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Sample records for humic acid-sorbed phenanthrene

  1. Isolation of Soil Bacteria Adapted To Degrade Humic Acid-Sorbed Phenanthrene

    PubMed Central

    Vacca, D. J.; Bleam, W. F.; Hickey, W. J.

    2005-01-01

    The goal of these studies was to determine how sorption by humic acids affected the bioavailability of polynuclear aromatic hydrocarbons (PAHs) to PAH-degrading microbes. Micellar solutions of humic acid were used as sorbents, and phenanthrene was used as a model PAH. Enrichments from PAH-contaminated soils established with nonsorbed phenanthrene yielded a total of 25 different isolates representing a diversity of bacterial phylotypes. In contrast, only three strains of Burkholderia spp. and one strain each of Delftia sp. and Sphingomonas sp. were isolated from enrichments with humic acid-sorbed phenanthrene (HASP). Using [14C]phenanthrene as a radiotracer, we verified that only HASP isolates were capable of mineralizing HASP, a phenotype hence termed “competence.” Competence was an all-or-nothing phenotype: noncompetent strains showed no detectable phenanthrene mineralization in HASP cultures, but levels of phenanthrene mineralization effected by competent strains in HASP and NSP cultures were not significantly different. Levels and rates of phenanthrene mineralization exceeded those predicted to be supported solely by the metabolism of phenanthrene in the aqueous phase of HASP cultures. Thus, competent strains were able to directly access phenanthrene sorbed by the humic acids and did not rely on desorption for substrate uptake. To the best of our knowledge, this is the first report of (i) a selective interaction between aerobic bacteria and humic acid molecules and (ii) differential bioavailability to bacteria of PAHs sorbed to a natural biogeopolymer. PMID:16000791

  2. The influence of mechanochemical modification on prevention of toxic ability of humic acids towards phenanthrene in aquatic environment

    NASA Astrophysics Data System (ADS)

    Shekhovtsova, N. S.; Maltseva, E. V.; Glyzina, T. S.; Ovchinnikova, I. S.

    2015-11-01

    The aim of the research work is to quantify interaction between phenanthrene with modified humic acids in aquatic environment. The changes in the structure and properties of humic acids after modifications were studied with 1H NMR spectroscopy and potentiometric titration methods. Our research demonstrates that the application of thiourea as a modified agent increases the binding capacity of humic acids towards phenanthrene.

  3. Effect of solution chemistry on the extent of binding of phenanthrene by a soil humic acid: A comparison of dissolved and clay bound humic

    SciTech Connect

    Jones, K.D.; Tiller, C.L.

    1999-02-15

    The effect of pH, ionic strength, and cation in solution on the binding of phenanthrene by a soil humic acid in the aqueous phase was determined using fluorescence quenching. The phenanthrene binding coefficient with the dissolved soil humic, K{sub oc}, decreased with increasing ionic strength and solution cation valence. At low values of ionic strength, K{sub oc} values for this soil humic acid increased with increasing pH. For this humic sample, the experimental results were consistent with a conformational model of the humic substance in aqueous solution where, depending on solution conditions, some parts of the humic structure may be more open to allow increased PAH access to attachment sites. After sorption onto clays, supernatant solutions of the unadsorbed humic fraction yielded lower K{sub oc} values than the original bulk humic acid, suggesting that the humic substance was fractionating during its sorption onto the clays. Additionally, the extent of phenanthrene binding with the adsorbed humic fraction was lower than the results determined for the bulk humic acid prior to adsorption. The conformation of the humic substance when sorbed onto the inorganic surface appears to be affecting the level of phenanthrene binding by the humic acid.

  4. