid (GA) and nonanoic acid (NA) (including a control group) was implemented into the exposure tanks. Regular monitoring of major phytoplankton taxa was conducted during a 28-day experiment using an on-line fluorometer. The main results suggested that gallic acid was more efficient than nonanoic acid at limiting cyanobacterial growth at concentrations as low as 1 mg L(-1). Successive gallic acid applications (at 1, 2 and 4 mg L(-1)) at the early stages of cyanobacterial growth did not allow the complete elimination of blue-green algae from the mesocosms. However, the specificity of the allelopathic effect of gallic acid towards cyanobacteria was compatible with the maintenance of a primary productivity in the treated tanks as indicated by the photoautotrophic growth of other algal taxa. Finally, no biomarker induction signal could be reported in non-target species. Further gallic acid application trials in lentic systems such

  14. Evaluation of a Method for Quantifying Eugenol Concentrations in the Fillet Tissue from Freshwater Fish Species.

    PubMed

    Meinertz, Jeffery R; Schreier, Theresa M; Porcher, Scott T; Smerud, Justin R

    2016-03-01

    AQUI-S 20E(®) (active ingredient, eugenol; AQUI-S New Zealand Ltd, Lower Hutt, New Zealand) is being pursued for approval as an immediate-release sedative in the United States. A validated method to quantify the primary residue (the marker residue) in fillet tissue from AQUI-S 20E-exposed fish was needed. A method was evaluated for determining concentrations of the AQUI-S 20E marker residue, eugenol, in freshwater fish fillet tissue. Method accuracies from fillet tissue fortified at nominal concentrations of 0.15, 1, and 60 μg/g from six fish species ranged from 88-102%. Within-day and between-day method precisions (% CV) from the fortified tissue were ≤8.4% CV. There were no coextracted compounds from the control fillet tissue of seven fish species that interfered with eugenol analyses. Six compounds used as aquaculture drugs did not interfere with eugenol analyses. The lower limit of quantitation (LLOQ) was 0.012 μg/g. The method was robust, i.e., in most cases, minor changes to the method did not impact method performance. Eugenol was stable in acetonitrile-water (3 + 7, v/v) for at least 14 days, in fillet tissue extracts for 4 days, and in fillet tissue stored at ~ -80°C for at least 84 days. PMID:27010409

  15. An eDNA Assay to Monitor a Globally Invasive Fish Species from Flowing Freshwater.

    PubMed

    Adrian-Kalchhauser, Irene; Burkhardt-Holm, Patricia

    2016-01-01

    Ponto-Caspian gobies are a flock of five invasive fish species that have colonized freshwaters and brackish waters in Europe and North America. One of them, the round goby Neogobius melanostomus, figures among the 100 worst invaders in Europe. Current methods to detect the presence of Ponto-Caspian gobies involve catching or sighting the fish. These approaches are labor intense and not very sensitive. Consequently, populations are usually detected only when they have reached high densities and when management or containment efforts are futile. To improve monitoring, we developed an assay based on the detection of DNA traces (environmental DNA, or eDNA) of Ponto-Caspian gobies in river water. The assay specifically detects invasive goby DNA and does not react to any native fish species. We apply the assay to environmental samples and demonstrate that parameters such as sampling depth, sampling location, extraction protocol, PCR protocol and PCR inhibition greatly impact detection. We further successfully outline the invasion front of Ponto-Caspian gobies in a large river, the High Rhine in Switzerland, and thus demonstrate the applicability of the assay to lotic environments. The eDNA assay requires less time, equipment, manpower, skills, and financial resources than the conventional monitoring methods such as electrofishing, angling or diving. Samples can be taken by untrained individuals, and the assay can be performed by any molecular biologist on a conventional PCR machine. Therefore, this assay enables environment managers to map invaded areas independently of fishermen's' reports and fish community monitorings. PMID:26814998

  16. Evaluation of a method for quantifying eugenol concentrations in the fillet tissue from freshwater fish species

    USGS Publications Warehouse

    Meinertz, Jeffery R.; Schreier, Theresa M.; Porcher, Scott T.; Smerud, Justin R.

    2016-01-01

    AQUI-S 20E® (active ingredient, eugenol; AQUI-S New Zealand Ltd, Lower Hutt, New Zealand) is being pursued for approval as an immediate-release sedative in the United States. A validated method to quantify the primary residue (the marker residue) in fillet tissue from AQUI-S 20E–exposed fish was needed. A method was evaluated for determining concentrations of the AQUI-S 20E marker residue, eugenol, in freshwater fish fillet tissue. Method accuracies from fillet tissue fortified at nominal concentrations of 0.15, 1, and 60 μg/g from six fish species ranged from 88–102%. Within-day and between-day method precisions (% CV) from the fortified tissue were ≤8.4% CV. There were no coextracted compounds from the control fillet tissue of seven fish species that interfered with eugenol analyses. Six compounds used as aquaculture drugs did not interfere with eugenol analyses. The lower limit of quantitation (LLOQ) was 0.012 μg/g. The method was robust, i.e., in most cases, minor changes to the method did not impact method performance. Eugenol was stable in acetonitrile–water (3 + 7, v/v) for at least 14 days, in fillet tissue extracts for 4 days, and in fillet tissue stored at ~ −80°C for at least 84 days.

  17. Bioaccumulative characteristics of hexabromocyclododecanes in freshwater species from an electronic waste recycling area in China.

    PubMed

    Zhang, Xiaoling; Yang, Fangxing; Luo, Caihong; Wen, Sheng; Zhang, Xian; Xu, Ying

    2009-09-01

    Hexabromocyclododecanes (HBCDs) are now emerging ubiquitous contaminants due to their wide usage, persistence and toxicities. To investigate the bioaccumulative characteristics of HBCDs, sediments, Winkle (Littorina littorea), crucian carp (Carassius carassius) and loach (Misgurnus anguillicaudatus) were collected from two streams near an E-waste dismantling site in China, and HBCD exposure test was then conducted on Chinese rare minnow. The concentration of HBCDs was 14 ng g(-1) dry weight in sediments, 186, 377 and 1791 ng g(-1) lipid weight in winkle, crucian carp and loach, respectively. gamma-HBCD was found to be the dominant diastereoisomer in the sediments (63% of total HBCDs). However, alpha-HBCD was selectively accumulated in the biotic samples and contributed to 77%, 63% and 63% of total HBCDs in winkle, crucian carp and loach, respectively. Moreover, an enrichment of (-)-enantiomers of alpha- and gamma-HBCD were found in the winkle. The reverse results were observed in the crucian carp and loach. Similar observations of diastereoisomeric and enantiomeric composition were obtained in Chinese rare minnow with those found in the crucian carp and loach. These results indicate that the freshwater species from the streams are contaminated by HBCDs. alpha-HBCD can be selectively accumulated in organisms and the accumulative characteristics are enantioselective among species. PMID:19616822

  18. Biomarker study of a municipal effluent dispersion plume in two species of freshwater mussels.

    PubMed

    Gagné, F; Blaise, C; Aoyama, I; Luo, R; Gagnon, C; Couillard, Y; Campbell, P; Salazar, M

    2002-01-01

    The toxicological effects of a primary-treated municipal effluent plume were investigated in two species of freshwater mussels, Elliptio complanata and Dreissena polymorpha, exposed for 62 days at sites upstream and downstream of an effluent outfall in the St. Lawrence River (Quebec, Canada). Levels of metallothioneins (MT), cytochrome P4501A1 activity, DNA damage, total lipids, relative levels of vitellins, and phagocytic activity (in E. complanata hemocytes) were determined after the exposure period. A parallel analysis measured heavy metals and coprostanol in mussel tissues. The results show that significant levels of coprostanol and some metals (specifically, Cu, Hg, Sb, Se, and Zn) had accumulated in mussels caged 5 km downstream of the effluent plume. Mixed-function oxidase activity, MT in gills, total lipids, DNA damage (in D. polymorpha only), and total hemolymph bacteria (in E. complanata only) had increased in these mussels, while levels of total cadmium (Cd), MT in digestive glands or whole soft tissues, phagocytic activity, and DNA damage in the digestive gland (in E. complanata only) were diminished. The exposure of mussels to surface waters contaminated by a municipal effluent led to many stress responses, depending on both the tissues and the species being examined. PMID:12112623

  19. Effects of the essential metals copper and zinc in two freshwater detritivores species: Biochemical approach.

    PubMed

    Quintaneiro, C; Ranville, J; Nogueira, A J A

    2015-08-01

    The input of metals into freshwater ecosystems from natural and anthropogenic sources impairs water quality and can lead to biological alterations in organisms and plants, compromising the structure and the function of these ecosystems. Biochemical biomarkers may provide early detection of exposure to contaminants and indicate potential effects at higher levels of biological organisation. The effects of 48h exposures to copper and zinc on Atyaephyra desmarestii and Echinogammarus meridionalis were evaluated with a battery of biomarkers of oxidative stress and the determination of ingestion rates. The results showed different responses of biomarkers between species and each metal. Copper inhibited the enzymatic defence system of both species without signs of oxidative damage. Zinc induced the defence system in E. meriodionalis with no evidence of oxidative damage. However, in A. desmarestii exposed to zinc was observed oxidative damage. In addition, only zinc had significantly reduced the ingestion rate and just for E. meridionalis. The value of the integrated biomarkers response increased with concentration of both metals, which indicates that might be a valuable tool to interpretation of data as a whole, as different parameters have different weight according to type of exposure. PMID:25899672

  20. Bioaccumulation of heavy metals by freshwater algal species of Bhavnagar, Gujarat, India.

    PubMed

    Jaiswar, Santial; Kazi, Mudassar Anisoddin; Mehta, Shailesh

    2015-11-01

    The present study investigated copper, cadmium, lead and zinc accumulation in algal species Oedogonium, Cladophora, Oscillatoria and Spirogyra from freshwater habitats of Bhavnagar, India. Eight different locations were periodically sampled during August 2009 to March 2011. The general trend of heavy metal concentrations in all the algal species in present study (except at few stations), were found to be in the following order: Zn > Cu > Pb > Cd. Highest accumulation of Cu was recorded in Oedogonium, while Cladophora showed highest accumulation of Pb signifying a good bioaccumulator. Oscillatoria and Oedogonium were highest Zn accumulating algae which showed significant difference between the means at P < 0.05. ANOVA was performed for comparing significance mean between the groups and within the group for heavy metals in water. The concentration of heavy metals in water was in the following order: Zn > Cu > Pb > Cd. The present study showed that Oedogonium, Cladophora, Oscillatoria and Spirogyra were excellent bioaccumulator and could be utilized as biomonitoring agents in water bodies receiving waste contaminated by metals. PMID:26688974

  1. Acute Toxicity and Bioaccumulation of Chloroform to Four Species of Freshwater Fish

    SciTech Connect

    ,

    1980-08-01

    Acute toxicity of chloroform to four species of freshwater fish was studied in flow-through 96-hr toxicity tests. Chloroform is toxic to fish in the tens of parts per million, a concentration well above that which would be expected to be produced under normal power plant chlorination conditions. Investigations of acute toxicity of chloroform and the bioaccumulation of chlorinated compounds in tissues of fish revealed differences in tolerance levels and tissue accumulations. Mean 96-hr LC{sub 50}s for chloroform were 18 ppm for rainbow trout and bluegill, 51 ppm for largemouth bass and 75 ppm for channel catfish. Mortalities of bluegill and largemouth bass occurred during the first 4 hr of exposure while rainbow trout and channel catfish showed initial tolerance and mortalities occurred during the latter half of the 96-hr exposure. Rainbow trout had the highest level of chloroform tissue accumulation, 7 {micro}g/g tissue, catfish the second highest, 4 {micro}g/g tissue, followed by bluegill and largemouth bass which each accumulated about 3 {micro}g/g tissue. Accumulation of chloroform was less than one order of magnitude above water concentrations for all species.

  2. Cyanobacterial NADPH dehydrogenase complexes

    SciTech Connect

    Ogawa, Teruo; Mi, Hualing

    2007-07-01

    Cyanobacteria possess functionally distinct multiple NADPH dehydrogenase (NDH-1) complexes that are essential to CO2 uptake, photosystem-1 cyclic electron transport and respiration. The unique nature of cyanobacterial NDH-1 complexes is the presence of subunits involved in CO2 uptake. Other than CO2 uptake, chloroplastic NDH-1 complex has similar role as cyanobacterial NDH-1 complexes in photosystem-1 cyclic electron transport and respiration (chlororespiration). In this mini-review we focus on the structure and function of cyanobacterial NDH-1 complexes and their phylogeny. The function of chloroplastic NDH-1 complex and characteristics of plants defective in NDH-1 are also described forcomparison.

  3. Chronic toxicity of chloride to freshwater species: effects of hardness and implications for water quality guidelines.

    PubMed

    Elphick, James R F; Bergh, Kelli D; Bailey, Howard C

    2011-01-01

    Toxicity tests using nine freshwater species (Ceriodaphnia dubia, Daphnia magna, Oncorhynchus mykiss, Pimephales promelas, Lumbriculus variegatus, Tubifex tubifex, Chironomus dilutus, Hyallela azteca, and Brachionus calyciflorus) were conducted to evaluate their sensitivity to chloride. Acute-to-chronic ratios (ACRs) from these tests indicate the ACR of 7.59 employed by the United States Environmental Protection Agency (U.S. EPA) in deriving its water quality guideline for chloride may be conservative; a revised ACR of 3.50 is presented here. The endpoints used to calculate the ACR included 24-h to 96-h median lethal concentrations (LC50s) for acute tests, and 48-h to 54-d inhibition concentration (ICx) values for growth or reproduction for chronic exposures. Data from the present chronic toxicity tests, and other investigators, were used to propose a water quality guideline for long-term exposure to chloride using a species sensitivity distribution (SSD) approach. The 5th percentile from the SSD was calculated as 307 mg/L and proposed as the water quality guideline. Cladocerans were the most sensitive species in the dataset. Ceriodaphnia dubia was used to evaluate the relationship between water hardness and sensitivity to chloride. A strong relationship was observed and was used to establish a hardness-related equation to modify the proposed water quality guideline on the basis of water hardness, resulting in values ranging from 64 mg/L chloride at 10 mg/L hardness to 388 mg/L chloride at 160 mg/L hardness (as CaCO₃). These data suggest that current water quality guidelines for chloride may be overly conservative in water with moderate-to-high hardness, and may not be sufficiently protective under soft-water conditions. PMID:20872898

  4. Comparison of Two Freshwater Turtle Species as Monitors of Environmental Contamination

    SciTech Connect

    Meyers-Schone, L.

    1990-01-01

    Two species of turtles that occupy different ecological niches were compared for their usefulness as monitors of contamination in freshwater ecosystems. Trachemvs scrinta (Agassiz) (yellow-bellied slider) and Chelvdra sernentina (Linnaeus) (common snapping turtle) were selected for comparison based on species abundance and differences in food habits and sediment contact. A review of the literature on contaminants in turtles and results of preliminary surveys conducted at the field sites, which are included in this study, were used to direct and focus this research project. White Oak Lake, a settling basin for low-level radioactive and nonradioactive contaminants, and Bearden Creek Embayment, an uncontaminated reference site upriver, were used as study sites in the investigation of turtles as indicators of chemical contamination. Turtles were analyzed for concentrations of strontium-go, cesium-137, cobalt 60, and mercury in specific target tissues, and for single-stranded DNA breaks, a non-specific indicator of possible exposure to genotoxic agents in the environment. Significantly higher concentrations of {sup 90}Sr, {sup 137}Cs, {sup 60}Co, and mercury were detected in turtles from White Oak Lake than in turtles from the reference site. In addition, turtles from White Oak Lake contained a significantly greater amount of DNA damage than those from the reference site. Although this suggests greater exposure of White Oak Lake turtles to genotoxic agents, further studies are needed to establish the cause of the enhanced amount of single-stranded breaks. Interspecific comparisons of the turtles from White Oak Lake indicated that diet may play a significant role in the exposure of turtles to certain contaminants. No difference was detected between the concentrations of {sup 90}Sr, {sup 137}Cs, {sup 60}Co between the two species.

  5. Ecological Assessment of Two Species of Potamonautid Freshwater Crabs from the Eastern Highlands of Zimbabwe, with Implications for Their Conservation.

    PubMed

    Dalu, Tatenda; Sachikonye, Mwazvita T B; Alexander, Mhairi E; Dube, Timothy; Froneman, William P; Manungo, Kwanele I; Bepe, Onias; Wasserman, Ryan J

    2016-01-01

    The spatial ecology of freshwater crabs and their conservation status is largely understudied in Africa. An ecological assessment was conducted at 104 localities in 51 rivers and/or streams in the Eastern Highlands of Zimbabwe whereby the distribution and abundances of freshwater crab species were mapped and the possible drivers of the observed trends in population structure explored. In addition, information on crab utilisation as a food resource by local communities was assessed via face to face interviews across the region. Finally, the conservation status of each species was assessed using the IUCN Red List criteria. Only two crab species Potamonautes mutareensis and Potamonautes unispinus were recorded within the region of study. Potamonautes mutareensis was largely restricted to less impacted environments in the high mountainous river system, whereas P. unispinus was found in low laying areas. In stretches of river where both species were found to co-occur, the species were never sampled from the same site, with P. mutareensis occurring in shallower, faster flowing environments and P. unispinus in deeper, slow flowing sites. Interview results revealed that the local communities, particularly in the southern part of the Eastern Highlands around the Chipinge area, had a considerable level of utilisation (55% of households) on the harvesting of crabs for household consumption during the non-agricultural season (May to September). Results from the IUCN Red List assessment indicate that both species should be considered as "Least Concern". Threats to freshwater crabs in the Eastern Highlands, however, include widespread anthropogenic impacts such as habitat destruction associated with gold and diamond mining, inorganic and organic pollution and possibly exploitation for human consumption. The current study provides important information and insight towards the possible development of a freshwater crab conservation action plan within the region. PMID:26751064

  6. Ecological Assessment of Two Species of Potamonautid Freshwater Crabs from the Eastern Highlands of Zimbabwe, with Implications for Their Conservation

    PubMed Central

    Dalu, Tatenda; Sachikonye, Mwazvita T. B.; Froneman, William P.; Manungo, Kwanele I.; Bepe, Onias; Wasserman, Ryan J.

    2016-01-01

    The spatial ecology of freshwater crabs and their conservation status is largely understudied in Africa. An ecological assessment was conducted at 104 localities in 51 rivers and/or streams in the Eastern Highlands of Zimbabwe whereby the distribution and abundances of freshwater crab species were mapped and the possible drivers of the observed trends in population structure explored. In addition, information on crab utilisation as a food resource by local communities was assessed via face to face interviews across the region. Finally, the conservation status of each species was assessed using the IUCN Red List criteria. Only two crab species Potamonautes mutareensis and Potamonautes unispinus were recorded within the region of study. Potamonautes mutareensis was largely restricted to less impacted environments in the high mountainous river system, whereas P. unispinus was found in low laying areas. In stretches of river where both species were found to co-occur, the species were never sampled from the same site, with P. mutareensis occurring in shallower, faster flowing environments and P. unispinus in deeper, slow flowing sites. Interview results revealed that the local communities, particularly in the southern part of the Eastern Highlands around the Chipinge area, had a considerable level of utilisation (55% of households) on the harvesting of crabs for household consumption during the non-agricultural season (May to September). Results from the IUCN Red List assessment indicate that both species should be considered as “Least Concern”. Threats to freshwater crabs in the Eastern Highlands, however, include widespread anthropogenic impacts such as habitat destruction associated with gold and diamond mining, inorganic and organic pollution and possibly exploitation for human consumption. The current study provides important information and insight towards the possible development of a freshwater crab conservation action plan within the region. PMID:26751064

  7. Neurotoxic cyanobacterial toxins.

    PubMed

    Aráoz, Rómulo; Molgó, Jordi; Tandeau de Marsac, Nicole

    2010-10-01

    Worldwide development of cyanobacterial blooms has significantly increased in marine and continental waters in the last century due to water eutrophication. This phenomenon is favoured by the ability of planktonic cyanobacteria to synthesize gas vesicles that allow them to float in the water column. Besides, benthic cyanobacteria that proliferate at the bottom of lakes, rivers and costal waters form dense mats near the shore. Cyanobacterial massive proliferation is of public concern regarding the capacity of certain cyanobacterial strains to produce hepatotoxic and neurotoxic compounds that can affect public health, human activities and wild and stock animals. The cholinergic synapses and voltage-gated sodium channels constitute the targets of choice of cyanobacterial neurotoxins. Anatoxin-a and homoanatoxin-a are agonists of nicotinic acetylcholine receptors. Anatoxin-a(s) is an irreversible inhibitor of acetylcholinesterase. Saxitoxin, kalkitoxin and jamaicamide are blockers of voltage-gated sodium channels, whereas antillatoxin is an activator of such channels. Moreover the neurotoxic amino acid l-beta-N-methylamino-l-alanine was shown to be produced by diverse cyanobacterial taxa. Although controversial, increasing in vivo and in vitro evidence suggest a link between the ingestion of l-beta-N-methylamino-l-alanine and the development of amyotrophic lateral sclerosis/Parkinsonism-dementia complex, a neurodegenerative disease. This paper reviews the occurrence of cyanobacterial neurotoxins, their chemical properties, mode of action and biosynthetic pathways. PMID:19660486

  8. A new species of Dermoergasilus Ho & Do, 1982 (Copepoda: Ergasilidae) from freshwater fishes in the south-west of Western Australia.

    PubMed

    Hassan, Marina; Jones, Brian; Lymbery, Alan J

    2009-10-01

    A new species of Dermoergasilus Ho & Do, 1982 is described from freshwater fish hosts in the south west of Western Australia. D. occidentalis n. sp. differs from previously described species in the genus principally by the armature of the legs. The new species was found on the gills of the freshwater cobbler Tandanus bostocki Whitely and western minnow Galaxias occidentalis Ogilby in two different river systems. PMID:19731098

  9. Bacterial community structure in freshwater springs infested with the invasive plant species Hydrilla verticillata

    PubMed Central

    Gordon-Bradley, N.; Li, N.

    2015-01-01

    The phylogenetic composition and physiological profiles of bacterial communities in freshwater springs were evaluated during the blooming and non-blooming stages of the invasive plant species, Hydrilla verticillata. Community-level physiological profiles (CLPPs) and pyrosequencing of 16S rRNA gene amplicons were used to study potential Hydrilla mediated shifts in the physiological potential and phylogenetic composition of the bacterial community in infested systems. The results of CLPP revealed that the microbes in the Hydrilla invaded sites utilized less substrates during blooming periods than during nonblooming periods of the plant. Spearman’s rank correlation analysis showed some relationships between the relative abundances of bacterial taxa and the Biolog substrate utilization pattern. The relative abundance of the identified taxa showed some striking differences based on the blooming status of Hydrilla and to a lesser extent on site variation. The relative abundance of Actinobacteria, Bacteriodetes, and Verrucomicrobia was generally higher during Hydrilla blooms, while Deltaproteobacteria was generally higher during non-blooming stages of Hydrilla. The detected genera also varied based on the blooming stages of the plant. Based on the findings, it appears that Hydrilla alters the phylogenetic composition and structure of the bacterial community during the blooming stage. PMID:26207069

  10. Epistylis portoalegrensis n. sp. (Ciliophora, Peritrichia): A New Freshwater Ciliate Species from Southern Brazil.

    PubMed

    Kühner, Steffen; Simão, Taiz L L; Safi, Lúcia S L; Gazulha, Fernanda B; Eizirik, Eduardo; Utz, Laura R P

    2016-01-01

    The peritrich ciliate Epistylis portoalegrensis n. sp. was found in two bodies of freshwater located in Porto Alegre, Southern Brazil. Morphological features were investigated using live and protargol-stained specimens. The zooids presented a vase to cylindrical shape narrowed at the scopula, and a mean size of 131 × 37 μm in vivo. A C-shaped macronucleus lay in the middle of the cell close to a single contractile vacuole. The oral infraciliature was typical for the genus, with all infundibular polykineties composed by three distinct rows of kinetosomes. Colonies are often nonbranched with no lateral stalk, carrying several zooids stemming from a single point. Specimens from the two sampling sites showed identical arrangement of the infraciliature, similar morphometry, identical 18S rDNA sequences, and a single nucleotide difference across the more variable ITS regions. Molecular phylogenetic analyses placed E. portoalegrensis in a well-supported clade containing other Epistylis species, within the order Vorticellida. PMID:26198754

  11. Recombination Does Not Hinder Formation or Detection of Ecological Species of Synechococcus Inhabiting a Hot Spring Cyanobacterial Mat.

    PubMed

    Melendrez, Melanie C; Becraft, Eric D; Wood, Jason M; Olsen, Millie T; Bryant, Donald A; Heidelberg, John F; Rusch, Douglas B; Cohan, Frederick M; Ward, David M

    2015-01-01

    Recent studies of bacterial speciation have claimed to support the biological species concept-that reduced recombination is required for bacterial populations to diverge into species. This conclusion has been reached from the discovery that ecologically distinct clades show lower rates of recombination than that which occurs among closest relatives. However, these previous studies did not attempt to determine whether the more-rapidly recombining close relatives within the clades studied may also have diversified ecologically, without benefit of sexual isolation. Here we have measured the impact of recombination on ecological diversification within and between two ecologically distinct clades (A and B') of Synechococcus in a hot spring microbial mat in Yellowstone National Park, using a cultivation-free, multi-locus approach. Bacterial artificial chromosome (BAC) libraries were constructed from mat samples collected at 60°C and 65°C. Analysis of multiple linked loci near Synechococcus 16S rRNA genes showed little evidence of recombination between the A and B' lineages, but a record of recombination was apparent within each lineage. Recombination and mutation rates within each lineage were of similar magnitude, but recombination had a somewhat greater impact on sequence diversity than mutation, as also seen in many other bacteria and archaea. Despite recombination within the A and B' lineages, there was evidence of ecological diversification within each lineage. The algorithm Ecotype Simulation identified sequence clusters consistent with ecologically distinct populations (ecotypes), and several hypothesized ecotypes were distinct in their habitat associations and in their adaptations to different microenvironments. We conclude that sexual isolation is more likely to follow ecological divergence than to precede it. Thus, an ecology-based model of speciation appears more appropriate than the biological species concept for bacterial and archaeal diversification. PMID

  12. Recombination Does Not Hinder Formation or Detection of Ecological Species of Synechococcus Inhabiting a Hot Spring Cyanobacterial Mat

    PubMed Central

    Melendrez, Melanie C.; Becraft, Eric D.; Wood, Jason M.; Olsen, Millie T.; Bryant, Donald A.; Heidelberg, John F.; Rusch, Douglas B.; Cohan, Frederick M.; Ward, David M.

    2016-01-01

    Recent studies of bacterial speciation have claimed to support the biological species concept—that reduced recombination is required for bacterial populations to diverge into species. This conclusion has been reached from the discovery that ecologically distinct clades show lower rates of recombination than that which occurs among closest relatives. However, these previous studies did not attempt to determine whether the more-rapidly recombining close relatives within the clades studied may also have diversified ecologically, without benefit of sexual isolation. Here we have measured the impact of recombination on ecological diversification within and between two ecologically distinct clades (A and B') of Synechococcus in a hot spring microbial mat in Yellowstone National Park, using a cultivation-free, multi-locus approach. Bacterial artificial chromosome (BAC) libraries were constructed from mat samples collected at 60°C and 65°C. Analysis of multiple linked loci near Synechococcus 16S rRNA genes showed little evidence of recombination between the A and B' lineages, but a record of recombination was apparent within each lineage. Recombination and mutation rates within each lineage were of similar magnitude, but recombination had a somewhat greater impact on sequence diversity than mutation, as also seen in many other bacteria and archaea. Despite recombination within the A and B' lineages, there was evidence of ecological diversification within each lineage. The algorithm Ecotype Simulation identified sequence clusters consistent with ecologically distinct populations (ecotypes), and several hypothesized ecotypes were distinct in their habitat associations and in their adaptations to different microenvironments. We conclude that sexual isolation is more likely to follow ecological divergence than to precede it. Thus, an ecology-based model of speciation appears more appropriate than the biological species concept for bacterial and archaeal diversification

  13. Interaction between zinc and freshwater and marine diatom species: Surface complexation and Zn isotope fractionation

    NASA Astrophysics Data System (ADS)

    Gélabert, A.; Pokrovsky, O. S.; Viers, J.; Schott, J.; Boudou, A.; Feurtet-Mazel, A.

    2006-02-01

    This work is devoted to characterization of zinc interaction in aqueous solution with two marine planktonic ( Thalassiosira weissflogii = TW, Skeletonema costatum = SC) and two freshwater periphytic species ( Achnanthidium minutissimum = AMIN, Navicula minima = NMIN) by combining adsorption and electrophoretic measurements with surface complexation modeling and by assessing Zn isotopes fractionation during both long term uptake and short term adsorption on diatom cells and their frustules. Reversible adsorption experiments were performed at 25 and 5 °C as a function of exposure time (5 min to 140 h), pH (2 to 10), zinc concentration in solution (10 nM to 1 mM), ionic strength ( I = 0.001 to 1.0 M) and the presence of light. While the shape of pH-dependent adsorption edge is almost the same for all four species, the constant-pH adsorption isotherm and maximal Zn binding capacities differ by an order of magnitude. The extent of adsorption increases with temperature from 5 to 25 °C and does not depend on light intensity. Zinc adsorption decreases with increase of ionic strength suggesting competition with sodium for surface sites. Cell number-normalized concentrations of sorbed zinc on whole cells and their silica frustules demonstrated only weak contribution of the latter (10-20%) to overall zinc binding by diatom cell wall. Measurements of electrophoretic mobilities ( μ) revealed negative diatoms surface potential in the full range of zinc concentrations investigated (0.15-760 μmol/L), however, the absolute value of μ decreases at [Zn] > 15 μmol/L suggesting a change in surface speciation. These observations allowed us to construct a surface complexation model for Zn binding by diatom surfaces that postulates the constant capacitance of the electric double layer and considers Zn complexation with carboxylate and silanol groups. Thermodynamic and structural parameters of this model are based on previous acid-base titration and spectroscopic results and allow

  14. An eDNA Assay to Monitor a Globally Invasive Fish Species from Flowing Freshwater

    PubMed Central

    Adrian-Kalchhauser, Irene; Burkhardt-Holm, Patricia

    2016-01-01

    Ponto-Caspian gobies are a flock of five invasive fish species that have colonized freshwaters and brackish waters in Europe and North America. One of them, the round goby Neogobius melanostomus, figures among the 100 worst invaders in Europe. Current methods to detect the presence of Ponto-Caspian gobies involve catching or sighting the fish. These approaches are labor intense and not very sensitive. Consequently, populations are usually detected only when they have reached high densities and when management or containment efforts are futile. To improve monitoring, we developed an assay based on the detection of DNA traces (environmental DNA, or eDNA) of Ponto-Caspian gobies in river water. The assay specifically detects invasive goby DNA and does not react to any native fish species. We apply the assay to environmental samples and demonstrate that parameters such as sampling depth, sampling location, extraction protocol, PCR protocol and PCR inhibition greatly impact detection. We further successfully outline the invasion front of Ponto-Caspian gobies in a large river, the High Rhine in Switzerland, and thus demonstrate the applicability of the assay to lotic environments. The eDNA assay requires less time, equipment, manpower, skills, and financial resources than the conventional monitoring methods such as electrofishing, angling or diving. Samples can be taken by untrained individuals, and the assay can be performed by any molecular biologist on a conventional PCR machine. Therefore, this assay enables environment managers to map invaded areas independently of fishermen’s’ reports and fish community monitorings. PMID:26814998

  15. Where Are All the Fish: Potential of Biogeographical Maps to Project Current and Future Distribution Patterns of Freshwater Species

    PubMed Central

    Markovic, Danijela; Freyhof, Jörg; Wolter, Christian

    2012-01-01

    The dendritic structure of river networks is commonly argued against use of species atlas data for modeling freshwater species distributions, but little has been done to test the potential of grid-based data in predictive species mapping. Using four different niche-based models and three different climate change projections for the middle of the 21st century merged pairwise as well as within a consensus modeling framework, we studied the variability in current and future distribution patterns of 38 freshwater fish species across Germany. We used grid-based (11×11 km) fish distribution maps and numerous climatic, topographic, hydromorphologic, and anthropogenic factors derived from environmental maps at a finer scale resolution (250 m–1 km). Apart from the explicit predictor selection, our modeling framework included uncertainty estimation for all phases of the modeling process. We found that the predictive performance of some niche-based models is excellent independent of the predictor data set used, emphasizing the importance of a well-grounded predictor selection process. Though important, climate was not a primary key factor for any of the studied fish species groups, in contrast to substrate preferences, hierarchical river structure, and topography. Generally, distribution ranges of cold-water and warm-water species are expected to change significantly in the future; however, the extent of changes is highly uncertain. Finally, we show that the mismatch between the current and future ranges of climatic variables of more than 90% is the most limiting factor regarding reliability of our future estimates. Our study highlighted the underestimated potential of grid cell information in biogeographical modeling of freshwater species and provides a comprehensive modeling framework for predictive mapping of species distributions and evaluation of the associated uncertainties. PMID:22792361

  16. Terrathelphusa secula, a new species of semiterrestrial freshwater crab (Crustacea: Brachyura: Gecarcinucidae) from Sabah, East Malaysia, Borneo.

    PubMed

    Ng, Peter K L; Tan, Leo W H

    2015-01-01

    A new species of semiterrestrial gecarcinucid freshwater crab, Terrathelphusa secula, is described from Danum Valley in Sabah, East Malaysia, eastern Borneo. In the form of its carapace, third maxilliped, and male second gonopod, it most closely resembles T. ovis Ng, 1997, and T. telur Ng, 1997, from eastern Sarawak and Brunei, respectively. It differs markedly from these and other congeners in its proportionately much wider carapace, and a male first gonopod that is strongly curved and sickle-shaped. PMID:26623825

  17. Morphology and systematics of two freshwater urostylid ciliates, with description of a new species (Protista, Ciliophora, Hypotrichia).

    PubMed

    Pan, Xuming; Fan, Yangbo; Gao, Feng; Qiu, Zijian; Al-Farraj, Saleh A; Warren, Alan; Shao, Chen

    2016-02-01

    The morphology of two freshwater urostylid species, Neourostylopsis flava spec. nov. and Pseudourostyla subtropicaChen et al., 2014, isolated from freshwater ponds in northern and southern China, respectively, was investigated following examination of specimens in vivo and following protargol staining. Neourostylopsis flava spec. nov. is distinguished from its congeners by the following characteristics: body size 150-220 × 50-75 μm in vivo; yellow in colour; bright yellow to yellow-brownish spherical cortical granules densely arranged along marginal cirral rows and in irregular short rows on dorsal side; adoral zone with 40-55 membranelles; six to eight frontal, three or four buccal, two pretransverse ventral and seven to nine transverse cirri; 27-40 midventral pairs extending to about anterior 55% of cell; four or five left and four right marginal rows; freshwater habitat. A redescription of a freshwater population of P. subtropica is also provided. Phylogenetic analyses based on small subunit ribosomal DNA sequences shows that P. subtropica and N. flava spec. nov. group with their congeners and both Neourostylopsis and Pseudourostyla are monophyletic. PMID:26752607

  18. A new family, genus and species of freshwater amphipod Australomicroprotopus megacoxa gen. nov. sp. nov. (Senticaudata, Corophiidea, Microprotopoidea, Australomicroprotopidae fam. nov.) from Australia.

    PubMed

    Myers, Alan A; Lowry, James K; Billingham, Zac

    2016-01-01

    A new species of fresh-water amphipod is described from Australia. Australomicroprotopus megacoxa gen. nov. sp. nov. It is placed in a new family, the Australomicroprotopidae fam. nov. and is fully described and figured. PMID:27615940

  19. Characterization of the salt stress vulnerability of three invasive freshwater plant species using a metabolic profiling approach.

    PubMed

    Thouvenot, Lise; Deleu, Carole; Berardocco, Solenne; Haury, Jacques; Thiébaut, Gabrielle

    2015-03-01

    The effects of salt stress on freshwater plants has been little studied up to now, despite the fact that they are expected to present different levels of salt sensitivity or salt resistance depending on the species. The aim of this work was to assess the effect of NaCl at two concentrations on three invasive freshwater species, Elodea canadensis, Myriophyllum aquaticum and Ludwigia grandiflora, by examining morphological and physiological parameters and using metabolic profiling. The growth rate (biomass and stem length) was reduced for all species, whatever the salt treatment, but the response to salt differed between the three species, depending on the NaCl concentration. For E. canadensis, the physiological traits and metabolic profiles were only slightly modified in response to salt, whereas M. aquaticum and L. grandiflora showed great changes. In both of these species, root number, photosynthetic pigment content, amino acids and carbohydrate metabolism were affected by the salt treatments. Moreover, we are the first to report the salt-induced accumulation of compatible solutes in both species. Indeed, in response to NaCl, L. grandiflora mainly accumulated sucrose. The response of M. aquaticum was more complex, because it accumulated not only sucrose and myo-inositol whatever the level of salt stress, but also amino acids such as proline and GABA, but only at high NaCl concentrations. These responses are the metabolic responses typically found in terrestrial plants. PMID:25544588

  20. Fish composition and species richness in eastern South American coastal lagoons: additional support for the freshwater ecoregions of the world.

    PubMed

    Petry, A C; Guimarães, T F R; Vasconcellos, F M; Hartz, S M; Becker, F G; Rosa, R S; Goyenola, G; Caramaschi, E P; Díaz de Astarloa, J M; Sarmento-Soares, L M; Vieira, J P; Garcia, A M; Teixeira de Mello, F; de Melo, F A G; Meerhoff, M; Attayde, J L; Menezes, R F; Mazzeo, N; Di Dario, F

    2016-07-01

    The relationships between fish composition, connectivity and morphometry of 103 lagoons in nine freshwater ecoregions (FEOW) between 2·83° S and 37·64° S were evaluated in order to detect possible congruence between the gradient of species richness and similarities of assemblage composition. Most lagoons included in the study were <2 km(2) , with a maximum of 3975 km(2) in surface area. Combined surface area of all lagoons included in the study was 5411 km(2) . Number of species varied locally from one to 76. A multiple regression revealed that latitude, attributes of morphometry and connectivity, and sampling effort explained a large amount of variability in species richness. Lagoon area was a good predictor of species richness except in low latitude ecoregions, where lagoons are typically small-sized and not affected by marine immigrants, and where non-native fish species accounted for a significant portion of species richness. Relationships between species and area in small-sized lagoons (<2 km(2) ) is highly similar to the expected number in each ecoregion, with systems located between 18·27° S and 30·15° S attaining higher levels of species richness. Similarities in species composition within the primary, secondary and peripheral or marine divisions revealed strong continental biogeographic patterns only for species less tolerant or intolerant to salinity. Further support for the FEOW scheme in the eastern border of South America is therefore provided, and now includes ecotonal systems inhabited simultaneously by freshwater and marine species of fishes. PMID:27401481

  1. Eukaryotes in Arctic and Antarctic cyanobacterial mats.

    PubMed

    Jungblut, Anne D; Vincent, Warwick F; Lovejoy, Connie

    2012-11-01

    Cyanobacterial mats are commonly found in freshwater ecosystems throughout the polar regions. Most mats are multilayered three-dimensional structures with the filamentous cyanobacteria embedded in a gel-like matrix. Although early descriptions mentioned the presence of larger organisms including metazoans living in the mats, there have been few studies specifically focused on the microbial eukaryotes, which are often small cells with few morphological features suitable for identification by microscopy. Here, we applied 18S rRNA gene clone library analysis to identify eukaryotes in cyanobacterial mat communities from both the Antarctic and the extreme High Arctic. We identified 39 ribotypes at the level of 99% sequence similarity. These consisted of taxa within algal and other protist groups including Chlorophyceae, Prasinophyceae, Ulvophyceae, Trebouxiophyceae, Bacillariophyceae, Chrysophyceae, Ciliophora, and Cercozoa. Fungi were also recovered, as were 21 metazoan ribotypes. The eukaryotic taxa appeared habitat-specific with little overlap between lake, pond, and ice shelf communities. Some ribotypes were common to both Arctic and Antarctic mats, suggesting global dispersal of these taxa and similarity in the environmental filters acting on protist communities. Many of these eukaryotic taxa likely benefit from protected, nutrient-rich microhabitats within the cyanobacterial mat environment. PMID:22630054

  2. A new species of Dactylogyrus (Monogenea: Dactylogyridae) parasitic on an endangered freshwater fish, Rhodeus atremius atremius, endemic to Japan.

    PubMed

    Nitta, Masato; Nagasawa, Kazuya

    2016-10-01

    A new dactylogyrid monogenean Dactylogyrus bicorniculus sp. nov. is described from the gills of the kazetoge bitterling, Rhodeus atremius atremius (Jordan and Thompson, 1914), an endemic species in Japan, from Saga Prefecture, northern Kyūshū. D. bicorniculus sp. nov. resembles Dactylogyrus bicornis Malevitskaja, 1941 and Dactylogyrus lophogonus Zhang and Ji, 1980 because they have two common features, a large V-shaped ventral bar and well-developed second marginal hooks. However, the new species is distinguished from these congeners by a shorter penis and an accessory piece. A phylogenetic analysis of 28S rDNA shows that D. bicorniculus sp. nov. is a basal species with the T-shaped ventral bar in the genus. The new species has strict host-specificity to R. a. atremius, one of the endangered freshwater fishes in Japan, and may face the danger of co-extinction with its host. PMID:27377236

  3. Surveys of endogenous retroviruses (ERVs) in the freshwater crocodile (Crocodylus johnstoni) suggest that ERVs in Crocodylus spp. vary between species.

    PubMed

    Chong, Amanda Y; Kjeldsen, Shannon R; Gongora, Jaime

    2015-04-01

    Endogenous retroviruses (ERVs) are one of many families of transposable elements present in vertebrate genomes. We have examined the ERV complement of the freshwater crocodile (Crocodylus johnstoni) in order to investigate the diversity of ERVs present and possibility of ERV or retroviral activity in a diseased individual of this species. Amplification and sequencing of the highly conserved retroviral pro-pol domains revealed high levels of sequence variation in these ERVs. Phylogenetic analyses of these ERVs and those previously identified in other crocodilian species suggest that although many crocodilians share the same ERV lineages, the relative numbers of retroelement insertions from each of these lineages may vary greatly between species. The data generated in this study provide evidence for the presence of a unique and varied complement of ERVs in crocodilians. This study has also demonstrated the presence of species-specific evolution in ancient retroviral infections. PMID:25653017

  4. Selenium:Mercury Molar Ratios in Freshwater Fish from Tennessee: Individual, Species, and Geographical Variations have Implications for Management

    PubMed Central

    Burger, Joanna; Gochfeld, Michael; Jeitner, C.; Donio, M.; Pittfield, T.

    2014-01-01

    Vertebrates, including humans, can experience adverse effects from mercury consumed in fish. Humans often prefer large predatory fish that bioaccumulate high mercury levels. Recent attention has focused on the role of selenium countering mercury toxicity, but there is little research on the selenium:mercury molar ratios in freshwater fish. We examine selenium:mercury molar ratios in freshwater fish from Tennessee at Poplar Creek which receives ongoing inputs of mercury from the Department of Energy’s Oak Ridge Y-12 facility. Our objective was to determine variation of the ratios within species that might affect the protectiveness of selenium against mercury toxicity. Within species, the ratio was correlated significantly and positively with fish length only for two species. There was great individual variation in the selenium:mercury molar ratio within each species, except striped bass. The lack of a clear relationship between the selenium:mercury molar ratio and fish length, and the intraspecific variation, suggests that it would be difficult to use the molar ratio in predicting either the risk from mercury toxicity or in devising consumption advisories. PMID:22456727

  5. Selenium:mercury molar ratios in freshwater fish from Tennessee: individual, species, and geographical variations have implications for management.

    PubMed

    Burger, Joanna; Gochfeld, Michael; Jeitner, C; Donio, M; Pittfield, T

    2012-06-01

    Vertebrates, including humans, can experience adverse effects from mercury consumed in fish. Humans often prefer large predatory fish that bioaccumulate high mercury levels. Recent attention has focused on the role of selenium countering mercury toxicity, but there is little research on the selenium:mercury molar ratios in freshwater fish. We examine selenium:mercury molar ratios in freshwater fish from Tennessee at Poplar Creek which receives ongoing inputs of mercury from the Department of Energy's Oak Ridge Y-12 facility. Our objective was to determine variation of the ratios within species that might affect the protectiveness of selenium against mercury toxicity. Within species, the ratio was correlated significantly and positively with fish length only for two species. There was great individual variation in the selenium:mercury molar ratio within each species, except striped bass. The lack of a clear relationship between the selenium:mercury molar ratio and fish length, and the intraspecific variation, suggests that it would be difficult to use the molar ratio in predicting either the risk from mercury toxicity or in devising consumption advisories. PMID:22456727

  6. Variation in cyanobacterial hepatotoxin (microcystin) content of water samples and two species of fishes collected from a shallow lake in Algeria.

    PubMed

    Amrani, Amina; Nasri, Hichem; Azzouz, Amina; Kadi, Yacine; Bouaïcha, Noureddine

    2014-04-01

    Microcystins (MCs) produced from cyanobacteria can accumulate in freshwater fish tissues. In this study, variations in these toxins content were examined monthly in water samples and two species of fish in Lake Oubeira, Algeria, from April 2010 to March 2011. During the study period, MCs were analyzed using protein phosphatase type 2A (PP2A) inhibition assay. In lake water, total (dissolved and intracellular toxins) MC concentrations by PP2A ranged from 0.028 to 13.4 μg equivalent MC-LR/l, with a peak in September 2010. MC-LR was the dominant variant (90 % of the total) in water samples, followed by MC-YR and MC-(H4)YR. The highest MC concentration in the omnivorous common carp (Cyprinus carpio) was found in the order intestine > hepatopancreas > muscle; however, in the carnivorous European eel (Anguilla anguilla) the order was liver > intestine > muscle. Highest MC concentrations in the intestine tissue of the common carp were found between August and November 2010 where high MC concentrations were detected in water samples, whereas high levels of MCs in the liver of the European eel were found later between January and February 2011. During the entire period of study, the World Health Organization (WHO) lifetime limit for tolerable daily intake was exceeded only in common carp muscle. PMID:24445842

  7. HABITAT USE OF TWENTY-FIVE COMMON SPECIES OF OREGON FRESHWATER FISHES

    EPA Science Inventory

    This study had two objectives. he first was to determine the use of the physical habitat by the 25 most common native freshwater fishes of Oregon, and the second was to evaluate the use of a large computer database of museum records in the determination. he database encompasses 2...

  8. The freshwater sponge Ephydatia fluviatilis harbours diverse Pseudomonas species (Gammaproteobacteria, Pseudomonadales) with broad-spectrum antimicrobial activity.

    PubMed

    Keller-Costa, Tina; Jousset, Alexandre; van Overbeek, Leo; van Elsas, Jan Dirk; Costa, Rodrigo

    2014-01-01

    Bacteria are believed to play an important role in the fitness and biochemistry of sponges (Porifera). Pseudomonas species (Gammaproteobacteria, Pseudomonadales) are capable of colonizing a broad range of eukaryotic hosts, but knowledge of their diversity and function in freshwater invertebrates is rudimentary. We assessed the diversity, structure and antimicrobial activities of Pseudomonas spp. in the freshwater sponge Ephydatia fluviatilis. Polymerase Chain Reaction--Denaturing Gradient Gel Electrophoresis (PCR-DGGE) fingerprints of the global regulator gene gacA revealed distinct structures between sponge-associated and free-living Pseudomonas communities, unveiling previously unsuspected diversity of these assemblages in freshwater. Community structures varied across E. fluviatilis specimens, yet specific gacA phylotypes could be detected by PCR-DGGE in almost all sponge individuals sampled over two consecutive years. By means of whole-genome fingerprinting, 39 distinct genotypes were found within 90 fluorescent Pseudomonas isolates retrieved from E. fluviatilis. High frequency of in vitro antibacterial (49%), antiprotozoan (35%) and anti-oomycetal (32%) activities was found among these isolates, contrasting less-pronounced basidiomycetal (17%) and ascomycetal (8%) antagonism. Culture extracts of highly predation-resistant isolates rapidly caused complete immobility or lysis of cells of the protozoan Colpoda steinii. Isolates tentatively identified as P. jessenii, P. protegens and P. oryzihabitans showed conspicuous inhibitory traits and correspondence with dominant sponge-associated phylotypes registered by cultivation-independent analysis. Our findings suggest that E. fluviatilis hosts both transient and persistent Pseudomonas symbionts displaying antimicrobial activities of potential ecological and biotechnological value. PMID:24533086

  9. The Freshwater Sponge Ephydatia fluviatilis Harbours Diverse Pseudomonas Species (Gammaproteobacteria, Pseudomonadales) with Broad-Spectrum Antimicrobial Activity

    PubMed Central

    Keller-Costa, Tina; Jousset, Alexandre; van Overbeek, Leo; van Elsas, Jan Dirk; Costa, Rodrigo

    2014-01-01

    Bacteria are believed to play an important role in the fitness and biochemistry of sponges (Porifera). Pseudomonas species (Gammaproteobacteria, Pseudomonadales) are capable of colonizing a broad range of eukaryotic hosts, but knowledge of their diversity and function in freshwater invertebrates is rudimentary. We assessed the diversity, structure and antimicrobial activities of Pseudomonas spp. in the freshwater sponge Ephydatia fluviatilis. Polymerase Chain Reaction – Denaturing Gradient Gel Electrophoresis (PCR-DGGE) fingerprints of the global regulator gene gacA revealed distinct structures between sponge-associated and free-living Pseudomonas communities, unveiling previously unsuspected diversity of these assemblages in freshwater. Community structures varied across E. fluviatilis specimens, yet specific gacA phylotypes could be detected by PCR-DGGE in almost all sponge individuals sampled over two consecutive years. By means of whole-genome fingerprinting, 39 distinct genotypes were found within 90 fluorescent Pseudomonas isolates retrieved from E. fluviatilis. High frequency of in vitro antibacterial (49%), antiprotozoan (35%) and anti-oomycetal (32%) activities was found among these isolates, contrasting less-pronounced basidiomycetal (17%) and ascomycetal (8%) antagonism. Culture extracts of highly predation-resistant isolates rapidly caused complete immobility or lysis of cells of the protozoan Colpoda steinii. Isolates tentatively identified as P. jessenii, P. protegens and P. oryzihabitans showed conspicuous inhibitory traits and correspondence with dominant sponge-associated phylotypes registered by cultivation-independent analysis. Our findings suggest that E. fluviatilis hosts both transient and persistent Pseudomonas symbionts displaying antimicrobial activities of potential ecological and biotechnological value. PMID:24533086

  10. Effect of postmining waters on cyanobacterial photosynthesis.

    PubMed

    Medová, Hana; Přikryl, Ivo; Zapomnĕlová, Eliška; Pechar, Libor

    2015-02-01

    New waterbodies have been created in a postmining area of the brown-coal basin in Sokolov, Czech Republic. The former open-cast quarry, Medard, has been filling with water from a local river, the surrounding catchment spoil heaps, and acid mine drainages. The effect of acidic (pH down to 2.5) and high-conductivity water (up to 1400 mS/m) on selected cyanobacteria and the possibility of cyanobacterial water bloom in the newly formed Lake Medard were studied by means of chlorophyll fluorometry (actual photosystem II [PSII] quantum yield, ΔF/Fm', and relative electron transport rate, rETR). The acidic spoil-heap waters caused a decrease in cyanobacterial photosynthetic activity of 52 to 100% of the initial ΔF/Fm' value. The Dolichospermum strains were about 10 times more sensitive than Microcystis viridis. The high concentration of dissolved ions appeared to have less effect on cyanobacterial PSII. Although the bottom meta- and hypolimnion layers were proven to negatively influence the cyanobacteria, the perennial stratification of the lake does not enable the water characteristics of the upper layers to change extensively and thus possibly suppresses the undesirable cyanobacterial bloom. The response of cyanobacteria to spoil-heap waters appears to be species-specific and can promote selection of those resistant to postmining environments. PMID:25790520

  11. Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species.

    PubMed

    Harrisson, K; Pavlova, A; Gan, H M; Lee, Y P; Austin, C M; Sunnucks, P

    2016-06-01

    Climatic differences across a taxon's range may be associated with specific bioenergetic demands and may result in genetics-based metabolic adaptation, particularly in aquatic ectothermic organisms that rely on heat exchange with the environment to regulate key physiological processes. Extending down the east coast of Australia, the Great Dividing Range (GDR) has a strong influence on climate and the evolutionary history of freshwater fish species. Despite the GDR acting as a strong contemporary barrier to fish movement, many species, and species with shared ancestries, are found on both sides of the GDR, indicative of historical dispersal events. We sequenced complete mitogenomes from the four extant species of the freshwater cod genus Maccullochella, two of which occur on the semi-arid, inland side of the GDR, and two on the mesic coastal side. We constructed a dated phylogeny and explored the relative influences of purifying and positive selection in the evolution of mitogenome divergence among species. Results supported mid- to late-Pleistocene divergence of Maccullochella across the GDR (220-710 thousand years ago), bringing forward previously reported dates. Against a background of pervasive purifying selection, we detected potentially functionally relevant fixed amino acid differences across the GDR. Although many amino acid differences between inland and coastal species may have become fixed under relaxed purifying selection in coastal environments rather than positive selection, there was evidence of episodic positive selection acting on specific codons in the Mary River coastal lineage, which has consistently experienced the warmest and least extreme climate in the genus. PMID:26883183

  12. Metagenomic Study of Iron Homeostasis in Iron Depositing Hot Spring Cyanobacterial Community

    NASA Technical Reports Server (NTRS)

    Brown, I.; Franklin H.; Tringe, S. G.; Klatt, C. G.; Bryant, D. A.; Sarkisova, S. A.; Guevara, M.

    2010-01-01

    Introduction: It is not clear how an iron-rich thermal hydrosphere could be hospitable to cyanobacteria, since reduced iron appears to stimulate oxidative stress in all domains of life and particularly in oxygenic phototrophs. Therefore, metagenomic study of cyanobacterial community in iron-depositing hot springs may help elucidate how oxygenic prokaryotes can withstand the extremely high concentrations of reactive oxygen species (ROS) produced by interaction between environmental Fe2+ and O2. Method: Anchor proteins from various species of cyanobacteria and some anoxygenic phototrophs were selected on the basis of their hypothetical role in Fe homeostasis and the suppression of oxidative stress and were BLASTed against the metagenomes of iron-depositing Chocolate Pots and freshwater Mushroom hot springs. Results: BLASTing proteins hypothesized to be involved in Fe homeostasis against the microbiomes from the two springs revealed that iron-depositing hot spring has a greater abundance of defensive proteins such as bacterioferritin comigratory protein (Bcp) and DNA-binding Ferritin like protein (Dps) than a fresh-water hot spring. One may speculate that the abundance of Bcp and Dps in an iron-depositing hot spring is connected to the need to suppress oxidative stress in bacteria inhabiting environments with high Fe2+ concnetration. In both springs, Bcp and Dps are concentrated within the cyanobacterial fractions of the microbial community (regardless of abundance). Fe3+ siderophore transport (from the transport system permease protein query) may be less essential to the microbial community of CP because of the high [Fe]. Conclusion: Further research is needed to confirm that these proteins are unique to photoautotrophs such as those living in iron-depositing hot spring.

  13. Out of the Sichuan Basin: Rapid species diversification of the freshwater crabs in Sinopotamon (Decapoda: Brachyura: Potamidae) endemic to China.

    PubMed

    Ji, Yongkun; Sun, Yufang; Gao, Wei; Chu, Kelin; Wang, Ruicong; Zhao, Qiang; Sun, Hongying

    2016-07-01

    Sinopotamon Bott, 1967 is the most speciose and widely distributed freshwater crab genus in East Asia. Our extensive sampling includes about 76% of the known Sinopotamon taxa, and nearly covers its entire distribution area. Based on mitochondrial cytochrome oxidase I (COI) and 16S rRNA, as well as nuclear 28S rRNA and histone H3, we reconstructed the Sinopotamon phylogeny using maximum likelihood and Bayesian approaches. The divergence time was estimated and multiple methods were used to conduct diversification analyses. The ancestral geographic distribution and character state were reconstructed. Three main clades (Clades I, II and III) that roughly correspond to their main geographic distribution ranges were recovered. Our results challenge the current view of the four major species groups based on the morphological differences in the male first gonopod (G1). The most recent common ancestor of Sinopotamon most likely originated from the Sichuan Basin and surrounding mountains (SBSM) and subsequently dispersed throughout central and eastern China. The exceptionally rapid, recent diversification was detected in Clade II. The high incidence of species-level non-monophyly found in Clade II can be explained by recent rapid radiation. Climatic changes, morphological innovations, range expansion and geographical heterogeneity may all contribute to the diversification in Sinopotamon. This study contributes to our knowledge on diversification of freshwater benthic macro-invertebrates in the East Asian inland ecosystem. PMID:27058122

  14. Mercury and selenium concentrations in muscle tissue of different species of predatory freshwater fish and correlation between these elements.

    PubMed

    Strapáč, Imrich; Sokol, Jozef; Žatko, Daniel; Baranová, Mária

    2012-01-01

    Concentrations of total mercury and selenium were determined in 49 and 42 muscle tissue samples, respectively, of six species of predatory freshwater fish, dace (Leuciscus leuciscus), pike perch (Sander lucioperca), pike (Esox lucius), European catfish (Silurus glanis), rainbow trout (Oncorhynchus mykiss) and asp (Aspius aspius). Muscle selenium concentration did not correlate with the corresponding total mercury concentration (R² < 0.198) in all examined predatory fish species. There was an inverse correlation between the ratio Se/Hg content and the total mercury content in the muscle tissues of dace, pike perch, pike, European catfish and asp. The muscle tissue of rainbow trout exhibits a linear correlation between the ratio Se/Hg content and the total mercury content. The total mercury concentration of all examined samples did not exceed the hygienic limit for Hg for predatory fish. PMID:24779785

  15. Aletheiana tenella, a new genus and new species of freshwater hymenosomatid crab (Crustacea: Decapoda: Brachyura) from Central Sulawesi, Indonesia.

    PubMed

    Ng, Peter K L; Lukhaup, Christian

    2015-01-01

    A new genus and new species of free-living hymenosomatid crab, Aletheiana tenella, is described from Central Sulawesi, Indonesia. The two known Sulawesi hymenosomatid species, Cancrocaeca xenomorpha Ng, 1991, and Sulaplax ensifer Naruse, Ng & Guinot, 2008, are both from cave habitats. Aletheiana gen. nov. is most similar to Neorhynchoplax Sakai, 1938 (from freshwater and intertidal habitats in the Indo-West Pacific), and Sulaplax, but can be distinguished by its front possessing only one subventral rostral lobe, the base of the antenna is positioned between the base of the ocular peduncle and antennular fossa, the posterior margin of the epistome has two low, rounded median lobes, the merus of the third maxilliped is elongated, the ambulatory dactylus has a prominent subdistal spine, the cutting edges of the chela are armed with distinct teeth proximally, and the male abdomen is slender and elongate with the telson linguiform. PMID:26624469

  16. Prodigious polyphyly in imperilled freshwater pearly-mussels (Bivalvia: Unionidae): a phylogenetic test of species and generic designations

    USGS Publications Warehouse

    Lydeard, Charles; Minton, Russell L.; Williams, James D.

    2000-01-01

    Unionid bivalves or freshwater pearly-mussels (Unionoidea: Unionidae) serve as an exemplary system for examining many of the problems facing systematists and conservation biologists today. Most of the species and genera were described in the late 1800s and early 1900s, but few phylogenetic studies have been conducted to test conventional views of species and classification. Pearly-mussels of Gulf Coastal drainages of the southeastern United States from the Escambia (southern Alabama to Florida) to the Suwannee Rivers (Florida) are a unique fauna comprised of approximately 100 species, with about 30 endemic to the region. In this study, mitochondrial cytochrome c oxidase subunit I and 16S rRNA gene sequences were used to test the monophyly and to estimate evolutionary relationships of five unionid species representing three different genera. The molecular phylogenies depict all three genera as polyphyletic. The prodigious polyphyly exhibited within unionids is due to incorrect notions of homology and false assumptions about missing anatomical data. In contrast, the molecular phylogeny provides evidence to support the recognition of all five unionid species as distinct evolutionary entities. Furthermore, molecular genealogical evidence supports the elevation of Quincuncina infucata (Conrad) of the Suwannee River to species level, for which Q. kleiniana (Lea) is available.

  17. Light-Induced Changes in Fatty Acid Profiles of Specific Lipid Classes in Several Freshwater Phytoplankton Species

    PubMed Central

    Wacker, Alexander; Piepho, Maike; Harwood, John L.; Guschina, Irina A.; Arts, Michael T.

    2016-01-01

    We tested the influence of two light intensities [40 and 300 μmol PAR / (m2s)] on the fatty acid composition of three distinct lipid classes in four freshwater phytoplankton species. We chose species of different taxonomic classes in order to detect potentially similar reaction characteristics that might also be present in natural phytoplankton communities. From samples of the bacillariophyte Asterionella formosa, the chrysophyte Chromulina sp., the cryptophyte Cryptomonas ovata and the zygnematophyte Cosmarium botrytis we first separated glycolipids (monogalactosyldiacylglycerol, digalactosyldiacylglycerol, and sulfoquinovosyldiacylglycerol), phospholipids (phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, and phosphatidylserine) as well as non-polar lipids (triacylglycerols), before analyzing the fatty acid composition of each lipid class. High variation in the fatty acid composition existed among different species. Individual fatty acid compositions differed in their reaction to changing light intensities in the four species. Although no generalizations could be made for species across taxonomic classes, individual species showed clear but small responses in their ecologically-relevant omega-3 and omega-6 polyunsaturated fatty acids (PUFA) in terms of proportions and of per tissue carbon quotas. Knowledge on how lipids like fatty acids change with environmental or culture conditions is of great interest in ecological food web studies, aquaculture, and biotechnology, since algal lipids are the most important sources of omega-3 long-chain PUFA for aquatic and terrestrial consumers, including humans. PMID:27014290

  18. Coexistence of two freshwater turtle species along a Mediterranean stream: The role of spatial and temporal heterogeneity

    NASA Astrophysics Data System (ADS)

    Segurado, Pedro; Figueiredo, Diogo

    2007-09-01

    In the Iberian Peninsula the European pond turtle ( Emys orbicularis) and the Mediterranean pond turtle ( Mauremys leprosa) share many freshwater habitats, in particular Mediterranean streams. Whether and how these two species divide space within those habitats is poorly known in part due to the very low abundance of E. orbicularis at most syntopic sites. The spatial coexistence of these two species was studied along a 1.3 km reach of a typical Mediterranean stream based on data from trapping sessions and basking counts. The effect of the hydrological regime on differences in space use between species was also assessed. Spatial associations between species and between each species and microhabitat descriptors were estimated using a permutation procedure to account for spatial autocorrelation. Differences in the use of space were also estimated using a resample technique to account for the small sample sizes of E. orbicularis. Results indicate that E. orbicularis shows a preference for temporary, shallow, well vegetated and sandy reaches, while M. leprosa is less selective regarding microhabitat. Differences between E. orbicularis and juveniles of M. leprosa were less obvious. The high spatial heterogeneity of Mediterranean streams may be responsible for the persistence of viable populations of E. orbicularis as well as favouring the coexistence of the two turtle species. Therefore, stream habitat management and conservation plans for E. orbicularis should give priority to the maintenance of high levels of heterogeneity along Mediterranean streams.

  19. Molecular Analysis of the Freshwater Prawn Macrobrachium olfersii (Decapoda, Palaemonidae) Supports the Existence of a Single Species throughout Its Distribution

    PubMed Central

    Rossi, Natália; Mantelatto, Fernando Luis

    2013-01-01

    Macrobrachium olfersii is an amphidromous freshwater prawn, widespread along the eastern coasts of the Americas. This species shows great morphological modifications during ontogenesis, and several studies have verified the existence of a wide intraspecific variation. Because of this condition, the species is often misidentified, and several synonyms have been documented. To elucidate these aspects, individuals of M. olfersii from different populations along its range of distribution were investigated. The taxonomic limit was established, and the degree of genetic variability of this species was described. We extracted DNA from 53 specimens of M. olfersii, M. americanum, M. digueti and M. faustinum, which resulted in 84 new sequences (22 of 16S mtDNA, 45 of Cythocrome Oxidase I (COI) mtDNA, and 17 of Histone (H3) nDNA). Sequences of three genes (single and concatenated) from these species were used in the Maximum Likelihood and Bayesian Inference phylogenetic analyses and COI sequences from M. olfersii were used in population analysis. The genetic variation was evaluated through the alignment of 554 bp from the 16S, 638 bp from the COI, and 338 bp from the H3. The rates of genetic divergence among populations were lower at the intraspecific level. This was confirmed by the haplotype net, which showed a continuous gene flow among populations. Although a wide distribution and high morphological intraspecific variation often suggest the existence of more than one species, genetic similarity of Caribbean and Brazilian populations of M. olfersii supported them as a single species. PMID:23382941

  20. A new species of freshwater mussel (Bivalvia: Unionidae), Pleurobema athearni, from the Coosa River Drainage of Alabama, USA

    USGS Publications Warehouse

    Gangloff, M.M.; Williams, J.D.; Feminella, J.W.

    2006-01-01

    The Mobile Basin historically supported one of the most diverse freshwater mussel (Bivalvia: Unionidae) assemblages in North America. More than 65 species of mussels are known from the Basin, but it is difficult to determine how many species were present historically. The drainage's unique physical habitat was largely destroyed between the late 1800s and mid-1900s by impoundment and channel modifications of most of the larger rivers. Many species that were once common are now restricted to small headwater rivers and mid-sized tributaries. Recent Coosa River tributary surveys revealed a new, undescribed species of Pleurobema. This new species, Pleurobema athearni, is distinctive in outward appearance, shell morphometry and reproductive morphology, and can be distinguished from other Coosa River drainage unionids. Our analysis indicates that P. athearni is morphologically different from other similar taxa. It differs both in shell width/length and width/height ratios and thus provides a simple, quantitative means to differentiate this species from P. georgianum (Lea, 1841) Fusconaia barnesiana (Lea, 1838), and F. cerina (Conrad, 1838), which it superficially resembles and that also occur in the area. Our morphological diagnosis of this species is supported by recent molecular analyses that suggest this species is a Pleurobema and one closely related to other endemic Coosa River drainage unionids. The discovery of a new species of large, long-lived macroinvertebrate from a relatively well-sampled drainage in a populated region of the southeast United States underscores the need for more detailed surveys in isolated stretches of tributary streams. It should also serve as a reminder that almost 40 species of aquatic mollusks have been extirpated from the Mobile Basin before anything could be learned about their habitat or life history requirements. Copyright ?? 2006 Magnolia Press.

  1. Detection of microcystins in Pamvotis lake water and assessment of cyanobacterial bloom toxicity.

    PubMed

    Papadimitriou, Theodoti; Armeni, Euthimia; Stalikas, Constantine D; Kagalou, Ifigeneia; Leonardos, Ioannis D

    2012-05-01

    Lake Pamvotis is a shallow, eutrophic Mediterranean lake with ecological significance. This paper deals with the evaluation of cyanobacterial toxicity in Lake Pamvotis. ELISA and HPLC revealed the presence of significant amounts of MCYST-LR. Danio rerio bioassay confirmed the toxic nature of the bloom. Cyanobacterial extracts had adverse toxic effects on development of D. rerio. Also, it was shown that cyanobacterial extracts containing environmentally detected concentrations of MCYST can cause reduced survival rate of fish species. The results clearly indicate that cyanobacterial blooms in Lake Pamvotis may be regarded as human and fish health hazard. Continuous monitoring of the lake is suggested, in order to prevent future possible intoxications. PMID:21713485

  2. [Freshwater macroinvertebrates from Cocos Island, Costa Rica: species and comparison with other islands of the Eastern Tropical Pacific].

    PubMed

    Gutiérrez-Fonseca, Pablo E; Ramírez, Alonso; Umaña, Gerardo; Springer, Monika

    2013-06-01

    Freshwater macroinvertebrates from Cocos Island, Costa Rica: species and comparison with other islands of the Eastern Tropical Pacific. Cocos Island is an oceanic island in the Eastern Pacific, at 496km from Cabo Blanco, Costa Rica. This 24 km2 island is surrounded by a protected marine area of 9640 km2. it was declared National Park in 1978 and a World Heritage by UNESCO in 1997. Freshwater macroinvertebrate fauna was collected in 20 sites covering three rivers (Genio, Chatam and Sucio) and two creeks (Minuto and an unnamed creek behind the park rangers' house). Tank bromeliads or phytotelmata were also examined for aquatic macroinvertebrates. Physicochemical parameters were determined in 13 study sites. Additionally, a comparison with other islands in the Eastern Tropical Pacific was conducted to determine the most important factors controlling the diversity in Tropical Pacific islands. A total of 455 individuals were collected belonging to 20 taxa (mostly identified to genus level) from 15 families of aquatic insects. Other macroinvertebrates such as Palaemonid shrimps, Hidrachnida and Oligochaeta were also collected. The family Staphylinidae (Coleoptera) was the most abundant, followed by Chironomidae (Diptera). Diptera was the order of insects with the highest taxonomic richness. A relationship between distance and the number of families was observed supporting the premises of the Theory of island Biogeography. This relationship was improved by correcting area by island elevation, indicating that mountainous islands had the richest faunas, potentially due to high cloud interception that feeds freshwater environments favoring the establishment of aquatic fauna. Physicochemical variables were similar in all sites, possibly due to the geology and the absence of significant sources of pollution on the island. PMID:23885581

  3. Temperature effects on survival and DNA repair in four freshwater cladoceran Daphnia species exposed to UV radiation.

    PubMed

    Connelly, Sandra J; Moeller, Robert E; Sanchez, Guillermo; Mitchell, David L

    2009-01-01

    The biological responses of four freshwater daphniid species, Daphnia middendorffiana, D. pulicaria, D. pulex and D. parvula, to a single acute dose of ultraviolet B radiation (UVB) were compared. In addition to survival, we compared the induction of DNA damage (i.e. cyclobutane pyrimidine dimers) between species as well as the ability to repair this damage in the presence or absence of photoreactivating light. All four species showed high levels of shielding against DNA damage when compared to damage induced in purified DNA dosimeters at the same time and dose. Significant variation in survival was observed between species depending on temperature and light conditions. Contrary to our expectations, all species showed significantly higher survival and light-dependent DNA damage removal rates at 10 degrees C compared to 20 degrees C, suggesting that the enhanced rate of photoenzymatic repair (PER) at the lower temperature contributed significantly to the recovery of these organisms from UVB. PER was highly effective in promoting survival of three of the four species at 10 degrees C, but at 20 degrees C it was only partially effective in two species, and ineffective in two others. None of the species showed significant dark repair at 20 degrees C and only D. pulicaria showed a significant capacity at 10 degrees C. Two species, D. middendorffiana and D. pulex, showed some short-term survival at 10 degrees C in absence of PER despite their inability to repair any appreciable amount of DNA damage in the dark. All species died rapidly at 20 degrees C in absence of PER, as predicted from complete or near-absence of nucleotide excision repair (NER). Overall, the protective effects of tissue structure and pigmentation were similar in all Daphnia species tested and greatly mitigated the absorption of UVB by DNA and its damaging effects. Surprisingly, the visibly melanotic D. middendorffiana was not better shielded from DNA damage than the three non-melanotic species, and in

  4. Generic reclassification and species boundaries in the rediscovered freshwater mussel ‘Quadrula’ mitchelli (Simpson in Dall, 1896)

    USGS Publications Warehouse

    Pfeiffer, John M., III; Johnson, Nathan A.; Randklev, Charles R.; Howells, Robert G.; Williams, James D.

    2016-01-01

    The Central Texas endemic freshwater mussel, Quadrula mitchelli (Simpson in Dall, 1896), had been presumed extinct until relict populations were recently rediscovered. To help guide ongoing and future conservation efforts focused on Q. mitchelli we set out to resolve several uncertainties regarding its evolutionary history, specifically its unknown generic position and untested species boundaries. We designed a molecular matrix consisting of two loci (cytochrome c oxidase subunit I and internal transcribed spacer I) and 57 terminal taxa to test the generic position of Q. mitchelli using Bayesian inference and maximum likelihood phylogenetic reconstruction. We also employed two Bayesian species validation methods to test five a priori species models (i.e. hypotheses of species delimitation). Our study is the first to test the generic position of Q.mitchelli and we found robust support for its inclusion in the genusFusconaia. Accordingly, we introduce the binomial, Fusconaia mitchelli comb. nov., to accurately represent the systematic position of the species. We resolved F. mitchelli individuals in two well supported and divergent clades that were generally distinguished as distinct species using Bayesian species validation methods, although alternative hypotheses of species delineation were also supported. Despite strong evidence of genetic isolation within F. mitchelli, we do not advocate for species-level status of the two clades as they are allopatrically distributed and no morphological, behavioral, or ecological characters are known to distinguish them. These results are discussed in the context of the systematics, distribution, and conservation ofF. mitchelli.

  5. Rapid evolution of sessility in an endemic species flock of the freshwater bivalve Corbicula from ancient lakes on Sulawesi, Indonesia

    PubMed Central

    von Rintelen, Thomas; Glaubrecht, Matthias

    2005-01-01

    The fauna of ancient lakes frequently contains taxa with highly derived morphologies that resulted from in situ radiation of lacustrine lineages with high antiquity. We employed a molecular mtDNA phylogeny to investigate this claim for corbiculid freshwater bivalves in two ancient lake systems on the Indonesian island Sulawesi. Among the otherwise mobile corbiculid species flock, only one taxon, Posostrea anomioides, in the ancient Lake Poso exhibits a unique habit, i.e. cementing one valve to the substrate. Our data show that Corbicula on Sulawesi is polyphyletic, with the endemic riverine taxa in terminal position, and the lacustrine species flock being paraphyletic. Surprisingly, Posostrea is not confirmed as a genus distinct from Corbicula and genetic distances suggest a rather recent origin from the only other corbiculid species endemic to Lake Poso, the non-cementing Corbicula possoensis. While the cementing anomioides, despite its unique behavioural and morphological characteristics, clusters together with non-sessile Corbicula species, the latter exhibit strong genetic distances in the absence of morphological disparity and fall into several genetically rather distinct clades. These findings suggest that developmental plasticity of animals in ancient lakes rather than the antiquity of lineages might account for the unique morphology of some species. PMID:17148330

  6. Comparison of two freshwater turtle species as monitors of radionuclide and chemical contamination: DNA damage and residue analysis

    SciTech Connect

    Meyers-Schoene, L. ); Shugart, L.R.; Beauchamp, J.J.; Walton, B.T. )

    1993-08-01

    Two species of turtles that occupy different ecological niches were compared for their usefulness as monitors of freshwater ecosystems where both low-level radioactive and nonradioactive contaminants are present. The pond slider (Trachemys scripta) and common snapping turtle (Chelydra serpentina) were analyzed for the presence of [sup 90]Sr, [sup 137]Cs, [sup 60]Co, and Hg, radionuclides and chemicals known to be present at the contaminated site, and single-strand breaks in liver DNA. The integrity of the DNA was examined by the alkaline unwinding assay, a technique that detects strand breaks as a biological marker of possible exposure to genotoxic agents. This measure of DNA damage was significantly increased in both species of turtles at the contaminated site compared with turtles of the same species at a reference site, and shows that contaminant-exposed populations were under more severe genotoxic stress than those at the reference site. The level of strand breaks observed at the contaminated site was high and in the range reported for other aquatic species exposed to deleterious concentrations of genotoxic agents such as chemicals and ionizing radiation. Statistically significantly higher concentrations of radionuclides and Hg were detected in the turtles from the contaminated area. Mercury concentrations were significantly higher in the more carnivorous snapping turtle compared with the slider; however, both species were effective monitors of the contaminants.

  7. Major ion toxicity of six produced waters to three freshwater species: Application of ion toxicity models and TIE procedures

    SciTech Connect

    Tietge, J.E.; Hockett, J.R.; Evans, J.M.

    1997-10-01

    Previous research to characterize the acute toxicity of major ions to freshwater organisms resulted in the development of statistical toxicity models for three freshwater species (Ceriodaphnia dubia, Pimephales promelas, and Daphnia magna). These ion toxicity models estimate the toxicity of seven major ions utilizing logistic regression. In this study, the ion toxicity models were used in conjunction with Phase 1 toxicity identification evaluation (TIE) procedures to evaluate the contribution of major ion toxicity to the total toxicity of six produced water samples ranging in total salinity from 1.7 to 58.1 g/L. Initial toxicities of all six samples were compared to the model predictions. Four produced waters were found to have toxicity consistent with toxicity attributable to major ion concentrations only. Two produced waters were found to exhibit more toxicity than expected from ion concentrations alone. These samples were subjected to Phase 1 TIE procedures. Toxicities were reduced by specific Phase 1 TIE manipulations to those predicted by the ion toxicity models. Mock effluents were used to verify the results. The combination of the ion toxicity models with Phase 1 TIE procedures successfully quantified the toxicity due to major ions in six produced water samples.

  8. Primary structures of decapod crustacean metallothioneins with special emphasis on freshwater and semi-terrestrial species.

    PubMed Central

    Pedersen, S N; Pedersen, K L; Højrup, P; Depledge, M H; Knudsen, J

    1996-01-01

    Cadmium injections induced only a single form of metallothionein (MT) in the midgut gland of Potamon potamios, whereas the same treatment induced two isoforms in Astacus astacus. The only difference between the two latter isoforms was that one had an extra N-terminal methionine residue. MT from P. potamios showed structural differences from other decapod crustacean MTs. It contained a Gly-Thr motif at positions 8 and 8a, which had previously been found only in certain vertebrate and molluscan MTs. Furthermore P. potamios MT contained two to three times as many glutamic acid residues as normally found in decapod crustacean MT. The primary structure of MT from the freshwater crayfish A. astacus showed a high degree of sequence identity with MT from other decapod crustaceans, especially the marine astacidean Homarus americanus, although two valine residues were unexpectedly found at positions 8 and 21, where lysine residues are normally found. PMID:8921011

  9. Trait Characteristics Determine Pyrethroid Sensitivity in Nonstandard Test Species of Freshwater Macroinvertebrates: A Reality Check.

    PubMed

    Wiberg-Larsen, Peter; Graeber, Daniel; Kristensen, Esben A; Baattrup-Pedersen, Annette; Friberg, Nikolai; Rasmussen, Jes J

    2016-05-17

    We exposed 34 species of stream macroinvertebrates, representing 29 families, to a 90 min pulse of the pyrethroid λ-cyhalothrin. For 28 of these species, no pyrethroid ecotoxicity data exist. We recorded mortality rates 6 days post-exposure, and the behavioral response to pyrethroid exposure was recorded using automated video tracking. Most arthropod species showed mortality responses to the exposure concentrations (0.01-10 μg L(-1)), whereas nonarthropod species remained unaffected. LC50 varied by at least a factor of 1000 among arthropod species, even within the same family. This variation could not be predicted using ecotoxicity data from closely related species, nor using species-specific indicator values from traditional ecological quality indices. Moreover, LC50 was not significantly correlated to effect thresholds for behavioral responses. Importantly, however, the measured surface area-weight ratio and the preference for coarse substrates significantly influenced the LC50 for arthropod species, with the combination of small individuals and strong preference for coarse substrates indicating higher pyrethroid sensitivity. Our study highlights that existing pesticide ecotoxicity data should be extrapolated to untested species with caution and that actual body size (not maximum potential body size, as is usually available in traits databases) and habitat preference are central parameters determining species sensitivities to pyrethroids. PMID:27082866

  10. Phylogeny and biogeography of highly diverged freshwater fish species (Leuciscinae, Cyprinidae, Teleostei) inferred from mitochondrial genome analysis.

    PubMed

    Imoto, Junichi M; Saitoh, Kenji; Sasaki, Takeshi; Yonezawa, Takahiro; Adachi, Jun; Kartavtsev, Yuri P; Miya, Masaki; Nishida, Mutsumi; Hanzawa, Naoto

    2013-02-10

    The distribution of freshwater taxa is a good biogeographic model to study pattern and process of vicariance and dispersal. The subfamily Leuciscinae (Cyprinidae, Teleostei) consists of many species distributed widely in Eurasia and North America. Leuciscinae have been divided into two phyletic groups, leuciscin and phoxinin. The phylogenetic relationships between major clades within the subfamily are poorly understood, largely because of the overwhelming diversity of the group. The origin of the Far Eastern phoxinin is an interesting question regarding the evolutionary history of Leuciscinae. Here we present phylogenetic analysis of 31 species of Leuciscinae and outgroups based on complete mitochondrial genome sequences to clarify the phylogenetic relationships and to infer the evolutionary history of the subfamily. Phylogenetic analysis suggests that the Far Eastern phoxinin species comprised the monophyletic clades Tribolodon, Pseudaspius, Oreoleuciscus and Far Eastern Phoxinus. The Far Eastern phoxinin clade was independent of other Leuciscinae lineages and was closer to North American phoxinins than European leuciscins. All of our analysis also suggested that leuciscins and phoxinins each constituted monophyletic groups. Divergence time estimation suggested that Leuciscinae species diverged from outgroups such as Tincinae to be 83.3 million years ago (Mya) in the Late Cretaceous and leuciscin and phoxinin shared a common ancestor 70.7 Mya. Radiation of Leuciscinae lineages occurred during the Late Cretaceous to Paleocene. This period also witnessed the radiation of tetrapods. Reconstruction of ancestral areas indicates Leuciscinae species originated within Europe. Leuciscin species evolved in Europe and the ancestor of phoxinin was distributed in North America. The Far Eastern phoxinins would have dispersed from North America to Far East across the Beringia land bridge. The present study suggests important roles for the continental rearrangements during the

  11. Site History and Edaphic Features Override the Influence of Plant Species on Microbial Communities in Restored Tidal Freshwater Wetlands

    PubMed Central

    Prasse, Christine E.; Baldwin, Andrew H.

    2015-01-01

    Restored wetland soils differ significantly in physical and chemical properties from their natural counterparts even when plant community compositions are similar, but effects of restoration on microbial community composition and function are not well understood. Here, we investigate plant-microbe relationships in restored and natural tidal freshwater wetlands from two subestuaries of the Chesapeake Bay. Soil samples were collected from the root zone of Typha latifolia, Phragmites australis, Peltandra virginica, and Lythrum salicaria. Soil microbial composition was assessed using 454 pyrosequencing, and genes representing bacteria, archaea, denitrification, methanogenesis, and methane oxidation were quantified. Our analysis revealed variation in some functional gene copy numbers between plant species within sites, but intersite comparisons did not reveal consistent plant-microbe trends. We observed more microbial variations between plant species in natural wetlands, where plants have been established for a long period of time. In the largest natural wetland site, sequences putatively matching methanogens accounted for ∼17% of all sequences, and the same wetland had the highest numbers of genes coding for methane coenzyme A reductase (mcrA). Sequences putatively matching aerobic methanotrophic bacteria and anaerobic methane-oxidizing archaea (ANME) were detected in all sites, suggesting that both aerobic and anaerobic methane oxidation are possible in these systems. Our data suggest that site history and edaphic features override the influence of plant species on microbial communities in restored wetlands. PMID:25769832

  12. Early warning of freshwater salinization due to upward brine displacement by species transport simulations combined with a hydrochemical genesis model

    NASA Astrophysics Data System (ADS)

    Langer, Maria; Kühn, Michael

    2016-04-01

    Shallow groundwater resources could be possibly affected by intruding brines, which are displaced along hydraulically conductive faults as result of subsurface activities like CO2 injection. To avoid salinization of potable freshwater aquifers an early detection of intruding saline water is necessary, especially in regions where an initial geogenic salinization already exists. Our study is based on work of Tillner et al. [1] and Langer et al. [2] who investigated the influence of permeable fault systems on brine displacement for the prospective storage site Beeskow-Birkholz in the Northeast German Basin. With a 3D regional scale model considering the deep groundwater system, they demonstrated that the existence of hydraulically conductive faults is not necessarily an exclusion criterion for potential injection sites, because salinization of shallower aquifers strongly depends on the effective damage zone volume, the initial salinity distribution and overlying reservoirs [2], while permeability of fault zones does not influence salinization of shallower aquifers significantly [1]. Here we extracted a 2D cross section regarding the upper 220 m of the study area mainly represented by shallow freshwater aquifers, but also considering an initial geogenic salinization [3]. We took flow rates of the intruding brines from the previous studies [2] and implemented species transport simulations with the program code SHEMAT [4]. Results are investigated and interpreted with the hydrochemical genesis model GEBAH [5] which has been already applied as early warning of saltwater intrusions into freshwater aquifers and surface water [6]. GEBAH allows a categorization of groundwater by the ion ratios of the dissolved components and offers a first indicative determination for an existence and the intensity of saline water intrusion in shallow groundwater aquifer, independent of the concentration of the solution. With our model we investigated the migration of saline water through a

  13. Toxicokinetic toxicodynamic (TKTD) modeling of Ag toxicity in freshwater organisms: whole-body sodium loss predicts acute mortality across aquatic species.

    PubMed

    Veltman, Karin; Hendriks, A Jan; Huijbregts, Mark A J; Wannaz, Cédric; Jolliet, Olivier

    2014-12-16

    ToxicoKinetic ToxicoDynamic (TKTD) models are considered essential tools to further advance acute toxicity prediction of metals for a range of species and exposure conditions, but they are currently underutilized. We present a mechanistic TKTD model for acute toxicity prediction of silver (Ag) in freshwater organisms. In this new approach, we explicitly link relevant TKTD processes to species (physiological) characteristics, which facilitates model application to other untested freshwater organisms. The model quantifies the reduction in whole-body sodium concentration over time as a function of the target site inhibition over time, the target site density and the species-specific sodium turnover rate. Freshwater species are assumed to die instantly when they have lost a critical amount of their initial whole-body sodium concentration. Results show that mortality is significantly related to sodium loss (r(2) = 0.86) for various aquatic organisms and exposure durations. The model accurately predicts lethal effect concentrations for different freshwater organisms, including Daphnia magna, rainbow trout and juvenile crayfish, and is able to capture the observed size-specific variation of nearly 2 orders of magnitude in empirical LC50s. PMID:25420046

  14. ERPOBDELLA LAHONTANA (ANNELIDA: HIRUDINEA: ARHYNCHOBDELLIDA: ERPOBDELLIDAE), A NEW SPECIES OF FRESHWATER LEECH FROM NORTH AMERICA

    EPA Science Inventory

    New species of a leech, Erpobdella lahontana, is described from the Lahontan Basin in California and Nevada of the western United States. This species has four pairs of eyes, the preatrial loops of male paired ducts extend to ganglion XI, and the male and female gonopores are loc...

  15. Five new cryptic freshwater gastropod species from New Caledonia (Caenogastropoda, Truncatelloidea, Tateidae)

    PubMed Central

    Haase, Martin; Zielske, Susan

    2015-01-01

    Abstract During the course of a project aiming at the reconstruction of the colonization of the South Pacific islands by tateid gastropods based on molecular data we discovered five new species on New Caledonia belonging to the genera Hemistomia and Leiorhagium, respectively. We describe these species based on morphological, anatomical and genetic data. All five species are morphologically cryptic as they closely resemble or are even indistinguishable from known species stressing the importance of a comprehensive taxonomic approach integrating several methods. As a consequence of their small and fragmented geographic ranges and the rapidly progressing anthropogenic land cover changes on New Caledonia, all five species qualify as critically endangered according to the criteria of the IUCN. PMID:26478699

  16. A new species of Philometra Costa, 1845 (Nematoda: Philometridae) from the freshwater fish (red piranha) Pygocentrus nattereri Kner (Characidae) in Amazonia, Brazil.

    PubMed

    Cárdenas, Melissa Q; Moravec, František; Fernandes, Berenice M M; Morais, Aprigio Mota

    2012-10-01

    A new nematode species, Philometra nattereri n. sp. (Philometridae), is described from female specimens found in the oculo-orbits and nasal cavity of the red piranha Pygocentrus nattereri Kner (Characiformes: Characidae) from five lakes in Central Amazonia, Brazil, collected in 2008 and 2009 (overall prevalence 12%, intensity 1-3 nematodes per fish). Based on light and scanning electron microscopical examination, the new species differs from most other congeners parasitising freshwater fishes in that its oesophageal gland extends anteriorly far anterior to the level of the nerve-ring, in the presence of 14 small cephalic papillae arranged in two circles and in having two minute caudal projections. This is the first species of Philometra Costa, 1845 reported from fishes of the family Characidae and the second valid species of this genus parasitic in freshwater fishes of Brazil and South America. PMID:22983801

  17. ACCURACY ASSESSMENTS OF AIRBORNE HYSPERSPECTRAL DATA FOR MAPPING OPPORTUNISTIC PLANT SPECIES IN FRESHWATER COASTAL WETLANDS

    EPA Science Inventory

    Airbome hyperspectral data were used to detect dense patches of Phragmites australis, a native opportunist plant species, at the Pointe Mouillee coastal wetland complex (Wayne and Monroe Counties, Michigan). This study provides initial results from one of thirteen coastal wetland...

  18. Habitat fragmentation and species extirpation in freshwater ecosystems; causes of range decline of the Indus river dolphin (Platanista gangetica minor).

    PubMed

    Braulik, Gill T; Arshad, Masood; Noureen, Uzma; Northridge, Simon P

    2014-01-01

    Habitat fragmentation of freshwater ecosystems is increasing rapidly, however the understanding of extinction debt and species decline in riverine habitat fragments lags behind that in other ecosystems. The mighty rivers that drain the Himalaya - the Ganges, Brahmaputra, Indus, Mekong and Yangtze - are amongst the world's most biodiverse freshwater ecosystems. Many hundreds of dams have been constructed, are under construction, or are planned on these rivers and large hydrological changes and losses of biodiversity have occurred and are expected to continue. This study examines the causes of range decline of the Indus dolphin, which inhabits one of the world's most modified rivers, to demonstrate how we may expect other vertebrate populations to respond as planned dams and water developments come into operation. The historical range of the Indus dolphin has been fragmented into 17 river sections by diversion dams; dolphin sighting and interview surveys show that river dolphins have been extirpated from ten river sections, they persist in 6, and are of unknown status in one section. Seven potential factors influencing the temporal and spatial pattern of decline were considered in three regression model sets. Low dry-season river discharge, due to water abstraction at irrigation barrages, was the principal factor that explained the dolphin's range decline, influencing 1) the spatial pattern of persistence, 2) the temporal pattern of subpopulation extirpation, and 3) the speed of extirpation after habitat fragmentation. Dolphins were more likely to persist in the core of the former range because water diversions are concentrated near the range periphery. Habitat fragmentation and degradation of the habitat were inextricably intertwined and in combination caused the catastrophic decline of the Indus dolphin. PMID:25029270

  19. Habitat Fragmentation and Species Extirpation in Freshwater Ecosystems; Causes of Range Decline of the Indus River Dolphin (Platanista gangetica minor)

    PubMed Central

    Braulik, Gill T.; Arshad, Masood; Noureen, Uzma; Northridge, Simon P.

    2014-01-01

    Habitat fragmentation of freshwater ecosystems is increasing rapidly, however the understanding of extinction debt and species decline in riverine habitat fragments lags behind that in other ecosystems. The mighty rivers that drain the Himalaya - the Ganges, Brahmaputra, Indus, Mekong and Yangtze - are amongst the world’s most biodiverse freshwater ecosystems. Many hundreds of dams have been constructed, are under construction, or are planned on these rivers and large hydrological changes and losses of biodiversity have occurred and are expected to continue. This study examines the causes of range decline of the Indus dolphin, which inhabits one of the world’s most modified rivers, to demonstrate how we may expect other vertebrate populations to respond as planned dams and water developments come into operation. The historical range of the Indus dolphin has been fragmented into 17 river sections by diversion dams; dolphin sighting and interview surveys show that river dolphins have been extirpated from ten river sections, they persist in 6, and are of unknown status in one section. Seven potential factors influencing the temporal and spatial pattern of decline were considered in three regression model sets. Low dry-season river discharge, due to water abstraction at irrigation barrages, was the principal factor that explained the dolphin’s range decline, influencing 1) the spatial pattern of persistence, 2) the temporal pattern of subpopulation extirpation, and 3) the speed of extirpation after habitat fragmentation. Dolphins were more likely to persist in the core of the former range because water diversions are concentrated near the range periphery. Habitat fragmentation and degradation of the habitat were inextricably intertwined and in combination caused the catastrophic decline of the Indus dolphin. PMID:25029270

  20. Phytoremediation of petroleum hydrocarbons by using a freshwater fern species Azolla filiculoides Lam.

    PubMed

    Kösesakal, Taylan; Ünal, Muammer; Kulen, Oktay; Memon, Abdülrezzak; Yüksel, Bayram

    2016-01-01

    In this study, the phytoremediation capacity of Azolla filiculoides Lam. for the water resources contaminated with petroleum hydrocarbons was investigated. The plants were grown in nitrogen-free Hoagland nutrient solution containing 0.005%, 0.01%, 0.05%, 0.1%, 0.2%, 0.3%, 0.4%, and 0.5% crude oil under greenhouse conditions for 15 days. Although the growth rate of the plants were not negatively influenced by the presence of crude oil in the media for the concentration of 0.005% and 0.01% v/v, a gradual impeding effect of crude oil in the growth media has been observed at concentrations 0.05-0.1%. More than 0.1% crude oil in the growth medium ostensibly retarded the growth. For example, 0.2% oil in the media reduced growth approximately 50% relative to the control, and the presence of crude oil at concentrations 0.3% or more were lethal. The data about the percentage of plant growth, fresh weight increase and root growth clearly indicated that the tolerance level of A. filiculoides plants to crude oil ranges between 0.1% and 0.2%. In comparison to control samples, the biodegradation rate of total aliphatic and aromatic (phenathrene) hydrocarbons at 0.05-0.2% oil concentrations, was 94-73% and 81-77%, respectively. On the other hand, in case of further increases in oil concentration in media, i.e.; 0.3-0.5%, the biodegradation rate was still higher in the experimental samples, respectively 71-63% and 75-71%. The high biodegradation rates of petroleum hydrocarbons in the experimental samples suggested that A. filiculoides plants could be a promising candidate to be used for the phytoremediation of low crude oil contaminated precious freshwater resources. PMID:26588199

  1. Local nutrient regimes determine site-specific environmental triggers of cyanobacterial and microcystin variability in urban lakes

    NASA Astrophysics Data System (ADS)

    Sinang, S. C.; Reichwaldt, E. S.; Ghadouani, A.

    2014-10-01

    Toxic cyanobacterial blooms in urban lakes present serious health hazards to humans and animals and require effective management strategies. In the management of toxic cyanobacteria blooms, understanding the roles of environmental factors is crucial. To date, a range of environmental factors have been proposed as potential triggers for the spatiotemporal variability of cyanobacterial biomass and microcystins in freshwater systems. However, the environmental triggers of cyanobacteria and microcystin variability remain a subject of debate due to contrasting findings. This issue has raised the question if the environmental triggers are site-specific and unique between water bodies. In this study, we investigated the site-specificity of environmental triggers for cyanobacterial bloom and cyanotoxins dynamics. Our study suggests that cyanobacterial dominance and cyanobacterial microcystin content variability were significantly correlated to phosphorus and iron concentrations. However, the correlations between phosphorus and iron with cyanobacterial biomass and microcystin variability were not consistent between lakes, thus suggesting a site specificity of these environmental factors. The discrepancies in the correlations could be explained by differences in local nutrient concentration and the cyanobacterial community in the systems. The findings of this study suggest that identification of site-specific environmental factors under unique local conditions is an important strategy to enhance positive outcomes in cyanobacterial bloom control measures.

  2. Chromosome numbers in three species groups of freshwater flatworms increase with increasing latitude.

    PubMed

    Lorch, Sven; Zeuss, Dirk; Brandl, Roland; Brändle, Martin

    2016-03-01

    Polyploidy in combination with parthenogenesis offers advantages for plasticity and the evolution of a broad ecological tolerance of species. Therefore, a positive correlation between the level of ploidy and increasing latitude as a surrogate for environmental harshness has been suggested. Such a positive correlation is well documented for plants, but examples for animals are still rare. Species of flatworms (Platyhelminthes) are widely distributed, show a remarkably wide range of chromosome numbers, and offer therefore good model systems to study the geographical distribution of chromosome numbers. We analyzed published data on counts of chromosome numbers and geographical information of three flatworm "species" (Phagocata vitta, Polycelis felina and Crenobia alpina) sampled across Europe (220 populations). We used the mean chromosome number across individuals of a population as a proxy for the level of ploidy within populations, and we tested for relationships of this variable with latitude, mode of reproduction (sexual, asexual or both) and environmental variables (annual mean temperature, mean diurnal temperature range, mean precipitation and net primary production). The mean chromosome numbers of all three species increased with latitude and decreased with mean annual temperature. For two species, chromosome number also decreased with mean precipitation and net primary production. Furthermore, high chromosome numbers within species were accompanied with a loss of sexual reproduction. The variation of chromosome numbers within individuals of two of the three species increased with latitude. Our results support the hypothesis that polyploid lineages are able to cope with harsh climatic conditions at high latitudes. Furthermore, we propose that asexual reproduction in populations with high levels of polyploidization stabilizes hybridization events. Chromosomal irregularities within individuals tend to become more frequent at the extreme environments of high

  3. Effects of cadmium and resource quality on freshwater detritus processing chains: a microcosm approach with two insect species.

    PubMed

    Campos, Diana; Alves, Artur; Lemos, Marco F L; Correia, António; Soares, Amadeu M V M; Pestana, João L T

    2014-07-01

    Detritus processing is vital for freshwater ecosystems that depend on the leaf litter from riparian vegetation and is mediated by microorganisms and aquatic invertebrates. Shredder invertebrates transform coarse particulate organic matter into fine particulate organic matter used as food by collector species. Direct and indirect effects of contaminants can impair detritus processing and thus affect the functioning of these ecosystems. Here, we assessed the combined effects of a toxic metal (cadmium) and resource quality (leaf species) on detritus processing and shredder-collector interactions. We considered two types of leaves, alder and eucalyptus that were microbially conditioned under different Cd concentrations in the laboratory. The microbial communities present on leaves were analyzed by Denaturing Gradient Gel Electrophoresis (DGGE), and we also measured microbial respiration rates. Sericostoma vittatum (a caddisfly shredder) and Chironomus riparius (a midge collector) were also exposed to Cd and allowed to consume the corresponding alder or eucalyptus leaves. We evaluated C. riparius growth and leaf mass loss in multispecies microcosms. Cadmium exposure affected leaf conditioning and fungal diversity on both leaf species, as assessed by DGGE. Cadmium exposure also affected the mass loss of alder leaves by reductions in detritivore feeding, and impaired C. riparius growth. Chironomus riparius consumed alder leaf discs in the absence of shredders, but S. vittatum appear to promote C. riparius growth in treatments containing eucalyptus. These results show that indirect effects of contaminants along detritus-processing chains can occur through effects on shredder-collector interactions such as facilitation but they also depend on the nutritional quality of detritus and on sensitivity and feeding plasticity of detritivore species. PMID:24648031

  4. Haemogregarine infections of three species of aquatic freshwater turtles from two sites in Costa Rica.

    PubMed

    Rossow, John A; Hernandez, Sonia M; Sumner, Scarlett M; Altman, Bridget R; Crider, Caroline G; Gammage, Mallory B; Segal, Kristy M; Yabsley, Michael J

    2013-12-01

    Twenty-five black river turtles (Rhinoclemmys funerea) and eight white-lipped mud turtles (Kinosternon leucostomum) from Selva Verde, Costa Rica were examined for haemoparasites. Leeches identified as Placobdella multilineata were detected on individuals from both species. All turtles sampled were positive for intraerythrocytic haemogregarines (Apicomplexa:Adeleorina) and the average parasitemia of black river turtles (0.34% ± 0.07) was significantly higher compared to white-lipped mud turtles (0.05% ± 0.006). No correlation was found between parasitemia and relative body mass of either species or between black river turtles from the two habitats. In addition, one scorpion mud turtle (Kinosternon scorpioides) examined from La Pacifica, Costa Rica, was positive for haemogregarines (0.01% parasitemia). Interestingly, parasites of the scorpion mud turtle were significantly smaller than those from the other two species and did not displace the erythrocyte nucleus, whereas parasites from the other two species consistently displaced host cell nuclei and often distorted size and shape of erythrocytes. This is the first report of haemogregarines in turtles from Central America and of haemogregarines in K. leucostomum, K. scorpioides, and any Rhinoclemmys species. Additional studies are needed to better characterise and understand the ecology of these parasites. PMID:24533326

  5. Host tropism of infectious salmon anaemia virus in marine and freshwater fish species.

    PubMed

    Aamelfot, M; Dale, O B; McBeath, A; Falk, K

    2015-08-01

    The aquatic orthomyxovirus infectious salmon anaemia virus (ISAV) causes a severe disease in farmed Atlantic salmon, Salmo salar L. Although some ISA outbreaks are caused by horizontal transmission of virus between farms, the source and reservoir of the virus is largely unknown and a wild host has been hypothesized. Atlantic salmon are farmed in open net-pens, allowing transmission of pathogens from wild fish and the surrounding environment to the farmed fish. In this study, a large number of fish species were investigated for ISAV host potential. For orthomyxoviruses, a specific receptor binding is the first requirement for infection; thus, the fish species were investigated for the presence of the ISAV receptor. The receptor was found to be widely distributed across the fish species. All salmonids expressed the receptor. However, only some of the cod-like and perch-like fish did, and all flat fish were negative. In the majority of the positive species, the receptor was found on endothelial cells and/or on red blood cells. The study forms a basis for further investigations and opens up the possibility for screening species to determine whether a wild host of ISAV exists. PMID:25048819

  6. METAL TOXICITY TO EMBRYOS AND LARVAE OF EIGHT SPECIES OF FRESHWATER FISH--II: COPPER

    EPA Science Inventory

    Fish larvae and early juveniles of all species tested (brook trout, rainbow trout, brown trout, lake trout, northern pike, white sucker, herring and smallmouth bass) were more sensitive to copper than the embryos. Embryo survival was affected only at the higher concentrations tes...

  7. Survey of parasitic fauna of different ornamental freshwater fish species in Iran.

    PubMed

    Adel, Milad; Ghasempour, Fatemeh; Azizi, Hamid Reza; Shateri, Mohamad Hadi; Safian, Ahmad Reza

    2015-01-01

    Parasitic diseases are harmful and limiting factors in breeding and rearing ornamental fish industry. In this study, 400 apparently healthy ornamental fishes from five species (each species 80 specimens) including: Goldfish (Carassius auratus), guppy (Poecilia reticulate), angelfish (Pterophyllum scalare), discus (Symphsodon discus) and sailfin mollies (Poecilia latipinna) was obtained from a local ornamental fish farm in the north of Iran during 2011 to 2012. The primary purpose of this study was to determine the parasitic infections of aquarium fish in Iran. For this purpose, fish were first examined for ectoparasites using wet mount under a light microscope. Then, the alimentary ducts of fish were observed under light and stereo microscope. In survey of different infection rates for different parasitic infections in examining fish: Dactylogyrus sp., Gyrodactylus sp., Ichthyophthirius multifiliis Trichodina reticulata, Capillaria sp. and Lernaea cyprinacea were collected from five species. All five fish species had Monogenea (Gyrodactylidae and Dactylogyridae) in their skins and gills, the highest prevalence was observed in C. auratus and the lowest was in P. scalare and S. discus. Also, Capillaria sp. was reported as a first record from the abdominal cavity of P. scalare in Iran. Our findings revealed that the protozoal infections are very common among aquarium fishes. Although, no gross pathology was observed among infected fishes, but it is likely that in case of any changes in the environment, then parasitic infections could be harmful. PMID:25992255

  8. FRESHWATER SEDIMENT TOXICITY BIOASSESSMENT: RATIONALE FOR SPECIES SELECTION AND TEST DESIGN

    EPA Science Inventory

    The rationale and conceptual basis for the use of sediment toxicity assays are discussed in relationship to their use in sediment evaluations employing faunal surveys, toxicity assays, and chemical analyses. he disadvantages and advantages of various species from the major classe...

  9. Comparison of cyanobacterial microcystin synthetase (mcy) E gene transcript levels, mcy E gene copies, and biomass as indicators of microcystin risk under laboratory and field conditions

    PubMed Central

    Ngwa, Felexce F; Madramootoo, Chandra A; Jabaji, Suha

    2014-01-01

    Increased incidences of mixed assemblages of microcystin-producing and nonproducing cyanobacterial strains in freshwater bodies necessitate development of reliable proxies for cyanotoxin risk assessment. Detection of microcystin biosynthetic genes in water blooms of cyanobacteria is generally indicative of the presence of potentially toxic cyanobacterial strains. Although much effort has been devoted toward elucidating the microcystin biosynthesis mechanisms in many cyanobacteria genera, little is known about the impacts of co-occurring cyanobacteria on cellular growth, mcy gene expression, or mcy gene copy distribution. The present study utilized conventional microscopy, qPCR assays, and enzyme-linked immunosorbent assay to study how competition between microcystin-producing Microcystis aeruginosa CPCC 299 and Planktothrix agardhii NIVA-CYA 126 impacts mcyE gene expression, mcyE gene copies, and microcystin concentration under controlled laboratory conditions. Furthermore, analyses of environmental water samples from the Missisquoi Bay, Quebec, enabled us to determine how the various potential toxigenic cyanobacterial biomass proxies correlated with cellular microcystin concentrations in a freshwater lake. Results from our laboratory study indicated significant downregulation of mcyE gene expression in mixed cultures of M. aeruginosa plus P. agardhii on most sampling days in agreement with depressed growth recorded in the mixed cultures, suggesting that interaction between the two species probably resulted in suppressed growth and mcyE gene expression in the mixed cultures. Furthermore, although mcyE gene copies and McyE transcripts were detected in all laboratory and field samples with measureable microcystin levels, only mcyE gene copies showed significant positive correlations (R2 > 0.7) with microcystin concentrations, while McyE transcript levels did not. These results suggest that mcyE gene copies are better indicators of potential risks from microcystins

  10. Variable survival across low pH gradients in freshwater fish species.

    PubMed

    Jellyman, P G; Harding, J S

    2014-11-01

    A series of 14 day experiments was conducted on five common New Zealand fish species (redfin bully Gobiomorphus huttoni, inanga Galaxias maculatus, brown trout Salmo trutta, longfin eel Anguilla dieffenbachii and koaro Galaxias brevipinnis) to assess the effect of pH on survival and changes in body mass. No species survived in water of pH <4 although there was 100% survival of all adults at pH 4.5, G. maculatus larvae were also tested and had high mortality at this pH. Results suggest that adults are tolerant of low-pH waters; however, successful remediation of anthropogenically acidified streams will require an understanding of the susceptibility to low pH on different life cycle stages. PMID:25230112

  11. Differential effects of P25 TiO2 nanoparticles on freshwater green microalgae: Chlorella and Scenedesmus species.

    PubMed

    Roy, Rajdeep; Parashar, Abhinav; Bhuvaneshwari, M; Chandrasekaran, N; Mukherjee, Amitava

    2016-07-01

    P25 TiO2 nanoparticles majorly used in cosmetic products have well known detrimental effects towards the aquatic environment. In a freshwater ecosystem, Chlorella and Scenedesmus are among the most commonly found algal species frequently used to study the effects of metal oxide nanoparticles. A comparative study has been conducted herein to investigate differences in the toxic effects caused by these nanoparticles towards the two algae species. The three different concentrations of P25 TiO2 NPs (0.01, 0.1 & 1μg/mL, i.e., 0.12, 1.25 and 12.52μM) were selected to correlate surface water concentrations of the nanoparticles, and filtered and sterilized fresh water medium was used throughout this study. There was significant increase (p<0.001) in hydrodynamic diameter of nanoparticles with respect to both, time (0, 24, 48 and 72h) as well as concentration under all the exposure conditions. Although, significant dose-dependent morphological (surface area & biovolume) interspecies variations were not observed, it was evident at the highest concentration of exposure within individuals. At 1μg/mL exposure concentration, a significant difference in toxicity was noted between Chlorella and Scenedesmus under only visible light (p<0.001) and UVA (p<0.01) irradiation conditions. The viability data were well supported by the results obtained for oxidative stress induced by NPs on the cells. At the highest exposure concentration, superoxide dismutase and reduced glutathione activities were assessed for both the algae under all the irradiation conditions. Increased catalase activity and LPO release complemented the cytotoxic effects observed. Significant interspecies variations were noted for these parameters under UVA and visible light exposed cells of Chlorella and Scenedesmus species, which could easily be correlated with the uptake of the NPs. PMID:27137676

  12. Effect of temperature on photosynthesis-light response and growth of four phytoplankton species isolated from a tidal freshwater river

    USGS Publications Warehouse

    Coles, J.F.; Jones, R.C.

    2000-01-01

    Three cyanobacteria (Microcystis aeruginosa Kutz. emend. Elenkin, Merismopedia tenuissima Lemmermann, and Oscillatoria sp.) and one diatom (Aulacoseira granulata var. angustissima O. Mull. emend. Simonsen) were isolated from the tidal freshwater Potomac River and maintained at 23??C and 40 ??mol photons??m-2??s-1 on a 16:8 L:D cycle in unialgal culture. Photosynthetic parameters were determined in nutrient-replete cultures growing exponentially at 15, 20, 25, and 30??C by incubation with 14C at six light levels. P(B)(max) was strongly correlated with temperature over the entire range for the cyanobacteria and from 15 to 25??C for Aulacoseira, with Q10 ranging from 1.79 to 2.67. The ?? values demonstrated a less consistent temperature pattern. Photosynthetic parameters indicated an advantage for cyanobacteria at warmer temperatures and in light-limited water columns. P(B)(max) and I(k) values were generally lower than comparable literature and field values, whereas ?? was generally higher, consistent with a somewhat shade acclimated status of our cultures. Specific growth rate (??), as measured by chlorophyll change, was strongly influenced by temperature in all species. Oscillatoria had the highest ?? at all temperatures, joined at lower temperatures by Aulacoseira and at higher temperatures by Microcystis. Values of ?? for Aulacaseira were near the low end of the literature range for diatoms consistent with the light-limited status of the cultures. The cyanobacteria exhibited growth rates similar to those reported in other studies. Q10 for growth ranged from 1.71 for Aulacoseira to 4.16 for Microcystis. Growth rate was highly correlated with P(B)(max) for each species and the regression slope coefficients were very similar for three of the species.

  13. Comparing Band Ratio, Semi-Empirical, and Modified Gaussian Models in Predicting Cyanobacterial Pigments in Eutrophic Inland Waters

    NASA Astrophysics Data System (ADS)

    Robertson, A. L.; Lin, L.; Tedesco, L.; Wilson, J.; Soyeux, E.

    2008-12-01

    Cyanobacteria are known to produce toxins harmful to humans and compounds that alter the taste/odor of water. Monitoring cyanobacteria is of interest to surface water managers because eutrophication of these surface water bodies are common thus increasing the chances of cyanobacterial blooms. Traditionally cyanobacteria are remotely sensed using the spectral properties of the two pigments: chlorophyll a (Chl-a), indicative of all algal and cyanobacteria species, and phycocyanin (PC), specific to cyanobacteria in most freshwater systems. Initial algorithms identifying cyanobacterial pigments used ratios of reflectance at specific wavelengths. In an effort to increase transferability between different systems researchers have included optical properties of water and water constituents to build semi-empirical models. Recently researchers have applied a curve-fitting, modified Gaussian model (MGM), to predict these cyanobacterial pigments. To determine the best performing algorithm this study compares the performance of 4 band ratio, 4 semi-empirical, and 2 modified Gaussian models in predicting PC and Chl-a on three central Indiana reservoirs (Eagle Creek, Geist, Morse). For each of these reservoirs, spectral data were collected with three different sensors (boat-based: ASD Fieldspec, Ocean Optics USB4000; Ariel: AISA Eagle) over a three year period (2005-2007), and water samples concomitant with these spectra were analyzed for concentration of the two pigments and other water constituents. Comparison shows that a model using the MGM strength at 620 nm from a 2005 Morse Reservoir ASD Fieldspec data set shows that the MGM has the best transferability to a 2006 Morse Reservoir ASD Fieldspec data set in predicting phycocyanin (R2 = 0.77; RMSE= 52.45 ppb), and a band ratio model published by Mittenzwey et al. 1991 has the best transferability in predicting chlorophyll a (R2 = 0.74; RMSE 16.31=ppb).

  14. Toxicity and recovery in the pregnant mouse after gestational exposure to the cyanobacterial toxin, cylindrospermopsin.

    EPA Science Inventory

    Cylindrospermopsin (CYN) is a tricyclic alkaloid toxin produced by fresh water cyanobacterial species worldwide. CYN has been responsible for both livestock and human poisoning after oral exposure. This study investigated the toxicity of CYN to pregnant mice exposed during differ...

  15. Interactions of gold nanoparticles with freshwater aquatic macrophytes are size and species dependent.

    PubMed

    Glenn, J Brad; White, Sarah A; Klaine, Stephen J

    2012-01-01

    The partitioning of 4- and 18-nm gold nanoparticles (AuNPs) to aquatic macrophytes was investigated in vivo with exposure suspension in well water. Three morphologically distinct aquatic macrophytes were studied. Myriophyllum simulans Orch. and Egeria densa Planch. are submerged aquatic vascular plants, whereas Azolla caroliniana Willd. is a free-floating aquatic fern. Because aquatic plants absorb the majority of their nutrients from the water column, it is logical to hypothesize that they may absorb nanomaterials in suspension, potentially facilitating trophic transfer. Each plant was exposed to two different-sized gold nanospheres at a nominal concentration of 250 µg/L AuNPs for 24 h. Macrophytes were harvested at six time points (1, 3, 6, 12, 18, and 24 h), dried, and then analyzed for gold concentration via inductively coupled plasma-mass spectrometry. Concentrations were normalized to whole-plant dry tissue mass. The present study shows that absorption of AuNPs through root uptake was size and species dependent. Electron microscopy revealed that 4- and 18-nm AuNPs adsorbed to the roots of each species. Root tissue was sectioned, and transmission electron microscopy indicated that 4-nm and 18-nm AuNPs were absorbed by A. caroliniana, whereas only 4-nm AuNPs were absorbed by M. simulans. Egeria densa did not absorb AuNPs of either size. Gold nanoparticles were confirmed in tissue by using energy-dispersive X-ray spectroscopy. Absorption of AuNPs by plants may be a function of the salinity tolerance of each species. PMID:22038861

  16. Adverse effects and bioconcentration of chromium in two freshwater rotifer species.

    PubMed

    Hernández-Ruiz, Esmeralda; Alvarado-Flores, Jesús; Rubio-Franchini, Isidoro; Ventura-Juárez, Javier; Rico-Martínez, Roberto

    2016-09-01

    Bioaccumulation of trivalent (CrIII) and hexavalent chromium (CrVI), and its adverse effects were studied in two rotifer species: Brachionus calyciflorus (two different strains), and Lecane quadridentata. Median Lethal Concentration (LC50) at 24 h of both species showed that CrVI is highly toxic: LC50 ranges from 4.7 × 10(-5) to 4 × 10(-6) mg L(-1)), compared with CrIII: LC50 ranges from 0.64 to 1.279 mg L(-1). Using the LC50 as an exposure concentration, and using atomic absorption, the bioconcentration factor (BCF) was obtained and BCFs of rotifers exposed to CrIII are four orders of magnitude lower than BCFs of rotifers exposed to CrVI. The effect of Cr on the elemental composition of the two species of rotifers in their structures by X-ray microanalysis by energy dispersion showed that Cr is found in intoxicated rotifers, but not in control rotifers. The basal immunoreactivity to metallothioneins is greater in B. calyciflorus than L. quadridentata. The immunoreactivity to metallothioneins decreases in B. calyciflorus when is exposed to CrIII, in contrast in L. quadridentata the immunoreactivity to metallothioneins increase when is exposed to CrIII, and the immunoreactivity to CrVI in L. quadridentata decrease. A mechanism is proposed in which the harder lorica of L. quadridentata acts as a barrier and accumulator of CrVI, and allows for attenuating responses like metallothionein production in L. quadridentata. Instead, in B. calyciflorus the lack of a harder lorica allows for deeper penetration of CrVI, and no time to produce attenuating measures. PMID:27258901

  17. Levels, Distribution, and Health Risks of Polycyclic Aromatic Hydrocarbons in Four Freshwater Edible Fish Species from the Beijing Market

    PubMed Central

    Wu, Wen-Jing; Qin, Ning; He, Wei; He, Qi-Shuang; Ouyang, Hui-Ling; Xu, Fu-Liu

    2012-01-01

    We first estimated the content of polycyclic aromatic hydrocarbons (PAHs) in the brain, liver, bladder, roe, and muscle of four species of edible freshwater fish from the Beijing market. The distribution characteristics of PAHs in these tissues and organs were analyzed to determine their health risks to humans. The results showed that the residual levels of wet weight and lipid-normalized weight ∑PAHs in various tissues of these fish ranged from 0.51 ng·g−1 to 28.78 ng·g−1 and from 93.62 ng·g−1 to 8203.43 ng·g−1, respectively. The wet weight contents of ∑PAHs were relatively higher in the brain and lower in the liver and muscle. But the differences were not significant. And the differences of lipid-normalized weight PAHs were significant, which in the bighead carp were found significantly the highest, followed in crucian carp, and the lowest in grass carp and carp. The contents of ∑PAHs were the highest in the liver and the lowest in the brain. In the tissues with a higher lipid content, higher residual levels of PAHs were found. The carcinogenic risks for humans from residual ∑PAHs in the various fish tissues were far below 10−5. PMID:23365511

  18. Effects of lead on growth, photosynthetic characteristics and production of reactive oxygen species of two freshwater green algae.

    PubMed

    Dao, Ly H T; Beardall, John

    2016-03-01

    In the natural environment, heavy metal contamination can occur as long-term pollution of sites or as pulses of pollutants from wastewater disposal. In this study two freshwater green algae, Chlorella sp. FleB1 and Scenedesmus YaA6, were isolated from lead-polluted water samples and the effects of 24 h vs 4 and 8 d exposure of cultures to lead on growth, photosynthetic physiology and production of reactive oxygen species (ROS) of these algae were investigated. In Chlorella sp. FleB1, there was agreement between lead impacts on chlorophyll content, photosynthesis and growth in most case. However, in Scenedesmus acutus YaA6 growth was inhibited at lower lead concentrations (0.03-0.87 × 10(-9) M), under which ROS, measured by 2',7' dichlorodihydrofluorescein diacetate fluorescence, were 4.5 fold higher than in controls but photosynthesis was not affected, implying that ROS had played a role in the growth inhibition that did not involve direct effects on photosynthesis. Effects of short-term (5 h, 24 h) vs long-term (4 d and 8 d) exposure to lead were also compared between the two algae. The results contribute to our understanding of the mechanisms of lead toxicity to algae. PMID:26774308

  19. Toxic effects induced by salt stress on selected freshwater prokaryotic and eukaryotic microalgal species.

    PubMed

    Bartolomé, M C; D'ors, A; Sánchez-Fortún, S

    2009-02-01

    In order to determine the short-term impact induced by salt stress, cultures of Dictyosphaerium chlorelloides and Microcystis aeruginosa were grown in presence of increasing sea-salt concentrations. Growth rate and photosystem II activity in D. chlorelloides, and photosynthetic oxygen production (in both species) were analyzed. A concentration-dependent response was obtained with the presence of sea-salt in culture medium, being M. aeruginosa (EC(50(72)) = 76.6 mM) more sensitive to salt stress than D. chlorelloides (EC(50(72)) = 340.7 mM). However, comparative analysis between growth and Phi(PSII) inhibition in D. chlorelloides shown that there are not significant differences among EC(50(72)) values obtained. An immediate toxic response, induced by increase of sea-salt concentration, has been obtained applying the calculated EC(50(72)) values in both species. These results shown that sea-salt acts as a sensitive and rapid toxic compound in algal cells, and that the sensitivity of M. aeruginosa to salinity stress is much higher than that of D. chlorelloides. PMID:18855137

  20. Lack of surface-associated microorganisms in a mixed species community of freshwater Unionidae

    USGS Publications Warehouse

    Nichols, S. Jerrine; Allen, J.; Walker, G.; Yokoyama, M.; Garling, D.

    2001-01-01

    To determine whether unionids contain surface-attached endosymbiotic bacteria, ciliates, or fungi, we used scanning electron microscopy to examine the epithelial surface of various organs within the digestive systems and mantle cavity of temperate river and lake unionids on a seasonal basis. We also cultured material removed from the lumen of these same organs and from the mantle cavity to detect cellobiose-, cellulose-, and chitin- degrading microbes. No true endosymbiotic fauna were observed attached to the surface of the digestive or mantle tissues of any species of unionid. Microbial growth on cellulose or chitin bacteriological media varied by season and habitat, but not by unionid species or source of the isolate. Lake unionids did not contain microbes capable of digesting cellulose or chitin, whereas unionids from the river site did in March and August, but not in December. Since these cultured cellulose- and chitin-degrading bacteria were never found attached to any unionid tissues, they appeared to be transient forms, not true endosymbionts. Microbes capable of digesting cellobiose were found in every unionid collected in all seasons and habitats, but again, no microbes were directly observed attached to unionid tissues. If unionids, like most other vertebrates, lack digestive enzymes required to initiate primary bond breakage, then the lack of cellulolytic and chitinolytic endosymbionts would affect the ability to utilize cellulose or chitin foods. Thus, in captivity dry feeds based on corn, soybeans, or nauplii should be pre-digested to ensure maximum absorption of nutrients by unionids. The lack of celluloytic or chitinolytic endosymbionts should not affect relocation success, though the seasonal role of transient microbes in unionid nutrition requires further investigation.

  1. Ecophysiological Evidence that Achromatium oxaliferum Is Responsible for the Oxidation of Reduced Sulfur Species to Sulfate in a Freshwater Sediment

    PubMed Central

    Gray, N. D.; Pickup, R. W.; Jones, J. G.; Head, I. M.

    1997-01-01

    Achromatium oxaliferum is a large, morphologically conspicuous, sediment-dwelling bacterium. The organism has yet to be cultured in the laboratory, and very little is known about its physiology. The presence of intracellular inclusions of calcite and sulfur have given rise to speculation that the bacterium is involved in the carbon and sulfur cycles in the sediments where it is found. Depth profiles of oxygen concentration and A. oxaliferum cell numbers in a freshwater sediment revealed that the A. oxaliferum population spanned the oxic-anoxic boundary in the top 3 to 4 cm of sediments. Some of the A. oxaliferum cells resided at depths where no oxygen was detectable, suggesting that these cells may be capable of anaerobic metabolism. The distributions of solid-phase and dissolved inorganic sulfur species in the sediment revealed that A. oxaliferum was most abundant where sulfur cycling was most intense. The sediment was characterized by low concentrations of free sulfide. However, a comparison of sulfate reduction rates in sediment cores incubated with either oxic or anoxic overlying water indicated that the oxidative and reductive components of the sulfur cycle were tightly coupled in the A. oxaliferum-bearing sediment. A positive correlation between pore water sulfate concentration and A. oxaliferum numbers was observed in field data collected over an 18-month period, suggesting a possible link between A. oxaliferum numbers and the oxidation of reduced sulfur species to sulfate. The field data were supported by laboratory incubation experiments in which sodium molybdate-treated sediment cores were augmented with highly purified suspensions of A. oxaliferum cells. Under oxic conditions, rates of sulfate production in the presence of sodium molybdate were found to correlate strongly with the number of cells added to sediment cores, providing further evidence for a role for A. oxaliferum in the oxidation of reduced sulfur. PMID:16535604

  2. Distinct migratory and non-migratory ecotypes of an endemic New Zealand eleotrid (Gobiomorphus cotidianus) – implications for incipient speciation in island freshwater fish species

    PubMed Central

    2008-01-01

    Background Many postglacial lakes contain fish species with distinct ecomorphs. Similar evolutionary scenarios might be acting on evolutionarily young fish communities in lakes of remote islands. One process that drives diversification in island freshwater fish species is the colonization of depauperate freshwater environments by diadromous (migratory) taxa, which secondarily lose their migratory behaviour. The loss of migration limits dispersal and gene flow between distant populations, and, therefore, is expected to facilitate local morphological and genetic differentiation. To date, most studies have focused on interspecific relationships among migratory species and their non-migratory sister taxa. We hypothesize that the loss of migration facilitates intraspecific morphological, behavioural, and genetic differentiation between migratory and non-migratory populations of facultatively diadromous taxa, and, hence, incipient speciation of island freshwater fish species. Results Microchemical analyses of otolith isotopes (88Sr, 137Ba and 43Ca) differentiated migratory and non-migratory stocks of the New Zealand endemic Gobiomorphus cotidianus McDowall (Eleotridae). Samples were taken from two rivers, one lake and two geographically-separated outgroup locations. Meristic analyses of oculoscapular lateral line canals documented a gradual reduction of these structures in the non-migratory populations. Amplified fragment length polymorphism (AFLP) fingerprints revealed considerable genetic isolation between migratory and non-migratory populations. Temporal differences in reproductive timing (migratory = winter spawners, non-migratory = summer spawners; as inferred from gonadosomatic indices) provide a prezygotic reproductive isolation mechanism between the two ecotypes. Conclusion This study provides a holistic look at the role of diadromy in incipient speciation of island freshwater fish species. All four analytical approaches (otolith microchemistry, morphology

  3. Conversion of carotenoids into vitamins A(1) and A(2) in two species of freshwater fish.

    PubMed

    Gross, J; Budowski, P

    1966-12-01

    1. Examination of two zooplankton species predominating in fish ponds, Daphnia magna and Chironomus larvae, revealed the presence of alpha- and beta-carotene, echinenone, canthaxanthin and 3-hydroxy-4-oxo-beta-carotene in Daphnia, and beta-carotene and cryptoxanthin ester in Chironomus. No specific provitamins A(2) (containing a 3,4-dehydro-beta-ionone ring) were detected. 2. Guppies (Lebistes reticulatus) and platies (Xiphophorus variatus) were found to form vitamin A from beta-carotene and from its oxygen-containing derivatives isozeaxanthin, canthaxanthin and astaxanthin. Slight conversion into vitamin A(2) seemed to occur simultaneously. 3,4-Dehydro-3'-hydroxy-beta-carotene formed little vitamin A, and the latter was mainly of the A(2) type. Lutein was devoid of provitamin A properties. 3. In addition to vitamin A, beta-carotene was detected in fish receiving the 4-oxo- and 4-hydroxy-carotenoids. A reaction scheme for the conversion of carotenoids into retinal and and 3,4-dehydroretinal is presented. 4. It is concluded that natural 4-oxo derivatives of beta-carotene may play a significant role as vitamin A precursors for fish. PMID:16742455

  4. Conversion of carotenoids into vitamins A1 and A2 in two species of freshwater fish

    PubMed Central

    Gross, Jeana; Budowski, P.

    1966-01-01

    1. Examination of two zooplankton species predominating in fish ponds, Daphnia magna and Chironomus larvae, revealed the presence of α- and β-carotene, echinenone, canthaxanthin and 3-hydroxy-4-oxo-β-carotene in Daphnia, and β-carotene and cryptoxanthin ester in Chironomus. No specific provitamins A2 (containing a 3,4-dehydro-β-ionone ring) were detected. 2. Guppies (Lebistes reticulatus) and platies (Xiphophorus variatus) were found to form vitamin A from β-carotene and from its oxygen-containing derivatives isozeaxanthin, canthaxanthin and astaxanthin. Slight conversion into vitamin A2 seemed to occur simultaneously. 3,4-Dehydro-3′-hydroxy-β-carotene formed little vitamin A, and the latter was mainly of the A2 type. Lutein was devoid of provitamin A properties. 3. In addition to vitamin A, β-carotene was detected in fish receiving the 4-oxo- and 4-hydroxy-carotenoids. A reaction scheme for the conversion of carotenoids into retinal and and 3,4-dehydroretinal is presented. 4. It is concluded that natural 4-oxo derivatives of β-carotene may play a significant role as vitamin A precursors for fish. PMID:16742455

  5. THE COMPLEX EXTRACELLULAR POLYSACCHARIDES OF MAINLY CHAIN-FORMING FRESHWATER DIATOM SPECIES FROM EPILITHIC BIOFILMS(1).

    PubMed

    Bahulikar, Rahul A; Kroth, Peter G

    2008-12-01

    Diatoms are dominant organisms in phototrophic biofilms in aquatic habitats. They produce copious amounts of extracellular polymeric substances (EPS), which mainly consist of carbohydrates and traces of proteins and glycoproteins. This study focuses on the characterization of EPS from a total of 14 diatoms belonging to the six genera Achnanthes, Cymbella, Fragilaria, Punctastriata, Staurosira, and Pseudostaurosira, all of which were isolated from epilithic biofilms of the littoral zone of Lake Constance. EPS from all isolates were extracted by a sequential extraction procedure resulting in five different fractions. The monosaccharide composition of each fraction was analyzed by HPLC equipped with a pulse amperiometric detector, yielding results similar to those obtained by probing the EPS structures with monomer-specific fluorophore-linked lectins. Significant differences in carbohydrate composition occurred in the different fractions of single isolates. Most of the diatom isolates in our study form chain-like colonies in which the cells are attached to each other by intercellular pads. Here we demonstrate that these pads can be dissolved in hot bicarbonate and that they show a heterogeneous composition of monosaccharides in contrast to other fractions, which mostly were dominated by one or two monosaccharides. Principal component analysis indicates a correlation between carbohydrate composition of EPS fractions and the phylogenetic relationship of the respective species, indicating that EPS analyses under defined culture conditions may support taxonomic analyses. PMID:27039861

  6. Capture, adaptation and artificial control of reproduction of Lophiosilurus alexandri: A carnivorous freshwater species.

    PubMed

    Costa, Deliane Cristina; de Souza e Silva, Walisson; Melillo Filho, Reinaldo; Miranda Filho, Kleber Campos; Epaminondas dos Santos, José Claudio; Kennedy Luz, Ronald

    2015-08-01

    The present study describes the capture adaptation and reproduction of wild Lophiosilurus alexandri broodstock in laboratory conditions. There were two periods when capturing was performed in natural habitats. The animals were placed in four tanks of 5m(3) with water temperatures at 28°C with two tanks having sand bottoms. Thirty days after the temperature increased (during the winter) the first spawning occurred naturally, but only in tanks with sand on the bottom. During the breeding season, there were 24 spawning bouts with egg mass collections occurring as a result of the spawning bouts that occurred in the tanks. The hatching rates for eggs varied from 0% to 95%. The spawning bouts were mainly at night and on weekends. In the second reproductive period, the animals were sexed by cannulation and distributed in four tanks with all animals being maintained in tanks with sand on the bottom at 28°C. During this phase, there were 36 spawning bouts. Findings in the present study contribute to the understanding of the reproductive biology of this endangered species during captivity. PMID:26112799

  7. Gut content weight and clearance rate for three species of freshwater invertebrates

    SciTech Connect

    Brooke, L.T.; Ankley, G.T.; Call, D.J.; Cook, P.M.

    1996-02-01

    There is concern for potential error in the accurate estimation of chemical bioaccumulation in benthic organisms due to xenobiotics associated with gut contents (sediments). In this study the benthic macroinvertebrates Hexagenia limbata, Chironomus tentans, and Lumbriculus variegatus were exposed to five sediments from the Lower Fox River/Green Bay area of Wisconsin to determine the percentage of their weight due to gut contents and the rate at which guts were emptied when the animals were held in clean water. Upon removal from the test sediments, inorganic gut contents in H. limbata, C. tentans, and L. variegatus represented approximately 9, 10, and 10% of their whole body dry weights, respectively. Depuration rates were relatively rapid, with mayflies, midges, and oligochaetes losing approximately 75, 90, and 100% of their gut contents during the first 12 h of depuration. This suggests that a 12--24-h holding period in clean water at the conclusion of sediment bioaccumulation tests with the three species should be sufficient to eliminate potential bias in tissue residue concentrations due to gut contents.

  8. A New Cryptic Species of South American Freshwater Pufferfish of the Genus Colomesus (Tetraodontidae), Based on Both Morphology and DNA Data

    PubMed Central

    Amaral, Cesar R. L.; Brito, Paulo M.; Silva, Dayse A.; Carvalho, Elizeu F.

    2013-01-01

    The Tetraodontidae are an Acantomorpha fish family with circumglobal distribution composed of 189 species grouped in 19 genera, occurring in seas, estuaries, and rivers between the tropical and temperate regions. Of these, the genus Colomesus is confined to South America, with what have been up to now considered only two species. C. asellus is spread over the entire Amazon, Tocantins-Araguaia drainages, and coastal environments from the Amazon mouth to Venezuela, and is the only freshwater puffers on that continent. C. psittacus is found in coastal marine and brackish water environments from Cuba to the northern coast of South America as far south as to Sergipe in Brazil. In the present contribution we used morphological data along with molecular systematics techniques to investigate the phylogeny and phylogeography of the freshwater pufferfishes of the genus Colomesus. The molecular part is based on a cytochrome C oxidase subunit I dataset constructed from both previously published and newly determined sequences, obtained from specimens collected from three distinct localities in South America. Our results from both molecular and morphological approaches enable us to identify and describe a new Colomesus species from the Tocantins River. We also discuss aspects of the historical biogeography and phylogeography of the South American freshwater pufferfishes, suggesting that it could be more recent than previously expected. PMID:24040239

  9. Transcriptional and posttranscriptional regulation of cyanobacterial photosynthesis.

    PubMed

    Wilde, Annegret; Hihara, Yukako

    2016-03-01

    Cyanobacteria are well established model organisms for the study of oxygenic photosynthesis, nitrogen metabolism, toxin biosynthesis, and salt acclimation. However, in comparison to other model bacteria little is known about regulatory networks, which allow cyanobacteria to acclimate to changing environmental conditions. The current work has begun to illuminate how transcription factors modulate expression of different photosynthetic regulons. During the past few years, the research on other regulatory principles like RNA-based regulation showed the importance of non-protein regulators for bacterial lifestyle. Investigations on modulation of photosynthetic components should elucidate the contributions of all factors within the context of a larger regulatory network. Here, we focus on regulation of photosynthetic processes including transcriptional and posttranscriptional mechanisms, citing examples from a limited number of cyanobacterial species. Though, the general idea holds true for most species, important differences exist between various organisms, illustrating diversity of acclimation strategies in the very heterogeneous cyanobacterial clade. This article is part of a Special Issue entitled Organization and dynamics of bioenergetic systems in bacteria, edited by Prof Conrad Mullineaux. PMID:26549130

  10. Global change feed-back inhibits cyanobacterial photosynthesis.

    PubMed

    Walter Helbling, E; Banaszak, Anastazia T; Villafañe, Virginia E

    2015-01-01

    Cyanobacteria are an important component of aquatic ecosystems, with a proliferation of massive cyanobacterial blooms predicted worldwide under increasing warming conditions. In addition to temperature, other global change related variables, such as water column stratification, increases in dissolved organic matter (DOM) discharge into freshwater systems and greater wind stress (i.e., more opaque and mixed upper water column/epilimnion) might also affect the responses of cyanobacteria. However, the combined effects of these variables on cyanobacterial photosynthesis remain virtually unknown. Here we present evidence that this combination of global-change conditions results in a feed-back mechanism by which, fluctuations in solar ultraviolet radiation (UVR, 280-400 nm) due to vertical mixing within the epilimnion act synergistically with increased DOM to impair cyanobacterial photosynthesis as the water column progressively darkens. The main consequence of such a feed-back response is that these organisms will not develop large blooms in areas of latitudes higher than 30°, in both the Northern and Southern Hemispheres, where DOM inputs and surface wind stress are increasing. PMID:26415603

  11. Global change feed-back inhibits cyanobacterial photosynthesis

    PubMed Central

    Walter Helbling, E.; Banaszak, Anastazia T.; Villafañe, Virginia E.

    2015-01-01

    Cyanobacteria are an important component of aquatic ecosystems, with a proliferation of massive cyanobacterial blooms predicted worldwide under increasing warming conditions. In addition to temperature, other global change related variables, such as water column stratification, increases in dissolved organic matter (DOM) discharge into freshwater systems and greater wind stress (i.e., more opaque and mixed upper water column/epilimnion) might also affect the responses of cyanobacteria. However, the combined effects of these variables on cyanobacterial photosynthesis remain virtually unknown. Here we present evidence that this combination of global-change conditions results in a feed-back mechanism by which, fluctuations in solar ultraviolet radiation (UVR, 280–400 nm) due to vertical mixing within the epilimnion act synergistically with increased DOM to impair cyanobacterial photosynthesis as the water column progressively darkens. The main consequence of such a feed-back response is that these organisms will not develop large blooms in areas of latitudes higher than 30°, in both the Northern and Southern Hemispheres, where DOM inputs and surface wind stress are increasing. PMID:26415603

  12. Retinoid-like activity and teratogenic effects of cyanobacterial exudates.

    PubMed

    Jonas, Adam; Buranova, Veronika; Scholz, Stefan; Fetter, Eva; Novakova, Katerina; Kohoutek, Jiri; Hilscherova, Klara

    2014-10-01

    Retinoic acids and their derivatives have been recently identified by chemical analyses in cyanobacteria and algae. Given the essential role of retinoids for vertebrate development this has raised concerns about a potential risk for vertebrates exposed to retinoids during cyanobacterial blooms. Our study focuses on extracellular compounds produced by phytoplankton cells (exudates). In order to address the capacity for the production of retinoids or compounds with retinoid-like activity we compared the exudates of ten cyanobacteria and algae using in vitro reporter gene assay. Exudates of three cyanobacterial species showed retinoid-like activity in the range of 269-2,265 ng retinoid equivalents (REQ)/L, while there was no detectable activity in exudates of the investigated algal species. The exudates of one green alga (Desmodesmus quadricaudus) and the two cyanobacterial species with greatest REQ levels, Microcystis aeruginosa and Cylindrospermopsis raciborskii, were selected for testing of the potential relation of retinoid-like activity to developmental toxicity in zebrafish embryos. The exudates of both cyanobacteria were indeed provoking diverse teratogenic effects (e.g. tail, spine and mouth deformation) and interference with growth in zebrafish embryos, while such effects were not observed for the alga. Fish embryos were also exposed to all-trans retinoic acid (ATRA) in a range equivalent to the REQ concentrations detected in exudates by in vitro bioassays. Both the phenotypes and effective concentrations of exudates corresponded to ATRA equivalents, supporting the hypothesis that the teratogenic effects of cyanobacterial exudates are likely to be associated with retinoid-like activity. The study documents that some cyanobacteria are able to produce and release retinoid-like compounds into the environment at concentrations equivalent to those causing teratogenicity in zebrafish. Hence, the characterization of retinoid-like and teratogenic potency should be

  13. Five new species of Urocleidoides (Monogenoidea) (Mizelle and Price 1964) Kritsky, Thatcher, and Boeger, 1986, parasitizing the gills of Panamanian freshwater fishes.

    PubMed

    Mendoza-Franco, Edgar F; Reina, Ruth G

    2008-08-01

    During an investigation of gill monogenoidean parasites from freshwater fishes in central Panama, 5 new species of Urocleidoides (sensu stricto) were found: Urocleidoides cultellus n. sp., Urocleidoides visiofortatus n. sp., and Urocleidoides advenai n. sp. from the gymnotiform Brachyhypopomus occidentalis (Hypopomidae); Urocleidoides neotropicalis n. sp. and Urocleidoides piriatiu n. sp. from the characiforms Saccodon dariensis (Parodontidae) and Ctenolucius beani (Ctenoluciidae), respectively. Our findings represent the first known species of Urocleidoides from these fishes in Central America and demonstrate that they are morphologically linked to their South American congeners. PMID:18837577

  14. Shifts in Cyanobacterial Strain Dominance during the Onset of Harmful Algal Blooms in Florida Bay, USA.

    PubMed

    Berry, Dianna L; Goleski, Jennifer A; Koch, Florian; Wall, Charles C; Peterson, Bradley J; Anderson, O Roger; Gobler, Christopher J

    2015-08-01

    Cyanobacteria are fundamental components of aquatic phytoplankton communities and some taxa can cause harmful blooms in coastal ecosystems. Harmful cyanobacterial blooms are typically comprised of multiple strains of a single genus or species that cannot be resolved microscopically. Florida Bay, USA, has experienced harmful cyanobacterial blooms that have been associated with the loss of eelgrass, spiny lobsters, and general food web disruption for more than two decades. To identify the strain or strains of cyanobacteria forming blooms in Florida Bay, samples were collected across the system over an annual cycle and analyzed via DNA sequencing using cyanobacterial-specific 16S rRNA gene primers, flow cytometry, and scanning electron microscopy. Analyses demonstrated that the onset of blooms in Florida Bay was coincident with a transformation of the cyanobacterial populations. When blooms were absent, the cyanobacterial population in Florida Bay was dominated by phycoerythrin-containing Synechococcus cells that were most similar to strains within Clade III. As blooms developed, the cyanobacterial community transitioned to dominance by phycocyanin-containing Synechococcus cells that were coated with mucilage, chain-forming, and genetically most similar to the coastal strains within Clade VIII. Clade VIII strains of Synechococcus are known to grow rapidly, utilize organic nutrients, and resist top-down control by protozoan grazers and viruses, all characteristics consistent with observations of cyanobacterial blooms in Florida Bay. Further, the strains of Synechococcus blooming in this system are genetically distinct from the species previously thought to cause blooms in Florida Bay, Synechococcus elongatus. Collectively, this study identified the causative organism of harmful cyanobacterial blooms in Florida Bay, demonstrates the dynamic nature of cyanobacterial stains within genera in an estuary, and affirms factors promoting Synechococcus blooms. PMID:25661475

  15. Freshwater Macroinvertebrates.

    ERIC Educational Resources Information Center

    Nalepa, T. F.

    1978-01-01

    Presents a literature review of freshwater biology particularly freshwater macroinvertebrates and their effect on water pollution, covering publications of 1976-77. A list of 158 references is also presented. (HM)

  16. Study of diatoms/aqueous solution interface. I. Acid-base equilibria and spectroscopic observation of freshwater and marine species

    NASA Astrophysics Data System (ADS)

    Gélabert, A.; Pokrovsky, O. S.; Schott, J.; Boudou, A.; Feurtet-Mazel, A.; Mielczarski, J.; Mielczarski, E.; Mesmer-Dudons, N.; Spalla, O.

    2004-10-01

    This work reports on a concerted study of diatom-water interfaces for two marine planktonic ( Thalassiosira weissflogii= TW, Skeletonema costatum= SC) and two freshwater periphytic species ( Achnanthidium minutissimum= AMIN, Navicula minima= NMIN). Proton surface adsorption was measured at 25°C, pH of 3 to 11 and ionic strength of 0.001 to 1.0 M via potentiometric titration using a limited residence time reactor. Electrophoretic mobility of living cells and their frustules was measured as a function of pH and ionic strength. Information on the chemical composition and molecular structure of diatoms surfaces was obtained using FT-IR (in situ attenuated total reflectance) and X-ray Photoelectron Spectroscopy (XPS). The surface area of living cells and their frustules in aqueous solutions was quantified using Small Angle X-ray Scattering Spectroscopy (SAXS). These observations allowed us to identify the nature and to determine the concentration of the major surface functional groups (carboxyl, amine and silanol) responsible for the amphoteric behavior of cell surfaces in aqueous solutions. Taking into account the relative proportion of surface sites inferred from XPS and FT-IR measurements, a surface complexation model of diatom-solution interfaces was generated on the basis of surface titration results. The cell-normalized ratios of the three major surface sites {>COOH}: {>NH 3}: {>SiOH} are 1:1:0.1, 1:10:0, 1:1:0.4 and 1:1:0.3 for TW, SC, AMIN and NMIN, respectively. The total amount of proton/hydroxyl active surface sites for investigated species ranges from 1 (NMIN) to 9 (SC) mmol/g dry weight. Normalization of these site densities to the area of siliceous skeleton yields values between 0.3 (NMIN) and 0.9 mmol/m 2 (SC) which are an order of magnitude higher than corresponding values for organic-free frustules or amorphous silica. This suggests that the amphoteric properties and possibly the affinity for metal adsorption of diatom cultures are essentially

  17. Two new species of Phyllodistomum Braun, 1899 (Digenea: Gorgoderidae), from freshwater fishes (Cyprinodontiformes: Goodeidae: Goodeinae) in central Mexico: An integrative taxonomy approach using morphology, ultrastructure and molecular phylogenetics.

