Sample records for geometric deformable models

  1. Biomedical image segmentation using geometric deformable models and metaheuristics.

    PubMed

    Mesejo, Pablo; Valsecchi, Andrea; Marrakchi-Kacem, Linda; Cagnoni, Stefano; Damas, Sergio

    2015-07-01

    This paper describes a hybrid level set approach for medical image segmentation. This new geometric deformable model combines region- and edge-based information with the prior shape knowledge introduced using deformable registration. Our proposal consists of two phases: training and test. The former implies the learning of the level set parameters by means of a Genetic Algorithm, while the latter is the proper segmentation, where another metaheuristic, in this case Scatter Search, derives the shape prior. In an experimental comparison, this approach has shown a better performance than a number of state-of-the-art methods when segmenting anatomical structures from different biomedical image modalities. Copyright © 2013 Elsevier Ltd. All rights reserved.

  2. Black hole acoustics in the minimal geometric deformation of a de Laval nozzle

    NASA Astrophysics Data System (ADS)

    da Rocha, Roldão

    2017-05-01

    The correspondence between sound waves, in a de Laval propelling nozzle, and quasinormal modes emitted by brane-world black holes deformed by a 5D bulk Weyl fluid are here explored and scrutinized. The analysis of sound waves patterns in a de Laval nozzle in the laboratory, reciprocally, is here shown to provide relevant data about the 5D bulk Weyl fluid and its on-brane projection, comprised by the minimal geometrically deformed compact stellar distribution on the brane. Acoustic perturbations of the gas fluid flow in the de Laval nozzle are proved to coincide with the quasinormal modes of black holes solutions deformed by the 5D Weyl fluid, in the geometric deformation procedure. Hence, in a phenomenological Eötvös-Friedmann fluid brane-world model, the realistic shape of a de Laval nozzle is derived and its consequences studied.

  3. Iris-based medical analysis by geometric deformation features.

    PubMed

    Ma, Lin; Zhang, D; Li, Naimin; Cai, Yan; Zuo, Wangmeng; Wang, Kuanguan

    2013-01-01

    Iris analysis studies the relationship between human health and changes in the anatomy of the iris. Apart from the fact that iris recognition focuses on modeling the overall structure of the iris, iris diagnosis emphasizes the detecting and analyzing of local variations in the characteristics of irises. This paper focuses on studying the geometrical structure changes in irises that are caused by gastrointestinal diseases, and on measuring the observable deformations in the geometrical structures of irises that are related to roundness, diameter and other geometric forms of the pupil and the collarette. Pupil and collarette based features are defined and extracted. A series of experiments are implemented on our experimental pathological iris database, including manual clustering of both normal and pathological iris images, manual classification by non-specialists, manual classification by individuals with a medical background, classification ability verification for the proposed features, and disease recognition by applying the proposed features. The results prove the effectiveness and clinical diagnostic significance of the proposed features and a reliable recognition performance for automatic disease diagnosis. Our research results offer a novel systematic perspective for iridology studies and promote the progress of both theoretical and practical work in iris diagnosis.

  4. Tapping-mode AFM study of tip-induced polymer deformation under geometrical confinement.

    PubMed

    Zhang, Hong; Honda, Yukio; Takeoka, Shinji

    2013-02-05

    The morphological stability of polymer films is critically important to their application as functional materials. The deformation of polymer surfaces on the nanoscale may be significantly influenced by geometrical confinement. Herein, we constructed a mechanically heterogeneous polymer surface by phase separation in a thin polymer film and investigated the deformation behavior of its nanostructure (∼30 nm thickness and ∼100 nm average diameter) with tapping-mode atomic force microscopy. By changing different scan parameters, we could induce deformation localized to the nanostructure in a controllable manner. A quantity called the deformation index is defined and shown to be correlated to energy dissipation by tip-sample interaction. We clarified that the plastic deformation of a polymer on the nanoscale is energy-dependent and is related to the glass-to-rubber transition. The mobility of polymer chains beneath the tapping tip is enhanced, and in the corresponding region a rubberlike deformation with the lateral motion of the tip is performed. The method we developed can provide insight into the geometrical confinement effects on polymer behavior.

  5. Deformation Prediction and Geometrical Modeling of Head and Neck Cancer Tumor: A Data Mining Approach

    NASA Astrophysics Data System (ADS)

    Azimi, Maryam

    Radiation therapy has been used in the treatment of cancer tumors for several years and many cancer patients receive radiotherapy. It may be used as primary therapy or with a combination of surgery or other kinds of therapy such as chemotherapy, hormone therapy or some mixture of the three. The treatment objective is to destroy cancer cells or shrink the tumor by planning an adequate radiation dose to the desired target without damaging the normal tissues. By using the pre-treatment Computer Tomography (CT) images, most of the radiotherapy planning systems design the target and assume that the size of the tumor will not change throughout the treatment course, which takes 5 to 7 weeks. Based on this assumption, the total amount of radiation is planned and fractionated for the daily dose required to be delivered to the patient's body. However, this assumption is flawed because the patients receiving radiotherapy have marked changes in tumor geometry during the treatment period. Therefore, there is a critical need to understand the changes of the tumor shape and size over time during the course of radiotherapy in order to prevent significant effects of inaccuracy in the planning. In this research, a methodology is proposed in order to monitor and predict daily (fraction day) tumor volume and surface changes of head and neck cancer tumors during the entire treatment period. In the proposed method, geometrical modeling and data mining techniques will be used rather than repetitive CT scans data to predict the tumor deformation for radiation planning. Clinical patient data were obtained from the University of Texas-MD Anderson Cancer Center (MDACC). In the first step, by using CT scan data, the tumor's progressive geometric changes during the treatment period are quantified. The next step relates to using regression analysis in order to develop predictive models for tumor geometry based on the geometric analysis results and the patients' selected attributes (age, weight

  6. Curved Displacement Transfer Functions for Geometric Nonlinear Large Deformation Structure Shape Predictions

    NASA Technical Reports Server (NTRS)

    Ko, William L.; Fleischer, Van Tran; Lung, Shun-Fat

    2017-01-01

    For shape predictions of structures under large geometrically nonlinear deformations, Curved Displacement Transfer Functions were formulated based on a curved displacement, traced by a material point from the undeformed position to deformed position. The embedded beam (depth-wise cross section of a structure along a surface strain-sensing line) was discretized into multiple small domains, with domain junctures matching the strain-sensing stations. Thus, the surface strain distribution could be described with a piecewise linear or a piecewise nonlinear function. The discretization approach enabled piecewise integrations of the embedded-beam curvature equations to yield the Curved Displacement Transfer Functions, expressed in terms of embedded beam geometrical parameters and surface strains. By entering the surface strain data into the Displacement Transfer Functions, deflections along each embedded beam can be calculated at multiple points for mapping the overall structural deformed shapes. Finite-element linear and nonlinear analyses of a tapered cantilever tubular beam were performed to generate linear and nonlinear surface strains and the associated deflections to be used for validation. The shape prediction accuracies were then determined by comparing the theoretical deflections with the finiteelement- generated deflections. The results show that the newly developed Curved Displacement Transfer Functions are very accurate for shape predictions of structures under large geometrically nonlinear deformations.

  7. Geometric Metamorphosis

    PubMed Central

    Niethammer, Marc; Hart, Gabriel L.; Pace, Danielle F.; Vespa, Paul M.; Irimia, Andrei; Van Horn, John D.; Aylward, Stephen R.

    2013-01-01

    Standard image registration methods do not account for changes in image appearance. Hence, metamorphosis approaches have been developed which jointly estimate a space deformation and a change in image appearance to construct a spatio-temporal trajectory smoothly transforming a source to a target image. For standard metamorphosis, geometric changes are not explicitly modeled. We propose a geometric metamorphosis formulation, which explains changes in image appearance by a global deformation, a deformation of a geometric model, and an image composition model. This work is motivated by the clinical challenge of predicting the long-term effects of traumatic brain injuries based on time-series images. This work is also applicable to the quantification of tumor progression (e.g., estimating its infiltrating and displacing components) and predicting chronic blood perfusion changes after stroke. We demonstrate the utility of the method using simulated data as well as scans from a clinical traumatic brain injury patient. PMID:21995083

  8. Postbuckling analysis of shear deformable composite flat panels taking into account geometrical imperfections

    NASA Technical Reports Server (NTRS)

    Librescu, L.; Stein, M.

    1990-01-01

    The effects of initial geometrical imperfections on the postbuckling response of flat laminated composite panels to uniaxial and biaxial compressive loading are investigated analytically. The derivation of the mathematical model on the basis of first-order transverse shear deformation theory is outlined, and numerical results for perfect and imperfect, single-layer and three-layer square plates with free-free, clamped-clamped, or free-clamped edges are presented in graphs and briefly characterized. The present approach is shown to be more accurate than analyses based on the classical Kirchhoff plate model.

  9. TH-CD-206-08: An Anthropopathic Deformable Phantom for Geometric and Dose Accumulation Accuracy Validation of Deformable Image Registration

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liao, Y; Chen, H; Chen, J

    2016-06-15

    Purpose: To design and construct a three-dimensional (3D) anthropopathic abdominal phantom for evaluating deformable image registration (DIR) accuracy on images and dose deformation in adaptive radiation therapy (ART). Method: Organ moulds, including liver, kidney, spleen, stomach, vertebra and two metastasis tumors, are 3D printed using the contours from an ovarian cancer patient. The organ moulds are molded with deformable gels that made of different mixtures of polyvinyl chloride (PVC) and the softener dioctyl terephthalate. Gels with different densities are obtained by a polynomial fitting curve which describes the relation between the CT number and PVC-softener blending ratio. The rigid vertebrasmore » are constructed by moulding with white cement. The final abdominal phantom is assembled by arranging all the fabricated organs inside a hollow dummy according to their anatomies and sealed with deformable gel with averaged CT number of muscle and fat. Geometric and dosimetric landmarks are embedded inside the phantom for spatial accuracy and dose accumulation accuracy studies. Three DIR algorithms available in the open source DIR toolkit-DIRART, including the Demons, the Horn-Schunck and Lucas-Kanade method and the Level-Set Motion method, are tested using the constructed phantom. Results: Viscoelastic behavior is observed in the constructed deformable gel, which serves as an ideal material for the deformable phantom. The constructed abdominal phantom consists of highly realistic anatomy and the fabricated organs inside have close CT number to its reference patient. DIR accuracy studies conducted on the constructed phantom using three DIR approaches indicate that geometric accuracy of a DIR algorithm has achieved does not guarantee accuracy in dose accumulation. Conclusions: We have designed and constructed an anthropopathic abdominal deformable phantom with satisfactory elastic property, realistic organ density and anatomy. This physical phantom is recyclable

  10. Non-geometric fluxes, quasi-Hopf twist deformations, and nonassociative quantum mechanics

    NASA Astrophysics Data System (ADS)

    Mylonas, Dionysios; Schupp, Peter; Szabo, Richard J.

    2014-12-01

    We analyse the symmetries underlying nonassociative deformations of geometry in non-geometric R-flux compactifications which arise via T-duality from closed strings with constant geometric fluxes. Starting from the non-abelian Lie algebra of translations and Bopp shifts in phase space, together with a suitable cochain twist, we construct the quasi-Hopf algebra of symmetries that deforms the algebra of functions and the exterior differential calculus in the phase space description of nonassociative R-space. In this setting, nonassociativity is characterised by the associator 3-cocycle which controls non-coassociativity of the quasi-Hopf algebra. We use abelian 2-cocycle twists to construct maps between the dynamical nonassociative star product and a family of associative star products parametrized by constant momentum surfaces in phase space. We define a suitable integration on these nonassociative spaces and find that the usual cyclicity of associative noncommutative deformations is replaced by weaker notions of 2-cyclicity and 3-cyclicity. Using this star product quantization on phase space together with 3-cyclicity, we formulate a consistent version of nonassociative quantum mechanics, in which we calculate the expectation values of area and volume operators, and find coarse-graining of the string background due to the R-flux.

  11. A discrete element model for the investigation of the geometrically nonlinear behaviour of solids

    NASA Astrophysics Data System (ADS)

    Ockelmann, Felix; Dinkler, Dieter

    2018-07-01

    A three-dimensional discrete element model for elastic solids with large deformations is presented. Therefore, an discontinuum approach is made for solids. The properties of elastic material are transferred analytically into the parameters of a discrete element model. A new and improved octahedron gap-filled face-centred cubic close packing of spheres is split into unit cells, to determine the parameters of the discrete element model. The symmetrical unit cells allow a model with equal shear components in each contact plane and fully isotropic behaviour for Poisson's ratio above 0. To validate and show the broad field of applications of the new model, the pin-pin Euler elastica is presented and investigated. The thin and sensitive structure tends to undergo large deformations and rotations with a highly geometrically nonlinear behaviour. This behaviour of the elastica can be modelled and is compared to reference solutions. Afterwards, an improved more realistic simulation of the elastica is presented which softens secondary buckling phenomena. The model is capable of simulating solids with small strains but large deformations and a strongly geometrically nonlinear behaviour, taking the shear stiffness of the material into account correctly.

  12. Description of the Hexadecapole Deformation Parameter in the sdg Interacting Boson Model

    NASA Astrophysics Data System (ADS)

    Liu, Yu-xin; Sun, Di; Wang, Jia-jun; Han, Qi-zhi

    1998-04-01

    The hexadecapole deformation parameter β4 of the rare-earth and actinide nuclei is investigated in the framework of the sdg interacing boson model. An explicit relation between the geometric hexadecapole deformation parameter β4 and the intrinsic deformation parameters epsilon4, epsilon2 are obtained. The deformation parameters β4 of the rare-earths and actinides are determined without any free parameter. The calculated results agree with experimental data well. It also shows that the SU(5) limit of the sdg interacting boson model can describe the β4 systematics as well as the SU(3) limit.

  13. Automatic Cell Segmentation in Fluorescence Images of Confluent Cell Monolayers Using Multi-object Geometric Deformable Model.

    PubMed

    Yang, Zhen; Bogovic, John A; Carass, Aaron; Ye, Mao; Searson, Peter C; Prince, Jerry L

    2013-03-13

    With the rapid development of microscopy for cell imaging, there is a strong and growing demand for image analysis software to quantitatively study cell morphology. Automatic cell segmentation is an important step in image analysis. Despite substantial progress, there is still a need to improve the accuracy, efficiency, and adaptability to different cell morphologies. In this paper, we propose a fully automatic method for segmenting cells in fluorescence images of confluent cell monolayers. This method addresses several challenges through a combination of ideas. 1) It realizes a fully automatic segmentation process by first detecting the cell nuclei as initial seeds and then using a multi-object geometric deformable model (MGDM) for final segmentation. 2) To deal with different defects in the fluorescence images, the cell junctions are enhanced by applying an order-statistic filter and principal curvature based image operator. 3) The final segmentation using MGDM promotes robust and accurate segmentation results, and guarantees no overlaps and gaps between neighboring cells. The automatic segmentation results are compared with manually delineated cells, and the average Dice coefficient over all distinguishable cells is 0.88.

  14. 3D printed, bio-inspired prototypes and analytical models for structured suture interfaces with geometrically-tuned deformation and failure behavior

    NASA Astrophysics Data System (ADS)

    Lin, Erica; Li, Yaning; Ortiz, Christine; Boyce, Mary C.

    2014-12-01

    Geometrically structured interfaces in nature possess enhanced, and often surprising, mechanical properties, and provide inspiration for materials design. This paper investigates the mechanics of deformation and failure mechanisms of suture interface designs through analytical models and experiments on 3D printed polymer physical prototypes. Suture waveforms with generalized trapezoidal geometries (trapezoidal, rectangular, anti-trapezoidal, and triangular) are studied and characterized by several important geometric parameters: the presence or absence of a bonded tip region, the tip angle, and the geometry. It is shown that a wide range (in some cases as great as an order of magnitude) in stiffness, strength, and toughness is achievable dependent on tip bonding, tip angle, and geometry. Suture interfaces with a bonded tip region exhibit a higher initial stiffness due to the greater load bearing by the skeletal teeth, a double peak in the stress-strain curve corresponding to the failure of the bonded tip and the failure of the slanted interface region or tooth, respectively, and an additional failure and toughening mechanism due to the failure of the bonded tip. Anti-trapezoidal geometries promote the greatest amplification of properties for suture interfaces with a bonded tip due the large tip interface area. The tip angle and geometry govern the stress distributions in the teeth and the ratio of normal to shear stresses in the interfacial layers, which together determine the failure mechanism of the interface and/or the teeth. Rectangular suture interfaces fail by simple shearing of the interfaces. Trapezoidal and triangular suture interfaces fail by a combination of shear and tensile normal stresses in the interface, leading to plastic deformation, cavitation events, and subsequent stretching of interface ligaments with mostly elastic deformation in the teeth. Anti-trapezoidal suture interfaces with small tip angles have high stress concentrations in the teeth

  15. Global geometric torsion estimation in adolescent idiopathic scoliosis.

    PubMed

    Kadoury, Samuel; Shen, Jesse; Parent, Stefan

    2014-04-01

    Several attempts have been made to measure geometrical torsion in adolescent idiopathic scoliosis (AIS) and quantify the three-dimensional (3D) deformation of the spine. However, these approaches are sensitive to imprecisions in the 3D modeling of the anatomy and can only capture the effect locally at the vertebrae, ignoring the global effect at the regional level and thus have never been widely used to follow the progression of a deformity. The goal of this work was to evaluate the relevance of a novel geometric torsion descriptor based on a parametric modeling of the spinal curve as a 3D index of scoliosis. First, an image-based approach anchored on prior statistical distributions is used to reconstruct the spine in 3D from biplanar X-rays. Geometric torsion measuring the twisting effect of the spine is then estimated using a technique that approximates local arc-lengths with parametric curve fitting centered at the neutral vertebra in different spinal regions. We first evaluated the method with simulated experiments, demonstrating the method's robustness toward added noise and reconstruction inaccuracies. A pilot study involving 65 scoliotic patients exhibiting different types of deformities was also conducted. Results show the method is able to discriminate between different types of deformation based on this novel 3D index evaluated in the main thoracic and thoracolumbar/lumbar regions. This demonstrates that geometric torsion modeled by parametric spinal curve fitting is a robust tool that can be used to quantify the 3D deformation of AIS and possibly exploited as an index to classify the 3D shape.

  16. Respiratory-induced 3D deformations of the renal arteries quantified with geometric modeling during inspiration and expiration breath-holds of magnetic resonance angiography.

    PubMed

    Suh, Ga-Young; Choi, Gilwoo; Draney, Mary T; Herfkens, Robert J; Dalman, Ronald L; Cheng, Christopher P

    2013-12-01

    To quantify renal artery deformation due to respiration using magnetic resonance (MR) image-based geometric analysis. Five males were imaged with contrast-enhanced MR angiography during inspiratory and expiratory breath-holds. From 3D models of the abdominal aorta, left and right renal arteries (LRA and RRA), we quantified branching angle, curvature, peak curve angle, axial length, and locations of branch points. With expiration, maximum curvature changes were 0.054 ± 0.025 mm(-1) (P < 0.01), and curve angle at the most proximal curvature peak increased by 8.0 ± 4.5° (P < 0.05) in the LRA. Changes in maximum curvature and curve angles were not significant in the RRA. The first renal bifurcation point translated superiorly and posteriorly by 9.7 ± 3.6 mm (P < 0.005) and 3.5 ± 2.1 mm (P < 0.05), respectively, in the LRA, and 10.8 ± 6.1 mm (P < 0.05) and 3.6 ± 2.5 mm (P < 0.05), respectively, in the RRA. Changes in branching angle, axial length, and renal ostia locations were not significant. The LRA and RRA deformed and translated significantly. Greater deformation of the LRA as compared to the RRA may be due to asymmetric anatomy and mechanical support by the inferior vena cava. The presented methodology can extend to quantification of deformation of diseased and stented arteries to help renal artery implant development. Copyright © 2013 Wiley Periodicals, Inc.

  17. Dosimetric treatment course simulation based on a statistical model of deformable organ motion

    NASA Astrophysics Data System (ADS)

    Söhn, M.; Sobotta, B.; Alber, M.

    2012-06-01

    We present a method of modeling dosimetric consequences of organ deformation and correlated motion of adjacent organ structures in radiotherapy. Based on a few organ geometry samples and the respective deformation fields as determined by deformable registration, principal component analysis (PCA) is used to create a low-dimensional parametric statistical organ deformation model (Söhn et al 2005 Phys. Med. Biol. 50 5893-908). PCA determines the most important geometric variability in terms of eigenmodes, which represent 3D vector fields of correlated organ deformations around the mean geometry. Weighted sums of a few dominating eigenmodes can be used to simulate synthetic geometries, which are statistically meaningful inter- and extrapolations of the input geometries, and predict their probability of occurrence. We present the use of PCA as a versatile treatment simulation tool, which allows comprehensive dosimetric assessment of the detrimental effects that deformable geometric uncertainties can have on a planned dose distribution. For this, a set of random synthetic geometries is generated by a PCA model for each simulated treatment course, and the dose of a given treatment plan is accumulated in the moving tissue elements via dose warping. This enables the calculation of average voxel doses, local dose variability, dose-volume histogram uncertainties, marginal as well as joint probability distributions of organ equivalent uniform doses and thus of TCP and NTCP, and other dosimetric and biologic endpoints. The method is applied to the example of deformable motion of prostate/bladder/rectum in prostate IMRT. Applications include dosimetric assessment of the adequacy of margin recipes, adaptation schemes, etc, as well as prospective ‘virtual’ evaluation of the possible benefits of new radiotherapy schemes.

  18. Dosimetric treatment course simulation based on a statistical model of deformable organ motion.

    PubMed

    Söhn, M; Sobotta, B; Alber, M

    2012-06-21

    We present a method of modeling dosimetric consequences of organ deformation and correlated motion of adjacent organ structures in radiotherapy. Based on a few organ geometry samples and the respective deformation fields as determined by deformable registration, principal component analysis (PCA) is used to create a low-dimensional parametric statistical organ deformation model (Söhn et al 2005 Phys. Med. Biol. 50 5893-908). PCA determines the most important geometric variability in terms of eigenmodes, which represent 3D vector fields of correlated organ deformations around the mean geometry. Weighted sums of a few dominating eigenmodes can be used to simulate synthetic geometries, which are statistically meaningful inter- and extrapolations of the input geometries, and predict their probability of occurrence. We present the use of PCA as a versatile treatment simulation tool, which allows comprehensive dosimetric assessment of the detrimental effects that deformable geometric uncertainties can have on a planned dose distribution. For this, a set of random synthetic geometries is generated by a PCA model for each simulated treatment course, and the dose of a given treatment plan is accumulated in the moving tissue elements via dose warping. This enables the calculation of average voxel doses, local dose variability, dose-volume histogram uncertainties, marginal as well as joint probability distributions of organ equivalent uniform doses and thus of TCP and NTCP, and other dosimetric and biologic endpoints. The method is applied to the example of deformable motion of prostate/bladder/rectum in prostate IMRT. Applications include dosimetric assessment of the adequacy of margin recipes, adaptation schemes, etc, as well as prospective 'virtual' evaluation of the possible benefits of new radiotherapy schemes.

  19. A simulation model for analysing brain structure deformations.

    PubMed

    Di Bona, Sergio; Lutzemberger, Ludovico; Salvetti, Ovidio

    2003-12-21

    Recent developments of medical software applications--from the simulation to the planning of surgical operations--have revealed the need for modelling human tissues and organs, not only from a geometric point of view but also from a physical one, i.e. soft tissues, rigid body, viscoelasticity, etc. This has given rise to the term 'deformable objects', which refers to objects with a morphology, a physical and a mechanical behaviour of their own and that reflects their natural properties. In this paper, we propose a model, based upon physical laws, suitable for the realistic manipulation of geometric reconstructions of volumetric data taken from MR and CT scans. In particular, a physically based model of the brain is presented that is able to simulate the evolution of different nature pathological intra-cranial phenomena such as haemorrhages, neoplasm, haematoma, etc and to describe the consequences that are caused by their volume expansions and the influences they have on the anatomical and neuro-functional structures of the brain.

  20. Pragmatic geometric model evaluation

    NASA Astrophysics Data System (ADS)

    Pamer, Robert

    2015-04-01

    Quantification of subsurface model reliability is mathematically and technically demanding as there are many different sources of uncertainty and some of the factors can be assessed merely in a subjective way. For many practical applications in industry or risk assessment (e. g. geothermal drilling) a quantitative estimation of possible geometric variations in depth unit is preferred over relative numbers because of cost calculations for different scenarios. The talk gives an overview of several factors that affect the geometry of structural subsurface models that are based upon typical geological survey organization (GSO) data like geological maps, borehole data and conceptually driven construction of subsurface elements (e. g. fault network). Within the context of the trans-European project "GeoMol" uncertainty analysis has to be very pragmatic also because of different data rights, data policies and modelling software between the project partners. In a case study a two-step evaluation methodology for geometric subsurface model uncertainty is being developed. In a first step several models of the same volume of interest have been calculated by omitting successively more and more input data types (seismic constraints, fault network, outcrop data). The positions of the various horizon surfaces are then compared. The procedure is equivalent to comparing data of various levels of detail and therefore structural complexity. This gives a measure of the structural significance of each data set in space and as a consequence areas of geometric complexity are identified. These areas are usually very data sensitive hence geometric variability in between individual data points in these areas is higher than in areas of low structural complexity. Instead of calculating a multitude of different models by varying some input data or parameters as it is done by Monte-Carlo-simulations, the aim of the second step of the evaluation procedure (which is part of the ongoing work) is to

  1. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach.

    PubMed

    Arrieta, Jorge; Cartwright, Julyan H E; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number--in an inertialess environment--is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the "belly phase," peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing.

  2. Geometric Mixing, Peristalsis, and the Geometric Phase of the Stomach

    PubMed Central

    Arrieta, Jorge; Cartwright, Julyan H. E.; Gouillart, Emmanuelle; Piro, Nicolas; Piro, Oreste; Tuval, Idan

    2015-01-01

    Mixing fluid in a container at low Reynolds number— in an inertialess environment—is not a trivial task. Reciprocating motions merely lead to cycles of mixing and unmixing, so continuous rotation, as used in many technological applications, would appear to be necessary. However, there is another solution: movement of the walls in a cyclical fashion to introduce a geometric phase. We show using journal-bearing flow as a model that such geometric mixing is a general tool for using deformable boundaries that return to the same position to mix fluid at low Reynolds number. We then simulate a biological example: we show that mixing in the stomach functions because of the “belly phase,” peristaltic movement of the walls in a cyclical fashion introduces a geometric phase that avoids unmixing. PMID:26154384

  3. Measurement of deformations of models in a wind tunnel

    NASA Astrophysics Data System (ADS)

    Charpin, F.; Armand, C.; Selvaggini, R.

    Techniques used at the ONERA Modane Center to monitor geometric variations in scale-models in wind tunnel trials are described. The methods include: photography of reflections from mirrors embedded in the model surface; laser-based torsiometry with polarized mirrors embedded in the model surface; predictions of the deformations using numerical codes for the model surface mechanical characteristics and the measured surface stresses; and, use of an optical detector to monitor the position of luminous fiber optic sources emitting from the model surfaces. The data enhance the confidence that the wind tunnel aerodynamic data will correspond with the in-flight performance of full scale flight surfaces.

  4. Nonlinear Geometric Effects in Mechanical Bistable Morphing Structures

    NASA Astrophysics Data System (ADS)

    Chen, Zi; Guo, Qiaohang; Majidi, Carmel; Chen, Wenzhe; Srolovitz, David J.; Haataja, Mikko P.

    2012-09-01

    Bistable structures associated with nonlinear deformation behavior, exemplified by the Venus flytrap and slap bracelet, can switch between different functional shapes upon actuation. Despite numerous efforts in modeling such large deformation behavior of shells, the roles of mechanical and nonlinear geometric effects on bistability remain elusive. We demonstrate, through both theoretical analysis and tabletop experiments, that two dimensionless parameters control bistability. Our work classifies the conditions for bistability, and extends the large deformation theory of plates and shells.

  5. Foldover-free shape deformation for biomedicine.

    PubMed

    Yu, Hongchuan; Zhang, Jian J; Lee, Tong-Yee

    2014-04-01

    Shape deformation as a fundamental geometric operation underpins a wide range of applications, from geometric modelling, medical imaging to biomechanics. In medical imaging, for example, to quantify the difference between two corresponding images, 2D or 3D, one needs to find the deformation between both images. However, such deformations, particularly deforming complex volume datasets, are prone to the problem of foldover, i.e. during deformation, the required property of one-to-one mapping no longer holds for some points. Despite numerous research efforts, the construction of a mathematically robust foldover-free solution subject to positional constraints remains open. In this paper, we address this challenge by developing a radial basis function-based deformation method. In particular we formulate an effective iterative mechanism which ensures the foldover-free property is satisfied all the time. The experimental results suggest that the resulting deformations meet the internal positional constraints. In addition to radial basis functions, this iterative mechanism can also be incorporated into other deformation approaches, e.g. B-spline based FFDs, to develop different deformable approaches for various applications. Crown Copyright © 2013. Published by Elsevier Inc. All rights reserved.

  6. Beta functions in Chirally deformed supersymmetric sigma models in two dimensions

    NASA Astrophysics Data System (ADS)

    Vainshtein, Arkady

    2016-10-01

    We study two-dimensional sigma models where the chiral deformation diminished the original 𝒩 = (2, 2) supersymmetry to the chiral one, 𝒩 = (0, 2). Such heterotic models were discovered previously on the world sheet of non-Abelian stringy solitons supported by certain four-dimensional 𝒩 = 1 theories. We study geometric aspects and holomorphic properties of these models, and derive a number of exact expressions for the β functions in terms of the anomalous dimensions analogous to the NSVZ β function in four-dimensional Yang-Mills. Instanton calculus provides a straightforward method for the derivation.

  7. Beta Functions in Chirally Deformed Supersymmetric Sigma Models in Two Dimensions

    NASA Astrophysics Data System (ADS)

    Vainshtein, Arkady

    We study two-dimensional sigma models where the chiral deformation diminished the original 𝒩 =(2, 2) supersymmetry to the chiral one, 𝒩 =(0, 2). Such heterotic models were discovered previously on the world sheet of non-Abelian stringy solitons supported by certain four-dimensional 𝒩 = 1 theories. We study geometric aspects and holomorphic properties of these models, and derive a number of exact expressions for the β functions in terms of the anomalous dimensions analogous to the NSVZ β function in four-dimensional Yang-Mills. Instanton calculus provides a straightforward method for the derivation.

  8. Models of determining deformations

    NASA Astrophysics Data System (ADS)

    Gladilin, V. N.

    2016-12-01

    In recent years, a lot of functions designed to determine deformation values that occur mostly as a result of settlement of structures and industrial equipment. Some authors suggest such advanced mathematical functions approximating deformations as general methods for the determination of deformations. The article describes models of deformations as physical processes. When comparing static, cinematic and dynamic models, it was found that the dynamic model reflects the deformation of structures and industrial equipment most reliably.

  9. A novel scheme for automatic nonrigid image registration using deformation invariant feature and geometric constraint

    NASA Astrophysics Data System (ADS)

    Deng, Zhipeng; Lei, Lin; Zhou, Shilin

    2015-10-01

    Automatic image registration is a vital yet challenging task, particularly for non-rigid deformation images which are more complicated and common in remote sensing images, such as distorted UAV (unmanned aerial vehicle) images or scanning imaging images caused by flutter. Traditional non-rigid image registration methods are based on the correctly matched corresponding landmarks, which usually needs artificial markers. It is a rather challenging task to locate the accurate position of the points and get accurate homonymy point sets. In this paper, we proposed an automatic non-rigid image registration algorithm which mainly consists of three steps: To begin with, we introduce an automatic feature point extraction method based on non-linear scale space and uniform distribution strategy to extract the points which are uniform distributed along the edge of the image. Next, we propose a hybrid point matching algorithm using DaLI (Deformation and Light Invariant) descriptor and local affine invariant geometric constraint based on triangulation which is constructed by K-nearest neighbor algorithm. Based on the accurate homonymy point sets, the two images are registrated by the model of TPS (Thin Plate Spline). Our method is demonstrated by three deliberately designed experiments. The first two experiments are designed to evaluate the distribution of point set and the correctly matching rate on synthetic data and real data respectively. The last experiment is designed on the non-rigid deformation remote sensing images and the three experimental results demonstrate the accuracy, robustness, and efficiency of the proposed algorithm compared with other traditional methods.

  10. A dislocation-based, strain–gradient–plasticity strengthening model for deformation processed metal–metal composites

    DOE PAGES

    Tian, Liang; Russell, Alan; Anderson, Iver

    2014-01-03

    Deformation processed metal–metal composites (DMMCs) are high-strength, high-electrical conductivity composites developed by severe plastic deformation of two ductile metal phases. The extraordinarily high strength of DMMCs is underestimated using the rule of mixture (or volumetric weighted average) of conventionally work-hardened metals. A dislocation-density-based, strain–gradient–plasticity model is proposed to relate the strain-gradient effect with the geometrically necessary dislocations emanating from the interface to better predict the strength of DMMCs. The model prediction was compared with our experimental findings of Cu–Nb, Cu–Ta, and Al–Ti DMMC systems to verify the applicability of the new model. The results show that this model predicts themore » strength of DMMCs better than the rule-of-mixture model. The strain-gradient effect, responsible for the exceptionally high strength of heavily cold worked DMMCs, is dominant at large deformation strain since its characteristic microstructure length is comparable with the intrinsic material length.« less

  11. Interactive collision detection for deformable models using streaming AABBs.

    PubMed

    Zhang, Xinyu; Kim, Young J

    2007-01-01

    We present an interactive and accurate collision detection algorithm for deformable, polygonal objects based on the streaming computational model. Our algorithm can detect all possible pairwise primitive-level intersections between two severely deforming models at highly interactive rates. In our streaming computational model, we consider a set of axis aligned bounding boxes (AABBs) that bound each of the given deformable objects as an input stream and perform massively-parallel pairwise, overlapping tests onto the incoming streams. As a result, we are able to prevent performance stalls in the streaming pipeline that can be caused by expensive indexing mechanism required by bounding volume hierarchy-based streaming algorithms. At runtime, as the underlying models deform over time, we employ a novel, streaming algorithm to update the geometric changes in the AABB streams. Moreover, in order to get only the computed result (i.e., collision results between AABBs) without reading back the entire output streams, we propose a streaming en/decoding strategy that can be performed in a hierarchical fashion. After determining overlapped AABBs, we perform a primitive-level (e.g., triangle) intersection checking on a serial computational model such as CPUs. We implemented the entire pipeline of our algorithm using off-the-shelf graphics processors (GPUs), such as nVIDIA GeForce 7800 GTX, for streaming computations, and Intel Dual Core 3.4G processors for serial computations. We benchmarked our algorithm with different models of varying complexities, ranging from 15K up to 50K triangles, under various deformation motions, and the timings were obtained as 30 approximately 100 FPS depending on the complexity of models and their relative configurations. Finally, we made comparisons with a well-known GPU-based collision detection algorithm, CULLIDE [4] and observed about three times performance improvement over the earlier approach. We also made comparisons with a SW-based AABB

  12. Microstructure based hygromechanical modelling of deformation of fruit tissue

    NASA Astrophysics Data System (ADS)

    Abera, M. K.; Wang, Z.; Verboven, P.; Nicolai, B.

    2017-10-01

    Quality parameters such as firmness and susceptibility to mechanical damage are affected by the mechanical properties of fruit tissue. Fruit tissue is composed of turgid cells that keep cell walls under tension, and intercellular gas spaces where cell walls of neighboring cells have separated. How the structure and properties of these complex microstructures are affecting tissue mechanics is difficult to unravel experimentally. In this contribution, a modelling methodology is presented to calculate the deformation of apple fruit tissue affected by differences in structure and properties of cells and cell walls. The model can be used to perform compression experiments in silico using a hygromechanical model that computes the stress development and water loss during tissue deformation, much like in an actual compression test. The advantage of the model is that properties and structure can be changed to test the influence on the mechanical deformation process. The effect of microstructure, turgor pressure, cell membrane permeability, wall thickness and damping) on the compressibility of the tissue was simulated. Increasing the turgor pressure and thickness of the cell walls results in increased compression resistance of apple tissue increases, as do decreasing cell size and porosity. Geometric variability of the microstructure of tissues plays a major role, affecting results more than other model parameters. Different fruit cultivars were compared, and it was demonstrated, that microstructure variations within a cultivar are so large that interpretation of cultivar-specific effects is difficult.

  13. Distributed and Localized Deformation Along the Lebanese Restraining Bend from Geomorphic Observations and Modeling

    NASA Astrophysics Data System (ADS)

    Goren, L.; Castelltort, S.; Klinger, Y.

    2014-12-01

    The Dead Sea Fault System changes its orientation across Lebanon and forms a restraining bend. The oblique deformation along the Lebanese restraining bend is characterized by a complex suite of tectonic structures, among which, the Yammouneh Fault (YF), is believed to be the main strand that relays deformation from the southern section to the northern section of the Dead Sea Fault System. However, uncertainties regarding slip rates and strain partitioning in Lebanon still prevail. Here, we use morphometric analysis together with analytical and numerical models to constrain rates and modes of distributed and localized deformation along the Lebanese restraining bend.The rivers that drain the western flank of Mount Lebanon show a consistent counterclockwise rotation with respect to an expected orogen perpendicular orientation. Moreover, a pattern of divide disequilibrium in between these rivers emerges from an application of the χ mapping technique, which aims at estimating the degree of geometrical and topological disequilibrium in river networks. These geometrical patterns are compatible with simulation results using a landscape evolution model, which imposes a distributed velocity field along a domain that represents the western flank of Mount Lebanon. We further develop an analytical model that relates the river orientation to a set of kinematic parameters that represents a combined pure and simple shear strain field, and we find the parameters that best explain the present orientation of the western Lebanon rivers. Our results indicate that distributed deformation to the west of the YF takes as much as 30% of the relative Arabia-Sinai plate velocity since the late Miocene, and that the average slip rate along the YF during the same time interval has been 3.8-4.4 mm/yr. The theoretical model can further explain the inferred rotation from Paleomagnetic measurements.

  14. Physics-based deformable organisms for medical image analysis

    NASA Astrophysics Data System (ADS)

    Hamarneh, Ghassan; McIntosh, Chris

    2005-04-01

    Previously, "Deformable organisms" were introduced as a novel paradigm for medical image analysis that uses artificial life modelling concepts. Deformable organisms were designed to complement the classical bottom-up deformable models methodologies (geometrical and physical layers), with top-down intelligent deformation control mechanisms (behavioral and cognitive layers). However, a true physical layer was absent and in order to complete medical image segmentation tasks, deformable organisms relied on pure geometry-based shape deformations guided by sensory data, prior structural knowledge, and expert-generated schedules of behaviors. In this paper we introduce the use of physics-based shape deformations within the deformable organisms framework yielding additional robustness by allowing intuitive real-time user guidance and interaction when necessary. We present the results of applying our physics-based deformable organisms, with an underlying dynamic spring-mass mesh model, to segmenting and labelling the corpus callosum in 2D midsagittal magnetic resonance images.

  15. Geometrical model for DBMS: an experimental DBMS using IBM solid modeling

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ali, D.E.D.L.

    1985-01-01

    This research presents a new model for data base management systems (DBMS). The new model, Geometrical DBMS, is based on using solid modelling technology in designing and implementing DBMS. The Geometrical DBMS is implemented using the IBM solid modelling Geometric Design Processor (GDP). Built basically on computer-graphics concepts, Geometrical DBMS is indeed a unique model. Traditionally, researchers start with one of the existent DBMS models and then put a graphical front end on it. In Geometrical DBMS, the graphical aspect of the model is not an alien concept tailored to the model but is, as a matter of fact, themore » atom around which the model is designed. The main idea in Geometrical DBMS is to allow the user and the system to refer to and manipulate data items as a solid object in 3D space, and representing a record as a group of logically related solid objects. In Geometical DBMS, hierarchical structure is used to present the data relations and the user sees the data as a group of arrays; yet, for the user and the system together, the data structure is a multidimensional tree.« less

  16. Geometrical modelling of textile reinforcements

    NASA Technical Reports Server (NTRS)

    Pastore, Christopher M.; Birger, Alexander B.; Clyburn, Eugene

    1995-01-01

    The mechanical properties of textile composites are dictated by the arrangement of yarns contained with the material. Thus to develop a comprehensive understanding of the performance of these materials, it is necessary to develop a geometrical model of the fabric structure. This task is quite complex, as the fabric is made form highly flexible yarn systems which experience a certain degree of compressability. Furthermore there are tremendous forces acting on the fabric during densification typically resulting in yarn displacement and misorientation. The objective of this work is to develop a methodology for characterizing the geometry of yarns within a fabric structure including experimental techniques for evaluating these models. Furthermore, some applications of these geometric results to mechanical prediction models are demonstrated. Although more costly than its predecessors, the present analysis is based on the detailed architecture developed by one of the authors and his colleagues and accounts for many of the geometric complexities that other analyses ignore.

  17. On the impact of reducing global geophysical fluid model deformations in SLR data processing

    NASA Astrophysics Data System (ADS)

    Weigelt, Matthias; Thaller, Daniela

    2016-04-01

    Mass redistributions in the atmosphere, oceans and the continental hydrology cause elastic loading deformations of the Earth's crust and thus systematically influence Earth-bound observation systems such as VLBI, GNSS or SLR. Causing non-linear station variations, these loading deformations have a direct impact on the estimated station coordinates and an indirect impact on other parameters of global space-geodetic solutions, e.g. Earth orientation parameters, geocenter coordinates, satellite orbits or troposphere parameters. Generally, the impact can be mitigated by co-parameterisation or by reducing deformations derived from global geophysical fluid models. Here, we focus on the latter approach. A number of data sets modelling the (non-tidal) loading deformations are generated by various groups. They show regionally and locally significant differences and consequently the impact on the space-geodetic solutions heavily depends on the available network geometry. We present and discuss the differences between these models and choose SLR as the speace-geodetic technique of interest in order to discuss the impact of atmospheric, oceanic and hydrological loading on the parameters of space-geodetic solutions when correcting for the global geophysical fluid models at the observation level. Special emphasis is given to a consistent usage of models for geometric and gravimetric corrections during the data processing. We quantify the impact of the different deformation models on the station coordinates and discuss the improvement in the Earth orientation parameters and the geocenter motion. We also show that a significant reduction in the RMS of the station coordinates can be achieved depending on the model of choice.

  18. T -folds from Yang-Baxter deformations

    NASA Astrophysics Data System (ADS)

    Fernández-Melgarejo, José J.; Sakamoto, Jun-ichi; Sakatani, Yuho; Yoshida, Kentaroh

    2017-12-01

    Yang-Baxter (YB) deformations of type IIB string theory have been well studied from the viewpoint of classical integrability. Most of the works, however, are focused upon the local structure of the deformed geometries and the global structure still remains unclear. In this work, we reveal a non-geometric aspect of YB-deformed backgrounds as T -fold by explicitly showing the associated O( D, D; ℤ) T -duality monodromy. In particular, the appearance of an extra vector field in the generalized supergravity equations (GSE) leads to the non-geometric Q-flux. In addition, we study a particular solution of GSE that is obtained by a non-Abelian T-duality but cannot be expressed as a homogeneous YB deformation, and show that it can also be regarded as a T -fold. This result indicates that solutions of GSE should be non-geometric quite in general beyond the YB deformation.

  19. Multiscale geometric modeling of macromolecules II: Lagrangian representation

    PubMed Central

    Feng, Xin; Xia, Kelin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2013-01-01

    Geometric modeling of biomolecules plays an essential role in the conceptualization of biolmolecular structure, function, dynamics and transport. Qualitatively, geometric modeling offers a basis for molecular visualization, which is crucial for the understanding of molecular structure and interactions. Quantitatively, geometric modeling bridges the gap between molecular information, such as that from X-ray, NMR and cryo-EM, and theoretical/mathematical models, such as molecular dynamics, the Poisson-Boltzmann equation and the Nernst-Planck equation. In this work, we present a family of variational multiscale geometric models for macromolecular systems. Our models are able to combine multiresolution geometric modeling with multiscale electrostatic modeling in a unified variational framework. We discuss a suite of techniques for molecular surface generation, molecular surface meshing, molecular volumetric meshing, and the estimation of Hadwiger’s functionals. Emphasis is given to the multiresolution representations of biomolecules and the associated multiscale electrostatic analyses as well as multiresolution curvature characterizations. The resulting fine resolution representations of a biomolecular system enable the detailed analysis of solvent-solute interaction, and ion channel dynamics, while our coarse resolution representations highlight the compatibility of protein-ligand bindings and possibility of protein-protein interactions. PMID:23813599

  20. PLATFORM DEFORMATION PHASE CORRECTION FOR THE AMiBA-13 COPLANAR INTERFEROMETER

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liao, Yu-Wei; Lin, Kai-Yang; Huang, Yau-De

    2013-05-20

    We present a new way to solve the platform deformation problem of coplanar interferometers. The platform of a coplanar interferometer can be deformed due to driving forces and gravity. A deformed platform will induce extra components into the geometric delay of each baseline and change the phases of observed visibilities. The reconstructed images will also be diluted due to the errors of the phases. The platform deformations of The Yuan-Tseh Lee Array for Microwave Background Anisotropy (AMiBA) were modeled based on photogrammetry data with about 20 mount pointing positions. We then used the differential optical pointing error between two opticalmore » telescopes to fit the model parameters in the entire horizontal coordinate space. With the platform deformation model, we can predict the errors of the geometric phase delays due to platform deformation with a given azimuth and elevation of the targets and calibrators. After correcting the phases of the radio point sources in the AMiBA interferometric data, we recover 50%-70% flux loss due to phase errors. This allows us to restore more than 90% of a source flux. The method outlined in this work is not only applicable to the correction of deformation for other coplanar telescopes but also to single-dish telescopes with deformation problems. This work also forms the basis of the upcoming science results of AMiBA-13.« less

  1. Numerical Modeling of Exploitation Relics and Faults Influence on Rock Mass Deformations

    NASA Astrophysics Data System (ADS)

    Wesołowski, Marek

    2016-12-01

    This article presents numerical modeling results of fault planes and exploitation relics influenced by the size and distribution of rock mass and surface area deformations. Numerical calculations were performed using the finite difference program FLAC. To assess the changes taking place in a rock mass, an anisotropic elasto-plastic ubiquitous joint model was used, into which the Coulomb-Mohr strength (plasticity) condition was implemented. The article takes as an example the actual exploitation of the longwall 225 area in the seam 502wg of the "Pokój" coal mine. Computer simulations have shown that it is possible to determine the influence of fault planes and exploitation relics on the size and distribution of rock mass and its surface deformation. The main factor causing additional deformations of the area surface are the abandoned workings in the seam 502wd. These abandoned workings are the activation factor that caused additional subsidences and also, due to the significant dip, they are a layer on which the rock mass slides down in the direction of the extracted space. These factors are not taken into account by the geometrical and integral theories.

  2. Image-based Modeling of PSF Deformation with Application to Limited Angle PET Data

    PubMed Central

    Matej, Samuel; Li, Yusheng; Panetta, Joseph; Karp, Joel S.; Surti, Suleman

    2016-01-01

    The point-spread-functions (PSFs) of reconstructed images can be deformed due to detector effects such as resolution blurring and parallax error, data acquisition geometry such as insufficient sampling or limited angular coverage in dual-panel PET systems, or reconstruction imperfections/simplifications. PSF deformation decreases quantitative accuracy and its spatial variation lowers consistency of lesion uptake measurement across the imaging field-of-view (FOV). This can be a significant problem with dual panel PET systems even when using TOF data and image reconstruction models of the detector and data acquisition process. To correct for the spatially variant reconstructed PSF distortions we propose to use an image-based resolution model (IRM) that includes such image PSF deformation effects. Originally the IRM was mostly used for approximating data resolution effects of standard PET systems with full angular coverage in a computationally efficient way, but recently it was also used to mitigate effects of simplified geometric projectors. Our work goes beyond this by including into the IRM reconstruction imperfections caused by combination of the limited angle, parallax errors, and any other (residual) deformation effects and testing it for challenging dual panel data with strongly asymmetric and variable PSF deformations. We applied and tested these concepts using simulated data based on our design for a dedicated breast imaging geometry (B-PET) consisting of dual-panel, time-of-flight (TOF) detectors. We compared two image-based resolution models; i) a simple spatially invariant approximation to PSF deformation, which captures only the general PSF shape through an elongated 3D Gaussian function, and ii) a spatially variant model using a Gaussian mixture model (GMM) to more accurately capture the asymmetric PSF shape in images reconstructed from data acquired with the B-PET scanner geometry. Results demonstrate that while both IRMs decrease the overall uptake

  3. Deformation-Aware Log-Linear Models

    NASA Astrophysics Data System (ADS)

    Gass, Tobias; Deselaers, Thomas; Ney, Hermann

    In this paper, we present a novel deformation-aware discriminative model for handwritten digit recognition. Unlike previous approaches our model directly considers image deformations and allows discriminative training of all parameters, including those accounting for non-linear transformations of the image. This is achieved by extending a log-linear framework to incorporate a latent deformation variable. The resulting model has an order of magnitude less parameters than competing approaches to handling image deformations. We tune and evaluate our approach on the USPS task and show its generalization capabilities by applying the tuned model to the MNIST task. We gain interesting insights and achieve highly competitive results on both tasks.

  4. Modal Substructuring of Geometrically Nonlinear Finite-Element Models

    DOE PAGES

    Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

    2015-12-21

    The efficiency of a modal substructuring method depends on the component modes used to reduce each subcomponent model. Methods such as Craig–Bampton have been used extensively to reduce linear finite-element models with thousands or even millions of degrees of freedom down orders of magnitude while maintaining acceptable accuracy. A novel reduction method is proposed here for geometrically nonlinear finite-element models using the fixed-interface and constraint modes of the linearized system to reduce each subcomponent model. The geometric nonlinearity requires an additional cubic and quadratic polynomial function in the modal equations, and the nonlinear stiffness coefficients are determined by applying amore » series of static loads and using the finite-element code to compute the response. The geometrically nonlinear, reduced modal equations for each subcomponent are then coupled by satisfying compatibility and force equilibrium. This modal substructuring approach is an extension of the Craig–Bampton method and is readily applied to geometrically nonlinear models built directly within commercial finite-element packages. The efficiency of this new approach is demonstrated on two example problems: one that couples two geometrically nonlinear beams at a shared rotational degree of freedom, and another that couples an axial spring element to the axial degree of freedom of a geometrically nonlinear beam. The nonlinear normal modes of the assembled models are compared with those of a truth model to assess the accuracy of the novel modal substructuring approach.« less

  5. Modal Substructuring of Geometrically Nonlinear Finite-Element Models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

    The efficiency of a modal substructuring method depends on the component modes used to reduce each subcomponent model. Methods such as Craig–Bampton have been used extensively to reduce linear finite-element models with thousands or even millions of degrees of freedom down orders of magnitude while maintaining acceptable accuracy. A novel reduction method is proposed here for geometrically nonlinear finite-element models using the fixed-interface and constraint modes of the linearized system to reduce each subcomponent model. The geometric nonlinearity requires an additional cubic and quadratic polynomial function in the modal equations, and the nonlinear stiffness coefficients are determined by applying amore » series of static loads and using the finite-element code to compute the response. The geometrically nonlinear, reduced modal equations for each subcomponent are then coupled by satisfying compatibility and force equilibrium. This modal substructuring approach is an extension of the Craig–Bampton method and is readily applied to geometrically nonlinear models built directly within commercial finite-element packages. The efficiency of this new approach is demonstrated on two example problems: one that couples two geometrically nonlinear beams at a shared rotational degree of freedom, and another that couples an axial spring element to the axial degree of freedom of a geometrically nonlinear beam. The nonlinear normal modes of the assembled models are compared with those of a truth model to assess the accuracy of the novel modal substructuring approach.« less

  6. Probabilistic atlas and geometric variability estimation to drive tissue segmentation.

    PubMed

    Xu, Hao; Thirion, Bertrand; Allassonnière, Stéphanie

    2014-09-10

    Computerized anatomical atlases play an important role in medical image analysis. While an atlas usually refers to a standard or mean image also called template, which presumably represents well a given population, it is not enough to characterize the observed population in detail. A template image should be learned jointly with the geometric variability of the shapes represented in the observations. These two quantities will in the sequel form the atlas of the corresponding population. The geometric variability is modeled as deformations of the template image so that it fits the observations. In this paper, we provide a detailed analysis of a new generative statistical model based on dense deformable templates that represents several tissue types observed in medical images. Our atlas contains both an estimation of probability maps of each tissue (called class) and the deformation metric. We use a stochastic algorithm for the estimation of the probabilistic atlas given a dataset. This atlas is then used for atlas-based segmentation method to segment the new images. Experiments are shown on brain T1 MRI datasets. Copyright © 2014 John Wiley & Sons, Ltd.

  7. Geometrically Nonlinear Finite Element Analysis of a Composite Space Reflector

    NASA Technical Reports Server (NTRS)

    Lee, Kee-Joo; Leet, Sung W.; Clark, Greg; Broduer, Steve (Technical Monitor)

    2001-01-01

    Lightweight aerospace structures, such as low areal density composite space reflectors, are highly flexible and may undergo large deflection under applied loading, especially during the launch phase. Accordingly, geometrically nonlinear analysis that takes into account the effect of finite rotation may be needed to determine the deformed shape for a clearance check and the stress and strain state to ensure structural integrity. In this study, deformation of the space reflector is determined under static conditions using a geometrically nonlinear solid shell finite element model. For the solid shell element formulation, the kinematics of deformation is described by six variables that are purely vector components. Because rotational angles are not used, this approach is free of the limitations of small angle increments. This also allows easy connections between substructures and large load increments with respect to the conventional shell formulation using rotational parameters. Geometrically nonlinear analyses were carried out for three cases of static point loads applied at selected points. A chart shows results for a case when the load is applied at the center point of the reflector dish. The computed results capture the nonlinear behavior of the composite reflector as the applied load increases. Also, they are in good agreement with the data obtained by experiments.

  8. What Do Kinematic Models Imply About the Constitutive Properties of Rocks Deformed in Flat-Ramp-Flat Folds?

    NASA Astrophysics Data System (ADS)

    Cruz, L.; Nevitt, J. M.; Seixas, G.; Hilley, G. E.

    2017-10-01

    Kinematic theories of flat-ramp-flat folds relate fault angles to stratal dips in a way that allows prediction of structural geometries in areas of economic or scientific interest. However, these geometric descriptions imply constitutive properties of rocks that might be discordant with field and laboratory measurements. In this study, we compare deformation resulting from kinematic and mechanical models of flat-ramp-flat folds with identical geometries to determine the conditions over which kinematic models may be reasonably applied to folded rocks. Results show that most mechanical models do not conform to the geometries predicted by the kinematic models, and only low basal friction (μ ≤ 0.1) and shallow ramps (ramp angle ≤10°) produce geometries consistent with kinematic predictions. This implies that the kinematic models might be appropriate for a narrow set of geometric and basal fault friction parameters.

  9. Geometric and electrostatic modeling using molecular rigidity functions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mu, Lin; Xia, Kelin; Wei, Guowei

    Geometric and electrostatic modeling is an essential component in computational biophysics and molecular biology. Commonly used geometric representations admit geometric singularities such as cusps, tips and self-intersecting facets that lead to computational instabilities in the molecular modeling. Our present work explores the use of flexibility and rigidity index (FRI), which has a proved superiority in protein B-factor prediction, for biomolecular geometric representation and associated electrostatic analysis. FRI rigidity surfaces are free of geometric singularities. We propose a rigidity based Poisson–Boltzmann equation for biomolecular electrostatic analysis. These approaches to surface and electrostatic modeling are validated by a set of 21 proteins.more » Our results are compared with those of established methods. Finally, being smooth and analytically differentiable, FRI rigidity functions offer excellent curvature analysis, which characterizes concave and convex regions on protein surfaces. Polarized curvatures constructed by using the product of minimum curvature and electrostatic potential is shown to predict potential protein–ligand binding sites.« less

  10. Geometric and electrostatic modeling using molecular rigidity functions

    DOE PAGES

    Mu, Lin; Xia, Kelin; Wei, Guowei

    2017-03-01

    Geometric and electrostatic modeling is an essential component in computational biophysics and molecular biology. Commonly used geometric representations admit geometric singularities such as cusps, tips and self-intersecting facets that lead to computational instabilities in the molecular modeling. Our present work explores the use of flexibility and rigidity index (FRI), which has a proved superiority in protein B-factor prediction, for biomolecular geometric representation and associated electrostatic analysis. FRI rigidity surfaces are free of geometric singularities. We propose a rigidity based Poisson–Boltzmann equation for biomolecular electrostatic analysis. These approaches to surface and electrostatic modeling are validated by a set of 21 proteins.more » Our results are compared with those of established methods. Finally, being smooth and analytically differentiable, FRI rigidity functions offer excellent curvature analysis, which characterizes concave and convex regions on protein surfaces. Polarized curvatures constructed by using the product of minimum curvature and electrostatic potential is shown to predict potential protein–ligand binding sites.« less

  11. Geodesic active fields--a geometric framework for image registration.

    PubMed

    Zosso, Dominique; Bresson, Xavier; Thiran, Jean-Philippe

    2011-05-01

    In this paper we present a novel geometric framework called geodesic active fields for general image registration. In image registration, one looks for the underlying deformation field that best maps one image onto another. This is a classic ill-posed inverse problem, which is usually solved by adding a regularization term. Here, we propose a multiplicative coupling between the registration term and the regularization term, which turns out to be equivalent to embed the deformation field in a weighted minimal surface problem. Then, the deformation field is driven by a minimization flow toward a harmonic map corresponding to the solution of the registration problem. This proposed approach for registration shares close similarities with the well-known geodesic active contours model in image segmentation, where the segmentation term (the edge detector function) is coupled with the regularization term (the length functional) via multiplication as well. As a matter of fact, our proposed geometric model is actually the exact mathematical generalization to vector fields of the weighted length problem for curves and surfaces introduced by Caselles-Kimmel-Sapiro. The energy of the deformation field is measured with the Polyakov energy weighted by a suitable image distance, borrowed from standard registration models. We investigate three different weighting functions, the squared error and the approximated absolute error for monomodal images, and the local joint entropy for multimodal images. As compared to specialized state-of-the-art methods tailored for specific applications, our geometric framework involves important contributions. Firstly, our general formulation for registration works on any parametrizable, smooth and differentiable surface, including nonflat and multiscale images. In the latter case, multiscale images are registered at all scales simultaneously, and the relations between space and scale are intrinsically being accounted for. Second, this method is, to

  12. Parametric FEM for geometric biomembranes

    NASA Astrophysics Data System (ADS)

    Bonito, Andrea; Nochetto, Ricardo H.; Sebastian Pauletti, M.

    2010-05-01

    We consider geometric biomembranes governed by an L2-gradient flow for bending energy subject to area and volume constraints (Helfrich model). We give a concise derivation of a novel vector formulation, based on shape differential calculus, and corresponding discretization via parametric FEM using quadratic isoparametric elements and a semi-implicit Euler method. We document the performance of the new parametric FEM with a number of simulations leading to dumbbell, red blood cell and toroidal equilibrium shapes while exhibiting large deformations.

  13. Workshop on the Integration of Finite Element Modeling with Geometric Modeling

    NASA Technical Reports Server (NTRS)

    Wozny, Michael J.

    1987-01-01

    The workshop on the Integration of Finite Element Modeling with Geometric Modeling was held on 12 May 1987. It was held to discuss the geometric modeling requirements of the finite element modeling process and to better understand the technical aspects of the integration of these two areas. The 11 papers are presented except for one for which only the abstract is given.

  14. Deformations of the Almheiri-Polchinski model

    NASA Astrophysics Data System (ADS)

    Kyono, Hideki; Okumura, Suguru; Yoshida, Kentaroh

    2017-03-01

    We study deformations of the Almheiri-Polchinski (AP) model by employing the Yang-Baxter deformation technique. The general deformed AdS2 metric becomes a solution of a deformed AP model. In particular, the dilaton potential is deformed from a simple quadratic form to a hyperbolic function-type potential similarly to integrable deformations. A specific solution is a deformed black hole solution. Because the deformation makes the spacetime structure around the boundary change drastically and a new naked singularity appears, the holographic interpretation is far from trivial. The Hawking temperature is the same as the undeformed case but the Bekenstein-Hawking entropy is modified due to the deformation. This entropy can also be reproduced by evaluating the renormalized stress tensor with an appropriate counter-term on the regularized screen close to the singularity.

  15. Free-form geometric modeling by integrating parametric and implicit PDEs.

    PubMed

    Du, Haixia; Qin, Hong

    2007-01-01

    Parametric PDE techniques, which use partial differential equations (PDEs) defined over a 2D or 3D parametric domain to model graphical objects and processes, can unify geometric attributes and functional constraints of the models. PDEs can also model implicit shapes defined by level sets of scalar intensity fields. In this paper, we present an approach that integrates parametric and implicit trivariate PDEs to define geometric solid models containing both geometric information and intensity distribution subject to flexible boundary conditions. The integrated formulation of second-order or fourth-order elliptic PDEs permits designers to manipulate PDE objects of complex geometry and/or arbitrary topology through direct sculpting and free-form modeling. We developed a PDE-based geometric modeling system for shape design and manipulation of PDE objects. The integration of implicit PDEs with parametric geometry offers more general and arbitrary shape blending and free-form modeling for objects with intensity attributes than pure geometric models.

  16. Flow characteristics around a deformable stenosis under pulsatile flow condition

    NASA Astrophysics Data System (ADS)

    Choi, Woorak; Park, Jun Hong; Byeon, Hyeokjun; Lee, Sang Joon

    2018-01-01

    A specific portion of a vulnerable stenosis is deformed periodically under a pulsatile blood flow condition. Detailed analysis of such deformable stenosis is important because stenotic deformation can increase the likelihood of rupture, which may lead to sudden cardiac death or stroke. Various diagnostic indices have been developed for a nondeformable stenosis by using flow characteristics and resultant pressure drop across the stenosis. However, the effects of the stenotic deformation on the flow characteristics remain poorly understood. In this study, the flows around a deformable stenosis model and two different rigid stenosis models were investigated under a pulsatile flow condition. Particle image velocimetry was employed to measure flow structures around the three stenosis models. The deformable stenosis model was deformed to achieve high geometrical slope and height when the flow rate was increased. The deformation of the stenotic shape enhanced jet deflection toward the opposite vessel wall of the stenosis. The jet deflection in the deformable model increased the rate of jet velocity and turbulent kinetic energy (TKE) production as compared with those in the rigid models. The effect of stenotic deformation on the pulsating waveform related with the pressure drop was analyzed using the TKE production rate. The deformable stenosis model exhibited a phase delay of the peak point in the waveform. These results revealed the potential use of pressure drop waveform as a diagnostic index for deformable stenosis.

  17. A complete VLBI delay model for deforming radio telescopes: the Effelsberg case

    NASA Astrophysics Data System (ADS)

    Artz, T.; Springer, A.; Nothnagel, A.

    2014-12-01

    Deformations of radio telescopes used in geodetic and astrometric very long baseline interferometry (VLBI) observations belong to the class of systematic error sources which require correction in data analysis. In this paper we present a model for all path length variations in the geometrical optics of radio telescopes which are due to gravitational deformation. The Effelsberg 100 m radio telescope of the Max Planck Institute for Radio Astronomy, Bonn, Germany, has been surveyed by various terrestrial methods. Thus, all necessary information that is needed to model the path length variations is available. Additionally, a ray tracing program has been developed which uses as input the parameters of the measured deformations to produce an independent check of the theoretical model. In this program as well as in the theoretical model, the illumination function plays an important role because it serves as the weighting function for the individual path lengths depending on the distance from the optical axis. For the Effelsberg telescope, the biggest contribution to the total path length variations is the bending of the main beam located along the elevation axis which partly carries the weight of the paraboloid at its vertex. The difference in total path length is almost 100 mm when comparing observations at 90 and at 0 elevation angle. The impact of the path length corrections is validated in a global VLBI analysis. The application of the correction model leads to a change in the vertical position of mm. This is more than the maximum path length, but the effect can be explained by the shape of the correction function.

  18. Videogrammetric Model Deformation Measurement Technique

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Liu, Tian-Shu

    2001-01-01

    The theory, methods, and applications of the videogrammetric model deformation (VMD) measurement technique used at NASA for wind tunnel testing are presented. The VMD technique, based on non-topographic photogrammetry, can determine static and dynamic aeroelastic deformation and attitude of a wind-tunnel model. Hardware of the system includes a video-rate CCD camera, a computer with an image acquisition frame grabber board, illumination lights, and retroreflective or painted targets on a wind tunnel model. Custom software includes routines for image acquisition, target-tracking/identification, target centroid calculation, camera calibration, and deformation calculations. Applications of the VMD technique at five large NASA wind tunnels are discussed.

  19. Generalized Ehrenfest Relations, Deformation Quantization, and the Geometry of Inter-model Reduction

    NASA Astrophysics Data System (ADS)

    Rosaler, Joshua

    2018-03-01

    This study attempts to spell out more explicitly than has been done previously the connection between two types of formal correspondence that arise in the study of quantum-classical relations: one the one hand, deformation quantization and the associated continuity between quantum and classical algebras of observables in the limit \\hbar → 0, and, on the other, a certain generalization of Ehrenfest's Theorem and the result that expectation values of position and momentum evolve approximately classically for narrow wave packet states. While deformation quantization establishes a direct continuity between the abstract algebras of quantum and classical observables, the latter result makes in-eliminable reference to the quantum and classical state spaces on which these structures act—specifically, via restriction to narrow wave packet states. Here, we describe a certain geometrical re-formulation and extension of the result that expectation values evolve approximately classically for narrow wave packet states, which relies essentially on the postulates of deformation quantization, but describes a relationship between the actions of quantum and classical algebras and groups over their respective state spaces that is non-trivially distinct from deformation quantization. The goals of the discussion are partly pedagogical in that it aims to provide a clear, explicit synthesis of known results; however, the particular synthesis offered aspires to some novelty in its emphasis on a certain general type of mathematical and physical relationship between the state spaces of different models that represent the same physical system, and in the explicitness with which it details the above-mentioned connection between quantum and classical models.

  20. Effect of Shear Deformation and Continuity on Delamination Modelling with Plate Elements

    NASA Technical Reports Server (NTRS)

    Glaessgen, E. H.; Riddell, W. T.; Raju, I. S.

    1998-01-01

    The effects of several critical assumptions and parameters on the computation of strain energy release rates for delamination and debond configurations modeled with plate elements have been quantified. The method of calculation is based on the virtual crack closure technique (VCCT), and models that model the upper and lower surface of the delamination or debond with two-dimensional (2D) plate elements rather than three-dimensional (3D) solid elements. The major advantages of the plate element modeling technique are a smaller model size and simpler geometric modeling. Specific issues that are discussed include: constraint of translational degrees of freedom, rotational degrees of freedom or both in the neighborhood of the crack tip; element order and assumed shear deformation; and continuity of material properties and section stiffness in the vicinity of the debond front, Where appropriate, the plate element analyses are compared with corresponding two-dimensional plane strain analyses.

  1. Geometric modeling of subcellular structures, organelles, and multiprotein complexes

    PubMed Central

    Feng, Xin; Xia, Kelin; Tong, Yiying; Wei, Guo-Wei

    2013-01-01

    SUMMARY Recently, the structure, function, stability, and dynamics of subcellular structures, organelles, and multi-protein complexes have emerged as a leading interest in structural biology. Geometric modeling not only provides visualizations of shapes for large biomolecular complexes but also fills the gap between structural information and theoretical modeling, and enables the understanding of function, stability, and dynamics. This paper introduces a suite of computational tools for volumetric data processing, information extraction, surface mesh rendering, geometric measurement, and curvature estimation of biomolecular complexes. Particular emphasis is given to the modeling of cryo-electron microscopy data. Lagrangian-triangle meshes are employed for the surface presentation. On the basis of this representation, algorithms are developed for surface area and surface-enclosed volume calculation, and curvature estimation. Methods for volumetric meshing have also been presented. Because the technological development in computer science and mathematics has led to multiple choices at each stage of the geometric modeling, we discuss the rationales in the design and selection of various algorithms. Analytical models are designed to test the computational accuracy and convergence of proposed algorithms. Finally, we select a set of six cryo-electron microscopy data representing typical subcellular complexes to demonstrate the efficacy of the proposed algorithms in handling biomolecular surfaces and explore their capability of geometric characterization of binding targets. This paper offers a comprehensive protocol for the geometric modeling of subcellular structures, organelles, and multiprotein complexes. PMID:23212797

  2. Effects of Inertial and Geometric Nonlinearities in the Simulation of Flexible Aircraft Dynamics

    NASA Astrophysics Data System (ADS)

    Bun Tse, Bosco Chun

    This thesis examines the relative importance of the inertial and geometric nonlinearities in modelling the dynamics of a flexible aircraft. Inertial nonlinearities are derived by employing an exact definition of the velocity distribution and lead to coupling between the rigid body and elastic motions. The geometric nonlinearities are obtained by applying nonlinear theory of elasticity to the deformations. Peters' finite state unsteady aerodynamic model is used to evaluate the aerodynamic forces. Three approximate models obtained by excluding certain combinations of nonlinear terms are compared with that of the complete dynamics equations to obtain an indication of which terms are required for an accurate representation of the flexible aircraft behavior. A generic business jet model is used for the analysis. The results indicate that the nonlinear terms have a significant effect for more flexible aircraft, especially the geometric nonlinearities which leads to increased damping in the dynamics.

  3. Statistical modeling of interfractional tissue deformation and its application in radiation therapy planning

    NASA Astrophysics Data System (ADS)

    Vile, Douglas J.

    In radiation therapy, interfraction organ motion introduces a level of geometric uncertainty into the planning process. Plans, which are typically based upon a single instance of anatomy, must be robust against daily anatomical variations. For this problem, a model of the magnitude, direction, and likelihood of deformation is useful. In this thesis, principal component analysis (PCA) is used to statistically model the 3D organ motion for 19 prostate cancer patients, each with 8-13 fractional computed tomography (CT) images. Deformable image registration and the resultant displacement vector fields (DVFs) are used to quantify the interfraction systematic and random motion. By applying the PCA technique to the random DVFs, principal modes of random tissue deformation were determined for each patient, and a method for sampling synthetic random DVFs was developed. The PCA model was then extended to describe the principal modes of systematic and random organ motion for the population of patients. A leave-one-out study tested both the systematic and random motion model's ability to represent PCA training set DVFs. The random and systematic DVF PCA models allowed the reconstruction of these data with absolute mean errors between 0.5-0.9 mm and 1-2 mm, respectively. To the best of the author's knowledge, this study is the first successful effort to build a fully 3D statistical PCA model of systematic tissue deformation in a population of patients. By sampling synthetic systematic and random errors, organ occupancy maps were created for bony and prostate-centroid patient setup processes. By thresholding these maps, PCA-based planning target volume (PTV) was created and tested against conventional margin recipes (van Herk for bony alignment and 5 mm fixed [3 mm posterior] margin for centroid alignment) in a virtual clinical trial for low-risk prostate cancer. Deformably accumulated delivered dose served as a surrogate for clinical outcome. For the bony landmark setup

  4. Multiscale geometric modeling of macromolecules I: Cartesian representation

    NASA Astrophysics Data System (ADS)

    Xia, Kelin; Feng, Xin; Chen, Zhan; Tong, Yiying; Wei, Guo-Wei

    2014-01-01

    This paper focuses on the geometric modeling and computational algorithm development of biomolecular structures from two data sources: Protein Data Bank (PDB) and Electron Microscopy Data Bank (EMDB) in the Eulerian (or Cartesian) representation. Molecular surface (MS) contains non-smooth geometric singularities, such as cusps, tips and self-intersecting facets, which often lead to computational instabilities in molecular simulations, and violate the physical principle of surface free energy minimization. Variational multiscale surface definitions are proposed based on geometric flows and solvation analysis of biomolecular systems. Our approach leads to geometric and potential driven Laplace-Beltrami flows for biomolecular surface evolution and formation. The resulting surfaces are free of geometric singularities and minimize the total free energy of the biomolecular system. High order partial differential equation (PDE)-based nonlinear filters are employed for EMDB data processing. We show the efficacy of this approach in feature-preserving noise reduction. After the construction of protein multiresolution surfaces, we explore the analysis and characterization of surface morphology by using a variety of curvature definitions. Apart from the classical Gaussian curvature and mean curvature, maximum curvature, minimum curvature, shape index, and curvedness are also applied to macromolecular surface analysis for the first time. Our curvature analysis is uniquely coupled to the analysis of electrostatic surface potential, which is a by-product of our variational multiscale solvation models. As an expository investigation, we particularly emphasize the numerical algorithms and computational protocols for practical applications of the above multiscale geometric models. Such information may otherwise be scattered over the vast literature on this topic. Based on the curvature and electrostatic analysis from our multiresolution surfaces, we introduce a new concept, the

  5. The effects of geometric uncertainties on computational modelling of knee biomechanics

    PubMed Central

    Fisher, John; Wilcox, Ruth

    2017-01-01

    The geometry of the articular components of the knee is an important factor in predicting joint mechanics in computational models. There are a number of uncertainties in the definition of the geometry of cartilage and meniscus, and evaluating the effects of these uncertainties is fundamental to understanding the level of reliability of the models. In this study, the sensitivity of knee mechanics to geometric uncertainties was investigated by comparing polynomial-based and image-based knee models and varying the size of meniscus. The results suggested that the geometric uncertainties in cartilage and meniscus resulting from the resolution of MRI and the accuracy of segmentation caused considerable effects on the predicted knee mechanics. Moreover, even if the mathematical geometric descriptors can be very close to the imaged-based articular surfaces, the detailed contact pressure distribution produced by the mathematical geometric descriptors was not the same as that of the image-based model. However, the trends predicted by the models based on mathematical geometric descriptors were similar to those of the imaged-based models. PMID:28879008

  6. The effects of geometric uncertainties on computational modelling of knee biomechanics

    NASA Astrophysics Data System (ADS)

    Meng, Qingen; Fisher, John; Wilcox, Ruth

    2017-08-01

    The geometry of the articular components of the knee is an important factor in predicting joint mechanics in computational models. There are a number of uncertainties in the definition of the geometry of cartilage and meniscus, and evaluating the effects of these uncertainties is fundamental to understanding the level of reliability of the models. In this study, the sensitivity of knee mechanics to geometric uncertainties was investigated by comparing polynomial-based and image-based knee models and varying the size of meniscus. The results suggested that the geometric uncertainties in cartilage and meniscus resulting from the resolution of MRI and the accuracy of segmentation caused considerable effects on the predicted knee mechanics. Moreover, even if the mathematical geometric descriptors can be very close to the imaged-based articular surfaces, the detailed contact pressure distribution produced by the mathematical geometric descriptors was not the same as that of the image-based model. However, the trends predicted by the models based on mathematical geometric descriptors were similar to those of the imaged-based models.

  7. Cooperative deformations of periodically patterned hydrogels.

    PubMed

    Wang, Zhi Jian; Zhu, Chao Nan; Hong, Wei; Wu, Zi Liang; Zheng, Qiang

    2017-09-01

    Nature has shown elegant paradigms of smart deformation, which inspired biomimetic systems with controllable bending, folding, and twisting that are significant for the development of soft electronics and actuators. Complex deformations are usually realized by additively incorporating typical structures in selective domains with little interaction. We demonstrate the cooperative deformations of periodically patterned hydrogel sheets, in which neighboring domains mutually interact and cooperatively deform. Nonswelling disc gels are periodically positioned in a high-swelling gel. During the swelling process, the compartmentalized high-swelling gel alternately bends upward or downward to relieve the in-plane compression, but the overall integrated structure remains flat. The synergy between the elastic mismatch and the geometric periodicity selects the outcome pattern. Both experiment and modeling show that various types of cooperative deformation can be achieved by tuning the pattern geometry and gel properties. Different responsive polymers can also be patterned in one composite gel. Under stimulation, reversible transformations between different cooperative deformations are realized. The principle of cooperative deformation should be applicable to other materials, and the patterns can be miniaturized to the micrometer- or nanometer-scale level, providing the morphing materials with advanced functionalities for applications in various fields.

  8. Dimensional, Geometrical, and Physical Constraints in Skull Growth.

    PubMed

    Weickenmeier, Johannes; Fischer, Cedric; Carter, Dennis; Kuhl, Ellen; Goriely, Alain

    2017-06-16

    After birth, the skull grows and remodels in close synchrony with the brain to allow for an increase in intracranial volume. Increase in skull area is provided primarily by bone accretion at the sutures. Additional remodeling, to allow for a change in curvatures, occurs by resorption on the inner surface of the bone plates and accretion on their outer surfaces. When a suture fuses too early, normal skull growth is disrupted, leading to a deformed final skull shape. The leading theory assumes that the main stimulus for skull growth is provided by mechanical stresses. Based on these ideas, we first discuss the dimensional, geometrical, and kinematic synchrony between brain, skull, and suture growth. Second, we present two mechanical models for skull growth that account for growth at the sutures and explain the various observed dysmorphologies. These models demonstrate the particular role of physical and geometrical constraints taking place in skull growth.

  9. Dimensional, Geometrical, and Physical Constraints in Skull Growth

    NASA Astrophysics Data System (ADS)

    Weickenmeier, Johannes; Fischer, Cedric; Carter, Dennis; Kuhl, Ellen; Goriely, Alain

    2017-06-01

    After birth, the skull grows and remodels in close synchrony with the brain to allow for an increase in intracranial volume. Increase in skull area is provided primarily by bone accretion at the sutures. Additional remodeling, to allow for a change in curvatures, occurs by resorption on the inner surface of the bone plates and accretion on their outer surfaces. When a suture fuses too early, normal skull growth is disrupted, leading to a deformed final skull shape. The leading theory assumes that the main stimulus for skull growth is provided by mechanical stresses. Based on these ideas, we first discuss the dimensional, geometrical, and kinematic synchrony between brain, skull, and suture growth. Second, we present two mechanical models for skull growth that account for growth at the sutures and explain the various observed dysmorphologies. These models demonstrate the particular role of physical and geometrical constraints taking place in skull growth.

  10. Optimizing Cubature for Efficient Integration of Subspace Deformations

    PubMed Central

    An, Steven S.; Kim, Theodore; James, Doug L.

    2009-01-01

    We propose an efficient scheme for evaluating nonlinear subspace forces (and Jacobians) associated with subspace deformations. The core problem we address is efficient integration of the subspace force density over the 3D spatial domain. Similar to Gaussian quadrature schemes that efficiently integrate functions that lie in particular polynomial subspaces, we propose cubature schemes (multi-dimensional quadrature) optimized for efficient integration of force densities associated with particular subspace deformations, particular materials, and particular geometric domains. We support generic subspace deformation kinematics, and nonlinear hyperelastic materials. For an r-dimensional deformation subspace with O(r) cubature points, our method is able to evaluate subspace forces at O(r2) cost. We also describe composite cubature rules for runtime error estimation. Results are provided for various subspace deformation models, several hyperelastic materials (St.Venant-Kirchhoff, Mooney-Rivlin, Arruda-Boyce), and multimodal (graphics, haptics, sound) applications. We show dramatically better efficiency than traditional Monte Carlo integration. CR Categories: I.6.8 [Simulation and Modeling]: Types of Simulation—Animation, I.3.5 [Computer Graphics]: Computational Geometry and Object Modeling—Physically based modeling G.1.4 [Mathematics of Computing]: Numerical Analysis—Quadrature and Numerical Differentiation PMID:19956777

  11. Analysis of Geometric Thinking Students’ and Process-Guided Inquiry Learning Model

    NASA Astrophysics Data System (ADS)

    Hardianti, D.; Priatna, N.; Priatna, B. A.

    2017-09-01

    This research aims to analysis students’ geometric thinking ability and theoretically examine the process-oriented guided iquiry (POGIL) model. This study uses qualitative approach with descriptive method because this research was done without any treatment on subjects. Data were collected naturally. This study was conducted in one of the State Junior High School in Bandung. The population was second grade students and the sample was 32 students. Data of students’ geometric thinking ability were collected through geometric thinking test. These questions are made based on the characteristics of geometry thinking based on van hiele’s theory. Based on the results of the analysis and discussion, students’ geometric thinking ability is still low so it needs to be improved. Therefore, an effort is needed to overcome the problems related to students’ geometric thinking ability. One of the efforts that can be done by doing the learning that can facilitate the students to construct their own geometry concept, especially quadrilateral’s concepts so that students’ geometric thinking ability can enhance maximally. Based on study of the theory, one of the learning models that can enhance the students’ geometric thinking ability is POGIL model.

  12. Geometric comparison of popular mixture-model distances.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Scott A.

    2010-09-01

    Statistical Latent Dirichlet Analysis produces mixture model data that are geometrically equivalent to points lying on a regular simplex in moderate to high dimensions. Numerous other statistical models and techniques also produce data in this geometric category, even though the meaning of the axes and coordinate values differs significantly. A distance function is used to further analyze these points, for example to cluster them. Several different distance functions are popular amongst statisticians; which distance function is chosen is usually driven by the historical preference of the application domain, information-theoretic considerations, or by the desirability of the clustering results. Relatively littlemore » consideration is usually given to how distance functions geometrically transform data, or the distances algebraic properties. Here we take a look at these issues, in the hope of providing complementary insight and inspiring further geometric thought. Several popular distances, {chi}{sup 2}, Jensen - Shannon divergence, and the square of the Hellinger distance, are shown to be nearly equivalent; in terms of functional forms after transformations, factorizations, and series expansions; and in terms of the shape and proximity of constant-value contours. This is somewhat surprising given that their original functional forms look quite different. Cosine similarity is the square of the Euclidean distance, and a similar geometric relationship is shown with Hellinger and another cosine. We suggest a geodesic variation of Hellinger. The square-root projection that arises in Hellinger distance is briefly compared to standard normalization for Euclidean distance. We include detailed derivations of some ratio and difference bounds for illustrative purposes. We provide some constructions that nearly achieve the worst-case ratios, relevant for contours.« less

  13. Model-based vision using geometric hashing

    NASA Astrophysics Data System (ADS)

    Akerman, Alexander, III; Patton, Ronald

    1991-04-01

    The Geometric Hashing technique developed by the NYU Courant Institute has been applied to various automatic target recognition applications. In particular, I-MATH has extended the hashing algorithm to perform automatic target recognition ofsynthetic aperture radar (SAR) imagery. For this application, the hashing is performed upon the geometric locations of dominant scatterers. In addition to being a robust model-based matching algorithm -- invariant under translation, scale, and 3D rotations of the target -- hashing is of particular utility because it can still perform effective matching when the target is partially obscured. Moreover, hashing is very amenable to a SIMD parallel processing architecture, and thus potentially realtime implementable.

  14. Investigation of the effects of aeroelastic deformations on the radar cross section of aircraft

    NASA Astrophysics Data System (ADS)

    McKenzie, Samuel D.

    1991-12-01

    The effects of aeroelastic deformations on the radar cross section (RCS) of a T-38 trainer jet and a C-5A transport aircraft are examined and characterized. Realistic representations of structural wing deformations are obtained from a mechanical/computer aided design software package called NASTRAN. NASTRAN is used to evaluate the structural parameters of the aircraft as well as the restraints and loads associated with realistic flight conditions. Geometries for both the non-deformed and deformed airframes are obtained from the NASTRAN models and translated into RCS models. The RCS is analyzed using a numerical modeling code called the Radar Cross Section - Basic Scattering Code, version 2 which was developed at the Ohio State University and is based on the uniform geometric theory of diffraction. The code is used to analyze the effects of aeroelastic deformations on the RCS of the aircraft by comparing the computed RCS representing the deformed airframe to that of the non-deformed airframe and characterizing the differences between them.

  15. Geometric modeling for computer aided design

    NASA Technical Reports Server (NTRS)

    Schwing, James L.

    1993-01-01

    Over the past several years, it has been the primary goal of this grant to design and implement software to be used in the conceptual design of aerospace vehicles. The work carried out under this grant was performed jointly with members of the Vehicle Analysis Branch (VAB) of NASA LaRC, Computer Sciences Corp., and Vigyan Corp. This has resulted in the development of several packages and design studies. Primary among these are the interactive geometric modeling tool, the Solid Modeling Aerospace Research Tool (smart), and the integration and execution tools provided by the Environment for Application Software Integration and Execution (EASIE). In addition, it is the purpose of the personnel of this grant to provide consultation in the areas of structural design, algorithm development, and software development and implementation, particularly in the areas of computer aided design, geometric surface representation, and parallel algorithms.

  16. Dynamic analysis of geometrically non-linear three-dimensional beams under moving mass

    NASA Astrophysics Data System (ADS)

    Zupan, E.; Zupan, D.

    2018-01-01

    In this paper, we present a coupled dynamic analysis of a moving particle on a deformable three-dimensional frame. The presented numerical model is capable of considering arbitrary curved and twisted initial geometry of the beam and takes into account geometric non-linearity of the structure. Coupled with dynamic equations of the structure, the equations of moving particle are solved. The moving particle represents the dynamic load and varies the mass distribution of the structure and at the same time its path is adapting due to deformability of the structure. A coupled geometrically non-linear behaviour of beam and particle is studied. The equation of motion of the particle is added to the system of the beam dynamic equations and an additional unknown representing the coordinate of the curvilinear path of the particle is introduced. The specially designed finite-element formulation of the three-dimensional beam based on the weak form of consistency conditions is employed where only the boundary conditions are affected by the contact forces.

  17. Geometric mechanics of periodic pleated origami.

    PubMed

    Wei, Z Y; Guo, Z V; Dudte, L; Liang, H Y; Mahadevan, L

    2013-05-24

    Origami structures are mechanical metamaterials with properties that arise almost exclusively from the geometry of the constituent folds and the constraint of piecewise isometric deformations. Here we characterize the geometry and planar and nonplanar effective elastic response of a simple periodically folded Miura-ori structure, which is composed of identical unit cells of mountain and valley folds with four-coordinated ridges, defined completely by two angles and two lengths. We show that the in-plane and out-of-plane Poisson's ratios are equal in magnitude, but opposite in sign, independent of material properties. Furthermore, we show that effective bending stiffness of the unit cell is singular, allowing us to characterize the two-dimensional deformation of a plate in terms of a one-dimensional theory. Finally, we solve the inverse design problem of determining the geometric parameters for the optimal geometric and mechanical response of these extreme structures.

  18. Geometric Model for Tracker-Target Look Angles and Line of Slight Distance

    DTIC Science & Technology

    2015-10-20

    412TW-PA-15239 Geometric Model for Tracker -Target Look Angles and Line of Slight Distance DANIEL T. LAIRD AIR FORCE TEST CENTER EDWARDS...15 – 23 OCT 15 4. TITLE AND SUBTITLE Geometric Model for Tracker -Target Look Angles and Line of Slight Distance 5a. CONTRACT...include area code) 661-277-8615 Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std. Z39.18 GEOMETRIC MODEL FOR TRACKER -TARGET LOOK ANGLES

  19. Model Deformation Measurements of Sonic Boom Models in the NASA Ames 9- by 7-Ft Supersonic Wind Tunnel

    NASA Technical Reports Server (NTRS)

    Schairer, Edward T.; Kushner, Laura K.; Garbeff, Theodore J.; Heineck, James T.

    2015-01-01

    The deformations of two sonic-boom models were measured by stereo photogrammetry during tests in the 9- by 7-Ft Supersonic Wind Tunnel at NASA Ames Research Center. The models were geometrically similar but one was 2.75 times as large as the other. Deformation measurements were made by simultaneously imaging the upper surfaces of the models from two directions by calibrated cameras that were mounted behind windows of the test section. Bending and twist were measured at discrete points using conventional circular targets that had been marked along the leading and trailing edges of the wings and tails. In addition, continuous distributions of bending and twist were measured from ink speckles that had been applied to the upper surfaces of the model. Measurements were made at wind-on (M = 1.6) and wind-off conditions over a range of angles of attack between 2.5 deg. and 5.0 deg. At each condition, model deformation was determined by comparing the wind-off and wind-on coordinates of each measurement point after transforming the coordinates to reference coordinates tied to the model. The necessary transformations were determined by measuring the positions of a set of targets on the rigid center-body of the models whose model-axes coordinates were known. Smoothly varying bending and twist measurements were obtained at all conditions. Bending displacements increased in proportion to the square of the distance to the centerline. Maximum deflection of the wingtip of the larger model was about 5 mm (2% of the semispan) and that of the smaller model was 0.9 mm (1% of the semispan). The change in wing twist due to bending increased in direct proportion to distance from the centerline and reached a (absolute) maximum of about -1? at the highest angle of attack for both models. The measurements easily resolved bending displacements as small as 0.05 mm and bending-induced changes in twist as small as 0.05 deg.

  20. Models for determining the geometrical properties of halo coronal mass ejections

    NASA Astrophysics Data System (ADS)

    Zhao, X.; Liu, Y.

    2005-12-01

    To this day, the prediction of space weather effects near the Earth suffer from a fundamental problem: the necessary condition for determining whether or not and when a part of the huge interplanetary counterpart (ICME) of frontside halo coronal mass ejections (CMEs) is able to hit the Earth and generate goemagnetic storms, i.e., the real angular width, the propagation direction and speed of the CMEs, cannot be measured directly because of the unfavorable geometry. To inverse these geometrical and kinematical properties we have recently developed a few geometrical models, such as the cone model, the ice cream cone model, and the spherical cone model. The inversing solution of the cone model for the 12 may 1997 halo CME has been used as an input to the ENLIL model (a 3D MHD solar wind code) and successfully predicted the ICME near the Earth (Zhao, Plukett & Liu, 2002; Odstrcil, Riley & Zhao, 2004). After briefly describing the geometrical models this presentation will discuss: 1. What kind of halo CMEs can be inversed? 2. How to select the geometrical models given a specific halo CME? 3. Whether or not the inversing solution is unique?

  1. Patient-specific non-linear finite element modelling for predicting soft organ deformation in real-time: application to non-rigid neuroimage registration.

    PubMed

    Wittek, Adam; Joldes, Grand; Couton, Mathieu; Warfield, Simon K; Miller, Karol

    2010-12-01

    Long computation times of non-linear (i.e. accounting for geometric and material non-linearity) biomechanical models have been regarded as one of the key factors preventing application of such models in predicting organ deformation for image-guided surgery. This contribution presents real-time patient-specific computation of the deformation field within the brain for six cases of brain shift induced by craniotomy (i.e. surgical opening of the skull) using specialised non-linear finite element procedures implemented on a graphics processing unit (GPU). In contrast to commercial finite element codes that rely on an updated Lagrangian formulation and implicit integration in time domain for steady state solutions, our procedures utilise the total Lagrangian formulation with explicit time stepping and dynamic relaxation. We used patient-specific finite element meshes consisting of hexahedral and non-locking tetrahedral elements, together with realistic material properties for the brain tissue and appropriate contact conditions at the boundaries. The loading was defined by prescribing deformations on the brain surface under the craniotomy. Application of the computed deformation fields to register (i.e. align) the preoperative and intraoperative images indicated that the models very accurately predict the intraoperative deformations within the brain. For each case, computing the brain deformation field took less than 4 s using an NVIDIA Tesla C870 GPU, which is two orders of magnitude reduction in computation time in comparison to our previous study in which the brain deformation was predicted using a commercial finite element solver executed on a personal computer. Copyright © 2010 Elsevier Ltd. All rights reserved.

  2. Modeling crustal deformation near active faults and volcanic centers: a catalog of deformation models and modeling approaches

    USGS Publications Warehouse

    Battaglia, Maurizio; ,; Peter, F.; Murray, Jessica R.

    2013-01-01

    This manual provides the physical and mathematical concepts for selected models used to interpret deformation measurements near active faults and volcanic centers. The emphasis is on analytical models of deformation that can be compared with data from the Global Positioning System (GPS) receivers, Interferometric synthetic aperture radar (InSAR), leveling surveys, tiltmeters and strainmeters. Source models include pressurized spherical, ellipsoidal, and horizontal penny-shaped geometries in an elastic, homogeneous, flat half-space. Vertical dikes and faults are described following the mathematical notation for rectangular dislocations in an elastic, homogeneous, flat half-space. All the analytical expressions were verified against numerical models developed by use of COMSOL Multyphics, a Finite Element Analysis software (http://www.comsol.com). In this way, typographical errors present were identified and corrected. Matlab scripts are also provided to facilitate the application of these models.

  3. Extension of non-linear beam models with deformable cross sections

    NASA Astrophysics Data System (ADS)

    Sokolov, I.; Krylov, S.; Harari, I.

    2015-12-01

    Geometrically exact beam theory is extended to allow distortion of the cross section. We present an appropriate set of cross-section basis functions and provide physical insight to the cross-sectional distortion from linear elastostatics. The beam formulation in terms of material (back-rotated) beam internal force resultants and work-conjugate kinematic quantities emerges naturally from the material description of virtual work of constrained finite elasticity. The inclusion of cross-sectional deformation allows straightforward application of three-dimensional constitutive laws in the beam formulation. Beam counterparts of applied loads are expressed in terms of the original three-dimensional data. Special attention is paid to the treatment of the applied stress, keeping in mind applications such as hydrogel actuators under environmental stimuli or devices made of electroactive polymers. Numerical comparisons show the ability of the beam model to reproduce finite elasticity results with good efficiency.

  4. Geometric and computer-aided spline hob modeling

    NASA Astrophysics Data System (ADS)

    Brailov, I. G.; Myasoedova, T. M.; Panchuk, K. L.; Krysova, I. V.; Rogoza, YU A.

    2018-03-01

    The paper considers acquiring the spline hob geometric model. The objective of the research is the development of a mathematical model of spline hob for spline shaft machining. The structure of the spline hob is described taking into consideration the motion in parameters of the machine tool system of cutting edge positioning and orientation. Computer-aided study is performed with the use of CAD and on the basis of 3D modeling methods. Vector representation of cutting edge geometry is accepted as the principal method of spline hob mathematical model development. The paper defines the correlations described by parametric vector functions representing helical cutting edges designed for spline shaft machining with consideration for helical movement in two dimensions. An application for acquiring the 3D model of spline hob is developed on the basis of AutoLISP for AutoCAD environment. The application presents the opportunity for the use of the acquired model for milling process imitation. An example of evaluation, analytical representation and computer modeling of the proposed geometrical model is reviewed. In the mentioned example, a calculation of key spline hob parameters assuring the capability of hobbing a spline shaft of standard design is performed. The polygonal and solid spline hob 3D models are acquired by the use of imitational computer modeling.

  5. Geometric Models for Collaborative Search and Filtering

    ERIC Educational Resources Information Center

    Bitton, Ephrat

    2011-01-01

    This dissertation explores the use of geometric and graphical models for a variety of information search and filtering applications. These models serve to provide an intuitive understanding of the problem domains and as well as computational efficiencies to our solution approaches. We begin by considering a search and rescue scenario where both…

  6. Geometric curvature and phase of the Rabi model

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mao, Lijun; Huai, Sainan; Guo, Liping

    2015-11-15

    We study the geometric curvature and phase of the Rabi model. Under the rotating-wave approximation (RWA), we apply the gauge independent Berry curvature over a surface integral to calculate the Berry phase of the eigenstates for both single and two-qubit systems, which is found to be identical with the system of spin-1/2 particle in a magnetic field. We extend the idea to define a vacuum-induced geometric curvature when the system starts from an initial state with pure vacuum bosonic field. The induced geometric phase is related to the average photon number in a period which is possible to measure inmore » the qubit–cavity system. We also calculate the geometric phase beyond the RWA and find an anomalous sudden change, which implies the breakdown of the adiabatic theorem and the Berry phases in an adiabatic cyclic evolution are ill-defined near the anti-crossing point in the spectrum.« less

  7. An electromechanical based deformable model for soft tissue simulation.

    PubMed

    Zhong, Yongmin; Shirinzadeh, Bijan; Smith, Julian; Gu, Chengfan

    2009-11-01

    Soft tissue deformation is of great importance to surgery simulation. Although a significant amount of research efforts have been dedicated to simulating the behaviours of soft tissues, modelling of soft tissue deformation is still a challenging problem. This paper presents a new deformable model for simulation of soft tissue deformation from the electromechanical viewpoint of soft tissues. Soft tissue deformation is formulated as a reaction-diffusion process coupled with a mechanical load. The mechanical load applied to a soft tissue to cause a deformation is incorporated into the reaction-diffusion system, and consequently distributed among mass points of the soft tissue. Reaction-diffusion of mechanical load and non-rigid mechanics of motion are combined to govern the simulation dynamics of soft tissue deformation. An improved reaction-diffusion model is developed to describe the distribution of the mechanical load in soft tissues. A three-layer artificial cellular neural network is constructed to solve the reaction-diffusion model for real-time simulation of soft tissue deformation. A gradient based method is established to derive internal forces from the distribution of the mechanical load. Integration with a haptic device has also been achieved to simulate soft tissue deformation with haptic feedback. The proposed methodology does not only predict the typical behaviours of living tissues, but it also accepts both local and large-range deformations. It also accommodates isotropic, anisotropic and inhomogeneous deformations by simple modification of diffusion coefficients.

  8. Meshless Modeling of Deformable Shapes and their Motion

    PubMed Central

    Adams, Bart; Ovsjanikov, Maks; Wand, Michael; Seidel, Hans-Peter; Guibas, Leonidas J.

    2010-01-01

    We present a new framework for interactive shape deformation modeling and key frame interpolation based on a meshless finite element formulation. Starting from a coarse nodal sampling of an object’s volume, we formulate rigidity and volume preservation constraints that are enforced to yield realistic shape deformations at interactive frame rates. Additionally, by specifying key frame poses of the deforming shape and optimizing the nodal displacements while targeting smooth interpolated motion, our algorithm extends to a motion planning framework for deformable objects. This allows reconstructing smooth and plausible deformable shape trajectories in the presence of possibly moving obstacles. The presented results illustrate that our framework can handle complex shapes at interactive rates and hence is a valuable tool for animators to realistically and efficiently model and interpolate deforming 3D shapes. PMID:24839614

  9. HSR Model Deformation Measurements from Subsonic to Supersonic Speeds

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Erickson, G. E.; Goodman, W. L.; Fleming, G. A.

    1999-01-01

    This paper describes the video model deformation technique (VMD) used at five NASA facilities and the projection moire interferometry (PMI) technique used at two NASA facilities. Comparisons between the two techniques for model deformation measurements are provided. Facilities at NASA-Ames and NASA-Langley where deformation measurements have been made are presented. Examples of HSR model deformation measurements from the Langley Unitary Wind Tunnel, Langley 16-foot Transonic Wind Tunnel, and the Ames 12-foot Pressure Tunnel are presented. A study to improve and develop new targeting schemes at the National Transonic Facility is also described. The consideration of milled targets for future HSR models is recommended when deformation measurements are expected to be required. Finally, future development work for VMD and PMI is addressed.

  10. Deformation modeling and constitutive modeling for anisotropic superalloys

    NASA Technical Reports Server (NTRS)

    Milligan, Walter W.; Antolovich, Stephen D.

    1989-01-01

    A study of deformation mechanisms in the single crystal superalloy PWA 1480 was conducted. Monotonic and cyclic tests were conducted from 20 to 1093 C. Both (001) and near-(123) crystals were tested, at strain rates of 0.5 and 50 percent/minute. The deformation behavior could be grouped into two temperature regimes: low temperatures, below 760 C; and high temperatures, above 820 to 950 C depending on the strain rate. At low temperatures, the mechanical behavior was very anisotropic. An orientation dependent CRSS, a tension-compression asymmetry, and anisotropic strain hardening were all observed. The material was deformed by planar octahedral slip. The anisotropic properties were correlated with the ease of cube cross-slip, as well as the number of active slip systems. At high temperatures, the material was isotropic, and deformed by homogeneous gamma by-pass. It was found that the temperature dependence of the formation of superlattice-intrinsic stacking faults was responsible for the local minimum in the CRSS of this alloy at 400 C. It was proposed that the cube cross-slip process must be reversible. This was used to explain the reversible tension-compression asymmetry, and was used to study models of cross-slip. As a result, the cross-slip model proposed by Paidar, Pope and Vitek was found to be consistent with the proposed slip reversibility. The results were related to anisotropic viscoplastic constitutive models. The model proposed by Walter and Jordan was found to be capable of modeling all aspects of the material anisotropy. Temperature and strain rate boundaries for the model were proposed, and guidelines for numerical experiments were proposed.

  11. Modeling bidirectional reflectance of forests and woodlands using Boolean models and geometric optics

    NASA Technical Reports Server (NTRS)

    Strahler, Alan H.; Jupp, David L. B.

    1990-01-01

    Geometric-optical discrete-element mathematical models for forest canopies have been developed using the Boolean logic and models of Serra. The geometric-optical approach is considered to be particularly well suited to describing the bidirectional reflectance of forest woodland canopies, where the concentration of leaf material within crowns and the resulting between-tree gaps make plane-parallel, radiative-transfer models inappropriate. The approach leads to invertible formulations, in which the spatial and directional variance provides the means for remote estimation of tree crown size, shape, and total cover from remotedly sensed imagery.

  12. Geometric effects in the electronic transport of deformed nanotubes

    NASA Astrophysics Data System (ADS)

    Santos, Fernando; Fumeron, Sébastien; Berche, Bertrand; Moraes, Fernando

    2016-04-01

    Quasi-two-dimensional systems may exibit curvature, which adds three-dimensional influence to their internal properties. As shown by da Costa (1981 Phys. Rev. A 23 1982-7), charged particles moving on a curved surface experience a curvature-dependent potential which greatly influence their dynamics. In this paper, we study the electronic ballistic transport in deformed nanotubes. The one-electron Schrödinger equation with open boundary conditions is solved numerically with a flexible MAPLE code made available as supplementary data. We find that the curvature of the deformations indeed has strong effects on the electron dynamics, suggesting its use in the design of nanotube-based electronic devices.

  13. Deformation and relaxation of an incompressible viscoelastic body with surface viscoelasticity

    NASA Astrophysics Data System (ADS)

    Liu, Liping; Yu, Miao; Lin, Hao; Foty, Ramsey

    2017-01-01

    Measuring mechanical properties of cells or cell aggregates has proven to be an involved process due to their geometrical and structural complexity. Past measurements are based on material models that completely neglect the elasticity of either the surface membrane or the interior bulk. In this work, we consider general material models to account for both surface and bulk viscoelasticity. The boundary value problems are formulated for deformations and relaxations of a closed viscoelastic surface coupled with viscoelastic media inside and outside of the surface. The linearized surface elasticity models are derived for the constant surface tension model and the Helfrich-Canham bending model for coupling with the bulk viscoelasticity. For quasi-spherical surfaces, explicit solutions are obtained for the deformation, stress-strain and relaxation behaviors under a variety of loading conditions. These solutions can be applied to extract the intrinsic surface and bulk viscoelastic properties of biological cells or cell aggregates in the indentation, electro-deformation and relaxation experiments.

  14. Geometric Modelling of Tree Roots with Different Levels of Detail

    NASA Astrophysics Data System (ADS)

    Guerrero Iñiguez, J. I.

    2017-09-01

    This paper presents a geometric approach for modelling tree roots with different Levels of Detail, suitable for analysis of the tree anchoring, potentially occupied underground space, interaction with urban elements and damage produced and taken in the built-in environment. Three types of tree roots are considered to cover several species: tap root, heart shaped root and lateral roots. Shrubs and smaller plants are not considered, however, a similar approach can be considered if the information is available for individual species. The geometrical approach considers the difficulties of modelling the actual roots, which are dynamic and almost opaque to direct observation, proposing generalized versions. For each type of root, different geometric models are considered to capture the overall shape of the root, a simplified block model, and a planar or surface projected version. Lower detail versions are considered as compatibility version for 2D systems while higher detail models are suitable for 3D analysis and visualization. The proposed levels of detail are matched with CityGML Levels of Detail, enabling both analysis and aesthetic views for urban modelling.

  15. Modeling of spray droplets deformation and breakup

    NASA Technical Reports Server (NTRS)

    Ibrahim, E. A.; Yang, H. Q.; Przekwas, A. J.

    1993-01-01

    A droplet deformation and breakup (DDB) model is proposed to study shear-type mechanism of spray droplets in pure extentional flows. A numerical solution of the DDB model equation is obtained using a fourth-order Runge-Kutta initial-value solver. The predictions of the DDB model as well as semianalytical and the Taylor analogy models are compared with the experimental data (Krzeczkowski, 1980) for shear breakup, which depict the dimensionless deformation of the drop vs dimensionless time.

  16. Three dimensional geometric modeling of processing-tomatoes

    USDA-ARS?s Scientific Manuscript database

    Characterizing tomato geometries with different shapes and sizes would facilitate the design of tomato processing equipments and promote computer-based engineering simulations. This research sought to develop a three-dimensional geometric model that can describe the morphological attributes of proce...

  17. Connectedness percolation of hard deformed rods

    NASA Astrophysics Data System (ADS)

    Drwenski, Tara; Dussi, Simone; Dijkstra, Marjolein; van Roij, René; van der Schoot, Paul

    2017-12-01

    Nanofiller particles, such as carbon nanotubes or metal wires, are used in functional polymer composites to make them conduct electricity. They are often not perfectly straight cylinders but may be tortuous or exhibit kinks. Therefore we investigate the effect of shape deformations of the rod-like nanofillers on the geometric percolation threshold of the dispersion. We do this by using connectedness percolation theory within a Parsons-Lee type of approximation, in combination with Monte Carlo integration for the average overlap volume in the isotropic fluid phase. We find that a deviation from a perfect rod-like shape has very little effect on the percolation threshold, unless the particles are strongly deformed. This demonstrates that idealized rod models are useful even for nanofillers that superficially seem imperfect. In addition, we show that for small or moderate rod deformations, the universal scaling of the percolation threshold is only weakly affected by the precise particle shape.

  18. Geometrically Nonlinear Shell Analysis of Wrinkled Thin-Film Membranes with Stress Concentrations

    NASA Technical Reports Server (NTRS)

    Tessler, Alexander; Sleight, David W.

    2006-01-01

    Geometrically nonlinear shell finite element analysis has recently been applied to solar-sail membrane problems in order to model the out-of-plane deformations due to structural wrinkling. Whereas certain problems lend themselves to achieving converged nonlinear solutions that compare favorably with experimental observations, solutions to tensioned membranes exhibiting high stress concentrations have been difficult to obtain even with the best nonlinear finite element codes and advanced shell element technology. In this paper, two numerical studies are presented that pave the way to improving the modeling of this class of nonlinear problems. The studies address the issues of mesh refinement and stress-concentration alleviation, and the effects of these modeling strategies on the ability to attain converged nonlinear deformations due to wrinkling. The numerical studies demonstrate that excessive mesh refinement in the regions of stress concentration may be disadvantageous to achieving wrinkled equilibrium states, causing the nonlinear solution to lock in the membrane response mode, while totally discarding the very low-energy bending response that is necessary to cause wrinkling deformation patterns.

  19. A higher-order theory for geometrically nonlinear analysis of composite laminates

    NASA Technical Reports Server (NTRS)

    Reddy, J. N.; Liu, C. F.

    1987-01-01

    A third-order shear deformation theory of laminated composite plates and shells is developed, the Navier solutions are derived, and its finite element models are developed. The theory allows parabolic description of the transverse shear stresses, and therefore the shear correction factors of the usual shear deformation theory are not required in the present theory. The theory also accounts for the von Karman nonlinear strains. Closed-form solutions of the theory for rectangular cross-ply and angle-ply plates and cross-ply shells are developed. The finite element model is based on independent approximations of the displacements and bending moments (i.e., mixed finite element model), and therefore, only C sup o -approximation is required. The finite element model is used to analyze cross-ply and angle-ply laminated plates and shells for bending and natural vibration. Many of the numerical results presented here should serve as references for future investigations. Three major conclusions resulted from the research: First, for thick laminates, shear deformation theories predict deflections, stresses and vibration frequencies significantly different from those predicted by classical theories. Second, even for thin laminates, shear deformation effects are significant in dynamic and geometrically nonlinear analyses. Third, the present third-order theory is more accurate compared to the classical and firt-order theories in predicting static and dynamic response of laminated plates and shells made of high-modulus composite materials.

  20. Finite element modelling of squirrel, guinea pig and rat skulls: using geometric morphometrics to assess sensitivity.

    PubMed

    Cox, P G; Fagan, M J; Rayfield, E J; Jeffery, N

    2011-12-01

    Rodents are defined by a uniquely specialized dentition and a highly complex arrangement of jaw-closing muscles. Finite element analysis (FEA) is an ideal technique to investigate the biomechanical implications of these specializations, but it is essential to understand fully the degree of influence of the different input parameters of the FE model to have confidence in the model's predictions. This study evaluates the sensitivity of FE models of rodent crania to elastic properties of the materials, loading direction, and the location and orientation of the models' constraints. Three FE models were constructed of squirrel, guinea pig and rat skulls. Each was loaded to simulate biting on the incisors, and the first and the third molars, with the angle of the incisal bite varied over a range of 45°. The Young's moduli of the bone and teeth components were varied between limits defined by findings from our own and previously published tests of material properties. Geometric morphometrics (GMM) was used to analyse the resulting skull deformations. Bone stiffness was found to have the strongest influence on the results in all three rodents, followed by bite position, and then bite angle and muscle orientation. Tooth material properties were shown to have little effect on the deformation of the skull. The effect of bite position varied between species, with the mesiodistal position of the biting tooth being most important in squirrels and guinea pigs, whereas bilateral vs. unilateral biting had the greatest influence in rats. A GMM analysis of isolated incisor deformations showed that, for all rodents, bite angle is the most important parameter, followed by elastic properties of the tooth. The results here elucidate which input parameters are most important when defining the FE models, but also provide interesting glimpses of the biomechanical differences between the three skulls, which will be fully explored in future publications. © 2011 The Authors. Journal of

  1. Controllable helical deformations on printed anisotropic composite soft actuators

    NASA Astrophysics Data System (ADS)

    Wang, Dong; Li, Ling; Serjouei, Ahmad; Dong, Longteng; Weeger, Oliver; Gu, Guoying; Ge, Qi

    2018-04-01

    Helical shapes are ubiquitous in both nature and engineering. However, the development of soft actuators and robots that mimic helical motions has been hindered primarily due to the lack of efficient modeling approaches that take into account the material anisotropy and the directional change of the external loading point. In this work, we present a theoretical framework for modeling controllable helical deformations of cable-driven, anisotropic, soft composite actuators. The framework is based on the minimum potential energy method, and its model predictions are validated by experiments, where the microarchitectures of the soft composite actuators can be precisely defined by 3D printing. We use the developed framework to investigate the effects of material and geometric parameters on helical deformations. The results show that material stiffness, volume fraction, layer thickness, and fiber orientation can be used to control the helical deformation of a soft actuator. In particular, we found that a critical fiber orientation angle exists at which the twist of the actuator changes the direction. Thus, this work can be of great importance for the design and fabrication of soft actuators with tailored deformation behavior.

  2. Heterogeneous Deformable Modeling of Bio-Tissues and Haptic Force Rendering for Bio-Object Modeling

    NASA Astrophysics Data System (ADS)

    Lin, Shiyong; Lee, Yuan-Shin; Narayan, Roger J.

    This paper presents a novel technique for modeling soft biological tissues as well as the development of an innovative interface for bio-manufacturing and medical applications. Heterogeneous deformable models may be used to represent the actual internal structures of deformable biological objects, which possess multiple components and nonuniform material properties. Both heterogeneous deformable object modeling and accurate haptic rendering can greatly enhance the realism and fidelity of virtual reality environments. In this paper, a tri-ray node snapping algorithm is proposed to generate a volumetric heterogeneous deformable model from a set of object interface surfaces between different materials. A constrained local static integration method is presented for simulating deformation and accurate force feedback based on the material properties of a heterogeneous structure. Biological soft tissue modeling is used as an example to demonstrate the proposed techniques. By integrating the heterogeneous deformable model into a virtual environment, users can both observe different materials inside a deformable object as well as interact with it by touching the deformable object using a haptic device. The presented techniques can be used for surgical simulation, bio-product design, bio-manufacturing, and medical applications.

  3. Studying physical properties of deformed intact and fractured rocks by micro-scale hydro-mechanical-seismicity model

    NASA Astrophysics Data System (ADS)

    Raziperchikolaee, Samin

    The pore pressure variation in an underground formation during hydraulic stimulation of low permeability formations or CO2 sequestration into saline aquifers can induce microseismicity due to fracture generation or pre-existing fracture activation. While the analysis of microseismic data mainly focuses on mapping the location of fractures, the seismic waves generated by the microseismic events also contain information for understanding of fracture mechanisms based on microseismic source analysis. We developed a micro-scale geomechanics, fluid-flow and seismic model that can predict transport and seismic source behavior during rock failure. This model features the incorporation of microseismic source analysis in fractured and intact rock transport properties during possible rock damage and failure. The modeling method considers comprehensive grains and cements interaction through a bonded-particle-model. As a result of grain deformation and microcrack development in the rock sample, forces and displacements in the grains involved in the bond breakage are measured to determine seismic moment tensor. In addition, geometric description of the complex pore structure is regenerated to predict fluid flow behavior of fractured samples. Numerical experiments are conducted for different intact and fractured digital rock samples, representing various mechanical behaviors of rocks and fracture surface properties, to consider their roles on seismic and transport properties of rocks during deformation. Studying rock deformation in detail provides an opportunity to understand the relationship between source mechanism of microseismic events and transport properties of damaged rocks to have a better characterizing of fluid flow behavior in subsurface formations.

  4. Deformed coset models from gauged WZW actions

    NASA Astrophysics Data System (ADS)

    Park, Q.-Han

    1994-06-01

    A general Lagrangian formulation of integrably deformed G/H-coset models is given. We consider the G/H-coset model in terms of the gauged Wess-Zumino-Witten action and obtain an integrable deformation by adding a potential energy term Tr(gTg -1overlineT) , where algebra elements T, overlineT belong to the center of the algebra h associated with the subgroup H. We show that the classical equation of motion of the deformed coset model can be identified with the integrability condition of certain linear equations which makes the use of the inverse scattering method possible. Using the linear equation, we give a systematic way to construct infinitely many conserved currents as well as soliton solutions. In the case of the parafermionic SU(2)/U(1)-coset model, we derive n-solitons and conserved currents explicitly.

  5. Analysis of Initial Cell Spreading Using Mechanistic Contact Formulations for a Deformable Cell Model

    PubMed Central

    Odenthal, Tim; Smeets, Bart; Van Liedekerke, Paul; Tijskens, Engelbert; Van Oosterwyck, Hans; Ramon, Herman

    2013-01-01

    Adhesion governs to a large extent the mechanical interaction between a cell and its microenvironment. As initial cell spreading is purely adhesion driven, understanding this phenomenon leads to profound insight in both cell adhesion and cell-substrate interaction. It has been found that across a wide variety of cell types, initial spreading behavior universally follows the same power laws. The simplest cell type providing this scaling of the radius of the spreading area with time are modified red blood cells (RBCs), whose elastic responses are well characterized. Using a mechanistic description of the contact interaction between a cell and its substrate in combination with a deformable RBC model, we are now able to investigate in detail the mechanisms behind this universal power law. The presented model suggests that the initial slope of the spreading curve with time results from a purely geometrical effect facilitated mainly by dissipation upon contact. Later on, the spreading rate decreases due to increasing tension and dissipation in the cell's cortex as the cell spreads more and more. To reproduce this observed initial spreading, no irreversible deformations are required. Since the model created in this effort is extensible to more complex cell types and can cope with arbitrarily shaped, smooth mechanical microenvironments of the cells, it can be useful for a wide range of investigations where forces at the cell boundary play a decisive role. PMID:24146605

  6. A geometric exploration of stress in deformed liquid foams

    NASA Astrophysics Data System (ADS)

    Evans, Myfanwy E.; Schröder-Turk, Gerd E.; Kraynik, Andrew M.

    2017-03-01

    We explore an alternate way of looking at the rheological response of a yield stress fluid: using discrete geometry to probe the heterogeneous distribution of stress in soap froth. We present quasi-static, uniaxial, isochoric compression and extension of three-dimensional random monodisperse soap froth in periodic boundary conditions and examine the stress and geometry that result. The stress and shape anisotropy of individual cells is quantified by Q, a scalar measure derived from the interface tensor that gauges each cell’s contribution to the global stress. Cumulatively, the spatial distribution of highly deformed cells allows us to examine how stress is internally distributed. The topology of highly deformed cells, how they arrange relative to one another in space, gives insight into the heterogeneous distribution of stress.

  7. Aeroelastic coupling of geometrically nonlinear structures and linear unsteady aerodynamics: Two formulations

    NASA Astrophysics Data System (ADS)

    Demasi, L.; Livne, E.

    2009-07-01

    Two different time domain formulations of integrating commonly used frequency-domain unsteady aerodynamic models based on a modal approach with full order finite element models for structures with geometric nonlinearities are presented. Both approaches are tailored to flight vehicle configurations where geometric stiffness effects are important but where deformations are moderate, flow is attached, and linear unsteady aerodynamic modeling is adequate, such as low aspect ratio wings or joined-wing and strut-braced wings at small to moderate angles of attack. Results obtained using the two approaches are compared using both planar and non-planar wing configurations. Sub-critical and post-flutter speeds are considered. It is demonstrated that the two methods lead to the same steady solution for the sub-critical case after the transients subside. It is also shown that the two methods predict the amplitude and frequency of limit cycle oscillation (when present) with the same accuracy.

  8. Numerical modeling of the Indo-Australian intraplate deformation

    NASA Astrophysics Data System (ADS)

    Brandon, Vincent; Royer, Jean-Yves

    2014-05-01

    The Indo-Australian plate is perhaps the best example of wide intraplate deformation within an oceanic plate. The deformation is expressed by an unusual level of intraplate seismicity, including magnitude Mw > 8 events, large-scale folding and deep faulting of the oceanic lithosphere and reactivation of extinct fracture zones. The deformation pattern and kinematic data inversions suggest that the Indo-Australian plate can be viewed as a composite plate made of three rigid component plates - India, Capricorn, Australia - separated by wide and diffuse boundaries undergoing either extensional or compressional deformation. We tested this model using the SHELLS numerical code (Kong & Bird, 1995). The Indo-Australian plate is modeled by a mesh of 5281 spherical triangular finite elements. Mesh edges parallel the major extinct fracture zones so that they can be reactivated by reducing their friction rates. Strength of the plate is defined by the age of the lithosphere and seafloor topography. Model boundary conditions are only defined by the plate velocities predicted by the rotation vectors between rigid components of the Indo-Australian plate and their neighboring plates. Since the mesh limits all belong to rigid plates with fully defined Euler vectors, no conditions are imposed on the location, extent and limits of the diffuse and deforming zones. Using MORVEL plate velocities (DeMets et al., 2010), predicted deformation patterns are very consistent with that observed. Pre-existing structures of the lithosphere play an important role in the intraplate deformation and its distribution. The Chagos Bank focuses most of the extensional deformation between the Indian and Capricorn plates. Agreement between models and observation improves by weakening fossil fracture zones relative to the surrounding crust; however only limited sections of FZ's accommodate deformation. The reactivation of the Eocene FZ's in the Central Indian Basin (CIB) and Wharton Basin (WB) explains the

  9. Geometric model from microscopic theory for nuclear absorption

    NASA Technical Reports Server (NTRS)

    John, Sarah; Townsend, Lawrence W.; Wilson, John W.; Tripathi, Ram K.

    1993-01-01

    A parameter-free geometric model for nuclear absorption is derived herein from microscopic theory. The expression for the absorption cross section in the eikonal approximation, taken in integral form, is separated into a geometric contribution that is described by an energy-dependent effective radius and two surface terms that cancel in an asymptotic series expansion. For collisions of light nuclei, an expression for the effective radius is derived from harmonic oscillator nuclear density functions. A direct extension to heavy nuclei with Woods-Saxon densities is made by identifying the equivalent half-density radius for the harmonic oscillator functions. Coulomb corrections are incorporated, and a simplified geometric form of the Bradt-Peters type is obtained. Results spanning the energy range from 1 MeV/nucleon to 1 GeV/nucleon are presented. Good agreement with experimental results is obtained.

  10. Geometric model for nuclear absorption from microscopic theory

    NASA Technical Reports Server (NTRS)

    John, S.; Townsend, L. W.; Wilson, J. W.; Tripathi, R. K.

    1993-01-01

    A parameter-free geometric model for nuclear absorption is derived from microscopic theory. The expression for the absorption cross section in the eikonal approximation taken in integral form is separated into a geometric contribution, described by an energy-dependent effective radius, and two surface terms which are shown to cancel in an asymptotic series expansion. For collisions of light nuclei, an expression for the effective radius is derived using harmonic-oscillator nuclear density functions. A direct extension to heavy nuclei with Woods-Saxon densities is made by identifying the equivalent half density radius for the harmonic-oscillator functions. Coulomb corrections are incorporated and a simplified geometric form of the Bradt-Peters type obtained. Results spanning the energy range of 1 MeV/nucleon to 1 GeV/nucleon are presented. Good agreement with experimental results are obtained.

  11. Effect of Gaussian curvature modulus on the shape of deformed hollow spherical objects.

    PubMed

    Quilliet, C; Farutin, A; Marmottant, P

    2016-06-01

    A popular description of soft membranes uses the surface curvature energy introduced by Helfrich, which includes a spontaneous curvature parameter. In this paper we show how the Helfrich formula can also be of interest for a wider class of spherical elastic surfaces, namely with shear elasticity, and likely to model other deformable hollow objects. The key point is that when a stress-free state with spherical symmetry exists before subsequent deformation, its straightforwardly determined curvature ("geometrical spontaneous curvature") differs most of the time from the Helfrich spontaneous curvature parameter that should be considered in order to have the model being correctly used. Using the geometrical curvature in a set of independent parameters unveils the role of the Gaussian curvature modulus, which appears to play on the shape of an elastic surface even though this latter is closed, contrary to what happens for surfaces without spontaneous curvature. In appendices, clues are given to apply this alternative and convenient formulation of the elastic surface model to the particular case of thin spherical shells of isotropic material (TSSIMs).

  12. Validation of geometric models for fisheye lenses

    NASA Astrophysics Data System (ADS)

    Schneider, D.; Schwalbe, E.; Maas, H.-G.

    The paper focuses on the photogrammetric investigation of geometric models for different types of optical fisheye constructions (equidistant, equisolid-angle, sterographic and orthographic projection). These models were implemented and thoroughly tested in a spatial resection and a self-calibrating bundle adjustment. For this purpose, fisheye images were taken with a Nikkor 8 mm fisheye lens on a Kodak DSC 14n Pro digital camera in a hemispherical calibration room. Both, the spatial resection and the bundle adjustment resulted in a standard deviation of unit weight of 1/10 pixel with a suitable set of simultaneous calibration parameters introduced into the camera model. The camera-lens combination was treated with all of the four basic models mentioned above. Using the same set of additional lens distortion parameters, the differences between the models can largely be compensated, delivering almost the same precision parameters. The relative object space precision obtained from the bundle adjustment was ca. 1:10 000 of the object dimensions. This value can be considered as a very satisfying result, as fisheye images generally have a lower geometric resolution as a consequence of their large field of view and also have a inferior imaging quality in comparison to most central perspective lenses.

  13. Droplet Deformation Prediction With the Droplet Deformation and Breakup Model (DDB)

    NASA Technical Reports Server (NTRS)

    Vargas, Mario

    2012-01-01

    The Droplet Deformation and Breakup Model was used to predict deformation of droplets approaching the leading edge stagnation line of an airfoil. The quasi-steady model was solved for each position along the droplet path. A program was developed to solve the non-linear, second order, ordinary differential equation that governs the model. A fourth order Runge-Kutta method was used to solve the equation. Experimental slip velocities from droplet breakup studies were used as input to the model which required slip velocity along the particle path. The center of mass displacement predictions were compared to the experimental measurements from the droplet breakup studies for droplets with radii in the range of 200 to 700 mm approaching the airfoil at 50 and 90 m/sec. The model predictions were good for the displacement of the center of mass for small and medium sized droplets. For larger droplets the model predictions did not agree with the experimental results.

  14. Contact Modelling of Large Radius Air Bending with Geometrically Exact Contact Algorithm

    NASA Astrophysics Data System (ADS)

    Vorkov, V.; Konyukhov, A.; Vandepitte, D.; Duflou, J. R.

    2016-08-01

    Usage of high-strength steels in conventional air bending is restricted due to limited bendability of these metals. Large-radius punches provide a typical approach for decreasing deformations during the bending process. However, as deflection progresses the loading scheme changes gradually. Therefore, modelling of the contact interaction is essential for an accurate description of the loading scheme. In the current contribution, the authors implemented a plane frictional contact element based on the penalty method. The geometrically exact contact algorithm is used for the penetration determination. The implementation is done using the OOFEM - open source finite element solver. In order to verify the simulation results, experiments have been conducted on a bending press brake for 4 mm Weldox 1300 with a punch radius of 30 mm and a die opening of 80 mm. The maximum error for the springback calculation is 0.87° for the bending angle of 144°. The contact interaction is a crucial part of large radius bending simulation and the implementation leads to a reliable solution for the springback angle.

  15. Modified polarized geometrical attenuation model for bidirectional reflection distribution function based on random surface microfacet theory.

    PubMed

    Liu, Hong; Zhu, Jingping; Wang, Kai

    2015-08-24

    The geometrical attenuation model given by Blinn was widely used in the geometrical optics bidirectional reflectance distribution function (BRDF) models. Blinn's geometrical attenuation model based on symmetrical V-groove assumption and ray scalar theory causes obvious inaccuracies in BRDF curves and negatives the effects of polarization. Aiming at these questions, a modified polarized geometrical attenuation model based on random surface microfacet theory is presented by combining of masking and shadowing effects and polarized effect. The p-polarized, s-polarized and unpolarized geometrical attenuation functions are given in their separate expressions and are validated with experimental data of two samples. It shows that the modified polarized geometrical attenuation function reaches better physical rationality, improves the precision of BRDF model, and widens the applications for different polarization.

  16. Deformable M-Reps for 3D Medical Image Segmentation.

    PubMed

    Pizer, Stephen M; Fletcher, P Thomas; Joshi, Sarang; Thall, Andrew; Chen, James Z; Fridman, Yonatan; Fritsch, Daniel S; Gash, Graham; Glotzer, John M; Jiroutek, Michael R; Lu, Conglin; Muller, Keith E; Tracton, Gregg; Yushkevich, Paul; Chaney, Edward L

    2003-11-01

    M-reps (formerly called DSLs) are a multiscale medial means for modeling and rendering 3D solid geometry. They are particularly well suited to model anatomic objects and in particular to capture prior geometric information effectively in deformable models segmentation approaches. The representation is based on figural models , which define objects at coarse scale by a hierarchy of figures - each figure generally a slab representing a solid region and its boundary simultaneously. This paper focuses on the use of single figure models to segment objects of relatively simple structure. A single figure is a sheet of medial atoms, which is interpolated from the model formed by a net, i.e., a mesh or chain, of medial atoms (hence the name m-reps ), each atom modeling a solid region via not only a position and a width but also a local figural frame giving figural directions and an object angle between opposing, corresponding positions on the boundary implied by the m-rep. The special capability of an m-rep is to provide spatial and orientational correspondence between an object in two different states of deformation. This ability is central to effective measurement of both geometric typicality and geometry to image match, the two terms of the objective function optimized in segmentation by deformable models. The other ability of m-reps central to effective segmentation is their ability to support segmentation at multiple levels of scale, with successively finer precision. Objects modeled by single figures are segmented first by a similarity transform augmented by object elongation, then by adjustment of each medial atom, and finally by displacing a dense sampling of the m-rep implied boundary. While these models and approaches also exist in 2D, we focus on 3D objects. The segmentation of the kidney from CT and the hippocampus from MRI serve as the major examples in this paper. The accuracy of segmentation as compared to manual, slice-by-slice segmentation is reported.

  17. Deformable M-Reps for 3D Medical Image Segmentation

    PubMed Central

    Pizer, Stephen M.; Fletcher, P. Thomas; Joshi, Sarang; Thall, Andrew; Chen, James Z.; Fridman, Yonatan; Fritsch, Daniel S.; Gash, Graham; Glotzer, John M.; Jiroutek, Michael R.; Lu, Conglin; Muller, Keith E.; Tracton, Gregg; Yushkevich, Paul; Chaney, Edward L.

    2013-01-01

    M-reps (formerly called DSLs) are a multiscale medial means for modeling and rendering 3D solid geometry. They are particularly well suited to model anatomic objects and in particular to capture prior geometric information effectively in deformable models segmentation approaches. The representation is based on figural models, which define objects at coarse scale by a hierarchy of figures – each figure generally a slab representing a solid region and its boundary simultaneously. This paper focuses on the use of single figure models to segment objects of relatively simple structure. A single figure is a sheet of medial atoms, which is interpolated from the model formed by a net, i.e., a mesh or chain, of medial atoms (hence the name m-reps), each atom modeling a solid region via not only a position and a width but also a local figural frame giving figural directions and an object angle between opposing, corresponding positions on the boundary implied by the m-rep. The special capability of an m-rep is to provide spatial and orientational correspondence between an object in two different states of deformation. This ability is central to effective measurement of both geometric typicality and geometry to image match, the two terms of the objective function optimized in segmentation by deformable models. The other ability of m-reps central to effective segmentation is their ability to support segmentation at multiple levels of scale, with successively finer precision. Objects modeled by single figures are segmented first by a similarity transform augmented by object elongation, then by adjustment of each medial atom, and finally by displacing a dense sampling of the m-rep implied boundary. While these models and approaches also exist in 2D, we focus on 3D objects. The segmentation of the kidney from CT and the hippocampus from MRI serve as the major examples in this paper. The accuracy of segmentation as compared to manual, slice-by-slice segmentation is reported. PMID

  18. Macroscopic modelling of semisolid deformation for considering segregation bands induced by shear deformation

    NASA Astrophysics Data System (ADS)

    Morita, S.; Yasuda, H.; Nagira, T.; Gourlay, C. M.; Yoshiya, M.; Sugiyama, A.

    2012-07-01

    In-situ observation was carried out to observe deformation of semi-solid Fe-2mass%C steel with 65% solid and globular morphology by X-ray radiography. Deformation was predominantly controlled by the rearrangement of globules. The solid particles were pushed into each other and rearrangement caused lower solid fraction regions to form. On the basis of the observation, a macroscopic model that introduces a normal stress acting on the solid due to collisions and rearrangement is proposed. The solid particles are treated as a non-Newtonian fluid. The stiffness parameters, which characterize the flow of the solid, are introduced. Stability of semisolid to fluctuations in solid fraction during simple shear was analysed. Shear deformation can be stably localized in the semisolid with a certain solid fraction range. The model essentially reproduces band segregation formation.

  19. Update to the conventional model for rotational deformation

    NASA Astrophysics Data System (ADS)

    Ries, J. C.; Desai, S.

    2017-12-01

    Rotational deformation (also called the "pole tide") is the deformation resulting from the centrifugal effect of polar motion on the solid earth and ocean, which manifests itself as variations in ocean heights, in the gravity field and in surface displacements. The model for rotational deformation assumes a primarily elastic response of the Earth to the centrifugal potential at the annual and Chandler periods and applies body tide Love numbers to the polar motion after removing the mean pole. The original model was conceived when the mean pole was moving (more or less) linearly, largely in response to glacial isostatic adjustment. In light of the significant variations in the mean pole due to present-day ice mass losses, an `appropriately' filtered mean pole was adopted for the conventional model, so that the longer period variations in the mean pole were not included in the rotational deformation model. However, the elastic Love numbers should be applicable to longer period variations as well, and only the secular (i.e. linear) mean pole should be removed. A model for the linear mean pole is recommended based on a linear fit to the IERS C01 time series spanning 1900 to 2015: in milliarcsec, Xp = 55.0+1.677*dt and Yp = 320.5+3.460*dt where dt=(t-t0), t0=2000.0 and assuming a year=365.25 days. The consequences of an updated model for rotational deformation for site motion and the gravity field are illustrated.

  20. The relationship between strain geometry and geometrically necessary dislocations

    NASA Astrophysics Data System (ADS)

    Hansen, Lars; Wallis, David

    2016-04-01

    The kinematics of past deformations are often a primary goal in structural analyses of strained rocks. Details of the strain geometry, in particular, can help distinguish hypotheses about large-scale tectonic phenomena. Microstructural indicators of strain geometry have been heavily utilized to investigate large-scale kinematics. However, many of the existing techniques require structures for which the initial morphology is known, and those structures must undergo the same deformation as imposed macroscopically. Many deformed rocks do not exhibit such convenient features, and therefore the strain geometry is often difficult (if not impossible) to ascertain. Alternatively, crystallographic textures contain information about the strain geometry, but the influence of strain geometry can be difficult to separate from other environmental factors that might affect slip system activity and therefore the textural evolution. Here we explore the ability for geometrically necessary dislocations to record information about the deformation geometry. It is well known that crystallographic slip due to the motion of dislocations yields macroscopic plastic strain, and the mathematics are established to relate dislocation glide on multiple slip systems to the strain tensor of a crystal. This theoretical description generally assumes that dislocations propagate across the entire crystal. However, at any point during the deformation, dislocations are present that have not fully transected the crystal, existing either as free dislocations or as dislocations organized into substructures like subgrain boundaries. These dislocations can remain in the lattice after deformation if the crystal is quenched sufficiently fast, and we hypothesize that this residual dislocation population can be linked to the plastic strain geometry in a quantitative manner. To test this hypothesis, we use high-resolution electron backscatter diffraction to measure lattice curvatures in experimentally deformed

  1. 3-D Geometric Modeling for the 21st Century.

    ERIC Educational Resources Information Center

    Ault, Holly K.

    1999-01-01

    Describes new geometric computer models used in contemporary computer-aided design (CAD) software including wire frame, surface, solid, and parametric models. Reviews their use in engineering design and discusses the impact of these new technologies on the engineering design graphics curriculum. (Author/CCM)

  2. Modelling deformation and fracture in confectionery wafers

    NASA Astrophysics Data System (ADS)

    Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon; Rasburn, John

    2015-01-01

    The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which was then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.

  3. Deformation Theory and Physics Model Building

    NASA Astrophysics Data System (ADS)

    Sternheimer, Daniel

    2006-08-01

    The mathematical theory of deformations has proved to be a powerful tool in modeling physical reality. We start with a short historical and philosophical review of the context and concentrate this rapid presentation on a few interrelated directions where deformation theory is essential in bringing a new framework - which has then to be developed using adapted tools, some of which come from the deformation aspect. Minkowskian space-time can be deformed into Anti de Sitter, where massless particles become composite (also dynamically): this opens new perspectives in particle physics, at least at the electroweak level, including prediction of new mesons. Nonlinear group representations and covariant field equations, coming from interactions, can be viewed as some deformation of their linear (free) part: recognizing this fact can provide a good framework for treating problems in this area, in particular global solutions. Last but not least, (algebras associated with) classical mechanics (and field theory) on a Poisson phase space can be deformed to (algebras associated with) quantum mechanics (and quantum field theory). That is now a frontier domain in mathematics and theoretical physics called deformation quantization, with multiple ramifications, avatars and connections in both mathematics and physics. These include representation theory, quantum groups (when considering Hopf algebras instead of associative or Lie algebras), noncommutative geometry and manifolds, algebraic geometry, number theory, and of course what is regrouped under the name of M-theory. We shall here look at these from the unifying point of view of deformation theory and refer to a limited number of papers as a starting point for further study.

  4. Corrections to the geometrical interpretation of bosonization

    NASA Astrophysics Data System (ADS)

    Steiner, Manfred; Marston, Brad

    2012-02-01

    Bosonization is a powerful approach for understanding certain strongly-correlated fermion systems, especially in one spatial dimension but also in higher dimensionsootnotetextA.Houghton, H.-J. Kwon and J. B. Marston, Adv. in Phys. 49, 141 (2000).. The method may be interpreted geometrically in terms of deformations of the Fermi surface, and the quantum operator that effects the deformations may be expressed in terms of a bilinear combination of fermion creation and annihilation operators. Alternatively the deformation operator has an approximate representation in terms of coherent states of bosonic fieldsootnotetextA. H. Castro Neto and E. Fradkin, Phys. Rev. B 49, 10877 (1994).. Calculation of the inner product of deformed Fermi surfaces within the two representations reveals corrections to the bosonic picture both in one and higher spatial dimensions. We discuss the implications of the corrections for efforts to improve the usefulness of multidimensional bosonization.

  5. Modeling of Surface Geometric Structure State After Integratedformed Milling and Finish Burnishing

    NASA Astrophysics Data System (ADS)

    Berczyński, Stefan; Grochała, Daniel; Grządziel, Zenon

    2017-06-01

    The article deals with computer-based modeling of burnishing a surface previously milled with a spherical cutter. This method of milling leaves traces, mainly asperities caused by the cutting crossfeed and cutter diameter. The burnishing process - surface plastic treatment - is accompanied by phenomena that take place right in the burnishing ball-milled surface contact zone. The authors present the method for preparing a finite element model and the methodology of tests for the assessment of height parameters of a surface geometrical structure (SGS). In the physical model the workpieces had a cuboidal shape and these dimensions: (width × height × length) 2×1×4.5 mm. As in the process of burnishing a cuboidal workpiece is affected by plastic deformations, the nonlinearities of the milled item were taken into account. The physical model of the process assumed that the burnishing ball would be rolled perpendicularly to milling cutter linear traces. The model tests included the application of three different burnishing forces: 250 N, 500 N and 1000 N. The process modeling featured the contact and pressing of a ball into the workpiece surface till the desired force was attained, then the burnishing ball was rolled along the surface section of 2 mm, and the burnishing force was gradually reduced till the ball left the contact zone. While rolling, the burnishing ball turned by a 23° angle. The cumulative diagrams depict plastic deformations of the modeled surfaces after milling and burnishing with defined force values. The roughness of idealized milled surface was calculated for the physical model under consideration, i.e. in an elementary section between profile peaks spaced at intervals of crossfeed passes, where the milling feed fwm = 0.5 mm. Also, asperities after burnishing were calculated for the same section. The differences of the obtained values fall below 20% of mean values recorded during empirical experiments. The adopted simplification in after

  6. Using the 3D active fault model to estimate the surface deformation, a study on HsinChu area, Taiwan.

    NASA Astrophysics Data System (ADS)

    Lin, Y. K.; Ke, M. C.; Ke, S. S.

    2016-12-01

    An active fault is commonly considered to be active if they have moved one or more times in the last 10,000 years and likely to have another earthquake sometime in the future. The relationship between the fault reactivation and the surface deformation after the Chi-Chi earthquake (M=7.2) in 1999 has been concerned up to now. According to the investigations of well-known disastrous earthquakes in recent years, indicated that surface deformation is controlled by the 3D fault geometric shape. Because the surface deformation may cause dangerous damage to critical infrastructures, buildings, roads, power, water and gas lines etc. Therefore it's very important to make pre-disaster risk assessment via the 3D active fault model to decrease serious economic losses, people injuries and deaths caused by large earthquake. The approaches to build up the 3D active fault model can be categorized as (1) field investigation (2) digitized profile data and (3) build the 3D modeling. In this research, we tracked the location of the fault scarp in the field first, then combined the seismic profiles (had been balanced) and historical earthquake data to build the underground fault plane model by using SKUA-GOCAD program. Finally compared the results come from trishear model (written by Richard W. Allmendinger, 2012) and PFC-3D program (Itasca) and got the calculated range of the deformation area. By analysis of the surface deformation area made from Hsin-Chu Fault, we concluded the result the damage zone is approaching 68 286m, the magnitude is 6.43, the offset is 0.6m. base on that to estimate the population casualties, building damage by the M=6.43 earthquake in Hsin-Chu area, Taiwan. In the future, in order to be applied accurately on earthquake disaster prevention, we need to consider further the groundwater effect and the soil structure interaction inducing by faulting.

  7. Modelling deformation and fracture in confectionery wafers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mohammed, Idris K.; Charalambides, Maria N.; Williams, J. Gordon

    2015-01-22

    The aim of this research is to model the deformation and fracture behaviour of brittle wafers often used in chocolate confectionary products. Three point bending and compression experiments were performed on beam and circular disc samples respectively to determine the 'apparent' stress-strain curves in bending and compression. The deformation of the wafer for both these testing types was observed in-situ within an SEM. The wafer is modeled analytically and numerically as a composite material with a core which is more porous than the skins. X-ray tomography was used to generate a three dimensional volume of the wafer microstructure which wasmore » then meshed and used for quantitative analysis. A linear elastic material model, with a damage function and element deletion, was used and the XMT generated architecture was loaded in compression. The output from the FE simulations correlates closely to the load-deflection deformation observed experimentally.« less

  8. Geometric Modeling of Cellular Materials for Additive Manufacturing in Biomedical Field: A Review.

    PubMed

    Savio, Gianpaolo; Rosso, Stefano; Meneghello, Roberto; Concheri, Gianmaria

    2018-01-01

    Advances in additive manufacturing technologies facilitate the fabrication of cellular materials that have tailored functional characteristics. The application of solid freeform fabrication techniques is especially exploited in designing scaffolds for tissue engineering. In this review, firstly, a classification of cellular materials from a geometric point of view is proposed; then, the main approaches on geometric modeling of cellular materials are discussed. Finally, an investigation on porous scaffolds fabricated by additive manufacturing technologies is pointed out. Perspectives in geometric modeling of scaffolds for tissue engineering are also proposed.

  9. Variable-intercept panel model for deformation zoning of a super-high arch dam.

    PubMed

    Shi, Zhongwen; Gu, Chongshi; Qin, Dong

    2016-01-01

    This study determines dam deformation similarity indexes based on an analysis of deformation zoning features and panel data clustering theory, with comprehensive consideration to the actual deformation law of super-high arch dams and the spatial-temporal features of dam deformation. Measurement methods of these indexes are studied. Based on the established deformation similarity criteria, the principle used to determine the number of dam deformation zones is constructed through entropy weight method. This study proposes the deformation zoning method for super-high arch dams and the implementation steps, analyzes the effect of special influencing factors of different dam zones on the deformation, introduces dummy variables that represent the special effect of dam deformation, and establishes a variable-intercept panel model for deformation zoning of super-high arch dams. Based on different patterns of the special effect in the variable-intercept panel model, two panel analysis models were established to monitor fixed and random effects of dam deformation. Hausman test method of model selection and model effectiveness assessment method are discussed. Finally, the effectiveness of established models is verified through a case study.

  10. Phase transition solutions in geometrically constrained magnetic domain wall models

    NASA Astrophysics Data System (ADS)

    Chen, Shouxin; Yang, Yisong

    2010-02-01

    Recent work on magnetic phase transition in nanoscale systems indicates that new physical phenomena, in particular, the Bloch wall width narrowing, arise as a consequence of geometrical confinement of magnetization and leads to the introduction of geometrically constrained domain wall models. In this paper, we present a systematic mathematical analysis on the existence of the solutions of the basic governing equations in such domain wall models. We show that, when the cross section of the geometric constriction is a simple step function, the solutions may be obtained by minimizing the domain wall energy over the constriction and solving the Bogomol'nyi equation outside the constriction. When the cross section and potential density are both even, we establish the existence of an odd domain wall solution realizing the phase transition process between two adjacent domain phases. When the cross section satisfies a certain integrability condition, we prove that a domain wall solution always exists which links two arbitrarily designated domain phases.

  11. Model Attitude and Deformation Measurements at the NASA Glenn Research Center

    NASA Technical Reports Server (NTRS)

    Woike, Mark R.

    2008-01-01

    The NASA Glenn Research Center is currently participating in an American Institute of Aeronautics and Astronautics (AIAA) sponsored Model Attitude and Deformation Working Group. This working group is chartered to develop a best practices document dealing with the measurement of two primary areas of wind tunnel measurements, 1) model attitude including alpha, beta and roll angle, and 2) model deformation. Model attitude is a principle variable in making aerodynamic and force measurements in a wind tunnel. Model deformation affects measured forces, moments and other measured aerodynamic parameters. The working group comprises of membership from industry, academia, and the Department of Defense (DoD). Each member of the working group gave a presentation on the methods and techniques that they are using to make model attitude and deformation measurements. This presentation covers the NASA Glenn Research Center s approach in making model attitude and deformation measurements.

  12. Calibration and Validation of Airborne InSAR Geometric Model

    NASA Astrophysics Data System (ADS)

    Chunming, Han; huadong, Guo; Xijuan, Yue; Changyong, Dou; Mingming, Song; Yanbing, Zhang

    2014-03-01

    The image registration or geo-coding is a very important step for many applications of airborne interferometric Synthetic Aperture Radar (InSAR), especially for those involving Digital Surface Model (DSM) generation, which requires an accurate knowledge of the geometry of the InSAR system. While the trajectory and attitude instabilities of the aircraft introduce severe distortions in three dimensional (3-D) geometric model. The 3-D geometrical model of an airborne SAR image depends on the SAR processor itself. Working at squinted model, i.e., with an offset angle (squint angle) of the radar beam from broadside direction, the aircraft motion instabilities may produce distortions in airborne InSAR geometric relationship, which, if not properly being compensated for during SAR imaging, may damage the image registration. The determination of locations of the SAR image depends on the irradiated topography and the exact knowledge of all signal delays: range delay and chirp delay (being adjusted by the radar operator) and internal delays which are unknown a priori. Hence, in order to obtain reliable results, these parameters must be properly calibrated. An Airborne InSAR mapping system has been developed by the Institute of Remote Sensing and Digital Earth (RADI), Chinese Academy of Sciences (CAS) to acquire three-dimensional geo-spatial data with high resolution and accuracy. To test the performance of the InSAR system, the Validation/Calibration (Val/Cal) campaign has carried out in Sichun province, south-west China, whose results will be reported in this paper.

  13. Comparison and Analysis of Geometric Correction Models of Spaceborne SAR

    PubMed Central

    Jiang, Weihao; Yu, Anxi; Dong, Zhen; Wang, Qingsong

    2016-01-01

    Following the development of synthetic aperture radar (SAR), SAR images have become increasingly common. Many researchers have conducted large studies on geolocation models, but little work has been conducted on the available models for the geometric correction of SAR images of different terrain. To address the terrain issue, four different models were compared and are described in this paper: a rigorous range-doppler (RD) model, a rational polynomial coefficients (RPC) model, a revised polynomial (PM) model and an elevation derivation (EDM) model. The results of comparisons of the geolocation capabilities of the models show that a proper model for a SAR image of a specific terrain can be determined. A solution table was obtained to recommend a suitable model for users. Three TerraSAR-X images, two ALOS-PALSAR images and one Envisat-ASAR image were used for the experiment, including flat terrain and mountain terrain SAR images as well as two large area images. Geolocation accuracies of the models for different terrain SAR images were computed and analyzed. The comparisons of the models show that the RD model was accurate but was the least efficient; therefore, it is not the ideal model for real-time implementations. The RPC model is sufficiently accurate and efficient for the geometric correction of SAR images of flat terrain, whose precision is below 0.001 pixels. The EDM model is suitable for the geolocation of SAR images of mountainous terrain, and its precision can reach 0.007 pixels. Although the PM model does not produce results as precise as the other models, its efficiency is excellent and its potential should not be underestimated. With respect to the geometric correction of SAR images over large areas, the EDM model has higher accuracy under one pixel, whereas the RPC model consumes one third of the time of the EDM model. PMID:27347973

  14. Geometric Modeling of Cellular Materials for Additive Manufacturing in Biomedical Field: A Review

    PubMed Central

    Rosso, Stefano; Meneghello, Roberto; Concheri, Gianmaria

    2018-01-01

    Advances in additive manufacturing technologies facilitate the fabrication of cellular materials that have tailored functional characteristics. The application of solid freeform fabrication techniques is especially exploited in designing scaffolds for tissue engineering. In this review, firstly, a classification of cellular materials from a geometric point of view is proposed; then, the main approaches on geometric modeling of cellular materials are discussed. Finally, an investigation on porous scaffolds fabricated by additive manufacturing technologies is pointed out. Perspectives in geometric modeling of scaffolds for tissue engineering are also proposed. PMID:29487626

  15. The on-orbit calibration of geometric parameters of the Tian-Hui 1 (TH-1) satellite

    NASA Astrophysics Data System (ADS)

    Wang, Jianrong; Wang, Renxiang; Hu, Xin; Su, Zhongbo

    2017-02-01

    The on-orbit calibration of geometric parameters is a key step in improving the location accuracy of satellite images without using Ground Control Points (GCPs). Most methods of on-orbit calibration are based on the self-calibration using additional parameters. When using additional parameters, different number of additional parameters may lead to different results. The triangulation bundle adjustment is another way to calibrate the geometric parameters of camera, which can describe the changes in each geometric parameter. When triangulation bundle adjustment method is applied to calibrate geometric parameters, a prerequisite is that the strip model can avoid systematic deformation caused by the rate of attitude changes. Concerning the stereo camera, the influence of the intersection angle should be considered during calibration. The Equivalent Frame Photo (EFP) bundle adjustment based on the Line-Matrix CCD (LMCCD) image can solve the systematic distortion of the strip model, and obtain high accuracy location without using GCPs. In this paper, the triangulation bundle adjustment is used to calibrate the geometric parameters of TH-1 satellite cameras based on LMCCD image. During the bundle adjustment, the three-line array cameras are reconstructed by adopting the principle of inverse triangulation. Finally, the geometric accuracy is validated before and after on-orbit calibration using 5 testing fields. After on-orbit calibration, the 3D geometric accuracy is improved to 11.8 m from 170 m. The results show that the location accuracy of TH-1 without using GCPs is significantly improved using the on-orbit calibration of the geometric parameters.

  16. Geometrical optics model of Mie resonances

    PubMed

    Roll; Schweiger

    2000-07-01

    The geometrical optics model of Mie resonances is presented. The ray path geometry is given and the resonance condition is discussed with special emphasis on the phase shift that the rays undergo at the surface of the dielectric sphere. On the basis of this model, approximate expressions for the positions of first-order resonances are given. Formulas for the cavity mode spacing are rederived in a simple manner. It is shown that the resonance linewidth can be calculated regarding the cavity losses. Formulas for the mode density of Mie resonances are given that account for the different width of resonances and thus may be adapted to specific experimental situations.

  17. Soft tissue deformation modelling through neural dynamics-based reaction-diffusion mechanics.

    PubMed

    Zhang, Jinao; Zhong, Yongmin; Gu, Chengfan

    2018-05-30

    Soft tissue deformation modelling forms the basis of development of surgical simulation, surgical planning and robotic-assisted minimally invasive surgery. This paper presents a new methodology for modelling of soft tissue deformation based on reaction-diffusion mechanics via neural dynamics. The potential energy stored in soft tissues due to a mechanical load to deform tissues away from their rest state is treated as the equivalent transmembrane potential energy, and it is distributed in the tissue masses in the manner of reaction-diffusion propagation of nonlinear electrical waves. The reaction-diffusion propagation of mechanical potential energy and nonrigid mechanics of motion are combined to model soft tissue deformation and its dynamics, both of which are further formulated as the dynamics of cellular neural networks to achieve real-time computational performance. The proposed methodology is implemented with a haptic device for interactive soft tissue deformation with force feedback. Experimental results demonstrate that the proposed methodology exhibits nonlinear force-displacement relationship for nonlinear soft tissue deformation. Homogeneous, anisotropic and heterogeneous soft tissue material properties can be modelled through the inherent physical properties of mass points. Graphical abstract Soft tissue deformation modelling with haptic feedback via neural dynamics-based reaction-diffusion mechanics.

  18. Mathematical models of carbon-carbon composite deformation

    NASA Astrophysics Data System (ADS)

    Golovin, N. N.; Kuvyrkin, G. N.

    2016-09-01

    Mathematical models of carbon-carbon composites (CCC) intended for describing the processes of deformation of structures produced by using CCC under high-temperature loading are considered. A phenomenological theory of CCC inelastic deformation is proposed, where such materials are considered as homogeneous ones with effective characteristics and where their high anisotropy of mechanical characteristics and different ways of resistance to extension and compression are taken into account. Micromechanical models are proposed for spatially reinforced CCC, where the difference between mechanical characteristics of components and the reinforcement scheme are taken into account. Themodel parameters are determined from the results of experiments of composite macrospecimens in the directions typical of the material. A version of endochronictype theory with several internal times "launched" for each composite component and related to some damage accumulation mechanisms is proposed for describing the inelastic deformation. Some practical examples are considered.

  19. Three-dimensional analysis of cavity wall deformation after composite restoration of masticatory teeth.

    PubMed

    Manchorova-Veleva, Neshka A

    2011-01-01

    The aim of the present work was to study the size of cavity wall deformation in eight class I and II defects after composite restoration. 1. Creating a geometric model - data on the size of the left maxillary second premolar were obtained from a routine craniofacial scanning of a 20-year-old patient with a 2,5 Dental CT scanner (General Electric), with high resolution and 0.625mm-thin slices. The contour of each of the 33 cross-sections of tooth 25 was delineated using graphics software (CorelDraw 7.0) and transferred to a specialized product for engineering design (SolidWorks Office Premium 2010, SolidWorks Corp. USA). The pulp cavity and periodontal ligament were created in the same manner and were integrated in the premolar body; 2. Generation of a finite element method - the geometric model was exported to specialized software for analysis by the finite element method - COSMOSWorks 2010, which automatically builds a 3D finite elements mesh. Based on the generated model, eight additional models of class I and II cavities with different geometries, adhesive layer and nanofilled composite restorations were constructed. The polymerization shrinkage was modelled by thermal deformation, with a negative temperature difference (cooling), corresponding to the actual volume shrinkage of the composite materials by 2.1%. In models A and B, the maximum cavity wall displacement was small - 0.014 mm and 0.015 mm, respectively. In models Al, B1, C1 and C, the displacement was at the expense of large deformation of the dental tissues. The maximum cavity wall displacements were 0.020 mm, 0.026 mm, 0.020 mm, 0.035 mm, respectively. The least cavity wall displacement was in models A2 and B2 with 0.008 mm and 0.017 mm, respectively. The least displacement resulting from cavity wall deformation is found in patient-friendly class I and II preparations. Preservation of the dental tissues reduces the risk of mechanical pressure on the dentinal lymph and the likelihood of post

  20. Spherical Viscoelastic Finite Element Model for Cascadia Interseismic Deformation

    NASA Astrophysics Data System (ADS)

    He, J.; Wang, K.; Dragert, H.; Miller, M. M.

    2003-12-01

    We have developed a 3-D spherical viscoelastic finite element model for the Cascadia subduction zone to study temporal and spatial variations of interseismic deformation. Previous 3-D viscoelastic finite element models of subduction zone earthquake cycles all use the Cartesian system, with the surface of the earth map-projected on to a horizontal plane. For earthquakes that rupture very long plate-boundary segments, such as the 1700 Cascadia, 1960 Chile, and 1964 Alaska great earthquakes, the Cartesian approach is inconvenient and less accurate. 3-D analytical solutions take into account the spherical geometry of the earth but have difficulty dealing with realistic plate boundary structure. For the new spherical finite element model, we use 27-node tri-quadratic isoparametric element. The resultant large sparse matrix system is solved by the stabilized bi-conjugate gradient method with ILUT preconditioning of fill-in level 6. Our experience suggests that lower order elements in the spherical system would result in unacceptable numerical errors unless one set of mesh lines is strictly radial. For the great Cascadia earthquake, we employ a smooth coseismic rupture model inferred from thermal data and results of tsunami models of the 1700 event, but we test different slip distances. For interseismic deformation, we use the conventional backslip approach. The contemporary deformation of the Cascadia margin consists of interseismic strain accumulation and a geological secular motion that can be described by a rotation of the forearc relative to North America. To isolate the interseismic deformation, we remove the secular motion from both the model formulation and geodetic data. The model predicts decreasing margin-normal shortening rates throughout the interseismic period as a result of stress relaxation in the viscoelastic mantle. The rate of decrease depends on the assumed mantle viscosity. With a viscosity of 1019 Pa s, model surface deformation at 300 years after

  1. Performance analysis of smart laminated composite plate integrated with distributed AFC material undergoing geometrically nonlinear transient vibrations

    NASA Astrophysics Data System (ADS)

    Shivakumar, J.; Ashok, M. H.; Khadakbhavi, Vishwanath; Pujari, Sanjay; Nandurkar, Santosh

    2018-02-01

    The present work focuses on geometrically nonlinear transient analysis of laminated smart composite plates integrated with the patches of Active fiber composites (AFC) using Active constrained layer damping (ACLD) as the distributed actuators. The analysis has been carried out using generalised energy based finite element model. The coupled electromechanical finite element model is derived using Von Karman type nonlinear strain displacement relations and a first-order shear deformation theory (FSDT). Eight-node iso-parametric serendipity elements are used for discretization of the overall plate integrated with AFC patch material. The viscoelastic constrained layer is modelled using GHM method. The numerical results shows the improvement in the active damping characteristics of the laminated composite plates over the passive damping for suppressing the geometrically nonlinear transient vibrations of laminated composite plates with AFC as patch material.

  2. Wall modeled LES of wind turbine wakes with geometrical effects

    NASA Astrophysics Data System (ADS)

    Bricteux, Laurent; Benard, Pierre; Zeoli, Stephanie; Moureau, Vincent; Lartigue, Ghislain; Vire, Axelle

    2017-11-01

    This study focuses on prediction of wind turbine wakes when geometrical effects such as nacelle, tower, and built environment, are taken into account. The aim is to demonstrate the ability of a high order unstructured solver called YALES2 to perform wall modeled LES of wind turbine wake turbulence. The wind turbine rotor is modeled using an Actuator Line Model (ALM) while the geometrical details are explicitly meshed thanks to the use of an unstructured grid. As high Reynolds number flows are considered, sub-grid scale models as well as wall modeling are required. The first test case investigated concerns a wind turbine flow located in a wind tunnel that allows to validate the proposed methodology using experimental data. The second test case concerns the simulation of a wind turbine wake in a complex environment (e.g. a Building) using realistic turbulent inflow conditions.

  3. Deformed Calogero-Sutherland model and fractional quantum Hall effect

    NASA Astrophysics Data System (ADS)

    Atai, Farrokh; Langmann, Edwin

    2017-01-01

    The deformed Calogero-Sutherland (CS) model is a quantum integrable system with arbitrary numbers of two types of particles and reducing to the standard CS model in special cases. We show that a known collective field description of the CS model, which is based on conformal field theory (CFT), is actually a collective field description of the deformed CS model. This provides a natural application of the deformed CS model in Wen's effective field theory of the fractional quantum Hall effect (FQHE), with the two kinds of particles corresponding to electrons and quasi-hole excitations. In particular, we use known mathematical results about super-Jack polynomials to obtain simple explicit formulas for the orthonormal CFT basis proposed by van Elburg and Schoutens in the context of the FQHE.

  4. DeepID-Net: Deformable Deep Convolutional Neural Networks for Object Detection.

    PubMed

    Ouyang, Wanli; Zeng, Xingyu; Wang, Xiaogang; Qiu, Shi; Luo, Ping; Tian, Yonglong; Li, Hongsheng; Yang, Shuo; Wang, Zhe; Li, Hongyang; Loy, Chen Change; Wang, Kun; Yan, Junjie; Tang, Xiaoou

    2016-07-07

    In this paper, we propose deformable deep convolutional neural networks for generic object detection. This new deep learning object detection framework has innovations in multiple aspects. In the proposed new deep architecture, a new deformation constrained pooling (def-pooling) layer models the deformation of object parts with geometric constraint and penalty. A new pre-training strategy is proposed to learn feature representations more suitable for the object detection task and with good generalization capability. By changing the net structures, training strategies, adding and removing some key components in the detection pipeline, a set of models with large diversity are obtained, which significantly improves the effectiveness of model averaging. The proposed approach improves the mean averaged precision obtained by RCNN [16], which was the state-of-the-art, from 31% to 50.3% on the ILSVRC2014 detection test set. It also outperforms the winner of ILSVRC2014, GoogLeNet, by 6.1%. Detailed component-wise analysis is also provided through extensive experimental evaluation, which provides a global view for people to understand the deep learning object detection pipeline.

  5. Quantifying polymer deformation in viscoelastic turbulence: the geometric decomposition and a Riemannian approach to scalar measures

    NASA Astrophysics Data System (ADS)

    Hameduddin, Ismail; Meneveau, Charles; Zaki, Tamer; Gayme, Dennice

    2017-11-01

    We develop a new framework to quantify the fluctuating behaviour of the conformation tensor in viscoelastic turbulent flows. This framework addresses two shortcomings of the classical approach based on Reynolds decomposition: the fluctuating part of the conformation tensor is not guaranteed to be positive definite and it does not consistently represent polymer expansions and contractions about the mean. Our approach employs a geometric decomposition that yields a positive-definite fluctuating conformation tensor with a clear physical interpretation as a deformation to the mean conformation. We propose three scalar measures of this fluctuating conformation tensor, which respect the non-Euclidean Riemannian geometry of the manifold of positive-definite tensors: fluctuating polymer volume, geodesic distance from the mean, and an anisotropy measure. We use these scalar quantities to investigate drag-reduced viscoelastic turbulent channel flow. Our approach establishes a systematic method to study viscoelastic turbulence. It also uncovers interesting phenomena that are not apparent using traditional analysis tools, including a logarithmic decrease in anisotropy of the mean conformation tensor away from the wall and polymer fluctuations peaking beyond the buffer layer. This work has been partially funded by the following NSF Grants: CBET-1652244, OCE-1633124, CBET-1511937.

  6. [Three dimensional mathematical model of tooth for finite element analysis].

    PubMed

    Puskar, Tatjana; Vasiljević, Darko; Marković, Dubravka; Jevremović, Danimir; Pantelić, Dejan; Savić-Sević, Svetlana; Murić, Branka

    2010-01-01

    The mathematical model of the abutment tooth is the starting point of the finite element analysis of stress and deformation of dental structures. The simplest and easiest way is to form a model according to the literature data of dimensions and morphological characteristics of teeth. Our method is based on forming 3D models using standard geometrical forms (objects) in programmes for solid modeling. Forming the mathematical model of abutment of the second upper premolar for finite element analysis of stress and deformation of dental structures. The abutment tooth has a form of a complex geometric object. It is suitable for modeling in programs for solid modeling SolidWorks. After analysing the literature data about the morphological characteristics of teeth, we started the modeling dividing the tooth (complex geometric body) into simple geometric bodies (cylinder, cone, pyramid,...). Connecting simple geometric bodies together or substricting bodies from the basic body, we formed complex geometric body, tooth. The model is then transferred into Abaqus, a computational programme for finite element analysis. Transferring the data was done by standard file format for transferring 3D models ACIS SAT. Using the programme for solid modeling SolidWorks, we developed three models of abutment of the second maxillary premolar: the model of the intact abutment, the model of the endodontically treated tooth with two remaining cavity walls and the model of the endodontically treated tooth with two remaining walls and inserted post. Mathematical models of the abutment made according to the literature data are very similar with the real abutment and the simplifications are minimal. These models enable calculations of stress and deformation of the dental structures. The finite element analysis provides useful information in understanding biomechanical problems and gives guidance for clinical research.

  7. Spectrodirectional Investigation of a Geometric-Optical Canopy Reflectance Model by Laboratory Simulation

    NASA Astrophysics Data System (ADS)

    Stanford, Adam Christopher

    Canopy reflectance models (CRMs) can accurately estimate vegetation canopy biophysical-structural information such as Leaf Area Index (LAI) inexpensively using satellite imagery. The strict physical basis which geometric-optical CRMs employ to mathematically link canopy bidirectional reflectance and structure allows for the tangible replication of a CRM's geometric abstraction of a canopy in the laboratory, enabling robust CRM validation studies. To this end, the ULGS-2 goniometer was used to obtain multiangle, hyperspectral (Spectrodirectional) measurements of a specially-designed tangible physical model forest, developed based upon the Geometric-Optical Mutual Shadowing (GOMS) CRM, at three different canopy cover densities. GOMS forward-modelled reflectance values had high levels of agreement with ULGS-2 measurements, with obtained reflectance RMSE values ranging from 0.03% to 0.1%. Canopy structure modelled via GOMS Multiple-Forward-Mode (MFM) inversion had varying levels of success. The methods developed in this thesis can potentially be extended to more complex CRMs through the implementation of 3D printing.

  8. Global geodynamic models constrained by tectonic reconstructions including plate deformation

    NASA Astrophysics Data System (ADS)

    Gurnis, M.; Flament, N.; Spasojevic, S.; Williams, S.; Seton, M.; Müller, R. D.

    2011-12-01

    In order to investigate the effect of mantle flow on the Earth's surface, imposing the kinematics predicted by plate reconstructions in global convection models has become common practice. Such models are valuable to investigate the effect of the mantle flow beneath the lithosphere on surface topography. Changes in surface topography due to lithospheric deformation are so far not part of top-down tectonic models in which plates are treated as rigid in traditional tectonic reconstructions. We introduce a new generation of geodynamic models that are based on tectonic reconstructions with deforming plates at both passive and convergent margins. These models allow us to investigate the relationships between lithospheric deformation and mantle flow, and their combined effects on surface topography. In traditional tectonic reconstructions, continents are represented as rigid blocks that either overlap or are separated by gaps in full-fit reconstructions. Reconstructions that include a global network of topological plate polygons avoid continental overlaps and gaps, but velocities are still derived on the basis of the Euler poles for rigid blocks. To resolve these issues, we developed a series of deforming plate models using the open source plate modeling software GPlates. For a given area, our methodology requires the relative motions between major rigid continental blocks, and a definition of the regions in which continental lithosphere deformed between these blocks. We use geophysical and geological data to define the limit between rigid and deforming areas, and the deformation history of non-rigid blocks. The velocity field predicted by these reconstructions is then used as a time-dependent surface boundary condition in global 3-D geodynamic models. To incorporate the continental lithosphere in our global models, we embed compositionally distinct crust and continental lithosphere within the thermal lithosphere. We define three isostatic columns of different thickness

  9. Unified Model Deformation and Flow Transition Measurements

    NASA Technical Reports Server (NTRS)

    Burner, Alpheus W.; Liu, Tianshu; Garg, Sanjay; Bell, James H.; Morgan, Daniel G.

    1999-01-01

    The number of optical techniques that may potentially be used during a given wind tunnel test is continually growing. These include parameter sensitive paints that are sensitive to temperature or pressure, several different types of off-body and on-body flow visualization techniques, optical angle-of-attack (AoA), optical measurement of model deformation, optical techniques for determining density or velocity, and spectroscopic techniques for determining various flow field parameters. Often in the past the various optical techniques were developed independently of each other, with little or no consideration for other techniques that might also be used during a given test. Recently two optical techniques have been increasingly requested for production measurements in NASA wind tunnels. These are the video photogrammetric (or videogrammetric) technique for measuring model deformation known as the video model deformation (VMD) technique, and the parameter sensitive paints for making global pressure and temperature measurements. Considerations for, and initial attempts at, simultaneous measurements with the pressure sensitive paint (PSP) and the videogrammetric techniques have been implemented. Temperature sensitive paint (TSP) has been found to be useful for boundary-layer transition detection since turbulent boundary layers convect heat at higher rates than laminar boundary layers of comparable thickness. Transition is marked by a characteristic surface temperature change wherever there is a difference between model and flow temperatures. Recently, additional capabilities have been implemented in the target-tracking videogrammetric measurement system. These capabilities have permitted practical simultaneous measurements using parameter sensitive paint and video model deformation measurements that led to the first successful unified test with TSP for transition detection in a large production wind tunnel.

  10. Fluid-structure interaction modeling of clusters of spacecraft parachutes with modified geometric porosity

    NASA Astrophysics Data System (ADS)

    Takizawa, Kenji; Tezduyar, Tayfun E.; Boben, Joseph; Kostov, Nikolay; Boswell, Cody; Buscher, Austin

    2013-12-01

    To increase aerodynamic performance, the geometric porosity of a ringsail spacecraft parachute canopy is sometimes increased, beyond the "rings" and "sails" with hundreds of "ring gaps" and "sail slits." This creates extra computational challenges for fluid-structure interaction (FSI) modeling of clusters of such parachutes, beyond those created by the lightness of the canopy structure, geometric complexities of hundreds of gaps and slits, and the contact between the parachutes of the cluster. In FSI computation of parachutes with such "modified geometric porosity," the flow through the "windows" created by the removal of the panels and the wider gaps created by the removal of the sails cannot be accurately modeled with the Homogenized Modeling of Geometric Porosity (HMGP), which was introduced to deal with the hundreds of gaps and slits. The flow needs to be actually resolved. All these computational challenges need to be addressed simultaneously in FSI modeling of clusters of spacecraft parachutes with modified geometric porosity. The core numerical technology is the Stabilized Space-Time FSI (SSTFSI) technique, and the contact between the parachutes is handled with the Surface-Edge-Node Contact Tracking (SENCT) technique. In the computations reported here, in addition to the SSTFSI and SENCT techniques and HMGP, we use the special techniques we have developed for removing the numerical spinning component of the parachute motion and for restoring the mesh integrity without a remesh. We present results for 2- and 3-parachute clusters with two different payload models.

  11. Geometric model for softwood transverse thermal conductivity. Part I

    Treesearch

    Hong-mei Gu; Audrey Zink-Sharp

    2005-01-01

    Thermal conductivity is a very important parameter in determining heat transfer rate and is required for developing of drying models and in industrial operations such as adhesive cure rate. Geometric models for predicting softwood thermal conductivity in the radial and tangential directions were generated in this study based on obervation and measurements of wood...

  12. A Deformable Generic 3D Model of Haptoral Anchor of Monogenean

    PubMed Central

    Teo, Bee Guan; Dhillon, Sarinder Kaur; Lim, Lee Hong Susan

    2013-01-01

    In this paper, a digital 3D model which allows for visualisation in three dimensions and interactive manipulation is explored as a tool to help us understand the structural morphology and elucidate the functions of morphological structures of fragile microorganisms which defy live studies. We developed a deformable generic 3D model of haptoral anchor of dactylogyridean monogeneans that can subsequently be deformed into different desired anchor shapes by using direct manipulation deformation technique. We used point primitives to construct the rectangular building blocks to develop our deformable 3D model. Point primitives are manually marked on a 2D illustration of an anchor on a Cartesian graph paper and a set of Cartesian coordinates for each point primitive is manually extracted from the graph paper. A Python script is then written in Blender to construct 3D rectangular building blocks based on the Cartesian coordinates. The rectangular building blocks are stacked on top or by the side of each other following their respective Cartesian coordinates of point primitive. More point primitives are added at the sites in the 3D model where more structural variations are likely to occur, in order to generate complex anchor structures. We used Catmull-Clark subdivision surface modifier to smoothen the surface and edge of the generic 3D model to obtain a smoother and more natural 3D shape and antialiasing option to reduce the jagged edges of the 3D model. This deformable generic 3D model can be deformed into different desired 3D anchor shapes through direct manipulation deformation technique by aligning the vertices (pilot points) of the newly developed deformable generic 3D model onto the 2D illustrations of the desired shapes and moving the vertices until the desire 3D shapes are formed. In this generic 3D model all the vertices present are deployed for displacement during deformation. PMID:24204903

  13. A deformable generic 3D model of haptoral anchor of Monogenean.

    PubMed

    Teo, Bee Guan; Dhillon, Sarinder Kaur; Lim, Lee Hong Susan

    2013-01-01

    In this paper, a digital 3D model which allows for visualisation in three dimensions and interactive manipulation is explored as a tool to help us understand the structural morphology and elucidate the functions of morphological structures of fragile microorganisms which defy live studies. We developed a deformable generic 3D model of haptoral anchor of dactylogyridean monogeneans that can subsequently be deformed into different desired anchor shapes by using direct manipulation deformation technique. We used point primitives to construct the rectangular building blocks to develop our deformable 3D model. Point primitives are manually marked on a 2D illustration of an anchor on a Cartesian graph paper and a set of Cartesian coordinates for each point primitive is manually extracted from the graph paper. A Python script is then written in Blender to construct 3D rectangular building blocks based on the Cartesian coordinates. The rectangular building blocks are stacked on top or by the side of each other following their respective Cartesian coordinates of point primitive. More point primitives are added at the sites in the 3D model where more structural variations are likely to occur, in order to generate complex anchor structures. We used Catmull-Clark subdivision surface modifier to smoothen the surface and edge of the generic 3D model to obtain a smoother and more natural 3D shape and antialiasing option to reduce the jagged edges of the 3D model. This deformable generic 3D model can be deformed into different desired 3D anchor shapes through direct manipulation deformation technique by aligning the vertices (pilot points) of the newly developed deformable generic 3D model onto the 2D illustrations of the desired shapes and moving the vertices until the desire 3D shapes are formed. In this generic 3D model all the vertices present are deployed for displacement during deformation.

  14. Improving Visibility of Stereo-Radiographic Spine Reconstruction with Geometric Inferences.

    PubMed

    Kumar, Sampath; Nayak, K Prabhakar; Hareesha, K S

    2016-04-01

    Complex deformities of the spine, like scoliosis, are evaluated more precisely using stereo-radiographic 3D reconstruction techniques. Primarily, it uses six stereo-corresponding points available on the vertebral body for the 3D reconstruction of each vertebra. The wireframe structure obtained in this process has poor visualization, hence difficult to diagnose. In this paper, a novel method is proposed to improve the visibility of this wireframe structure using a deformation of a generic spine model in accordance with the 3D-reconstructed corresponding points. Then, the geometric inferences like vertebral orientations are automatically extracted from the radiographs to improve the visibility of the 3D model. Biplanar radiographs are acquired from five scoliotic subjects on a specifically designed calibration bench. The stereo-corresponding point reconstruction method is used to build six-point wireframe vertebral structures and thus the entire spine model. Using the 3D spine midline and automatically extracted vertebral orientation features, a more realistic 3D spine model is generated. To validate the method, the 3D spine model is back-projected on biplanar radiographs and the error difference is computed. Though, this difference is within the error limits available in the literature, the proposed work is simple and economical. The proposed method does not require more corresponding points and image features to improve the visibility of the model. Hence, it reduces the computational complexity. Expensive 3D digitizer and vertebral CT scan models are also excluded from this study. Thus, the visibility of stereo-corresponding point reconstruction is improved to obtain a low-cost spine model for a better diagnosis of spinal deformities.

  15. Small-on-large geometric anelasticity

    PubMed Central

    2016-01-01

    In this paper, we are concerned with finding exact solutions for the stress fields of nonlinear solids with non-symmetric distributions of defects (or more generally finite eigenstrains) that are small perturbations of symmetric distributions of defects with known exact solutions. In the language of geometric mechanics, this corresponds to finding a deformation that is a result of a perturbation of the metric of the Riemannian material manifold. We present a general framework that can be used for a systematic analysis of this class of anelasticity problems. This geometric formulation can be thought of as a material analogue of the classical small-on-large theory in nonlinear elasticity. We use the present small-on-large anelasticity theory to find exact solutions for the stress fields of some non-symmetric distributions of screw dislocations in incompressible isotropic solids. PMID:27956887

  16. Compressive deformation of a single microcapsule

    NASA Astrophysics Data System (ADS)

    Liu, K. K.; Williams, D. R.; Briscoe, B. J.

    1996-12-01

    This paper reports an experimental and theoretical study of the compressive behavior of single microcapsules; that is, liquid-filled cellular entities (approximately 65 μm in diameter) with a thin polymeric membrane wall. An experimental technique which allows the simultaneous measurement of both the compressive displacement and the reaction forces of individual microcapsules deformed between two parallel plates up to a dimensionless approach [(compressive displacement)/(initial particle diameter)] of 60% is described. The corresponding major geometric parameters of the deformed microcapsule, such as central lateral extension as well as the failure phenomena, are reported and recorded through a microscopic visualization system. The elastic modulus, the bursting strength of the membrane, and the pressure difference across the membrane are computed by using a theoretical analysis which is also presented in this paper. This theoretical model, which was developed by Feng and Yang [

    J. Appl. Mech. 40, 209 (1973)
    ] and then modified by Lardner and Pujara [in
    Mechanics Today, edited by S. Nemat-Nasser (Pergamon, New York, 1980), Vol. 5
    ], considers the deformation of a nonlinear elastic spherical membrane which is filled with an incompressible fluid. The predictions of the theory are consistent with the experimental observations.

  17. String Theory: exact solutions, marginal deformations and hyperbolic spaces

    NASA Astrophysics Data System (ADS)

    Orlando, Domenico

    2006-10-01

    This thesis is almost entirely devoted to studying string theory backgrounds characterized by simple geometrical and integrability properties. The archetype of this type of system is given by Wess-Zumino-Witten models, describing string propagation in a group manifold or, equivalently, a class of conformal field theories with current algebras. We study the moduli space of such models by using truly marginal deformations. Particular emphasis is placed on asymmetric deformations that, together with the CFT description, enjoy a very nice spacetime interpretation in terms of the underlying Lie algebra. Then we take a slight detour so to deal with off-shell systems. Using a renormalization-group approach we describe the relaxation towards the symmetrical equilibrium situation. In he final chapter we consider backgrounds with Ramond-Ramond field and in particular we analyze direct products of constant-curvature spaces and find solutions with hyperbolic spaces.

  18. Galilean generalized Robertson-Walker spacetimes: A new family of Galilean geometrical models

    NASA Astrophysics Data System (ADS)

    de la Fuente, Daniel; Rubio, Rafael M.

    2018-02-01

    We introduce a new family of Galilean spacetimes, the Galilean generalized Robertson-Walker spacetimes. This new family is relevant in the context of a generalized Newton-Cartan theory. We study its geometrical structure and analyse the completeness of its inextensible free falling observers. This sort of spacetimes constitutes the local geometric model of a much wider family of spacetimes admitting certain conformal symmetry. Moreover, we find some sufficient geometric conditions which guarantee a global splitting of a Galilean spacetime as a Galilean generalized Robertson-Walker spacetime.

  19. 3D tracking of laparoscopic instruments using statistical and geometric modeling.

    PubMed

    Wolf, Rémi; Duchateau, Josselin; Cinquin, Philippe; Voros, Sandrine

    2011-01-01

    During a laparoscopic surgery, the endoscope can be manipulated by an assistant or a robot. Several teams have worked on the tracking of surgical instruments, based on methods ranging from the development of specific devices to image processing methods. We propose to exploit the instruments' insertion points, which are fixed on the patients abdominal cavity, as a geometric constraint for the localization of the instruments. A simple geometric model of a laparoscopic instrument is described, as well as a parametrization that exploits a spherical geometric grid, which offers attracting homogeneity and isotropy properties. The general architecture of our proposed approach is based on the probabilistic Condensation algorithm.

  20. Corneal biomechanical properties from air-puff corneal deformation imaging

    NASA Astrophysics Data System (ADS)

    Marcos, Susana; Kling, Sabine; Bekesi, Nandor; Dorronsoro, Carlos

    2014-02-01

    The combination of air-puff systems with real-time corneal imaging (i.e. Optical Coherence Tomography (OCT), or Scheimpflug) is a promising approach to assess the dynamic biomechanical properties of the corneal tissue in vivo. In this study we present an experimental system which, together with finite element modeling, allows measurements of corneal biomechanical properties from corneal deformation imaging, both ex vivo and in vivo. A spectral OCT instrument combined with an air puff from a non-contact tonometer in a non-collinear configuration was used to image the corneal deformation over full corneal cross-sections, as well as to obtain high speed measurements of the temporal deformation of the corneal apex. Quantitative analysis allows direct extraction of several deformation parameters, such as apex indentation across time, maximal indentation depth, temporal symmetry and peak distance at maximal deformation. The potential of the technique is demonstrated and compared to air-puff imaging with Scheimpflug. Measurements ex vivo were performed on 14 freshly enucleated porcine eyes and five human donor eyes. Measurements in vivo were performed on nine human eyes. Corneal deformation was studied as a function of Intraocular Pressure (IOP, 15-45 mmHg), dehydration, changes in corneal rigidity (produced by UV corneal cross-linking, CXL), and different boundary conditions (sclera, ocular muscles). Geometrical deformation parameters were used as input for inverse finite element simulation to retrieve the corneal dynamic elastic and viscoelastic parameters. Temporal and spatial deformation profiles were very sensitive to the IOP. CXL produced a significant reduction of the cornea indentation (1.41x), and a change in the temporal symmetry of the corneal deformation profile (1.65x), indicating a change in the viscoelastic properties with treatment. Combining air-puff with dynamic imaging and finite element modeling allows characterizing the corneal biomechanics in-vivo.

  1. Modeling plasticity by non-continuous deformation

    NASA Astrophysics Data System (ADS)

    Ben-Shmuel, Yaron; Altus, Eli

    2017-10-01

    Plasticity and failure theories are still subjects of intense research. Engineering constitutive models on the macroscale which are based on micro characteristics are very much in need. This study is motivated by the observation that continuum assumptions in plasticity in which neighbour material elements are inseparable at all-time are physically impossible, since local detachments, slips and neighbour switching must operate, i.e. non-continuous deformation. Material microstructure is modelled herein by a set of point elements (particles) interacting with their neighbours. Each particle can detach from and/or attach with its neighbours during deformation. Simulations on two- dimensional configurations subjected to uniaxial compression cycle are conducted. Stochastic heterogeneity is controlled by a single "disorder" parameter. It was found that (a) macro response resembles typical elasto-plastic behaviour; (b) plastic energy is proportional to the number of detachments; (c) residual plastic strain is proportional to the number of attachments, and (d) volume is preserved, which is consistent with macro plastic deformation. Rigid body displacements of local groups of elements are also observed. Higher disorder decreases the macro elastic moduli and increases plastic energy. Evolution of anisotropic effects is obtained with no additional parameters.

  2. Stellar Structure Models of Deformed Neutron Stars

    NASA Astrophysics Data System (ADS)

    Zubairi, Omair; Wigley, David; Weber, Fridolin

    Traditional stellar structure models of non-rotating neutron stars work under the assumption that these stars are perfect spheres. This assumption of perfect spherical symmetry is not correct if the matter inside neutron stars is described by an anisotropic model for the equation of state. Certain classes of neutron stars such as Magnetars and neutron stars which contain color-superconducting quark matter cores are expected to be deformed making them oblong spheroids. In this work, we investigate the stellar structure of these deformed neutron stars by deriving stellar structure equations in the framework of general relativity. Using a non-isotropic equation of state model, we solve these structure equations numerically in two dimensions. We calculate stellar properties such as masses and radii along with pressure profiles and investigate changes from standard spherical models.

  3. Model-based RSA of a femoral hip stem using surface and geometrical shape models.

    PubMed

    Kaptein, Bart L; Valstar, Edward R; Spoor, Cees W; Stoel, Berend C; Rozing, Piet M

    2006-07-01

    Roentgen stereophotogrammetry (RSA) is a highly accurate three-dimensional measuring technique for assessing micromotion of orthopaedic implants. A drawback is that markers have to be attached to the implant. Model-based techniques have been developed to prevent using special marked implants. We compared two model-based RSA methods with standard marker-based RSA techniques. The first model-based RSA method used surface models, and the second method used elementary geometrical shape (EGS) models. We used a commercially available stem to perform experiments with a phantom as well as reanalysis of patient RSA radiographs. The data from the phantom experiment indicated the accuracy and precision of the elementary geometrical shape model-based RSA method is equal to marker-based RSA. For model-based RSA using surface models, the accuracy is equal to the accuracy of marker-based RSA, but its precision is worse. We found no difference in accuracy and precision between the two model-based RSA techniques in clinical data. For this particular hip stem, EGS model-based RSA is a good alternative for marker-based RSA.

  4. Dynamic model of intrusion of magma and/or magmatic fluids in the large-scale deformation source of the Campi Flegrei caldera (Italy).

    NASA Astrophysics Data System (ADS)

    Crescentini, Luca; Amoruso, Antonella; Luongo, Annamaria

    2015-04-01

    The Campi Flegrei (CF) caldera is located in a densely populated area close to Naples (Southern Italy). It is renowned as a site of continual slow vertical movements. After the last eruption in 1538, the caldera generally subsided until 1969 when minor uplift occurred. In the early 1970s this uplift became significant (~1.5 m max). A further large uplift episode occurred from 1982 to 1984 (~1.8 m max), and subsequently smaller uplift episodes have occurred since then. Amoruso et al. (2014a,b) have recently shown that the CF surface deformation field from 1980 to 2013 can be decomposed into two stationary parts. Large-scale deformation can be explained by a quasi-horizontal source, oriented NW to SE and mathematically represented by a pressurized finite triaxial ellipsoid (PTE) ~4 km deep, possibly related to the injection of magma and/or magmatic fluids from a deeper magma chamber into a sill, or pressurization of interconnected (micro)cavities. Residual deformation not accounted for by PTE is confined to the Solfatara fumarolic area and can be mathematically explained by a small (point) pressurized oblate spheroid (PS) ~2 km below the Solfatara fumarolic field, that has been equated with a poroelastic response of the substratum to pore pressure increases near the injection point of hot magmatic fluids into the hydrothermal system. A satisfying feature of this double source model is that the geometric source parameters of each are constant over the period 1980-2013 with the exception of volume changes (potencies). Several papers have ascribed CF deformation to the injection of magmatic fluids at the base of the hydrothermal system. All models predict complex spatial and temporal evolution of the deformation pattern and consequently contrast with the observed deformation pattern stationarity. Also recently proposed dynamic models of sill intrusion in a shallow volcanic environment do not satisfy the observed CF deformation pattern stationarity. We have developed an

  5. Heterotic flux tubes in N=2 supersymmetric QCD with N=1 preserving deformations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shifman, M.; Yung, A.; Petersburg Nuclear Physics Institute, Gatchina, St. Petersburg 188300

    2008-06-15

    We consider non-Abelian Bogomol'nyi-Prasad-Sommerfield-saturated flux tubes (strings) in N=2 supersymmetric QCD deformed by superpotential terms of a special type breaking N=2 supersymmetry down to N=1. Previously it was believed that world sheet supersymmetry is accidentally enhanced due to the facts that N=(1,1) supersymmetry is automatically elevated up to N=(2,2) on CP(N-1) and, at the same time, there are no N=(0,2) generalizations of the bosonic CP(N-1) model. Edalati and Tong noted that the target space is in fact CP(N-1)xC rather than CP(N-1). This allowed them to suggest a heterotic N=(0,2) sigma model, with the CP(N-1) target space for bosonic fields andmore » an extra right-handed fermion which couples to the fermion fields of the N=(2,2) CP(N-1) model. We derive the heterotic N=(0,2) world sheet model directly from the bulk theory. The relation between the bulk and world sheet deformation parameters we obtain does not coincide with that suggested by Edalati and Tong at large values of the deformation parameter. For polynomial deformation superpotentials in the bulk we find nonpolynomial response in the world sheet model. We find a geometric representation for the heterotic model. Supersymmetry is proven to be spontaneously broken for small deformations (at the quantum level). This confirms Tong's conjecture. A proof valid for large deformations will be presented in the subsequent publication.« less

  6. Propagation of finite amplitude sound through turbulence: Modeling with geometrical acoustics and the parabolic approximation

    NASA Astrophysics Data System (ADS)

    Blanc-Benon, Philippe; Lipkens, Bart; Dallois, Laurent; Hamilton, Mark F.; Blackstock, David T.

    2002-01-01

    Sonic boom propagation can be affected by atmospheric turbulence. It has been shown that turbulence affects the perceived loudness of sonic booms, mainly by changing its peak pressure and rise time. The models reported here describe the nonlinear propagation of sound through turbulence. Turbulence is modeled as a set of individual realizations of a random temperature or velocity field. In the first model, linear geometrical acoustics is used to trace rays through each realization of the turbulent field. A nonlinear transport equation is then derived along each eigenray connecting the source and receiver. The transport equation is solved by a Pestorius algorithm. In the second model, the KZK equation is modified to account for the effect of a random temperature field and it is then solved numerically. Results from numerical experiments that simulate the propagation of spark-produced N waves through turbulence are presented. It is observed that turbulence decreases, on average, the peak pressure of the N waves and increases the rise time. Nonlinear distortion is less when turbulence is present than without it. The effects of random vector fields are stronger than those of random temperature fields. The location of the caustics and the deformation of the wave front are also presented. These observations confirm the results from the model experiment in which spark-produced N waves are used to simulate sonic boom propagation through a turbulent atmosphere.

  7. Propagation of finite amplitude sound through turbulence: modeling with geometrical acoustics and the parabolic approximation.

    PubMed

    Blanc-Benon, Philippe; Lipkens, Bart; Dallois, Laurent; Hamilton, Mark F; Blackstock, David T

    2002-01-01

    Sonic boom propagation can be affected by atmospheric turbulence. It has been shown that turbulence affects the perceived loudness of sonic booms, mainly by changing its peak pressure and rise time. The models reported here describe the nonlinear propagation of sound through turbulence. Turbulence is modeled as a set of individual realizations of a random temperature or velocity field. In the first model, linear geometrical acoustics is used to trace rays through each realization of the turbulent field. A nonlinear transport equation is then derived along each eigenray connecting the source and receiver. The transport equation is solved by a Pestorius algorithm. In the second model, the KZK equation is modified to account for the effect of a random temperature field and it is then solved numerically. Results from numerical experiments that simulate the propagation of spark-produced N waves through turbulence are presented. It is observed that turbulence decreases, on average, the peak pressure of the N waves and increases the rise time. Nonlinear distortion is less when turbulence is present than without it. The effects of random vector fields are stronger than those of random temperature fields. The location of the caustics and the deformation of the wave front are also presented. These observations confirm the results from the model experiment in which spark-produced N waves are used to simulate sonic boom propagation through a turbulent atmosphere.

  8. Super Yang Mills, matrix models and geometric transitions

    NASA Astrophysics Data System (ADS)

    Ferrari, Frank

    2005-03-01

    I explain two applications of the relationship between four-dimensional N=1 supersymmetric gauge theories, zero-dimensional gauged matrix models, and geometric transitions in string theory. The first is related to the spectrum of BPS domain walls or BPS branes. It is shown that one can smoothly interpolate between a D-brane state, whose weak coupling tension scales as N˜1/g, and a closed string solitonic state, whose weak coupling tension scales as N˜1/gs2. This is part of a larger theory of N=1 quantum parameter spaces. The second is a new purely geometric approach to sum exactly over planar diagrams in zero dimension. It is an example of open/closed string duality. To cite this article: F. Ferrari, C. R. Physique 6 (2005).

  9. Modeling Dynamic Helium Release as a Tracer of Rock Deformation

    DOE PAGES

    Gardner, W. Payton; Bauer, Stephen J.; Kuhlman, Kristopher L.; ...

    2017-11-03

    Here, we use helium released during mechanical deformation of shales as a signal to explore the effects of deformation and failure on material transport properties. A dynamic dual-permeability model with evolving pore and fracture networks is used to simulate gases released from shale during deformation and failure. Changes in material properties required to reproduce experimentally observed gas signals are explored. We model two different experiments of 4He flow rate measured from shale undergoing mechanical deformation, a core parallel to bedding and a core perpendicular to bedding. We also found that the helium signal is sensitive to fracture development and evolutionmore » as well as changes in the matrix transport properties. We constrain the timing and effective fracture aperture, as well as the increase in matrix porosity and permeability. Increases in matrix permeability are required to explain gas flow prior to macroscopic failure, and the short-term gas flow postfailure. Increased matrix porosity is required to match the long-term, postfailure gas flow. This model provides the first quantitative interpretation of helium release as a result of mechanical deformation. The sensitivity of this model to changes in the fracture network, as well as to matrix properties during deformation, indicates that helium release can be used as a quantitative tool to evaluate the state of stress and strain in earth materials.« less

  10. Modeling Dynamic Helium Release as a Tracer of Rock Deformation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gardner, W. Payton; Bauer, Stephen J.; Kuhlman, Kristopher L.

    Here, we use helium released during mechanical deformation of shales as a signal to explore the effects of deformation and failure on material transport properties. A dynamic dual-permeability model with evolving pore and fracture networks is used to simulate gases released from shale during deformation and failure. Changes in material properties required to reproduce experimentally observed gas signals are explored. We model two different experiments of 4He flow rate measured from shale undergoing mechanical deformation, a core parallel to bedding and a core perpendicular to bedding. We also found that the helium signal is sensitive to fracture development and evolutionmore » as well as changes in the matrix transport properties. We constrain the timing and effective fracture aperture, as well as the increase in matrix porosity and permeability. Increases in matrix permeability are required to explain gas flow prior to macroscopic failure, and the short-term gas flow postfailure. Increased matrix porosity is required to match the long-term, postfailure gas flow. This model provides the first quantitative interpretation of helium release as a result of mechanical deformation. The sensitivity of this model to changes in the fracture network, as well as to matrix properties during deformation, indicates that helium release can be used as a quantitative tool to evaluate the state of stress and strain in earth materials.« less

  11. Geometric Assortative Growth Model for Small-World Networks

    PubMed Central

    2014-01-01

    It has been shown that both humanly constructed and natural networks are often characterized by small-world phenomenon and assortative mixing. In this paper, we propose a geometrically growing model for small-world networks. The model displays both tunable small-world phenomenon and tunable assortativity. We obtain analytical solutions of relevant topological properties such as order, size, degree distribution, degree correlation, clustering, transitivity, and diameter. It is also worth noting that the model can be viewed as a generalization for an iterative construction of Farey graphs. PMID:24578661

  12. Geometric model of pseudo-distance measurement in satellite location systems

    NASA Astrophysics Data System (ADS)

    Panchuk, K. L.; Lyashkov, A. A.; Lyubchinov, E. V.

    2018-04-01

    The existing mathematical model of pseudo-distance measurement in satellite location systems does not provide a precise solution of the problem, but rather an approximate one. The existence of such inaccuracy, as well as bias in measurement of distance from satellite to receiver, results in inaccuracy level of several meters. Thereupon, relevance of refinement of the current mathematical model becomes obvious. The solution of the system of quadratic equations used in the current mathematical model is based on linearization. The objective of the paper is refinement of current mathematical model and derivation of analytical solution of the system of equations on its basis. In order to attain the objective, geometric analysis is performed; geometric interpretation of the equations is given. As a result, an equivalent system of equations, which allows analytical solution, is derived. An example of analytical solution implementation is presented. Application of analytical solution algorithm to the problem of pseudo-distance measurement in satellite location systems allows to improve the accuracy such measurements.

  13. Bounding uncertainty in volumetric geometric models for terrestrial lidar observations of ecosystems.

    PubMed

    Paynter, Ian; Genest, Daniel; Peri, Francesco; Schaaf, Crystal

    2018-04-06

    Volumetric models with known biases are shown to provide bounds for the uncertainty in estimations of volume for ecologically interesting objects, observed with a terrestrial laser scanner (TLS) instrument. Bounding cuboids, three-dimensional convex hull polygons, voxels, the Outer Hull Model and Square Based Columns (SBCs) are considered for their ability to estimate the volume of temperate and tropical trees, as well as geomorphological features such as bluffs and saltmarsh creeks. For temperate trees, supplementary geometric models are evaluated for their ability to bound the uncertainty in cylinder-based reconstructions, finding that coarser volumetric methods do not currently constrain volume meaningfully, but may be helpful with further refinement, or in hybridized models. Three-dimensional convex hull polygons consistently overestimate object volume, and SBCs consistently underestimate volume. Voxel estimations vary in their bias, due to the point density of the TLS data, and occlusion, particularly in trees. The response of the models to parametrization is analysed, observing unexpected trends in the SBC estimates for the drumlin dataset. Establishing that this result is due to the resolution of the TLS observations being insufficient to support the resolution of the geometric model, it is suggested that geometric models with predictable outcomes can also highlight data quality issues when they produce illogical results.

  14. Bounding uncertainty in volumetric geometric models for terrestrial lidar observations of ecosystems

    PubMed Central

    Genest, Daniel; Peri, Francesco; Schaaf, Crystal

    2018-01-01

    Volumetric models with known biases are shown to provide bounds for the uncertainty in estimations of volume for ecologically interesting objects, observed with a terrestrial laser scanner (TLS) instrument. Bounding cuboids, three-dimensional convex hull polygons, voxels, the Outer Hull Model and Square Based Columns (SBCs) are considered for their ability to estimate the volume of temperate and tropical trees, as well as geomorphological features such as bluffs and saltmarsh creeks. For temperate trees, supplementary geometric models are evaluated for their ability to bound the uncertainty in cylinder-based reconstructions, finding that coarser volumetric methods do not currently constrain volume meaningfully, but may be helpful with further refinement, or in hybridized models. Three-dimensional convex hull polygons consistently overestimate object volume, and SBCs consistently underestimate volume. Voxel estimations vary in their bias, due to the point density of the TLS data, and occlusion, particularly in trees. The response of the models to parametrization is analysed, observing unexpected trends in the SBC estimates for the drumlin dataset. Establishing that this result is due to the resolution of the TLS observations being insufficient to support the resolution of the geometric model, it is suggested that geometric models with predictable outcomes can also highlight data quality issues when they produce illogical results. PMID:29503722

  15. Semantic modeling of plastic deformation of polycrystalline rock

    NASA Astrophysics Data System (ADS)

    Babaie, Hassan A.; Davarpanah, Armita

    2018-02-01

    We have developed the first iteration of the Plastic Rock Deformation (PRD) ontology by modeling the semantics of a selected set of deformational processes and mechanisms that produce, reconfigure, displace, and/or consume the material components of inhomogeneous polycrystalline rocks. The PRD knowledge model also classifies and formalizes the properties (relations) that hold between instances of the dynamic physical and chemical processes and the rock components, the complex physio-chemical, mathematical, and informational concepts of the plastic rock deformation system, the measured or calculated laboratory testing conditions, experimental procedures and protocols, the state and system variables, and the empirical flow laws that define the inter-relationships among the variables. The ontology reuses classes and properties from several existing ontologies that are built for physics, chemistry, biology, and mathematics. With its flexible design, the PRD ontology is well positioned to incrementally develop into a model that more fully represents the knowledge of plastic deformation of polycrystalline rocks in the future. The domain ontology will be used to consistently annotate varied data and information related to the microstructures and the physical and chemical processes that produce them at different spatial and temporal scales in the laboratory and in the solid Earth. The PRDKB knowledge base, when built based on the ontology, will help the community of experimental structural geologists and metamorphic petrologists to coherently and uniformly distribute, discover, access, share, and use their data through automated reasoning and integration and query of heterogeneous experimental deformation data that originate from autonomous rock testing laboratories.

  16. Three-dimensional models of deformation near strike-slip faults

    USGS Publications Warehouse

    ten Brink, Uri S.; Katzman, Rafael; Lin, J.

    1996-01-01

    We use three-dimensional elastic models to help guide the kinematic interpretation of crustal deformation associated with strike-slip faults. Deformation of the brittle upper crust in the vicinity of strike-slip fault systems is modeled with the assumption that upper crustal deformation is driven by the relative plate motion in the upper mantle. The driving motion is represented by displacement that is specified on the bottom of a 15-km-thick elastic upper crust everywhere except in a zone of finite width in the vicinity of the faults, which we term the "shear zone." Stress-free basal boundary conditions are specified within the shear zone. The basal driving displacement is either pure strike slip or strike slip with a small oblique component, and the geometry of the fault system includes a single fault, several parallel faults, and overlapping en echelon faults. We examine the variations in deformation due to changes in the width of the shear zone and due to changes in the shear strength of the faults. In models with weak faults the width of the shear zone has a considerable effect on the surficial extent and amplitude of the vertical and horizontal deformation and on the amount of rotation around horizontal and vertical axes. Strong fault models have more localized deformation at the tip of the faults, and the deformation is partly distributed outside the fault zone. The dimensions of large basins along strike-slip faults, such as the Rukwa and Dead Sea basins, and the absence of uplift around pull-apart basins fit models with weak faults better than models with strong faults. Our models also suggest that the length-to-width ratio of pull-apart basins depends on the width of the shear zone and the shear strength of the faults and is not constant as previously suggested. We show that pure strike-slip motion can produce tectonic features, such as elongate half grabens along a single fault, rotated blocks at the ends of parallel faults, or extension perpendicular to

  17. Three-dimensional models of deformation near strike-slip faults

    USGS Publications Warehouse

    ten Brink, Uri S.; Katzman, Rafael; Lin, Jian

    1996-01-01

    We use three-dimensional elastic models to help guide the kinematic interpretation of crustal deformation associated with strike-slip faults. Deformation of the brittle upper crust in the vicinity of strike-slip fault systems is modeled with the assumption that upper crustal deformation is driven by the relative plate motion in the upper mantle. The driving motion is represented by displacement that is specified on the bottom of a 15-km-thick elastic upper crust everywhere except in a zone of finite width in the vicinity of the faults, which we term the “shear zone.” Stress-free basal boundary conditions are specified within the shear zone. The basal driving displacement is either pure strike slip or strike slip with a small oblique component, and the geometry of the fault system includes a single fault, several parallel faults, and overlapping en echelon faults. We examine the variations in deformation due to changes in the width of the shear zone and due to changes in the shear strength of the faults. In models with weak faults the width of the shear zone has a considerable effect on the surficial extent and amplitude of the vertical and horizontal deformation and on the amount of rotation around horizontal and vertical axes. Strong fault models have more localized deformation at the tip of the faults, and the deformation is partly distributed outside the fault zone. The dimensions of large basins along strike-slip faults, such as the Rukwa and Dead Sea basins, and the absence of uplift around pull-apart basins fit models with weak faults better than models with strong faults. Our models also suggest that the length-to-width ratio of pull-apart basins depends on the width of the shear zone and the shear strength of the faults and is not constant as previously suggested. We show that pure strike-slip motion can produce tectonic features, such as elongate half grabens along a single fault, rotated blocks at the ends of parallel faults, or extension

  18. Geometrically nonlinear transient vibrations of actively damped anti-symmetric angle ply laminated composite shallow shell using active fibre composite (AFC) actuators

    NASA Astrophysics Data System (ADS)

    Ashok, M. H.; Shivakumar, J.; Nandurkar, Santosh; Khadakbhavi, Vishwanath; Pujari, Sanjay

    2018-02-01

    In present work, the thin laminated composite shallow shell as smart structure with AFC material’s ACLD treatment is analyzed for geometrically nonlinear transient vibrations. The AFC material is used to make the constraining layer of the ACLD treatment. Golla-Hughes-McTavish (GHM) is used to model the constrained viscoelastic layer of the ACLD treatment in time domain. Along with a simple first-order shear deformation theory the Von Kármán type non-linear strain displacement relations are used for deriving this electromechanical coupled problem. A 3-dimensional finite element model of smart composite panels integrated with the ACLD treated patches has been modelled to reveal the performance of ACLD treated patches on improving the damping properties of slender anti-symmetric angle-ply laminated shallow shell, in controlling the transient vibrations which are geometrically nonlinear. The mathematical results explain that the ACLD treated patches considerably enhance the damping properties of anti-symmetric angle-ply panels undergoing geometrically nonlinear transient vibrations.

  19. Description Of Scoliotic Deformity Pattern By Harmonic Functions

    NASA Astrophysics Data System (ADS)

    Drerup, Burkhard; Hierholzer, Eberhard

    1989-04-01

    Frontal radiographs of scoliotic deformity of the spine reveal a characteristic pattern of lateral deviation, lateral tilt and axial rotation of vertebrae. In order to study interrelations between deformation parameters 478 radiographs of idiopathic scolioses, 23 of scolioses after Wilms-tumor treatment and 18 of scolioses following poliomyelitis were digitized. From these the curves of lateral deviation, tilt and rotation are calculated and fitted by Fourier series. By restriction to the first harmonic, analysis reduces to the analysis of a single phase and amplitude for each curve. Justification of this simplification will be discussed. Results provide a general geometric description of scoliotic deformity.

  20. Geometrically nonlinear resonance of higher-order shear deformable functionally graded carbon-nanotube-reinforced composite annular sector plates excited by harmonic transverse loading

    NASA Astrophysics Data System (ADS)

    Gholami, Raheb; Ansari, Reza

    2018-02-01

    This article presents an attempt to study the nonlinear resonance of functionally graded carbon-nanotube-reinforced composite (FG-CNTRC) annular sector plates excited by a uniformly distributed harmonic transverse load. To this purpose, first, the extended rule of mixture including the efficiency parameters is employed to approximately obtain the effective material properties of FG-CNTRC annular sector plates. Then, the focus is on presenting the weak form of discretized mathematical formulation of governing equations based on the variational differential quadrature (VDQ) method and Hamilton's principle. The geometric nonlinearity and shear deformation effects are considered based on the von Kármán assumptions and Reddy's third-order shear deformation plate theory, respectively. The discretization process is performed via the generalized differential quadrature (GDQ) method together with numerical differential and integral operators. Then, an efficient multi-step numerical scheme is used to obtain the nonlinear dynamic behavior of the FG-CNTRC annular sector plates near their primary resonance as the frequency-response curve. The accuracy of the present results is first verified and then a parametric study is presented to show the impacts of CNT volume fraction, CNT distribution pattern, geometry of annular sector plate and sector angle on the nonlinear frequency-response curve of FG-CNTRC annular sector plates with different edge supports.

  1. FEM modeling of postseismic deformation of poroelastic material

    NASA Astrophysics Data System (ADS)

    Kawamoto, S.; Ito, T.; Hirahara, K.

    2004-12-01

    Following a large earthquake, postseismic deformation in the focal region has been observed by GPS, leveling measurements and the other geodetic measurements. To explain the postseismic deformation, researchers have proposed and well investigated two physical mechanisms of afterslip and viscoelastic relaxation. In some cases, however, there have been observed postseismic deformation which can not be explained by these mechanisms. Therefore, another mechanism has been proposed, where the crust is treated as "poroelastic material". This concept is called "poroelasticity". In this concept, postseismic deformation is caused by pore fluid flow due to the coseismic stress redistribution. We explored, therefore, the postseismic deformation due to pore fluid flow in a poroelastic material using finite element method (FEM), which can easily handle lateral variations of hydraulic diffusivity and elastic or plastic property. We used the FEM program 'CAMBIOT3D' originally developed by Geotech. Lab. Gunma University, Japan (2003). Because this program was developed for soil mechanics, we must have modified so as to calculate deformation due to earthquake faulting. We implemented the 'split node technique' (Melosh and Refsky, 1981) to calculate the coseismic deformation. In addition to this, we modified the program to calculate the deformation taking into account the Skempton's B. This coefficient B determines what fraction of the coseismic stress due to an earthquake is allotted to pore pressure. Without Skempton's B, coseismic pore pressure becomes too large and hence postseismic deformation is calculated too large. We evaluated the postseismic deformation in a poroelastic material to show that the poroelastic deformation is quite different from that of afterslip and viscoelastic relaxation models. In this presentation, we show the postseismic deformation due to pore fluids flow in a poroelastic material and the effect of Skempton's B. Especially, we discuss what different

  2. Geometrical basis for the Standard Model

    NASA Astrophysics Data System (ADS)

    Potter, Franklin

    1994-02-01

    The robust character of the Standard Model is confirmed. Examination of its geometrical basis in three equivalent internal symmetry spaces-the unitary plane C 2, the quaternion space Q, and the real space R 4—as well as the real space R 3 uncovers mathematical properties that predict the physical properties of leptons and quarks. The finite rotational subgroups of the gauge group SU(2) L × U(1) Y generate exactly three lepton families and four quark families and reveal how quarks and leptons are related. Among the physical properties explained are the mass ratios of the six leptons and eight quarks, the origin of the left-handed preference by the weak interaction, the geometrical source of color symmetry, and the zero neutrino masses. The ( u, d) and ( c, s) quark families team together to satisfy the triangle anomaly cancellation with the electron family, while the other families pair one-to-one for cancellation. The spontaneously broken symmetry is discrete and needs no Higgs mechanism. Predictions include all massless neutrinos, the top quark at 160 GeV/ c 2, the b' quark at 80 GeV/ c 2, and the t' quark at 2600 GeV/ c 2.

  3. Computational model of deformable lenses actuated by dielectric elastomers

    NASA Astrophysics Data System (ADS)

    Lu, Tongqing; Cai, Shengqiang; Wang, Huiming; Suo, Zhigang

    2013-09-01

    A recent design of deformable lens mimics the human eye, adjusting its focal length in response to muscle-like actuation. The artificial muscle is a membrane of a dielectric elastomer subject to a voltage. Here, we calculate the coupled and inhomogeneous deformation of the lens and the dielectric elastomer actuator by formulating a nonlinear boundary-value problem. We characterize the strain-stiffening elastomer with the Gent model and describe the voltage-induced deformation using the model of ideal dielectric elastomer. The computational predictions agree well with experimental data. We use the model to explore the space of parameters, including the prestretch of the membrane, the volume of the liquid in the lens, and the size of the dielectric elastomer actuator relative to the lens. We examine how various modes of failure limit the minimum radius of curvature.

  4. Poisson-Lie duals of the η deformed symmetric space sigma model

    NASA Astrophysics Data System (ADS)

    Hoare, Ben; Seibold, Fiona K.

    2017-11-01

    Poisson-Lie dualising the η deformation of the G/H symmetric space sigma model with respect to the simple Lie group G is conjectured to give an analytic continuation of the associated λ deformed model. In this paper we investigate when the η deformed model can be dualised with respect to a subgroup G0 of G. Starting from the first-order action on the complexified group and integrating out the degrees of freedom associated to different subalgebras, we find it is possible to dualise when G0 is associated to a sub-Dynkin diagram. Additional U1 factors built from the remaining Cartan generators can also be included. The resulting construction unifies both the Poisson-Lie dual with respect to G and the complete abelian dual of the η deformation in a single framework, with the integrated algebras unimodular in both cases. We speculate that extending these results to the path integral formalism may provide an explanation for why the η deformed AdS5 × S5 superstring is not one-loop Weyl invariant, that is the couplings do not solve the equations of type IIB supergravity, yet its complete abelian dual and the λ deformed model are.

  5. Evaluation of Chemical Preparation on Insect Wing Shape for Geometric Morphometrics

    PubMed Central

    Lorenz, Camila; Suesdek, Lincoln

    2013-01-01

    Geometric morphometrics is an approach that has been increasingly applied in studies with insects. A limiting factor of this technique is that some mosquitoes have wings with dark spots or many scales, which jeopardizes the visualization of landmarks for morphometric analysis. Recently, in some studies, chemically treatment (staining) of the wings was used to improve the viewing of landmarks. In this study, we evaluated whether this method causes deformation of the wing veins and tested whether it facilitates the visualization of the most problematic landmarks. In addition, we tested whether mechanical removal of the scales was sufficient for this purpose. The results showed that the physical and chemical treatments are equally effective in improving visualization of the landmarks. The chemical method did not cause deformation of the wing. Thus, some of these treatments should be performed before beginning geometric morphometric analysis to avoid erroneous landmark digitizing. PMID:24019438

  6. Crustal deformation mechanism in southeastern Tibetan Plateau: Insights from numerical modeling

    NASA Astrophysics Data System (ADS)

    Li, Y.; Liu, S.; Chen, L.

    2017-12-01

    The Indo-Asian collision developed the complicated crustal deformation around the southeastern Tibetan plateau. Numerous models have proposed to explain the crustal deformation, but the mechanism remains controversial, especially the increasing multi-geophysics data, which demonstrate the existence of lower velocity, lower resistivity and high conductivity, implying that lower crustal flow is responsible for the crustal deformation, arguing for the lower crust flow model. To address the relations between the crust flow and the surface deformation, we employ a three-dimensional viscoelastic finite model to investigate the possible influence on the surface deformation, and discuss the stress field distribution under the model. Our preliminary results suggest that lower crustal flow plays an important role in crustal deformation in southeastern Tibetan plateau. The best fitting is achieved when the flow velocity of the lower crust is approximately 10-11 mm/a faster than that of the upper crust. Crustal rheological properties affect regional crustal deformation, when the viscosity of the middle and lower crust in the South China block reaches 1022 and 1023 Pa.s, respectively; the predicted match observations well, especially for the magnitude within the South China block. The maximum principal stress field exhibits clear zoning, gradually shifting from an approximately east-west orientation in the northern Bayan Har block to southeast in the South China block, southwest in the western Yunnan block, and a radially divergent distribution in the Middle Yunnan and Southern Yunnan blocks.

  7. Accurate, efficient, and (iso)geometrically flexible collocation methods for phase-field models

    NASA Astrophysics Data System (ADS)

    Gomez, Hector; Reali, Alessandro; Sangalli, Giancarlo

    2014-04-01

    We propose new collocation methods for phase-field models. Our algorithms are based on isogeometric analysis, a new technology that makes use of functions from computational geometry, such as, for example, Non-Uniform Rational B-Splines (NURBS). NURBS exhibit excellent approximability and controllable global smoothness, and can represent exactly most geometries encapsulated in Computer Aided Design (CAD) models. These attributes permitted us to derive accurate, efficient, and geometrically flexible collocation methods for phase-field models. The performance of our method is demonstrated by several numerical examples of phase separation modeled by the Cahn-Hilliard equation. We feel that our method successfully combines the geometrical flexibility of finite elements with the accuracy and simplicity of pseudo-spectral collocation methods, and is a viable alternative to classical collocation methods.

  8. Induced subgraph searching for geometric model fitting

    NASA Astrophysics Data System (ADS)

    Xiao, Fan; Xiao, Guobao; Yan, Yan; Wang, Xing; Wang, Hanzi

    2017-11-01

    In this paper, we propose a novel model fitting method based on graphs to fit and segment multiple-structure data. In the graph constructed on data, each model instance is represented as an induced subgraph. Following the idea of pursuing the maximum consensus, the multiple geometric model fitting problem is formulated as searching for a set of induced subgraphs including the maximum union set of vertices. After the generation and refinement of the induced subgraphs that represent the model hypotheses, the searching process is conducted on the "qualified" subgraphs. Multiple model instances can be simultaneously estimated by solving a converted problem. Then, we introduce the energy evaluation function to determine the number of model instances in data. The proposed method is able to effectively estimate the number and the parameters of model instances in data severely corrupted by outliers and noises. Experimental results on synthetic data and real images validate the favorable performance of the proposed method compared with several state-of-the-art fitting methods.

  9. From Prototypes to Caricatures: Geometrical Models for Concept Typicality

    ERIC Educational Resources Information Center

    Ameel, Eef; Storms, Gert

    2006-01-01

    In three studies, we investigated to what extent a geometrical representation in a psychological space succeeds in predicting typicality in animal, natural food and artifact concepts and whether contrast categories contribute to the prediction. In Study 1, we compared the predictive value of a family resemblance-based prototype model with a…

  10. Designing of self-deploying origami structures using geometrically misaligned crease patterns

    PubMed Central

    Saito, Kazuya; Tsukahara, Akira; Okabe, Yoji

    2016-01-01

    Usually, origami-based morphing structures are designed on the premise of ‘rigid folding’, i.e. the facets and fold lines of origami can be replaced with rigid panels and ideal hinges, respectively. From a structural mechanics viewpoint, some rigid-foldable origami models are overconstrained and have negative degrees of freedom (d.f.). In these cases, the singularity in crease patterns guarantees their rigid foldability. This study presents a new method for designing self-deploying origami using the geometrically misaligned creases. In this method, some facets are replaced by ‘holes’ such that the systems become a 1-d.f. mechanism. These perforated origami models can be folded and unfolded similar to rigid-foldable (without misalignment) models because of their d.f. focusing on the removed facets, the holes will deform according to the motion of the frame of the remaining parts. In the proposed method, these holes are filled with elastic parts and store elastic energy for self-deployment. First, a new extended rigid-folding simulation technique is proposed to estimate the deformation of the holes. Next, the proposed method is applied on arbitrary-size quadrilateral mesh origami. Finally, by using the finite-element method, the authors conduct numerical simulations and confirm the deployment capabilities of the models. PMID:26997884

  11. Designing of self-deploying origami structures using geometrically misaligned crease patterns.

    PubMed

    Saito, Kazuya; Tsukahara, Akira; Okabe, Yoji

    2016-01-01

    Usually, origami-based morphing structures are designed on the premise of 'rigid folding', i.e. the facets and fold lines of origami can be replaced with rigid panels and ideal hinges, respectively. From a structural mechanics viewpoint, some rigid-foldable origami models are overconstrained and have negative degrees of freedom (d.f.). In these cases, the singularity in crease patterns guarantees their rigid foldability. This study presents a new method for designing self-deploying origami using the geometrically misaligned creases. In this method, some facets are replaced by 'holes' such that the systems become a 1-d.f. mechanism. These perforated origami models can be folded and unfolded similar to rigid-foldable (without misalignment) models because of their d.f. focusing on the removed facets, the holes will deform according to the motion of the frame of the remaining parts. In the proposed method, these holes are filled with elastic parts and store elastic energy for self-deployment. First, a new extended rigid-folding simulation technique is proposed to estimate the deformation of the holes. Next, the proposed method is applied on arbitrary-size quadrilateral mesh origami. Finally, by using the finite-element method, the authors conduct numerical simulations and confirm the deployment capabilities of the models.

  12. Littelmann path model for geometric crystals, Whittaker functions on Lie groups and Brownian motion

    NASA Astrophysics Data System (ADS)

    Chhaibi, Reda

    2013-02-01

    Generally speaking, this thesis focuses on the interplay between the representations of Lie groups and probability theory. It subdivides into essentially three parts. In a first rather algebraic part, we construct a path model for geometric crystals in the sense of Berenstein and Kazhdan, for complex semi-simple Lie groups. We will mainly describe the algebraic structure, its natural morphisms and parameterizations. The theory of total positivity will play a particularly important role. Then, we anticipate on the probabilistic part by exhibiting a canonical measure on geometric crystals. It uses as ingredients the superpotential for the flag manifold and a measure invariant under the crystal actions. The image measure under the weight map plays the role of Duistermaat-Heckman measure. Its Laplace transform defines Whittaker functions, providing an interesting formula for all Lie groups. Then it appears clearly that Whittaker functions are to geometric crystals, what characters are to combinatorial crystals. The Littlewood-Richardson rule is also exposed. Finally we present the probabilistic approach that allows to find the canonical measure. It is based on the fundamental idea that the Wiener measure will induce the adequate measure on the algebraic structures through the path model. In the last chapter, we show how our geometric model degenerates to the continuous classical Littelmann path model and thus recover known results. For example, the canonical measure on a geometric crystal of highest weight degenerates into a uniform measure on a polytope, and recovers the parameterizations of continuous crystals.

  13. Modeling stock prices in a portfolio using multidimensional geometric brownian motion

    NASA Astrophysics Data System (ADS)

    Maruddani, Di Asih I.; Trimono

    2018-05-01

    Modeling and forecasting stock prices of public corporates are important studies in financial analysis, due to their stock price characteristics. Stocks investments give a wide variety of risks. Taking a portfolio of several stocks is one way to minimize risk. Stochastic process of single stock price movements model can be formulated in Geometric Brownian Motion (GBM) model. But for a portfolio that consist more than one corporate stock, we need an expansion of GBM Model. In this paper, we use multidimensional Geometric Brownian Motion model. This paper aims to model and forecast two stock prices in a portfolio. These are PT. Matahari Department Store Tbk and PT. Telekomunikasi Indonesia Tbk on period January 4, 2016 until April 21, 2017. The goodness of stock price forecast value is based on Mean Absolute Percentage Error (MAPE). As the results, we conclude that forecast two stock prices in a portfolio using multidimensional GBM give less MAPE than using GBM for single stock price respectively. We conclude that multidimensional GBM is more appropriate for modeling stock prices, because the price of each stock affects each other.

  14. Tilt and strain deformation induced by hydrologically active natural fractures: application to the tiltmeters installed in Sainte-Croix-aux-Mines observatory (France)

    NASA Astrophysics Data System (ADS)

    Longuevergne, Laurent; Florsch, Nicolas; Boudin, Frédéric; Oudin, Ludovic; Camerlynck, Christian

    2009-08-01

    We investigate the deformation induced by water pressure variations in hydrologically active natural fractures, and recorded by tiltmeters and strainmeters. The deformation associated with a single fracture is derived using finite-element modelling (FEM). A range in fracture geometries is explored, first to highlight the sensitivity of each geometrical parameter to the deformation, and secondly to allow transfer to observation sites. Water level variations in the fracture are then derived from a hydrological model, driven by observed rainfall, and calibrated on fracture water flow measurements. The modelling results are explicitly applied to constrain the local hydrological contribution to observations with the 100-m-long hydrostatic tiltmeter installed at Sainte-Croix-aux-Mines (France). Our study shows that well-founded physical modelling of local hydrological effect allows a substantial correction of records in observatories.

  15. Deformable human body model development

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wray, W.O.; Aida, T.

    1998-11-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). A Deformable Human Body Model (DHBM) capable of simulating a wide variety of deformation interactions between man and his environment has been developed. The model was intended to have applications in automobile safety analysis, soldier survivability studies and assistive technology development for the disabled. To date, we have demonstrated the utility of the DHBM in automobile safety analysis and are currently engaged in discussions with the U.S. military involving two additional applications. More specifically, the DHBM has beenmore » incorporated into a Virtual Safety Lab (VSL) for automobile design under contract to General Motors Corporation. Furthermore, we have won $1.8M in funding from the U.S. Army Medical Research and Material Command for development of a noninvasive intracranial pressure measurement system. The proposed research makes use of the detailed head model that is a component of the DHBM; the project duration is three years. In addition, we have been contacted by the Air Force Armstrong Aerospace Medical Research Laboratory concerning possible use of the DHBM in analyzing the loads and injury potential to pilots upon ejection from military aircraft. Current discussions with Armstrong involve possible LANL participation in a comparison between DHBM and the Air Force Articulated Total Body (ATB) model that is the current military standard.« less

  16. Computational fluid dynamics analysis of balloon-expandable coronary stents: influence of stent and vessel deformation.

    PubMed

    Martin, David M; Murphy, Eoin A; Boyle, Fergal J

    2014-08-01

    In many computational fluid dynamics (CFD) studies of stented vessel haemodynamics, the geometry of the stented vessel is described using non-deformed (NDF) geometrical models. These NDF models neglect complex physical features, such as stent and vessel deformation, which may have a major impact on the haemodynamic environment in stented coronary arteries. In this study, CFD analyses were carried out to simulate pulsatile flow conditions in both NDF and realistically-deformed (RDF) models of three stented coronary arteries. While the NDF models were completely idealised, the RDF models were obtained from nonlinear structural analyses and accounted for both stent and vessel deformation. Following the completion of the CFD analyses, major differences were observed in the time-averaged wall shear stress (TAWSS), time-averaged wall shear stress gradient (TAWSSG) and oscillatory shear index (OSI) distributions predicted on the luminal surface of the artery for the NDF and RDF models. Specifically, the inclusion of stent and vessel deformation in the CFD analyses resulted in a 32%, 30% and 31% increase in the area-weighted mean TAWSS, a 3%, 7% and 16% increase in the area-weighted mean TAWSSG and a 21%, 13% and 21% decrease in the area-weighted mean OSI for Stents A, B and C, respectively. These results suggest that stent and vessel deformation are likely to have a major impact on the haemodynamic environment in stented coronary arteries. In light of this observation, it is recommended that these features are considered in future CFD studies of stented vessel haemodynamics. Copyright © 2014 IPEM. Published by Elsevier Ltd. All rights reserved.

  17. Elastic plastic self-consistent (EPSC) modeling of plastic deformation in fayalite olivine

    DOE PAGES

    Burnley, Pamela C

    2015-07-01

    Elastic plastic self-consistent (EPSC) simulations are used to model synchrotron X-ray diffraction observations from deformation experiments on fayalite olivine using the deformation DIA apparatus. Consistent with results from other in situ diffraction studies of monomineralic polycrystals, the results show substantial variations in stress levels among grain populations. Rather than averaging the lattice reflection stresses or choosing a single reflection to determine the macroscopic stress supported by the specimen, an EPSC simulation is used to forward model diffraction data and determine a macroscopic stress that is consistent with lattice strains of all measured diffraction lines. The EPSC simulation presented here includesmore » kink band formation among the plastic deformation mechanisms in the simulation. The inclusion of kink band formation is critical to the success of the models. This study demonstrates the importance of kink band formation as an accommodation mechanism during plastic deformation of olivine as well as the utility of using EPSC models to interpret diffraction from in situ deformation experiments.« less

  18. Preliminary deformation model for National Seismic Hazard map of Indonesia

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Meilano, Irwan; Gunawan, Endra; Sarsito, Dina

    Preliminary deformation model for the Indonesia’s National Seismic Hazard (NSH) map is constructed as the block rotation and strain accumulation function at the elastic half-space. Deformation due to rigid body motion is estimated by rotating six tectonic blocks in Indonesia. The interseismic deformation due to subduction is estimated by assuming coupling on subduction interface while deformation at active fault is calculated by assuming each of the fault‘s segment slips beneath a locking depth or in combination with creeping in a shallower part. This research shows that rigid body motion dominates the deformation pattern with magnitude more than 15 mm/year, except inmore » the narrow area near subduction zones and active faults where significant deformation reach to 25 mm/year.« less

  19. Measurement of Dam Deformations: Case Study of Obruk Dam (Turkey)

    NASA Astrophysics Data System (ADS)

    Gulal, V. Engin; Alkan, R. Metin; Alkan, M. Nurullah; İlci, Veli; Ozulu, I. Murat; Tombus, F. Engin; Kose, Zafer; Aladogan, Kayhan; Sahin, Murat; Yavasoglu, Hakan; Oku, Guldane

    2016-04-01

    In the literature, there is information regarding the first deformation and displacement measurements in dams that were conducted in 1920s Switzerland. Todays, deformation measurements in the dams have gained very different functions with improvements in both measurement equipment and evaluation of measurements. Deformation measurements and analysis are among the main topics studied by scientists who take interest in the engineering measurement sciences. The Working group of Deformation Measurements and Analysis, which was established under the International Federation of Surveyors (FIG), carries out its studies and activities with regard to this subject. At the end of the 1970s, the subject of the determination of fixed points in the deformation monitoring network was one of the main subjects extensively studied. Many theories arose from this inquiry, as different institutes came to differing conclusions. In 1978, a special commission with representatives of universities has been established within the FIG 6.1 working group; this commission worked on the issue of determining a general approach to geometric deformation analysis. The results gleaned from the commission were discussed at symposiums organized by the FIG. In accordance with these studies, scientists interested in the subject have begun to work on models that investigate cause and effect relations between the effects that cause deformation and deformation. As of the scientist who interest with the issue focused on different deformation methods, another special commission was established within the FIG engineering measurements commission in order to classify deformation models and study terminology. After studying this material for a long time, the official commission report was published in 2001. In this prepared report, studies have been carried out by considering the FIG Engineering Surveying Commission's report entitled, 'MODELS AND TERMINOLOGY FOR THE ANALYSIS OF GEODETIC MONITORING OBSERVATIONS

  20. Automated landmarking and geometric characterization of the carotid siphon.

    PubMed

    Bogunović, Hrvoje; Pozo, José María; Cárdenes, Rubén; Villa-Uriol, María Cruz; Blanc, Raphaël; Piotin, Michel; Frangi, Alejandro F

    2012-05-01

    The geometry of the carotid siphon has a large variability between subjects, which has prompted its study as a potential geometric risk factor for the onset of vascular pathologies on and off the internal carotid artery (ICA). In this work, we present a methodology for an objective and extensive geometric characterization of carotid siphon parameterized by a set of anatomical landmarks. We introduce a complete and automated characterization pipeline. Starting from the segmentation of vasculature from angiographic image and its centerline extraction, we first identify ICA by characterizing vessel tree bifurcations and training a support vector machine classifier to detect ICA terminal bifurcation. On ICA centerline curve, we detect anatomical landmarks of carotid siphon by modeling it as a sequence of four bends and selecting their centers and interfaces between them. Bends are detected from the trajectory of the curvature vector expressed in the parallel transport frame of the curve. Finally, using the detected landmarks, we characterize the geometry in two complementary ways. First, with a set of local and global geometric features, known to affect hemodynamics. Second, using large deformation diffeomorphic metric curve mapping (LDDMCM) to quantify pairwise shape similarity. We processed 96 images acquired with 3D rotational angiography. ICA identification had a cross-validation success rate of 99%. Automated landmarking was validated by computing limits of agreement with the reference taken to be the locations of the manually placed landmarks averaged across multiple observers. For all but one landmark, either the bias was not statistically significant or the variability was within 50% of the inter-observer one. The subsequently computed values of geometric features and LDDMCM were commensurate to the ones obtained with manual landmarking. The characterization based on pair-wise LDDMCM proved better in classifying the carotid siphon shape classes than the one

  1. Motorizing fibres with geometric zero-energy modes

    NASA Astrophysics Data System (ADS)

    Baumann, Arthur; Sánchez-Ferrer, Antoni; Jacomine, Leandro; Martinoty, Philippe; Le Houerou, Vincent; Ziebert, Falko; Kulić, Igor M.

    2018-06-01

    Responsive materials1-3 have been used to generate structures with built-in complex geometries4-6, linear actuators7-9 and microswimmers10-12. These results suggest that complex, fully functional machines composed solely from shape-changing materials might be possible13. Nonetheless, to accomplish rotary motion in these materials still relies on the classical wheel and axle motifs. Here we explore geometric zero-energy modes to elicit rotary motion in elastic materials in the absence of a rigid wheel travelling around an axle. We show that prestrained polymer fibres closed into rings exhibit self-actuation and continuous motion when placed between two heat baths due to elastic deformations that arise from rotational-symmetry breaking around the rod's axis. Our findings illustrate a simple but robust model to create active motion in mechanically prestrained objects.

  2. A plea for geometrical order in tectonics

    NASA Astrophysics Data System (ADS)

    Schmid, Stefan

    2017-04-01

    Ever since publishing his landmark book "Folding and Fracturing of Rocks" 50 years ago John G. Ramsay (Ramsay 1967) has fascinated many of us with his stringent mathematical-geometrical approach towards analyzing finite strain in rocks, in particular what the geometry and kinematics of folding are concerned. The figures in this early book, as well as John's drawings and photographs published in later books and articles, undoubtedly also impressed many of us by their sheer aesthetic value. This book and his later work conveyed the message that rock deformation behaves in an "orderly" way, a message that is shared by many, but not all, of John's colleagues in structural geology and tectonics. This contribution is a plea for careful structural analysis and extensive fieldwork, providing the indispensable base in any attempt to go further and also understand the physics of rock deformation and geological processes at all scales. Two large-scale examples will be discussed in this respect: (1) The problem of mélanges in an ophiolite-bearing unit of the Swiss Alps (Arosa Zone) showing that careful structural analysis leads to the view that such chaotic mélanges were postulated by some authors in the absence of a carful structural analysis, and that the geometry in fact is a result of polyphase deformation, and (2) the problem of orogen scale transects of across the Alps that reflect an amazing degree of order in the stacking of diverse paleogeographical units enabling geometrical-kinematic attempts of retrodeformation and contrasting with alternative and rather "chaotic" views. Reference: Ramsay, J.G. 1967: Folding and Fracturing of Rocks. McGraw-Hill New York, 568pp.

  3. Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles

    PubMed Central

    Kononova, Olga; Snijder, Joost; Kholodov, Yaroslav; Marx, Kenneth A.; Wuite, Gijs J. L.; Roos, Wouter H.; Barsegov, Valeri

    2016-01-01

    The mechanical properties of virus capsids correlate with local conformational dynamics in the capsid structure. They also reflect the required stability needed to withstand high internal pressures generated upon genome loading and contribute to the success of important events in viral infectivity, such as capsid maturation, genome uncoating and receptor binding. The mechanical properties of biological nanoparticles are often determined from monitoring their dynamic deformations in Atomic Force Microscopy nanoindentation experiments; but a comprehensive theory describing the full range of observed deformation behaviors has not previously been described. We present a new theory for modeling dynamic deformations of biological nanoparticles, which considers the non-linear Hertzian deformation, resulting from an indenter-particle physical contact, and the bending of curved elements (beams) modeling the particle structure. The beams’ deformation beyond the critical point triggers a dynamic transition of the particle to the collapsed state. This extreme event is accompanied by a catastrophic force drop as observed in the experimental or simulated force (F)-deformation (X) spectra. The theory interprets fine features of the spectra, including the nonlinear components of the FX-curves, in terms of the Young’s moduli for Hertzian and bending deformations, and the structural damage dependent beams’ survival probability, in terms of the maximum strength and the cooperativity parameter. The theory is exemplified by successfully describing the deformation dynamics of natural nanoparticles through comparing theoretical curves with experimental force-deformation spectra for several virus particles. This approach provides a comprehensive description of the dynamic structural transitions in biological and artificial nanoparticles, which is essential for their optimal use in nanotechnology and nanomedicine applications. PMID:26821264

  4. Medial-based deformable models in nonconvex shape-spaces for medical image segmentation.

    PubMed

    McIntosh, Chris; Hamarneh, Ghassan

    2012-01-01

    We explore the application of genetic algorithms (GA) to deformable models through the proposition of a novel method for medical image segmentation that combines GA with nonconvex, localized, medial-based shape statistics. We replace the more typical gradient descent optimizer used in deformable models with GA, and the convex, implicit, global shape statistics with nonconvex, explicit, localized ones. Specifically, we propose GA to reduce typical deformable model weaknesses pertaining to model initialization, pose estimation and local minima, through the simultaneous evolution of a large number of models. Furthermore, we constrain the evolution, and thus reduce the size of the search-space, by using statistically-based deformable models whose deformations are intuitive (stretch, bulge, bend) and are driven in terms of localized principal modes of variation, instead of modes of variation across the entire shape that often fail to capture localized shape changes. Although GA are not guaranteed to achieve the global optima, our method compares favorably to the prevalent optimization techniques, convex/nonconvex gradient-based optimizers and to globally optimal graph-theoretic combinatorial optimization techniques, when applied to the task of corpus callosum segmentation in 50 mid-sagittal brain magnetic resonance images.

  5. Modelling heat and mass transfer in bread baking with mechanical deformation

    NASA Astrophysics Data System (ADS)

    Nicolas, V.; Salagnac, P.; Glouannec, P.; Ploteau, J.-P.; Jury, V.; Boillereaux, L.

    2012-11-01

    In this paper, the thermo-hydric behaviour of bread during baking is studied. A numerical model has been developed with Comsol Multiphysics© software. The model takes into account the heat and mass transfers in the bread and the phenomenon of swelling. This model predicts the evolution of temperature, moisture, gas pressure and deformation in French "baguette" during baking. Local deformation is included in equations using solid phase conservation and, global deformation is calculated using a viscous mechanic model. Boundary conditions are specified with the sole temperature model and vapour pressure estimation of the oven during baking. The model results are compared with experimental data for a classic baking. Then, the model is analysed according to physical properties of bread and solicitations for a better understanding of the interactions between different mechanisms within the porous matrix.

  6. Poisson regression models outperform the geometrical model in estimating the peak-to-trough ratio of seasonal variation: a simulation study.

    PubMed

    Christensen, A L; Lundbye-Christensen, S; Dethlefsen, C

    2011-12-01

    Several statistical methods of assessing seasonal variation are available. Brookhart and Rothman [3] proposed a second-order moment-based estimator based on the geometrical model derived by Edwards [1], and reported that this estimator is superior in estimating the peak-to-trough ratio of seasonal variation compared with Edwards' estimator with respect to bias and mean squared error. Alternatively, seasonal variation may be modelled using a Poisson regression model, which provides flexibility in modelling the pattern of seasonal variation and adjustments for covariates. Based on a Monte Carlo simulation study three estimators, one based on the geometrical model, and two based on log-linear Poisson regression models, were evaluated in regards to bias and standard deviation (SD). We evaluated the estimators on data simulated according to schemes varying in seasonal variation and presence of a secular trend. All methods and analyses in this paper are available in the R package Peak2Trough[13]. Applying a Poisson regression model resulted in lower absolute bias and SD for data simulated according to the corresponding model assumptions. Poisson regression models had lower bias and SD for data simulated to deviate from the corresponding model assumptions than the geometrical model. This simulation study encourages the use of Poisson regression models in estimating the peak-to-trough ratio of seasonal variation as opposed to the geometrical model. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

  7. A Particle Representation Model for the Deformation of Homogeneous Turbulence

    NASA Technical Reports Server (NTRS)

    Kassinos, S. C.; Reynolds, W. C.

    1996-01-01

    In simple flows, where the mean deformation rates are mild and the turbulence has time to come to equilibrium with the mean flow, the Reynolds stresses are determined by the applied strain rate. Hence in these flows, it is often adequate to use an eddy-viscosity representation. The modern family of kappa-epsilon models has been very useful in predicting near equilibrium turbulent flows, where the rms deformation rate S is small compared to the reciprocal time scale of the turbulence (epsilon/kappa). In modern engineering applications, turbulence models are quite often required to predict flows with very rapid deformations (large S kappa/epsilon). In these flows, the structure takes some time to respond and eddy viscosity models are inadequate. The response of turbulence to rapid deformations is given by rapid distortion theory (RDT). Under RDT the nonlinear effects due to turbulence-turbulence interactions are neglected in the governing equations, but even when linearized in this fashion, the governing equations are unclosed at the one-point level due to the non-locality of the pressure fluctuations.

  8. A material sensitivity study on the accuracy of deformable organ registration using linear biomechanical models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chi, Y.; Liang, J.; Yan, D.

    2006-02-15

    Model-based deformable organ registration techniques using the finite element method (FEM) have recently been investigated intensively and applied to image-guided adaptive radiotherapy (IGART). These techniques assume that human organs are linearly elastic material, and their mechanical properties are predetermined. Unfortunately, the accurate measurement of the tissue material properties is challenging and the properties usually vary between patients. A common issue is therefore the achievable accuracy of the calculation due to the limited access to tissue elastic material constants. In this study, we performed a systematic investigation on this subject based on tissue biomechanics and computer simulations to establish the relationshipsmore » between achievable registration accuracy and tissue mechanical and organ geometrical properties. Primarily we focused on image registration for three organs: rectal wall, bladder wall, and prostate. The tissue anisotropy due to orientation preference in tissue fiber alignment is captured by using an orthotropic or a transversely isotropic elastic model. First we developed biomechanical models for the rectal wall, bladder wall, and prostate using simplified geometries and investigated the effect of varying material parameters on the resulting organ deformation. Then computer models based on patient image data were constructed, and image registrations were performed. The sensitivity of registration errors was studied by perturbating the tissue material properties from their mean values while fixing the boundary conditions. The simulation results demonstrated that registration error for a subvolume increases as its distance from the boundary increases. Also, a variable associated with material stability was found to be a dominant factor in registration accuracy in the context of material uncertainty. For hollow thin organs such as rectal walls and bladder walls, the registration errors are limited. Given 30% in material

  9. Classifying geometric variability by dominant eigenmodes of deformation in regressing tumours during active breath-hold lung cancer radiotherapy

    NASA Astrophysics Data System (ADS)

    Badawi, Ahmed M.; Weiss, Elisabeth; Sleeman, William C., IV; Hugo, Geoffrey D.

    2012-01-01

    The purpose of this study is to develop and evaluate a lung tumour interfraction geometric variability classification scheme as a means to guide adaptive radiotherapy and improve measurement of treatment response. Principal component analysis (PCA) was used to generate statistical shape models of the gross tumour volume (GTV) for 12 patients with weekly breath hold CT scans. Each eigenmode of the PCA model was classified as ‘trending’ or ‘non-trending’ depending on whether its contribution to the overall GTV variability included a time trend over the treatment course. Trending eigenmodes were used to reconstruct the original semi-automatically delineated GTVs into a reduced model containing only time trends. Reduced models were compared to the original GTVs by analyzing the reconstruction error in the GTV and position. Both retrospective (all weekly images) and prospective (only the first four weekly images) were evaluated. The average volume difference from the original GTV was 4.3% ± 2.4% for the trending model. The positional variability of the GTV over the treatment course, as measured by the standard deviation of the GTV centroid, was 1.9 ± 1.4 mm for the original GTVs, which was reduced to 1.2 ± 0.6 mm for the trending-only model. In 3/13 cases, the dominant eigenmode changed class between the prospective and retrospective models. The trending-only model preserved GTV and shape relative to the original GTVs, while reducing spurious positional variability. The classification scheme appears feasible for separating types of geometric variability by time trend.

  10. Three-dimensional deformation of orthodontic brackets

    PubMed Central

    Melenka, Garrett W; Nobes, David S; Major, Paul W

    2013-01-01

    Braces are used by orthodontists to correct the misalignment of teeth in the mouth. Archwire rotation is a particular procedure used to correct tooth inclination. Wire rotation can result in deformation to the orthodontic brackets, and an orthodontic torque simulator has been designed to examine this wire–bracket interaction. An optical technique has been employed to measure the deformation due to size and geometric constraints of the orthodontic brackets. Images of orthodontic brackets are collected using a stereo microscope and two charge-coupled device cameras, and deformation of orthodontic brackets is measured using a three-dimensional digital image correlation technique. The three-dimensional deformation of orthodontic brackets will be evaluated. The repeatability of the three-dimensional digital image correlation measurement method was evaluated by performing 30 archwire rotation tests using the same bracket and archwire. Finally, five Damon 3MX and five In-Ovation R self-ligating brackets will be compared using this technique to demonstrate the effect of archwire rotation on bracket design. PMID:23762201

  11. Three-dimensional deformation of orthodontic brackets.

    PubMed

    Melenka, Garrett W; Nobes, David S; Major, Paul W; Carey, Jason P

    2013-01-01

    Braces are used by orthodontists to correct the misalignment of teeth in the mouth. Archwire rotation is a particular procedure used to correct tooth inclination. Wire rotation can result in deformation to the orthodontic brackets, and an orthodontic torque simulator has been designed to examine this wire-bracket interaction. An optical technique has been employed to measure the deformation due to size and geometric constraints of the orthodontic brackets. Images of orthodontic brackets are collected using a stereo microscope and two charge-coupled device cameras, and deformation of orthodontic brackets is measured using a three-dimensional digital image correlation technique. The three-dimensional deformation of orthodontic brackets will be evaluated. The repeatability of the three-dimensional digital image correlation measurement method was evaluated by performing 30 archwire rotation tests using the same bracket and archwire. Finally, five Damon 3MX and five In-Ovation R self-ligating brackets will be compared using this technique to demonstrate the effect of archwire rotation on bracket design.

  12. Geometric modeling of the temporal bone for cochlea implant simulation

    NASA Astrophysics Data System (ADS)

    Todd, Catherine A.; Naghdy, Fazel; O'Leary, Stephen

    2004-05-01

    The first stage in the development of a clinically valid surgical simulator for training otologic surgeons in performing cochlea implantation is presented. For this purpose, a geometric model of the temporal bone has been derived from a cadaver specimen using the biomedical image processing software package Analyze (AnalyzeDirect, Inc) and its three-dimensional reconstruction is examined. Simulator construction begins with registration and processing of a Computer Tomography (CT) medical image sequence. Important anatomical structures of the middle and inner ear are identified and segmented from each scan in a semi-automated threshold-based approach. Linear interpolation between image slices produces a three-dimensional volume dataset: the geometrical model. Artefacts are effectively eliminated using a semi-automatic seeded region-growing algorithm and unnecessary bony structures are removed. Once validated by an Ear, Nose and Throat (ENT) specialist, the model may be imported into the Reachin Application Programming Interface (API) (Reachin Technologies AB) for visual and haptic rendering associated with a virtual mastoidectomy. Interaction with the model is realized with haptics interfacing, providing the user with accurate torque and force feedback. Electrode array insertion into the cochlea will be introduced in the final stage of design.

  13. A tumor growth model with deformable ECM

    NASA Astrophysics Data System (ADS)

    Sciumè, G.; Santagiuliana, R.; Ferrari, M.; Decuzzi, P.; Schrefler, B. A.

    2014-12-01

    Existing tumor growth models based on fluid analogy for the cells do not generally include the extracellular matrix (ECM), or if present, take it as rigid. The three-fluid model originally proposed by the authors and comprising tumor cells (TC), host cells (HC), interstitial fluid (IF) and an ECM, considered up to now only a rigid ECM in the applications. This limitation is here relaxed and the deformability of the ECM is investigated in detail. The ECM is modeled as a porous solid matrix with Green-elastic and elasto-visco-plastic material behavior within a large strain approach. Jauman and Truesdell objective stress measures are adopted together with the deformation rate tensor. Numerical results are first compared with those of a reference experiment of a multicellular tumor spheroid (MTS) growing in vitro, then three different tumor cases are studied: growth of an MTS in a decellularized ECM, growth of a spheroid in the presence of host cells and growth of a melanoma. The influence of the stiffness of the ECM is evidenced and comparison with the case of a rigid ECM is made. The processes in a deformable ECM are more rapid than in a rigid ECM and the obtained growth pattern differs. The reasons for this are due to the changes in porosity induced by the tumor growth. These changes are inhibited in a rigid ECM. This enhanced computational model emphasizes the importance of properly characterizing the biomechanical behavior of the malignant mass in all its components to correctly predict its temporal and spatial pattern evolution.

  14. Galerkin projection for geometrically-exact multilayer beams allowing for ply drop-off

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Vu-Quoc, L.; Deng, H.

    1995-12-31

    Focusing on the static case in the present work, we develop a Galerkin projection of the resulting nonlinear governing equations of equilibrium for geometrically exact sandwich beams and 1-D plates developed. In the proposed theory, each layer in the beam can have different thickness and length. As such one can use the present formulation to model an important class of multilayer structures having ply drop-off. No restriction is imposed on the magnitude of the displacement field, whose continuity across the layer interfaces is exactly enforced. The layer cross section in the deformed beam is assumed to remain straight, but notmore » orthogonal to the layer centroidal line, thus shear deformation in each layer is accounted for. Also no restriction is imposed on the rotation of a layer cross section. It follows that the overall cross section in the deformed beam is continuous piecewise linear, and can be best thought of as a chain of rigid links, connected by hinges. The overall deformation of a multilayer beam can be described by the deformation of a reference layer. The unknown kinematic quantities are therefore the two displacement components of the deformed centroidal line of a reference layer, and the finite rotations of the layers. The present theory can be used to analyze large deformation in sandwich beams. Numerical examples, such as roll-up maneuver and sandwich beam with ply drop-off, which underline the salient features of the formulation are presented. Saint-Venant principle is demonstrated for very short sandwich beams. The readers are referred to the paper for detail.« less

  15. Modeling of macrosegregation caused by volumetric deformation in a coherent mushy zone

    NASA Astrophysics Data System (ADS)

    Nicolli, Lilia C.; Mo, Asbjørn; M'hamdi, Mohammed

    2005-02-01

    A two-phase volume-averaged continuum model is presented that quantifies macrosegregation formation during solidification of metallic alloys caused by deformation of the dendritic network and associated melt flow in the coherent part of the mushy zone. Also, the macrosegregation formation associated with the solidification shrinkage (inverse segregation) is taken into account. Based on experimental evidence established elsewhere, volumetric viscoplastic deformation (densification/dilatation) of the coherent dendritic network is included in the model. While the thermomechanical model previously outlined (M. M’Hamdi, A. Mo, and C.L. Martin: Metall. Mater. Trans. A, 2002, vol. 33A, pp. 2081-93) has been used to calculate the temperature and velocity fields associated with the thermally induced deformations and shrinkage driven melt flow, the solute conservation equation including both the liquid and a solid volume-averaged velocity is solved in the present study. In modeling examples, the macrosegregation formation caused by mechanically imposed as well as by thermally induced deformations has been calculated. The modeling results for an Al-4 wt pct Cu alloy indicate that even quite small volumetric strains (≈2 pct), which can be associated with thermally induced deformations, can lead to a macroscopic composition variation in the final casting comparable to that resulting from the solidification shrinkage induced melt flow. These results can be explained by the relatively large volumetric viscoplastic deformation in the coherent mush resulting from the applied constitutive model, as well as the relatively large difference in composition for the studied Al-Cu alloy in the solid and liquid phases at high solid fractions at which the deformation takes place.

  16. Use of multiscale zirconium alloy deformation models in nuclear fuel behavior analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Montgomery, Robert; Tomé, Carlos; Liu, Wenfeng

    Accurate prediction of cladding mechanical behavior is a key aspect of modeling nuclear fuel behavior, especially for conditions of pellet-cladding interaction (PCI), reactivity-initiated accidents (RIA), and loss of coolant accidents (LOCA). Current approaches to fuel performance modeling rely on empirical models for cladding creep, growth and plastic deformation, which are limited to the materials and conditions for which the models were developed. CASL has endeavored to improve upon this approach by incorporating a microstructurally-based, atomistically-informed, zirconium alloy mechanical deformation analysis capability into the BISON-CASL engineering scale fuel performance code. Specifically, the viscoplastic self-consistent (VPSC) polycrystal plasticity modeling approach, developed bymore » Lebensohn and Tome´ [2], has been coupled with BISON-CASL to represent the mechanistic material processes controlling the deformation behavior of the cladding. A critical component of VPSC is the representation of the crystallographic orientation of the grains within the matrix material and the ability to account for the role of texture on deformation. The multiscale modeling of cladding deformation mechanisms allowed by VPSC far exceed the functionality of typical semi-empirical constitutive models employed in nuclear fuel behavior codes to model irradiation growth and creep, thermal creep, or plasticity. This paper describes the implementation of an interface between VPSC and BISON-CASL and provides initial results utilizing the coupled functionality.« less

  17. Effects of Host-rock Fracturing on Elastic-deformation Source Models of Volcano Deflation.

    PubMed

    Holohan, Eoghan P; Sudhaus, Henriette; Walter, Thomas R; Schöpfer, Martin P J; Walsh, John J

    2017-09-08

    Volcanoes commonly inflate or deflate during episodes of unrest or eruption. Continuum mechanics models that assume linear elastic deformation of the Earth's crust are routinely used to invert the observed ground motions. The source(s) of deformation in such models are generally interpreted in terms of magma bodies or pathways, and thus form a basis for hazard assessment and mitigation. Using discontinuum mechanics models, we show how host-rock fracturing (i.e. non-elastic deformation) during drainage of a magma body can progressively change the shape and depth of an elastic-deformation source. We argue that this effect explains the marked spatio-temporal changes in source model attributes inferred for the March-April 2007 eruption of Piton de la Fournaise volcano, La Reunion. We find that pronounced deflation-related host-rock fracturing can: (1) yield inclined source model geometries for a horizontal magma body; (2) cause significant upward migration of an elastic-deformation source, leading to underestimation of the true magma body depth and potentially to a misinterpretation of ascending magma; and (3) at least partly explain underestimation by elastic-deformation sources of changes in sub-surface magma volume.

  18. Finite Element modelling of deformation induced by interacting volcanic sources

    NASA Astrophysics Data System (ADS)

    Pascal, Karen; Neuberg, Jürgen; Rivalta, Eleonora

    2010-05-01

    The displacement field due to magma movements in the subsurface is commonly modelled using the solutions for a point source (Mogi, 1958), a finite spherical source (McTigue, 1987), or a dislocation source (Okada, 1992) embedded in a homogeneous elastic half-space. When the magmatic system comprises more than one source, the assumption of homogeneity in the half-space is violated and several sources are combined, their respective deformation field being summed. We have investigated the effects of neglecting the interaction between sources on the surface deformation field. To do so, we calculated the vertical and horizontal displacements for models with adjacent sources and we tested them against the solutions of corresponding numerical 3D finite element models. We implemented several models combining spherical pressure sources and dislocation sources, varying their relative position. Furthermore we considered the impact of topography, loading, and magma compressibility. To quantify the discrepancies and compare the various models, we calculated the difference between analytical and numerical maximum horizontal or vertical surface displacements.We will demonstrate that for certain conditions combining analytical sources can cause an error of up to 20%. References: McTigue, D. F. (1987), Elastic Stress and Deformation Near a Finite Spherical Magma Body: Resolution of the Point Source Paradox, J. Geophys. Res. 92, 12931-12940. Mogi, K. (1958), Relations between the eruptions of various volcanoes and the deformations of the ground surfaces around them, Bull Earthquake Res Inst, Univ Tokyo 36, 99-134. Okada, Y. (1992), Internal Deformation Due to Shear and Tensile Faults in a Half-Space, Bulletin of the Seismological Society of America 82(2), 1018-1040.

  19. ChainMail based neural dynamics modeling of soft tissue deformation for surgical simulation.

    PubMed

    Zhang, Jinao; Zhong, Yongmin; Smith, Julian; Gu, Chengfan

    2017-07-20

    Realistic and real-time modeling and simulation of soft tissue deformation is a fundamental research issue in the field of surgical simulation. In this paper, a novel cellular neural network approach is presented for modeling and simulation of soft tissue deformation by combining neural dynamics of cellular neural network with ChainMail mechanism. The proposed method formulates the problem of elastic deformation into cellular neural network activities to avoid the complex computation of elasticity. The local position adjustments of ChainMail are incorporated into the cellular neural network as the local connectivity of cells, through which the dynamic behaviors of soft tissue deformation are transformed into the neural dynamics of cellular neural network. Experiments demonstrate that the proposed neural network approach is capable of modeling the soft tissues' nonlinear deformation and typical mechanical behaviors. The proposed method not only improves ChainMail's linear deformation with the nonlinear characteristics of neural dynamics but also enables the cellular neural network to follow the principle of continuum mechanics to simulate soft tissue deformation.

  20. Viscoelastic-cycle model of interseismic deformation in the northwestern United States

    USGS Publications Warehouse

    Pollitz, F.F.; McCrory, Patricia; Wilson, Doug; Svarc, Jerry; Puskas, Christine; Smith, Robert B.

    2010-01-01

    We apply a viscoelastic cycle model to a compilation of GPS velocity fields in order to address the kinematics of deformation in the northwestern United States. A viscoelastic cycle model accounts for time-dependent deformation following large crustal earthquakes and is an alternative to block models for explaining the interseismic crustal velocity field. Building on the approach taken in Pollitz et al., we construct a deformation model for the entire western United States-based on combined fault slip and distributed deformation-and focus on the implications for the Mendocino triple junction (MTJ), Cascadia megathrust, and western Washington. We find significant partitioning between strike-slip and dip-slip motion near the MTJ as the tectonic environment shifts from northwest-directed shear along the San Andreas fault system to east-west convergence along the Juan de Fuca Plate. By better accounting for the budget of aseismic and seismic slip along the Cascadia subduction interface in conjunction with an assumed rheology, we revise a previous model of slip for the M~ 9 1700 Cascadia earthquake. In western Washington, we infer slip rates on a number of strike-slip and dip-slip faults that accommodate northward convergence of the Oregon Coast block and northwestward convergence of the Juan de Fuca Plate. Lateral variations in first order mechanical properties (e.g. mantle viscosity, vertically averaged rigidity) explain, to a large extent, crustal strain that cannot be rationalized with cyclic deformation on a laterally homogeneous viscoelastic structure. Our analysis also shows that present crustal deformation measurements, particularly with the addition of the Plate Boundary Observatory, can constrain such lateral variations.

  1. Rotation and strain rate of Sulawesi from geometrical velocity field

    NASA Astrophysics Data System (ADS)

    Sarsito, D. A.; Susilo, Simons, W. J. F.; Abidin, H. Z.; Sapiie, B.; Triyoso, W.; Andreas, H.

    2017-07-01

    One of methods that can be used to determine the tectonic deformation status is rate estimation from geometric rotation and strain using quantitative velocity data from GPS observations. Microplate Sulawesi region located in the zone of triple junction (Eurasia, Australia and Philippine Sea Plates) has very complex tectonic and seismic condition, which is why become very important to know its recent deformation status in order to study neo-tectonic and disaster mitigation. Deformation rate quantification is estimated in two parameters: rotation and geodetic strain rate of each GPS station Delaunay triangle in the study area. The analysis in this study is not done using the grids since there is no rheological information at location that can be used as the interpolation-extrapolation constraints. Our analysis reveals that Sulawesi is characterized by rapid rotation in several different domains and compression-strain pattern that varies depending on the type and boundary conditions of microplate. This information is useful for studying neo tectonic deformation status and earthquake disaster mitigation.

  2. Linking plate reconstructions with deforming lithosphere to geodynamic models

    NASA Astrophysics Data System (ADS)

    Müller, R. D.; Gurnis, M.; Flament, N.; Seton, M.; Spasojevic, S.; Williams, S.; Zahirovic, S.

    2011-12-01

    While global computational models are rapidly advancing in terms of their capabilities, there is an increasing need for assimilating observations into these models and/or ground-truthing model outputs. The open-source and platform independent GPlates software fills this gap. It was originally conceived as a tool to interactively visualize and manipulate classical rigid plate reconstructions and represent them as time-dependent topological networks of editable plate boundaries. The user can export time-dependent plate velocity meshes that can be used either to define initial surface boundary conditions for geodynamic models or alternatively impose plate motions throughout a geodynamic model run. However, tectonic plates are not rigid, and neglecting plate deformation, especially that of the edges of overriding plates, can result in significant misplacing of plate boundaries through time. A new, substantially re-engineered version of GPlates is now being developed that allows an embedding of deforming plates into topological plate boundary networks. We use geophysical and geological data to define the limit between rigid and deforming areas, and the deformation history of non-rigid blocks. The velocity field predicted by these reconstructions can then be used as a time-dependent surface boundary condition in regional or global 3-D geodynamic models, or alternatively as an initial boundary condition for a particular plate configuration at a given time. For time-dependent models with imposed plate motions (e.g. using CitcomS) we incorporate the continental lithosphere by embedding compositionally distinct crust and continental lithosphere within the thermal lithosphere. We define three isostatic columns of different thickness and buoyancy based on the tectonothermal age of the continents: Archean, Proterozoic and Phanerozoic. In the fourth isostatic column, the oceans, the thickness of the thermal lithosphere is assimilated using a half-space cooling model. We also

  3. Present State of the Art of Composite Fabric Forming: Geometrical and Mechanical Approaches

    PubMed Central

    Cherouat, Abel; Borouchaki, Houman

    2009-01-01

    Continuous fibre reinforced composites are now firmly established engineering materials for the manufacture of components in the automotive and aerospace industries. In this respect, composite fabrics provide flexibility in the design manufacture. The ability to define the ply shapes and material orientation has allowed engineers to optimize the composite properties of the parts. The formulation of new numerical models for the simulation of the composite forming processes must allow for reduction in the delay in manufacturing and an optimization of costs in an integrated design approach. We propose two approaches to simulate the deformation of woven fabrics: geometrical and mechanical approaches.

  4. General analysis of slab lasers using geometrical optics.

    PubMed

    Chung, Te-yuan; Bass, Michael

    2007-02-01

    A thorough and general geometrical optics analysis of a slab-shaped laser gain medium is presented. The length and thickness ratio is critical if one is to achieve the maximum utilization of absorbed pump power by the laser light in such a medium; e.g., the fill factor inside the slab is to be maximized. We point out that the conditions for a fill factor equal to 1, laser light entering and exiting parallel to the length of the slab, and Brewster angle incidence on the entrance and exit faces cannot all be satisfied at the same time. Deformed slabs are also studied. Deformation along the width direction of the largest surfaces is shown to significantly reduce the fill factor that is possible.

  5. Closed geometric models in medical applications

    NASA Astrophysics Data System (ADS)

    Jagannathan, Lakshmipathy; Nowinski, Wieslaw L.; Raphel, Jose K.; Nguyen, Bonnie T.

    1996-04-01

    Conventional surface fitting methods give twisted surfaces and complicates capping closures. This is a typical character of surfaces that lack rectangular topology. We suggest an algorithm which overcomes these limitations. The analysis of the algorithm is presented with experimental results. This algorithm assumes the mass center lying inside the object. Both capping closure and twisting are results of inadequate information on the geometric proximity of the points and surfaces which are proximal in the parametric space. Geometric proximity at the contour level is handled by mapping the points along the contour onto a hyper-spherical space. The resulting angular gradation with respect to the centroid is monotonic and hence avoids the twisting problem. Inter-contour geometric proximity is achieved by partitioning the point set based on the angle it makes with the respective centroids. Avoidance of capping complications is achieved by generating closed cross curves connecting curves which are reflections about the abscissa. The method is of immense use for the generation of the deep cerebral structures and is applied to the deep structures generated from the Schaltenbrand- Wahren brain atlas.

  6. Geometric mechanics for modelling bioinspired robots locomotion: from rigid to continuous (soft) systems

    NASA Astrophysics Data System (ADS)

    Boyer, Frederic; Porez, Mathieu; Renda, Federico

    This talk presents recent geometric tools developed to model the locomotion dynamics of bio-inspired robots. Starting from the model of discrete rigid multibody systems we will rapidly shift to the case of continuous systems inspired from snakes and fish. To that end, we will build on the model of Cosserat media. This extended picture of geometric locomotion dynamics (inspired from fields' theory) will allow us to introduce models of swimming recently used in biorobotics. We will show how modeling a fish as a one-dimensional Cosserat medium allows to recover and extend the Large Amplitude Elongated Body theory of J. Lighthill and to apply it to an eel-like robot. In the same vein, modeling the mantle of cephalopods as a two dimensional Cosserat medium will build a basis for studying the jet propelling of a soft octopus like robot.

  7. Mechanisms of strain accommodation in plastically-deformed zircon under simple shear deformation conditions during amphibolite-facies metamorphism

    NASA Astrophysics Data System (ADS)

    Kovaleva, Elizaveta; Klötzli, Urs; Wheeler, John; Habler, Gerlinde

    2018-02-01

    This study documents the strain accommodation mechanisms in zircon under amphibolite-facies metamorphic conditions in simple shear. Microstructural data from undeformed, fractured and crystal-plastically deformed zircon crystals are described in the context of the host shear zone, and evaluated in the light of zircon elastic anisotropy. Our work challenges the existing model of zircon evolution and shows previously undescribed rheological characteristics for this important accessory mineral. Crystal-plastically deformed zircon grains have axis oriented parallel to the foliation plane, with the majority of deformed grains having axis parallel to the lineation. Zircon accommodates strain by a network of stepped low-angle boundaries, formed by switching between tilt dislocations with the slip systems <100>{010} and < 1 bar 10>{110} and rotation axis [001], twist dislocations with the rotation axis [001], and tilt dislocations with the slip system <100>{001} and rotation axis [010]. The slip system < 1 bar 10>{110} is newly described for zircon. Most misorientation axes in plastically-deformed zircon grains are parallel to the XY plane of the sample and have [001] crystallographic direction. Such behaviour of strained zircon lattice is caused by elastic anisotropy that has a direct geometric control on the rheology, deformation mechanisms and dominant slip systems in zircon. Young's modulus and P wave velocity have highest values parallel to zircon [001] axis, indicating that zircon is elastically strong along this direction. Poisson ratio and Shear modulus demonstrate that zircon is also most resistant to shearing along [001]. Thus, [001] axis is the most common rotation axis in zircon. The described zircon behaviour is important to take into account during structural and geochronological investigations of (poly)metamorphic terrains. Geometry of dislocations in zircon may help reconstructing the geometry of the host shear zone(s), large-scale stresses in the

  8. Evaluation of Geometrically Nonlinear Reduced Order Models with Nonlinear Normal Modes

    DOE PAGES

    Kuether, Robert J.; Deaner, Brandon J.; Hollkamp, Joseph J.; ...

    2015-09-15

    Several reduced-order modeling strategies have been developed to create low-order models of geometrically nonlinear structures from detailed finite element models, allowing one to compute the dynamic response of the structure at a dramatically reduced cost. But, the parameters of these reduced-order models are estimated by applying a series of static loads to the finite element model, and the quality of the reduced-order model can be highly sensitive to the amplitudes of the static load cases used and to the type/number of modes used in the basis. Our paper proposes to combine reduced-order modeling and numerical continuation to estimate the nonlinearmore » normal modes of geometrically nonlinear finite element models. Not only does this make it possible to compute the nonlinear normal modes far more quickly than existing approaches, but the nonlinear normal modes are also shown to be an excellent metric by which the quality of the reduced-order model can be assessed. Hence, the second contribution of this work is to demonstrate how nonlinear normal modes can be used as a metric by which nonlinear reduced-order models can be compared. Moreover, various reduced-order models with hardening nonlinearities are compared for two different structures to demonstrate these concepts: a clamped–clamped beam model, and a more complicated finite element model of an exhaust panel cover.« less

  9. Modelling highly deformable metal extrusion using SPH

    NASA Astrophysics Data System (ADS)

    Prakash, Mahesh; Cleary, Paul W.

    2015-05-01

    Computational modelling is often used to reduce trial extrusions through accurate defect prediction. Traditionally, metal extrusion is modelled using mesh based finite element methods. However, large plastic deformations can lead to heavy re-meshing and numerical diffusion. Here we use the mesh-less smoothed particle hydrodynamics method since it allows simulation of large deformations without re-meshing and the tracking of history dependent properties such as plastic strain making it suitable for defect prediction. The variation in plastic strain and deformation for aluminium alloy in a cylindrical 3D geometry with extrusion ratio and die angle is evaluated. The extrusion process is found to have three distinct phases consisting of an initial sharp rise in extrusion force, a steady phase requiring constant force and terminating in a sharp decline in force as metal is completely extruded. Deformation and plastic strain increased significantly with extrusion ratio but only moderately with die angle. Extrusion force increased by 150 % as the extrusion ratio increased from 2:1 to 4:1 but had only a marginal change with die angle. A low strain zone in the centre of the extruded product was found to be a function of extrusion ratio but was persistent and did not vary with die angle. Simulation of a complex 3D building industry component showed large variations in plastic strain along the length of the product at two scales. These were due to change in metal behaviour as extrusion progressed from phase 1 to phase 2. A stagnation zone at the back of the die was predicted that could lead to the "funnel" or "pipe" defect.

  10. A new approach for handling longitudinal count data with zero-inflation and overdispersion: poisson geometric process model.

    PubMed

    Wan, Wai-Yin; Chan, Jennifer S K

    2009-08-01

    For time series of count data, correlated measurements, clustering as well as excessive zeros occur simultaneously in biomedical applications. Ignoring such effects might contribute to misleading treatment outcomes. A generalized mixture Poisson geometric process (GMPGP) model and a zero-altered mixture Poisson geometric process (ZMPGP) model are developed from the geometric process model, which was originally developed for modelling positive continuous data and was extended to handle count data. These models are motivated by evaluating the trend development of new tumour counts for bladder cancer patients as well as by identifying useful covariates which affect the count level. The models are implemented using Bayesian method with Markov chain Monte Carlo (MCMC) algorithms and are assessed using deviance information criterion (DIC).

  11. Global organization of tectonic deformation on Venus

    NASA Astrophysics Data System (ADS)

    Bilotti, Frank; Connors, Chris; Suppe, John

    1993-03-01

    The geographic organization of surface deformation on Venus as on Earth is a key to understanding the global tectonic system. To date we have mapped the distribution of three unambiguous tectonic land forms on Venus: (1) linear foldbelts analogous to those at plate margins of the Earth; (2) linear rift zones, analogous to continental rifts on the Earth; and (3) distributed plains deformation in the form of wrinkle ridges and extensional faults and fractures. The linear foldbelts are the dominant structural style in the Northern Hemisphere; ninety percent of the planet's foldbelts lie above the equator. In contrast, compressive deformation in the Southern Hemisphere is dominated by two large, sweeping patterns of wrinkle ridges. The two hemispheres are divided by an equatorial region that is largely covered by rift zones and several large tessera blocks. A tectonic model of generally poleward convergence of the Northern Hemisphere explains the distribution of foldbelts and rift zones. In our model, a northern hemispherical plate (or system of plates) moves poleward and deforms along discrete, predominately longitudinal bands. We recognize four types of foldbelts based on their relationships to other large-scale tectonic features on Venus. There are foldbelts that lie within the low plains, foldbelts associated with coronae, novae and chasmata, foldbelts that lie at the margins of poly-deformed tessera plateaus, and the folded mountain belts around Lakshmi Planum. We see a geometric increase in the area of fold belts when normalized to percent area at a given latitude. This increase is consistent with our model of poleward convergence. Also, the orientations of most foldbelts are either approximately north-south or parallel to lines of latitude in the northern hemisphere. This observation is also consistent with the model in that the longitudinal bands are the result of the decreasing area of the sphere as the plate moves poleward and the latitudinal belts are the

  12. Global organization of tectonic deformation on Venus

    NASA Technical Reports Server (NTRS)

    Bilotti, Frank; Connors, Chris; Suppe, John

    1993-01-01

    The geographic organization of surface deformation on Venus as on Earth is a key to understanding the global tectonic system. To date we have mapped the distribution of three unambiguous tectonic land forms on Venus: (1) linear foldbelts analogous to those at plate margins of the Earth; (2) linear rift zones, analogous to continental rifts on the Earth; and (3) distributed plains deformation in the form of wrinkle ridges and extensional faults and fractures. The linear foldbelts are the dominant structural style in the Northern Hemisphere; ninety percent of the planet's foldbelts lie above the equator. In contrast, compressive deformation in the Southern Hemisphere is dominated by two large, sweeping patterns of wrinkle ridges. The two hemispheres are divided by an equatorial region that is largely covered by rift zones and several large tessera blocks. A tectonic model of generally poleward convergence of the Northern Hemisphere explains the distribution of foldbelts and rift zones. In our model, a northern hemispherical plate (or system of plates) moves poleward and deforms along discrete, predominately longitudinal bands. We recognize four types of foldbelts based on their relationships to other large-scale tectonic features on Venus. There are foldbelts that lie within the low plains, foldbelts associated with coronae, novae and chasmata, foldbelts that lie at the margins of poly-deformed tessera plateaus, and the folded mountain belts around Lakshmi Planum. We see a geometric increase in the area of fold belts when normalized to percent area at a given latitude. This increase is consistent with our model of poleward convergence. Also, the orientations of most foldbelts are either approximately north-south or parallel to lines of latitude in the northern hemisphere. This observation is also consistent with the model in that the longitudinal bands are the result of the decreasing area of the sphere as the plate moves poleward and the latitudinal belts are the

  13. A revised dislocation model of interseismic deformation of the Cascadia subduction zone

    USGS Publications Warehouse

    Wang, Kelin; Wells, Ray E.; Mazzotti, Stephane; Hyndman, Roy D.; Sagiya, Takeshi

    2003-01-01

    CAS3D‐2, a new three‐dimensional (3‐D) dislocation model, is developed to model interseismic deformation rates at the Cascadia subduction zone. The model is considered a snapshot description of the deformation field that changes with time. The effect of northward secular motion of the central and southern Cascadia forearc sliver is subtracted to obtain the effective convergence between the subducting plate and the forearc. Horizontal deformation data, including strain rates and surface velocities from Global Positioning System (GPS) measurements, provide primary geodetic constraints, but uplift rate data from tide gauges and leveling also provide important validations for the model. A locked zone, based on the results of previous thermal models constrained by heat flow observations, is located entirely offshore beneath the continental slope. Similar to previous dislocation models, an effective zone of downdip transition from locking to full slip is used, but the slip deficit rate is assumed to decrease exponentially with downdip distance. The exponential function resolves the problem of overpredicting coastal GPS velocities and underpredicting inland velocities by previous models that used a linear downdip transition. A wide effective transition zone (ETZ) partially accounts for stress relaxation in the mantle wedge that cannot be simulated by the elastic model. The pattern of coseismic deformation is expected to be different from that of interseismic deformation at present, 300 years after the last great subduction earthquake. The downdip transition from full rupture to no slip should take place over a much narrower zone.

  14. Dynamic deformable models for 3D MRI heart segmentation

    NASA Astrophysics Data System (ADS)

    Zhukov, Leonid; Bao, Zhaosheng; Gusikov, Igor; Wood, John; Breen, David E.

    2002-05-01

    Automated or semiautomated segmentation of medical images decreases interstudy variation, observer bias, and postprocessing time as well as providing clincally-relevant quantitative data. In this paper we present a new dynamic deformable modeling approach to 3D segmentation. It utilizes recently developed dynamic remeshing techniques and curvature estimation methods to produce high-quality meshes. The approach has been implemented in an interactive environment that allows a user to specify an initial model and identify key features in the data. These features act as hard constraints that the model must not pass through as it deforms. We have employed the method to perform semi-automatic segmentation of heart structures from cine MRI data.

  15. Vesicle deformation by microtubules: A phase diagram

    NASA Astrophysics Data System (ADS)

    Emsellem, Virginie; Cardoso, Olivier; Tabeling, Patrick

    1998-10-01

    The experimental investigation of vesicles deformed by the growth of encapsulated microtubules shows that the axisymmetric morphologies can be classified into ovals, lemons, φ, cherries, dumbbells, and pearls. A geometrical phase diagram is established. Numerical minimization of the elastic energy of the membrane reproduces satisfactorily well the observed morphologies and the corresponding phase diagram.

  16. Two-dimensional numerical modeling for separation of deformable cells using dielectrophoresis.

    PubMed

    Ye, Ting; Li, Hua; Lam, K Y

    2015-02-01

    In this paper, we numerically explore the possibility of separating two groups of deformable cells, by a very small dielectrophoretic (DEP) microchip with the characteristic length of several cell diameters. A 2D two-fluid model is developed to describe the separation process, where three types of forces are considered, the aggregation force for cell-cell interaction, the deformation force for cell deformation, and the DEP force for cell dielectrophoresis. As a model validation, we calculate the levitation height of a cell subject to DEP force, and compare it with the experimental data. After that, we simulate the separation of two groups of cells with different dielectric properties at high and low frequencies, respectively. The simulation results show that the deformable cells can be separated successfully by a very small DEP microchip, according to not only their different permittivities at the high frequency, but also their different conductivities at the low frequency. In addition, both two groups of cells have a shape deformation from an original shape to a lopsided slipper shape during the separation process. It is found that the cell motion is mainly determined by the DEP force arising from the electric field, causing the cells to deviate from the centerline of microchannel. However, the cell deformation is mainly determined by the deformation force arising from the fluid flow, causing the deviated cells to undergo an asymmetric motion with the deformation of slipper shape. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Discrete Surface Evolution and Mesh Deformation for Aircraft Icing Applications

    NASA Technical Reports Server (NTRS)

    Thompson, David; Tong, Xiaoling; Arnoldus, Qiuhan; Collins, Eric; McLaurin, David; Luke, Edward; Bidwell, Colin S.

    2013-01-01

    Robust, automated mesh generation for problems with deforming geometries, such as ice accreting on aerodynamic surfaces, remains a challenging problem. Here we describe a technique to deform a discrete surface as it evolves due to the accretion of ice. The surface evolution algorithm is based on a smoothed, face-offsetting approach. We also describe a fast algebraic technique to propagate the computed surface deformations into the surrounding volume mesh while maintaining geometric mesh quality. Preliminary results presented here demonstrate the ecacy of the approach for a sphere with a prescribed accretion rate, a rime ice accretion, and a more complex glaze ice accretion.

  18. Analogue modelling for localization of deformation in the extensional pull-apart basins: comparison with the west part of NAF, Turkey

    NASA Astrophysics Data System (ADS)

    Bulkan, Sibel; Storti, Fabrizio; Cavozzi, Cristian; Vannucchi, Paola

    2017-04-01

    Analogue modelling remains one of the best methods for investigating progressive deformation of pull apart systems in strike slip faults that are poorly known. Analogue model experiments for the North Anatolian Fault (NAF) system around the Sea of Marmara are extremely rare in the geological literature. Our purpose in this work is to monitor the relation between the horizontal propagation and branching of the strike slip fault, and the structural and topographic expression resulting from this process. These experiments may provide insights into the geometric evolution and kinematic of west part of the NAF system. For this purpose, we run several 3D sand box experiments, appropriately scaled. Plexiglass sheets were purposely cut to simulate the geometry of the NAF. Silicone was placed on the top of these to simulate the viscous lower crust, while the brittle upper crust was simulated with pure dry sand. Dextral relative fault motion was imposed as well using different velocities to reproduce different strain rates and pull apart formation at the releasing bend. Our experiments demonstrate the variation of the shear zone shapes and how the master-fault propagates during the deformation, helping to cover the gaps between geodetic and geologic slip information. Lower crustal flow may explain how the deformation is transferred to the upper crust, and stress partitioned among the strike slip faults and pull-apart basin systems. Stress field evolution seems to play an interesting role to help strain localization. We compare the results of these experiments with natural examples around the western part of NAF and with seismic observations.

  19. Investigation on Insar Time Series Deformation Model Considering Rheological Parameters for Soft Clay Subgrade Monitoring

    NASA Astrophysics Data System (ADS)

    Xing, X.; Yuan, Z.; Chen, L. F.; Yu, X. Y.; Xiao, L.

    2018-04-01

    The stability control is one of the major technical difficulties in the field of highway subgrade construction engineering. Building deformation model is a crucial step for InSAR time series deformation monitoring. Most of the InSAR deformation models for deformation monitoring are pure empirical mathematical models, without considering the physical mechanism of the monitored object. In this study, we take rheology into consideration, inducing rheological parameters into traditional InSAR deformation models. To assess the feasibility and accuracy for our new model, both simulation and real deformation data over Lungui highway (a typical highway built on soft clay subgrade in Guangdong province, China) are investigated with TerraSAR-X satellite imagery. In order to solve the unknows of the non-linear rheological model, three algorithms: Gauss-Newton (GN), Levenberg-Marquarat (LM), and Genetic Algorithm (GA), are utilized and compared to estimate the unknown parameters. Considering both the calculation efficiency and accuracy, GA is chosen as the final choice for the new model in our case study. Preliminary real data experiment is conducted with use of 17 TerraSAR-X Stripmap images (with a 3-m resolution). With the new deformation model and GA aforementioned, the unknown rheological parameters over all the high coherence points are obtained and the LOS deformation (the low-pass component) sequences are generated.

  20. Geometries in Soft Matter From Geometric Frustration, Liquid Droplets to Electrostatics in Solution

    NASA Astrophysics Data System (ADS)

    Yao, Zhenwei

    This thesis explores geometric aspects of soft matter systems. The topics covered fall into three categories: (i) geometric frustrations, including the interplay of geometry and topological defects in two dimensional systems, and the frustration of a planar sheet attached to a curved surface; (ii) geometries of liquid droplets, including the curvature driven instabilities of toroidal liquid droplets and the self-propulsion of droplets on a spatially varying surface topography; (iii) the study of the electric double layer structure around charged spherical interfaces by a geometric method. In (i), we study the crystalline order on capillary bridges with varying Gaussian curvature. Energy requires the appearance of topological defects on the surface, which are natural spots for biological activity and chemical functionalization. We further study how liquid crystalline order deforms flexible structured vesicles. In particular we find faceted tetrahedral vesicle as the ground state, which may lead to the design of supra-molecular structures with tetrahedral symmetry and new classes of nano-carriers. Furthermore, by a simple paper model we explore the geometric frustration on a planar sheet when brought to a negative curvature surface in a designed elasto-capillary system. In (ii), motivated by the idea of realizing crystalline order on a stable toroidal droplet and a beautiful experiment on toroidal droplets, we study the Rayleigh instability and the shrinking instability of thin and fat toroidal droplets, where the toroidal geometry plays an essential role. In (iii), by a geometric mapping we construct an approximate analytic spherical solution to the nonlinear Poisson-Boltzmann equation, and identify the applicability regime of the solution. The derived geometric solution enables further analytical study of spherical electrostatic systems such as colloidal suspensions.

  1. Geometric Structure of 3D Spinal Curves: Plane Regions and Connecting Zones

    PubMed Central

    Berthonnaud, E.; Hilmi, R.; Dimnet, J.

    2012-01-01

    This paper presents a new study of the geometric structure of 3D spinal curves. The spine is considered as an heterogeneous beam, compound of vertebrae and intervertebral discs. The spine is modeled as a deformable wire along which vertebrae are beads rotating about the wire. 3D spinal curves are compound of plane regions connected together by zones of transition. The 3D spinal curve is uniquely flexed along the plane regions. The angular offsets between adjacent regions are concentrated at level of the middle zones of transition, so illustrating the heterogeneity of the spinal geometric structure. The plane regions along the 3D spinal curve must satisfy two criteria: (i) a criterion of minimum distance between the curve and the regional plane and (ii) a criterion controlling that the curve is continuously plane at the level of the region. The geometric structure of each 3D spinal curve is characterized by the sizes and orientations of regional planes, by the parameters representing flexed regions and by the sizes and functions of zones of transition. Spinal curves of asymptomatic subjects show three plane regions corresponding to spinal curvatures: lumbar, thoracic and cervical curvatures. In some scoliotic spines, four plane regions may be detected. PMID:25031873

  2. Visualizing along-strike change in deformation style using analog modeling and digital visualization software

    NASA Astrophysics Data System (ADS)

    Burberry, C. M.

    2012-12-01

    It is a well-known phenomenon that deformation style varies in space; both along the strike of a deformed belt and along the strike of individual structures within that belt. This variation in deformation style is traditionally visualized with a series of closely spaced 2D cross-sections. However, the use of 2D section lines implies plane strain along those lines, and the true 3D nature of the deformation is not necessarily captured. By using a combination of remotely sensed data, analog modeling of field datasets and this remote data, and numerical and digital visualization of the finished model, a 3D understanding and restoration of the deformation style within the region can be achieved. The workflow used for this study begins by considering the variation in deformation style which can be observed from satellite images and combining this data with traditional field data, in order to understand the deformation in the region under consideration. The conceptual model developed at this stage is then modeled using a sand and silicone modeling system, where the kinematics and dynamics of the deformation processes can be examined. A series of closely-spaced cross-sections, as well as 3D images of the deformation, are created from the analog model, and input into a digital visualization and modeling system for restoration. In this fashion, a valid 3D model is created where the internal structure of the deformed system can be visualized and mined for information. The region used in the study is the Sawtooth Range, Montana. The region forms part of the Montana Disturbed Belt in the Front Ranges of the Rocky Mountains, along strike from the Alberta Syncline in the Canadian Rocky Mountains. Interpretation of satellite data indicates that the deformation front structures include both folds and thrust structures. The thrust structures vary from hinterland-verging triangle zones to foreland-verging imbricate thrusts along strike, and the folds also vary in geometry along

  3. Deformation of the quintom cosmological model and its consequences

    NASA Astrophysics Data System (ADS)

    Sadeghi, J.; Pourhassan, B.; Nekouee, Z.; Shokri, M.

    In this paper, we investigate the effects of noncommutative phase-space on the quintom cosmological model. In that case, we discuss about some cosmological parameters and show that they depend on the deformation parameters. We find that the noncommutative parameter plays important role which helps to re-arrange the divergency of cosmological constant. We draw time-dependent scale factor and investigate the effect of noncommutative parameters. Finally, we take advantage from noncommutative phase-space and obtain the deformed Lagrangian for the quintom model. In order to discuss some cosmological phenomena as dark energy and inflation, we employ Noether symmetry.

  4. Segmentation of pelvic structures for planning CT using a geometrical shape model tuned by a multi-scale edge detector

    PubMed Central

    Martínez, Fabio; Romero, Eduardo; Dréan, Gaël; Simon, Antoine; Haigron, Pascal; De Crevoisier, Renaud; Acosta, Oscar

    2014-01-01

    Accurate segmentation of the prostate and organs at risk in computed tomography (CT) images is a crucial step for radiotherapy (RT) planning. Manual segmentation, as performed nowadays, is a time consuming process and prone to errors due to the a high intra- and inter-expert variability. This paper introduces a new automatic method for prostate, rectum and bladder segmentation in planning CT using a geometrical shape model under a Bayesian framework. A set of prior organ shapes are first built by applying Principal Component Analysis (PCA) to a population of manually delineated CT images. Then, for a given individual, the most similar shape is obtained by mapping a set of multi-scale edge observations to the space of organs with a customized likelihood function. Finally, the selected shape is locally deformed to adjust the edges of each organ. Experiments were performed with real data from a population of 116 patients treated for prostate cancer. The data set was split in training and test groups, with 30 and 86 patients, respectively. Results show that the method produces competitive segmentations w.r.t standard methods (Averaged Dice = 0.91 for prostate, 0.94 for bladder, 0.89 for Rectum) and outperforms the majority-vote multi-atlas approaches (using rigid registration, free-form deformation (FFD) and the demons algorithm) PMID:24594798

  5. Physiome-model-based state-space framework for cardiac deformation recovery.

    PubMed

    Wong, Ken C L; Zhang, Heye; Liu, Huafeng; Shi, Pengcheng

    2007-11-01

    To more reliably recover cardiac information from noise-corrupted, patient-specific measurements, it is essential to employ meaningful constraining models and adopt appropriate optimization criteria to couple the models with the measurements. Although biomechanical models have been extensively used for myocardial motion recovery with encouraging results, the passive nature of such constraints limits their ability to fully count for the deformation caused by active forces of the myocytes. To overcome such limitations, we propose to adopt a cardiac physiome model as the prior constraint for cardiac motion analysis. The cardiac physiome model comprises an electric wave propagation model, an electromechanical coupling model, and a biomechanical model, which are connected through a cardiac system dynamics for a more complete description of the macroscopic cardiac physiology. Embedded within a multiframe state-space framework, the uncertainties of the model and the patient's measurements are systematically dealt with to arrive at optimal cardiac kinematic estimates and possibly beyond. Experiments have been conducted to compare our proposed cardiac-physiome-model-based framework with the solely biomechanical model-based framework. The results show that our proposed framework recovers more accurate cardiac deformation from synthetic data and obtains more sensible estimates from real magnetic resonance image sequences. With the active components introduced by the cardiac physiome model, cardiac deformations recovered from patient's medical images are more physiologically plausible.

  6. Multiscale framework for predicting the coupling between deformation and fluid diffusion in porous rocks

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Andrade, José E; Rudnicki, John W

    2012-12-14

    In this project, a predictive multiscale framework will be developed to simulate the strong coupling between solid deformations and fluid diffusion in porous rocks. We intend to improve macroscale modeling by incorporating fundamental physical modeling at the microscale in a computationally efficient way. This is an essential step toward further developments in multiphysics modeling, linking hydraulic, thermal, chemical, and geomechanical processes. This research will focus on areas where severe deformations are observed, such as deformation bands, where classical phenomenology breaks down. Multiscale geometric complexities and key geomechanical and hydraulic attributes of deformation bands (e.g., grain sliding and crushing, and poremore » collapse, causing interstitial fluid expulsion under saturated conditions), can significantly affect the constitutive response of the skeleton and the intrinsic permeability. Discrete mechanics (DEM) and the lattice Boltzmann method (LBM) will be used to probe the microstructure---under the current state---to extract the evolution of macroscopic constitutive parameters and the permeability tensor. These evolving macroscopic constitutive parameters are then directly used in continuum scale predictions using the finite element method (FEM) accounting for the coupled solid deformation and fluid diffusion. A particularly valuable aspect of this research is the thorough quantitative verification and validation program at different scales. The multiscale homogenization framework will be validated using X-ray computed tomography and 3D digital image correlation in situ at the Advanced Photon Source in Argonne National Laboratories. Also, the hierarchical computations at the specimen level will be validated using the aforementioned techniques in samples of sandstone undergoing deformation bands.« less

  7. High Strain Rate Deformation Modeling of a Polymer Matrix Composite. Part 1; Matrix Constitutive Equations

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.; Stouffer, Donald C.

    1998-01-01

    Recently applications have exposed polymer matrix composite materials to very high strain rate loading conditions, requiring an ability to understand and predict the material behavior under these extreme conditions. In this first paper of a two part report, background information is presented, along with the constitutive equations which will be used to model the rate dependent nonlinear deformation response of the polymer matrix. Strain rate dependent inelastic constitutive models which were originally developed to model the viscoplastic deformation of metals have been adapted to model the nonlinear viscoelastic deformation of polymers. The modified equations were correlated by analyzing the tensile/ compressive response of both 977-2 toughened epoxy matrix and PEEK thermoplastic matrix over a variety of strain rates. For the cases examined, the modified constitutive equations appear to do an adequate job of modeling the polymer deformation response. A second follow-up paper will describe the implementation of the polymer deformation model into a composite micromechanical model, to allow for the modeling of the nonlinear, rate dependent deformation response of polymer matrix composites.

  8. Use of multiscale zirconium alloy deformation models in nuclear fuel behavior analysis

    NASA Astrophysics Data System (ADS)

    Montgomery, Robert; Tomé, Carlos; Liu, Wenfeng; Alankar, Alankar; Subramanian, Gopinath; Stanek, Christopher

    2017-01-01

    Accurate prediction of cladding mechanical behavior is a key aspect of modeling nuclear fuel behavior, especially for conditions of pellet-cladding interaction (PCI), reactivity-initiated accidents (RIA), and loss of coolant accidents (LOCA). Current approaches to fuel performance modeling rely on empirical constitutive models for cladding creep, growth and plastic deformation, which are limited to the materials and conditions for which the models were developed. To improve upon this approach, a microstructurally-based zirconium alloy mechanical deformation analysis capability is being developed within the United States Department of Energy Consortium for Advanced Simulation of Light Water Reactors (CASL). Specifically, the viscoplastic self-consistent (VPSC) polycrystal plasticity modeling approach, developed by Lebensohn and Tomé [1], has been coupled with the BISON engineering scale fuel performance code to represent the mechanistic material processes controlling the deformation behavior of light water reactor (LWR) cladding. A critical component of VPSC is the representation of the crystallographic nature (defect and dislocation movement) and orientation of the grains within the matrix material and the ability to account for the role of texture on deformation. A future goal is for VPSC to obtain information on reaction rate kinetics from atomistic calculations to inform the defect and dislocation behavior models described in VPSC. The multiscale modeling of cladding deformation mechanisms allowed by VPSC far exceed the functionality of typical semi-empirical constitutive models employed in nuclear fuel behavior codes to model irradiation growth and creep, thermal creep, or plasticity. This paper describes the implementation of an interface between VPSC and BISON and provides initial results utilizing the coupled functionality.

  9. Modeling of Geometric Error in Linear Guide Way to Improved the vertical three-axis CNC Milling machine’s accuracy

    NASA Astrophysics Data System (ADS)

    Kwintarini, Widiyanti; Wibowo, Agung; Arthaya, Bagus M.; Yuwana Martawirya, Yatna

    2018-03-01

    The purpose of this study was to improve the accuracy of three-axis CNC Milling Vertical engines with a general approach by using mathematical modeling methods of machine tool geometric errors. The inaccuracy of CNC machines can be caused by geometric errors that are an important factor during the manufacturing process and during the assembly phase, and are factors for being able to build machines with high-accuracy. To improve the accuracy of the three-axis vertical milling machine, by knowing geometric errors and identifying the error position parameters in the machine tool by arranging the mathematical modeling. The geometric error in the machine tool consists of twenty-one error parameters consisting of nine linear error parameters, nine angle error parameters and three perpendicular error parameters. The mathematical modeling approach of geometric error with the calculated alignment error and angle error in the supporting components of the machine motion is linear guide way and linear motion. The purpose of using this mathematical modeling approach is the identification of geometric errors that can be helpful as reference during the design, assembly and maintenance stages to improve the accuracy of CNC machines. Mathematically modeling geometric errors in CNC machine tools can illustrate the relationship between alignment error, position and angle on a linear guide way of three-axis vertical milling machines.

  10. An efficient and scalable deformable model for virtual reality-based medical applications.

    PubMed

    Choi, Kup-Sze; Sun, Hanqiu; Heng, Pheng-Ann

    2004-09-01

    Modeling of tissue deformation is of great importance to virtual reality (VR)-based medical simulations. Considerable effort has been dedicated to the development of interactively deformable virtual tissues. In this paper, an efficient and scalable deformable model is presented for virtual-reality-based medical applications. It considers deformation as a localized force transmittal process which is governed by algorithms based on breadth-first search (BFS). The computational speed is scalable to facilitate real-time interaction by adjusting the penetration depth. Simulated annealing (SA) algorithms are developed to optimize the model parameters by using the reference data generated with the linear static finite element method (FEM). The mechanical behavior and timing performance of the model have been evaluated. The model has been applied to simulate the typical behavior of living tissues and anisotropic materials. Integration with a haptic device has also been achieved on a generic personal computer (PC) platform. The proposed technique provides a feasible solution for VR-based medical simulations and has the potential for multi-user collaborative work in virtual environment.

  11. Geometric Modeling of Inclusions as Ellipsoids

    NASA Technical Reports Server (NTRS)

    Bonacuse, Peter J.

    2008-01-01

    Nonmetallic inclusions in gas turbine disk alloys can have a significant detrimental impact on fatigue life. Because large inclusions that lead to anomalously low lives occur infrequently, probabilistic approaches can be utilized to avoid the excessively conservative assumption of lifing to a large inclusion in a high stress location. A prerequisite to modeling the impact of inclusions on the fatigue life distribution is a characterization of the inclusion occurrence rate and size distribution. To help facilitate this process, a geometric simulation of the inclusions was devised. To make the simulation problem tractable, the irregularly sized and shaped inclusions were modeled as arbitrarily oriented, three independent dimensioned, ellipsoids. Random orientation of the ellipsoid is accomplished through a series of three orthogonal rotations of axes. In this report, a set of mathematical models for the following parameters are described: the intercepted area of a randomly sectioned ellipsoid, the dimensions and orientation of the intercepted ellipse, the area of a randomly oriented sectioned ellipse, the depth and width of a randomly oriented sectioned ellipse, and the projected area of a randomly oriented ellipsoid. These parameters are necessary to determine an inclusion s potential to develop a propagating fatigue crack. Without these mathematical models, computationally expensive search algorithms would be required to compute these parameters.

  12. Polychromatic microdiffraction characterization of defect gradients in severely deformed materials.

    PubMed

    Barabash, Rozaliya I; Ice, Gene E; Liu, Wenjun; Barabash, Oleg M

    2009-01-01

    This paper analyzes local lattice rotations introduced in severely deformed polycrystalline titanium by friction stir welding. Nondestructive three-dimensional (3D) spatially resolved polychromatic X-ray microdiffraction, is used to resolve the local crystal structure of the restructured surface from neighboring local structures in the sample material. The measurements reveal strong gradients of strain and geometrically necessary dislocations near the surface and illustrate the potential of polychromatic microdiffraction for the study of deformation in complex materials systems.

  13. Model Deformation Measurements at NASA Langley Research Center

    NASA Technical Reports Server (NTRS)

    Burner, A. W.

    1998-01-01

    Only recently have large amounts of model deformation data been acquired in NASA wind tunnels. This acquisition of model deformation data was made possible by the development of an automated video photogrammetric system to measure the changes in wing twist and bending under aerodynamic load. The measurement technique is based upon a single view photogrammetric determination of two dimensional coordinates of wing targets with a fixed third dimensional coordinate, namely the spanwise location. A major consideration in the development of the measurement system was that use of the technique must not appreciably reduce wind tunnel productivity. The measurement technique has been used successfully for a number of tests at four large production wind tunnels at NASA and a dedicated system is nearing completion for a fifth facility. These facilities are the National Transonic Facility, the Transonic Dynamics Tunnel, and the Unitary Plan Wind Tunnel at NASA Langley, and the 12-FT Pressure Tunnel at NASA Ames. A dedicated system for the Langley 16-Foot Transonic Tunnel is scheduled to be used for the first time for a test in September. The advantages, limitations, and strategy of the technique as currently used in NASA wind tunnels are presented. Model deformation data are presented which illustrate the value of these measurements. Plans for further enhancements to the technique are presented.