    PubMed

    Pérez-Ponce de León, Gerardo; Martínez-Aquino, Andrés; Mendoza-Garfias, Berenit

    2015-01-01

    An integrative taxonomy approach is used to characterise the diversity of gorgoderid trematodes that parasitize freshwater fishes of the subfamily Goodeinae in central Mexico. Records of Phyllodistomum sp. and Dendrorchis sp. from the urinary bladder of goodeines have been previously published, although the identification at species level was not achieved. A few specimens were collected and fixed to conduct a scanning electron microscopy study, and to obtain sequences of a mitochondrial (COI) and nuclear (28S rRNA) gene, to be analysed in the context of the molecular phylogeny of gorgoderid trematodes. Based on the new findings, two new species of Phyllodistomum Braun, 1899 are described. Phyllodistomum cribbi n. sp. was found in Zoogoneticus quitzeoensis (Bean), Allotoca zacapuensis Meyer, Radda & Domínguez-Domínguez, Hubbsina turneri de Buen and Z. purhepechus Domínguez-Domínguez, Pérez-Rodríguez & Doadrio from Zacapu Lake, and La Luz Spring, in Michoacan, central Mexico. Phyllodistomum wallacei n. sp. parasitized Xenotaenia resolanae Turner, Ilyodon furcidens (Jordan & Gilbert), and Allodontichthys tamazulae Turner from the Cuzalapa, Ayuquila and Tamazula Rivers in Jalisco, western Mexico. These species are compared with several freshwater Phyllodistomum species from different areas of the world, especially a group of eight species that comprise a monophyletic clade in recent phylogenetic hypotheses of the Gorgoderidae Looss, 1899. The two new species are distinguished from other close relatives by the combination of morphological traits such as the body shape, sucker ratio, shape of the gonads, and extension of intestinal ceca. The new species are distinct in some ultrastructural characters of the body surface when compared with those species where scanning electron micrographs (SEM) and/or microphotographs are available. Data of two molecular markers (28S rRNA and COI genes) demonstrate that the two new species are distinct from each other and from those

  18. Sperm in "parhenogenetic" freshwater gastrotrichs.

    PubMed

    Weiss, M J; Levy, D P

    1979-07-20

    Freshwater members of the phylum Gastrotricha have been considered obligate parthenogens. In Lepidodermelia squammata, the species for which there is most evidence for parthenogenesis, sperm have been discovered. This finding will necessitate reexamination of the nature of sexuality and life cycles and of the concept of "species" in freshwater gastrotrichs. PMID:17747043

  19. Toxicity of nickel-spiked freshwater sediments to benthic invertebrates-Spiking methodology, species sensitivity, and nickel bioavailability

    USGS Publications Warehouse

    Besser, John M.; Brumbaugh, William G.; Kemble, Nile E.; Ivey, Chris D.; Kunz, James L.; Ingersoll, Christopher G.; Rudel, David

    2011-01-01

    This report summarizes data from studies of the toxicity and bioavailability of nickel in nickel-spiked freshwater sediments. The goal of these studies was to generate toxicity and chemistry data to support development of broadly applicable sediment quality guidelines for nickel. The studies were conducted as three tasks, which are presented here as three chapters: Task 1, Development of methods for preparation and toxicity testing of nickel-spiked freshwater sediments; Task 2, Sensitivity of benthic invertebrates to toxicity of nickel-spiked freshwater sediments; and Task 3, Effect of sediment characteristics on nickel bioavailability. Appendices with additional methodological details and raw chemistry and toxicity data for the three tasks are available online at http://pubs.usgs.gov/sir/2011/5225/downloads/.

  20. Factors influencing tropical island freshwater fishes:Species, status, and management implications in puerto rico [Factores que influencian a los peces tropicales de agua dulce: Especies, estado actual e implicaciones para el manejo en Puerto Rico

    USGS Publications Warehouse

    Wesley, Neal J.; Lilyestrom, C.G.; Kwak, T.J.

    2009-01-01

    Anthropogenic effects including river regulation, watershed development, contamination, and fish introductions have substantially affected the majority of freshwater habitats in Europe and North America. This pattern of resource development and degradation is widespread in the tropics, and often little is known about the resources before they are lost. This article describes the freshwater resources of Puerto Rico and identifies factors that threaten conservation of native fishes. The fishes found in freshwater habitats of Puerto Rico represent a moderately diverse assemblage composed of 14 orders, 29 families, and 82 species. There are fewer than 10 species of native peripherally-freshwater fish that require a link to marine systems. Introductions of nonindigenous species have greatly expanded fish diversity in freshwater systems, and native estuarine and marine species (18 families) also commonly enter lowland rivers and brackish lagoons. Environmental alterations, including land use and development, stream channelization, pollution, and the impoundment of rivers, combined with nonnative species introductions threaten the health and sustainability of aquatic resources in Puerto Rico. Six principal areas for attention that are important influences on the current and future status of the freshwater fish resources of Puerto Rico are identified and discussed.

  1. Laboratory and field validation of a simple method for detecting four species of non-native freshwater fish using eDNA.

    PubMed

    Davison, P I; Créach, V; Liang, W-J; Andreou, D; Britton, J R; Copp, G H

    2016-09-01

    This paper presents the first phase in the development and validation of a simple and reliable environmental (e)DNA method using conventional PCR to detect four species of non-native freshwater fish: pumpkinseed Lepomis gibbosus, sunbleak Leucaspius delineatus, fathead minnow Pimephales promelas and topmouth gudgeon Pseudorasbora parva. The efficacy of the approach was demonstrated in indoor tank (44 l) trials in which all four species were detected within 24 h. Validation was through two field trials, in which L. gibbosus was detected 6-12 h after its introduction into outdoor experimental ponds and P. parva was successfully detected in disused fish rearing ponds where the species was known to exist. Thus, the filtration of small (30 ml) volumes of pond water was sufficient to capture fish eDNA and the approach emphasised the importance of taking multiple water samples of sufficient spatial coverage for detecting species of random or patchy distribution. PMID:27465299

  2. A new species of freshwater sponge, Heteromeyenia barlettai sp. nov. from an aquarium in São Paulo, Brazil (Spongillida: Spongillidae).

    PubMed

    Pinheiro, Ulisses; Calheira, Ludimila; Hajdu, Eduardo

    2015-01-01

    A new species of freshwater sponge, Heteromeyenia barlettai sp. nov., is proposed here based on specimens discovered in a private aquarium in São Paulo, Brazil, and most likely inadvertently collected from the Paraná Basin. The present study also presents a redescription of H. insignis on the basis of the specimen reported upon by Volkmer (1963), collected from the Atlântico Sul Hydrographic Basin. Spicule measurements (n=30) were made for comparison with other Heteromeyenia species. This is the first time that H. insignis has its complete set of spicules studied under SEM. After comparison with the redescription of the type of H. baileyi, we also find characteristics that justify the maintenance of H. insignis as a valid species. A key to species of Heteromeyenia is provided. PMID:26624446

  3. The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park.

    PubMed

    Becraft, Eric D; Wood, Jason M; Rusch, Douglas B; Kühl, Michael; Jensen, Sheila I; Bryant, Donald A; Roberts, David W; Cohan, Frederick M; Ward, David M

    2015-01-01

    Based on the Stable Ecotype Model, evolution leads to the divergence of ecologically distinct populations (e.g., with different niches and/or behaviors) of ecologically interchangeable membership. In this study, pyrosequencing was used to provide deep sequence coverage of Synechococcus psaA genes and transcripts over a large number of habitat types in the Mushroom Spring microbial mat. Putative ecological species [putative ecotypes (PEs)], which were predicted by an evolutionary simulation based on the Stable Ecotype Model (Ecotype Simulation), exhibited distinct distributions relative to temperature-defined positions in the effluent channel and vertical position in the upper 1 mm-thick mat layer. Importantly, in most cases variants predicted to belong to the same PE formed unique clusters relative to temperature and depth in the mat in canonical correspondence analysis, supporting the hypothesis that while the PEs are ecologically distinct, the members of each ecotype are ecologically homogeneous. PEs responded differently to experimental perturbations of temperature and light, but the genetic variation within each PE was maintained as the relative abundances of PEs changed, further indicating that each population responded as a set of ecologically interchangeable individuals. Compared to PEs that predominate deeper within the mat photic zone, the timing of transcript abundances for selected genes differed for PEs that predominate in microenvironments closer to upper surface of the mat with spatiotemporal differences in light and O2 concentration. All of these findings are consistent with the hypotheses that Synechococcus species in hot spring mats are sets of ecologically interchangeable individuals that are differently adapted, that these adaptations control their distributions, and that the resulting distributions constrain the activities of the species in space and time. PMID:26157420

  4. The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park

    PubMed Central

    Becraft, Eric D.; Wood, Jason M.; Rusch, Douglas B.; Kühl, Michael; Jensen, Sheila I.; Bryant, Donald A.; Roberts, David W.; Cohan, Frederick M.; Ward, David M.

    2015-01-01

    Based on the Stable Ecotype Model, evolution leads to the divergence of ecologically distinct populations (e.g., with different niches and/or behaviors) of ecologically interchangeable membership. In this study, pyrosequencing was used to provide deep sequence coverage of Synechococcus psaA genes and transcripts over a large number of habitat types in the Mushroom Spring microbial mat. Putative ecological species [putative ecotypes (PEs)], which were predicted by an evolutionary simulation based on the Stable Ecotype Model (Ecotype Simulation), exhibited distinct distributions relative to temperature-defined positions in the effluent channel and vertical position in the upper 1 mm-thick mat layer. Importantly, in most cases variants predicted to belong to the same PE formed unique clusters relative to temperature and depth in the mat in canonical correspondence analysis, supporting the hypothesis that while the PEs are ecologically distinct, the members of each ecotype are ecologically homogeneous. PEs responded differently to experimental perturbations of temperature and light, but the genetic variation within each PE was maintained as the relative abundances of PEs changed, further indicating that each population responded as a set of ecologically interchangeable individuals. Compared to PEs that predominate deeper within the mat photic zone, the timing of transcript abundances for selected genes differed for PEs that predominate in microenvironments closer to upper surface of the mat with spatiotemporal differences in light and O2 concentration. All of these findings are consistent with the hypotheses that Synechococcus species in hot spring mats are sets of ecologically interchangeable individuals that are differently adapted, that these adaptations control their distributions, and that the resulting distributions constrain the activities of the species in space and time. PMID:26157420

  5. Occurrence of arsenic species in algae and freshwater plants of an extreme arid region in northern Chile, the Loa River Basin.

    PubMed

    Pell, Albert; Márquez, Anna; López-Sánchez, José Fermín; Rubio, Roser; Barbero, Mercedes; Stegen, Susana; Queirolo, Fabrizio; Díaz-Palma, Paula

    2013-01-01

    This study reports data on arsenic speciation in two green algae species (Cladophora sp. and Chara sp.) and in five aquatic plants (Azolla sp., Myriophyllum aquaticum, Phylloscirpus cf. desserticola, Potamogeton pectinatus, Ruppia filifolia and Zannichellia palustris) from the Loa River Basin in the Atacama Desert (northern Chile). Arsenic content was measured by Mass spectrometry coupled with Inductively Coupled Plasma (ICP-MS), after acidic digestion. Liquid chromatography coupled to ICP-MS was used for arsenic speciation, using both anionic and cationic chromatographic exchange systems. Inorganic arsenic compounds were the main arsenic species measured in all samples. The main arsenic species in the extracts of freshwater algae and plants were arsenite and arsenate, whereas glycerol-arsenosugar (gly-sug), dimethylarsinic acid (DMA) and methylarsonic acid (MA) were present only as minor constituents. Of the samples studied, algae species accumulated more arsenic than aquatic plants. Total arsenic content ranged from 182 to 11100 and from 20 to 248 mg As kg(-1) (d.w.) in algae and freshwater plants, respectively. In comparison with As concentration in water samples, there was hyper-accumulation (>0.1% d.w.) in Cladophora sp. PMID:22981629

  6. Cyanobacterial Neurotoxin BMAA and Mercury in Sharks.

    PubMed

    Hammerschlag, Neil; Davis, David A; Mondo, Kiyo; Seely, Matthew S; Murch, Susan J; Glover, William Broc; Divoll, Timothy; Evers, David C; Mash, Deborah C

    2016-01-01

    Sharks have greater risk for bioaccumulation of marine toxins and mercury (Hg), because they are long-lived predators. Shark fins and cartilage also contain β-N-methylamino-l-alanine (BMAA), a ubiquitous cyanobacterial toxin linked to neurodegenerative diseases. Today, a significant number of shark species have found their way onto the International Union for Conservation of Nature (IUCN) Red List of Threatened Species. Many species of large sharks are threatened with extinction due in part to the growing high demand for shark fin soup and, to a lesser extent, for shark meat and cartilage products. Recent studies suggest that the consumption of shark parts may be a route to human exposure of marine toxins. Here, we investigated BMAA and Hg concentrations in fins and muscles sampled in ten species of sharks from the South Atlantic and Pacific Oceans. BMAA was detected in all shark species with only seven of the 55 samples analyzed testing below the limit of detection of the assay. Hg concentrations measured in fins and muscle samples from the 10 species ranged from 0.05 to 13.23 ng/mg. These analytical test results suggest restricting human consumption of shark meat and fins due to the high frequency and co-occurrence of two synergistic environmental neurotoxic compounds. PMID:27537913

  7. Cyanobacterial Neurotoxin BMAA and Mercury in Sharks

    PubMed Central

    Hammerschlag, Neil; Davis, David A.; Mondo, Kiyo; Seely, Matthew S.; Murch, Susan J.; Glover, William Broc; Divoll, Timothy; Evers, David C.; Mash, Deborah C.

    2016-01-01

    Sharks have greater risk for bioaccumulation of marine toxins and mercury (Hg), because they are long-lived predators. Shark fins and cartilage also contain β-N-methylamino-l-alanine (BMAA), a ubiquitous cyanobacterial toxin linked to neurodegenerative diseases. Today, a significant number of shark species have found their way onto the International Union for Conservation of Nature (IUCN) Red List of Threatened Species. Many species of large sharks are threatened with extinction due in part to the growing high demand for shark fin soup and, to a lesser extent, for shark meat and cartilage products. Recent studies suggest that the consumption of shark parts may be a route to human exposure of marine toxins. Here, we investigated BMAA and Hg concentrations in fins and muscles sampled in ten species of sharks from the South Atlantic and Pacific Oceans. BMAA was detected in all shark species with only seven of the 55 samples analyzed testing below the limit of detection of the assay. Hg concentrations measured in fins and muscle samples from the 10 species ranged from 0.05 to 13.23 ng/mg. These analytical test results suggest restricting human consumption of shark meat and fins due to the high frequency and co-occurrence of two synergistic environmental neurotoxic compounds. PMID:27537913

  8. Assessment of the Species Composition, Densities, and Distribution of Native Freshwater Mussels along the Benton County Shoreline of the Hanford Reach, Columbia River, 2004

    SciTech Connect

    Mueller, Robert P.; Tiller, Brett L.; Bleich, Matthew D.; Turner, Gerald; Welch, Ian D.

    2011-01-31

    The Hanford Reach of the Columbia River is the last unimpounded section of the river and contains substrate characteristics (cobble, gravel, sand/silt) suitable for many of the native freshwater mussels known to exist in the Pacific Northwest. Information concerning the native mussel species composition, densities, and distributions in the mainstem of the Columbia River is limited. Under funding from the U.S. Department of Energy Richland Operations Office (DOE-RL), Pacific Northwest National Laboratory conducted an assessment of the near-shore habitat on the Hanford Reach. Surveys conducted in 2004 as part of the Ecological Monitoring and Compliance project documented several species of native mussels inhabiting the near-shore habitat of the Hanford Reach. Findings reported here may be useful to resource biologists, ecologists, and DOE-RL to determine possible negative impacts to native mussels from ongoing near-shore remediation activities associated with Hanford Site cleanup. The objective of this study was to provide an initial assessment of the species composition, densities, and distribution of the freshwater mussels (Margaritiferidae and Unionidae families) that exist in the Hanford Reach. Researchers observed and measured 201 live native mussel specimens. Mussel density estimated from these surveys is summarized in this report with respect to near-shore habitat characteristics including substrate size, substrate embeddedness, relative abundance of aquatic vegetation, and large-scale geomorphic/hydrologic characteristics of the Hanford Reach.

  9. A survey of coccidian infections of freshwater fishes of Peninsular Malaysia, with descriptions of three species of Goussia Labbé, 1896 (Apicomplexa: Eimeriidae).

    PubMed

    Molnár, K; Shaharom-Harrison, F; Székely, Cs

    2003-05-01

    Ninety-five specimens of 14 freshwater fish species from small streams in the Kuala Terengganu district and the Lake Kenyir Reservoir, Malaysia, were surveyed for coccidian infections. Six fish species proved to be infected with apicomplexans belonging to the genus Goussia. In all of these fishes Goussia species were found in unsporulated and semisporulated stages. Oöcysts of four species inhabiting the intestinal epithelium became sporulated in tap-water within 24 hours. In two fish species sporulation failed and only unsporulated oöcysts were recorded in the intestine. Three of the intestinal species finishing sporulation proved to be new to science and were described as Goussia malayensis n. sp., G. bettae n. sp. and G. pogonognathi n. sp. from Apocheilus panchax, Betta splendens and Hemirhamphodon pogonognatus, respectively. The fourth species, found in Trichogaster pectoralis, was identified as G. trichogasteri Székely & Molnár, 1992, a species known from aquarium-cultured T. trichopterus. PMID:12815211

  10. Proteomic Analysis of Hepatic Tissue of Cyprinus carpio L. Exposed to Cyanobacterial Blooms in Lake Taihu, China

    PubMed Central

    Jiang, Jinlin; Wang, Xiaorong; Shan, Zhengjun; Yang, Liuyan; Zhou, Junying; Bu, Yuanqin

    2014-01-01

    With the rapid development of industry and agriculture and associated pollution, the cyanobacterial blooms in Lake Taihu have become a major threat to aquatic wildlife and human health. In this study, the ecotoxicological effects of cyanobacterial blooms on cage-cultured carp (Cyprinus carpio L.) in Meiliang Bay of Lake Taihu were investigated. Microcystins (MCs), major cyanobacterial toxins, have been detected in carp cultured at different experimental sites of Meiliang Bay. We observed that the accumulation of MCs in carp was closely associated with several environmental factors, including temperature, pH value, and density of cyanobacterial blooms. The proteomic profile of carp liver exposed to cyanobacterial blooms was analyzed using two-dimensional difference in-gel electrophoresis (2D-DIGE) and mass spectrometry. The toxic effects of cyanobacterial blooms on carp liver were similar to changes caused by MCs. MCs were transported into liver cells and induced the excessive production of reactive oxygen species (ROS). MCs and ROS inhibited protein phosphatase and aldehyde dehydrogenase (ALDH), directly or indirectly resulting in oxidative stress and disruption of the cytoskeleton. These effects further interfered with metabolic pathways in the liver through the regulation of series of related proteins. The results of this study indicated that cyanobacterial blooms pose a major threat to aquatic wildlife in Meiliang Bay in Lake Taihu. These results provided evidence of the molecular mechanisms underlying liver damage in carp exposed to cyanobacterial blooms. PMID:24558380

  11. The legacy of a vanished sea: a high level of diversification within a European freshwater amphipod species complex driven by 15 My of Paratethys regression.

    PubMed

    Mamos, Tomasz; Wattier, Remi; Burzyński, Artur; Grabowski, Michał

    2016-02-01

    The formation of continental Europe in the Neogene was due to the regression of the Tethys Ocean and of the Paratethys Sea. The dynamic geology of the area and repetitious transitions between marine and freshwater conditions presented opportunities for the colonization of newly emerging hydrological networks and diversification of aquatic biota. Implementing mitochondrial and nuclear markers in conjunction with a large-scale sampling strategy, we investigated the impact of this spatiotemporal framework on the evolutionary history of a freshwater crustacean morphospecies. The Gammarus balcanicus species complex is widely distributed in the area previously occupied by the Paratethys Sea. Our results revealed its high diversification and polyphyly in relation to a number of other morphospecies. The distribution of the studied amphipod is generally characterized by very high local endemism and divergence. The Bayesian time-calibrated reconstruction of phylogeny and geographical distribution of ancestral nodes indicates that this species complex started to diversify in the Early Miocene in the central Balkans, partially in the shallow epicontinental sea. It is possible that there were several episodes of inland water colonization by local brackish water lineages. Subsequent diversification within clades and spread to new areas could have been induced by Alpine orogeny in the Miocene/Pliocene and, finally, by Pleistocene glaciations. The present distribution of clades, in many cases, still reflects Miocene palaeogeography of the area. Our results point out that investigations of the historical aspect of cryptic diversity in other taxa may help in a general understanding of the origins of freshwater invertebrate fauna of Europe. PMID:26615060

  12. Transcriptomic Profiling of Differential Responses to Drought in Two Freshwater Mussel Species, the Giant Floater Pyganodon grandis and the Pondhorn Uniomerus tetralasmus

    PubMed Central

    Landis, Andrew Gascho; Wang, Guiling; Stoeckel, James; Peatman, Eric

    2014-01-01

    The southeastern US has experienced recurrent drought during recent decades. Increasing demand for water, as precipitation decreases, exacerbates stress on the aquatic biota of the Southeast: a global hotspot for freshwater mussel, crayfish, and fish diversity. Freshwater unionid mussels are ideal candidates to study linkages between ecophysiological and behavioral responses to drought. Previous work on co-occurring mussel species suggests a coupling of physiology and behavior along a gradient ranging from intolerant species such as Pyganodon grandis (giant floater) that track receding waters and rarely burrow in the substrates to tolerant species such as Uniomerus tetralasmus (pondhorn) that rarely track receding waters, but readily burrow into the drying sediments. We utilized a next-generation sequencing-based RNA-Seq approach to examine heat/desiccation-induced transcriptomic profiles of these two species in order to identify linkages between patterns of gene expression, physiology and behavior. Sequencing produced over 425 million 100 bp reads. Using the de novo assembly package Trinity, we assembled the short reads into 321,250 contigs from giant floater (average length 835 bp) and 385,735 contigs from pondhorn (average length 929 bp). BLAST-based annotation and gene expression analysis revealed 2,832 differentially expressed genes in giant floater and 2,758 differentially expressed genes in pondhorn. Trancriptomic responses included changes in molecular chaperones, oxidative stress profiles, cell cycling, energy metabolism, immunity, and cytoskeletal rearrangements. Comparative analyses between species indicated significantly higher induction of molecular chaperones and cytoskeletal elements in the intolerant P. grandis as well as important differences in genes regulating apoptosis and immunity. PMID:24586812

  13. Molecular identification of the economically important freshwater mussels (Mollusca-Bivalvia-Unionoida) of Thailand: developing species-specific markers from AFLPs.

    PubMed

    Vannarattanarat, S; Zieritz, A; Kanchanaketu, T; Kovitvadhi, U; Kovitvadhi, S; Hongtrakul, V

    2014-04-01

    Shells of certain freshwater mussel (Unionoida) species are highly demanded and serve as raw material for a range of decorative and pharmaceutical products. In Thailand, most animals for this purpose are currently harvested from wild populations, with unionoid culture still being in its infancy. Whilst reliable species identification is a prerequisite for developing a large-scale industry, identification by morphological means is hampered by extensive phenotypic plasticity and poor knowledge of species delimitations. To facilitate alternative molecular identification, we developed species-specific markers for the three Thai unionoids with considerable economic potential (CEP): that is, Chamberlainia hainesiana, Hyriopsis desowitzi and Hyriopsis myersiana. For this purpose, amplified fragment length polymorphism (AFLP) fingerprints using 24 specific primer pairs were generated for eight samples of each CEP species and four samples of the closely related, non-CEP species Contradens contradens. Cloning and sequencing of 13 CEP species-specific AFLP bands revealed fragment collision at three occasions. In total, 16 species-specific primer pairs were designed and tested on 92 Thai specimens spanning seven species and four genera. Thereby, specificity of (1) three primers to C. hainesiana, (2) one primer to H. desowitzi + Hyriopsis bialata, (3) one primer to H. myersiana + H. bialata and (4) four primers to all three Hyriopsis species tested was confirmed. Respective multiplex PCR protocols are provided. The developed primers enable cheap, quick and reliable identification of the Thai CEP species by one to three PCRs and offer a tool for a range of additional applications within mussel culture and ecological and evolutionary research on these important organisms. PMID:24313464

  14. Integrative taxonomy of a new species of planarian from the Lake Ohrid basin, including an analysis of biogeographical patterns in freshwater triclads from the Ohrid region (Platyhelminthes, Tricladida, Dugesiidae)

    PubMed Central

    Stocchino, Giacinta Angela; Sluys, Ronald; Deri, Paolo; Manconi, Renata

    2013-01-01

    Abstract A new species of the genus Dugesia is described from the Lake Ohrid region in the western part of the Balkan Peninsula, forming the first fully documented species description for this genus in the Ohrid area. The morphological species delimitation is supported by complementary molecular, karyological, and cytogenetic data available from the literature. Therefore, species delineation is based on a truly integrative approach. Further, a short account on the degree of freshwater planarian endemicity in the Ohrid region is provided. PMID:23840163

  15. Integrative taxonomy of a new species of planarian from the Lake Ohrid basin, including an analysis of biogeographical patterns in freshwater triclads from the Ohrid region (Platyhelminthes, Tricladida, Dugesiidae).

    PubMed

    Stocchino, Giacinta Angela; Sluys, Ronald; Deri, Paolo; Manconi, Renata

    2013-01-01

    A new species of the genus Dugesia is described from the Lake Ohrid region in the western part of the Balkan Peninsula, forming the first fully documented species description for this genus in the Ohrid area. The morphological species delimitation is supported by complementary molecular, karyological, and cytogenetic data available from the literature. Therefore, species delineation is based on a truly integrative approach. Further, a short account on the degree of freshwater planarian endemicity in the Ohrid region is provided. PMID:23840163

  16. Determining the native/non-native status of newly discovered terrestrial and freshwater species in Antarctica - current knowledge, methodology and management action.

    PubMed

    Hughes, Kevin A; Convey, Peter

    2012-01-01

    Continental Antarctic terrestrial and freshwater environments currently have few established non-native species compared to the sub-Antarctic islands and other terrestrial ecosystems on Earth. This is due to a unique combination of factors including Antarctica's remoteness, harsh climate, physical geography and brief history of human activity. However, recent increases in national operator and tourism activities increase the risk of non-native propagules reaching Antarctica, while climate change may make successful establishment more likely. The frequency and probability of human-assisted transfer mechanisms appear to far outweigh those of natural propagule introductions by wind, water, birds and marine mammals. A dilemma for scientists and environmental managers, which is exacerbated by a poor baseline knowledge of Antarctic biodiversity, is how to determine the native/non-native status of a newly discovered species which could be (a) a previously undiscovered long-term native species, (b) a recent natural colonist or (c) a human-mediated introduction. A correct diagnosis is crucial as the Protocol on Environmental Protection to the Antarctic Treaty dictates dramatically different management responses depending on native/non-native status: native species and recent natural colonists should be protected and conserved, while non-native introductions should be eradicated or controlled. We review current knowledge on how available evidence should be used to differentiate between native and non-native species, and discuss and recommend issues that should be considered by scientists and managers upon discovery of a species apparently new to the Antarctic region. PMID:22054571

  17. Influence of species and sex on metal residues in freshwater mussels (Family Unionidae) from the St. Lawrence River, with implications for biomonitoring programs

    SciTech Connect

    Metcalfe-Smith, J.L. . Rivers Research Branch)

    1994-09-01

    The implementation of freshwater mussel watch programs has been hindered by a lack of information on biological factors affecting the levels of contaminants accumulated by these organisms. This study investigated the influence of species and sex on metal residues in Elliptio complanata and Lampsilis radiata radiata (Family Unionidae) from the St. Lawrence River. Mussels were collected from sites representing a wide range of types and degrees of metal pollution. Composite samples of five specimens (males and females combined) per species per site and five specimens per sex per species per site were analyzed for residues of 12 metals in the soft tissues to determine the effects of species and sex, respectively, on variability in the data. Interspecific differences in bioaccumulation were observed for most metals; however, concentrations were frequently correlated between species and the differences could therefore be quantified. Elliptio complanata demonstrated a broader response range to the same exposures than Lampsilis radiata radiata for most metals, suggesting that it may be more sensitive to changes in pollution status. Differences in metal uptake between the sexes were less pronounced than differences between species, and male specimens displayed less variability than females. Consideration of these factors in mussel biomonitoring programs should greatly improve sensitivity and precision.

  18. The Role of Nitrogen Fixation in Cyanobacterial Bloom Toxicity in a Temperate, Eutrophic Lake

    PubMed Central

    Beversdorf, Lucas J.; Miller, Todd R.; McMahon, Katherine D.

    2013-01-01

    Toxic cyanobacterial blooms threaten freshwaters worldwide but have proven difficult to predict because the mechanisms of bloom formation and toxin production are unknown, especially on weekly time scales. Water quality management continues to focus on aggregated metrics, such as chlorophyll and total nutrients, which may not be sufficient to explain complex community changes and functions such as toxin production. For example, nitrogen (N) speciation and cycling play an important role, on daily time scales, in shaping cyanobacterial communities because declining N has been shown to select for N fixers. In addition, subsequent N pulses from N2 fixation may stimulate and sustain toxic cyanobacterial growth. Herein, we describe how rapid early summer declines in N followed by bursts of N fixation have shaped cyanobacterial communities in a eutrophic lake (Lake Mendota, Wisconsin, USA), possibly driving toxic Microcystis blooms throughout the growing season. On weekly time scales in 2010 and 2011, we monitored the cyanobacterial community in a eutrophic lake using the phycocyanin intergenic spacer (PC-IGS) region to determine population dynamics. In parallel, we measured microcystin concentrations, N2 fixation rates, and potential environmental drivers that contribute to structuring the community. In both years, cyanobacterial community change was strongly correlated with dissolved inorganic nitrogen (DIN) concentrations, and Aphanizomenon and Microcystis alternated dominance throughout the pre-toxic, toxic, and post-toxic phases of the lake. Microcystin concentrations increased a few days after the first significant N2 fixation rates were observed. Then, following large early summer N2 fixation events, Microcystis increased and became most abundant. Maximum microcystin concentrations coincided with Microcystis dominance. In both years, DIN concentrations dropped again in late summer, and N2 fixation rates and Aphanizomenon abundance increased before the lake mixed in

  19. Alternative isoleucine synthesis pathway in cyanobacterial species.

    PubMed

    Wu, Bing; Zhang, Baichen; Feng, Xueyang; Rubens, Jacob R; Huang, Rick; Hicks, Leslie M; Pakrasi, Himadri B; Tang, Yinjie J

    2010-02-01

    Cyanothece sp. ATCC 51142 is an aerobic N(2)-fixing and hydrogen-producing cyanobacterium. Isotopomer analysis of its amino acids revealed an identical labelling profile for leucine and isoleucine when Cyanothece 51142 was grown mixotrophically using 2-(13)C-labelled glycerol as the main carbon source. This indicated that Cyanothece 51142 employs the atypical alternative citramalate pathway for isoleucine synthesis, with pyruvate and acetyl-CoA as precursors. Utilization of the citramalate pathway was confirmed by an enzyme assay and LC-MS/MS analysis. Furthermore, the genome sequence of Cyanothece 51142 shows that the gene encoding the key enzyme (threonine ammonia-lyase) in the normal isoleucine pathway is missing. Instead, the cce_0248 gene in Cyanothece 51142 exhibits 53 % identity to the gene encoding citramalate synthase (CimA, GSU1798) from Geobacter sulfurreducens. Reverse-transcription PCR indicated that the cce_0248 gene is expressed and its transcriptional level is lower in medium with isoleucine than in isoleucine-free medium. Additionally, a blast search for citramalate synthase and threonine ammonia-lyase implies that this alternative isoleucine synthesis pathway may be present in other cyanobacteria, such as Cyanothece and Synechococcus. This suggests that the pathway is more widespread than originally thought, as previous identifications of the citramalate pathway are limited to mostly anaerobic bacteria or archaea. Furthermore, this discovery opens the possibility that such autrotrophic micro-organisms may be engineered for robust butanol and propanol production from 2-ketobutyrate, which is an intermediate in the isoleucine biosynthesis pathway. PMID:19875435

  20. Cyanobacterial diversity in the phyllosphere of a mangrove forest.

    PubMed

    Rigonato, Janaina; Alvarenga, Danillo Oliveira; Andreote, Fernando Dini; Dias, Armando Cavalcante Franco; Melo, Itamar Soares; Kent, Angela; Fiore, Marli Fátima

    2012-05-01

    The cyanobacterial community colonizing phyllosphere in a well-preserved Brazilian mangrove ecosystem was assessed using cultivation-independent molecular approaches. Leaves of trees that occupy this environment (Rhizophora mangle,Avicennia schaueriana and Laguncularia racemosa) were collected along a transect beginning at the margin of the bay and extending upland. The results demonstrated that the phyllosphere of R. mangle and L. racemosa harbor similar assemblages of cyanobacteria at each point along the transect. A. schaueriana, found only in the coastal portions of the transect, was colonized by assemblages with lower richness than the other trees. However, the results indicated that spatial location was a stronger driver of cyanobacterial community composition than plant species. Distinct cyanobacterial communities were observed at each location along the coast-to-upland transect. Clone library analysis allowed identification of 19 genera of cyanobacteria and demonstrated the presence of several uncultivated taxa. A predominance of sequences affiliated with the orders Nostocales and Oscillatoriales was observed, with a remarkable number of sequences similar to genera Symphyonemopsis/Brasilonema (order Nostocales). The results demonstrated that phyllosphere cyanobacteria in this mangrove forest ecosystem are influenced by environmental conditions as the primary driver at the ecosystem scale, with tree species exerting some effect on community structure at the local scale. PMID:22611551

  1. Genetic diversity in cyanobacterial symbionts of thalloid bryophytes.

    PubMed

    Rikkinen, Jouko; Virtanen, Viivi

    2008-01-01

    Two species of thalloid liverworts, Blasia pusilla and Cavicularia densa, form stable symbioses with nitrogen-fixing cyanobacteria. Both bryophytes promote the persistence of their cyanobacterial associations by producing specialized gemmae, which facilitate the simultaneous dispersal of the host and its nitrogen-fixing symbionts. Here the genetic diversity of cyanobacterial symbionts of Blasia and Cavicularia is examined. The results indicate that the primary symbionts of both bryophytes are closely related and belong to a specific group of symbiotic Nostoc strains. Related strains have previously been reported from hornworts and cycads, and from many terricolous cyanolichens. The evolutionary origins of all these symbioses may trace back to pre-Permian times. While the laboratory strain Nostoc punctiforme PCC 73102 has been widely used in experimental studies of bryophyte-Nostoc associations, sequence-identical cyanobionts have not yet been identified from thalloid liverworts in the field. PMID:18325923

  2. Carotenoids Assist in Cyanobacterial Photosystem II Assembly and Function

    PubMed Central

    Zakar, Tomas; Laczko-Dobos, Hajnalka; Toth, Tunde N.; Gombos, Zoltan

    2016-01-01

    Carotenoids (carotenes and xanthophylls) are ubiquitous constituents of living organisms. They are protective agents against oxidative stresses and serve as modulators of membrane microviscosity. As antioxidants they can protect photosynthetic organisms from free radicals like reactive oxygen species that originate from water splitting, the first step of photosynthesis. We summarize the structural and functional roles of carotenoids in connection with cyanobacterial Photosystem II. Although carotenoids are hydrophobic molecules, their complexes with proteins also allow cytoplasmic localization. In cyanobacterial cells such complexes are called orange carotenoid proteins, and they protect Photosystem II and Photosystem I by preventing their overexcitation through phycobilisomes (PBS). Recently it has been observed that carotenoids are not only required for the proper functioning, but also for the structural stability of PBSs. PMID:27014318

  3. Biosynthesis of gold nanoparticles by the living freshwater diatom Eolimna minima, a species developed in river biofilms.

    PubMed

    Feurtet-Mazel, Agnès; Mornet, Stéphane; Charron, Laëtitia; Mesmer-Dudons, Nathalie; Maury-Brachet, Régine; Baudrimont, Magalie

    2016-03-01

    Testing biotransformation capacities of living aquatic microalgae diatoms to naturally synthetize gold nanoparticles (AuNP) from gold salts and assessing aftereffects on their viability by microscope observations is a great challenge. In this work, a laboratory experiment was conducted, which aimed to observe (i) directly by transmission electronic and light microscopy and (ii) through indirect measurements (UV-visible spectroscopy) the periphytic freshwater diatom Eolimna minima exposed to gold salts. This work revealed the capacity of E. minima to intracellularly biosynthetize AuNP and to tolerate it. AuNP synthesis appears as a mechanism of detoxification to protect diatom from gold salt contamination. We also pointed out the risks associated with the spread of diatoms full of AuNP, through the trophic web of freshwater ecosystems. The preponderant part of the diatoms in natural biofilms associated with their position at the basis of the trophic webs in rivers could then make them responsible for the contamination of their consumers (grazer animals) and consequently for the potential release of AuNP through the entire food web. PMID:25628115

  4. Factors and processes shaping the population structure and distribution of genetic variation across the species range of the freshwater snail radix balthica (Pulmonata, Basommatophora)

    PubMed Central

    2011-01-01

    Background Factors and processes shaping the population structure and spatial distribution of genetic diversity across a species' distribution range are important in determining the range limits. We comprehensively analysed the influence of recurrent and historic factors and processes on the population genetic structure, mating system and the distribution of genetic variability of the pulmonate freshwater snail Radix balthica. This analysis was based on microsatellite variation and mitochondrial haplotypes using Generalised Linear Statistical Modelling in a Model Selection framework. Results Populations of R. balthica were found throughout North-Western Europe with range margins marked either by dispersal barriers or the presence of other Radix taxa. Overall, the population structure was characterised by distance independent passive dispersal mainly along a Southwest-Northeast axis, the absence of isolation-by-distance together with rather isolated and genetically depauperated populations compared to the variation present in the entire species due to strong local drift. A recent, climate driven range expansion explained most of the variance in genetic variation, reducing at least temporarily the genetic variability in this area. Other factors such as geographic marginality and dispersal barriers play only a minor role. Conclusions To our knowledge, such a population structure has rarely been reported before. It might nevertheless be typical for passively dispersed, patchily distributed taxa (e.g. freshwater invertebrates). The strong local drift implied in such a structure is expected to erode genetic variation at both neutral and coding loci and thus probably diminish evolutionary potential. This study shows that the analysis of multiple factors is crucial for the inference of the processes shaping the distribution of genetic variation throughout species ranges. PMID:21599918

  5. Cyanobacterial evolution during the Precambrian

    NASA Astrophysics Data System (ADS)

    Schirrmeister, Bettina E.; Sanchez-Baracaldo, Patricia; Wacey, David

    2016-07-01

    Life on Earth has existed for at least 3.5 billion years. Yet, relatively little is known of its evolution during the first two billion years, due to the scarceness and generally poor preservation of fossilized biological material. Cyanobacteria, formerly known as blue green algae were among the first crown Eubacteria to evolve and for more than 2.5 billion years they have strongly influenced Earth's biosphere. Being the only organism where oxygenic photosynthesis has originated, they have oxygenated Earth's atmosphere and hydrosphere, triggered the evolution of plants -being ancestral to chloroplasts- and enabled the evolution of complex life based on aerobic respiration. Having such a strong impact on early life, one might expect that the evolutionary success of this group may also have triggered further biosphere changes during early Earth history. However, very little is known about the early evolution of this phylum and ongoing debates about cyanobacterial fossils, biomarkers and molecular clock analyses highlight the difficulties in this field of research. Although phylogenomic analyses have provided promising glimpses into the early evolution of cyanobacteria, estimated divergence ages are often very uncertain, because of vague and insufficient tree-calibrations. Results of molecular clock analyses are intrinsically tied to these prior calibration points, hence improving calibrations will enable more precise divergence time estimations. Here we provide a review of previously described Precambrian microfossils, biomarkers and geochemical markers that inform upon the early evolution of cyanobacteria. Future research in micropalaeontology will require novel analyses and imaging techniques to improve taxonomic affiliation of many Precambrian microfossils. Consequently, a better understanding of early cyanobacterial evolution will not only allow for a more specific calibration of cyanobacterial and eubacterial phylogenies, but also provide new dates for the tree

  6. A pair of chiral flavonolignans as novel anti-cyanobacterial allelochemicals derived from barley straw (Hordeum vulgare): characterization and comparison of their anti-cyanobacterial activities.

    PubMed

    Xiao, Xi; Huang, Haomin; Ge, Zhiwei; Rounge, Trine B; Shi, Jiyan; Xu, Xinhua; Li, Ruobing; Chen, Yingxu

    2014-05-01

    The inhibitory effect of barley straw (Hordeum vulgare) on cyanobacteria has been observed in many field and laboratory studies for over 30 years, although the compounds responsible for this anti-cyanobacterial effect have remained unknown. In this study, a pair of chiral flavonolignans were isolated from barley straw extract using a bioassay-guided isolation procedure against Microcystis sp. The structures of the allelopathic compounds were elucidated by NMR (nuclear magnetic resonance) and HPLC-MS (high performance liquid chromatography-mass spectrometry), and turned out to be salcolin A and B. The enantiomers differ in their anti-cyanobacterial abilities. Both enantiomers exhibited inhibitory effects on Microcystis sp., and the EC50 (concentration for 50% of maximal effect) of salcolin A and B were 6.02 × 10(-5) and 9.60 × 10(-5 ) mol l(-1) , respectively. Furthermore, the modes of actions of the enantiomers were investigated and compared at a single cell level by flow cytometry. Salcolin A was found to induce an increase on cyanobacterial intracellular ROS (reactive oxygen species) levels and to inhibit esterase activity, whereas salcolin B caused leakages of cyanobacterial cytoplasms. Thus, salcolin A was more 'algistatic', and salcolin B was more 'algicidal'. This study suggests that salcolin is the key allelochemical in barley straw's inhibitory effect on cyanobacteria and could be used as an agent in the future control of cyanobacterial harmful algae blooms. PMID:24034604

  7. Comparison of Ba/Ca and δOWATER18 as freshwater proxies: A multi-species core-top study on planktonic foraminifera from the vicinity of the Orinoco River mouth

    NASA Astrophysics Data System (ADS)

    Bahr, André; Schönfeld, Joachim; Hoffmann, Julia; Voigt, Silke; Aurahs, Ralf; Kucera, Michal; Flögel, Sascha; Jentzen, Anna; Gerdes, Axel

    2013-12-01

    Past river run-off is an important measure for the continental hydrological cycle and the assessment of freshwater input into the ocean. However, paleosalinity reconstructions applying different proxies in parallel often show offsets between the respective methods. Here, we compare the established foraminiferal Ba/Ca and δOWATER18 salinity proxies for their capability to record the highly seasonal Orinoco freshwater plume in the eastern Caribbean. For this purpose we obtained a data set comprising Ba/Ca and δOWATER18 determined on multiple species of planktonic foraminifera from core tops distributed around the Orinoco River mouth. Our findings indicate that interpretations based on either proxy could lead to different conclusions. In particular, Ba/Ca and δOWATER18 diverge in their spatial distribution due to different governing factors. Apparently, the Orinoco freshwater plume is best tracked by Ba/Ca ratios of G. ruber (pink and sensu lato morphotypes), while δOWATER18 based on the same species is more related to the local precipitation-evaporation balance overprinting the riverine freshwater contribution. Other shallow dwelling species (G. sacculifer, O. universa) show a muted response to the freshwater discharge, most likely due to their ecological and habitat preferences. Extremely high Ba/Ca ratios recorded by G. ruber are attributed to Ba2+-desorption from suspended matter derived from the Orinoco. Samples taken most proximal to the freshwater source do not show pronounced Ba/Ca or δOWATER18 anomalies. Here, the suspension loaded freshwater lid developing during maximum discharge suppresses foraminiferal populations. Both proxies are therefore biased towards dry season conditions at these sites, when surface salinity is only minimally reduced.

  8. Freshwater crabs from eastern Panamá: a new species of Potamocarcinus H. Milne Edwards, 1853, and new records of two little-known species (Crustacea: Decapoda: Pseudothelphusidae, Trichodactylidae).

    PubMed

    Magalhães, Célio; Campos, Martha R; Türkay, Michael

    2013-01-01

    A small collection of freshwater crabs from eastern Panamá revealed a new species of pseudothelphusid crab, Potamocarcinus darienensis n. sp., which is described and illustrated. The new species is characterized by an unusual arrangement of distal processes in the male first gonopod, in which the mesial lobe is folded in a latero-cephalic direction over the apex and the apex is broadened by a rounded protuberance in its caudo-lateral surface, the cephalic surface having a small, conical median cephalic process, and a large, prominent, subtriangular proximal cephalic process. New records of two little-known species described from eastern Panamá, Spirocarcinus garthi (Pretzmann, 1971) (Pseudothelphusidae) and Melocarcinus meekei (Pretzmann, 1968) (Trichodactylidae), are listed and the first gonopod of S. garthi is redescribed. PMID:26146728

  9. Replacement names and nomenclatural comments for problematic species-group names in Europe's Neogene freshwater Gastropoda. Part 2.

    PubMed

    Neubauer, Thomas A; Harzhauser, Mathias; Kroh, Andreas; Elisavet, Georgopoulou; Mandic, Oleg

    2014-01-01

    In the course of a new database project on Miocene to Recent freshwater gastropods of Europe, a great many of primary and secondary homonyms were revealed. Such nomenclatural issues need clarification in order to avoid misunderstandings and wrong statements about geographical distributions and temporal ranges. The following 16 new names are introduced to replace existing homonyms: Theodoxus militaris jurisicpolsakae nom. n., Viviparus stevanovici nom. n., Melanopsis haueri ripanjensis nom. n., Melanopsis wolfgangfischeri nom. n., Micromelania ramacanensis nom. n., Pseudamnicola welterschultesi nom. n., Muellerpalia haszprunari nom. n., Muellerpalia pseudovalvatoides nom. n., Lithoglyphus gozhiki nom. n., Valvata heidemariae willmanni nom. n., Radix macaleti nom. n., Gyraulus okrugljakensis nom. n., Gyraulus rasseri nom. n., Gyraulus vrapceanus nom. n., Planorbarius halavatsi nom. n., and Segmentina mosbachensis nom. n. Additionally, six cases of homonyms are discussed that are not replaced by new names, because they are considered junior synonyms. PMID:25147468

  10. A freshwater species wintering in a brackish environment: Habitat selection and diet of Slavonian grebes in the southern Baltic Sea

    NASA Astrophysics Data System (ADS)

    Sonntag, Nicole; Garthe, Stefan; Adler, Sven

    2009-09-01

    After the breeding season, Slavonian grebes ( Podiceps auritus) leave their freshwater breeding habitats and migrate to wintering grounds in marine or brackish waters. The most important wintering area in northwestern Europe is located in the southern Baltic Sea, with the largest concentrations in the offshore area of the Pommeranian Bight. Analysis of ship-based surveys revealed that the habitat selection of Slavonian grebes in this brackish area is significantly influenced by water depth and bottom sediment type. The grebes prefer shallow waters of 4-14 m depth and occur only over sandy sediments. While the diving depths of endothermic animals is limited due to energetic constraints and thermoregulation, sediment type is regarded to be a proxy for food choice. The diet of Slavonian grebes in the Pomeranian Bight consists mainly of demersal gobies (Gobiidae) that frequently occur over sandy bottom substrates.