  14. Material Properties from Air Puff Corneal Deformation by Numerical Simulations on Model Corneas

    PubMed Central

    Dorronsoro, Carlos; de la Hoz, Andrés; Marcos, Susana

    2016-01-01

    Objective To validate a new method for reconstructing corneal biomechanical properties from air puff corneal deformation images using hydrogel polymer model corneas and porcine corneas. Methods Air puff deformation imaging was performed on model eyes with artificial corneas made out of three different hydrogel materials with three different thicknesses and on porcine eyes, at constant intraocular pressure of 15 mmHg. The cornea air puff deformation was modeled using finite elements, and hyperelastic material parameters were determined through inverse modeling, minimizing the difference between the simulated and the measured central deformation amplitude and central-peripheral deformation ratio parameters. Uniaxial tensile tests were performed on the model cornea materials as well as on corneal strips, and the results were compared to stress-strain simulations assuming the reconstructed material parameters. Results The measured and simulated spatial and temporal profiles of the air puff deformation tests were in good agreement (< 7% average discrepancy). The simulated stress-strain curves of the studied hydrogel corneal materials fitted well the experimental stress-strain curves from uniaxial extensiometry, particularly in the 0–0.4 range. Equivalent Young´s moduli of the reconstructed material properties from air-puff were 0.31, 0.58 and 0.48 MPa for the three polymer materials respectively which differed < 1% from those obtained from extensiometry. The simulations of the same material but different thickness resulted in similar reconstructed material properties. The air-puff reconstructed average equivalent Young´s modulus of the porcine corneas was 1.3 MPa, within 18% of that obtained from extensiometry. Conclusions Air puff corneal deformation imaging with inverse finite element modeling can retrieve material properties of model hydrogel polymer corneas and real corneas, which are in good correspondence with those obtained from uniaxial extensiometry

  15. Material Properties from Air Puff Corneal Deformation by Numerical Simulations on Model Corneas.

    PubMed

    Bekesi, Nandor; Dorronsoro, Carlos; de la Hoz, Andrés; Marcos, Susana

    2016-01-01

    To validate a new method for reconstructing corneal biomechanical properties from air puff corneal deformation images using hydrogel polymer model corneas and porcine corneas. Air puff deformation imaging was performed on model eyes with artificial corneas made out of three different hydrogel materials with three different thicknesses and on porcine eyes, at constant intraocular pressure of 15 mmHg. The cornea air puff deformation was modeled using finite elements, and hyperelastic material parameters were determined through inverse modeling, minimizing the difference between the simulated and the measured central deformation amplitude and central-peripheral deformation ratio parameters. Uniaxial tensile tests were performed on the model cornea materials as well as on corneal strips, and the results were compared to stress-strain simulations assuming the reconstructed material parameters. The measured and simulated spatial and temporal profiles of the air puff deformation tests were in good agreement (< 7% average discrepancy). The simulated stress-strain curves of the studied hydrogel corneal materials fitted well the experimental stress-strain curves from uniaxial extensiometry, particularly in the 0-0.4 range. Equivalent Young´s moduli of the reconstructed material properties from air-puff were 0.31, 0.58 and 0.48 MPa for the three polymer materials respectively which differed < 1% from those obtained from extensiometry. The simulations of the same material but different thickness resulted in similar reconstructed material properties. The air-puff reconstructed average equivalent Young´s modulus of the porcine corneas was 1.3 MPa, within 18% of that obtained from extensiometry. Air puff corneal deformation imaging with inverse finite element modeling can retrieve material properties of model hydrogel polymer corneas and real corneas, which are in good correspondence with those obtained from uniaxial extensiometry, suggesting that this is a promising technique

  16. Left Ventricular Endocardium Tracking by Fusion of Biomechanical and Deformable Models

    PubMed Central

    Gu, Jason

    2014-01-01

    This paper presents a framework for tracking left ventricular (LV) endocardium through 2D echocardiography image sequence. The framework is based on fusion of biomechanical (BM) model of the heart with the parametric deformable model. The BM model constitutive equation consists of passive and active strain energy functions. The deformations of the LV are obtained by solving the constitutive equations using ABAQUS FEM in each frame in the cardiac cycle. The strain energy functions are defined in two user subroutines for active and passive phases. Average fusion technique is used to fuse the BM and deformable model contours. Experimental results are conducted to verify the detected contours and the results are evaluated by comparing themto a created gold standard. The results and the evaluation proved that the framework has the tremendous potential to track and segment the LV through the whole cardiac cycle. PMID:24587814

  17. Biomechanical Model for Computing Deformations for Whole-Body Image Registration: A Meshless Approach

    PubMed Central

    Li, Mao; Miller, Karol; Joldes, Grand Roman; Kikinis, Ron; Wittek, Adam

    2016-01-01

    Patient-specific biomechanical models have been advocated as a tool for predicting deformations of soft body organs/tissue for medical image registration (aligning two sets of images) when differences between the images are large. However, complex and irregular geometry of the body organs makes generation of patient-specific biomechanical models very time consuming. Meshless discretisation has been proposed to solve this challenge. However, applications so far have been limited to 2-D models and computing single organ deformations. In this study, 3-D comprehensive patient-specific non-linear biomechanical models implemented using Meshless Total Lagrangian Explicit Dynamics (MTLED) algorithms are applied to predict a 3-D deformation field for whole-body image registration. Unlike a conventional approach which requires dividing (segmenting) the image into non-overlapping constituents representing different organs/tissues, the mechanical properties are assigned using the Fuzzy C-Means (FCM) algorithm without the image segmentation. Verification indicates that the deformations predicted using the proposed meshless approach are for practical purposes the same as those obtained using the previously validated finite element models. To quantitatively evaluate the accuracy of the predicted deformations, we determined the spatial misalignment between the registered (i.e. source images warped using the predicted deformations) and target images by computing the edge-based Hausdorff distance. The Hausdorff distance-based evaluation determines that our meshless models led to successful registration of the vast majority of the image features. PMID:26791945

  18. Biomechanical model for computing deformations for whole-body image registration: A meshless approach.

    PubMed

    Li, Mao; Miller, Karol; Joldes, Grand Roman; Kikinis, Ron; Wittek, Adam

    2016-12-01

    Patient-specific biomechanical models have been advocated as a tool for predicting deformations of soft body organs/tissue for medical image registration (aligning two sets of images) when differences between the images are large. However, complex and irregular geometry of the body organs makes generation of patient-specific biomechanical models very time-consuming. Meshless discretisation has been proposed to solve this challenge. However, applications so far have been limited to 2D models and computing single organ deformations. In this study, 3D comprehensive patient-specific nonlinear biomechanical models implemented using meshless Total Lagrangian explicit dynamics algorithms are applied to predict a 3D deformation field for whole-body image registration. Unlike a conventional approach that requires dividing (segmenting) the image into non-overlapping constituents representing different organs/tissues, the mechanical properties are assigned using the fuzzy c-means algorithm without the image segmentation. Verification indicates that the deformations predicted using the proposed meshless approach are for practical purposes the same as those obtained using the previously validated finite element models. To quantitatively evaluate the accuracy of the predicted deformations, we determined the spatial misalignment between the registered (i.e. source images warped using the predicted deformations) and target images by computing the edge-based Hausdorff distance. The Hausdorff distance-based evaluation determines that our meshless models led to successful registration of the vast majority of the image features. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

  19. Simplified and refined finite element approaches for determining stresses and internal forces in geometrically nonlinear structural analysis

    NASA Technical Reports Server (NTRS)

    Robinson, J. C.

    1979-01-01

    Two methods for determining stresses and internal forces in geometrically nonlinear structural analysis are presented. The simplified approach uses the mid-deformed structural position to evaluate strains when rigid body rotation is present. The important feature of this approach is that it can easily be used with a general-purpose finite-element computer program. The refined approach uses element intrinsic or corotational coordinates and a geometric transformation to determine element strains from joint displacements. Results are presented which demonstrate the capabilities of these potentially useful approaches for geometrically nonlinear structural analysis.

  20. Electronic and geometric properties of ETS-10: QM/MM studies of cluster models.

    PubMed

    Zimmerman, Anne Marie; Doren, Douglas J; Lobo, Raul F

    2006-05-11

    Hybrid DFT/MM methods have been used to investigate the electronic and geometric properties of the microporous titanosilicate ETS-10. A comparison of finite length and periodic models demonstrates that band gap energies for ETS-10 can be well represented with relatively small cluster models. Optimization of finite clusters leads to different local geometries for bulk and end sites, where the local bulk TiO6 geometry is in good agreement with recent experimental results. Geometry optimizations reveal that any asymmetry within the axial O-Ti-O chain is negligible. The band gap in the optimized model corresponds to a O(2p) --> Tibulk(3d) transition. The results suggest that the three Ti atom, single chain, symmetric, finite cluster is an effective model for the geometric and electronic properties of bulk and end TiO6 groups in ETS-10.

  1. Deformation of Surface Nanobubbles Induced by Substrate Hydrophobicity.

    PubMed

    Wei, Jiachen; Zhang, Xianren; Song, Fan

    2016-12-13

    Recent experimental measurements have shown that there exists a population of nanobubbles with different curvature radii, whereas both computer simulations and theoretical analysis indicated that the curvature radii of different nanobubbles should be the same at a given supersaturation. To resolve such inconsistency, we perform molecular dynamics simulations on surface nanobubbles that are stabilized by heterogeneous substrates either in the geometrical heterogeneity model (GHM) or in the chemical heterogeneity model (CHM) and propose that the inconsistency could be ascribed to the substrate-induced nanobubble deformation. We find that, as expected from theory and computer simulation, for either the GHM or the CHM, there exists a universal upper limit of contact angle for the nanobubbles, which is determined by the degree of supersaturation alone. By analyzing the evolution of the shape of nanobubbles as a function of substrate hydrophobicity that is controlled here by the liquid-solid interaction, two different origins of nanobubble deformation are identified. For substrates in the GHM, where the contact line is pinned by surface roughness, variation in the liquid-solid interaction changes only the location of the contact line and the measured contact angle, without causing a change in the nanobubble curvature. For substrates in the CHM, however, the liquid-solid interaction exerted by the bottom substrate can deform the vapor-liquid interface, resulting in variations in both the curvature of the vapor-liquid interface and the contact angle.

  2. 3D tomographic reconstruction using geometrical models

    NASA Astrophysics Data System (ADS)

    Battle, Xavier L.; Cunningham, Gregory S.; Hanson, Kenneth M.

    1997-04-01

    We address the issue of reconstructing an object of constant interior density in the context of 3D tomography where there is prior knowledge about the unknown shape. We explore the direct estimation of the parameters of a chosen geometrical model from a set of radiographic measurements, rather than performing operations (segmentation for example) on a reconstructed volume. The inverse problem is posed in the Bayesian framework. A triangulated surface describes the unknown shape and the reconstruction is computed with a maximum a posteriori (MAP) estimate. The adjoint differentiation technique computes the derivatives needed for the optimization of the model parameters. We demonstrate the usefulness of the approach and emphasize the techniques of designing forward and adjoint codes. We use the system response of the University of Arizona Fast SPECT imager to illustrate this method by reconstructing the shape of a heart phantom.

  3. Dynamic deformation inspection of a human arm by using a line-scan imaging system

    NASA Astrophysics Data System (ADS)

    Hu, Eryi

    2009-11-01

    A line-scan imaging system is used in the dynamic deformation measurement of a human arm when the muscle is contracting and relaxing. The measurement principle is based on the projection grating profilometry, and the measuring system is consisted of a line-scan CCD camera, a projector, optical lens and a personal computer. The detected human arm is put upon a reference plane, and a sinusoidal grating is projected onto the object surface and reference plane at an incidence angle, respectively. The deformed fringe pattern in the same line of the dynamic detected arm is captured by the line-scan CCD camera with free trigger model, and the deformed fringe pattern is recorded in the personal computer for processing. A fast Fourier transform combining with a filtering and spectrum shifting method is used to extract the phase information caused by the profile of the detected object. Thus, the object surface profile can be obtained following the geometric relationship between the fringe deformation and the object surface height. Furthermore, the deformation procedure can be obtained line by line. Some experimental results are presented to prove the feasibility of the inspection system.

  4. Use of multiscale zirconium alloy deformation models in nuclear fuel behavior analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Montgomery, Robert, E-mail: robert.montgomery@pnnl.gov; Tomé, Carlos, E-mail: tome@lanl.gov; Liu, Wenfeng, E-mail: wenfeng.liu@anatech.com

    Accurate prediction of cladding mechanical behavior is a key aspect of modeling nuclear fuel behavior, especially for conditions of pellet-cladding interaction (PCI), reactivity-initiated accidents (RIA), and loss of coolant accidents (LOCA). Current approaches to fuel performance modeling rely on empirical constitutive models for cladding creep, growth and plastic deformation, which are limited to the materials and conditions for which the models were developed. To improve upon this approach, a microstructurally-based zirconium alloy mechanical deformation analysis capability is being developed within the United States Department of Energy Consortium for Advanced Simulation of Light Water Reactors (CASL). Specifically, the viscoplastic self-consistent (VPSC)more » polycrystal plasticity modeling approach, developed by Lebensohn and Tomé [1], has been coupled with the BISON engineering scale fuel performance code to represent the mechanistic material processes controlling the deformation behavior of light water reactor (LWR) cladding. A critical component of VPSC is the representation of the crystallographic nature (defect and dislocation movement) and orientation of the grains within the matrix material and the ability to account for the role of texture on deformation. A future goal is for VPSC to obtain information on reaction rate kinetics from atomistic calculations to inform the defect and dislocation behavior models described in VPSC. The multiscale modeling of cladding deformation mechanisms allowed by VPSC far exceed the functionality of typical semi-empirical constitutive models employed in nuclear fuel behavior codes to model irradiation growth and creep, thermal creep, or plasticity. This paper describes the implementation of an interface between VPSC and BISON and provides initial results utilizing the coupled functionality.« less

  5. Target Recognition Using Neural Networks for Model Deformation Measurements

    NASA Technical Reports Server (NTRS)

    Ross, Richard W.; Hibler, David L.

    1999-01-01

    Optical measurements provide a non-invasive method for measuring deformation of wind tunnel models. Model deformation systems use targets mounted or painted on the surface of the model to identify known positions, and photogrammetric methods are used to calculate 3-D positions of the targets on the model from digital 2-D images. Under ideal conditions, the reflective targets are placed against a dark background and provide high-contrast images, aiding in target recognition. However, glints of light reflecting from the model surface, or reduced contrast caused by light source or model smoothness constraints, can compromise accurate target determination using current algorithmic methods. This paper describes a technique using a neural network and image processing technologies which increases the reliability of target recognition systems. Unlike algorithmic methods, the neural network can be trained to identify the characteristic patterns that distinguish targets from other objects of similar size and appearance and can adapt to changes in lighting and environmental conditions.

  6. Modeling and simulation of deformation of hydrogels responding to electric stimulus.

    PubMed

    Li, Hua; Luo, Rongmo; Lam, K Y

    2007-01-01

    A model for simulation of pH-sensitive hydrogels is refined in this paper to extend its application to electric-sensitive hydrogels, termed the refined multi-effect-coupling electric-stimulus (rMECe) model. By reformulation of the fixed-charge density and consideration of finite deformation, the rMECe model is able to predict the responsive deformations of the hydrogels when they are immersed in a bath solution subject to externally applied electric field. The rMECe model consists of nonlinear partial differential governing equations with chemo-electro-mechanical coupling effects and the fixed-charge density with electric-field effect. By comparison between simulation and experiment extracted from literature, the model is verified to be accurate and stable. The rMECe model performs quantitatively for deformation analysis of the electric-sensitive hydrogels. The influences of several physical parameters, including the externally applied electric voltage, initial fixed-charge density, hydrogel strip thickness, ionic strength and valence of surrounding solution, are discussed in detail on the displacement and average curvature of the hydrogels.

  7. Deformation quantizations with separation of variables on a Kähler manifold

    NASA Astrophysics Data System (ADS)

    Karabegov, Alexander V.

    1996-10-01

    We give a simple geometric description of all formal differentiable deformation quantizations on a Kähler manifold M such that for each open subset U⊂ M ⋆-multiplication from the left by a holomorphic function and from the right by an antiholomorphic function on U coincides with the pointwise multiplication by these functions. We show that these quantizations are in 1-1 correspondence with the formal deformations of the original Kähler metrics on M.

  8. Patient-specific geometrical modeling of orthopedic structures with high efficiency and accuracy for finite element modeling and 3D printing.

    PubMed

    Huang, Huajun; Xiang, Chunling; Zeng, Canjun; Ouyang, Hanbin; Wong, Kelvin Kian Loong; Huang, Wenhua

    2015-12-01

    We improved the geometrical modeling procedure for fast and accurate reconstruction of orthopedic structures. This procedure consists of medical image segmentation, three-dimensional geometrical reconstruction, and assignment of material properties. The patient-specific orthopedic structures reconstructed by this improved procedure can be used in the virtual surgical planning, 3D printing of real orthopedic structures and finite element analysis. A conventional modeling consists of: image segmentation, geometrical reconstruction, mesh generation, and assignment of material properties. The present study modified the conventional method to enhance software operating procedures. Patient's CT images of different bones were acquired and subsequently reconstructed to give models. The reconstruction procedures were three-dimensional image segmentation, modification of the edge length and quantity of meshes, and the assignment of material properties according to the intensity of gravy value. We compared the performance of our procedures to the conventional procedures modeling in terms of software operating time, success rate and mesh quality. Our proposed framework has the following improvements in the geometrical modeling: (1) processing time: (femur: 87.16 ± 5.90 %; pelvis: 80.16 ± 7.67 %; thoracic vertebra: 17.81 ± 4.36 %; P < 0.05); (2) least volume reduction (femur: 0.26 ± 0.06 %; pelvis: 0.70 ± 0.47, thoracic vertebra: 3.70 ± 1.75 %; P < 0.01) and (3) mesh quality in terms of aspect ratio (femur: 8.00 ± 7.38 %; pelvis: 17.70 ± 9.82 %; thoracic vertebra: 13.93 ± 9.79 %; P < 0.05) and maximum angle (femur: 4.90 ± 5.28 %; pelvis: 17.20 ± 19.29 %; thoracic vertebra: 3.86 ± 3.82 %; P < 0.05). Our proposed patient-specific geometrical modeling requires less operating time and workload, but the orthopedic structures were generated at a higher rate of success as compared with the conventional method. It is expected to benefit the surgical planning of orthopedic

  9. Damping Models for Shear-Deformable Beam with Applications to Spacecraft Wiring Harness

    DTIC Science & Technology

    2014-10-28

    AFRL-RV-PS- TR-2014-0189 AFRL-RV-PS- TR-2014-0189 DAMPING MODELS FOR SHEAR-DEFORMABLE BEAM WITH APPLICATIONS TO SPACECRAFT WIRING HARNESS ...Feb 2012 4. TITLE AND SUBTITLE Damping Models for Shear-Deformable Beam with Applications to Spacecraft Wiring Harness 5a. CONTRACT NUMBER FA9453-12...behavior of wiring harnesses . The emphasis in this project will be on the extension of the shear-beam damping model to the Timoshenko beam, a beam model

  10. A geometric modeler based on a dual-geometry representation polyhedra and rational b-splines

    NASA Technical Reports Server (NTRS)

    Klosterman, A. L.

    1984-01-01

    For speed and data base reasons, solid geometric modeling of large complex practical systems is usually approximated by a polyhedra representation. Precise parametric surface and implicit algebraic modelers are available but it is not yet practical to model the same level of system complexity with these precise modelers. In response to this contrast the GEOMOD geometric modeling system was built so that a polyhedra abstraction of the geometry would be available for interactive modeling without losing the precise definition of the geometry. Part of the reason that polyhedra modelers are effective is that all bounded surfaces can be represented in a single canonical format (i.e., sets of planar polygons). This permits a very simple and compact data structure. Nonuniform rational B-splines are currently the best representation to describe a very large class of geometry precisely with one canonical format. The specific capabilities of the modeler are described.

  11. Mathematical model of rolling an elastic wheel over deformable support base

    NASA Astrophysics Data System (ADS)

    Volskaia, V. N.; Zhileykin, M. M.; Zakharov, A. Y.

    2018-02-01

    One of the main direction of economic growth in Russia remains to be a speedy development of north and northeast regions that are the constituents of the 60 percent of the country territory. The further development of these territories requires new methods and technologies for solving transport and technological problems when off-road transportation of cargoes and people is conducting. One of the fundamental methods of patency prediction is imitation modeling of wheeled vehicles movement in different operating conditions. Both deformable properties of tires and physical and mechanical properties of the ground: normal tire deflection and gauge depth; variation of contact patch area depending on the load and pressure of air in the tire; existence of hysteresis losses in the tire material which are influencing on the rolling resistance due to friction processes between tire and ground in the contact patch; existence of the tangential reaction from the ground by entire contact area influence on the tractive patency. Nowadays there are two main trends in theoretical research of interaction wheeled propulsion device with ground: analytical method involving mathematical description of explored process and finite element method based on computational modeling. Mathematical models of interaction tire with the ground are used both in processes of interaction individual wheeled propulsion device with ground and researches of mobile vehicle dynamical models operated in specific road and climate conditions. One of the most significant imperfection of these models is the description of interaction wheel with flat deformable support base whereas profile of real support base surface has essential height of unevenness which is commensurate with radius of the wheel. The description of processes taking place in the ground under influence of the wheeled propulsion device using the finite element method is relatively new but most applicable lately. The application of this method allows

  12. Is there a geometric module for spatial orientation? Insights from a rodent navigation model.

    PubMed

    Sheynikhovich, Denis; Chavarriaga, Ricardo; Strösslin, Thomas; Arleo, Angelo; Gerstner, Wulfram

    2009-07-01

    Modern psychological theories of spatial cognition postulate the existence of a geometric module for reorientation. This concept is derived from experimental data showing that in rectangular arenas with distinct landmarks in the corners, disoriented rats often make diagonal errors, suggesting their preference for the geometric (arena shape) over the nongeometric (landmarks) cues. Moreover, sensitivity of hippocampal cell firing to changes in the environment layout was taken in support of the geometric module hypothesis. Using a computational model of rat navigation, the authors proposed and tested the alternative hypothesis that the influence of spatial geometry on both behavioral and neuronal levels can be explained by the properties of visual features that constitute local views of the environment. Their modeling results suggest that the pattern of diagonal errors observed in reorientation tasks can be understood by the analysis of sensory information processing that underlies the navigation strategy employed to solve the task. In particular, 2 navigation strategies were considered: (a) a place-based locale strategy that relies on a model of grid and place cells and (b) a stimulus-response taxon strategy that involves direct association of local views with action choices. The authors showed that the application of the 2 strategies in the reorientation tasks results in different patterns of diagonal errors, consistent with behavioral data. These results argue against the geometric module hypothesis by providing a simpler and biologically more plausible explanation for the related experimental data. Moreover, the same model also describes behavioral results in different types of water-maze tasks. Copyright (c) 2009 APA, all rights reserved.

  13. A machine learning approach for real-time modelling of tissue deformation in image-guided neurosurgery.

    PubMed

    Tonutti, Michele; Gras, Gauthier; Yang, Guang-Zhong

    2017-07-01

    Accurate reconstruction and visualisation of soft tissue deformation in real time is crucial in image-guided surgery, particularly in augmented reality (AR) applications. Current deformation models are characterised by a trade-off between accuracy and computational speed. We propose an approach to derive a patient-specific deformation model for brain pathologies by combining the results of pre-computed finite element method (FEM) simulations with machine learning algorithms. The models can be computed instantaneously and offer an accuracy comparable to FEM models. A brain tumour is used as the subject of the deformation model. Load-driven FEM simulations are performed on a tetrahedral brain mesh afflicted by a tumour. Forces of varying magnitudes, positions, and inclination angles are applied onto the brain's surface. Two machine learning algorithms-artificial neural networks (ANNs) and support vector regression (SVR)-are employed to derive a model that can predict the resulting deformation for each node in the tumour's mesh. The tumour deformation can be predicted in real time given relevant information about the geometry of the anatomy and the load, all of which can be measured instantly during a surgical operation. The models can predict the position of the nodes with errors below 0.3mm, beyond the general threshold of surgical accuracy and suitable for high fidelity AR systems. The SVR models perform better than the ANN's, with positional errors for SVR models reaching under 0.2mm. The results represent an improvement over existing deformation models for real time applications, providing smaller errors and high patient-specificity. The proposed approach addresses the current needs of image-guided surgical systems and has the potential to be employed to model the deformation of any type of soft tissue. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Modelling ground deformation patterns associated with volcanic processes at the Okataina Volcanic Centre

    NASA Astrophysics Data System (ADS)

    Holden, L.; Cas, R.; Fournier, N.; Ailleres, L.

    2017-09-01

    The Okataina Volcanic Centre (OVC) is one of two large active rhyolite centres in the modern Taupo Volcanic Zone (TVZ) in the North Island of New Zealand. It is located in a complex section of the Taupo rift, a tectonically active section of the TVZ. The most recent volcanic unrest at the OVC includes the 1315 CE Kaharoa and 1886 Tarawera eruptions. Current monitoring activity at the OVC includes the use of continuous GPS receivers (cGPS), lake levelling and seismographs. The ground deformation patterns preceding volcanic activity the OVC are poorly constrained and restricted to predictions from basic modelling and comparison to other volcanoes worldwide. A better understanding of the deformation patterns preceding renewed volcanic activity is essential to determine if observed deformation is related to volcanic, tectonic or hydrothermal processes. Such an understanding also means that the ability of the present day cGPS network to detect these deformation patterns can also be assessed. The research presented here uses the finite element (FE) modelling technique to investigate ground deformation patterns associated with magma accumulation and diking processes at the OVC in greater detail. A number of FE models are produced and tested using Pylith software and incorporate characteristics of the 1315 CE Kaharoa and 1886 Tarawera eruptions, summarised from the existing body of research literature. The influence of a simple ring fault structure at the OVC on the modelled deformation is evaluated. The ability of the present-day continuous GPS (cGPS) GeoNet monitoring network to detect or observe the modelled deformation is also considered. The results show the modelled horizontal and vertical displacement fields have a number of key features, which include prominent lobe based regions extending northwest and southeast of the OVC. The results also show that the ring fault structure increases the magnitude of the displacements inside the caldera, in particular in the

  15. Generation of synthetic image sequences for the verification of matching and tracking algorithms for deformation analysis

    NASA Astrophysics Data System (ADS)

    Bethmann, F.; Jepping, C.; Luhmann, T.

    2013-04-01

    This paper reports on a method for the generation of synthetic image data for almost arbitrary static or dynamic 3D scenarios. Image data generation is based on pre-defined 3D objects, object textures, camera orientation data and their imaging properties. The procedure does not focus on the creation of photo-realistic images under consideration of complex imaging and reflection models as they are used by common computer graphics programs. In contrast, the method is designed with main emphasis on geometrically correct synthetic images without radiometric impact. The calculation process includes photogrammetric distortion models, hence cameras with arbitrary geometric imaging characteristics can be applied. Consequently, image sets can be created that are consistent to mathematical photogrammetric models to be used as sup-pixel accurate data for the assessment of high-precision photogrammetric processing methods. In the first instance the paper describes the process of image simulation under consideration of colour value interpolation, MTF/PSF and so on. Subsequently the geometric quality of the synthetic images is evaluated with ellipse operators. Finally, simulated image sets are used to investigate matching and tracking algorithms as they have been developed at IAPG for deformation measurement in car safety testing.

  16. Creep model of unsaturated sliding zone soils and long-term deformation analysis of landslides

    NASA Astrophysics Data System (ADS)

    Zou, Liangchao; Wang, Shimei; Zhang, Yeming

    2015-04-01

    Sliding zone soil is a special soil layer formed in the development of a landslide. Its creep behavior plays a significant role in long-term deformation of landslides. Due to rainfall infiltration and reservoir water level fluctuation, the soils in the slide zone are often in unsaturated state. Therefore, the investigation of creep behaviors of the unsaturated sliding zone soils is of great importance for understanding the mechanism of the long-term deformation of a landslide in reservoir areas. In this study, the full-process creep curves of the unsaturated soils in the sliding zone in different net confining pressure, matric suctions and stress levels were obtained from a large number of laboratory triaxial creep tests. A nonlinear creep model for unsaturated soils and its three-dimensional form was then deduced based on the component model theory and unsaturated soil mechanics. This creep model was validated with laboratory creep data. The results show that this creep model can effectively and accurately describe the nonlinear creep behaviors of the unsaturated sliding zone soils. In order to apply this creep model to predict the long-term deformation process of landslides, a numerical model for simulating the coupled seepage and creep deformation of unsaturated sliding zone soils was developed based on this creep model through the finite element method (FEM). By using this numerical model, we simulated the deformation process of the Shuping landslide located in the Three Gorges reservoir area, under the cycling reservoir water level fluctuation during one year. The simulation results of creep displacement were then compared with the field deformation monitoring data, showing a good agreement in trend. The results show that the creeping deformations of landslides have strong connections with the changes of reservoir water level. The creep model of unsaturated sliding zone soils and the findings obtained by numerical simulations in this study are conducive to

  17. Integrated optical design for highly dynamic laser beam shaping with membrane deformable mirrors

    NASA Astrophysics Data System (ADS)

    Pütsch, Oliver; Stollenwerk, Jochen; Loosen, Peter

    2017-02-01

    The utilization of membrane deformable mirrors has raised its importance in laser materials processing since they enable the generation of highly spatial and temporal dynamic intensity distributions for a wide field of applications. To take full advantage of these devices for beam shaping, the huge amount of degrees of freedom has to be considered and optimized already within the early stage of the optical design. Since the functionality of commercial available ray-tracing software has been mainly specialized on geometric dependencies and their optimization within constraints, the complex system characteristics of deformable mirrors cannot be sufficiently taken into account yet. The main reasons are the electromechanical interdependencies of electrostatic membrane deformable mirrors, namely saturation and mechanical clamping, that result in non-linear deformation. This motivates the development of an integrative design methodology. The functionality of the ray-tracing program ZEMAX is extended with a model of an electrostatic membrane mirror. This model is based on experimentally determined influence functions. Furthermore, software routines are derived and integrated that allow for the compilation of optimization criteria for the most relevant analytically describable beam shaping problems. In this way, internal optimization routines can be applied for computing the appropriate membrane deflection of the deformable mirror as well as for the parametrization of static optical components. The experimental verification of simulated intensity distributions demonstrates that the beam shaping properties can be predicted with a high degree of reliability and precision.

  18. Deformation of two-phase aggregates using standard numerical methods

    NASA Astrophysics Data System (ADS)

    Duretz, Thibault; Yamato, Philippe; Schmalholz, Stefan M.

    2013-04-01

    Geodynamic problems often involve the large deformation of material encompassing material boundaries. In geophysical fluids, such boundaries often coincide with a discontinuity in the viscosity (or effective viscosity) field and subsequently in the pressure field. Here, we employ popular implementations of the finite difference and finite element methods for solving viscous flow problems. On one hand, we implemented finite difference method coupled with a Lagrangian marker-in-cell technique to represent the deforming fluid. Thanks to it Eulerian nature, this method has a limited geometric flexibility but is characterized by a light and stable discretization. On the other hand, we employ the Lagrangian finite element method which offers full geometric flexibility at the cost of relatively heavier discretization. In order to test the accuracy of the finite difference scheme, we ran large strain simple shear deformation of aggregates containing either weak of strong circular inclusion (1e6 viscosity ratio). The results, obtained for different grid resolutions, are compared to Lagrangian finite element results which are considered as reference solution. The comparison is then used to establish up to which strain can finite difference simulations be run given the nature of the inclusions (dimensions, viscosity) and the resolution of the Eulerian mesh.

  19. Half-Lives of Proton Emitters With a Deformed Density-Dependent Model

    NASA Astrophysics Data System (ADS)

    Qian, Yi-Bin; Ren, Zhong-Zhou; Ni, Dong-Dong; Sheng, Zong-Qiang

    2010-11-01

    Half-lives of proton radioactivity are investigated with a deformed density-dependent model. The single folding potential which is dependent on deformation and orientation is employed to calculate the proton decay width through the deformed potential barrier. In addition, the spectroscopic factor is taken into account in the calculation, which is obtained in the relativistic mean field theory with NL3. The calculated results of semi-spherical nuclei are found to be in good agreement with the experimental data, and the results of well-deformed nuclei are also satisfactory. Moreover, a formula for the spherical proton emission half-life based on the Gamow quantum tunneling theory is presented.

  20. Proximal metatarsal osteotomies: a comparative geometric analysis conducted on sawbone models.

    PubMed

    Nyska, Meir; Trnka, Hans-Jörg; Parks, Brent G; Myerson, Mark S

    2002-10-01

    We evaluated the change in position of the first metatarsal head using a three-dimensional digitizer on sawbone models. Crescentic, closing wedge, oblique shaft (Ludloff 8 degrees and 16 degrees), reverse oblique shaft (Mau 8 degrees and 16 degrees), rotational "Z" (Scarf), and proximal chevron osteotomies were performed and secured using 3-mm screws. The 16 degrees Ludloff provided the most lateral shift (9.5 mm) and angular correction (14.5 degrees) but also produced the most elevation (1.4 mm) and shortening (2.9 mm). The 8 degrees Ludloff provided lateral and angular corrections similar to those of the crescentic and closing wedge osteotomies with less elevation and shortening. Because the displacement osteotomies (Scarf, proximal chevron) provided less angular correction, the same lateral displacement, and less shortening than the basilar angular osteotomies, based upon this model they can be more reliably used for a patient with a mild to moderate deformity, a short first metatarsal, or an intermediate deformity with a large distal metatarsal articular angle. These results can serve as recommendations for selecting the optimal osteotomy with which to correct a deformation.

  1. How the continents deform: The evidence from tectonic geodesy

    USGS Publications Warehouse

    Thatcher, Wayne R.

    2009-01-01

    Space geodesy now provides quantitative maps of the surface velocity field within tectonically active regions, supplying constraints on the spatial distribution of deformation, the forces that drive it, and the brittle and ductile properties of continental lithosphere. Deformation is usefully described as relative motions among elastic blocks and is block-like because major faults are weaker than adjacent intact crust. Despite similarities, continental block kinematics differs from global plate tectonics: blocks are much smaller, typically ∼100–1000 km in size; departures from block rigidity are sometimes measurable; and blocks evolve over ∼1–10 Ma timescales, particularly near their often geometrically irregular boundaries. Quantitatively relating deformation to the forces that drive it requires simplifying assumptions about the strength distribution in the lithosphere. If brittle/elastic crust is strongest, interactions among blocks control the deformation. If ductile lithosphere is the stronger, its flow properties determine the surface deformation, and a continuum approach is preferable.

  2. Videogrammetric Model Deformation Measurement Technique for Wind Tunnel Applications

    NASA Technical Reports Server (NTRS)

    Barrows, Danny A.

    2006-01-01

    Videogrammetric measurement technique developments at NASA Langley were driven largely by the need to quantify model deformation at the National Transonic Facility (NTF). This paper summarizes recent wind tunnel applications and issues at the NTF and other NASA Langley facilities including the Transonic Dynamics Tunnel, 31-Inch Mach 10 Tunnel, 8-Ft high Temperature Tunnel, and the 20-Ft Vertical Spin Tunnel. In addition, several adaptations of wind tunnel techniques to non-wind tunnel applications are summarized. These applications include wing deformation measurements on vehicles in flight, determining aerodynamic loads based on optical elastic deformation measurements, measurements on ultra-lightweight and inflatable space structures, and the use of an object-to-image plane scaling technique to support NASA s Space Exploration program.

  3. Long-term Postseismic Deformation Following the 1964 Alaska Earthquake

    NASA Astrophysics Data System (ADS)

    Freymueller, J. T.; Cohen, S. C.; Hreinsdöttir, S.; Suito, H.

    2003-12-01

    Geodetic data provide a rich data set describing the postseismic deformation that followed the 1964 Alaska earthquake (Mw 9.2). This is particularly true for vertical deformation, since tide gauges and leveling surveys provide extensive spatial coverage. Leveling was carried out over all of the major roads of Alaska in 1964-65, and over the last several years we have resurveyed an extensive data set using GPS. Along Turnagain Arm of Cook Inlet, south of Anchorage, a trench-normal profile was surveyed repeatedly over the first decade after the earthquake, and many of these sites have been surveyed with GPS. After using a geoid model to correct for the difference between geometric and orthometric heights, the leveling+GPS surveys reveal up to 1.25 meters of uplift since 1964. The largest uplifts are concentrated in the northern part of the Kenai Peninsula, SW of Turnagain Arm. In some places, steep gradients in the cumulative uplift measurements point to a very shallow source for the deformation. The average 1964-late 1990s uplift rates were substantially higher than the present-day uplift rates, which rarely exceed 10 mm/yr. Both leveling and tide gauge data document a decay in uplift rate over time as the postseismic signal decreases. However, even today the postseismic deformation represents a substantial portion of the total observe deformation signal, illustrating that very long-lived postseismic deformation is an important element of the subduction zone earthquake cycle for the very largest earthquakes. This is in contrast to much smaller events, such as M~8 earthquakes, for which postseismic deformation in many cases decays within a few years. This suggests that the very largest earthquakes may excite different processes than smaller events.

  4. [Research progress on real-time deformable models of soft tissues for surgery simulation].

    PubMed

    Xu, Shaoping; Liu, Xiaoping; Zhang, Hua; Luo, Jie

    2010-04-01

    Biological tissues generally exhibit nonlinearity, anisotropy, quasi-incompressibility and viscoelasticity about material properties. Simulating the behaviour of elastic objects in real time is one of the current objectives of virtual surgery simulation which is still a challenge for researchers to accurately depict the behaviour of human tissues. In this paper, we present a classification of the different deformable models that have been developed. We present the advantages and disadvantages of each one. Finally, we make a comparison of deformable models and perform an evaluation of the state of the art and the future of deformable models.

  5. GEOMETRIC CROSS SECTIONS OF DUST AGGREGATES AND A COMPRESSION MODEL FOR AGGREGATE COLLISIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Suyama, Toru; Wada, Koji; Tanaka, Hidekazu

    2012-07-10

    Geometric cross sections of dust aggregates determine their coupling with disk gas, which governs their motions in protoplanetary disks. Collisional outcomes also depend on geometric cross sections of initial aggregates. In a previous paper, we performed three-dimensional N-body simulations of sequential collisions of aggregates composed of a number of sub-micron-sized icy particles and examined radii of gyration (and bulk densities) of the obtained aggregates. We showed that collisional compression of aggregates is not efficient and that aggregates remain fluffy. In the present study, we examine geometric cross sections of the aggregates. Their cross sections decrease due to compression as wellmore » as to their gyration radii. It is found that a relation between the cross section and the gyration radius proposed by Okuzumi et al. is valid for the compressed aggregates. We also refine the compression model proposed in our previous paper. The refined model enables us to calculate the evolution of both gyration radii and cross sections of growing aggregates and reproduces well our numerical results of sequential aggregate collisions. The refined model can describe non-equal-mass collisions as well as equal-mass cases. Although we do not take into account oblique collisions in the present study, oblique collisions would further hinder compression of aggregates.« less

  6. A multi-organ biomechanical model to analyze prostate deformation due to large deformation of the rectum

    NASA Astrophysics Data System (ADS)

    Brock, Kristy K.; Ménard, Cynthia; Hensel, Jennifer; Jaffray, David A.

    2006-03-01

    Magnetic resonance imaging (MRI) with an endorectal receiver coil (ERC) provides superior visualization of the prostate gland and its surrounding anatomy at the expense of large anatomical deformation. The ability to correct for this deformation is critical to integrate the MR images into the CT-based treatment planning for radiotherapy. The ability to quantify and understand the physiological motion due to large changes in rectal filling can also improve the precision of image-guided procedures. The purpose of this study was to understand the biomechanical relationship between the prostate, rectum, and bladder using a finite element-based multi-organ deformable image registration method, 'Morfeus' developed at our institution. Patients diagnosed with prostate cancer were enrolled in the study. Gold seed markers were implanted in the prostate and MR scans performed with the ERC in place and its surrounding balloon inflated to varying volumes (0-100cc). The prostate, bladder, and rectum were then delineated, converted into finite element models, and assigned appropriate material properties. Morfeus was used to assign surface interfaces between the adjacent organs and deform the bladder and rectum from one position to another, obtaining the position of the prostate through finite element analysis. This approach achieves sub-voxel accuracy of image co-registration in the context of a large ERC deformation, while providing a biomechanical understanding of the multi-organ physiological relationship between the prostate, bladder, and rectum. The development of a deformable registration strategy is essential to integrate the superior information offered in MR images into the treatment planning process.

  7. The relationship between digital model accuracy and time-dependent deformation of alginate impressions.

    PubMed

    Alcan, Toros; Ceylanoğlu, Cenk; Baysal, Bekir

    2009-01-01

    To investigate the effects of different storage periods of alginate impressions on digital model accuracy. A total of 105 impressions were taken from a master model with three different brands of alginates and were poured into stone models in five different storage periods. In all, 21 stone models were poured and immediately were scanned, and 21 digital models were prepared. The remaining 84 impressions were poured after 1, 2, 3, and 4 days, respectively. Five linear measurements were made by three researchers on the master model, the stone models, and the digital models. Time-dependent deformation of alginate impressions at different storage periods and the accuracy of traditional stone models and digital models were evaluated separately. Both the stone models and the digital models were highly correlated with the master model. Significant deformities in the alginate impressions were noted at different storage periods of 1 to 4 days. Alginate impressions of different brands also showed significant differences between each other on the first, third, and fourth days. Digital orthodontic models are as reliable as traditional stone models and probably will become the standard for orthodontic clinical use. Storing alginate impressions in sealed plastic bags for up to 4 days caused statistically significant deformation of alginate impressions, but the magnitude of these deformations did not appear to be clinically relevant and had no adverse effect on digital modeling.

  8. A skeleton family generator via physics-based deformable models.

    PubMed

    Krinidis, Stelios; Chatzis, Vassilios

    2009-01-01

    This paper presents a novel approach for object skeleton family extraction. The introduced technique utilizes a 2-D physics-based deformable model that parameterizes the objects shape. Deformation equations are solved exploiting modal analysis, and proportional to model physical characteristics, a different skeleton is produced every time, generating, in this way, a family of skeletons. The theoretical properties and the experiments presented demonstrate that obtained skeletons match to hand-labeled skeletons provided by human subjects, even in the presence of significant noise and shape variations, cuts and tears, and have the same topology as the original skeletons. In particular, the proposed approach produces no spurious branches without the need of any known skeleton pruning method.

  9. Modelling of the plastic deformation and primary creep of metals coupled with DC in terms of the synthetic theory of irrecoverable deformation

    NASA Astrophysics Data System (ADS)

    Rusinko, Andrew; Varga, Peter

    2018-04-01

    The paper deals with modelling of the plastic and creep deformation of metals coupled with current. The passage of DC manifests itself in the increase in creep deformation and leads to primary creep time shortening. With plastic deformation, a short electric impulse results in the step-wise decrease of stress (stress-drop) on the stress-strain diagram. To catch these phenomena, we utilize the synthetic theory of recoverable deformation. The constitutive equation of this theory is supplemented by a term taking into account the intensity of DC. Further, we introduce DC intensity into the function governing transient creep. As a result, we predict the parameters of transient creep and calculate the stress-drop as a function of current intensity. The model results show good agreement with experimental data.

  10. Modeling of deformation behavior and texture evolution in magnesium alloy using the intermediate $$\\phi$$-model

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, Dongsheng; Ahzi, Said; M'Guil, S. M.

    2014-01-06

    The viscoplastic intermediate phi-model was applied in this work to predict the deformation behavior and texture evolution in a magnesium alloy, an HCP material. We simulated the deformation behavior with different intergranular interaction strengths and compared the predicted results with available experimental results. In this approach, elasticity is neglected and the plastic deformation mechanisms are assumed as a combination of crystallographic slip and twinning systems. Tests are performed for rolling (plane strain compression) of random textured Mg polycrystal as well as for tensile and compressive tests on rolled Mg sheets. Simulated texture evolutions agree well with experimental data. Activities of twinning and slip, predicted by the intermediatemore » $$\\phi$$-model, reveal the strong anisotropic behavior during tension and compression of rolled sheets.« less

  11. Accuracy increase of the coordinate measurement based on the model production of geometrical parts specifications

    NASA Astrophysics Data System (ADS)

    Zlatkina, O. Yu

    2018-04-01

    There is a relationship between the service properties of component parts and their geometry; therefore, to predict and control the operational characteristics of parts and machines, it is necessary to measure their geometrical specifications. In modern production, a coordinate measuring machine is the advanced measuring instrument of the products geometrical specifications. The analysis of publications has shown that during the coordinate measurements the problems of choosing locating chart of parts and coordination have not been sufficiently studied. A special role in the coordination of the part is played by the coordinate axes informational content. Informational content is the sum of the degrees of freedom limited by the elementary item of a part. The coordinate planes of a rectangular coordinate system have different informational content (three, two, and one). The coordinate axes have informational content of four, two and zero. The higher the informational content of the coordinate plane or axis, the higher its priority for reading angular and linear coordinates is. The geometrical model production of the coordinate measurements object taking into account the information content of coordinate planes and coordinate axes allows us to clearly reveal the interrelationship of the coordinates of the deviations in location, sizes and deviations of their surfaces shape. The geometrical model helps to select the optimal locating chart of parts for bringing the machine coordinate system to the part coordinate system. The article presents an algorithm the model production of geometrical specifications using the example of the piston rod of a compressor.

  12. A GPU based high-resolution multilevel biomechanical head and neck model for validating deformable image registration

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Neylon, J., E-mail: jneylon@mednet.ucla.edu; Qi, X.; Sheng, K.

    Purpose: Validating the usage of deformable image registration (DIR) for daily patient positioning is critical for adaptive radiotherapy (RT) applications pertaining to head and neck (HN) radiotherapy. The authors present a methodology for generating biomechanically realistic ground-truth data for validating DIR algorithms for HN anatomy by (a) developing a high-resolution deformable biomechanical HN model from a planning CT, (b) simulating deformations for a range of interfraction posture changes and physiological regression, and (c) generating subsequent CT images representing the deformed anatomy. Methods: The biomechanical model was developed using HN kVCT datasets and the corresponding structure contours. The voxels inside amore » given 3D contour boundary were clustered using a graphics processing unit (GPU) based algorithm that accounted for inconsistencies and gaps in the boundary to form a volumetric structure. While the bony anatomy was modeled as rigid body, the muscle and soft tissue structures were modeled as mass–spring-damper models with elastic material properties that corresponded to the underlying contoured anatomies. Within a given muscle structure, the voxels were classified using a uniform grid and a normalized mass was assigned to each voxel based on its Hounsfield number. The soft tissue deformation for a given skeletal actuation was performed using an implicit Euler integration with each iteration split into two substeps: one for the muscle structures and the other for the remaining soft tissues. Posture changes were simulated by articulating the skeletal structure and enabling the soft structures to deform accordingly. Physiological changes representing tumor regression were simulated by reducing the target volume and enabling the surrounding soft structures to deform accordingly. Finally, the authors also discuss a new approach to generate kVCT images representing the deformed anatomy that accounts for gaps and antialiasing artifacts

  13. Non-rigid image registration using a statistical spline deformation model.

    PubMed

    Loeckx, Dirk; Maes, Frederik; Vandermeulen, Dirk; Suetens, Paul

    2003-07-01

    We propose a statistical spline deformation model (SSDM) as a method to solve non-rigid image registration. Within this model, the deformation is expressed using a statistically trained B-spline deformation mesh. The model is trained by principal component analysis of a training set. This approach allows to reduce the number of degrees of freedom needed for non-rigid registration by only retaining the most significant modes of variation observed in the training set. User-defined transformation components, like affine modes, are merged with the principal components into a unified framework. Optimization proceeds along the transformation components rather then along the individual spline coefficients. The concept of SSDM's is applied to the temporal registration of thorax CR-images using pattern intensity as the registration measure. Our results show that, using 30 training pairs, a reduction of 33% is possible in the number of degrees of freedom without deterioration of the result. The same accuracy as without SSDM's is still achieved after a reduction up to 66% of the degrees of freedom.

  14. A nonaffine network model for elastomers undergoing finite deformations

    NASA Astrophysics Data System (ADS)

    Davidson, Jacob D.; Goulbourne, N. C.

    2013-08-01

    In this work, we construct a new physics-based model of rubber elasticity to capture the strain softening, strain hardening, and deformation-state dependent response of rubber materials undergoing finite deformations. This model is unique in its ability to capture large-stretch mechanical behavior with parameters that are connected to the polymer chemistry and can also be easily identified with the important characteristics of the macroscopic stress-stretch response. The microscopic picture consists of two components: a crosslinked network of Langevin chains and an entangled network with chains confined to a nonaffine tube. These represent, respectively, changes in entropy due to thermally averaged chain conformations and changes in entropy due to the magnitude of these conformational fluctuations. A simple analytical form for the strain energy density is obtained using Rubinstein and Panyukov's single-chain description of network behavior. The model only depends on three parameters that together define the initial modulus, extent of strain softening, and the onset of strain hardening. Fits to large stretch data for natural rubber, silicone rubber, VHB 4905 (polyacrylate rubber), and b186 rubber (a carbon black-filled rubber) are presented, and a comparison is made with other similar constitutive models of large-stretch rubber elasticity. We demonstrate that the proposed model provides a complete description of elastomers undergoing large deformations for different applied loading configurations. Moreover, since the strain energy is obtained using a clear set of physical assumptions, this model may be tested and used to interpret the results of computer simulation and experiments on polymers of known microscopic structure.

  15. 3-D Deformation analysis via invariant geodetic obsevations.

    NASA Astrophysics Data System (ADS)

    Ardalan, A.; Esmaeili, R.

    2003-04-01

    In this paper a new method for 3-D deformation analysis based on invariant observations like distances and spatial angles is presented. Displacement field that is used in the classical deformation analysis is not reliable because the stability of the coordinate systems between successive epochs of observations cannot be guaranteed. On the contrary distances and spatial angles, i.e. measurements that are related to geometry between the constituent points of an object is independent of the definition of coordinate system. In this paper we have devised a new approach for the calculation of elements of the strain tensor directly from the geometrical observations such as angels and distances. This new method besides enjoys 3-D nature and as such guarantees the complete deformation study in 3-D space.

  16. Hubble space telescope observations and geometric models of compact multipolar planetary nebulae

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hsia, Chih-Hao; Chau, Wayne; Zhang, Yong

    2014-05-20

    We report high angular resolution Hubble Space Telescope observations of 10 compact planetary nebulae (PNs). Many interesting internal structures, including multipolar lobes, arcs, two-dimensional rings, tori, and halos, are revealed for the first time. These results suggest that multipolar structures are common among PNs, and these structures develop early in their evolution. From three-dimensional geometric models, we have determined the intrinsic dimensions of the lobes. Assuming the lobes are the result of interactions between later-developed fast winds and previously ejected asymptotic giant branch winds, the geometric structures of these PNs suggest that there are multiple phases of fast winds separatedmore » by temporal variations and/or directional changes. A scenario of evolution from lobe-dominated to cavity-dominated stages is presented. The results reported here will provide serious constraints on any dynamical models of PNs.« less

  17. Reconstructing 3D Face Model with Associated Expression Deformation from a Single Face Image via Constructing a Low-Dimensional Expression Deformation Manifold.

    PubMed

    Wang, Shu-Fan; Lai, Shang-Hong

    2011-10-01

    Facial expression modeling is central to facial expression recognition and expression synthesis for facial animation. In this work, we propose a manifold-based 3D face reconstruction approach to estimating the 3D face model and the associated expression deformation from a single face image. With the proposed robust weighted feature map (RWF), we can obtain the dense correspondences between 3D face models and build a nonlinear 3D expression manifold from a large set of 3D facial expression models. Then a Gaussian mixture model in this manifold is learned to represent the distribution of expression deformation. By combining the merits of morphable neutral face model and the low-dimensional expression manifold, a novel algorithm is developed to reconstruct the 3D face geometry as well as the facial deformation from a single face image in an energy minimization framework. Experimental results on simulated and real images are shown to validate the effectiveness and accuracy of the proposed algorithm.

  18. Origin of the vertebrate body plan via mechanically biased conservation of regular geometrical patterns in the structure of the blastula.

    PubMed

    Edelman, David B; McMenamin, Mark; Sheesley, Peter; Pivar, Stuart

    2016-09-01

    We present a plausible account of the origin of the archetypal vertebrate bauplan. We offer a theoretical reconstruction of the geometrically regular structure of the blastula resulting from the sequential subdivision of the egg, followed by mechanical deformations of the blastula in subsequent stages of gastrulation. We suggest that the formation of the vertebrate bauplan during development, as well as fixation of its variants over the course of evolution, have been constrained and guided by global mechanical biases. Arguably, the role of such biases in directing morphology-though all but neglected in previous accounts of both development and macroevolution-is critical to any substantive explanation for the origin of the archetypal vertebrate bauplan. We surmise that the blastula inherently preserves the underlying geometry of the cuboidal array of eight cells produced by the first three cleavages that ultimately define the medial-lateral, dorsal-ventral, and anterior-posterior axes of the future body plan. Through graphical depictions, we demonstrate the formation of principal structures of the vertebrate body via mechanical deformation of predictable geometrical patterns during gastrulation. The descriptive rigor of our model is supported through comparisons with previous characterizations of the embryonic and adult vertebrate bauplane. Though speculative, the model addresses the poignant absence in the literature of any plausible account of the origin of vertebrate morphology. A robust solution to the problem of morphogenesis-currently an elusive goal-will only emerge from consideration of both top-down (e.g., the mechanical constraints and geometric properties considered here) and bottom-up (e.g., molecular and mechano-chemical) influences. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  19. Simplified solution for point contact deformation between two elastic solids

    NASA Technical Reports Server (NTRS)

    Brewe, D. E.; Hamrock, B. J.

    1976-01-01

    A linear-regression by the method of least squares is made on the geometric variables that occur in the equation for point contact deformation. The ellipticity and the complete eliptic integrals of the first and second kind are expressed as a function of the x, y-plane principal radii. The ellipticity was varied from 1 (circular contact) to 10 (a configuration approaching line contact). These simplified equations enable one to calculate easily the point-contact deformation to within 3 percent without resorting to charts or numerical methods.

  20. Geomechanical Modeling of Deformation Banding in the Navajo Sandstone, San Rafael Monocline, Utah

    NASA Astrophysics Data System (ADS)

    Gutierrez, M.; Sundal, A.; Petrie, E. S.

    2017-12-01

    Deformation bands are ubiquitous geological features in many types of rocks. Depending on their micro-structure, they can act either as conduits or barriers to fluid flow. Given the significant roles deformation bands play in fluid flow and chemical transport in rocks, it is important to develop fundamental understanding of their origin, and their characteristics as they relate with the host rock properties and their depositional and structural-geological history. We present a forward-modeling technique based on the geomechanical Bifurcation Theory (BT) to predict the formation of deformation bands in sandstone. According to BT, the formation of deformation bands is a result of strain location, which in turn stems from instability in the stress-strain response of materials during loading. Due to bifurcation, a material which undergoes homogeneous deformation can reach a point at which the material experiences instability and deformation starts to become non-homogenous. We implemented BT in the commercially-available geomechanical code FLAC (Fast Langragian Analysis of Continua) and applied it in the field-scale modeling of deformation banding in the Navajo Sandstone in the San Rafael Monocline in Utah induced by fault propagation folding. The results show that geomechanical modeling using BT has a powerful potential to simulate the physical processes in the formation of deformation banding in rocks. Predicted deformation bands, specifically the pervasive bedding-parallel bands in the Navajo sandstone formation, normal faulting in the upper limb and reverse faulting in the lower limb, are generally in agreement with field observations. Predictions indicate that the pervasive bedding-parallel bands in the Navajo Sandstone are transitional compaction-shear bands with alternating zones of volumetric compaction and dilation. These predictions are consistent with petrographic analysis of thin sections of rock samples from the Navajo Sandstone. The most important

  1. Understanding and modeling volcanotectonic processes that generate surface deformation on active stratovolcanoes

    NASA Astrophysics Data System (ADS)

    Gudmundsson, A.

    2005-05-01

    Surface deformation on stratovolcanoes is the result of local stresses generated by various volcanotectonic processes. These processes include changes in fluid pressure in the associated geothermal fields and magma chambers, regional seismic or tectonic events, fault development, and dike injections. Here the focus is on magma-chamber pressure changes and dike injections. Surface deformation associated with magma-chamber pressure changes is normally referred to as inflation when the pressure increases, and as deflation when the pressure decreases. The processes that lead to inflation are primarily addition of new magma to the chamber and rapid exsolution of gas from the magma in the chamber. The processes that lead to deflation are primarily cooling (and contraction) of magma in the chamber, regional tectonic extension of the crust holding the chamber, and eruption and/or dike injection. Injection of dikes (including inclined sheets) is common in most active stratovolcanoes. However, no dike-fed eruptions can take place unless the local stress field within the volcano is favorable to feeder-dike formation. By contrast, if at any location - in any layer - in the stratovolcano the stress field is unfavorable to dike propagation, the dike becomes arrested and no eruption occurs. Detailed studies of dikes in stratovolcanoes worldwide indicate that most dikes become arrested and never reach the surface. However, arrested dikes may give rise to surface deformation, such as is commonly monitored during volcanic unrest periods. By definition, stratovolcanoes are composed of numerous alternating strata (layers) of pyroclastic material and lava flows. Commonly, these layers have widely different mechanical properties. In particular, some layers such as lava flows and welded pyroclastic flows may be stiff (with a high Young's modulus), whereas other layers, such as non-welded pyroclastic units, may be soft (with a low Young's modulus). Here I present new numerical models on

  2. Two Back Stress Hardening Models in Rate Independent Rigid Plastic Deformation

    NASA Astrophysics Data System (ADS)

    Yun, Su-Jin

    In the present work, the constitutive relations based on the combination of two back stresses are developed using the Armstrong-Frederick, Phillips and Ziegler’s type hardening rules. Various evolutions of the kinematic hardening parameter can be obtained by means of a simple combination of back stress rate using the rule of mixtures. Thus, a wide range of plastic deformation behavior can be depicted depending on the dominant back stress evolution. The ultimate back stress is also determined for the present combined kinematic hardening models. Since a kinematic hardening rule is assumed in the finite deformation regime, the stress rate is co-rotated with respect to the spin of substructure obtained by incorporating the plastic spin concept. A comparison of the various co-rotational rates is also included. Assuming rigid plasticity, the continuum body consists of the elastic deformation zone and the plastic deformation zone to form a hybrid finite element formulation. Then, the plastic deformation behavior is investigated under various loading conditions with an assumption of the J2 deformation theory. The plastic deformation localization turns out to be strongly dependent on the description of back stress evolution and its associated hardening parameters. The analysis for the shear deformation with fixed boundaries is carried out to examine the deformation localization behavior and the evolution of state variables.

  3. Bridge Structure Deformation Prediction Based on GNSS Data Using Kalman-ARIMA-GARCH Model

    PubMed Central

    Li, Xiaoqing; Wang, Yu

    2018-01-01

    Bridges are an essential part of the ground transportation system. Health monitoring is fundamentally important for the safety and service life of bridges. A large amount of structural information is obtained from various sensors using sensing technology, and the data processing has become a challenging issue. To improve the prediction accuracy of bridge structure deformation based on data mining and to accurately evaluate the time-varying characteristics of bridge structure performance evolution, this paper proposes a new method for bridge structure deformation prediction, which integrates the Kalman filter, autoregressive integrated moving average model (ARIMA), and generalized autoregressive conditional heteroskedasticity (GARCH). Firstly, the raw deformation data is directly pre-processed using the Kalman filter to reduce the noise. After that, the linear recursive ARIMA model is established to analyze and predict the structure deformation. Finally, the nonlinear recursive GARCH model is introduced to further improve the accuracy of the prediction. Simulation results based on measured sensor data from the Global Navigation Satellite System (GNSS) deformation monitoring system demonstrated that: (1) the Kalman filter is capable of denoising the bridge deformation monitoring data; (2) the prediction accuracy of the proposed Kalman-ARIMA-GARCH model is satisfactory, where the mean absolute error increases only from 3.402 mm to 5.847 mm with the increment of the prediction step; and (3) in comparision to the Kalman-ARIMA model, the Kalman-ARIMA-GARCH model results in superior prediction accuracy as it includes partial nonlinear characteristics (heteroscedasticity); the mean absolute error of five-step prediction using the proposed model is improved by 10.12%. This paper provides a new way for structural behavior prediction based on data processing, which can lay a foundation for the early warning of bridge health monitoring system based on sensor data using sensing

  4. Bridge Structure Deformation Prediction Based on GNSS Data Using Kalman-ARIMA-GARCH Model.

    PubMed

    Xin, Jingzhou; Zhou, Jianting; Yang, Simon X; Li, Xiaoqing; Wang, Yu

    2018-01-19

    Bridges are an essential part of the ground transportation system. Health monitoring is fundamentally important for the safety and service life of bridges. A large amount of structural information is obtained from various sensors using sensing technology, and the data processing has become a challenging issue. To improve the prediction accuracy of bridge structure deformation based on data mining and to accurately evaluate the time-varying characteristics of bridge structure performance evolution, this paper proposes a new method for bridge structure deformation prediction, which integrates the Kalman filter, autoregressive integrated moving average model (ARIMA), and generalized autoregressive conditional heteroskedasticity (GARCH). Firstly, the raw deformation data is directly pre-processed using the Kalman filter to reduce the noise. After that, the linear recursive ARIMA model is established to analyze and predict the structure deformation. Finally, the nonlinear recursive GARCH model is introduced to further improve the accuracy of the prediction. Simulation results based on measured sensor data from the Global Navigation Satellite System (GNSS) deformation monitoring system demonstrated that: (1) the Kalman filter is capable of denoising the bridge deformation monitoring data; (2) the prediction accuracy of the proposed Kalman-ARIMA-GARCH model is satisfactory, where the mean absolute error increases only from 3.402 mm to 5.847 mm with the increment of the prediction step; and (3) in comparision to the Kalman-ARIMA model, the Kalman-ARIMA-GARCH model results in superior prediction accuracy as it includes partial nonlinear characteristics (heteroscedasticity); the mean absolute error of five-step prediction using the proposed model is improved by 10.12%. This paper provides a new way for structural behavior prediction based on data processing, which can lay a foundation for the early warning of bridge health monitoring system based on sensor data using sensing

  5. Modelling and structural analysis of skull/cranial implant: beyond mid-line deformities.

    PubMed

    Bogu, V Phanindra; Kumar, Y Ravi; Kumar Khanara, Asit

    2017-01-01

    This computational study explores modelling and finite element study of the implant under Intracranial pressure (ICP) conditions with normal ICP range (7 mm Hg to 15 mm Hg) or increased ICP (>I5 mm Hg). The implant fixation points allow implant behaviour with respect to intracranial pressure conditions. However, increased fixation points lead to variation in deformation and equivalent stress. Finite element analysis is providing a valuable insight to know the deformation and equivalent stress. The patient CT data (Computed Tomography) is processed in Mimics software to get the mesh model. The implant is modelled by using modified reverse engineering technique with the help of Rhinoceros software. This modelling method is applicable for all types of defects including those beyond the middle line and multiple ones. It is designed with eight fixation points and ten fixation points to fix an implant. Consequently, the mechanical deformation and equivalent stress (von Mises) are calculated in ANSYS 15 software with distinctive material properties such as Titanium alloy (Ti6Al4V), Polymethyl methacrylate (PMMA) and polyether-ether-ketone (PEEK). The deformation and equivalent stress results are obtained through ANSYS 15 software. It is observed that Ti6Al4V material shows low deformation and PEEK material shows less equivalent stress. Among all materials PEEK shows noticeably good result. Hence, a concept was established and more clinically relevant results can be expected with implementation of realistic 3D printed model in the future. This will allow physicians to gain knowledge and decrease surgery time with proper planning.

  6. Modeling Thermal Transport and Surface Deformation on Europa using Realistic Rheologies

    NASA Astrophysics Data System (ADS)

    Linneman, D.; Lavier, L.; Becker, T. W.; Soderlund, K. M.

    2017-12-01

    Most existing studies of Europa's icy shell model the ice as a Maxwell visco-elastic solid or viscous fluid. However, these approaches do not allow for modeling of localized deformation of the brittle part of the ice shell, which is important for understanding the satellite's evolution and unique geology. Here, we model the shell as a visco-elasto-plastic material, with a brittle Mohr-Coulomb elasto-plastic layer on top of a convective Maxwell viscoelastic layer, to investigate how thermal transport processes relate to the observed deformation and topography on Europa's surface. We use Fast Lagrangian Analysis of Continua (FLAC) code, which employs an explicit time-stepping algorithm to simulate deformation processes in Europa's icy shell. Heat transfer drives surface deformation within the icy shell through convection and tidal dissipation due to its elliptical orbit around Jupiter. We first analyze the visco-elastic behavior of a convecting ice layer and the parameters that govern this behavior. The regime of deformation depends on the magnitude of the stress (diffusion creep at low stresses, grain-size-sensitive creep at intermediate stresses, dislocation creep at high stresses), so we calculate effective viscosity each time step using the constitutive stress-strain equation and a combined flow law that accounts for all types of deformation. Tidal dissipation rate is calculated as a function of the temperature-dependent Maxwell relaxation time and the square of the second invariant of the strain rate averaged over each orbital period. After we initiate convection in the viscoelastic layer by instituting an initial temperature perturbation, we then add an elastoplastic layer on top of the convecting layer and analyze how the brittle ice reacts to stresses from below and any resulting topography. We also take into account shear heating along fractures in the brittle layer. We vary factors such as total shell thickness and minimum viscosity, as these parameters are

  7. Modeling ultrasound propagation through material of increasing geometrical complexity.

    PubMed

    Odabaee, Maryam; Odabaee, Mostafa; Pelekanos, Matthew; Leinenga, Gerhard; Götz, Jürgen

    2018-06-01

    Ultrasound is increasingly being recognized as a neuromodulatory and therapeutic tool, inducing a broad range of bio-effects in the tissue of experimental animals and humans. To achieve these effects in a predictable manner in the human brain, the thick cancellous skull presents a problem, causing attenuation. In order to overcome this challenge, as a first step, the acoustic properties of a set of simple bone-modeling resin samples that displayed an increasing geometrical complexity (increasing step sizes) were analyzed. Using two Non-Destructive Testing (NDT) transducers, we found that Wiener deconvolution predicted the Ultrasound Acoustic Response (UAR) and attenuation caused by the samples. However, whereas the UAR of samples with step sizes larger than the wavelength could be accurately estimated, the prediction was not accurate when the sample had a smaller step size. Furthermore, a Finite Element Analysis (FEA) performed in ANSYS determined that the scattering and refraction of sound waves was significantly higher in complex samples with smaller step sizes compared to simple samples with a larger step size. Together, this reveals an interaction of frequency and geometrical complexity in predicting the UAR and attenuation. These findings could in future be applied to poro-visco-elastic materials that better model the human skull. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

  8. High Strain Rate Deformation Modeling of a Polymer Matrix Composite. Part 2; Composite Micromechanical Model

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.; Stouffer, Donald C.

    1998-01-01

    Recently applications have exposed polymer matrix composite materials to very high strain rate loading conditions, requiring an ability to understand and predict the material behavior under these extreme conditions. In this second paper of a two part report, a three-dimensional composite micromechanical model is described which allows for the analysis of the rate dependent, nonlinear deformation response of a polymer matrix composite. Strain rate dependent inelastic constitutive equations utilized to model the deformation response of a polymer are implemented within the micromechanics method. The deformation response of two representative laminated carbon fiber reinforced composite materials with varying fiber orientation has been predicted using the described technique. The predicted results compare favorably to both experimental values and the response predicted by the Generalized Method of Cells, a well-established micromechanics analysis method.

  9. Aeroelastic Deformation Measurements of Flap, Gap, and Overhang on a Semispan Model

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Liu, Tian-Shu; Garg, Sanjay; Ghee, Terence A.; Taylor, Nigel J.

    2001-01-01

    Single-camera, single-view videogrammetry has been used for the first time to determine static aeroelastic deformation of a slotted flap configuration on a semispan model at the National Transonic Facility (NTF). Deformation was determined by comparing wind-off to wind-on spatial data from targets placed on the main element, shroud, and flap of the model. Digitized video images from a camera were recorded and processed to automatically determine target image plane locations that were then corrected for sensor, lens, and frame grabber spatial errors. The videogrammetric technique used for the measurements presented here has been established at NASA facilities as the technique of choice when high-volume static aeroelastic data with minimum impact on data taking is required. However, the primary measurement at the NTF with this technique in the past has been the measurement of the static aeroelastic wing twist of the main wing element on full span models rather than for the measurement of component deformation. Considerations for using the videogrammetric technique for semispan component deformation measurements as well as representative results are presented.

  10. Template-Based Geometric Simulation of Flexible Frameworks

    PubMed Central

    Wells, Stephen A.; Sartbaeva, Asel

    2012-01-01

    Specialised modelling and simulation methods implementing simplified physical models are valuable generators of insight. Template-based geometric simulation is a specialised method for modelling flexible framework structures made up of rigid units. We review the background, development and implementation of the method, and its applications to the study of framework materials such as zeolites and perovskites. The “flexibility window” property of zeolite frameworks is a particularly significant discovery made using geometric simulation. Software implementing geometric simulation of framework materials, “GASP”, is freely available to researchers. PMID:28817055

  11. Analysis of Mining Terrain Deformation Characteristics with Deformation Information System

    NASA Astrophysics Data System (ADS)

    Blachowski, Jan; Milczarek, Wojciech; Grzempowski, Piotr

    2014-05-01

    Mapping and prediction of mining related deformations of the earth surface is an important measure for minimising threat to surface infrastructure, human population, the environment and safety of the mining operation itself arising from underground extraction of useful minerals. The number of methods and techniques used for monitoring and analysis of mining terrain deformations is wide and increasing with the development of geographical information technologies. These include for example: terrestrial geodetic measurements, global positioning systems, remote sensing, spatial interpolation, finite element method modelling, GIS based modelling, geological modelling, empirical modelling using the Knothe theory, artificial neural networks, fuzzy logic calculations and other. The aim of this paper is to introduce the concept of an integrated Deformation Information System (DIS) developed in geographic information systems environment for analysis and modelling of various spatial data related to mining activity and demonstrate its applications for mapping and visualising, as well as identifying possible mining terrain deformation areas with various spatial modelling methods. The DIS concept is based on connected modules that include: the spatial database - the core of the system, the spatial data collection module formed by: terrestrial, satellite and remote sensing measurements of the ground changes, the spatial data mining module for data discovery and extraction, the geological modelling module, the spatial data modeling module with data processing algorithms for spatio-temporal analysis and mapping of mining deformations and their characteristics (e.g. deformation parameters: tilt, curvature and horizontal strain), the multivariate spatial data classification module and the visualization module allowing two-dimensional interactive and static mapping and three-dimensional visualizations of mining ground characteristics. The Systems's functionality has been presented on

  12. A large deformation viscoelastic model for double-network hydrogels

    NASA Astrophysics Data System (ADS)

    Mao, Yunwei; Lin, Shaoting; Zhao, Xuanhe; Anand, Lallit

    2017-03-01

    We present a large deformation viscoelasticity model for recently synthesized double network hydrogels which consist of a covalently-crosslinked polyacrylamide network with long chains, and an ionically-crosslinked alginate network with short chains. Such double-network gels are highly stretchable and at the same time tough, because when stretched the crosslinks in the ionically-crosslinked alginate network rupture which results in distributed internal microdamage which dissipates a substantial amount of energy, while the configurational entropy of the covalently-crosslinked polyacrylamide network allows the gel to return to its original configuration after deformation. In addition to the large hysteresis during loading and unloading, these double network hydrogels also exhibit a substantial rate-sensitive response during loading, but exhibit almost no rate-sensitivity during unloading. These features of large hysteresis and asymmetric rate-sensitivity are quite different from the response of conventional hydrogels. We limit our attention to modeling the complex viscoelastic response of such hydrogels under isothermal conditions. Our model is restricted in the sense that we have limited our attention to conditions under which one might neglect any diffusion of the water in the hydrogel - as might occur when the gel has a uniform initial value of the concentration of water, and the mobility of the water molecules in the gel is low relative to the time scale of the mechanical deformation. We also do not attempt to model the final fracture of such double-network hydrogels.

  13. Inelastic deformation and phenomenological modeling of aluminum including transient effect

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cho, C.W.

    A review was made of several phenomenological theories which have recently been proposed to describe the inelastic deformation of crystalline solids. Hart's deformation theory has many advantages, but there are disagreements with experimental deformation at stress levels below yield. A new inelastic deformation theory was proposed, introducing the concept of microplasticity. The new model consists of five deformation elements: a friction element representing a deformation element controlled by dislocation glide, a nonrecoverable plastic element representing the dislocation leakage rate over the strong dislocation barriers, a microplastic element representing the dislocation leakage rate over the weak barriers, a short range anelasticmore » spring element representing the recoverable anelastic strain stored by piled-up dislocations against the weak barriers, and a long range anelastic spring element representing the recoverable strain stored by piled-up dislocations against the strong barriers. Load relaxation and tensile testing in the plastic range were used to determine the material parameters for the plastic friction elements. The short range and long range anelastic moduli and the material parameters for the kinetics of microplasticity were determined by the measurement of anelastic loops and by performing load relaxation tests in the microplastic region. Experimental results were compared with a computer simulation of the transient deformation behavior of commercial purity aluminum. An attempt was made to correlate the material parameters and the microstructure from TEM. Stability of material parameters during inelastic deformation was discussed and effect of metallurgical variables was examined experimentally. 71 figures, 5 tables.« less

  14. Process Modelling of Curing Process-Induced Internal Stress and Deformation of Composite Laminate Structure with Elastic and Viscoelastic Models

    NASA Astrophysics Data System (ADS)

    Li, Dongna; Li, Xudong; Dai, Jianfeng

    2018-06-01

    In this paper, two kinds of transient models, the viscoelastic model and the linear elastic model, are established to analyze the curing deformation of the thermosetting resin composites, and are calculated by COMSOL Multiphysics software. The two models consider the complicated coupling between physical and chemical changes during curing process of the composites and the time-variant characteristic of material performance parameters. Subsequently, the two proposed models are implemented respectively in a three-dimensional composite laminate structure, and a simple and convenient method of local coordinate system is used to calculate the development of residual stresses, curing shrinkage and curing deformation for the composite laminate. Researches show that the temperature, degree of curing (DOC) and residual stresses during curing process are consistent with the study in literature, so the curing shrinkage and curing deformation obtained on these basis have a certain referential value. Compared the differences between the two numerical results, it indicates that the residual stress and deformation calculated by the viscoelastic model are more close to the reference value than the linear elastic model.

  15. Prediction of water loss and viscoelastic deformation of apple tissue using a multiscale model.

    PubMed

    Aregawi, Wondwosen A; Abera, Metadel K; Fanta, Solomon W; Verboven, Pieter; Nicolai, Bart

    2014-11-19

    A two-dimensional multiscale water transport and mechanical model was developed to predict the water loss and deformation of apple tissue (Malus × domestica Borkh. cv. 'Jonagold') during dehydration. At the macroscopic level, a continuum approach was used to construct a coupled water transport and mechanical model. Water transport in the tissue was simulated using a phenomenological approach using Fick's second law of diffusion. Mechanical deformation due to shrinkage was based on a structural mechanics model consisting of two parts: Yeoh strain energy functions to account for non-linearity and Maxwell's rheological model of visco-elasticity. Apparent parameters of the macroscale model were computed from a microscale model. The latter accounted for water exchange between different microscopic structures of the tissue (intercellular space, the cell wall network and cytoplasm) using transport laws with the water potential as the driving force for water exchange between different compartments of tissue. The microscale deformation mechanics were computed using a model where the cells were represented as a closed thin walled structure. The predicted apparent water transport properties of apple cortex tissue from the microscale model showed good agreement with the experimentally measured values. Deviations between calculated and measured mechanical properties of apple tissue were observed at strains larger than 3%, and were attributed to differences in water transport behavior between the experimental compression tests and the simulated dehydration-deformation behavior. Tissue dehydration and deformation in the high relative humidity range ( > 97% RH) could, however, be accurately predicted by the multiscale model. The multiscale model helped to understand the dynamics of the dehydration process and the importance of the different microstructural compartments (intercellular space, cell wall, membrane and cytoplasm) for water transport and mechanical deformation.

  16. Stress and deformation characteristics of sea ice in a high resolution numerical sea ice model.

    NASA Astrophysics Data System (ADS)

    Heorton, Harry; Feltham, Daniel; Tsamados, Michel

    2017-04-01

    The drift and deformation of sea ice floating on the polar oceans is due to the applied wind and ocean currents. The deformations of sea ice over ocean basin length scales have observable patterns; cracks and leads in satellite images and within the velocity fields generated from floe tracking. In a climate sea ice model the deformation of sea ice over ocean basin length scales is modelled using a rheology that represents the relationship between stresses and deformation within the sea ice cover. Here we investigate the link between observable deformation characteristics and the underlying internal sea ice stresses and force balance using the Los Alamos numerical sea ice climate model. In order to mimic laboratory experiments on the deformation of small cubes of sea ice we have developed an idealised square domain that tests the model response at spatial resolutions of up to 500m. We use the Elastic Anisotropic Plastic and Elastic Viscous Plastic rheologies, comparing their stability over varying resolutions and time scales. Sea ice within the domain is forced by idealised winds in order to compare the confinement of wind stresses and internal sea ice stresses. We document the characteristic deformation patterns of convergent, divergent and rotating stress states.

  17. Geometric constraints on the space of N = 2 SCFTs. Part I: physical constraints on relevant deformations

    NASA Astrophysics Data System (ADS)

    Argyres, Philip; Lotito, Matteo; Lü, Yongchao; Martone, Mario

    2018-02-01

    We initiate a systematic study of four dimensional N = 2 superconformal field theories (SCFTs) based on the analysis of their Coulomb branch geometries. Because these SCFTs are not uniquely characterized by their scale-invariant Coulomb branch geometries we also need information on their deformations. We construct all inequivalent such deformations preserving N = 2 supersymmetry and additional physical consistency conditions in the rank 1 case. These not only include all the ones previously predicted by S-duality, but also 16 additional deformations satisfying all the known N = 2 low energy consistency conditions. All but two of these additonal deformations have recently been identified with new rank 1 SCFTs; these identifications are briefly reviewed. Some novel ingredients which are important for this study include: a discussion of RG-flows in the presence of a moduli space of vacua; a classification of local N = 2 supersymmetry-preserving deformations of unitary N = 2 SCFTs; and an analysis of charge normalizations and the Dirac quantization condition on Coulomb branches. This paper is the first in a series of three. The second paper [1] gives the details of the explicit construction of the Coulomb branch geometries discussed here, while the third [2] discusses the computation of central charges of the associated SCFTs.

  18. Modal Substructuring of Geometrically Nonlinear Finite Element Models with Interface Reduction

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

    Substructuring methods have been widely used in structural dynamics to divide large, complicated finite element models into smaller substructures. For linear systems, many methods have been developed to reduce the subcomponents down to a low order set of equations using a special set of component modes, and these are then assembled to approximate the dynamics of a large scale model. In this paper, a substructuring approach is developed for coupling geometrically nonlinear structures, where each subcomponent is drastically reduced to a low order set of nonlinear equations using a truncated set of fixedinterface and characteristic constraint modes. The method usedmore » to extract the coefficients of the nonlinear reduced order model (NLROM) is non-intrusive in that it does not require any modification to the commercial FEA code, but computes the NLROM from the results of several nonlinear static analyses. The NLROMs are then assembled to approximate the nonlinear differential equations of the global assembly. The method is demonstrated on the coupling of two geometrically nonlinear plates with simple supports at all edges. The plates are joined at a continuous interface through the rotational degrees-of-freedom (DOF), and the nonlinear normal modes (NNMs) of the assembled equations are computed to validate the models. The proposed substructuring approach reduces a 12,861 DOF nonlinear finite element model down to only 23 DOF, while still accurately reproducing the first three NNMs of the full order model.« less

  19. Modal Substructuring of Geometrically Nonlinear Finite Element Models with Interface Reduction

    DOE PAGES

    Kuether, Robert J.; Allen, Matthew S.; Hollkamp, Joseph J.

    2017-03-29

    Substructuring methods have been widely used in structural dynamics to divide large, complicated finite element models into smaller substructures. For linear systems, many methods have been developed to reduce the subcomponents down to a low order set of equations using a special set of component modes, and these are then assembled to approximate the dynamics of a large scale model. In this paper, a substructuring approach is developed for coupling geometrically nonlinear structures, where each subcomponent is drastically reduced to a low order set of nonlinear equations using a truncated set of fixedinterface and characteristic constraint modes. The method usedmore » to extract the coefficients of the nonlinear reduced order model (NLROM) is non-intrusive in that it does not require any modification to the commercial FEA code, but computes the NLROM from the results of several nonlinear static analyses. The NLROMs are then assembled to approximate the nonlinear differential equations of the global assembly. The method is demonstrated on the coupling of two geometrically nonlinear plates with simple supports at all edges. The plates are joined at a continuous interface through the rotational degrees-of-freedom (DOF), and the nonlinear normal modes (NNMs) of the assembled equations are computed to validate the models. The proposed substructuring approach reduces a 12,861 DOF nonlinear finite element model down to only 23 DOF, while still accurately reproducing the first three NNMs of the full order model.« less

  20. Phenomenological model for transient deformation based on state variables

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jackson, M S; Cho, C W; Alexopoulos, P

    The state variable theory of Hart, while providing a unified description of plasticity-dominated deformation, exhibits deficiencies when it is applied to transient deformation phenomena at stresses below yield. It appears that the description of stored anelastic strain is oversimplified. Consideration of a simple physical picture based on continuum dislocation pileups suggests that the neglect of weak barriers to dislocation motion is the source of these inadequacies. An appropriately modified description incorporating such barriers then allows the construction of a macroscopic model including transient effects. Although the flow relations for the microplastic element required in the new theory are not known,more » tentative assignments may be made for such functions. The model then exhibits qualitatively correct behavior when tensile, loading-unloading, reverse loading, and load relaxation tests are simulated. Experimental procedures are described for determining the unknown parameters and functions in the new model.« less

  1. A multiphase approach to model ultrafiltration of deformable colloids

    NASA Astrophysics Data System (ADS)

    Haribabu, Malavika; Dunstan, Dave; Davidson, Malcolm; Harvie, Dalton

    2017-11-01

    Ultrafiltration (UF) is widely used in the dairy industry to fractionate and concentrate proteins, during the manufacture of milk protein concentrate and cheese. The protein build-up, comprising casein micelles (CM) and whey proteins, at the membrane surface during UF increases the resistance of the membrane system, thereby decreasing the performance of the process unit. CM have a complex structure that hydrodynamically behaves as a hard-sphere when dilute, but deforms beyond the random packing limit, forming a shear-thinning gel. This study employs a mixture model, based on the mixture phase continuity, Navier-Stokes equations, and solids continuity equation, to predict the solid concentration and velocity distribution during UF of CM. Micelle deformation is modelled as a function of volume fraction and dependent on its elastic modulus and particle size. The effect of deformation on gel permeability is implemented via Happel's permeability for hard spheres. Under crossflow conditions, the gel thickness is observed to increase along the membrane length, followed by a decrease towards the end of the membrane, resulting in an increase in flux at the latter section of the membrane. This study demonstrates that the membrane end-effects are important in determining UF performance.

  2. Influence of the volume and density functions within geometric models for estimating trunk inertial parameters.

    PubMed

    Wicke, Jason; Dumas, Genevieve A

    2010-02-01

    The geometric method combines a volume and a density function to estimate body segment parameters and has the best opportunity for developing the most accurate models. In the trunk, there are many different tissues that greatly differ in density (e.g., bone versus lung). Thus, the density function for the trunk must be particularly sensitive to capture this diversity, such that accurate inertial estimates are possible. Three different models were used to test this hypothesis by estimating trunk inertial parameters of 25 female and 24 male college-aged participants. The outcome of this study indicates that the inertial estimates for the upper and lower trunk are most sensitive to the volume function and not very sensitive to the density function. Although it appears that the uniform density function has a greater influence on inertial estimates in the lower trunk region than in the upper trunk region, this is likely due to the (overestimated) density value used. When geometric models are used to estimate body segment parameters, care must be taken in choosing a model that can accurately estimate segment volumes. Researchers wanting to develop accurate geometric models should focus on the volume function, especially in unique populations (e.g., pregnant or obese individuals).

  3. Numerical treatment of a geometrically nonlinear planar Cosserat shell model

    NASA Astrophysics Data System (ADS)

    Sander, Oliver; Neff, Patrizio; Bîrsan, Mircea

    2016-05-01

    We present a new way to discretize a geometrically nonlinear elastic planar Cosserat shell. The kinematical model is similar to the general six-parameter resultant shell model with drilling rotations. The discretization uses geodesic finite elements (GFEs), which leads to an objective discrete model which naturally allows arbitrarily large rotations. GFEs of any approximation order can be constructed. The resulting algebraic problem is a minimization problem posed on a nonlinear finite-dimensional Riemannian manifold. We solve this problem using a Riemannian trust-region method, which is a generalization of Newton's method that converges globally without intermediate loading steps. We present the continuous model and the discretization, discuss the properties of the discrete model, and show several numerical examples, including wrinkling of thin elastic sheets in shear.

  4. Deformation and stress change associated with plate interaction at subduction zones: a kinematic modelling

    NASA Astrophysics Data System (ADS)

    Zhao, Shaorong; Takemoto, Shuzo

    2000-08-01

    The interseismic deformation associated with plate coupling at a subduction zone is commonly simulated by the steady-slip model in which a reverse dip-slip is imposed on the down-dip extension of the locked plate interface, or by the backslip model in which a normal slip is imposed on the locked plate interface. It is found that these two models, although totally different in principle, produce similar patterns for the vertical deformation at a subduction zone. This suggests that it is almost impossible to distinguish between these two models by analysing only the interseismic vertical deformation observed at a subduction zone. The steady-slip model cannot correctly predict the horizontal deformation associated with plate coupling at a subduction zone, a fact that is proved by both the numerical modelling in this study and the GPS (Global Positioning System) observations near the Nankai trough, southwest Japan. It is therefore inadequate to simulate the effect of the plate coupling at a subduction zone by the steady-slip model. It is also revealed that the unphysical assumption inherent in the backslip model of imposing a normal slip on the locked plate interface makes it impossible to predict correctly the horizontal motion of the subducted plate and the stress change within the overthrust zone associated with the plate coupling during interseismic stages. If the analysis made in this work is proved to be correct, some of the previous studies on interpreting the interseismic deformation observed at several subduction zones based on these two models might need substantial revision. On the basis of the investigations on plate interaction at subduction zones made using the finite element method and the kinematic/mechanical conditions of the plate coupling implied by the present plate tectonics, a synthesized model is proposed to simulate the kinematic effect of the plate interaction during interseismic stages. A numerical analysis shows that the proposed model

  5. Automated contouring error detection based on supervised geometric attribute distribution models for radiation therapy: A general strategy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chen, Hsin-Chen; Tan, Jun; Dolly, Steven

    2015-02-15

    Purpose: One of the most critical steps in radiation therapy treatment is accurate tumor and critical organ-at-risk (OAR) contouring. Both manual and automated contouring processes are prone to errors and to a large degree of inter- and intraobserver variability. These are often due to the limitations of imaging techniques in visualizing human anatomy as well as to inherent anatomical variability among individuals. Physicians/physicists have to reverify all the radiation therapy contours of every patient before using them for treatment planning, which is tedious, laborious, and still not an error-free process. In this study, the authors developed a general strategy basedmore » on novel geometric attribute distribution (GAD) models to automatically detect radiation therapy OAR contouring errors and facilitate the current clinical workflow. Methods: Considering the radiation therapy structures’ geometric attributes (centroid, volume, and shape), the spatial relationship of neighboring structures, as well as anatomical similarity of individual contours among patients, the authors established GAD models to characterize the interstructural centroid and volume variations, and the intrastructural shape variations of each individual structure. The GAD models are scalable and deformable, and constrained by their respective principal attribute variations calculated from training sets with verified OAR contours. A new iterative weighted GAD model-fitting algorithm was developed for contouring error detection. Receiver operating characteristic (ROC) analysis was employed in a unique way to optimize the model parameters to satisfy clinical requirements. A total of forty-four head-and-neck patient cases, each of which includes nine critical OAR contours, were utilized to demonstrate the proposed strategy. Twenty-nine out of these forty-four patient cases were utilized to train the inter- and intrastructural GAD models. These training data and the remaining fifteen testing

  6. Analysing surface deformation in Surabaya from sentinel-1A data using DInSAR method

    NASA Astrophysics Data System (ADS)

    Anjasmara, Ira Mutiara; Yusfania, Meiriska; Kurniawan, Akbar; Resmi, Awalina L. C.; Kurniawan, Roni

    2017-07-01

    The rapid population growth and increasing industrial space in the urban area of Surabaya have caused an excessive ground water use and load of infrastructures. This condition triggers surface deformation, especially the vertical deformation (subsidence or uplift), in Surabaya and its surroundings. The presence of dynamic processes of the Earth and geological form of Surabaya area can also fasten the rate of the surface deformation. In this research, Differential Interferometry Synthetic Aperture Radar (DInSAR) method is chosen to infer the surface deformation over Surabaya area. The DInSAR processing utilized Sentinel 1A satellite images from May 2015 to September 2016 using two-pass interferometric. Two-pass interferometric method is a method that uses two SAR imageries and Digital Elevation Model (DEM). The results from four pairs of DInSAR processing indicate the occurrence of surface deformation in the form of land subsidence and uplift based on the displacement Line of Sight (LOS) in Surabaya. The average rate of surface deformation from May 2015 to September 2016 varies from -3.52 mm/4months to +2.35 mm/4months. The subsidence mostly occurs along the coastal area. However, the result still contains errors from the processing of displacement, due to the value of coherence between the image, noise, geometric distortion of a radar signal and large baseline on image pair.

  7. Biomechanical deformable image registration of longitudinal lung CT images using vessel information

    NASA Astrophysics Data System (ADS)

    Cazoulat, Guillaume; Owen, Dawn; Matuszak, Martha M.; Balter, James M.; Brock, Kristy K.

    2016-07-01

    Spatial correlation of lung tissue across longitudinal images, as the patient responds to treatment, is a critical step in adaptive radiotherapy. The goal of this work is to expand a biomechanical model-based deformable registration algorithm (Morfeus) to achieve accurate registration in the presence of significant anatomical changes. Six lung cancer patients previously treated with conventionally fractionated radiotherapy were retrospectively evaluated. Exhale CT scans were obtained at treatment planning and following three weeks of treatment. For each patient, the planning CT was registered to the follow-up CT using Morfeus, a biomechanical model-based deformable registration algorithm. To model the complex response of the lung, an extension to Morfeus has been developed: an initial deformation was estimated with Morfeus consisting of boundary conditions on the chest wall and incorporating a sliding interface with the lungs. It was hypothesized that the addition of boundary conditions based on vessel tree matching would provide a robust reduction of the residual registration error. To achieve this, the vessel trees were segmented on the two images by thresholding a vesselness image based on the Hessian matrix’s eigenvalues. For each point on the reference vessel tree centerline, the displacement vector was estimated by applying a variant of the Demons registration algorithm between the planning CT and the deformed follow-up CT. An expert independently identified corresponding landmarks well distributed in the lung to compute target registration errors (TRE). The TRE was: 5.8+/- 2.9 , 3.4+/- 2.3 and 1.6+/- 1.3 mm after rigid registration, Morfeus and Morfeus with boundary conditions on the vessel tree, respectively. In conclusion, the addition of boundary conditions on the vessels significantly improved the accuracy in modeling the response of the lung and tumor over the course of radiotherapy. Minimizing and modeling these geometrical uncertainties will enable

  8. Geometrical Origins of Contractility in Disordered Actomyosin Networks

    NASA Astrophysics Data System (ADS)

    Lenz, Martin

    2014-10-01

    Movement within eukaryotic cells largely originates from localized forces exerted by myosin motors on scaffolds of actin filaments. Although individual motors locally exert both contractile and extensile forces, large actomyosin structures at the cellular scale are overwhelmingly contractile, suggesting that the scaffold serves to favor contraction over extension. While this mechanism is well understood in highly organized striated muscle, its origin in disordered networks such as the cell cortex is unknown. Here, we develop a mathematical model of the actin scaffold's local two- or three-dimensional mechanics and identify four competing contraction mechanisms. We predict that one mechanism dominates, whereby local deformations of the actin break the balance between contraction and extension. In this mechanism, contractile forces result mostly from motors plucking the filaments transversely rather than buckling them longitudinally. These findings shed light on recent in vitro experiments and provide a new geometrical understanding of contractility in the myriad of disordered actomyosin systems found in vivo.

  9. 3D geometric modeling and simulation of laser propagation through turbulence with plenoptic functions

    NASA Astrophysics Data System (ADS)

    Wu, Chensheng; Nelson, William; Davis, Christopher C.

    2014-10-01

    Plenoptic functions are functions that preserve all the necessary light field information of optical events. Theoretical work has demonstrated that geometric based plenoptic functions can serve equally well in the traditional wave propagation equation known as the "scalar stochastic Helmholtz equation". However, in addressing problems of 3D turbulence simulation, the dominant methods using phase screen models have limitations both in explaining the choice of parameters (on the transverse plane) in real-world measurements, and finding proper correlations between neighboring phase screens (the Markov assumption breaks down). Though possible corrections to phase screen models are still promising, the equivalent geometric approach based on plenoptic functions begins to show some advantages. In fact, in these geometric approaches, a continuous wave problem is reduced to discrete trajectories of rays. This allows for convenience in parallel computing and guarantees conservation of energy. Besides the pairwise independence of simulated rays, the assigned refractive index grids can be directly tested by temperature measurements with tiny thermoprobes combined with other parameters such as humidity level and wind speed. Furthermore, without loss of generality one can break the causal chain in phase screen models by defining regional refractive centers to allow rays that are less affected to propagate through directly. As a result, our work shows that the 3D geometric approach serves as an efficient and accurate method in assessing relevant turbulence problems with inputs of several environmental measurements and reasonable guesses (such as Cn 2 levels). This approach will facilitate analysis and possible corrections in lateral wave propagation problems, such as image de-blurring, prediction of laser propagation over long ranges, and improvement of free space optic communication systems. In this paper, the plenoptic function model and relevant parallel algorithm computing

  10. Rule-based spatial modeling with diffusing, geometrically constrained molecules.

    PubMed

    Gruenert, Gerd; Ibrahim, Bashar; Lenser, Thorsten; Lohel, Maiko; Hinze, Thomas; Dittrich, Peter

    2010-06-07

    We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our approach molecules possess a location in the reactor as well as an orientation and geometry, while the reactions are carried out according to a list of implicitly specified reaction rules. Because the reaction rules can contain patterns for molecules, a combinatorially complex or even infinitely sized reaction network can be defined. For our implementation (based on LAMMPS), we have chosen an already existing formalism (BioNetGen) for the implicit specification of the reaction network. This compatibility allows to import existing models easily, i.e., only additional geometry data files have to be provided. Our simulations show that the obtained dynamics can be fundamentally different from those simulations that use classical reaction-diffusion approaches like Partial Differential Equations or Gillespie-type spatial stochastic simulation. We show, for example, that the combination of combinatorial complexity and geometric effects leads to the emergence of complex self-assemblies and transportation phenomena happening faster than diffusion (using a model of molecular walkers on microtubules). When the mentioned classical simulation approaches are applied, these aspects of modeled systems cannot be observed without very special treatment. Further more, we show that the geometric information can even change the organizational structure of the reaction system. That is, a set of chemical species that can in principle form a stationary state in a Differential Equation formalism, is potentially unstable when geometry is considered, and vice versa. We conclude that our approach provides a new general framework filling a gap in between approaches with no or rigid spatial representation like Partial Differential Equations and specialized coarse-grained spatial simulation systems like those for DNA or virus capsid

  11. Rule-based spatial modeling with diffusing, geometrically constrained molecules

    PubMed Central

    2010-01-01

    Background We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our approach molecules possess a location in the reactor as well as an orientation and geometry, while the reactions are carried out according to a list of implicitly specified reaction rules. Because the reaction rules can contain patterns for molecules, a combinatorially complex or even infinitely sized reaction network can be defined. For our implementation (based on LAMMPS), we have chosen an already existing formalism (BioNetGen) for the implicit specification of the reaction network. This compatibility allows to import existing models easily, i.e., only additional geometry data files have to be provided. Results Our simulations show that the obtained dynamics can be fundamentally different from those simulations that use classical reaction-diffusion approaches like Partial Differential Equations or Gillespie-type spatial stochastic simulation. We show, for example, that the combination of combinatorial complexity and geometric effects leads to the emergence of complex self-assemblies and transportation phenomena happening faster than diffusion (using a model of molecular walkers on microtubules). When the mentioned classical simulation approaches are applied, these aspects of modeled systems cannot be observed without very special treatment. Further more, we show that the geometric information can even change the organizational structure of the reaction system. That is, a set of chemical species that can in principle form a stationary state in a Differential Equation formalism, is potentially unstable when geometry is considered, and vice versa. Conclusions We conclude that our approach provides a new general framework filling a gap in between approaches with no or rigid spatial representation like Partial Differential Equations and specialized coarse-grained spatial simulation systems like

  12. The geometric signature: Quantifying landslide-terrain types from digital elevation models

    USGS Publications Warehouse

    Pike, R.J.

    1988-01-01

    Topography of various types and scales can be fingerprinted by computer analysis of altitude matrices (digital elevation models, or DEMs). The critical analytic tool is the geometric signature, a set of measures that describes topographic form well enough to distinguish among geomorphically disparate landscapes. Different surficial processes create topography with diagnostic forms that are recognizable in the field. The geometric signature abstracts those forms from contour maps or their DEMs and expresses them numerically. This multivariate characterization enables once-in-tractable problems to be addressed. The measures that constitute a geometric signature express different but complementary attributes of topographic form. Most parameters used here are statistical estimates of central tendency and dispersion for five major categories of terrain geometry; altitude, altitude variance spectrum, slope between slope reversals, and slope and its curvature at fixed slope lengths. As an experimental application of geometric signatures, two mapped terrain types associated with different processes of shallow landsliding in Marin County, California, were distinguished consistently by a 17-variable description of topography from 21??21 DEMs (30-m grid spacing). The small matrix is a statistical window that can be used to scan large DEMs by computer, thus potentially automating the mapping of contrasting terrain types. The two types in Marin County host either (1) slow slides: earth flows and slump-earth flows, or (2) rapid flows: debris avalanches and debris flows. The signature approach should adapt to terrain taxonomy and mapping in other areas, where conditions differ from those in Central California. ?? 1988 International Association for Mathematical Geology.

  13. Soft tissue modelling through autowaves for surgery simulation.

    PubMed

    Zhong, Yongmin; Shirinzadeh, Bijan; Alici, Gursel; Smith, Julian

    2006-09-01

    Modelling of soft tissue deformation is of great importance to virtual reality based surgery simulation. This paper presents a new methodology for simulation of soft tissue deformation by drawing an analogy between autowaves and soft tissue deformation. The potential energy stored in a soft tissue as a result of a deformation caused by an external force is propagated among mass points of the soft tissue by non-linear autowaves. The novelty of the methodology is that (i) autowave techniques are established to describe the potential energy distribution of a deformation for extrapolating internal forces, and (ii) non-linear materials are modelled with non-linear autowaves other than geometric non-linearity. Integration with a haptic device has been achieved to simulate soft tissue deformation with force feedback. The proposed methodology not only deals with large-range deformations, but also accommodates isotropic, anisotropic and inhomogeneous materials by simply changing diffusion coefficients.

  14. BFV approach to geometric quantization

    NASA Astrophysics Data System (ADS)

    Fradkin, E. S.; Linetsky, V. Ya.

    1994-12-01

    A gauge-invariant approach to geometric quantization is developed. It yields a complete quantum description for dynamical systems with non-trivial geometry and topology of the phase space. The method is a global version of the gauge-invariant approach to quantization of second-class constraints developed by Batalin, Fradkin and Fradkina (BFF). Physical quantum states and quantum observables are respectively described by covariantly constant sections of the Fock bundle and the bundle of hermitian operators over the phase space with a flat connection defined by the nilpotent BVF-BRST operator. Perturbative calculation of the first non-trivial quantum correction to the Poisson brackets leads to the Chevalley cocycle known in deformation quantization. Consistency conditions lead to a topological quantization condition with metaplectic anomaly.

  15. Autophoretic locomotion from geometric asymmetry.

    PubMed

    Michelin, Sébastien; Lauga, Eric

    2015-02-01

    Among the few methods which have been proposed to create small-scale swimmers, those relying on self-phoretic mechanisms present an interesting design challenge in that chemical gradients are required to generate net propulsion. Building on recent work, we propose that asymmetries in geometry are sufficient to induce chemical gradients and swimming. We illustrate this idea using two different calculations. We first calculate exactly the self-propulsion speed of a system composed of two spheres of unequal sizes but identically chemically homogeneous. We then consider arbitrary, small-amplitude, shape deformations of a chemically homogeneous sphere, and calculate asymptotically the self-propulsion velocity induced by the shape asymmetries. Our results demonstrate how geometric asymmetries can be tuned to induce large locomotion speeds without the need of chemical patterning.

  16. The Role of Deformation Energetics in Long-Term Tectonic Modeling

    NASA Astrophysics Data System (ADS)

    Ahamed, S.; Choi, E.

    2017-12-01

    The deformation-related energy budget is usually considered in the simplest form or even entirely omitted from the energy balance equation. We derive a full energy balance equation that accounts not only for heat energy but also for mechanical (elastic, plastic and viscous) work. The derived equation is implemented in DES3D, an unstructured finite element solver for long-term tectonic deformation. We verify the implementation by comparing numerical solutions to the corresponding semi-analytic solutions in three benchmarks extended from the classical oedometer test. We also investigate the long-term effects of deformation energetics on the evolution of large offset normal faults. We find that the models considering the full energy balance equation tend to produce more secondary faults and an elongated core complex. Our results for the normal fault system confirm that persistent inelastic deformation has a significant impact on the long-term evolution of faults, motivating further exploration of the role of the full energy balance equation in other geodynamic systems.

  17. Brain shift computation using a fully nonlinear biomechanical model.

    PubMed

    Wittek, Adam; Kikinis, Ron; Warfield, Simon K; Miller, Karol

    2005-01-01

    In the present study, fully nonlinear (i.e. accounting for both geometric and material nonlinearities) patient specific finite element brain model was applied to predict deformation field within the brain during the craniotomy-induced brain shift. Deformation of brain surface was used as displacement boundary conditions. Application of the computed deformation field to align (i.e. register) the preoperative images with the intraoperative ones indicated that the model very accurately predicts the displacements of gravity centers of the lateral ventricles and tumor even for very limited information about the brain surface deformation. These results are sufficient to suggest that nonlinear biomechanical models can be regarded as one possible way of complementing medical image processing techniques when conducting nonrigid registration. Important advantage of such models over the linear ones is that they do not require unrealistic assumptions that brain deformations are infinitesimally small and brain tissue stress-strain relationship is linear.

  18. Methods for Geometric Data Validation of 3d City Models

    NASA Astrophysics Data System (ADS)

    Wagner, D.; Alam, N.; Wewetzer, M.; Pries, M.; Coors, V.

    2015-12-01

    Geometric quality of 3D city models is crucial for data analysis and simulation tasks, which are part of modern applications of the data (e.g. potential heating energy consumption of city quarters, solar potential, etc.). Geometric quality in these contexts is however a different concept as it is for 2D maps. In the latter case, aspects such as positional or temporal accuracy and correctness represent typical quality metrics of the data. They are defined in ISO 19157 and should be mentioned as part of the metadata. 3D data has a far wider range of aspects which influence their quality, plus the idea of quality itself is application dependent. Thus, concepts for definition of quality are needed, including methods to validate these definitions. Quality on this sense means internal validation and detection of inconsistent or wrong geometry according to a predefined set of rules. A useful starting point would be to have correct geometry in accordance with ISO 19107. A valid solid should consist of planar faces which touch their neighbours exclusively in defined corner points and edges. No gaps between them are allowed, and the whole feature must be 2-manifold. In this paper, we present methods to validate common geometric requirements for building geometry. Different checks based on several algorithms have been implemented to validate a set of rules derived from the solid definition mentioned above (e.g. water tightness of the solid or planarity of its polygons), as they were developed for the software tool CityDoctor. The method of each check is specified, with a special focus on the discussion of tolerance values where they are necessary. The checks include polygon level checks to validate the correctness of each polygon, i.e. closeness of the bounding linear ring and planarity. On the solid level, which is only validated if the polygons have passed validation, correct polygon orientation is checked, after self-intersections outside of defined corner points and edges

  19. Optimization of geometric parameters of heat exchange pipes pin finning

    NASA Astrophysics Data System (ADS)

    Akulov, K. A.; Golik, V. V.; Voronin, K. S.; Zakirzakov, A. G.

    2018-05-01

    The work is devoted to optimization of geometric parameters of the pin finning of heat-exchanging pipes. Pin fins were considered from the point of view of mechanics of a deformed solid body as overhang beams with a uniformly distributed load. It was found out under what geometric parameters of the nib (diameter and length); the stresses in it from the influence of the washer fluid will not exceed the yield strength of the material (aluminum). Optimal values of the geometric parameters of nibs were obtained for different velocities of the medium washed by them. As a flow medium, water and air were chosen, and the cross section of the nibs was round and square. Pin finning turned out to be more than 3 times more compact than circumferential finning, so its use makes it possible to increase the number of fins per meter of the heat-exchanging pipe. And it is well-known that this is the main method for increasing the heat transfer of a convective surface, giving them an indisputable advantage.

  20. Collision detection and modeling of rigid and deformable objects in laparoscopic simulator

    NASA Astrophysics Data System (ADS)

    Dy, Mary-Clare; Tagawa, Kazuyoshi; Tanaka, Hiromi T.; Komori, Masaru

    2015-03-01

    Laparoscopic simulators are viable alternatives for surgical training and rehearsal. Haptic devices can also be incorporated with virtual reality simulators to provide additional cues to the users. However, to provide realistic feedback, the haptic device must be updated by 1kHz. On the other hand, realistic visual cues, that is, the collision detection and deformation between interacting objects must be rendered at least 30 fps. Our current laparoscopic simulator detects the collision between a point on the tool tip, and on the organ surfaces, in which haptic devices are attached on actual tool tips for realistic tool manipulation. The triangular-mesh organ model is rendered using a mass spring deformation model, or finite element method-based models. In this paper, we investigated multi-point-based collision detection on the rigid tool rods. Based on the preliminary results, we propose a method to improve the collision detection scheme, and speed up the organ deformation reaction. We discuss our proposal for an efficient method to compute simultaneous multiple collision between rigid (laparoscopic tools) and deformable (organs) objects, and perform the subsequent collision response, with haptic feedback, in real-time.

  1. FISHER'S GEOMETRIC MODEL WITH A MOVING OPTIMUM

    PubMed Central

    Matuszewski, Sebastian; Hermisson, Joachim; Kopp, Michael

    2014-01-01

    Fisher's geometric model has been widely used to study the effects of pleiotropy and organismic complexity on phenotypic adaptation. Here, we study a version of Fisher's model in which a population adapts to a gradually moving optimum. Key parameters are the rate of environmental change, the dimensionality of phenotype space, and the patterns of mutational and selectional correlations. We focus on the distribution of adaptive substitutions, that is, the multivariate distribution of the phenotypic effects of fixed beneficial mutations. Our main results are based on an “adaptive-walk approximation,” which is checked against individual-based simulations. We find that (1) the distribution of adaptive substitutions is strongly affected by the ecological dynamics and largely depends on a single composite parameter γ, which scales the rate of environmental change by the “adaptive potential” of the population; (2) the distribution of adaptive substitution reflects the shape of the fitness landscape if the environment changes slowly, whereas it mirrors the distribution of new mutations if the environment changes fast; (3) in contrast to classical models of adaptation assuming a constant optimum, with a moving optimum, more complex organisms evolve via larger adaptive steps. PMID:24898080

  2. An atomistic geometrical model of the B-DNA configuration for DNA-radiation interaction simulations

    NASA Astrophysics Data System (ADS)

    Bernal, M. A.; Sikansi, D.; Cavalcante, F.; Incerti, S.; Champion, C.; Ivanchenko, V.; Francis, Z.

    2013-12-01

    In this paper, an atomistic geometrical model for the B-DNA configuration is explained. This model accounts for five organization levels of the DNA, up to the 30 nm chromatin fiber. However, fragments of this fiber can be used to construct the whole genome. The algorithm developed in this work is capable to determine which is the closest atom with respect to an arbitrary point in space. It can be used in any application in which a DNA geometrical model is needed, for instance, in investigations related to the effects of ionizing radiations on the human genetic material. Successful consistency checks were carried out to test the proposed model. Catalogue identifier: AEPZ_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEPZ_v1_0.html Program obtainable from: CPC Program Library, Queen’s University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 1245 No. of bytes in distributed program, including test data, etc.: 6574 Distribution format: tar.gz Programming language: FORTRAN. Computer: Any. Operating system: Multi-platform. RAM: 2 Gb Classification: 3. Nature of problem: The Monte Carlo method is used to simulate the interaction of ionizing radiation with the human genetic material in order to determine DNA damage yields per unit absorbed dose. To accomplish this task, an algorithm to determine if a given energy deposition lies within a given target is needed. This target can be an atom or any other structure of the genetic material. Solution method: This is a stand-alone subroutine describing an atomic-resolution geometrical model of the B-DNA configuration. It is able to determine the closest atom to an arbitrary point in space. This model accounts for five organization levels of the human genetic material, from the nucleotide pair up to the 30 nm chromatin fiber. This subroutine carries out a series of coordinate transformations

  3. Nonlinear finite element modeling of corrugated board

    Treesearch

    A. C. Gilchrist; J. C. Suhling; T. J. Urbanik

    1999-01-01

    In this research, an investigation on the mechanical behavior of corrugated board has been performed using finite element analysis. Numerical finite element models for corrugated board geometries have been created and executed. Both geometric (large deformation) and material nonlinearities were included in the models. The analyses were performed using the commercial...

  4. Modelling Polymer Deformation during 3D Printing

    NASA Astrophysics Data System (ADS)

    McIlroy, Claire; Olmsted, Peter

    Three-dimensional printing has the potential to transform manufacturing processes, yet improving the strength of printed parts, to equal that of traditionally-manufactured parts, remains an underlying issue. The fused deposition modelling technique involves melting a thermoplastic, followed by layer-by-layer extrusion to fabricate an object. The key to ensuring strength at the weld between layers is successful inter-diffusion. However, prior to welding, both the extrusion process and the cooling temperature profile can significantly deform the polymer micro-structure and, consequently, how well the polymers are able to ``re-entangle'' across the weld. In particular, polymer alignment in the flow can cause de-bonding of the layers and create defects. We have developed a simple model of the non-isothermal extrusion process to explore the effects that typical printing conditions and material rheology have on the conformation of a polymer melt. In particular, we incorporate both stretch and orientation using the Rolie-Poly constitutive equation to examine the melt structure as it flows through the nozzle, the subsequent alignment with the build plate and the resulting deformation due to the fixed nozzle height, which is typically less than the nozzle radius.

  5. Flows in forward deformable roll coating gaps: Comparison between spring and plane-strain models of roll cover

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carvalho, M.S.; Scriven, L.E.

    1997-12-01

    In this report the flow between rigid and a deformable rotating rolls fully submerged in a liquid pool is studied. The deformation of compliant roll cover is described by two different models (1) independent, radially oriented springs that deform in response to the traction force applied at the extremity of each or one-dimensional model, and (2) a plane-strain deformation of an incompressible Mooney-Rivlin material or non-linear elastic model. Based on the flow rate predictions of both models, an empirical relation between the spring constant of the one dimensional model and the roll cover thickness and elastic modulus is proposed.

  6. Neotectonic Deformation in Central Eurasia: A Geodynamic Model Approach

    NASA Astrophysics Data System (ADS)

    Tunini, Lavinia; Jiménez-Munt, Ivone; Fernandez, Manel; Vergés, Jaume; Bird, Peter

    2017-11-01

    Central Eurasia hosts wide orogenic belts of collision between India and Arabia with Eurasia, with diffuse or localized deformation occurring up to hundreds of kilometers from the primary plate boundaries. Although numerous studies have investigated the neotectonic deformation in central Eurasia, most of them have focused on limited segments of the orogenic systems. Here we explore the neotectonic deformation of all of central Eurasia, including both collision zones and the links between them. We use a thin-spherical sheet approach in which lithosphere strength is calculated from lithosphere structure and its thermal regime. We investigate the contributions of variations in lithospheric structure, rheology, boundary conditions, and fault friction coefficients on the predicted velocity and stress fields. Results (deformation pattern, surface velocities, tectonic stresses, and slip rates on faults) are constrained by independent observations of tectonic regime, GPS, and stress data. Our model predictions reproduce the counterclockwise rotation of Arabia and Iran, the westward escape of Anatolia, and the eastward extrusion of the northern Tibetan Plateau. To simulate the observed extensional faults in the Tibetan Plateau, a weaker lithosphere is required, provided by a change in the rheological parameters. The southward movement of the SE Tibetan Plateau can be explained by the combined effects of the Sumatra trench retreat, a thinner lithospheric mantle, and strik-slip faults in the region. This study offers a comprehensive model for regions with little or no data coverage, like the Arabia-India intercollision zone, where the surface velocity is northward showing no deflection related to Arabia and India indentations.

  7. Crustal deformation, the earthquake cycle, and models of viscoelastic flow in the asthenosphere

    NASA Technical Reports Server (NTRS)

    Cohen, S. C.; Kramer, M. J.

    1983-01-01

    The crustal deformation patterns associated with the earthquake cycle can depend strongly on the rheological properties of subcrustal material. Substantial deviations from the simple patterns for a uniformly elastic earth are expected when viscoelastic flow of subcrustal material is considered. The detailed description of the deformation pattern and in particular the surface displacements, displacement rates, strains, and strain rates depend on the structure and geometry of the material near the seismogenic zone. The origin of some of these differences are resolved by analyzing several different linear viscoelastic models with a common finite element computational technique. The models involve strike-slip faulting and include a thin channel asthenosphere model, a model with a varying thickness lithosphere, and a model with a viscoelastic inclusion below the brittle slip plane. The calculations reveal that the surface deformation pattern is most sensitive to the rheology of the material that lies below the slip plane in a volume whose extent is a few times the fault depth. If this material is viscoelastic, the surface deformation pattern resembles that of an elastic layer lying over a viscoelastic half-space. When the thickness or breath of the viscoelastic material is less than a few times the fault depth, then the surface deformation pattern is altered and geodetic measurements are potentially useful for studying the details of subsurface geometry and structure. Distinguishing among the various models is best accomplished by making geodetic measurements not only near the fault but out to distances equal to several times the fault depth. This is where the model differences are greatest; these differences will be most readily detected shortly after an earthquake when viscoelastic effects are most pronounced.

  8. Geometrical optics modeling of the grating-slit test.

    PubMed

    Liang, Chao-Wen; Sasian, Jose

    2007-02-19

    A novel optical testing method termed the grating-slit test is discussed. This test uses a grating and a slit, as in the Ronchi test, but the grating-slit test is different in that the grating is used as the incoherent illuminating object instead of the spatial filter. The slit is located at the plane of the image of a sinusoidal intensity grating. An insightful geometrical-optics model for the grating-slit test is presented and the fringe contrast ratio with respect to the slit width and object-grating period is obtained. The concept of spatial bucket integration is used to obtain the fringe contrast ratio.

  9. Intraplate Crustal Deformation Within the Northern Sinai Microplate: Evidence from Paleomagnetic Directions and Mechanical Modeling

    NASA Astrophysics Data System (ADS)

    Dembo, N.; Granot, R.; Hamiel, Y.

    2017-12-01

    The intraplate crustal deformation found in the northern part of the Sinai Microplate, located near the northern Dead Sea Fault plate boundary, is examined. Previous studies have suggested that distributed deformation in Lebanon is accommodated by regional uniform counterclockwise rigid block rotations. However, remanent magnetization directions observed near the Lebanese restraining bend are not entirely homogeneous suggesting that an unexplained and complex internal deformation pattern exists. In order to explain the variations in the amount of vertical-axis rotations we construct a mechanical model of the major active faults in the region that simulates the rotational deformation induced by motion along these faults. The rotational pattern calculated by the mechanical modeling predicts heterogeneous distribution of rotations around the faults. The combined rotation field that considers both the fault induced rotations and the already suggested regional block rotations stands in general agreement with the observed magnetization directions. Overall, the modeling results provide a more detailed and complete picture of the deformation pattern in this region and show that rotations induced by motion along the Dead Sea Fault act in parallel to rigid block rotations. Finally, the new modeling results unravel important insights as to the fashion in which crustal deformation is distributed within the northern part of the Sinai Microplate and propose an improved deformational mechanism that might be appropriate for other plate margins as well.

  10. Semi-physical Simulation of the Airborne InSAR based on Rigorous Geometric Model and Real Navigation Data

    NASA Astrophysics Data System (ADS)

    Changyong, Dou; Huadong, Guo; Chunming, Han; yuquan, Liu; Xijuan, Yue; Yinghui, Zhao

    2014-03-01

    Raw signal simulation is a useful tool for the system design, mission planning, processing algorithm testing, and inversion algorithm design of Synthetic Aperture Radar (SAR). Due to the wide and high frequent variation of aircraft's trajectory and attitude, and the low accuracy of the Position and Orientation System (POS)'s recording data, it's difficult to quantitatively study the sensitivity of the key parameters, i.e., the baseline length and inclination, absolute phase and the orientation of the antennas etc., of the airborne Interferometric SAR (InSAR) system, resulting in challenges for its applications. Furthermore, the imprecise estimation of the installation offset between the Global Positioning System (GPS), Inertial Measurement Unit (IMU) and the InSAR antennas compounds the issue. An airborne interferometric SAR (InSAR) simulation based on the rigorous geometric model and real navigation data is proposed in this paper, providing a way for quantitatively studying the key parameters and for evaluating the effect from the parameters on the applications of airborne InSAR, as photogrammetric mapping, high-resolution Digital Elevation Model (DEM) generation, and surface deformation by Differential InSAR technology, etc. The simulation can also provide reference for the optimal design of the InSAR system and the improvement of InSAR data processing technologies such as motion compensation, imaging, image co-registration, and application parameter retrieval, etc.

  11. Improved Rubin-Bodner Model for the Prediction of Soft Tissue Deformations

    PubMed Central

    Zhang, Guangming; Xia, James J.; Liebschner, Michael; Zhang, Xiaoyan; Kim, Daeseung; Zhou, Xiaobo

    2016-01-01

    In craniomaxillofacial (CMF) surgery, a reliable way of simulating the soft tissue deformation resulted from skeletal reconstruction is vitally important for preventing the risks of facial distortion postoperatively. However, it is difficult to simulate the soft tissue behaviors affected by different types of CMF surgery. This study presents an integrated bio-mechanical and statistical learning model to improve accuracy and reliability of predictions on soft facial tissue behavior. The Rubin-Bodner (RB) model is initially used to describe the biomechanical behavior of the soft facial tissue. Subsequently, a finite element model (FEM) computers the stress of each node in soft facial tissue mesh data resulted from bone displacement. Next, the Generalized Regression Neural Network (GRNN) method is implemented to obtain the relationship between the facial soft tissue deformation and the stress distribution corresponding to different CMF surgical types and to improve evaluation of elastic parameters included in the RB model. Therefore, the soft facial tissue deformation can be predicted by biomechanical properties and statistical model. Leave-one-out cross-validation is used on eleven patients. As a result, the average prediction error of our model (0.7035mm) is lower than those resulting from other approaches. It also demonstrates that the more accurate bio-mechanical information the model has, the better prediction performance it could achieve. PMID:27717593

  12. Algebro-geometric approach for a centrally extended Uq[sl(2|2)] R-matrix

    NASA Astrophysics Data System (ADS)

    Martins, M. J.

    2017-04-01

    In this paper we investigate the algebraic geometric nature of a solution of the Yang-Baxter equation based on the quantum deformation of the centrally extended sl (2 | 2) superalgebra proposed by Beisert and Koroteev [1]. We derive an alternative representation for the R-matrix in which the matrix elements are given in terms of rational functions depending on weights sited on a degree six surface. For generic gauge the weights geometry are governed by a genus one ruled surface while for a symmetric gauge choice the weights lie instead on a genus five curve. We have written down the polynomial identities satisfied by the R-matrix entries needed to uncover the corresponding geometric properties. For arbitrary gauge the R-matrix geometry is argued to be birational to the direct product CP1 ×CP1 × A where A is an Abelian surface. For the symmetric gauge we present evidences that the geometric content is that of a surface of general type lying on the so-called Severi line with irregularity two and geometric genus nine. We discuss potential geometric degenerations when the two free couplings are restricted to certain one-dimensional subspaces.

  13. Trench curvature and deformation of the subducting lithosphere

    NASA Astrophysics Data System (ADS)

    Schettino, Antonio; Tassi, Luca

    2012-01-01

    The subduction of oceanic lithosphere is generally accompanied by downdip and lateral deformation. The downdip component of strain is associated with external forces that are applied to the slab during its sinking, namely the gravitational force and the mantle resistance to penetration. Here, we present theoretical arguments showing that a tectonic plate is also subject to a predictable amount of lateral deformation as a consequence of its bending along an arcuate trench zone, independently from the long-term physical processes that have determined the actual curvature of the subduction zone. In particular, we show that the state of lateral strain and the lateral strain rate of a subducting slab depend from geometric and kinematic parameters, such as trench curvature, dip function and subduction velocity. We also demonstrate that the relationship between the state of lateral strain in a subducting slab and the geometry of bending at the corresponding active margin implies a small component of lateral shortening at shallow depths, and may include large extensional lateral deformation at intermediate depths, whereas a state of lateral mechanical equilibrium can only represent a localized exception. Our formulation overcomes the flaws of the classic 'ping-pong ball' model for the bending of the lithosphere at subduction zones, which lead to severe discrepancies with the observed geometry and style of deformation of the modern subducting slabs. A study of the geometry and seismicity of eight modern subduction zones is performed, to assess the validity of the theoretical relationship between trench curvature, slab dip function, and lateral strain rate. The strain pattern within the eight present-day slabs, which is reconstructed through an analysis of Harvard CMT solutions, shows that tectonic plates cannot be considered as flexible-inextensible spherical caps, whereas the lateral intraslab deformation which is accommodated through seismic slip can be explained in terms

  14. Lie group model neuromorphic geometric engine for real-time terrain reconstruction from stereoscopic aerial photos

    NASA Astrophysics Data System (ADS)

    Tsao, Thomas R.; Tsao, Doris

    1997-04-01

    In the 1980's, neurobiologist suggested a simple mechanism in primate visual cortex for maintaining a stable and invariant representation of a moving object. The receptive field of visual neurons has real-time transforms in response to motion, to maintain a stable representation. When the visual stimulus is changed due to motion, the geometric transform of the stimulus triggers a dual transform of the receptive field. This dual transform in the receptive fields compensates geometric variation in the stimulus. This process can be modelled using a Lie group method. The massive array of affine parameter sensing circuits will function as a smart sensor tightly coupled to the passive imaging sensor (retina). Neural geometric engine is a neuromorphic computing device simulating our Lie group model of spatial perception of primate's primal visual cortex. We have developed the computer simulation and experimented on realistic and synthetic image data, and performed a preliminary research of using analog VLSI technology for implementation of the neural geometric engine. We have benchmark tested on DMA's terrain data with their result and have built an analog integrated circuit to verify the computational structure of the engine. When fully implemented on ANALOG VLSI chip, we will be able to accurately reconstruct a 3D terrain surface in real-time from stereoscopic imagery.

  15. Volcanoes Behave as Composite Materials: Implications for Modeling Magma Chambers, Dikes, and Surface Deformation

    NASA Astrophysics Data System (ADS)

    Leiss, B.; Gudmundsson, A.; Philipp, S. L.

    2005-12-01

    By definition, composite volcanoes are composed of numerous alternating material units or layers such as lavas, sediments, and pyroclastics. Commonly, these layers have widely different mechanical properties. In particular, some lava flows and welded pyroclastic flows may be stiff (with a high Young's modulus), whereas others, such as non-welded pyroclastic units and sediments, may be soft (with a low Young's modulus). As a consequence, even if the loading (tectonic stress, magmatic pressure, or displacement) is uniform, the stresses within the composite volcano will vary widely. In this sense, the behavior of composite volcanoes is similar to that of general composite materials. The deformation of the surface of a volcano during an unrest period results from stresses generated by processes and parameters such as fluid pressure in a geothermal field or a magma chamber, a regional tectonic event, and a dike injection. Here we present new numerical models on mechanics of magma chambers and dikes, and the associated surface deformation of composite volcanoes. The models show that the surface deformation during magma-chamber inflation and deflation depends much on the chamber geometry, the loading conditions, and the mechanical properties of the rock units that constitute the volcano. The models also indicate that the surface deformation induced by a propagating dike depends much on the mechanical properties of the layers between the dike tip and the surface. In particular, the numerical results show that soft layers and weak contacts between layers may suppress the dike-induced tensile stresses and the associated surface deformation. Many dikes may therefore become injected and arrested at shallow depths in a volcano while giving rise to little or no surface deformation. Traditional analytical surface-deformation models such as a point source (Mogi model) for a magma-chamber pressure change and a dislocation for a dike normally assume the volcano to behave as a

  16. Analytical Modeling of the High Strain Rate Deformation of Polymer Matrix Composites

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.; Roberts, Gary D.; Gilat, Amos

    2003-01-01

    The results presented here are part of an ongoing research program to develop strain rate dependent deformation and failure models for the analysis of polymer matrix composites subject to high strain rate impact loads. State variable constitutive equations originally developed for metals have been modified in order to model the nonlinear, strain rate dependent deformation of polymeric matrix materials. To account for the effects of hydrostatic stresses, which are significant in polymers, the classical 5 plasticity theory definitions of effective stress and effective plastic strain are modified by applying variations of the Drucker-Prager yield criterion. To verify the revised formulation, the shear and tensile deformation of a representative toughened epoxy is analyzed across a wide range of strain rates (from quasi-static to high strain rates) and the results are compared to experimentally obtained values. For the analyzed polymers, both the tensile and shear stress-strain curves computed using the analytical model correlate well with values obtained through experimental tests. The polymer constitutive equations are implemented within a strength of materials based micromechanics method to predict the nonlinear, strain rate dependent deformation of polymer matrix composites. In the micromechanics, the unit cell is divided up into a number of independently analyzed slices, and laminate theory is then applied to obtain the effective deformation of the unit cell. The composite mechanics are verified by analyzing the deformation of a representative polymer matrix composite (composed using the representative polymer analyzed for the correlation of the polymer constitutive equations) for several fiber orientation angles across a variety of strain rates. The computed values compare favorably to experimentally obtained results.

  17. Analysis and Modeling of Process of Residual Deformations Accumulation in Soils and Granular Materials

    NASA Astrophysics Data System (ADS)

    Aleksandrov, A. S.; Dolgih, G. V.; Kalinin, A. L.

    2017-11-01

    It is established that under the influence of repeated loads the process of plastic deformation in soils and discrete materials is hereditary. To perform the mathematical modeling of plastic deformation, the authors applied the integral equation by solution of which they manage to obtain the power and logarithmic dependencies connecting plastic deformation with the number of repeated loads, the parameters of the material and components of the stress tensor in the principal axes. It is shown that these dependences generalize a number of models proposed earlier in Russia and abroad. Based on the analysis of the experimental data obtained during material testing in the dynamic devices of triaxial compression at different values of the stress deviator, the coefficients in the proposed models of deformation are determined. The authors determined the application domain for logarithmic and degree dependences.

  18. A new approach to geometrical measurements in an animal model of vocal fold scar.

    PubMed

    Jabbour, Noel; Krishna, Priya D; Osborne, James; Rosen, Clark A

    2009-01-01

    A standard method for quantifying the geometric properties of vocal folds has not been widely adopted. An ideal method of geometrical measurement should effectively quantify the dimensions of the medial vibratory portion of the vocal fold, should be easily performed, should yield consistent results, and should be readily available at little to no cost. We have developed a new approach for geometrical measurements to meet these goals. The objective of this study is to describe this new approach and to assess its effectiveness in a canine model of vocal fold scar. One hundred thirty-five mid-membranous coronal sections of vocal folds from 10 canines (five with unilateral surgical scarring) were examined by light microscopy; digital images were captured. ImageJ was used to measure a variety of described parameters. Comparison between scarred vocal folds and control vocal folds was made. At least 20% of the slides for each vocal fold were randomly selected (n=42) for repeat measurements of interrater and intrarater reliability. A statistically significant difference between scarred and control vocal folds was obtained for horizontal distance (P<0.001), vertical distance (P=0.005), area (P<0.001), mean optical density (OD) (P<0.001), and OD at defined points along the length of the vocal fold (P< or =0.009). Reliability calculations for intrarater and interrater measurements ranged from r=0.845 to r=0.994 and from r=0.734 to r=0.976, respectively. The proposed approach for geometrical measurements meets the intended objectives in a canine model of vocal fold scar. Future work is needed to apply this approach to other model systems.

  19. On precisely modelling surface deformation due to interacting magma chambers and dykes

    NASA Astrophysics Data System (ADS)

    Pascal, Karen; Neuberg, Jurgen; Rivalta, Eleonora

    2014-01-01

    Combined data sets of InSAR and GPS allow us to observe surface deformation in volcanic settings. However, at the vast majority of volcanoes, a detailed 3-D structure that could guide the modelling of deformation sources is not available, due to the lack of tomography studies, for example. Therefore, volcano ground deformation due to magma movement in the subsurface is commonly modelled using simple point (Mogi) or dislocation (Okada) sources, embedded in a homogeneous, isotropic and elastic half-space. When data sets are too complex to be explained by a single deformation source, the magmatic system is often represented by a combination of these sources and their displacements fields are simply summed. By doing so, the assumption of homogeneity in the half-space is violated and the resulting interaction between sources is neglected. We have quantified the errors of such a simplification and investigated the limits in which the combination of analytical sources is justified. We have calculated the vertical and horizontal displacements for analytical models with adjacent deformation sources and have tested them against the solutions of corresponding 3-D finite element models, which account for the interaction between sources. We have tested various double-source configurations with either two spherical sources representing magma chambers, or a magma chamber and an adjacent dyke, modelled by a rectangular tensile dislocation or pressurized crack. For a tensile Okada source (representing an opening dyke) aligned or superposed to a Mogi source (magma chamber), we find the discrepancies with the numerical models to be insignificant (<5 per cent) independently of the source separation. However, if a Mogi source is placed side by side to an Okada source (in the strike-perpendicular direction), we find the discrepancies to become significant for a source separation less than four times the radius of the magma chamber. For horizontally or vertically aligned pressurized

  20. Dislocation models of interseismic deformation in the western United States

    USGS Publications Warehouse

    Pollitz, F.F.; McCrory, P.; Svarc, J.; Murray, J.

    2008-01-01

    The GPS-derived crustal velocity field of the western United States is used to construct dislocation models in a viscoelastic medium of interseismic crustal deformation. The interseismic velocity field is constrained by 1052 GPS velocity vectors spanning the ???2500-km-long plate boundary zone adjacent to the San Andreas fault and Cascadia subduction zone and extending ???1000 km into the plate interior. The GPS data set is compiled from U.S. Geological Survey campaign data, Plate Boundary Observatory data, and the Western U.S. Cordillera velocity field of Bennett et al. (1999). In the context of viscoelastic cycle models of postearthquake deformation, the interseismic velocity field is modeled with a combination of earthquake sources on ???100 known faults plus broadly distributed sources. Models that best explain the observed interseismic velocity field include the contributions of viscoelastic relaxation from faulting near the major plate margins, viscoelastic relaxation from distributed faulting in the plate interior, as well as lateral variations in depth-averaged rigidity in the elastic lithosphere. Resulting rigidity variations are consistent with reduced effective elastic plate thickness in a zone a few tens of kilometers wide surrounding the San Andreas fault (SAF) system. Primary deformation characteristics are captured along the entire SAF system, Eastern California Shear Zone, Walker Lane, the Mendocino triple junction, the Cascadia margin, and the plate interior up to ???1000 km from the major plate boundaries.

  1. Geometrical modeling of optical phase difference for analyzing atmospheric turbulence

    NASA Astrophysics Data System (ADS)

    Yuksel, Demet; Yuksel, Heba

    2013-09-01

    Ways of calculating phase shifts between laser beams propagating through atmospheric turbulence can give us insight towards the understanding of spatial diversity in Free-Space Optical (FSO) links. We propose a new geometrical model to estimate phase shifts between rays as the laser beam propagates through a simulated turbulent media. Turbulence is simulated by filling the propagation path with spherical bubbles of varying sizes and refractive index discontinuities statistically distributed according to various models. The level of turbulence is increased by elongating the range and/or increasing the number of bubbles that the rays interact with along their path. For each statistical representation of the atmosphere, the trajectories of two parallel rays separated by a particular distance are analyzed and computed simultaneously using geometrical optics. The three-dimensional geometry of the spheres is taken into account in the propagation of the rays. The bubble model is used to calculate the correlation between the two rays as their separation distance changes. The total distance traveled by each ray as both rays travel to the target is computed. The difference in the path length traveled will yield the phase difference between the rays. The mean square phase difference is taken to be the phase structure function which in the literature, for a pair of collimated parallel pencil thin rays, obeys a five-third law assuming weak turbulence. All simulation results will be compared with the predictions of wave theory.

  2. Deformation data modeling through numerical models: an efficient method for tracking magma transport

    NASA Astrophysics Data System (ADS)

    Charco, M.; Gonzalez, P. J.; Galán del Sastre, P.

    2017-12-01

    Nowadays, multivariate collected data and robust physical models at volcano observatories are becoming crucial for providing effective volcano monitoring. Nevertheless, the forecast of volcanic eruption is notoriously difficult. Wthin this frame one of the most promising methods to evaluate the volcano hazard is the use of surface ground deformation and in the last decades many developments in the field of deformation modeling has been achieved. In particular, numerical modeling allows realistic media features such as topography and crustal heterogeneities to be included, although it is still very time cosuming to solve the inverse problem for near-real time interpretations. Here, we present a method that can be efficiently used to estimate the location and evolution of magmatic sources base on real-time surface deformation data and Finite Element (FE) models. Generally, the search for the best-fitting magmatic (point) source(s) is conducted for an array of 3-D locations extending below a predefined volume region and the Green functions for all the array components have to be precomputed. We propose a FE model for the pre-computation of Green functions in a mechanically heterogeneous domain which eventually will lead to a better description of the status of the volcanic area. The number of Green functions is reduced here to the number of observational points by using their reciprocity relationship. We present and test this methodology with an optimization method base on a Genetic Algorithm. Following synthetic and sensitivity test to estimate the uncertainty of the model parameters, we apply the tool for magma tracking during 2007 Kilauea volcano intrusion and eruption. We show how data inversion with numerical models can speed up the source parameters estimations for a given volcano showing signs of unrest.

  3. Haptic exploration of fingertip-sized geometric features using a multimodal tactile sensor

    NASA Astrophysics Data System (ADS)

    Ponce Wong, Ruben D.; Hellman, Randall B.; Santos, Veronica J.

    2014-06-01

    Haptic perception remains a grand challenge for artificial hands. Dexterous manipulators could be enhanced by "haptic intelligence" that enables identification of objects and their features via touch alone. Haptic perception of local shape would be useful when vision is obstructed or when proprioceptive feedback is inadequate, as observed in this study. In this work, a robot hand outfitted with a deformable, bladder-type, multimodal tactile sensor was used to replay four human-inspired haptic "exploratory procedures" on fingertip-sized geometric features. The geometric features varied by type (bump, pit), curvature (planar, conical, spherical), and footprint dimension (1.25 - 20 mm). Tactile signals generated by active fingertip motions were used to extract key parameters for use as inputs to supervised learning models. A support vector classifier estimated order of curvature while support vector regression models estimated footprint dimension once curvature had been estimated. A distal-proximal stroke (along the long axis of the finger) enabled estimation of order of curvature with an accuracy of 97%. Best-performing, curvature-specific, support vector regression models yielded R2 values of at least 0.95. While a radial-ulnar stroke (along the short axis of the finger) was most helpful for estimating feature type and size for planar features, a rolling motion was most helpful for conical and spherical features. The ability to haptically perceive local shape could be used to advance robot autonomy and provide haptic feedback to human teleoperators of devices ranging from bomb defusal robots to neuroprostheses.

  4. A finite element head and neck model as a supportive tool for deformable image registration.

    PubMed

    Kim, Jihun; Saitou, Kazuhiro; Matuszak, Martha M; Balter, James M

    2016-07-01

    A finite element (FE) head and neck model was developed as a tool to aid investigations and development of deformable image registration and patient modeling in radiation oncology. Useful aspects of a FE model for these purposes include ability to produce realistic deformations (similar to those seen in patients over the course of treatment) and a rational means of generating new configurations, e.g., via the application of force and/or displacement boundary conditions. The model was constructed based on a cone-beam computed tomography image of a head and neck cancer patient. The three-node triangular surface meshes created for the bony elements (skull, mandible, and cervical spine) and joint elements were integrated into a skeletal system and combined with the exterior surface. Nodes were additionally created inside the surface structures which were composed of the three-node triangular surface meshes, so that four-node tetrahedral FE elements were created over the whole region of the model. The bony elements were modeled as a homogeneous linear elastic material connected by intervertebral disks. The surrounding tissues were modeled as a homogeneous linear elastic material. Under force or displacement boundary conditions, FE analysis on the model calculates approximate solutions of the displacement vector field. A FE head and neck model was constructed that skull, mandible, and cervical vertebrae were mechanically connected by disks. The developed FE model is capable of generating realistic deformations that are strain-free for the bony elements and of creating new configurations of the skeletal system with the surrounding tissues reasonably deformed. The FE model can generate realistic deformations for skeletal elements. In addition, the model provides a way of evaluating the accuracy of image alignment methods by producing a ground truth deformation and correspondingly simulated images. The ability to combine force and displacement conditions provides

  5. Multi-object segmentation framework using deformable models for medical imaging analysis.

    PubMed

    Namías, Rafael; D'Amato, Juan Pablo; Del Fresno, Mariana; Vénere, Marcelo; Pirró, Nicola; Bellemare, Marc-Emmanuel

    2016-08-01

    Segmenting structures of interest in medical images is an important step in different tasks such as visualization, quantitative analysis, simulation, and image-guided surgery, among several other clinical applications. Numerous segmentation methods have been developed in the past three decades for extraction of anatomical or functional structures on medical imaging. Deformable models, which include the active contour models or snakes, are among the most popular methods for image segmentation combining several desirable features such as inherent connectivity and smoothness. Even though different approaches have been proposed and significant work has been dedicated to the improvement of such algorithms, there are still challenging research directions as the simultaneous extraction of multiple objects and the integration of individual techniques. This paper presents a novel open-source framework called deformable model array (DMA) for the segmentation of multiple and complex structures of interest in different imaging modalities. While most active contour algorithms can extract one region at a time, DMA allows integrating several deformable models to deal with multiple segmentation scenarios. Moreover, it is possible to consider any existing explicit deformable model formulation and even to incorporate new active contour methods, allowing to select a suitable combination in different conditions. The framework also introduces a control module that coordinates the cooperative evolution of the snakes and is able to solve interaction issues toward the segmentation goal. Thus, DMA can implement complex object and multi-object segmentations in both 2D and 3D using the contextual information derived from the model interaction. These are important features for several medical image analysis tasks in which different but related objects need to be simultaneously extracted. Experimental results on both computed tomography and magnetic resonance imaging show that the proposed

  6. Deformations of vector-scalar models

    NASA Astrophysics Data System (ADS)

    Barnich, Glenn; Boulanger, Nicolas; Henneaux, Marc; Julia, Bernard; Lekeu, Victor; Ranjbar, Arash

    2018-02-01

    Abelian vector fields non-minimally coupled to uncharged scalar fields arise in many contexts. We investigate here through algebraic methods their consistent deformations ("gaugings"), i.e., the deformations that preserve the number (but not necessarily the form or the algebra) of the gauge symmetries. Infinitesimal consistent deformations are given by the BRST cohomology classes at ghost number zero. We parametrize explicitly these classes in terms of various types of global symmetries and corresponding Noether currents through the characteristic cohomology related to antifields and equations of motion. The analysis applies to all ghost numbers and not just ghost number zero. We also provide a systematic discussion of the linear and quadratic constraints on these parameters that follow from higher-order consistency. Our work is relevant to the gaugings of extended supergravities.

  7. Modeling and Characterization of PMMA for High Strain-Rate and Finite Deformations (Postprint)

    DTIC Science & Technology

    2010-05-01

    List of parameters for the modified MuUiken- model for PMMA . Von Mises [MPa] ^AJ3 V 00 ^ Aa ^Afi CR ha hp Value 3386 1748 0.35 298 1979...AFRL-RW-EG-TP-2010-073 Modeling and Characterization of PMMA for High Strain-Rate and Finite Deformations (Postprint) Eric B. Herbold Jennifer L...SUBTITLE Modeling and Characterization of PMMA for High Strain-Rate and Finite Deformations (Postprint) 5a. CONTRACT NUMBER 5b. GRANT NUMBER

  8. Anatomically accurate individual face modeling.

    PubMed

    Zhang, Yu; Prakash, Edmond C; Sung, Eric

    2003-01-01

    This paper presents a new 3D face model of a specific person constructed from the anatomical perspective. By exploiting the laser range data, a 3D facial mesh precisely representing the skin geometry is reconstructed. Based on the geometric facial mesh, we develop a deformable multi-layer skin model. It takes into account the nonlinear stress-strain relationship and dynamically simulates the non-homogenous behavior of the real skin. The face model also incorporates a set of anatomically-motivated facial muscle actuators and underlying skull structure. Lagrangian mechanics governs the facial motion dynamics, dictating the dynamic deformation of facial skin in response to the muscle contraction.

  9. Hall viscosity and geometric response in the Chern-Simons matrix model of the Laughlin states

    NASA Astrophysics Data System (ADS)

    Lapa, Matthew F.; Hughes, Taylor L.

    2018-05-01

    We study geometric aspects of the Laughlin fractional quantum Hall (FQH) states using a description of these states in terms of a matrix quantum mechanics model known as the Chern-Simons matrix model (CSMM). This model was proposed by Polychronakos as a regularization of the noncommutative Chern-Simons theory description of the Laughlin states proposed earlier by Susskind. Both models can be understood as describing the electrons in a FQH state as forming a noncommutative fluid, i.e., a fluid occupying a noncommutative space. Here, we revisit the CSMM in light of recent work on geometric response in the FQH effect, with the goal of determining whether the CSMM captures this aspect of the physics of the Laughlin states. For this model, we compute the Hall viscosity, Hall conductance in a nonuniform electric field, and the Hall viscosity in the presence of anisotropy (or intrinsic geometry). Our calculations show that the CSMM captures the guiding center contribution to the known values of these quantities in the Laughlin states, but lacks the Landau orbit contribution. The interesting correlations in a Laughlin state are contained entirely in the guiding center part of the state/wave function, and so we conclude that the CSMM accurately describes the most important aspects of the physics of the Laughlin FQH states, including the Hall viscosity and other geometric properties of these states, which are of current interest.

  10. Study of optical techniques for the Ames unitary wind tunnels. Part 4: Model deformation

    NASA Technical Reports Server (NTRS)

    Lee, George

    1992-01-01

    A survey of systems capable of model deformation measurements was conducted. The survey included stereo-cameras, scanners, and digitizers. Moire, holographic, and heterodyne interferometry techniques were also looked at. Stereo-cameras with passive or active targets are currently being deployed for model deformation measurements at NASA Ames and LaRC, Boeing, and ONERA. Scanners and digitizers are widely used in robotics, motion analysis, medicine, etc., and some of the scanner and digitizers can meet the model deformation requirements. Commercial stereo-cameras, scanners, and digitizers are being improved in accuracy, reliability, and ease of operation. A number of new systems are coming onto the market.

  11. Using Remote Sensing Data to Constrain Models of Fault Interactions and Plate Boundary Deformation

    NASA Astrophysics Data System (ADS)

    Glasscoe, M. T.; Donnellan, A.; Lyzenga, G. A.; Parker, J. W.; Milliner, C. W. D.

    2016-12-01

    Determining the distribution of slip and behavior of fault interactions at plate boundaries is a complex problem. Field and remotely sensed data often lack the necessary coverage to fully resolve fault behavior. However, realistic physical models may be used to more accurately characterize the complex behavior of faults constrained with observed data, such as GPS, InSAR, and SfM. These results will improve the utility of using combined models and data to estimate earthquake potential and characterize plate boundary behavior. Plate boundary faults exhibit complex behavior, with partitioned slip and distributed deformation. To investigate what fraction of slip becomes distributed deformation off major faults, we examine a model fault embedded within a damage zone of reduced elastic rigidity that narrows with depth and forward model the slip and resulting surface deformation. The fault segments and slip distributions are modeled using the JPL GeoFEST software. GeoFEST (Geophysical Finite Element Simulation Tool) is a two- and three-dimensional finite element software package for modeling solid stress and strain in geophysical and other continuum domain applications [Lyzenga, et al., 2000; Glasscoe, et al., 2004; Parker, et al., 2008, 2010]. New methods to advance geohazards research using computer simulations and remotely sensed observations for model validation are required to understand fault slip, the complex nature of fault interaction and plate boundary deformation. These models help enhance our understanding of the underlying processes, such as transient deformation and fault creep, and can aid in developing observation strategies for sUAV, airborne, and upcoming satellite missions seeking to determine how faults behave and interact and assess their associated hazard. Models will also help to characterize this behavior, which will enable improvements in hazard estimation. Validating the model results against remotely sensed observations will allow us to better

  12. An Exposition on the Nonlinear Kinematics of Shells, Including Transverse Shearing Deformations

    NASA Technical Reports Server (NTRS)

    Nemeth, Michael P.

    2013-01-01

    An in-depth exposition on the nonlinear deformations of shells with "small" initial geometric imperfections, is presented without the use of tensors. First, the mathematical descriptions of an undeformed-shell reference surface, and its deformed image, are given in general nonorthogonal coordinates. The two-dimensional Green-Lagrange strains of the reference surface derived and simplified for the case of "small" strains. Linearized reference-surface strains, rotations, curvatures, and torsions are then derived and used to obtain the "small" Green-Lagrange strains in terms of linear deformation measures. Next, the geometry of the deformed shell is described mathematically and the "small" three-dimensional Green-Lagrange strains are given. The deformations of the shell and its reference surface are related by introducing a kinematic hypothesis that includes transverse shearing deformations and contains the classical Love-Kirchhoff kinematic hypothesis as a proper, explicit subset. Lastly, summaries of the essential equations are given for general nonorthogonal and orthogonal coordinates, and the basis for further simplification of the equations is discussed.

  13. Two-dimensional and three-dimensional evaluation of the deformation relief

    NASA Astrophysics Data System (ADS)

    Alfyorova, E. A.; Lychagin, D. V.

    2017-12-01

    This work presents the experimental results concerning the research of the morphology of the face-centered cubic single crystal surface after compression deformation. Our aim is to identify the method of forming a quasiperiodic profile of single crystals with different crystal geometrical orientation and quantitative description of deformation structures. A set of modern methods such as optical and confocal microscopy is applied to determine the morphology of surface parameters. The results show that octahedral slip is an integral part of the formation of the quasiperiodic profile surface starting with initial strain. The similarity of the formation process of the surface profile at different scale levels is given. The size of consistent deformation regions is found. This is 45 µm for slip lines ([001]-single crystal) and 30 µm for mesobands ([110]-single crystal). The possibility of using two- and three-dimensional roughness parameters to describe the deformation structures was shown.

  14. Geometric Modeling of Construction Communications with Specified Dynamic Properties

    NASA Astrophysics Data System (ADS)

    Korotkiy, V. A.; Usmanova, E. A.; Khmarova, L. I.

    2017-11-01

    Among many construction communications the pipelines designed for the organized supply or removal of liquid or loose working bodies are distinguished for their functional purpose. Such communications should have dynamic properties which allow one to reduce losses on friction and vortex formation. From the point of view of geometric modeling, the given dynamic properties of the projected communication mean the required degree of smoothness of its center line. To model the axial line (flat or spatial), it is proposed to use composite curve lines consisting of the curve arcs of the second order or from their quadratic images. The advantage of the proposed method is that the designer gets the model of a given curve not as a set of coordinates of its points but in the form of a matrix of coefficients of the canonical equations for each arc.

  15. Experimental Investigation of Aeroelastic Deformation of Slender Wings at Supersonic Speeds Using a Video Model Deformation Measurement Technique

    NASA Technical Reports Server (NTRS)

    Erickson, Gary E.

    2013-01-01

    A video-based photogrammetric model deformation system was established as a dedicated optical measurement technique at supersonic speeds in the NASA Langley Research Center Unitary Plan Wind Tunnel. This system was used to measure the wing twist due to aerodynamic loads of two supersonic commercial transport airplane models with identical outer mold lines but different aeroelastic properties. One model featured wings with deflectable leading- and trailing-edge flaps and internal channels to accommodate static pressure tube instrumentation. The wings of the second model were of single-piece construction without flaps or internal channels. The testing was performed at Mach numbers from 1.6 to 2.7, unit Reynolds numbers of 1.0 million to 5.0 million, and angles of attack from -4 degrees to +10 degrees. The video model deformation system quantified the wing aeroelastic response to changes in the Mach number, Reynolds number concurrent with dynamic pressure, and angle of attack and effectively captured the differences in the wing twist characteristics between the two test articles.

  16. Virtual Deformation Control of the X-56A Model with Simulated Fiber Optic Sensors

    NASA Technical Reports Server (NTRS)

    Suh, Peter M.; Chin, Alexander W.; Mavris, Dimitri N.

    2014-01-01

    A robust control law design methodology is presented to stabilize the X-56A model and command its wing shape. The X-56A was purposely designed to experience flutter modes in its flight envelope. The methodology introduces three phases: the controller design phase, the modal filter design phase, and the reference signal design phase. A mu-optimal controller is designed and made robust to speed and parameter variations. A conversion technique is presented for generating sensor strain modes from sensor deformation mode shapes. The sensor modes are utilized for modal filtering and simulating fiber optic sensors for feedback to the controller. To generate appropriate virtual deformation reference signals, rigid-body corrections are introduced to the deformation mode shapes. After successful completion of the phases, virtual deformation control is demonstrated. The wing is deformed and it is shown that angle-ofattack changes occur which could potentially be used to an advantage. The X-56A program must demonstrate active flutter suppression. It is shown that the virtual deformation controller can achieve active flutter suppression on the X-56A simulation model.

  17. Virtual Deformation Control of the X-56A Model with Simulated Fiber Optic Sensors

    NASA Technical Reports Server (NTRS)

    Suh, Peter M.; Chin, Alexander Wong

    2013-01-01

    A robust control law design methodology is presented to stabilize the X-56A model and command its wing shape. The X-56A was purposely designed to experience flutter modes in its flight envelope. The methodology introduces three phases: the controller design phase, the modal filter design phase, and the reference signal design phase. A mu-optimal controller is designed and made robust to speed and parameter variations. A conversion technique is presented for generating sensor strain modes from sensor deformation mode shapes. The sensor modes are utilized for modal filtering and simulating fiber optic sensors for feedback to the controller. To generate appropriate virtual deformation reference signals, rigid-body corrections are introduced to the deformation mode shapes. After successful completion of the phases, virtual deformation control is demonstrated. The wing is deformed and it is shown that angle-of-attack changes occur which could potentially be used to an advantage. The X-56A program must demonstrate active flutter suppression. It is shown that the virtual deformation controller can achieve active flutter suppression on the X-56A simulation model.

  18. Multiscale deformation of a liquid surface in interaction with a nanoprobe

    NASA Astrophysics Data System (ADS)

    Ledesma-Alonso, R.; Tordjeman, P.; Legendre, D.

    2012-06-01

    The interaction between a nanoprobe and a liquid surface is studied. The surface deformation depends on physical and geometric parameters, which are depicted by employing three dimensionless parameters: Bond number Bo, modified Hamaker number Ha, and dimensionless separation distance D*. The evolution of the deformation is described by a strongly nonlinear partial differential equation, which is solved by means of numerical methods. The dynamic analysis of the liquid profile points out the existence of a critical distance Dmin*, below which the irreversible wetting process of the nanoprobe happens. For D*≥Dmin*, the numerical results show the existence of two deformation profiles, one stable and another unstable from the energetic point of view. Different deformation length-scales, characterizing the stable liquid equilibrium interface, define the near- and the far-field deformation zones, where self-similar profiles are found. Finally, our results allow us to provide simple relationships between the parameters, which leads to determine the optimal conditions when performing atomic force microscope measurements over liquids.

  19. Geometric model of topological insulators from the Maxwell algebra

    NASA Astrophysics Data System (ADS)

    Palumbo, Giandomenico

    2017-11-01

    We propose a novel geometric model of time-reversal-invariant topological insulators in three dimensions in presence of an external electromagnetic field. Their gapped boundary supports relativistic quantum Hall states and is described by a Chern-Simons theory, where the gauge connection takes values in the Maxwell algebra. This represents a non-central extension of the Poincaré algebra and takes into account both the Lorentz and magnetic-translation symmetries of the surface states. In this way, we derive a relativistic version of the Wen-Zee term and we show that the non-minimal coupling between the background geometry and the electromagnetic field in the model is in agreement with the main properties of the relativistic quantum Hall states in the flat space.

  20. Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences

    PubMed Central

    Bucksch, Alexander; Atta-Boateng, Acheampong; Azihou, Akomian F.; Battogtokh, Dorjsuren; Baumgartner, Aly; Binder, Brad M.; Braybrook, Siobhan A.; Chang, Cynthia; Coneva, Viktoirya; DeWitt, Thomas J.; Fletcher, Alexander G.; Gehan, Malia A.; Diaz-Martinez, Diego Hernan; Hong, Lilan; Iyer-Pascuzzi, Anjali S.; Klein, Laura L.; Leiboff, Samuel; Li, Mao; Lynch, Jonathan P.; Maizel, Alexis; Maloof, Julin N.; Markelz, R. J. Cody; Martinez, Ciera C.; Miller, Laura A.; Mio, Washington; Palubicki, Wojtek; Poorter, Hendrik; Pradal, Christophe; Price, Charles A.; Puttonen, Eetu; Reese, John B.; Rellán-Álvarez, Rubén; Spalding, Edgar P.; Sparks, Erin E.; Topp, Christopher N.; Williams, Joseph H.; Chitwood, Daniel H.

    2017-01-01

    The geometries and topologies of leaves, flowers, roots, shoots, and their arrangements have fascinated plant biologists and mathematicians alike. As such, plant morphology is inherently mathematical in that it describes plant form and architecture with geometrical and topological techniques. Gaining an understanding of how to modify plant morphology, through molecular biology and breeding, aided by a mathematical perspective, is critical to improving agriculture, and the monitoring of ecosystems is vital to modeling a future with fewer natural resources. In this white paper, we begin with an overview in quantifying the form of plants and mathematical models of patterning in plants. We then explore the fundamental challenges that remain unanswered concerning plant morphology, from the barriers preventing the prediction of phenotype from genotype to modeling the movement of leaves in air streams. We end with a discussion concerning the education of plant morphology synthesizing biological and mathematical approaches and ways to facilitate research advances through outreach, cross-disciplinary training, and open science. Unleashing the potential of geometric and topological approaches in the plant sciences promises to transform our understanding of both plants and mathematics. PMID:28659934

  1. The relationship between wave and geometrical optics models of coded aperture type x-ray phase contrast imaging systems.

    PubMed

    Munro, Peter R T; Ignatyev, Konstantin; Speller, Robert D; Olivo, Alessandro

    2010-03-01

    X-ray phase contrast imaging is a very promising technique which may lead to significant advancements in medical imaging. One of the impediments to the clinical implementation of the technique is the general requirement to have an x-ray source of high coherence. The radiation physics group at UCL is currently developing an x-ray phase contrast imaging technique which works with laboratory x-ray sources. Validation of the system requires extensive modelling of relatively large samples of tissue. To aid this, we have undertaken a study of when geometrical optics may be employed to model the system in order to avoid the need to perform a computationally expensive wave optics calculation. In this paper, we derive the relationship between the geometrical and wave optics model for our system imaging an infinite cylinder. From this model we are able to draw conclusions regarding the general applicability of the geometrical optics approximation.

  2. Influence of the Geometric Parameters on the Mechanical Behaviour of Fabric Reinforced Composite Laminates

    NASA Astrophysics Data System (ADS)

    Axinte, Andrei; Taranu, Nicolae; Bejan, Liliana

    2016-10-01

    A polymer fabric reinforced composite is a high performance material, which combines strength of the fibres with the flexibility and ductility of the matrix. For a better drapeability, the tows of fibres are interleaved, resulting the woven fabric, used as reinforcement. The complex geometric shape of the fabric is of paramount importance in establishing the deformability of the textile reinforced composite laminates. In this paper, an approach based on Classical Lamination Theory ( CLT), combined with Finite Element Methods ( FEM), using Failure Analysis and Internal Load Redistribution, is utilised, in order to compare the behaviour of the material under specific loads. The main goal is to analyse the deformability of certain types of textile reinforced composite laminates, using carbon fibre satin as reinforcement and epoxy resin as matrix. This is accomplished by studying the variation of the in-plane strains, given the fluctuation of several geometric parameters, namely the width of the reinforcing tow, the gap between two consecutive tows, the angle of laminae in a multi-layered configuration and the tows fibre volume fraction.

  3. 3D deformable organ model based liver motion tracking in ultrasound videos

    NASA Astrophysics Data System (ADS)

    Kim, Jung-Bae; Hwang, Youngkyoo; Oh, Young-Taek; Bang, Won-Chul; Lee, Heesae; Kim, James D. K.; Kim, Chang Yeong

    2013-03-01

    This paper presents a novel method of using 2D ultrasound (US) cine images during image-guided therapy to accurately track the 3D position of a tumor even when the organ of interest is in motion due to patient respiration. Tracking is possible thanks to a 3D deformable organ model we have developed. The method consists of three processes in succession. The first process is organ modeling where we generate a personalized 3D organ model from high quality 3D CT or MR data sets captured during three different respiratory phases. The model includes the organ surface, vessel and tumor, which can all deform and move in accord with patient respiration. The second process is registration of the organ model to 3D US images. From 133 respiratory phase candidates generated from the deformable organ model, we resolve the candidate that best matches the 3D US images according to vessel centerline and surface. As a result, we can determine the position of the US probe. The final process is real-time tracking using 2D US cine images captured by the US probe. We determine the respiratory phase by tracking the diaphragm on the image. The 3D model is then deformed according to respiration phase and is fitted to the image by considering the positions of the vessels. The tumor's 3D positions are then inferred based on respiration phase. Testing our method on real patient data, we have found the accuracy of 3D position is within 3.79mm and processing time is 5.4ms during tracking.

  4. Vibration isolation using extreme geometric nonlinearity

    NASA Astrophysics Data System (ADS)

    Virgin, L. N.; Santillan, S. T.; Plaut, R. H.

    2008-08-01

    A highly deformed, slender beam (or strip), attached to a vertically oscillating base, is used in a vibration isolation application to reduce the motion of a supported mass. The isolator is a thin strip that is bent so that the two ends are clamped together, forming a loop. The clamped ends are attached to an excitation source and the supported system is attached at the loop midpoint directly above the base. The strip is modeled as an elastica, and the resulting nonlinear boundary value problem is solved numerically using a shooting method. First the equilibrium shapes of the loop with varying static loads and lengths are studied. The analysis reveals a large degree of stiffness tunability; the stiffness is dependent on the geometric configuration, which itself is determined by the supported mass, loop length, and loop self-weight. Free vibration frequencies and mode shapes are also found. Finally, the case of forced vibration is studied, and the displacement transmissibility over a large range of forcing frequencies is determined for varying parameter values. Experiments using polycarbonate strips are conducted to verify equilibrium and dynamic behavior.

  5. WE-G-BRF-01: Adaptation to Intrafraction Tumor Deformation During Intensity-Modulated Radiotherapy: First Proof-Of-Principle Demonstration

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ge, Y; OBrien, R; Shieh, C

    2014-06-15

    Purpose: Intrafraction tumor deformation limits targeting accuracy in radiotherapy and cannot be adapted to by current motion management techniques. This study simulated intrafractional treatment adaptation to tumor deformations using a dynamic Multi-Leaf Collimator (DMLC) tracking system during Intensity-modulated radiation therapy (IMRT) treatment for the first time. Methods: The DMLC tracking system was developed to adapt to the intrafraction tumor deformation by warping the planned beam aperture guided by the calculated deformation vector field (DVF) obtained from deformable image registration (DIR) at the time of treatment delivery. Seven single phantom deformation images up to 10.4 mm deformation and eight tumor systemmore » phantom deformation images up to 21.5 mm deformation were acquired and used in tracking simulation. The intrafraction adaptation was simulated at the DMLC tracking software platform, which was able to communicate with the image registration software, reshape the instantaneous IMRT field aperture and log the delivered MLC fields.The deformation adaptation accuracy was evaluated by a geometric target coverage metric defined as the sum of the area incorrectly outside and inside the reference aperture. The incremental deformations were arbitrarily determined to take place equally over the delivery interval. The geometric target coverage of delivery with deformation adaptation was compared against the delivery without adaptation. Results: Intrafraction deformation adaptation during dynamic IMRT plan delivery was simulated for single and system deformable phantoms. For the two particular delivery situations, over the treatment course, deformation adaptation improved the target coverage by 89% for single target deformation and 79% for tumor system deformation compared with no-tracking delivery. Conclusion: This work demonstrated the principle of real-time tumor deformation tracking using a DMLC. This is the first step towards the development

  6. Aeroelastic Deformation Measurements of Flap, Gap, and Overhang on a Semispan Model

    NASA Technical Reports Server (NTRS)

    Burner, A. W.; Liu, Tianshu; Garg, Sanjay; Ghee, Terence A.; Taylor, Nigel J.

    2000-01-01

    Single-camera, single-view videogrammetry has been used to determine static aeroelastic deformation of a slotted flap configuration on a semispan model at the National Transonic Facility (NTF). Deformation was determined by comparing wind-off to wind-on spatial data from targets placed on the main element, shroud, and flap of the model. Digitized video images from a camera were recorded and processed to automatically determine target image plane locations that were then corrected for sensor, lens, and frame grabber spatial errors. The videogrammetric technique has been established at NASA facilities as the technique of choice when high-volume static aeroelastic data with minimum impact on data taking is required. The primary measurement at the NTF with this technique in the past has been the measurement of static aeroelastic wing twist on full span models. The first results using the videogrammetric technique for the measurement of component deformation during semispan testing at the NTF are presented.

  7. Parity Deformed Jaynes-Cummings Model: “Robust Maximally Entangled States”

    PubMed Central

    Dehghani, A.; Mojaveri, B.; Shirin, S.; Faseghandis, S. Amiri

    2016-01-01

    The parity-deformations of the quantum harmonic oscillator are used to describe the generalized Jaynes-Cummings model based on the λ-analog of the Heisenberg algebra. The behavior is interestingly that of a coupled system comprising a two-level atom and a cavity field assisted by a continuous external classical field. The dynamical characters of the system is explored under the influence of the external field. In particular, we analytically study the generation of robust and maximally entangled states formed by a two-level atom trapped in a lossy cavity interacting with an external centrifugal field. We investigate the influence of deformation and detuning parameters on the degree of the quantum entanglement and the atomic population inversion. Under the condition of a linear interaction controlled by an external field, the maximally entangled states may emerge periodically along with time evolution. In the dissipation regime, the entanglement of the parity deformed JCM are preserved more with the increase of the deformation parameter, i.e. the stronger external field induces better degree of entanglement. PMID:27917882

  8. Modelling of deformation and recrystallisation microstructures in rocks and ice

    NASA Astrophysics Data System (ADS)

    Bons, Paul D.; Evans, Lynn A.; Gomez-Rivas, Enrique; Griera, Albert; Jessell, Mark W.; Lebensohn, Ricardo; Llorens, Maria-Gema; Peternell, Mark; Piazolo, Sandra; Weikusat, Ilka; Wilson, Chris J. L.

    2015-04-01

    Microstructures both record the deformation history of a rock and strongly control its mechanical properties. As microstructures in natural rocks only show the final "post-mortem" state, geologists have attempted to simulate the development of microstructures with experiments and later numerical models. Especially in-situ experiments have given enormous insight, as time-lapse movies could reveal the full history of a microstructure. Numerical modelling is an alternative approach to simulate and follow the change in microstructure with time, unconstrained by experimental limitations. Numerical models have been applied to a range of microstructural processes, such as grain growth, dynamic recrystallisation, porphyroblast rotation, vein growth, formation of mylonitic fabrics, etc. The numerical platform "Elle" (www.elle.ws) in particular has brought progress in the simulation of microstructural development as it is specifically designed to include the competition between simultaneously operating processes. Three developments significantly improve our capability to simulate microstructural evolution: (1) model input from the mapping of crystallographic orientation with EBSD or the automatic fabric analyser, (2) measurement of grain size and crystallographic preferred orientation evolution using neutron diffraction experiments and (3) the implementation of the full-field Fast Fourier Transform (FFT) solver for modelling anisotropic crystal-plastic deformation. The latter enables the detailed modelling of stress and strain as a function of local crystallographic orientation, which has a strong effect on strain localisation such as, for example, the formation of shear bands. These models can now be compared with the temporal evolution of crystallographic orientation distributions in in-situ experiments. In the last decade, the possibility to combine experiments with numerical simulations has allowed not only verification and refinement of the numerical simulation

  9. Stock price prediction using geometric Brownian motion

    NASA Astrophysics Data System (ADS)

    Farida Agustini, W.; Restu Affianti, Ika; Putri, Endah RM

    2018-03-01

    Geometric Brownian motion is a mathematical model for predicting the future price of stock. The phase that done before stock price prediction is determine stock expected price formulation and determine the confidence level of 95%. On stock price prediction using geometric Brownian Motion model, the algorithm starts from calculating the value of return, followed by estimating value of volatility and drift, obtain the stock price forecast, calculating the forecast MAPE, calculating the stock expected price and calculating the confidence level of 95%. Based on the research, the output analysis shows that geometric Brownian motion model is the prediction technique with high rate of accuracy. It is proven with forecast MAPE value ≤ 20%.

  10. Deformable torso phantoms of Chinese adults for personalized anatomy modelling.

    PubMed

    Wang, Hongkai; Sun, Xiaobang; Wu, Tongning; Li, Congsheng; Chen, Zhonghua; Liao, Meiying; Li, Mengci; Yan, Wen; Huang, Hui; Yang, Jia; Tan, Ziyu; Hui, Libo; Liu, Yue; Pan, Hang; Qu, Yue; Chen, Zhaofeng; Tan, Liwen; Yu, Lijuan; Shi, Hongcheng; Huo, Li; Zhang, Yanjun; Tang, Xin; Zhang, Shaoxiang; Liu, Changjian

    2018-04-16

    In recent years, there has been increasing demand for personalized anatomy modelling for medical and industrial applications, such as ergonomics device development, clinical radiological exposure simulation, biomechanics analysis, and 3D animation character design. In this study, we constructed deformable torso phantoms that can be deformed to match the personal anatomy of Chinese male and female adults. The phantoms were created based on a training set of 79 trunk computed tomography (CT) images (41 males and 38 females) from normal Chinese subjects. Major torso organs were segmented from the CT images, and the statistical shape model (SSM) approach was used to learn the inter-subject anatomical variations. To match the personal anatomy, the phantoms were registered to individual body surface scans or medical images using the active shape model method. The constructed SSM demonstrated anatomical variations in body height, fat quantity, respiratory status, organ geometry, male muscle size, and female breast size. The masses of the deformed phantom organs were consistent with Chinese population organ mass ranges. To validate the performance of personal anatomy modelling, the phantoms were registered to the body surface scan and CT images. The registration accuracy measured from 22 test CT images showed a median Dice coefficient over 0.85, a median volume recovery coefficient (RC vlm ) between 0.85 and 1.1, and a median averaged surface distance (ASD) < 1.5 mm. We hope these phantoms can serve as computational tools for personalized anatomy modelling for the research community. © 2018 Anatomical Society.

  11. SU-F-J-138: An Extension of PCA-Based Respiratory Deformation Modeling Via Multi-Linear Decomposition

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Iliopoulos, AS; Sun, X; Pitsianis, N

    Purpose: To address and lift the limited degree of freedom (DoF) of globally bilinear motion components such as those based on principal components analysis (PCA), for encoding and modeling volumetric deformation motion. Methods: We provide a systematic approach to obtaining a multi-linear decomposition (MLD) and associated motion model from deformation vector field (DVF) data. We had previously introduced MLD for capturing multi-way relationships between DVF variables, without being restricted by the bilinear component format of PCA-based models. PCA-based modeling is commonly used for encoding patient-specific deformation as per planning 4D-CT images, and aiding on-board motion estimation during radiotherapy. However, themore » bilinear space-time decomposition inherently limits the DoF of such models by the small number of respiratory phases. While this limit is not reached in model studies using analytical or digital phantoms with low-rank motion, it compromises modeling power in the presence of relative motion, asymmetries and hysteresis, etc, which are often observed in patient data. Specifically, a low-DoF model will spuriously couple incoherent motion components, compromising its adaptability to on-board deformation changes. By the multi-linear format of extracted motion components, MLD-based models can encode higher-DoF deformation structure. Results: We conduct mathematical and experimental comparisons between PCA- and MLD-based models. A set of temporally-sampled analytical trajectories provides a synthetic, high-rank DVF; trajectories correspond to respiratory and cardiac motion factors, including different relative frequencies and spatial variations. Additionally, a digital XCAT phantom is used to simulate a lung lesion deforming incoherently with respect to the body, which adheres to a simple respiratory trend. In both cases, coupling of incoherent motion components due to a low model DoF is clearly demonstrated. Conclusion: Multi

  12. Modeling knee joint endoprosthesis mode of deformation

    NASA Astrophysics Data System (ADS)

    Skeeba, V. Yu; Ivancivsky, V. V.

    2018-03-01

    The purpose of the work was to define the efficient design of the endoprosthesis, working in a multiple-cycle loading environment. Methodology and methods: triangulated surfaces of the base contact surfaces of endoprosthesis butt elements have been created using the PowerShape and SolidWorks software functional environment, and the assemblies of the possible combinations of the knee joint prosthetic designs have been prepared. The mode of deformation modeling took place in the multipurpose program complex ANSYS. Results and discussion: as a result of the numerical modeling, the following data were obtained for each of the developed knee joint versions: the distribution fields of absolute (total) and relative deformations; equivalent stress distribution fields; fatigue strength coefficient distribution fields. In the course of the studies, the following efficient design assembly has been established: 1) Ti-Al-V alloy composite femoral component with polymer inserts; 2) ceramic liners of the compound separator; 3) a Ti-Al-V alloy composite tibial component. The fatigue strength coefficient for the femoral component is 4.2; for the femoral component polymer inserts is 1.2; for the ceramic liners of the compound separator is 3.1; for the tibial component is 2.7. This promising endoprosthesis structure is recommended for further design and technological development.

  13. Extension of continental lithosphere - A model for two scales of basin and range deformation

    NASA Technical Reports Server (NTRS)

    Zuber, M. T.; Parmentier, E. M.; Fletcher, R. C.

    1986-01-01

    The development of a model for deformation in an extending continental lithosphere that is stratified in density and strength is described. The lithosphere model demonstrates that the necking instabilities at two wavelengths originate due to a strong upper crust, a mantle layer, and a weak lower crust. It is observed that the dominant wavelengths of necking are controlled by layer thickness and the strength of the layers control the amplitude of the instabilities. The model is applied to the Basin and Range Province of the western U.S. where deformations in ranges and tile domains are detected. The relation between the Bouguer gravity anomaly and the deformations is studied. The data reveal that the horizontal scale of short wavelength necking correlates with the spacings of individual basins and ranges, and the longer wavelength corresponds to the width of tilt domains. The control of the Basin and Range deformation by two scales of extensional instability is proposed.

  14. Manipulating the Geometric Computer-aided Design of the Operational Requirements-based Casualty Assessment Model within BRL-CAD

    DTIC Science & Technology

    2018-03-30

    ARL-TR-8336 ● MAR 2018 US Army Research Laboratory Manipulating the Geometric Computer-aided Design of the Operational...so designated by other authorized documents. Citation of manufacturer’s or trade names does not constitute an official endorsement or approval of...Army Research Laboratory Manipulating the Geometric Computer-aided Design of the Operational Requirements-based Casualty Assessment Model within

  15. Finite-deformation phase-field chemomechanics for multiphase, multicomponent solids

    NASA Astrophysics Data System (ADS)

    Svendsen, Bob; Shanthraj, Pratheek; Raabe, Dierk

    2018-03-01

    The purpose of this work is the development of a framework for the formulation of geometrically non-linear inelastic chemomechanical models for a mixture of multiple chemical components diffusing among multiple transforming solid phases. The focus here is on general model formulation. No specific model or application is pursued in this work. To this end, basic balance and constitutive relations from non-equilibrium thermodynamics and continuum mixture theory are combined with a phase-field-based description of multicomponent solid phases and their interfaces. Solid phase modeling is based in particular on a chemomechanical free energy and stress relaxation via the evolution of phase-specific concentration fields, order-parameter fields (e.g., related to chemical ordering, structural ordering, or defects), and local internal variables. At the mixture level, differences or contrasts in phase composition and phase local deformation in phase interface regions are treated as mixture internal variables. In this context, various phase interface models are considered. In the equilibrium limit, phase contrasts in composition and local deformation in the phase interface region are determined via bulk energy minimization. On the chemical side, the equilibrium limit of the current model formulation reduces to a multicomponent, multiphase, generalization of existing two-phase binary alloy interface equilibrium conditions (e.g., KKS). On the mechanical side, the equilibrium limit of one interface model considered represents a multiphase generalization of Reuss-Sachs conditions from mechanical homogenization theory. Analogously, other interface models considered represent generalizations of interface equilibrium conditions consistent with laminate and sharp-interface theory. In the last part of the work, selected existing models are formulated within the current framework as special cases and discussed in detail.

  16. Elementary model of severe plastic deformation by KoBo process

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gusak, A.; Storozhuk, N.; Danielewski, M., E-mail: daniel@agh.edu.pl

    2014-01-21

    Self-consistent model of generation, interaction, and annihilation of point defects in the gradient of oscillating stresses is presented. This model describes the recently suggested method of severe plastic deformation by combination of pressure and oscillating rotations of the die along the billet axis (KoBo process). Model provides the existence of distinct zone of reduced viscosity with sharply increased concentration of point defects. This zone provides the high extrusion velocity. Presented model confirms that the Severe Plastic Deformation (SPD) in KoBo may be treated as non-equilibrium phase transition of abrupt drop of viscosity in rather well defined spatial zone. In thismore » very zone, an intensive lateral rotational movement proceeds together with generation of point defects which in self-organized manner make rotation possible by the decrease of viscosity. The special properties of material under KoBo version of SPD can be described without using the concepts of nonequilibrium grain boundaries, ballistic jumps and amorphization. The model can be extended to include different SPD processes.« less

  17. The relationship between wave and geometrical optics models of coded aperture type x-ray phase contrast imaging systems

    PubMed Central

    Munro, Peter R.T.; Ignatyev, Konstantin; Speller, Robert D.; Olivo, Alessandro

    2013-01-01

    X-ray phase contrast imaging is a very promising technique which may lead to significant advancements in medical imaging. One of the impediments to the clinical implementation of the technique is the general requirement to have an x-ray source of high coherence. The radiation physics group at UCL is currently developing an x-ray phase contrast imaging technique which works with laboratory x-ray sources. Validation of the system requires extensive modelling of relatively large samples of tissue. To aid this, we have undertaken a study of when geometrical optics may be employed to model the system in order to avoid the need to perform a computationally expensive wave optics calculation. In this paper, we derive the relationship between the geometrical and wave optics model for our system imaging an infinite cylinder. From this model we are able to draw conclusions regarding the general applicability of the geometrical optics approximation. PMID:20389424

  18. Multicomponent model of deformation and detachment of a biofilm under fluid flow

    PubMed Central

    Tierra, Giordano; Pavissich, Juan P.; Nerenberg, Robert; Xu, Zhiliang; Alber, Mark S.

    2015-01-01

    A novel biofilm model is described which systemically couples bacteria, extracellular polymeric substances (EPS) and solvent phases in biofilm. This enables the study of contributions of rheology of individual phases to deformation of biofilm in response to fluid flow as well as interactions between different phases. The model, which is based on first and second laws of thermodynamics, is derived using an energetic variational approach and phase-field method. Phase-field coupling is used to model structural changes of a biofilm. A newly developed unconditionally energy-stable numerical splitting scheme is implemented for computing the numerical solution of the model efficiently. Model simulations predict biofilm cohesive failure for the flow velocity between and m s−1 which is consistent with experiments. Simulations predict biofilm deformation resulting in the formation of streamers for EPS exhibiting a viscous-dominated mechanical response and the viscosity of EPS being less than . Higher EPS viscosity provides biofilm with greater resistance to deformation and to removal by the flow. Moreover, simulations show that higher EPS elasticity yields the formation of streamers with complex geometries that are more prone to detachment. These model predictions are shown to be in qualitative agreement with experimental observations. PMID:25808342

  19. Modeling cotton (Gossypium spp) leaves and canopy using computer aided geometric design (CAGD)

    USDA-ARS?s Scientific Manuscript database

    The goal of this research is to develop a geometrically accurate model of cotton crop canopies for exploring changes in canopy microenvironment and physiological function with leaf structure. We develop an accurate representation of the leaves, including changes in three-dimensional folding and orie...

  20. Encoding geometric and non-geometric information: a study with evolved agents.

    PubMed

    Ponticorvo, Michela; Miglino, Orazio

    2010-01-01

    Vertebrate species use geometric information and non-geometric or featural cues to orient. Under some circumstances, when both geometric and non-geometric information are available, the geometric information overwhelms non-geometric cues (geometric primacy). In other cases, we observe the inverse tendency or the successful integration of both cues. In past years, modular explanations have been proposed for the geometric primacy: geometric and non-geometric information are processed separately, with the geometry module playing a dominant role. The modularity issue is related to the recent debate on the encoding of geometric information: is it innate or does it depend on environmental experience? In order to get insight into the mechanisms that cause the wide variety of behaviors observed in nature, we used Artificial Life experiments. We demonstrated that agents trained mainly with a single class of information oriented efficiently when they were exposed to one class of information (geometric or non-geometric). When they were tested in environments that contained both classes of information, they displayed a primacy for the information that they had experienced more during their training phase. Encoding and processing geometric and non-geometric information was run in a single cognitive neuro-representation. These findings represent a theoretical proof that the exposure frequency to different spatial information during a learning/adaptive history could produce agents with no modular neuro-cognitive systems that are able to process different types of spatial information and display various orientation behaviors (geometric primacy, non-geometric primacy, no primacy at all).

  1. Nonlinearity and Strain-Rate Dependence in the Deformation Response of Polymer Matrix Composites Modeled

    NASA Technical Reports Server (NTRS)

    Goldberg, Robert K.

    2000-01-01

    There has been no accurate procedure for modeling the high-speed impact of composite materials, but such an analytical capability will be required in designing reliable lightweight engine-containment systems. The majority of the models in use assume a linear elastic material response that does not vary with strain rate. However, for containment systems, polymer matrix composites incorporating ductile polymers are likely to be used. For such a material, the deformation response is likely to be nonlinear and to vary with strain rate. An analytical model has been developed at the NASA Glenn Research Center at Lewis Field that incorporates both of these features. A set of constitutive equations that was originally developed to analyze the viscoplastic deformation of metals (Ramaswamy-Stouffer equations) was modified to simulate the nonlinear, rate-dependent deformation of polymers. Specifically, the effects of hydrostatic stresses on the inelastic response, which can be significant in polymers, were accounted for by a modification of the definition of the effective stress. The constitutive equations were then incorporated into a composite micromechanics model based on the mechanics of materials theory. This theory predicts the deformation response of a composite material from the properties and behavior of the individual constituents. In this manner, the nonlinear, rate-dependent deformation response of a polymer matrix composite can be predicted.

  2. Soft phononic crystals with deformation-independent band gaps

    PubMed Central

    2017-01-01

    Soft phononic crystals have the advantages over their stiff counterparts of being flexible and reconfigurable. Normally, the band gaps of soft phononic crystals will be modified after deformation due to both geometric and constitutive nonlinearity. Indeed these are important properties that can be exploited to tune the dynamic properties of the material. However, in some instances, it may be that one wishes to deform the medium while retaining the band gap structure. A special class of soft phononic crystals is described here with band gaps that are independent or almost-independent of the imposed mechanical deformation, which enables the design of phononic crystals with robust performance. This remarkable behaviour originates from transformation elasticity theory, which leaves the wave equation and the eigenfrequencies invariant after deformation. The necessary condition to achieve such a property is that the Lagrangian elasticity tensor of the hyperelastic material should be constant, i.e. independent of deformation. It is demonstrated that incompressible neo-Hookean materials exhibit such a unique property. Semilinear materials also possess this property under special loading conditions. Phononic crystals composed of these two materials are studied theoretically and the predictions of invariance, or the manner in which the response deviates from invariance, are confirmed via numerical simulation. PMID:28484331

  3. Geometric decomposition of the conformation tensor in viscoelastic turbulence

    NASA Astrophysics Data System (ADS)

    Hameduddin, Ismail; Meneveau, Charles; Zaki, Tamer A.; Gayme, Dennice F.

    2018-05-01

    This work introduces a mathematical approach to analysing the polymer dynamics in turbulent viscoelastic flows that uses a new geometric decomposition of the conformation tensor, along with associated scalar measures of the polymer fluctuations. The approach circumvents an inherent difficulty in traditional Reynolds decompositions of the conformation tensor: the fluctuating tensor fields are not positive-definite and so do not retain the physical meaning of the tensor. The geometric decomposition of the conformation tensor yields both mean and fluctuating tensor fields that are positive-definite. The fluctuating tensor in the present decomposition has a clear physical interpretation as a polymer deformation relative to the mean configuration. Scalar measures of this fluctuating conformation tensor are developed based on the non-Euclidean geometry of the set of positive-definite tensors. Drag-reduced viscoelastic turbulent channel flow is then used an example case study. The conformation tensor field, obtained using direct numerical simulations, is analysed using the proposed framework.

  4. A micro-macro constitutive model for finite-deformation viscoelasticity of elastomers with nonlinear viscosity

    NASA Astrophysics Data System (ADS)

    Zhou, Jianyou; Jiang, Liying; Khayat, Roger E.

    2018-01-01

    Elastomers are known to exhibit viscoelastic behavior under deformation, which is linked to the diffusion processes of the highly mobile and flexible polymer chains. Inspired by the theories of polymer dynamics, a micro-macro constitutive model is developed to study the viscoelastic behaviors and the relaxation process of elastomeric materials under large deformation, in which the material parameters all have a microscopic foundation or a microstructural justification. The proposed model incorporates the nonlinear material viscosity into the continuum finite-deformation viscoelasticity theories which represent the polymer networks of elastomers with an elastic ground network and a few viscous subnetworks. The developed modeling framework is capable of adopting most of strain energy density functions for hyperelastic materials and thermodynamics evolution laws of viscoelastic solids. The modeling capacity of the framework is outlined by comparing the simulation results with the experimental data of three commonly used elastomeric materials, namely, VHB4910, HNBR50 and carbon black (CB) filled elastomers. The comparison shows that the stress responses and some typical behaviors of filled and unfilled elastomers can be quantitatively predicted by the model with suitable strain energy density functions. Particularly, the strain-softening effect of elastomers could be explained by the deformation-dependent (nonlinear) viscosity of the polymer chains. The presented modeling framework is expected to be useful as a modeling platform for further study on the performance of different type of elastomeric materials.

  5. Watermarked cardiac CT image segmentation using deformable models and the Hermite transform

    NASA Astrophysics Data System (ADS)

    Gomez-Coronel, Sandra L.; Moya-Albor, Ernesto; Escalante-Ramírez, Boris; Brieva, Jorge

    2015-01-01

    Medical image watermarking is an open area for research and is a solution for the protection of copyright and intellectual property. One of the main challenges of this problem is that the marked images should not differ perceptually from the original images allowing a correct diagnosis and authentication. Furthermore, we also aim at obtaining watermarked images with very little numerical distortion so that computer vision tasks such as segmentation of important anatomical structures do not be impaired or affected. We propose a preliminary watermarking application in cardiac CT images based on a perceptive approach that includes a brightness model to generate a perceptive mask and identify the image regions where the watermark detection becomes a difficult task for the human eye. We propose a normalization scheme of the image in order to improve robustness against geometric attacks. We follow a spread spectrum technique to insert an alphanumeric code, such as patient's information, within the watermark. The watermark scheme is based on the Hermite transform as a bio-inspired image representation model. In order to evaluate the numerical integrity of the image data after watermarking, we perform a segmentation task based on deformable models. The segmentation technique is based on a vector-value level sets method such that, given a curve in a specific image, and subject to some constraints, the curve can evolve in order to detect objects. In order to stimulate the curve evolution we introduce simultaneously some image features like the gray level and the steered Hermite coefficients as texture descriptors. Segmentation performance was assessed by means of the Dice index and the Hausdorff distance. We tested different mark sizes and different insertion schemes on images that were later segmented either automatic or manual by physicians.

  6. Two-photon geometrical phase

    NASA Astrophysics Data System (ADS)

    Strekalov, D. V.; Shih, Y. H.

    1997-10-01

    An advanced wave model is applied to a two-photon interference experiment to show that the observed interference effect is due to the geometrical phase of a two-photon state produced in spontaneous parametric down-conversion. The polarization state of the signal-idler pair is changed adiabatically so that the ``loop'' on the Poincaré sphere is opened in the signal channel and closed in the idler channel. Therefore, we observed an essentially nonlocal geometrical phase, shared by the entangled photon pair, or a biphoton.

  7. Efficiencies of power plants, quasi-static models and the geometric-mean temperature

    NASA Astrophysics Data System (ADS)

    Johal, Ramandeep S.

    2017-02-01

    Observed efficiencies of industrial power plants are often approximated by the square-root formula: 1 - √ T -/ T +, where T +( T -) is the highest (lowest) temperature achieved in the plant. This expression can be derived within finite-time thermodynamics, or, by entropy generation minimization, based on finite rates for the processes. In these analyses, a closely related quantity is the optimal value of the intermediate temperature for the hot stream, given by the geometric-mean value: √ T +/ T -. In this paper, instead of finite-time models, we propose to model the operation of plants by quasi-static work extraction models, with one reservoir (source/sink) as finite, while the other as practically infinite. No simplifying assumption is made on the nature of the finite system. This description is consistent with two model hypotheses, each yielding a specific value of the intermediate temperature, say T 1 and T 2. The lack of additional information on validity of the hypothesis that may be actually realized, motivates to approach the problem as an exercise in inductive inference. Thus we define an expected value of the intermediate temperature as the equally weighted mean: ( T 1 + T 2)/2. It is shown that the expected value is very closely given by the geometric-mean value for almost all of the observed power plants.

  8. Influence of pre-salt topographic features on supra-salt deformation in Mediterranean basins: Geology vs. physical models

    NASA Astrophysics Data System (ADS)

    Ferrer, Oriol; Vidal-Royo, Oskar; Gratacós, Oscar; Roca, Eduard; Muñoz, Josep Anton; Esestime, Paolo; Rodriguez, Karyna; Yazmin Piragauta, Mary; Feliu, Nil

    2017-04-01

    ) local seamounts during gravitational gliding (Western Mediterranean) and, 2) large regional reliefs during the emplacement of a thrust system (Eastern Mediterranean). The experimental results of the Western Mediterranean show that the geometry, continuity and orientation of these reliefs with respect to the margin slope are key factors during gravitational failure and influence supra-salt deformation. Experimental results in the Eastern Mediterranean indicate that different responses are obtained along-strike as a consequence of shortening when modeling the Eratosthenes seamount. These differences were basically controlled by the location of the seamount, that was a topographic high during the deposition of the Messinian evaporites. The presence of seamounts in the contractional domain, instead, initially enhanced salt inflation by buttressing and the subsequent development of salt sheets with the formation of an escarpment at the edge of the salt. The experimental results also provide geometrical constraints to bear in mind during interpretation of these structures and associated hydrocarbon plays, which are commonly poorly imaged in seismic data.

  9. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI.

    PubMed

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2015-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions. Copyright © 2014. Published by Elsevier Inc.

  10. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI

    PubMed Central

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2016-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions. PMID:25157446

  11. Rock deformation equations and application to the study on slantingly installed disc cutter

    NASA Astrophysics Data System (ADS)

    Zhang, Zhao-Huang; Meng, Liang; Sun, Fei

    2014-08-01

    At present the mechanical model of the interaction between a disc cutter and rock mainly concerns indentation experiment, linear cutting experiment and tunnel boring machine (TBM) on-site data. This is not in line with the actual rock-breaking movement of the disc cutter and impedes to some extent the research on the rock-breaking mechanism, wear mechanism and design theory. Therefore, our study focuses on the interaction between the slantingly installed disc cutter and rock, developing a model in accordance with the actual rock-breaking movement. Displacement equations are established through an analysis of the velocity vector at the rock-breaking point of the disc cutter blade; the functional relationship between the displacement parameters at the rock-breaking point and its rectangular coordinates is established through an analysis of micro-displacement vectors at the rock-breaking point, thus leading to the geometric equations of rock deformation caused by the slantingly installed disc cutter. Considering the basically linear relationship between the cutting force of disc cutters and the rock deformation before and after the leap break of rock, we express the constitutive relations of rock deformation as generalized Hooke's law and analyze the effect of the slanting installation angle of disc cutters on the rock-breaking force. This will, as we hope, make groundbreaking contributions to the development of the design theory and installation practice of TBM.

  12. Planar dynamics of large-deformation rods under moving loads

    NASA Astrophysics Data System (ADS)

    Zhao, X. W.; van der Heijden, G. H. M.

    2018-01-01

    We formulate the problem of a slender structure (a rod) undergoing large deformation under the action of a moving mass or load motivated by inspection robots crawling along bridge cables or high-voltage power lines. The rod is described by means of geometrically exact Cosserat theory which allows for arbitrary planar flexural, extensional and shear deformations. The equations of motion are discretised using the generalised-α method. The formulation is shown to handle the discontinuities of the problem well. Application of the method to a cable and an arch problem reveals interesting nonlinear phenomena. For the cable problem we find that large deformations have a resonance detuning effect on cable dynamics. The problem also offers a compelling illustration of the Timoshenko paradox. For the arch problem we find a stabilising (delay) effect on the in-plane collapse of the arch, with failure suppressed entirely at sufficiently high speed.

  13. Surrogate-driven deformable motion model for organ motion tracking in particle radiation therapy

    NASA Astrophysics Data System (ADS)

    Fassi, Aurora; Seregni, Matteo; Riboldi, Marco; Cerveri, Pietro; Sarrut, David; Battista Ivaldi, Giovanni; Tabarelli de Fatis, Paola; Liotta, Marco; Baroni, Guido

    2015-02-01

    The aim of this study is the development and experimental testing of a tumor tracking method for particle radiation therapy, providing the daily respiratory dynamics of the patient’s thoraco-abdominal anatomy as a function of an external surface surrogate combined with an a priori motion model. The proposed tracking approach is based on a patient-specific breathing motion model, estimated from the four-dimensional (4D) planning computed tomography (CT) through deformable image registration. The model is adapted to the interfraction baseline variations in the patient’s anatomical configuration. The driving amplitude and phase parameters are obtained intrafractionally from a respiratory surrogate signal derived from the external surface displacement. The developed technique was assessed on a dataset of seven lung cancer patients, who underwent two repeated 4D CT scans. The first 4D CT was used to build the respiratory motion model, which was tested on the second scan. The geometric accuracy in localizing lung lesions, mediated over all breathing phases, ranged between 0.6 and 1.7 mm across all patients. Errors in tracking the surrounding organs at risk, such as lungs, trachea and esophagus, were lower than 1.3 mm on average. The median absolute variation in water equivalent path length (WEL) within the target volume did not exceed 1.9 mm-WEL for simulated particle beams. A significant improvement was achieved compared with error compensation based on standard rigid alignment. The present work can be regarded as a feasibility study for the potential extension of tumor tracking techniques in particle treatments. Differently from current tracking methods applied in conventional radiotherapy, the proposed approach allows for the dynamic localization of all anatomical structures scanned in the planning CT, thus providing complete information on density and WEL variations required for particle beam range adaptation.

  14. Toward efficient biomechanical-based deformable image registration of lungs for image-guided radiotherapy

    NASA Astrophysics Data System (ADS)

    Al-Mayah, Adil; Moseley, Joanne; Velec, Mike; Brock, Kristy

    2011-08-01

    Both accuracy and efficiency are critical for the implementation of biomechanical model-based deformable registration in clinical practice. The focus of this investigation is to evaluate the potential of improving the efficiency of the deformable image registration of the human lungs without loss of accuracy. Three-dimensional finite element models have been developed using image data of 14 lung cancer patients. Each model consists of two lungs, tumor and external body. Sliding of the lungs inside the chest cavity is modeled using a frictionless surface-based contact model. The effect of the type of element, finite deformation and elasticity on the accuracy and computing time is investigated. Linear and quadrilateral tetrahedral elements are used with linear and nonlinear geometric analysis. Two types of material properties are applied namely: elastic and hyperelastic. The accuracy of each of the four models is examined using a number of anatomical landmarks representing the vessels bifurcation points distributed across the lungs. The registration error is not significantly affected by the element type or linearity of analysis, with an average vector error of around 2.8 mm. The displacement differences between linear and nonlinear analysis methods are calculated for all lungs nodes and a maximum value of 3.6 mm is found in one of the nodes near the entrance of the bronchial tree into the lungs. The 95 percentile of displacement difference ranges between 0.4 and 0.8 mm. However, the time required for the analysis is reduced from 95 min in the quadratic elements nonlinear geometry model to 3.4 min in the linear element linear geometry model. Therefore using linear tetrahedral elements with linear elastic materials and linear geometry is preferable for modeling the breathing motion of lungs for image-guided radiotherapy applications.

  15. Analytical volcano deformation source models

    USGS Publications Warehouse

    Lisowski, Michael; Dzurisin, Daniel

    2007-01-01

    Primary volcanic landforms are created by the ascent and eruption of magma. The ascending magma displaces and interacts with surrounding rock and fluids as it creates new pathways, flows through cracks or conduits, vesiculates, and accumulates in underground reservoirs. The formation of new pathways and pressure changes within existing conduits and reservoirs stress and deform the surrounding rock. Eruption products load the crust. The pattern and rate of surface deformation around volcanoes reflect the tectonic and volcanic processes transmitted to the surface through the mechanical properties of the crust.

  16. The deformation behavior of the cervical spine segment

    NASA Astrophysics Data System (ADS)

    Kolmakova, T. V.; Rikun, Yu. A.

    2017-09-01

    The paper describes the model of the cervical spine segment (C3-C4) and the calculation results of its deformation behavior at flexion. The segment model was built based on the experimental literature data taking into account the presence of the cortical and cancellous bone tissue of vertebral bodies. Degenerative changes of the intervertebral disk (IVD) were simulated through a reduction of the disc height and an increase of Young's modulus. The construction of the geometric model of the cervical spine segment and the calculations of the stress-strain state were carried out in the ANSYS software complex. The calculation results show that the biggest protrusion of the IVD in bending direction of segment is observed when IVD height is reduced. The disc protrusion is reduced with an increase of Young's modulus. The largest protrusion in the direction of flexion of the segment is the intervertebral disk with height of 4.3 mm and elastic modulus of 2.5 MPa. The results of the study can be useful to specialists in the field of biomechanics, medical materials science and prosthetics.

  17. Stochastic Geometric Network Models for Groups of Functional and Structural Connectomes

    PubMed Central

    Friedman, Eric J.; Landsberg, Adam S.; Owen, Julia P.; Li, Yi-Ou; Mukherjee, Pratik

    2014-01-01

    Structural and functional connectomes are emerging as important instruments in the study of normal brain function and in the development of new biomarkers for a variety of brain disorders. In contrast to single-network studies that presently dominate the (non-connectome) network literature, connectome analyses typically examine groups of empirical networks and then compare these against standard (stochastic) network models. Current practice in connectome studies is to employ stochastic network models derived from social science and engineering contexts as the basis for the comparison. However, these are not necessarily best suited for the analysis of connectomes, which often contain groups of very closely related networks, such as occurs with a set of controls or a set of patients with a specific disorder. This paper studies important extensions of standard stochastic models that make them better adapted for analysis of connectomes, and develops new statistical fitting methodologies that account for inter-subject variations. The extensions explicitly incorporate geometric information about a network based on distances and inter/intra hemispherical asymmetries (to supplement ordinary degree-distribution information), and utilize a stochastic choice of networks' density levels (for fixed threshold networks) to better capture the variance in average connectivity among subjects. The new statistical tools introduced here allow one to compare groups of networks by matching both their average characteristics and the variations among them. A notable finding is that connectomes have high “smallworldness” beyond that arising from geometric and degree considerations alone. PMID:25067815

  18. Spectral statistics of random geometric graphs

    NASA Astrophysics Data System (ADS)

    Dettmann, C. P.; Georgiou, O.; Knight, G.

    2017-04-01

    We use random matrix theory to study the spectrum of random geometric graphs, a fundamental model of spatial networks. Considering ensembles of random geometric graphs we look at short-range correlations in the level spacings of the spectrum via the nearest-neighbour and next-nearest-neighbour spacing distribution and long-range correlations via the spectral rigidity Δ3 statistic. These correlations in the level spacings give information about localisation of eigenvectors, level of community structure and the level of randomness within the networks. We find a parameter-dependent transition between Poisson and Gaussian orthogonal ensemble statistics. That is the spectral statistics of spatial random geometric graphs fits the universality of random matrix theory found in other models such as Erdős-Rényi, Barabási-Albert and Watts-Strogatz random graphs.

  19. Strong coupling in F-theory and geometrically non-Higgsable seven-branes

    NASA Astrophysics Data System (ADS)

    Halverson, James

    2017-06-01

    Geometrically non-Higgsable seven-branes carry gauge sectors that cannot be broken by complex structure deformation, and there is growing evidence that such configurations are typical in F-theory. We study strongly coupled physics associated with these branes. Axiodilaton profiles are computed using Ramanujan's theories of elliptic functions to alternative bases, showing explicitly that the string coupling is O (1) in the vicinity of the brane; that it sources nilpotent SL (2 , Z) monodromy and therefore the associated brane charges are modular; and that essentially all F-theory compactifications have regions with order one string coupling. It is shown that non-perturbative SU (3) and SU (2) seven-branes are related to weakly coupled counterparts with D7-branes via deformation-induced Hanany-Witten moves on (p , q) string junctions that turn them into fundamental open strings; only the former may exist for generic complex structure. D3-brane near these and the Kodaira type II seven-branes probe Argyres-Douglas theories. The BPS states of slightly deformed theories are shown to be dyonic string junctions.

  20. On the choice of boundary conditions in continuum models of continental deformation

    NASA Technical Reports Server (NTRS)

    Wdowinski, Shimon; O'Connell, Richard J.

    1990-01-01

    Recent studies of continental deformation have treated the lithosphere as a viscous medium and investigated the time evolution of the deformation caused by tectonic and buoyancy forces. This paper examines the differences between (1) continuum models that keep velocity boundary conditions constant with time and (2) models that keep stress boundary conditions constant with time. These differences are demonstrated by using a simple example of a continental lithosphere that is subjected to horizontal compression. The results show that in (2) the indentation velocity decreases with time, while in (1) the indentation velocity remains constant with time.

  1. Clinical application of computer-designed polystyrene models in complex severe spinal deformities: a pilot study

    PubMed Central

    Mao, Keya; Xiao, Songhua; Liu, Zhengsheng; Zhang, Yonggang; Zhang, Xuesong; Wang, Zheng; Lu, Ning; Shourong, Zhu; Xifeng, Zhang; Geng, Cui; Baowei, Liu

    2010-01-01

    Surgical treatment of complex severe spinal deformity, involving a scoliosis Cobb angle of more than 90° and kyphosis or vertebral and rib deformity, is challenging. Preoperative two-dimensional images resulting from plain film radiography, computed tomography (CT) and magnetic resonance imaging provide limited morphometric information. Although the three-dimensional (3D) reconstruction CT with special software can view the stereo and rotate the spinal image on the screen, it cannot show the full-scale spine and cannot directly be used on the operation table. This study was conducted to investigate the application of computer-designed polystyrene models in the treatment of complex severe spinal deformity. The study involved 16 cases of complex severe spinal deformity treated in our hospital between 1 May 2004 and 31 December 2007; the mean ± SD preoperative scoliosis Cobb angle was 118° ± 27°. The CT scanning digital imaging and communication in medicine (DICOM) data sets of the affected spinal segments were collected for 3D digital reconstruction and rapid prototyping to prepare computer-designed polystyrene models, which were applied in the treatment of these cases. The computer-designed polystyrene models allowed 3D observation and measurement of the deformities directly, which helped the surgeon to perform morphological assessment and communicate with the patient and colleagues. Furthermore, the models also guided the choice and placement of pedicle screws. Moreover, the models were used to aid in virtual surgery and guide the actual surgical procedure. The mean ± SD postoperative scoliosis Cobb angle was 42° ± 32°, and no serious complications such as spinal cord or major vascular injury occurred. The use of computer-designed polystyrene models could provide more accurate morphometric information and facilitate surgical correction of complex severe spinal deformity. PMID:20213294

  2. Numerical models of caldera deformation: Effects of multiphase and multicomponent hydrothermal fluid flow

    USGS Publications Warehouse

    Hutnak, M.; Hurwitz, S.; Ingebritsen, S.E.; Hsieh, P.A.

    2009-01-01

    Ground surface displacement (GSD) in large calderas is often interpreted as resulting from magma intrusion at depth. Recent advances in geodetic measurements of GSD, notably interferometric synthetic aperture radar, reveal complex and multifaceted deformation patterns that often require complex source models to explain the observed GSD. Although hydrothermal fluids have been discussed as a possible deformation agent, very few quantitative studies addressing the effects of multiphase flow on crustal mechanics have been attempted. Recent increases in the power and availability of computing resources allow robust quantitative assessment of the complex time-variant thermal interplay between aqueous fluid flow and crustal deformation. We carry out numerical simulations of multiphase (liquid-gas), multicomponent (H 2O-CO2) hydrothermal fluid flow and poroelastic deformation using a range of realistic physical parameters and processes. Hydrothermal fluid injection, circulation, and gas formation can generate complex, temporally and spatially varying patterns of GSD, with deformation rates, magnitudes, and geometries (including subsidence) similar to those observed in several large calderas. The potential for both rapid and gradual deformation resulting from magma-derived fluids suggests that hydrothermal fluid circulation may help explain deformation episodes at calderas that have not culminated in magmatic eruption.

  3. A model for finite-deformation nonlinear thermomechanical response of single crystal copper under shock conditions

    NASA Astrophysics Data System (ADS)

    Luscher, Darby J.; Bronkhorst, Curt A.; Alleman, Coleman N.; Addessio, Francis L.

    2013-09-01

    A physically consistent framework for combining pressure-volume-temperature equations of state with crystal plasticity models is developed for the application of modeling the response of single and polycrystals under shock conditions. The particular model is developed for copper, thus the approach focuses on crystals of cubic symmetry although many of the concepts in the approach are applicable to crystals of lower symmetry. We employ a multiplicative decomposition of the deformation gradient into isochoric elastic, thermoelastic dilation, and plastic parts leading to a definition of isochoric elastic Green-Lagrange strain. This finite deformation kinematic decomposition enables a decomposition of Helmholtz free-energy into terms reflecting dilatational thermoelasticity, strain energy due to long-range isochoric elastic deformation of the lattice and a term reflecting energy stored in short range elastic lattice deformation due to evolving defect structures. A model for the single crystal response of copper is implemented consistent with the framework into a three-dimensional Lagrangian finite element code. Simulations exhibit favorable agreement with single and bicrystal experimental data for shock pressures ranging from 3 to 110 GPa.

  4. Geometric incompatibility in a fault system.

    PubMed Central

    Gabrielov, A; Keilis-Borok, V; Jackson, D D

    1996-01-01

    Interdependence between geometry of a fault system, its kinematics, and seismicity is investigated. Quantitative measure is introduced for inconsistency between a fixed configuration of faults and the slip rates on each fault. This measure, named geometric incompatibility (G), depicts summarily the instability near the fault junctions: their divergence or convergence ("unlocking" or "locking up") and accumulation of stress and deformations. Accordingly, the changes in G are connected with dynamics of seismicity. Apart from geometric incompatibility, we consider deviation K from well-known Saint Venant condition of kinematic compatibility. This deviation depicts summarily unaccounted stress and strain accumulation in the region and/or internal inconsistencies in a reconstruction of block- and fault system (its geometry and movements). The estimates of G and K provide a useful tool for bringing together the data on different types of movement in a fault system. An analog of Stokes formula is found that allows determination of the total values of G and K in a region from the data on its boundary. The phenomenon of geometric incompatibility implies that nucleation of strong earthquakes is to large extent controlled by processes near fault junctions. The junctions that have been locked up may act as transient asperities, and unlocked junctions may act as transient weakest links. Tentative estimates of K and G are made for each end of the Big Bend of the San Andreas fault system in Southern California. Recent strong earthquakes Landers (1992, M = 7.3) and Northridge (1994, M = 6.7) both reduced K but had opposite impact on G: Landers unlocked the area, whereas Northridge locked it up again. Images Fig. 1 Fig. 2 PMID:11607673

  5. Facial Performance Transfer via Deformable Models and Parametric Correspondence.

    PubMed

    Asthana, Akshay; de la Hunty, Miles; Dhall, Abhinav; Goecke, Roland

    2012-09-01

    The issue of transferring facial performance from one person's face to another's has been an area of interest for the movie industry and the computer graphics community for quite some time. In recent years, deformable face models, such as the Active Appearance Model (AAM), have made it possible to track and synthesize faces in real time. Not surprisingly, deformable face model-based approaches for facial performance transfer have gained tremendous interest in the computer vision and graphics community. In this paper, we focus on the problem of real-time facial performance transfer using the AAM framework. We propose a novel approach of learning the mapping between the parameters of two completely independent AAMs, using them to facilitate the facial performance transfer in a more realistic manner than previous approaches. The main advantage of modeling this parametric correspondence is that it allows a "meaningful" transfer of both the nonrigid shape and texture across faces irrespective of the speakers' gender, shape, and size of the faces, and illumination conditions. We explore linear and nonlinear methods for modeling the parametric correspondence between the AAMs and show that the sparse linear regression method performs the best. Moreover, we show the utility of the proposed framework for a cross-language facial performance transfer that is an area of interest for the movie dubbing industry.

  6. [Micropore filters for measuring red blood cell deformability and their pore diameters].

    PubMed

    Niu, X; Yan, Z

    2001-09-01

    Micropore filters are the most important components in micropore filtration testes for assessing red blood cell (RBC) deformability. With regard to their appearance and filtration behaviors, comparisons are made for different kinds of filters currently in use. Nickel filters with regular geometric characteristics are found to be more sensitive to the effects of physical, chemical, especially pathological factors on the RBC deformability. We have critically reviewed the following viewpoint that filters with 3 microns pore diameter are more sensitive to cell volume than to internal viscosity while filters with 5 microns pore diameter are just the opposite. After analyzing the experiment results with 3 microns and 5 microns filters, we point out that filters with smaller pore diameters are more suitable for assessing the RBC deformability.

  7. Efficient High-Fidelity, Geometrically Exact, Multiphysics Structural Models

    DTIC Science & Technology

    2011-10-14

    fuctionally graded core. International Journal for Numerical Methods in Engineering, 68:940– 966, 2006. 7F. Shang, Z. Wang, and Z. Li. Analysis of...normal deformable plate theory and MLPG method with radial basis fuctions . Composite Structures, 80:539– 552, 2007. 17W. Zhen and W. Chen. A higher-order...functionally graded plates by using higher-order shear and normal deformable plate theory and MLPG method with radial basis fuctions . Composite Structures, 80

  8. Auxetic hexachiral structures with wavy ligaments for large elasto-plastic deformation

    NASA Astrophysics Data System (ADS)

    Zhu, Yilin; Wang, Zhen-Pei; Hien Poh, Leong

    2018-05-01

    The hexachiral structure is in-plane isotropic in small deformation. When subjected to large elasto-plastic deformation, however, the hexachiral structure tends to lose its auxeticity and/or isotropy—properties which are desirable in many potential applications. The objective of this study is to improve these two mechanical properties, without significantly compromising the effective yield stress, in the regime with significant material and geometrical nonlinearity effects. It is found that the deformation mechanisms underlying the auxeticity and isotropy properties of a hexachiral structure are largely influenced by the extent of rotation of the central ring in a unit cell. To facilitate the development of this deformation mechanism, an improved design with wavy ligaments is proposed. The improved performance of the proposed hexachiral structure is demonstrated. An initial study on possible applications as a protective material is next carried out, where the improved hexachiral design is shown to exhibit higher specific energy absorption capacity compared to the original design, as well as standard honeycomb structures.

  9. Ductile bookshelf faulting: A new kinematic model for Cenozoic deformation in northern Tibet

    NASA Astrophysics Data System (ADS)

    Zuza, A. V.; Yin, A.

    2013-12-01

    It has been long recognized that the most dominant features on the northern Tibetan Plateau are the >1000 km left-slip strike-slip faults (e.g., the Atyn Tagh, Kunlun, and Haiyuan faults). Early workers used the presence of these faults, especially the Kunlun and Haiyuan faults, as evidence for eastward lateral extrusion of the plateau, but their low documented offsets--100s of km or less--can not account for the 2500 km of convergence between India and Asia. Instead, these faults may result from north-south right-lateral simple shear due to the northward indentation of India, which leads to the clockwise rotation of the strike-slip faults and left-lateral slip (i.e., bookshelf faulting). With this idea, deformation is still localized on discrete fault planes, and 'microplates' or blocks rotate and/or translate with little internal deformation. As significant internal deformation occurs across northern Tibet within strike-slip-bounded domains, there is need for a coherent model to describe all of the deformational features. We also note the following: (1) geologic offsets and Quaternary slip rates of both the Kunlun and Haiyuan faults vary along strike and appear to diminish to the east, (2) the faults appear to kinematically link with thrust belts (e.g., Qilian Shan, Liupan Shan, Longmen Shan, and Qimen Tagh) and extensional zones (e.g., Shanxi, Yinchuan, and Qinling grabens), and (3) temporal relationships between the major deformation zones and the strike-slip faults (e.g., simultaneous enhanced deformation and offset in the Qilian Shan and Liupan Shan, and the Haiyuan fault, at 8 Ma). We propose a new kinematic model to describe the active deformation in northern Tibet: a ductile-bookshelf-faulting model. With this model, right-lateral simple shear leads to clockwise vertical axis rotation of the Qaidam and Qilian blocks, and left-slip faulting. This motion creates regions of compression and extension, dependent on the local boundary conditions (e.g., rigid

  10. Simplified versus geometrically accurate models of forefoot anatomy to predict plantar pressures: A finite element study.

    PubMed

    Telfer, Scott; Erdemir, Ahmet; Woodburn, James; Cavanagh, Peter R

    2016-01-25

    Integration of patient-specific biomechanical measurements into the design of therapeutic footwear has been shown to improve clinical outcomes in patients with diabetic foot disease. The addition of numerical simulations intended to optimise intervention design may help to build on these advances, however at present the time and labour required to generate and run personalised models of foot anatomy restrict their routine clinical utility. In this study we developed second-generation personalised simple finite element (FE) models of the forefoot with varying geometric fidelities. Plantar pressure predictions from barefoot, shod, and shod with insole simulations using simplified models were compared to those obtained from CT-based FE models incorporating more detailed representations of bone and tissue geometry. A simplified model including representations of metatarsals based on simple geometric shapes, embedded within a contoured soft tissue block with outer geometry acquired from a 3D surface scan was found to provide pressure predictions closest to the more complex model, with mean differences of 13.3kPa (SD 13.4), 12.52kPa (SD 11.9) and 9.6kPa (SD 9.3) for barefoot, shod, and insole conditions respectively. The simplified model design could be produced in <1h compared to >3h in the case of the more detailed model, and solved on average 24% faster. FE models of the forefoot based on simplified geometric representations of the metatarsal bones and soft tissue surface geometry from 3D surface scans may potentially provide a simulation approach with improved clinical utility, however further validity testing around a range of therapeutic footwear types is required. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. A point cloud modeling method based on geometric constraints mixing the robust least squares method

    NASA Astrophysics Data System (ADS)

    Yue, JIanping; Pan, Yi; Yue, Shun; Liu, Dapeng; Liu, Bin; Huang, Nan

    2016-10-01

    The appearance of 3D laser scanning technology has provided a new method for the acquisition of spatial 3D information. It has been widely used in the field of Surveying and Mapping Engineering with the characteristics of automatic and high precision. 3D laser scanning data processing process mainly includes the external laser data acquisition, the internal industry laser data splicing, the late 3D modeling and data integration system. For the point cloud modeling, domestic and foreign researchers have done a lot of research. Surface reconstruction technology mainly include the point shape, the triangle model, the triangle Bezier surface model, the rectangular surface model and so on, and the neural network and the Alfa shape are also used in the curved surface reconstruction. But in these methods, it is often focused on single surface fitting, automatic or manual block fitting, which ignores the model's integrity. It leads to a serious problems in the model after stitching, that is, the surfaces fitting separately is often not satisfied with the well-known geometric constraints, such as parallel, vertical, a fixed angle, or a fixed distance. However, the research on the special modeling theory such as the dimension constraint and the position constraint is not used widely. One of the traditional modeling methods adding geometric constraints is a method combing the penalty function method and the Levenberg-Marquardt algorithm (L-M algorithm), whose stability is pretty good. But in the research process, it is found that the method is greatly influenced by the initial value. In this paper, we propose an improved method of point cloud model taking into account the geometric constraint. We first apply robust least-squares to enhance the initial value's accuracy, and then use penalty function method to transform constrained optimization problems into unconstrained optimization problems, and finally solve the problems using the L-M algorithm. The experimental results

  12. Multiscale Modeling of Primary Cilium Deformations Under Local Forces and Shear Flows

    NASA Astrophysics Data System (ADS)

    Peng, Zhangli; Feng, Zhe; Resnick, Andrew; Young, Yuan-Nan

    2017-11-01

    We study the detailed deformations of a primary cilium under local forces and shear flows by developing a multiscale model based on the state-of-the-art understanding of its molecular structure. Most eukaryotic cells are ciliated with primary cilia. Primary cilia play important roles in chemosensation, thermosensation, and mechanosensation, but the detailed mechanism for mechanosensation is not well understood. We apply the dissipative particle dynamics (DPD) to model an entire well with a primary cilium and consider its different components, including the basal body, microtubule doublets, actin cortex, and lipid bilayer. We calibrate the mechanical properties of individual components and their interactions from experimental measurements and molecular dynamics simulations. We validate the simulations by comparing the deformation profile of the cilium and the rotation of the basal body with optical trapping experiments. After validations, we investigate the deformation of the primary cilium under shear flows. Furthermore, we calculate the membrane tensions and cytoskeleton stresses, and use them to predict the activation of mechanosensitive channels.

  13. Initial singularity and pure geometric field theories

    NASA Astrophysics Data System (ADS)

    Wanas, M. I.; Kamal, Mona M.; Dabash, Tahia F.

    2018-01-01

    In the present article we use a modified version of the geodesic equation, together with a modified version of the Raychaudhuri equation, to study initial singularities. These modified equations are used to account for the effect of the spin-torsion interaction on the existence of initial singularities in cosmological models. Such models are the results of solutions of the field equations of a class of field theories termed pure geometric. The geometric structure used in this study is an absolute parallelism structure satisfying the cosmological principle. It is shown that the existence of initial singularities is subject to some mathematical (geometric) conditions. The scheme suggested for this study can be easily generalized.

  14. Supergravity backgrounds for deformations of AdS n × S n supercoset string models

    DOE PAGES

    Lunin, O.; Roiban, R.; Tseytlin, A. A.

    2014-12-11

    We considermore » type IIB supergravity backgrounds corresponding to the deformed AdS n × S n × T 10 - 2 n supercoset string models of the type constructed in arXiv:1309.5850[2] which depend on one deformation parameter κ. In AdS 2 × S 2 case we find that the deformed metric can be extended to a full supergravity solution with non-trivial dilaton, RR scalar and RR 5-form strength. The solution depends on a free parameter a that should be chosen as a particular function of κ to correspond to the deformed supercoset model. In AdS 3 × S 3 case the full solution supported by the dilaton, RR scalar and RR 3-form strength exists only in the two special cases, a = 0 and a = 1 . We conjecture that there may be a more general one-parameter solution supported by several RR fields that for particular a = a ( κ ) corresponds to the supercoset model. In the most complicated deformed AdS 5 × S 5 case we were able to find only the expressions for the dilaton and the RR scalar. The full solution is likely to be supported by a combination of the 5-form and 3-form field strengths. We comment on the singularity structure of the resulting metric and exact dilaton field.« less

  15. Supergravity backgrounds for deformations of AdS n × S n supercoset string models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lunin, O.; Roiban, R.; Tseytlin, A. A.

    We considermore » type IIB supergravity backgrounds corresponding to the deformed AdS n × S n × T 10 - 2 n supercoset string models of the type constructed in arXiv:1309.5850[2] which depend on one deformation parameter κ. In AdS 2 × S 2 case we find that the deformed metric can be extended to a full supergravity solution with non-trivial dilaton, RR scalar and RR 5-form strength. The solution depends on a free parameter a that should be chosen as a particular function of κ to correspond to the deformed supercoset model. In AdS 3 × S 3 case the full solution supported by the dilaton, RR scalar and RR 3-form strength exists only in the two special cases, a = 0 and a = 1 . We conjecture that there may be a more general one-parameter solution supported by several RR fields that for particular a = a ( κ ) corresponds to the supercoset model. In the most complicated deformed AdS 5 × S 5 case we were able to find only the expressions for the dilaton and the RR scalar. The full solution is likely to be supported by a combination of the 5-form and 3-form field strengths. We comment on the singularity structure of the resulting metric and exact dilaton field.« less

  16. Geometric, Kinematic and Radiometric Aspects of Image-Based Measurements

    NASA Technical Reports Server (NTRS)

    Liu, Tianshu

    2002-01-01

    This paper discusses theoretical foundations of quantitative image-based measurements for extracting and reconstructing geometric, kinematic and dynamic properties of observed objects. New results are obtained by using a combination of methods in perspective geometry, differential geometry. radiometry, kinematics and dynamics. Specific topics include perspective projection transformation. perspective developable conical surface, perspective projection under surface constraint, perspective invariants, the point correspondence problem. motion fields of curves and surfaces. and motion equations of image intensity. The methods given in this paper arc useful for determining morphology and motion fields of deformable bodies such as elastic bodies. viscoelastic mediums and fluids.

  17. Finite Element Model and Validation of Nasal Tip Deformation

    PubMed Central

    Manuel, Cyrus T; Harb, Rani; Badran, Alan; Ho, David; Wong, Brian JF

    2016-01-01

    Nasal tip mechanical stability is important for functional and cosmetic nasal airway surgery. Palpation of the nasal tip provides information on tip strength to the surgeon, though it is a purely subjective assessment. Providing a means to simulate nasal tip deformation with a validated model can offer a more objective approach in understanding the mechanics and nuances of the nasal tip support and eventual nasal mechanics as a whole. Herein we present validation of a finite element (FE) model of the nose using physical measurements recorded using an ABS plastic-silicone nasal phantom. Three-dimensional photogrammetry was used to capture the geometry of the phantom at rest and while under steady state load. The silicone used to make the phantom was mechanically tested and characterized using a linear elastic constitutive model. Surface point clouds of the silicone and FE model were compared for both the loaded and unloaded state. The average Hausdorff distance between actual measurements and FE simulations across the nose were 0.39mm ± 1.04 mm and deviated up to 2mm at the outermost boundaries of the model. FE simulation and measurements were in near complete agreement in the immediate vicinity of the nasal tip with millimeter accuracy. We have demonstrated validation of a two-component nasal FE model, which could be used to model more complex modes of deformation where direct measurement may be challenging. This is the first step in developing a nasal model to simulate nasal mechanics and ultimately the interaction between geometry and airflow. PMID:27633018

  18. Finite Element Model and Validation of Nasal Tip Deformation.

    PubMed

    Manuel, Cyrus T; Harb, Rani; Badran, Alan; Ho, David; Wong, Brian J F

    2017-03-01

    Nasal tip mechanical stability is important for functional and cosmetic nasal airway surgery. Palpation of the nasal tip provides information on tip strength to the surgeon, though it is a purely subjective assessment. Providing a means to simulate nasal tip deformation with a validated model can offer a more objective approach in understanding the mechanics and nuances of the nasal tip support and eventual nasal mechanics as a whole. Herein we present validation of a finite element (FE) model of the nose using physical measurements recorded using an ABS plastic-silicone nasal phantom. Three-dimensional photogrammetry was used to capture the geometry of the phantom at rest and while under steady state load. The silicone used to make the phantom was mechanically tested and characterized using a linear elastic constitutive model. Surface point clouds of the silicone and FE model were compared for both the loaded and unloaded state. The average Hausdorff distance between actual measurements and FE simulations across the nose were 0.39 ± 1.04 mm and deviated up to 2 mm at the outermost boundaries of the model. FE simulation and measurements were in near complete agreement in the immediate vicinity of the nasal tip with millimeter accuracy. We have demonstrated validation of a two-component nasal FE model, which could be used to model more complex modes of deformation where direct measurement may be challenging. This is the first step in developing a nasal model to simulate nasal mechanics and ultimately the interaction between geometry and airflow.

  19. Quantification of localized vertebral deformities using a sparse wavelet-based shape model.

    PubMed

    Zewail, R; Elsafi, A; Durdle, N

    2008-01-01

    Medical experts often examine hundreds of spine x-ray images to determine existence of various pathologies. Common pathologies of interest are anterior osteophites, disc space narrowing, and wedging. By careful inspection of the outline shapes of the vertebral bodies, experts are able to identify and assess vertebral abnormalities with respect to the pathology under investigation. In this paper, we present a novel method for quantification of vertebral deformation using a sparse shape model. Using wavelets and Independent component analysis (ICA), we construct a sparse shape model that benefits from the approximation power of wavelets and the capability of ICA to capture higher order statistics in wavelet space. The new model is able to capture localized pathology-related shape deformations, hence it allows for quantification of vertebral shape variations. We investigate the capability of the model to predict localized pathology related deformations. Next, using support-vector machines, we demonstrate the diagnostic capabilities of the method through the discrimination of anterior osteophites in lumbar vertebrae. Experiments were conducted using a set of 150 contours from digital x-ray images of lumbar spine. Each vertebra is labeled as normal or abnormal. Results reported in this work focus on anterior osteophites as the pathology of interest.

  20. Semantic modeling of the structural and process entities during plastic deformation of crystals and rocks

    NASA Astrophysics Data System (ADS)

    Babaie, Hassan; Davarpanah, Armita

    2016-04-01

    We are semantically modeling the structural and dynamic process components of the plastic deformation of minerals and rocks in the Plastic Deformation Ontology (PDO). Applying the Ontology of Physics in Biology, the PDO classifies the spatial entities that participate in the diverse processes of plastic deformation into the Physical_Plastic_Deformation_Entity and Nonphysical_Plastic_Deformation_Entity classes. The Material_Physical_Plastic_Deformation_Entity class includes things such as microstructures, lattice defects, atoms, liquid, and grain boundaries, and the Immaterial_Physical_Plastic_Deformation_Entity class includes vacancies in crystals and voids along mineral grain boundaries. The objects under the many subclasses of these classes (e.g., crystal, lattice defect, layering) have spatial parts that are related to each other through taxonomic (e.g., Line_Defect isA Lattice_Defect), structural (mereological, e.g., Twin_Plane partOf Twin), spatial-topological (e.g., Vacancy adjacentTo Atom, Fluid locatedAlong Grain_Boundary), and domain specific (e.g., displaces, Fluid crystallizes Dissolved_Ion, Void existsAlong Grain_Boundary) relationships. The dynamic aspect of the plastic deformation is modeled under the dynamical Process_Entity class that subsumes classes such as Recrystallization and Pressure_Solution that define the flow of energy amongst the physical entities. The values of the dynamical state properties of the physical entities (e.g., Chemical_Potential, Temperature, Particle_Velocity) change while they take part in the deformational processes such as Diffusion and Dislocation_Glide. The process entities have temporal parts (phases) that are related to each other through temporal relations such as precedes, isSubprocessOf, and overlaps. The properties of the physical entities, defined under the Physical_Property class, change as they participate in the plastic deformational processes. The properties are categorized into dynamical, constitutive

  1. Combining the bi-Yang-Baxter deformation, the Wess-Zumino term and TsT transformations in one integrable σ-model

    NASA Astrophysics Data System (ADS)

    Delduc, F.; Hoare, B.; Kameyama, T.; Magro, M.

    2017-10-01

    A multi-parameter integrable deformation of the principal chiral model is presented. The Yang-Baxter and bi-Yang-Baxter σ-models, the principal chiral model plus a Wess-Zumino term and the TsT transformation of the principal chiral model are all recovered when the appropriate deformation parameters vanish. When the Lie group is SU(2), we show that this four-parameter integrable deformation of the SU(2) principal chiral model corresponds to the Lukyanov model.

  2. Relationship between the cranial base and the mandible in artificially deformed skulls.

    PubMed

    Ferros, I; Mora, M J; Obeso, I F; Jimenez, P; Martinez-Insua, A

    2016-11-01

    There is controversy regarding the relationship between mandibular position and alterations of the cranial base that provoke a more anterior location of the glenoid fossa. Artificially deformed skulls display marked alterations of the cranial base. This study evaluates mandibular changes as function of the morphology of the cranial base in these skulls. A geometric morphometric study was performed on lateral cephalometric X-rays of three groups of skulls: 32 with anteroposterior deformity, 17 with circumferential deformity and 39 with no apparent deformity. In artificially deformed skulls, the cranial base was deformed causing the mandibular condyle to be in a more anterior position. There was a complete remodelling of the mandible involving narrowing and elongation of the mandibular ramus, rotation of the corpus of the mandible and increased vertical height of the symphysis. Forward displacement did not occur. Integration between mandible and cranial base is not altered by deformation of the skull. Deformity of the cranial vault exerts an influence on the mandible, supporting the theory of modular units in complete integration. This also supports the theory that mandibular prognathism is a multifactorial result and not a direct effect of displacement of the cranial base. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  3. Sparsity-promoting inversion for modeling of irregular volcanic deformation source

    NASA Astrophysics Data System (ADS)

    Zhai, G.; Shirzaei, M.

    2016-12-01

    Kīlauea volcano, Hawaíi Island, has a complex magmatic system. Nonetheless, kinematic models of the summit reservoir have so far been limited to first-order analytical solutions with pre-determined geometry. To investigate the complex geometry and kinematics of the summit reservoir, we apply a multitrack multitemporal wavelet-based InSAR (Interferometric Synthetic Aperture Radar) algorithm and a geometry-free time-dependent modeling scheme considering a superposition of point centers of dilatation (PCDs). Applying Principal Component Analysis (PCA) to the time-dependent source model, six spatially independent deformation zones (i.e., reservoirs) are identified, whose locations are consistent with previous studies. Time-dependence of the model allows also identifying periods of correlated or anti-correlated behaviors between reservoirs. Hence, we suggest that likely the reservoir are connected and form a complex magmatic reservoir [Zhai and Shirzaei, 2016]. To obtain a physically-meaningful representation of the complex reservoir, we devise a new sparsity-promoting modeling scheme assuming active magma bodies are well-localized melt accumulations (i.e., outliers in background crust). The major steps include inverting surface deformation data using a hybrid L-1 and L-2 norm regularization approach to solve for sparse volume change distribution and then implementing a BEM based method to solve for opening distribution on a triangular mesh representing the complex reservoir. Using this approach, we are able to constrain the internal excess pressure of magma body with irregular geometry, satisfying uniformly pressurized boundary condition on the surface of magma chamber. The inversion method with sparsity constraint is tested using five synthetic source geometries, including torus, prolate ellipsoid, and sphere as well as horizontal and vertical L-shape bodies. The results show that source dimension, depth and shape are well recovered. Afterward, we apply this

  4. Evaluating Topographic Effects on Ground Deformation: Insights from Finite Element Modeling

    NASA Astrophysics Data System (ADS)

    Ronchin, Erika; Geyer, Adelina; Martí, Joan

    2015-07-01

    Ground deformation has been demonstrated to be one of the most common signals of volcanic unrest. Although volcanoes are commonly associated with significant topographic relief, most analytical models assume the Earth's surface as flat. However, it has been confirmed that this approximation can lead to important misinterpretations of the recorded surface deformation data. Here we perform a systematic and quantitative analysis of how topography may influence ground deformation signals generated by a spherical pressure source embedded in an elastic homogeneous media and how these variations correlate with the different topographic parameters characterizing the terrain form (e.g., slope, aspect, curvature). For this, we bring together the results presented in previous published papers and complement them with new axisymmetric and 3D finite element (FE) model results. First, we study, in a parametric way, the influence of a volcanic edifice centered above the pressure source axis. Second, we carry out new 3D FE models simulating the real topography of three different volcanic areas representative of topographic scenarios common in volcanic regions: Rabaul caldera (Papua New Guinea) and the volcanic islands of Tenerife and El Hierro (Canary Islands). The calculated differences are then correlated with a series of topographic parameters. The final aim is to investigate the artifacts that might arise from the use of half-space models at volcanic areas due to diverse topographic features (e.g., collapse caldera structures, prominent central edifices, large landslide scars).

  5. Linking numerical models of lithospheric deformation and magnetotelluric images

    NASA Astrophysics Data System (ADS)

    Sobolev, S. V.

    2012-12-01

    Efficient modeling of geodynamic processes requires constraints from different fields of geosciences. Frequently used are data on crustal structure and composition and their evolution constrained by seismic, gravity and petrological/geochemical studies. However, links between geodynamic modeling and rapidly developing field of magnetotelluric (MT) studies are still insufficient. I'll consider two recent examples of MT observations and geodynamic modeling demonstrating that joint analyses of thermomechanical models of lithospheric deformation and MT images may be useful to understand geodynamic processes. One set of observations is MT data for San Andreas Fault (SAF) in the region close to the SAFOD Site (Becken et al., 2011) that shows high conductivity anomalies in the mantle, that are interpreted as fluid flow feeding creeping part of SAF south of the SAFOD Site. Interestingly, zones of high conductivity do not coincide with the expected zones of the recent active deformation (SAF), but are located to the west of it. Based on thermomechanical model of the evolution of the SAFS in Central and Northern California during the last 20 Mln. years (Popov et al., 2012), I'll demonstrate that high conductivity anomalies precisely coincide with the expected zones of the highest accumulated shear strain. Possible interpretation of this coincidence is that strong preferred orientation of olivine crystals in the highly deformed mantle shear zone causes high permeability of fluids. Another set of observations is MT data showing high conductivity anomalies in the crust of Tibet (Unsworh et al., 2005, Bai et al., 2010) and Pamirs (Sass et al., 2011) that are often interpreted as an evidence for the widely spread partially molten crust. Using 2D thermomechanical models of the collision between India and Eurasia, I'll demonstrate that such structures in the crust cannot appear without delamination of the mantle lithosphere during tectonic shortening. Internal heating of the

  6. A Lattice Boltzmann Fictitious Domain Method for Modeling Red Blood Cell Deformation and Multiple-Cell Hydrodynamic Interactions in Flow

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shi, Xing; Lin, Guang; Zou, Jianfeng

    To model red blood cell (RBC) deformation in flow, the recently developed LBM-DLM/FD method ([Shi and Lim, 2007)29], derived from the lattice Boltzmann method and the distributed Lagrange multiplier/fictitious domain methodthe fictitious domain method, is extended to employ the mesoscopic network model for simulations of red blood cell deformation. The flow is simulated by the lattice Boltzmann method with an external force, while the network model is used for modeling red blood cell deformation and the fluid-RBC interaction is enforced by the Lagrange multiplier. To validate parameters of the RBC network model, sThe stretching numerical tests on both coarse andmore » fine meshes are performed and compared with the corresponding experimental data to validate the parameters of the RBC network model. In addition, RBC deformation in pipe flow and in shear flow is simulated, revealing the capacity of the current method for modeling RBC deformation in various flows.« less

  7. Quantifying the errors due to the superposition of analytical deformation sources

    NASA Astrophysics Data System (ADS)

    Neuberg, J. W.; Pascal, K.

    2012-04-01

    The displacement field due to magma movement in the subsurface is often modelled using a Mogi point source or a dislocation Okada source embedded in a homogeneous elastic half-space. When the magmatic system cannot be modelled by a single source it is often represented by several sources, their respective deformation fields are superimposed. However, in such a case the assumption of homogeneity in the half-space is violated and the interaction between sources in an elastic medium is neglected. In this investigation we have quantified the effects of neglecting the interaction between sources on the surface deformation field. To do so, we calculated the vertical and horizontal displacements for models with adjacent sources and we tested them against the solutions of corresponding numerical 3D finite element models. We implemented several models combining spherical pressure sources and dislocation sources, varying the pressure or dislocation of the sources and their relative position. We also investigated three numerical methods to model a dike as a dislocation tensile source or as a pressurized tabular crack. We found that the discrepancies between simple superposition of the displacement field and a fully interacting numerical solution depend mostly on the source types and on their spacing. The errors induced when neglecting the source interaction are expected to vary greatly with the physical and geometrical parameters of the model. We demonstrated that for certain scenarios these discrepancies can be neglected (<5%) when the sources are separated by at least 4 radii for two combined Mogi sources and by at least 3 radii for juxtaposed Mogi and Okada sources

  8. Geometric modeling of controlled third-class hinged mechanisms with a stand in one extreme position for cyclic automatic machines

    NASA Astrophysics Data System (ADS)

    Khomchenko, V. G.; Varepo, L. G.; Glukhov, V. I.; Krivokhatko, E. A.

    2017-06-01

    The geometric model for the synthesis of third-class lever mechanisms is proposed, which allows, by changing the length of the auxiliary link and the position of its fixed hinge, to rearrange the movement of the working organ onto the cyclograms with different predetermined dwell times. It is noted that with the help of the proposed model, at the expense of the corresponding geometric constructions, the best uniform Chebyshev approximation can be achieved at the interval of the standstill.

  9. Genotypic Complexity of Fisher’s Geometric Model

    PubMed Central

    Hwang, Sungmin; Park, Su-Chan; Krug, Joachim

    2017-01-01

    Fisher’s geometric model was originally introduced to argue that complex adaptations must occur in small steps because of pleiotropic constraints. When supplemented with the assumption of additivity of mutational effects on phenotypic traits, it provides a simple mechanism for the emergence of genotypic epistasis from the nonlinear mapping of phenotypes to fitness. Of particular interest is the occurrence of reciprocal sign epistasis, which is a necessary condition for multipeaked genotypic fitness landscapes. Here we compute the probability that a pair of randomly chosen mutations interacts sign epistatically, which is found to decrease with increasing phenotypic dimension n, and varies nonmonotonically with the distance from the phenotypic optimum. We then derive expressions for the mean number of fitness maxima in genotypic landscapes comprised of all combinations of L random mutations. This number increases exponentially with L, and the corresponding growth rate is used as a measure of the complexity of the landscape. The dependence of the complexity on the model parameters is found to be surprisingly rich, and three distinct phases characterized by different landscape structures are identified. Our analysis shows that the phenotypic dimension, which is often referred to as phenotypic complexity, does not generally correlate with the complexity of fitness landscapes and that even organisms with a single phenotypic trait can have complex landscapes. Our results further inform the interpretation of experiments where the parameters of Fisher’s model have been inferred from data, and help to elucidate which features of empirical fitness landscapes can be described by this model. PMID:28450460

  10. Mechanics of tunable helices and geometric frustration in biomimetic seashells

    NASA Astrophysics Data System (ADS)

    Guo, Qiaohang; Chen, Zi; Li, Wei; Dai, Pinqiang; Ren, Kun; Lin, Junjie; Taber, Larry A.; Chen, Wenzhe

    2014-03-01

    Helical structures are ubiquitous in nature and engineering, ranging from DNA molecules to plant tendrils, from sea snail shells to nanoribbons. While the helical shapes in natural and engineered systems often exhibit nearly uniform radius and pitch, helical shell structures with changing radius and pitch, such as seashells and some plant tendrils, add to the variety of this family of aesthetic beauty. Here we develop a comprehensive theoretical framework for tunable helical morphologies, and report the first biomimetic seashell-like structure resulting from mechanics of geometric frustration. In previous studies, the total potential energy is everywhere minimized when the system achieves equilibrium. In this work, however, the local energy minimization cannot be realized because of the geometric incompatibility, and hence the whole system deforms into a shape with a global energy minimum whereby the energy in each segment may not necessarily be locally optimized. This novel approach can be applied to develop materials and devices of tunable geometries with a range of applications in nano/biotechnology.

  11. Automatic extraction of three-dimensional thoracic aorta geometric model from phase contrast MRI for morphometric and hemodynamic characterization.

    PubMed

    Volonghi, Paola; Tresoldi, Daniele; Cadioli, Marcello; Usuelli, Antonio M; Ponzini, Raffaele; Morbiducci, Umberto; Esposito, Antonio; Rizzo, Giovanna

    2016-02-01

    To propose and assess a new method that automatically extracts a three-dimensional (3D) geometric model of the thoracic aorta (TA) from 3D cine phase contrast MRI (PCMRI) acquisitions. The proposed method is composed of two steps: segmentation of the TA and creation of the 3D geometric model. The segmentation algorithm, based on Level Set, was set and applied to healthy subjects acquired in three different modalities (with and without SENSE reduction factors). Accuracy was evaluated using standard quality indices. The 3D model is characterized by the vessel surface mesh and its centerline; the comparison of models obtained from the three different datasets was also carried out in terms of radius of curvature (RC) and average tortuosity (AT). In all datasets, the segmentation quality indices confirmed very good agreement between manual and automatic contours (average symmetric distance < 1.44 mm, DICE Similarity Coefficient > 0.88). The 3D models extracted from the three datasets were found to be comparable, with differences of less than 10% for RC and 11% for AT. Our method was found effective on PCMRI data to provide a 3D geometric model of the TA, to support morphometric and hemodynamic characterization of the aorta. © 2015 Wiley Periodicals, Inc.

  12. Left Atrial trajectory impairment in Hypertrophic Cardiomyopathy disclosed by Geometric Morphometrics and Parallel Transport

    NASA Astrophysics Data System (ADS)

    Piras, Paolo; Torromeo, Concetta; Re, Federica; Evangelista, Antonietta; Gabriele, Stefano; Esposito, Giuseppe; Nardinocchi, Paola; Teresi, Luciano; Madeo, Andrea; Chialastri, Claudia; Schiariti, Michele; Varano, Valerio; Uguccioni, Massimo; Puddu, Paolo E.

    2016-10-01

    The analysis of full Left Atrium (LA) deformation and whole LA deformational trajectory in time has been poorly investigated and, to the best of our knowledge, seldom discussed in patients with Hypertrophic Cardiomyopathy. Therefore, we considered 22 patients with Hypertrophic Cardiomyopathy (HCM) and 46 healthy subjects, investigated them by three-dimensional Speckle Tracking Echocardiography, and studied the derived landmark clouds via Geometric Morphometrics with Parallel Transport. Trajectory shape and trajectory size were different in Controls versus HCM and their classification powers had high AUC (Area Under the Receiving Operator Characteristic Curve) and accuracy. The two trajectories were much different at the transition between LA conduit and booster pump functions. Full shape and deformation analyses with trajectory analysis enabled a straightforward perception of pathophysiological consequences of HCM condition on LA functioning. It might be worthwhile to apply these techniques to look for novel pathophysiological approaches that may better define atrio-ventricular interaction.

  13. Insights from the Lattice-Strain Evolution on Deformation Mechanisms in Metallic-Glass-Matrix Composites

    DOE PAGES

    Jia, Haoling; Zheng, Lili; Li, Weidong; ...

    2015-02-18

    In this paper, in situ high-energy synchrotron X-ray diffraction experiments and micromechanics-based finite element simulations have been conducted to examine the lattice-strain evolution in metallic-glass-matrix composites (MGMCs) with dendritic crystalline phases dispersed in the metallic-glass matrix. Significant plastic deformation can be observed prior to failure from the macroscopic stress–strain curves in these MGMCs. The entire lattice-strain evolution curves can be divided into elastic–elastic (denoting deformation behavior of matrix and inclusion, respectively), elastic–plastic, and plastic–plastic stages. Characteristics of these three stages are governed by the constitutive laws of the two phases (modeled by free-volume theory and crystal plasticity) and geometric informationmore » (crystalline phase morphology and distribution). The load-partitioning mechanisms have been revealed among various crystalline orientations and between the two phases, as determined by slip strain fields in crystalline phase and by strain localizations in matrix. Finally, implications on ductility enhancement of MGMCs are also discussed.« less

  14. Geometric interpretations for resonances of plasmonic nanoparticles

    NASA Astrophysics Data System (ADS)

    Liu, Wei; Oulton, Rupert F.; Kivshar, Yuri S.

    2015-07-01

    The field of plasmonics can be roughly categorized into two branches: surface plasmon polaritons (SPPs) propagating in waveguides and localized surface plasmons (LSPs) supported by scattering particles. Investigations along these two directions usually employ different approaches, resulting in more or less a dogma that the two branches progress almost independently of each other, with few interactions. Here in this work we interpret LSPs from a Bohr model based geometric perspective relying on SPPs, thus establishing a connection between these two sub-fields. Besides the clear explanations of conventional scattering features of plasmonic nanoparticles, based on this geometric model we further demonstrate other anomalous scattering features (higher order modes supported at lower frequencies, and blueshift of the resonance with increasing particle sizes) and multiple electric resonances of the same order supported at different frequencies, which have been revealed to originate from backward SPP modes and multiple dispersion bands supported in the corresponding plasmonic waveguides, respectively. Inspired by this geometric model, it is also shown that, through solely geometric tuning, the absorption of each LSP resonance can be maximized to reach the single channel absorption limit, provided that the scattering and absorption rates are tuned to be equal.

  15. Structural evolution of fault zones in sandstone by multiple deformation mechanisms: Moab fault, southeast Utah

    USGS Publications Warehouse

    Davatzes, N.C.; Eichhubl, P.; Aydin, A.

    2005-01-01

    Faults in sandstone are frequently composed of two classes of structures: (1) deformation bands and (2) joints and sheared joints. Whereas the former structures are associated with cataclastic deformation, the latter ones represent brittle fracturing, fragmentation, and brecciation. We investigated the distribution of these structures, their formation, and the underlying mechanical controls for their occurrence along the Moab normal fault in southeastern Utah through the use of structural mapping and numerical elastic boundary element modeling. We found that deformation bands occur everywhere along the fault, but with increased density in contractional relays. Joints and sheared joints only occur at intersections and extensional relays. In all locations , joints consistently overprint deformation bands. Localization of joints and sheared joints in extensional relays suggests that their distribution is controlled by local variations in stress state that are due to mechanical interaction between the fault segments. This interpretation is consistent with elastic boundary element models that predict a local reduction in mean stress and least compressive principal stress at intersections and extensional relays. The transition from deformation band to joint formation along these sections of the fault system likely resulted from the combined effects of changes in remote tectonic loading, burial depth, fluid pressure, and rock properties. In the case of the Moab fault, we conclude that the structural heterogeneity in the fault zone is systematically related to the geometric evolution of the fault, the local state of stress associated with fault slip , and the remote loading history. Because the type and distribution of structures affect fault permeability and strength, our results predict systematic variations in these parameters with fault evolution. ?? 2004 Geological Society of America.

  16. Numerical investigation of compaction of deformable particles with bonded-particle model

    NASA Astrophysics Data System (ADS)

    Dosta, Maksym; Costa, Clara; Al-Qureshi, Hazim

    2017-06-01

    In this contribution, a novel approach developed for the microscale modelling of particles which undergo large deformations is presented. The proposed method is based on the bonded-particle model (BPM) and multi-stage strategy to adjust material and model parameters. By the BPM, modelled objects are represented as agglomerates which consist of smaller ideally spherical particles and are connected with cylindrical solid bonds. Each bond is considered as a separate object and in each time step the forces and moments acting in them are calculated. The developed approach has been applied to simulate the compaction of elastomeric rubber particles as single particles or in a random packing. To describe the complex mechanical behaviour of the particles, the solid bonds were modelled as ideally elastic beams. The functional parameters of solid bonds as well as material parameters of bonds and primary particles were estimated based on the experimental data for rubber spheres. Obtained results for acting force and for particle deformations during uniaxial compression are in good agreement with experimental data at higher strains.

  17. Measurement system and model for simultaneously measuring 6DOF geometric errors.

    PubMed

    Zhao, Yuqiong; Zhang, Bin; Feng, Qibo

    2017-09-04

    A measurement system to simultaneously measure six degree-of-freedom (6DOF) geometric errors is proposed. The measurement method is based on a combination of mono-frequency laser interferometry and laser fiber collimation. A simpler and more integrated optical configuration is designed. To compensate for the measurement errors introduced by error crosstalk, element fabrication error, laser beam drift, and nonparallelism of two measurement beam, a unified measurement model, which can improve the measurement accuracy, is deduced and established using the ray-tracing method. A numerical simulation using the optical design software Zemax is conducted, and the results verify the correctness of the model. Several experiments are performed to demonstrate the feasibility and effectiveness of the proposed system and measurement model.

  18. Proton-neutron sdg boson model and spherical-deformed phase transition

    NASA Astrophysics Data System (ADS)

    Otsuka, Takaharu; Sugita, Michiaki

    1988-12-01

    The spherical-deformed phase transition in nuclei is described in terms of the proton-neutron sdg interacting boson model. The sdg hamiltonian is introduced to model the pairing+quadrupole interaction. The phase transition is reproduced in this framework as a function of the boson number in the Sm isotopes, while all parameters in the hamiltonian are kept constant at values reasonable from the shell-model point of view. The sd IBM is derived from this model through the renormalization of g-boson effects.

  19. Characterising the effect of global and local geometric imperfections on the numerical performance of a brace member

    NASA Astrophysics Data System (ADS)

    Hassan, M. S.; Goggins, J.; Salawdeh, S.

    2015-07-01

    A numerical imperfection study is carried out on a hot rolled tubular brace member under displacement controlled amplitudes. An appropriate range of global and local imperfections is used in the finite element analyses to evaluate the initial-post buckling compressive strength, lateral storey drift, energy dissipation and mid-length lateral deformation of the brace member. The purpose of this study is to assess the impact of the geometrical imperfection on the numerical performance, and to determine an amplitude range that can be used unequivocally for numerical modelling of brace members. It is shown that the amplitude of global imperfections has an effect on the initial response, whereas the amplitude of local imperfections has influence on the resistance capacity of the brace member at higher ductility level. Based on the results, a refined range of amplitude of global and local imperfections is proposed. This range is found to have a good agreement with design standards. In addition, an already established equation to find lateral deformation is compared to results from the analyses and found that the equation with some modification can be used accurately in design. In this paper, a modification factor is proposed in the equation to find the lateral deformation to account for the imperfection amplitude in the numerical analyses of brace members.

  20. Midpoint attractors and species richness: Modelling the interaction between environmental drivers and geometric constraints.

    PubMed

    Colwell, Robert K; Gotelli, Nicholas J; Ashton, Louise A; Beck, Jan; Brehm, Gunnar; Fayle, Tom M; Fiedler, Konrad; Forister, Matthew L; Kessler, Michael; Kitching, Roger L; Klimes, Petr; Kluge, Jürgen; Longino, John T; Maunsell, Sarah C; McCain, Christy M; Moses, Jimmy; Noben, Sarah; Sam, Katerina; Sam, Legi; Shapiro, Arthur M; Wang, Xiangping; Novotny, Vojtech

    2016-09-01

    We introduce a novel framework for conceptualising, quantifying and unifying discordant patterns of species richness along geographical gradients. While not itself explicitly mechanistic, this approach offers a path towards understanding mechanisms. In this study, we focused on the diverse patterns of species richness on mountainsides. We conjectured that elevational range midpoints of species may be drawn towards a single midpoint attractor - a unimodal gradient of environmental favourability. The midpoint attractor interacts with geometric constraints imposed by sea level and the mountaintop to produce taxon-specific patterns of species richness. We developed a Bayesian simulation model to estimate the location and strength of the midpoint attractor from species occurrence data sampled along mountainsides. We also constructed midpoint predictor models to test whether environmental variables could directly account for the observed patterns of species range midpoints. We challenged these models with 16 elevational data sets, comprising 4500 species of insects, vertebrates and plants. The midpoint predictor models generally failed to predict the pattern of species midpoints. In contrast, the midpoint attractor model closely reproduced empirical spatial patterns of species richness and range midpoints. Gradients of environmental favourability, subject to geometric constraints, may parsimoniously account for elevational and other patterns of species richness. © 2016 John Wiley & Sons Ltd/CNRS.

  1. Experimental Investigation of the Influence of Joint Geometric Configurations on the Mechanical Properties of Intermittent Jointed Rock Models Under Cyclic Uniaxial Compression

    NASA Astrophysics Data System (ADS)

    Liu, Yi; Dai, Feng; Fan, Pengxian; Xu, Nuwen; Dong, Lu

    2017-06-01

    Intermittent joints in rock mass are quite sensitive to cyclic loading conditions. Understanding the fatigue mechanical properties of jointed rocks is beneficial for rational design and stability analysis of rock engineering projects. This study experimentally investigated the influences of joint geometry (i.e., dip angle, persistency, density and spacing) on the fatigue mechanism of synthetic jointed rock models. Our results revealed that the stress-strain curve of jointed rock under cyclic loadings is dominated by its curve under monotonic uniaxial loadings; the terminal strain in fatigue curve is equal to the post-peak strain corresponding to the maximum cyclic stress in the monotonic stress-strain curve. The four joint geometrical parameters studied significantly affect the fatigue properties of jointed rocks, including the irreversible strains, the fatigue deformation modulus, the energy evolution, the damage variable and the crack coalescence patterns. The higher the values of the geometrical parameters, the lower the elastic energy stores in this jointed rock, the higher the fatigue damage accumulates in the first few cycles, and the lower the fatigue life. The elastic energy has certain storage limitation, at which the fatigue failure occurs. Two basic micro-cracks, i.e., tensile wing crack and shear crack, are observed in cyclic loading and unloading tests, which are controlled principally by joint dip angle and persistency. In general, shear cracks only occur in the jointed rock with higher dip angle or higher persistency, and the jointed rock is characterized by lower fatigue strength, larger damage variable and lower fatigue life.

  2. Buckling of pressure-loaded, long, shear deformable, cylindrical laminated shells

    NASA Astrophysics Data System (ADS)

    Anastasiadis, John S.; Simitses, George J.

    A higher-order shell theory was developed (kinematic relations, constitutive relations, equilibrium equations and boundary conditions), which includes initial geometric imperfections and transverse shear effects for a laminated cylindrical shell under the action of pressure, axial compression and in-plane shear. Through the perturbation technique, buckling equations are derived for the corresponding 'perfect geometry' symmetric laminated configuration. Critical pressures are computed for very long cylinders for several stacking sequences, several radius-to-total-thickness ratios, three lamina materials (boron/epoxy, graphite/epoxy, and Kevlar/epoxy), and three shell theories: classical, first-order shear deformable and higher- (third-)order shear deformable. The results provide valuable information concerning the applicability (accurate prediction of buckling pressures) of the various shell theories.

  3. Enhancements to NURBS-Based FEA Airfoil Modeler: SABER

    NASA Technical Reports Server (NTRS)

    Saleeb, A. F.; Trowbridge, D. A.

    2003-01-01

    NURBS (Non-Uniform Rational B-Splines) have become a common way for CAD programs to fit a smooth surface to discrete geometric data. This concept has been extended to allow for the fitting of analysis data in a similar manner and "attaching" the analysis data to the geometric definition of the structure. The "attaching" of analysis data to the geometric definition allows for a more seamless sharing of data between analysis disciplines. NURBS have become a useful tool in the modeling of airfoils. The use of NURBS has allowed for the development of software that easily and consistently generates plate finite element models of the midcamber surface of a given airfoil. The resulting displacements can then be applied to the original airfoil surface and the deformed shape calculated.

  4. Sea-ice deformation in a coupled ocean-sea-ice model and in satellite remote sensing data

    NASA Astrophysics Data System (ADS)

    Spreen, Gunnar; Kwok, Ron; Menemenlis, Dimitris; Nguyen, An T.

    2017-07-01

    A realistic representation of sea-ice deformation in models is important for accurate simulation of the sea-ice mass balance. Simulated sea-ice deformation from numerical simulations with 4.5, 9, and 18 km horizontal grid spacing and a viscous-plastic (VP) sea-ice rheology are compared with synthetic aperture radar (SAR) satellite observations (RGPS, RADARSAT Geophysical Processor System) for the time period 1996-2008. All three simulations can reproduce the large-scale ice deformation patterns, but small-scale sea-ice deformations and linear kinematic features (LKFs) are not adequately reproduced. The mean sea-ice total deformation rate is about 40 % lower in all model solutions than in the satellite observations, especially in the seasonal sea-ice zone. A decrease in model grid spacing, however, produces a higher density and more localized ice deformation features. The 4.5 km simulation produces some linear kinematic features, but not with the right frequency. The dependence on length scale and probability density functions (PDFs) of absolute divergence and shear for all three model solutions show a power-law scaling behavior similar to RGPS observations, contrary to what was found in some previous studies. Overall, the 4.5 km simulation produces the most realistic divergence, vorticity, and shear when compared with RGPS data. This study provides an evaluation of high and coarse-resolution viscous-plastic sea-ice simulations based on spatial distribution, time series, and power-law scaling metrics.

  5. Geometrical Calibration of the Photo-Spectral System and Digital Maps Retrieval

    NASA Astrophysics Data System (ADS)

    Bruchkouskaya, S.; Skachkova, A.; Katkovski, L.; Martinov, A.

    2013-12-01

    Imaging systems for remote sensing of the Earth are required to demonstrate high metric accuracy of the picture which can be provided through preliminary geometrical calibration of optical systems. Being defined as a result of the geometrical calibration, parameters of internal and external orientation of the cameras are needed while solving such problems of image processing, as orthotransformation, geometrical correction, geographical coordinate fixing, scale adjustment and image registration from various channels and cameras, creation of image mosaics of filmed territories, and determination of geometrical characteristics of objects in the images. The geometrical calibration also helps to eliminate image deformations arising due to manufacturing defects and errors in installation of camera elements and photo receiving matrices as well as those resulted from lens distortions. A Photo-Spectral System (PhSS), which is intended for registering reflected radiation spectra of underlying surfaces in a wavelength range from 350 nm to 1050 nm and recording images of high spatial resolution, has been developed at the A.N. Sevchenko Research Institute of Applied Physical Problems of the Belarusian State University. The PhSS has undergone flight tests over the territory of Belarus onboard the Antonov AN-2 aircraft with the aim to obtain visible range images of the underlying surface. Then we performed the geometrical calibration of the PhSS and carried out the correction of images obtained during the flight tests. Furthermore, we have plotted digital maps of the terrain using the stereo pairs of images acquired from the PhSS and evaluated the accuracy of the created maps. Having obtained the calibration parameters, we apply them for correction of the images from another identical PhSS device, which is located at the Russian Orbital Segment of the International Space Station (ROS ISS), aiming to retrieve digital maps of the terrain with higher accuracy.

  6. Frame junction vibration transmission with a modified frame deformation model.

    PubMed

    Moore, J A

    1990-12-01

    A previous paper dealt with vibration transmission through junctions of connected frame members where the allowed frame deformations included bending, torsion, and longitudinal motions [J.A. Moore, J. Acoust. Soc. Am. 88, 2766-2776 (1990)]. In helicopter and aircraft structures the skin panels can constitute a high impedance connection along the length of the frames that effectively prohibits in-plane motion at the elevation of the skin panels. This has the effect of coupling in-plane bending and torsional motions within the frame. This paper discusses the transmission behavior through frame junctions that accounts for the in-plane constraint in idealized form by assuming that the attached skin panels completely prohibit inplane motion in the frames. Also, transverse shear deformation is accounted for in describing the relatively deep web frame constructions common in aircraft structures. Longitudinal motion in the frames is not included in the model. Transmission coefficient predictions again show the importance of out-of-plane bending deformation to the transmission of vibratory energy in an aircraft structure. Comparisons are shown with measured vibration transmission data along the framing in the overhead of a helicopter airframe, with good agreement. The frame junction description has been implemented within a general purpose statistical energy analysis (SEA) computer code in modeling the entire airframe structure including skin panels.

  7. Patterns of Alloy Deformation by Pulsed Pressure

    NASA Astrophysics Data System (ADS)

    Chebotnyagin, L. M.; Potapov, V. V.; Lopatin, V. V.

    2015-06-01

    Patterns of alloy deformation for optimization of a welding regime are studied by the method of modeling and deformation profiles providing high deformation quality are determined. A model of stepwise kinetics of the alloy deformation by pulsed pressure from the expanding plasma channel inside of a deformable cylinder is suggested. The model is based on the analogy between the acoustic and electromagnetic wave processes in long lines. The shock wave pattern of alloy deformation in the presence of multiple reflections of pulsed pressure waves in the gap plasma channel - cylinder wall and the influence of unloading waves from free surfaces are confirmed.

  8. A mechanical model for deformable and mesh pattern wheel of lunar roving vehicle

    NASA Astrophysics Data System (ADS)

    Liang, Zhongchao; Wang, Yongfu; Chen, Gang (Sheng); Gao, Haibo

    2015-12-01

    As an indispensable tool for astronauts on lunar surface, the lunar roving vehicle (LRV) is of great significance for manned lunar exploration. An LRV moves on loose and soft lunar soil, so the mechanical property of its wheels directly affects the mobility performance. The wheels used for LRV have deformable and mesh pattern, therefore, the existing mechanical theory of vehicle wheel cannot be used directly for analyzing the property of LRV wheels. In this paper, a new mechanical model for LRV wheel is proposed. At first, a mechanical model for a rigid normal wheel is presented, which involves in multiple conventional parameters such as vertical load, tangential traction force, lateral force, and slip ratio. Secondly, six equivalent coefficients are introduced to amend the rigid normal wheel model to fit for the wheels with deformable and mesh-pattern in LRV application. Thirdly, the values of the six equivalent coefficients are identified by using experimental data obtained in an LRV's single wheel testing. Finally, the identified mechanical model for LRV's wheel with deformable and mesh pattern are further verified and validated by using additional experimental results.

  9. Modelling and visualizing distributed compressional plate deformation using GPlates2.0: The Arctic Eurekan Orogeny

    NASA Astrophysics Data System (ADS)

    Gion, Austin; Williams, Simon; Müller, Dietmar

    2017-04-01

    Present-day distributed plate deformation is being mapped and simulated in great detail, largely based on satellite observations. In contrast, the modelling of and data assimilation into deforming plate models for the geological past is still in its infancy. The recently released GPLates2.0 (www.gplates.org) software provides a framework for building plate models including diffuse deformation. Here we present an application example for the Eurekan orogeny, a Paleogene tectonic event driven by sea floor spreading in the Labrador Sea and Baffin Bay, resulting in compression between NW Greenland and the Canadian Arctic. The complexity of the region has prompted the development of countless tectonic models over the last 100 years. Our new tectonic model incorporates a variety of geological field and geophysical observations to model rigid and diffuse plate deformation in this region. Compression driven by Greenland's northward motion contemporaneous with sea floor spreading in the Labrador Sea, shortens Ellesmere Island in a "fan" like pattern, creating a series of thrust faults. Our model incorporates two phases of tectonic events during the orogeny from 63-35 Ma. Phase one from 63 to 55 Ma incorporates 85 km of Paleocene extension between Ellesmere Island and Devon Island with extension of 20 km between Axel Heiberg Island and Ellesmere Island and 85 km of left-lateral strike-slip along the Nares Strait/Judge Daly Fault System, matching a range of 50-100 km indicated by the offset of marker beds, facies contacts, and platform margins between the conjugate Greenland and Ellesmere Island margins. Phase two from 55 to 35 Ma captures 30 km of east-west shortening and 200 km of north-south shortening from Ellesmere Island to the Canadian Arctic Island margins. Our model extends the boundaries of the Eurekan Orogeny northward, considering its effect on the Lomonosov Ridge, Morris Jessup Rise, and the Yermak Plateau , favouring a model in which the Lomonosov Ridge moves

  10. A Geometric Model for Specularity Prediction on Planar Surfaces with Multiple Light Sources.

    PubMed

    Morgand, Alexandre; Tamaazousti, Mohamed; Bartoli, Adrien

    2018-05-01

    Specularities are often problematic in computer vision since they impact the dynamic range of the image intensity. A natural approach would be to predict and discard them using computer graphics models. However, these models depend on parameters which are difficult to estimate (light sources, objects' material properties and camera). We present a geometric model called JOLIMAS: JOint LIght-MAterial Specularity, which predicts the shape of specularities. JOLIMAS is reconstructed from images of specularities observed on a planar surface. It implicitly includes light and material properties, which are intrinsic to specularities. This model was motivated by the observation that specularities have a conic shape on planar surfaces. The conic shape is obtained by projecting a fixed quadric on the planar surface. JOLIMAS thus predicts the specularity using a simple geometric approach with static parameters (object material and light source shape). It is adapted to indoor light sources such as light bulbs and fluorescent lamps. The prediction has been tested on synthetic and real sequences. It works in a multi-light context by reconstructing a quadric for each light source with special cases such as lights being switched on or off. We also used specularity prediction for dynamic retexturing and obtained convincing rendering results. Further results are presented as supplementary video material, which can be found on the Computer Society Digital Library at http://doi.ieeecomputersociety.org/10.1109/TVCG.2017.2677445.

  11. Masticatory loadings and cranial deformation in Macaca fascicularis: a finite element analysis sensitivity study

    PubMed Central

    Fitton, L C; Shi, J F; Fagan, M J; O’Higgins, P

    2012-01-01

    Biomechanical analyses are commonly conducted to investigate how craniofacial form relates to function, particularly in relation to dietary adaptations. However, in the absence of corresponding muscle activation patterns, incomplete muscle data recorded experimentally for different individuals during different feeding tasks are frequently substituted. This study uses finite element analysis (FEA) to examine the sensitivity of the mechanical response of a Macaca fascicularis cranium to varying muscle activation patterns predicted via multibody dynamic analysis. Relative to the effects of varying bite location, the consequences of simulated variations in muscle activation patterns and of the inclusion/exclusion of whole muscle groups were investigated. The resulting cranial deformations were compared using two approaches; strain maps and geometric morphometric analyses. The results indicate that, with bite force magnitude controlled, the variations among the mechanical responses of the cranium to bite location far outweigh those observed as a consequence of varying muscle activations. However, zygomatic deformation was an exception, with the activation levels of superficial masseter being most influential in this regard. The anterior portion of temporalis deforms the cranial vault, but the remaining muscles have less profound effects. This study for the first time systematically quantifies the sensitivity of an FEA model of a primate skull to widely varying masticatory muscle activations and finds that, with the exception of the zygomatic arch, reasonable variants of muscle loading for a second molar bite have considerably less effect on cranial deformation and the resulting strain map than does varying molar bite point. The implication is that FEA models of biting crania will generally produce acceptable estimates of deformation under load as long as muscle activations and forces are reasonably approximated. In any one FEA study, the biological significance of the

  12. Matching Aerial Images to 3D Building Models Using Context-Based Geometric Hashing

    PubMed Central

    Jung, Jaewook; Sohn, Gunho; Bang, Kiin; Wichmann, Andreas; Armenakis, Costas; Kada, Martin

    2016-01-01

    A city is a dynamic entity, which environment is continuously changing over time. Accordingly, its virtual city models also need to be regularly updated to support accurate model-based decisions for various applications, including urban planning, emergency response and autonomous navigation. A concept of continuous city modeling is to progressively reconstruct city models by accommodating their changes recognized in spatio-temporal domain, while preserving unchanged structures. A first critical step for continuous city modeling is to coherently register remotely sensed data taken at different epochs with existing building models. This paper presents a new model-to-image registration method using a context-based geometric hashing (CGH) method to align a single image with existing 3D building models. This model-to-image registration process consists of three steps: (1) feature extraction; (2) similarity measure; and matching, and (3) estimating exterior orientation parameters (EOPs) of a single image. For feature extraction, we propose two types of matching cues: edged corner features representing the saliency of building corner points with associated edges, and contextual relations among the edged corner features within an individual roof. A set of matched corners are found with given proximity measure through geometric hashing, and optimal matches are then finally determined by maximizing the matching cost encoding contextual similarity between matching candidates. Final matched corners are used for adjusting EOPs of the single airborne image by the least square method based on collinearity equations. The result shows that acceptable accuracy of EOPs of a single image can be achievable using the proposed registration approach as an alternative to a labor-intensive manual registration process. PMID:27338410

  13. A discrete model for geometrically nonlinear transverse free constrained vibrations of beams with various end conditions

    NASA Astrophysics Data System (ADS)

    Rahmouni, A.; Beidouri, Z.; Benamar, R.

    2013-09-01

    The purpose of the present paper was the development of a physically discrete model for geometrically nonlinear free transverse constrained vibrations of beams, which may replace, if sufficient degrees of freedom are used, the previously developed continuous nonlinear beam constrained vibration models. The discrete model proposed is an N-Degrees of Freedom (N-dof) system made of N masses placed at the ends of solid bars connected by torsional springs, presenting the beam flexural rigidity. The large transverse displacements of the bar ends induce a variation in their lengths giving rise to axial forces modelled by longitudinal springs. The calculations made allowed application of the semi-analytical model developed previously for nonlinear structural vibration involving three tensors, namely the mass tensor mij, the linear rigidity tensor kij and the nonlinearity tensor bijkl. By application of Hamilton's principle and spectral analysis, the nonlinear vibration problem is reduced to a nonlinear algebraic system, examined for increasing numbers of dof. The results obtained by the physically discrete model showed a good agreement and a quick convergence to the equivalent continuous beam model, for various fixed boundary conditions, for both the linear frequencies and the nonlinear backbone curves, and also for the corresponding mode shapes. The model, validated here for the simply supported and clamped ends, may be used in further works to present the flexural linear and nonlinear constrained vibrations of beams with various types of discontinuities in the mass or in the elasticity distributions. The development of an adequate discrete model including the effect of the axial strains induced by large displacement amplitudes, which is predominant in geometrically nonlinear transverse constrained vibrations of beams [1]. The investigation of the results such a discrete model may lead to in the case of nonlinear free vibrations. The development of the analogy between the

  14. Computer aided segmentation of kidneys using locally shape constrained deformable models on CT images

    NASA Astrophysics Data System (ADS)

    Erdt, Marius; Sakas, Georgios

    2010-03-01

    This work presents a novel approach for model based segmentation of the kidney in images acquired by Computed Tomography (CT). The developed computer aided segmentation system is expected to support computer aided diagnosis and operation planning. We have developed a deformable model based approach based on local shape constraints that prevents the model from deforming into neighboring structures while allowing the global shape to adapt freely to the data. Those local constraints are derived from the anatomical structure of the kidney and the presence and appearance of neighboring organs. The adaptation process is guided by a rule-based deformation logic in order to improve the robustness of the segmentation in areas of diffuse organ boundaries. Our work flow consists of two steps: 1.) a user guided positioning and 2.) an automatic model adaptation using affine and free form deformation in order to robustly extract the kidney. In cases which show pronounced pathologies, the system also offers real time mesh editing tools for a quick refinement of the segmentation result. Evaluation results based on 30 clinical cases using CT data sets show an average dice correlation coefficient of 93% compared to the ground truth. The results are therefore in most cases comparable to manual delineation. Computation times of the automatic adaptation step are lower than 6 seconds which makes the proposed system suitable for an application in clinical practice.

  15. Computational Study of Uniaxial Deformations in Silica Aerogel Using a Coarse-Grained Model.

    PubMed

    Ferreiro-Rangel, Carlos A; Gelb, Lev D

    2015-07-09

    Simulations of a flexible coarse-grained model are used to study silica aerogels. This model, introduced in a previous study (J. Phys. Chem. C 2007, 111, 15792), consists of spherical particles which interact through weak nonbonded forces and strong interparticle bonds that may form and break during the simulations. Small-deformation simulations are used to determine the elastic moduli of a wide range of material models, and large-deformation simulations are used to probe structural evolution and plastic deformation. Uniaxial deformation at constant transverse pressure is simulated using two methods: a hybrid Monte Carlo approach combining molecular dynamics for the motion of individual particles and stochastic moves for transverse stress equilibration, and isothermal molecular dynamics simulations at fixed Poisson ratio. Reasonable agreement on elastic moduli is obtained except at very low densities. The model aerogels exhibit Poisson ratios between 0.17 and 0.24, with higher-density gels clustered around 0.20, and Young's moduli that vary with aerogel density according to a power-law dependence with an exponent near 3.0. These results are in agreement with reported experimental values. The models are shown to satisfy the expected homogeneous isotropic linear-elastic relationship between bulk and Young's moduli at higher densities, but there are systematic deviations at the lowest densities. Simulations of large compressive and tensile strains indicate that these materials display a ductile-to-brittle transition as the density is increased, and that the tensile strength varies with density according to a power law, with an exponent in reasonable agreement with experiment. Auxetic behavior is observed at large tensile strains in some models. Finally, at maximum tensile stress very few broken bonds are found in the materials, in accord with the theory that only a small fraction of the material structure is actually load-bearing.

  16. 3D Deformation at the Coso Geothermal Field - Observations and Models

    NASA Astrophysics Data System (ADS)

    Hetland, E. A.; Hager, B. H.; McClusky, S.; King, R. W.

    2001-12-01

    Over the past decade, rapid ground deformation has been measured over the Coso geothermal field in Eastern CA using InSAR and GPS. InSAR resolves changes in distance along the line-of-sight (LOS) to the satellite with high spatial coverage. In the Coso geothermal field the maximum LOS displacements are up to 35 mm/yr. The inclination of the LOS is acute (about 20 degrees), hence the majority of the deformation resolved with InSAR is vertical, however LOS displacements are also affected by horizontal displacements. The ratio of the sensitivity of LOS displacements to vertical and horizontal displacements is at most 5 to 2, for horizontal displacements inline with the LOS. GPS is able to resolve large horizontal displacements in this area, leading to the conclusion that the InSAR LOS displacement fields are non-trivially affected by horizontal displacements. Additionally, since the horizontal displacements are large, GPS is also able to resolve vertical displacements. Moreover, the GPS three component velocities are fairly consistent with the LOS displacements from InSAR. This deformation has been largely attributed to subsidence as fluid is extracted from the geothermal reservoir. The reservoir has been previously modeled as deflating elliptical volumes and as collapsing sills. The elliptical volumes are described as Mogi sources, which are mathematically given as point forces along a line. The collapsing sills are treated as Okada dislocations for finite area faults with pure tensile displacements across them. In both of these dislocation models of the reservoir, the elastic moduli of the rock remains constant with changing fluid pressure. Actual reservoirs are more likely composed of regions of rock permeated with fluid-filled cracks and pores. In such a composite material, changing the pore-fluid pressure changes the elastic moduli of the region. These moduli changes cause the region to deform under loading, thus resulting in observed surface displacements. The

  17. Deformations in VLBI antennas

    NASA Technical Reports Server (NTRS)

    Clark, T. A.; Thomsen, P.

    1988-01-01

    A study is presented of deformations in antennas with the emphasis on their influence on VLBI measurements. The GIFTS structural analysis program has been used to model the VLBI antenna in Fairbanks (Alaska). The report identifies key deformations and studies the effect of gravity, wind, and temperature. Estimates of expected deformations are given.

  18. Affine q-deformed symmetry and the classical Yang-Baxter σ-model

    NASA Astrophysics Data System (ADS)

    Delduc, F.; Kameyama, T.; Magro, M.; Vicedo, B.

    2017-03-01

    The Yang-Baxter σ-model is an integrable deformation of the principal chiral model on a Lie group G. The deformation breaks the G × G symmetry to U(1)rank( G) × G. It is known that there exist non-local conserved charges which, together with the unbroken U(1)rank( G) local charges, form a Poisson algebra [InlineMediaObject not available: see fulltext.], which is the semiclassical limit of the quantum group {U}_q(g) , with g the Lie algebra of G. For a general Lie group G with rank( G) > 1, we extend the previous result by constructing local and non-local conserved charges satisfying all the defining relations of the infinite-dimensional Poisson algebra [InlineMediaObject not available: see fulltext.], the classical analogue of the quantum loop algebra {U}_q(Lg) , where Lg is the loop algebra of g. Quite unexpectedly, these defining relations are proved without encountering any ambiguity related to the non-ultralocality of this integrable σ-model.

  19. Modeling and Measurement of 3D Deformation of Scoliotic Spine Using 2D X-ray Images

    NASA Astrophysics Data System (ADS)

    Li, Hao; Leow, Wee Kheng; Huang, Chao-Hui; Howe, Tet Sen

    Scoliosis causes deformations such as twisting and lateral bending of the spine. To correct scoliotic deformation, the extents of 3D spinal deformation need to be measured. This paper studies the modeling and measurement of scoliotic spine based on 3D curve model. Through modeling the spine as a 3D Cosserat rod, the 3D structure of a scoliotic spine can be recovered by obtaining the minimum potential energy registration of the rod to the scoliotic spine in the x-ray image. Test results show that it is possible to obtain accurate 3D reconstruction using only the landmarks in a single view, provided that appropriate boundary conditions and elastic properties are included as constraints.

  20. Geometric Model of Topological Insulators from the Maxwell Algebra

    NASA Astrophysics Data System (ADS)

    Palumbo, Giandomenico

    I propose a novel geometric model of time-reversal-invariant topological insulators in three dimensions in presence of an external electromagnetic field. Their gapped boundary supports relativistic quantum Hall states and is described by a Chern-Simons theory, where the gauge connection takes values in the Maxwell algebra. This represents a non-central extension of the Poincare' algebra and takes into account both the Lorentz and magnetic-translation symmetries of the surface states. In this way, I derive a relativistic version of the Wen-Zee term and I show that the non-minimal coupling between the background geometry and the electromagnetic field in the model is in agreement with the main properties of the relativistic quantum Hall states in the flat space. This work is part of the DITP consortium, a program of the Netherlands Organisation for Scientific Research (NWO) that is funded by the Dutch Ministry of Education, Culture and Science (OCW).

  1. Data-Driven Modeling and Rendering of Force Responses from Elastic Tool Deformation

    PubMed Central

    Rakhmatov, Ruslan; Ogay, Tatyana; Jeon, Seokhee

    2018-01-01

    This article presents a new data-driven model design for rendering force responses from elastic tool deformation. The new design incorporates a six-dimensional input describing the initial position of the contact, as well as the state of the tool deformation. The input-output relationship of the model was represented by a radial basis functions network, which was optimized based on training data collected from real tool-surface contact. Since the input space of the model is represented in the local coordinate system of a tool, the model is independent of recording and rendering devices and can be easily deployed to an existing simulator. The model also supports complex interactions, such as self and multi-contact collisions. In order to assess the proposed data-driven model, we built a custom data acquisition setup and developed a proof-of-concept rendering simulator. The simulator was evaluated through numerical and psychophysical experiments with four different real tools. The numerical evaluation demonstrated the perceptual soundness of the proposed model, meanwhile the user study revealed the force feedback of the proposed simulator to be realistic. PMID:29342964

  2. Aspects of Shape Coexistence in the Geometric Collective Model of Nuclei

    NASA Astrophysics Data System (ADS)

    Georgoudis, P. E.; Leviatan, A.

    2018-02-01

    We examine the coexistence of spherical and γ-unstable deformed nuclear shapes, described by an SO(5)-invariant Bohr Hamiltonian, along the critical-line. Calculations are performed in the Algebraic Collective Model by introducing two separate bases, optimized to accommodate simultaneously different forms of dynamics. We demonstrate the need to modify the β-dependence of the moments of inertia, in order to obtain an adequate description of such shape-coexistence.

  3. Deformation of ferrofluid marbles in the presence of a permanent magnet.

    PubMed

    Nguyen, Nam-Trung

    2013-11-12

    This paper investigates the deformation of ferrofluid marbles in the presence of a permanent magnet. Ferrofluid marbles are formed using a water-based ferrofluid and 1 μm hydrophobic polytetrafluoride particles. A marble placed on a Teflon coated glass plate deforms under gravity. In the presence of a permanent magnet, the marble is further deformed with a larger contact area. The geometric parameters are normalized by the radius of an undistorted spherical marble. The paper first discusses a scaling relationship between the dimensionless radius of the contact area as well as the dimensionless height and the magnetic Bond number. The dimensionless contact radius is proportional to the fourth root of the magnetic bond number. The dimensionless height scales with the inverse square root of the magnetic Bond number. In the case of a moving marble dragged by a permanent magnet, the deformation is evaluated as the difference between advancing and receding curvatures of the top view. The dimensionless height and the contact diameter of the marble do not significantly depend on the speed or the capillary number. The scaling analysis and experimental data show that the deformation is proportional to the capillary number.

  4. Strength of Rocks Affected by Deformation Enhanced Grain Growth

    NASA Astrophysics Data System (ADS)

    Kellermann Slotemaker, A.; de Bresser, H.; Spiers, C.

    2005-12-01

    modeling package ELLE. Synthetic olivine samples that were heat treated without straining showed only minor grain growth. Presumably, the second phase (enstatite) and/or porosity remaining in the starting material after densification slowed down or inhibited SED-GBM in the static situation. In contrast, samples heat treated and deformed for time durations similar to those of the static tests demonstrated, at identical temperature, an increase in grain size with increasing strain up to a value twice that of the static counterpart. This grain coarsening was associated with continuous hardening of the material, witnessed by the stress-strain curves. A random lattice preferred orientation combined with a low stress sensitivity (n~2) suggested dominant GSS creep controlled by grain boundary sliding. A dynamic grain growth model involving an increase in the fraction of non-hexagonal grains, related to grain neighbor switching, appears applicable to the observed grain growth that is held responsible for the hardening. The ELLE numerical modeling demonstrated that a combination of SED-GBM and geometrical deformation of a 2D grain aggregate can indeed result in enhanced grain growth compared to static grain growth tests. The fraction of non-hexagonal grains was found to remain more or less constant during static grain growth but increased during deformation. We suggest that the application of the dynamic grain growth model to the long-term microstructural evolution of fine-grained lithospheric shear zones can further improve our understanding of the transient or permanent character of strain localizations and related rheological behavior.

  5. An anthropomorphic abdominal phantom for deformable image registration accuracy validation in adaptive radiation therapy.

    PubMed

    Liao, Yuliang; Wang, Linjing; Xu, Xiangdong; Chen, Haibin; Chen, Jiawei; Zhang, Guoqian; Lei, Huaiyu; Wang, Ruihao; Zhang, Shuxu; Gu, Xuejun; Zhen, Xin; Zhou, Linghong

    2017-06-01

    To design and construct a three-dimensional (3D) anthropomorphic abdominal phantom for geometric accuracy and dose summation accuracy evaluations of deformable image registration (DIR) algorithms for adaptive radiation therapy (ART). Organ molds, including liver, kidney, spleen, stomach, vertebra, and two metastasis tumors, were 3D printed using contours from an ovarian cancer patient. The organ molds were molded with deformable gels made of different mixtures of polyvinyl chloride (PVC) and the softener dioctyl terephthalate. Gels with different densities were obtained by a polynomial fitting curve that described the relation between the Hounsfield unit (HU) and PVC-softener blending ratio. The rigid vertebras were constructed by molding of white cement and cellulose pulp. The final abdominal phantom was assembled by arranging all the fabricated organs inside a hollow dummy according to their anatomies, and sealed by deformable gel with averaged HU of muscle and fat. Fiducial landmarks were embedded inside the phantom for spatial accuracy and dose accumulation accuracy studies. Two channels were excavated to facilitate ionization chamber insertion for dosimetric measurements. Phantom properties such as deformable gel elasticity and HU stability were studied. The dosimetric measurement accuracy in the phantom was performed, and the DIR accuracies of three DIR algorithms available in the open source DIR toolkit-DIRART were also validated. The constructed deformable gel showed elastic behavior and was stable in HU values over times, proving to be a practical material for the deformable phantom. The constructed abdominal phantom consisted of realistic anatomies in terms of both anatomical shapes and densities when compared with its reference patient. The dosimetric measurements showed a good agreement with the calculated doses from the treatment planning system. Fiducial-based accuracy analysis conducted on the constructed phantom demonstrated the feasibility of

  6. Nonlocal postbuckling analysis of graphene sheets with initial imperfection based on first order shear deformation theory

    NASA Astrophysics Data System (ADS)

    Soleimani, Ahmad; Naei, Mohammad Hasan; Mashhadi, Mahmoud Mosavi

    In this paper, the first order shear deformation theory (FSDT) is used to investigate the postbuckling behavior of orthotropic single-layered graphene sheet (SLGS) under in-plane loadings. Nonlocal elasticity theory and von-Karman nonlinear model in combination with the isogeometric analysis (IGA) have been applied to study the postbuckling characteristics of SLGSs. In contrast to the classical model, the nonlocal continuum model developed in this work considers the size-effects on the postbuckling characteristics of SLGSs. FSDT takes into account effects of shear deformations through-the-thickness of plate. Geometric imperfection which is defined as a very small transverse displacement of the mid-plane is applied on undeformed nanoplate to create initial deviation in graphene sheet from being perfectly flat. Nonlinear governing equations of motion for SLGS are derived from the principle of virtual work and a variational formulation. At the end, the results are presented as the postbuckling equilibrium paths of SLGS. The influence of various parameters such as edge length, nonlocal parameter, compression ratio, boundary conditions and aspect ratio on the postbuckling path is investigated. The results of this work show the high accuracy of nonlocal FSDT-based analysis for postbuckling behavior of graphene sheets.

  7. Test of a geometric model for the modification stage of simple impact crater development

    NASA Technical Reports Server (NTRS)

    Grieve, R. A. F.; Coderre, J. M.; Rupert, J.; Garvin, J. B.

    1989-01-01

    This paper presents a geometric model describing the geometry of the transient cavity of an impact crater and the subsequent collapse of its walls to form a crater filled by an interior breccia lens. The model is tested by comparing the volume of slump material calculated from known dimensional parameters with the volume of the breccia lens estimated on the basis of observational data. Results obtained from the model were found to be consistent with observational data, particularly in view of the highly sensitive nature of the model to input parameters.

  8. Application of a Multiscale Model of Tantalum Deformation at Megabar Pressures

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cavallo, R M; Park, H; Barton, N R

    A new multiscale simulation tool has been developed to model the strength of tantalum under high-pressure dynamic compression. This new model combines simulations at multiple length scales to explain macroscopic properties of materials. Previously known continuum models of material response under load have built upon a mixture of theoretical physics and experimental phenomenology. Experimental data, typically measured at static pressures, are used as a means of calibration to construct models that parameterize the material properties; e.g., yield stress, work hardening, strain-rate dependence, etc. The pressure dependence for most models enters through the shear modulus, which is used to scale themore » flow stress. When these models are applied to data taken far outside the calibrated regions of phase space (e.g., strain rate or pressure) they often diverge in their predicted behavior of material deformation. The new multiscale model, developed at Lawrence Livermore National Laboratory, starts with interatomic quantum mechanical potential and is based on the motion and multiplication of dislocations. The basis for the macroscale model is plastic deformation by phonon drag and thermally activated dislocation motion and strain hardening resulting from elastic interactions among dislocations. The dislocation density, {rho}, and dislocation velocity, {nu}, are connected to the plastic strain rate {var_epsilon}{sup p}, via Orowan's equation: {var_epsilon}{sup p} = {rho}b{nu}/M, where b is the Burger's vector, the shear magnitude associated with a dislocation, and M is the Taylor factor, which accounts for geometric effects in how slip systems accommodate the deformation. The evolution of the dislocation density and velocity is carried out in the continuum model by parameterized fits to smaller scale simulations, each informed by calculations on smaller length scales down to atomistic dimensions. We apply this new model for tantalum to two sets of experiments and

  9. Surrogate modeling of deformable joint contact using artificial neural networks.

    PubMed

    Eskinazi, Ilan; Fregly, Benjamin J

    2015-09-01

    Deformable joint contact models can be used to estimate loading conditions for cartilage-cartilage, implant-implant, human-orthotic, and foot-ground interactions. However, contact evaluations are often so expensive computationally that they can be prohibitive for simulations or optimizations requiring thousands or even millions of contact evaluations. To overcome this limitation, we developed a novel surrogate contact modeling method based on artificial neural networks (ANNs). The method uses special sampling techniques to gather input-output data points from an original (slow) contact model in multiple domains of input space, where each domain represents a different physical situation likely to be encountered. For each contact force and torque output by the original contact model, a multi-layer feed-forward ANN is defined, trained, and incorporated into a surrogate contact model. As an evaluation problem, we created an ANN-based surrogate contact model of an artificial tibiofemoral joint using over 75,000 evaluations of a fine-grid elastic foundation (EF) contact model. The surrogate contact model computed contact forces and torques about 1000 times faster than a less accurate coarse grid EF contact model. Furthermore, the surrogate contact model was seven times more accurate than the coarse grid EF contact model within the input domain of a walking motion. For larger input domains, the surrogate contact model showed the expected trend of increasing error with increasing domain size. In addition, the surrogate contact model was able to identify out-of-contact situations with high accuracy. Computational contact models created using our proposed ANN approach may remove an important computational bottleneck from musculoskeletal simulations or optimizations incorporating deformable joint contact models. Copyright © 2015 IPEM. Published by Elsevier Ltd. All rights reserved.

  10. Surrogate Modeling of Deformable Joint Contact using Artificial Neural Networks

    PubMed Central

    Eskinazi, Ilan; Fregly, Benjamin J.

    2016-01-01

    Deformable joint contact models can be used to estimate loading conditions for cartilage-cartilage, implant-implant, human-orthotic, and foot-ground interactions. However, contact evaluations are often so expensive computationally that they can be prohibitive for simulations or optimizations requiring thousands or even millions of contact evaluations. To overcome this limitation, we developed a novel surrogate contact modeling method based on artificial neural networks (ANNs). The method uses special sampling techniques to gather input-output data points from an original (slow) contact model in multiple domains of input space, where each domain represents a different physical situation likely to be encountered. For each contact force and torque output by the original contact model, a multi-layer feed-forward ANN is defined, trained, and incorporated into a surrogate contact model. As an evaluation problem, we created an ANN-based surrogate contact model of an artificial tibiofemoral joint using over 75,000 evaluations of a fine-grid elastic foundation (EF) contact model. The surrogate contact model computed contact forces and torques about 1000 times faster than a less accurate coarse grid EF contact model. Furthermore, the surrogate contact model was seven times more accurate than the coarse grid EF contact model within the input domain of a walking motion. For larger input domains, the surrogate contact model showed the expected trend of increasing error with increasing domain size. In addition, the surrogate contact model was able to identify out-of-contact situations with high accuracy. Computational contact models created using our proposed ANN approach may remove an important computational bottleneck from musculoskeletal simulations or optimizations incorporating deformable joint contact models. PMID:26220591

  11. Improving Models for Coseismic And Postseismic Deformation from the 2002 Denali, Alaska Earthquake

    NASA Astrophysics Data System (ADS)

    Harper, H.; Freymueller, J. T.

    2016-12-01

    Given the multi-decadal temporal scale of postseismic deformation, predictions of previous models for postseismic deformation resulting from the 2002 Denali Fault earthquake (M 7.9) do not agree with longer-term observations. In revising the past postseismic models with what is now over a decade of data, the first step is revisiting coseismic displacements and slip distribution of the earthquake. Advances in processing allow us to better constrain coseismic displacement estimates, which affect slip distribution predictions in modeling. Additionally, an updated slip model structure from a homogeneous model to a layered model rectifies previous inconsistencies between coseismic and postseismic models. Previous studies have shown that two primary processes contribute to postseismic deformation: afterslip, which decays with a short time constant; and viscoelastic relaxation, which decays with a longer time constant. We fit continuous postseismic GPS time series with three different relaxation models: 1) logarithmic decay + exponential decay, 2) log + exp + exp, and 3) log + log + exp. A grid search is used to minimize total model WRSS, and we find optimal relaxation times of: 1) 0.125 years (log) and 21.67 years (exp); 2) 0.14 years (log), 0.68 years (exp), and 28.33 years (exp); 3) 0.055 years (log), 14.44 years (log), and 22.22 years (exp). While there is not a one-to-one correspondence between a particular decay constant and a mechanism, the optimization of these constants allows us to model the future timeseries and constrain the contribution of different postseismic processes.

  12. An experimentally validated model for geometrically nonlinear plucking-based frequency up-conversion in energy harvesting

    NASA Astrophysics Data System (ADS)

    Kathpalia, B.; Tan, D.; Stern, I.; Erturk, A.

    2018-01-01

    It is well known that plucking-based frequency up-conversion can enhance the power output in piezoelectric energy harvesting by enabling cyclic free vibration at the fundamental bending mode of the harvester even for very low excitation frequencies. In this work, we present a geometrically nonlinear plucking-based framework for frequency up-conversion in piezoelectric energy harvesting under quasistatic excitations associated with low-frequency stimuli such as walking and similar rigid body motions. Axial shortening of the plectrum is essential to enable plucking excitation, which requires a nonlinear framework relating the plectrum parameters (e.g. overlap length between the plectrum and harvester) to the overall electrical power output. Von Kármán-type geometrically nonlinear deformation of the flexible plectrum cantilever is employed to relate the overlap length between the flexible (nonlinear) plectrum and the stiff (linear) harvester to the transverse quasistatic tip displacement of the plectrum, and thereby the tip load on the linear harvester in each plucking cycle. By combining the nonlinear plectrum mechanics and linear harvester dynamics with two-way electromechanical coupling, the electrical power output is obtained directly in terms of the overlap length. Experimental case studies and validations are presented for various overlap lengths and a set of electrical load resistance values. Further analysis results are reported regarding the combined effects of plectrum thickness and overlap length on the plucking force and harvested power output. The experimentally validated nonlinear plectrum-linear harvester framework proposed herein can be employed to design and optimize frequency up-conversion by properly choosing the plectrum parameters (geometry, material, overlap length, etc) as well as the harvester parameters.

  13. Geometric U-folds in four dimensions

    NASA Astrophysics Data System (ADS)

    Lazaroiu, C. I.; Shahbazi, C. S.

    2018-01-01

    We describe a general construction of geometric U-folds compatible with a non-trivial extension of the global formulation of four-dimensional extended supergravity on a differentiable spin manifold. The topology of geometric U-folds depends on certain flat fiber bundles which encode how supergravity fields are globally glued together. We show that smooth non-trivial U-folds of this type can exist only in theories where both the scalar and space-time manifolds have non-trivial fundamental group and in addition the scalar map of the solution is homotopically non-trivial. Consistency with string theory requires smooth geometric U-folds to be glued using subgroups of the effective discrete U-duality group, implying that the fundamental group of the scalar manifold of such solutions must be a subgroup of the latter. We construct simple examples of geometric U-folds in a generalization of the axion-dilaton model of \

  14. Modeling adsorption properties of structurally deformed metal–organic frameworks using structure–property map

    PubMed Central

    Lim, Dae-Woon; Kim, Sungjune; Harale, Aadesh; Yoon, Minyoung; Suh, Myunghyun Paik; Kim, Jihan

    2017-01-01

    Structural deformation and collapse in metal-organic frameworks (MOFs) can lead to loss of long-range order, making it a challenge to model these amorphous materials using conventional computational methods. In this work, we show that a structure–property map consisting of simulated data for crystalline MOFs can be used to indirectly obtain adsorption properties of structurally deformed MOFs. The structure–property map (with dimensions such as Henry coefficient, heat of adsorption, and pore volume) was constructed using a large data set of over 12000 crystalline MOFs from molecular simulations. By mapping the experimental data points of deformed SNU-200, MOF-5, and Ni-MOF-74 onto this structure–property map, we show that the experimentally deformed MOFs share similar adsorption properties with their nearest neighbor crystalline structures. Once the nearest neighbor crystalline MOFs for a deformed MOF are selected from a structure–property map at a specific condition, then the adsorption properties of these MOFs can be successfully transformed onto the degraded MOFs, leading to a new way to obtain properties of materials whose structural information is lost. PMID:28696307

  15. Numerical Modeling of the Deformation Behavior of Fault Bounded Lens Shaped Bodies in 2D

    NASA Astrophysics Data System (ADS)

    van der Zee, W.; Urai, J. L.

    2001-12-01

    Fault zones cause dramatic discontinuous changes in mechanical properties. The early stages of evolution of fault zones are important for its long-term behavior. We consider faults which develop from deformation bands or pre-existing joints which are the initially unconnected discontinuities. With further deformation, these coalesce into a connected network, and develop into a 'mature' fault gouge. When segments are not coplanar, soft linkage or bends in the fault plane (releasing and restraining bends, fault bounded lens-shaped bodies etc) necessarily occurs. Further movement causes additional deformation, and the fault zone has a strongly variable thickness. Here, we present the results of detailed fieldwork combined with numerical modeling on the deformation of fault bounded lens-shaped bodies in the fault zone. Detailed study of a number of lenses in the field shows that the lens is invariably more deformed than the surrounding material. This observation can be explained in several ways. In one end member most of the deformation in the future lens occurs before full coalescence of the slip planes and the formation of the lens. The other end member is that the slip planes coalesce before plastic deformation of the lens is occurring. The internal deformation of the lens occurs after the lens is formed, due to the redistributed stresses in the structure. If this is the case, then lens shaped bodies can be always expected to deform preferentially. Finite element models were used to investigate the shear behavior of a planar fault with a lens shaped body or a sinus-shaped asperity. In a sensitivity analysis, we consider different lens shapes and fault friction coefficients. Results show that 1) during slip, the asperity shears off to form a lens shaped body 2) lens interior deforms more than the surroundings, due to the redistribution of stresses 3) important parameters in this system are the length-thickness ratio of the lens and the fault friction coefficient 4

  16. Geodetic Measurements and Mechanical Models of Cyclic Deformation at Okmok Volcano, Alaska

    NASA Astrophysics Data System (ADS)

    Feigl, K.; Masterlark, T.; Lu, Z.; Ohlendorf, S. J.; Thurber, C. H.; Sigmundsson, F.

    2009-12-01

    The 1997 and 2008 eruptions of Okmok volcano, Alaska, provide a rare opportunity for conducting a rheological experiment to unravel the complex processes associated with magma migration, storage, and eruption in an active volcano. In this experiment, the magma flux during the eruption provides the “impulse” and the subsequent, transient deformation, the “response”. By simulating the impulse, measuring the response, and interpreting the constitutive relations between the two, one can infer the rheology. Okmok is an excellent natural laboratory for such an experiment because a complete cycle of deformation has been monitored using geodetic and seismic means, including: (a) geodetic time series from Interferometric Synthetic Aperture Radar (InSAR) and the Global Positioning System (GPS), (b) earthquake locations; and (c) seismic tomography. We are developing quantitative models using the Finite Element Method (FEM) to simulate the timing and location of the observed seismicity and deformation by accounting for: (a) the geometry and loading of the magma chamber and lava flow, (b) the spatial distribution of material properties; and (c) the constitutive (rheological) relations between stress and strain. Here, we test the hypothesis that the deformation following the 1997 eruption did not reach a steady state before the eruption in 2008. To do so, we iteratively confront the FEM models with the InSAR measurements using the General Inversion of Phase Technique (GIPhT). This approach models the InSAR phase data directly, without unwrapping, as developed, validated, and applied by Feigl and Thurber [Geophys. J. Int., 2009]. By minimizing a cost function that quantifies the misfit between observed and modeled values in terms of “wrapped” phase (with values ranging from -1/2 to +1/2 cycles), GIPhT can estimate parameters in a geophysical model. By avoiding the pitfalls of phase-unwrapping approaches, GIPhT allows the analysis, interpretation and modeling of more

  17. A finite deformation viscoelastic-viscoplastic constitutive model for self-healing materials

    NASA Astrophysics Data System (ADS)

    Shahsavari, H.; Naghdabadi, R.; Baghani, M.; Sohrabpour, S.

    2016-12-01

    In this paper, employing the Hencky strain, viscoelastic-viscoplastic response of self-healing materials is investigated. Considering the irreversible thermodynamics and using the effective configuration in the Continuum Damage-Healing Mechanics (CDHM), a phenomenological finite strain viscoelastic-viscoplastic constitutive model is presented. Considering finite viscoelastic and viscoplastic deformations, total deformation gradient is multiplicatively decomposed into viscoelastic and viscoplastic parts. Due to mathematical advantages and physical meaning of Hencky strain, this measure of strain is employed in the constitutive model development. In this regard, defining the damage and healing variables and employing the strain equivalence hypothesis, the strain tensor is determined in the effective configuration. Satisfying the Clausius-Duhem inequality, the evolution equations are introduced for the viscoelastic and viscoplastic strains. The damage and healing variables also evolve according to two different prescribed functions. To employ the proposed model in different loading conditions, the model is discretized in the semi-implicit form. Material parameters of the model are identified employing experimental tests on asphalt mixes available in the literature. Finally, capability of the model is demonstrated comparing the model predictions in the creep-recovery and repeated creep-recovery with the experimental results available in the literature and a good agreement between predicted and test results is revealed.

  18. A simplified constitutive model for predicting shape memory polymers deformation behavior

    NASA Astrophysics Data System (ADS)

    Li, Yunxin; Guo, Siu-Siu; He, Yuhao; Liu, Zishun

    2015-12-01

    Shape memory polymers (SMPs) can keep a temporary shape after pre-deformation at a higher temperature and subsequent cooling. When they are reheated, their original shapes can be recovered. Such special characteristics of SMPs make them widely used in aerospace structures, biomedical devices, functional textiles and other devices. Increasing usefulness of SMPs motivates us to further understand their thermomechanical properties and deformation behavior, of which the development of appropriate constitutive models for SMPs is imperative. There is much work in literatures that address constitutive models of the thermo-mechanical coupling in SMPs. However, due to their complex forms, it is difficult to apply these constitutive models in the real world. In this paper, a three-element model with simple form is proposed to investigate the thermo-mechanical small strain (within 10%) behavior of polyurethane under uniaxial tension. Two different cases of heated recovery are considered: (1) unconstrained free strain recovery and (2) stress recovery under full constraint at a strain level fixed during low temperature unloading. To validate the model, simulated and predicted results are compared with Tobushi's experimental results and good agreement can be observed.

  19. Geometrical interpretation for the outer SU(3) outer multiplicity label

    NASA Technical Reports Server (NTRS)

    Draayer, Jerry P.; Troltenier, D.

    1995-01-01

    A geometrical interpretation for the outer multiplicity rho that occurs in a reduction of the product of two SU(3) representations, (lambda(sub pi), mu(sub pi)) x (lambda(sub nu), mu(sub nu)) approaches sigma(sub rho)(lambda, mu)(sub rho), is introduced. This coupling of proton (pi) and neutron (nu) representations arises, for example, in both boson and fermion descriptions of heavy deformed nuclei. Attributing a geometry to the coupling raises the possibility of introducing a simple interaction that provides a physically meaningful way for distinguishing multiple occurrences of (lambda, mu) values that can arise in such products.

  20. Evaluation of deformable image registration and a motion model in CT images with limited features.

    PubMed

    Liu, F; Hu, Y; Zhang, Q; Kincaid, R; Goodman, K A; Mageras, G S

    2012-05-07

    Deformable image registration (DIR) is increasingly used in radiotherapy applications and provides the basis for a previously described model of patient-specific respiratory motion. We examine the accuracy of a DIR algorithm and a motion model with respiration-correlated CT (RCCT) images of software phantom with known displacement fields, physical deformable abdominal phantom with implanted fiducials in the liver and small liver structures in patient images. The motion model is derived from a principal component analysis that relates volumetric deformations with the motion of the diaphragm or fiducials in the RCCT. Patient data analysis compares DIR with rigid registration as ground truth: the mean ± standard deviation 3D discrepancy of liver structure centroid positions is 2.0 ± 2.2 mm. DIR discrepancy in the software phantom is 3.8 ± 2.0 mm in lung and 3.7 ± 1.8 mm in abdomen; discrepancies near the chest wall are larger than indicated by image feature matching. Marker's 3D discrepancy in the physical phantom is 3.6 ± 2.8 mm. The results indicate that visible features in the images are important for guiding the DIR algorithm. Motion model accuracy is comparable to DIR, indicating that two principal components are sufficient to describe DIR-derived deformation in these datasets.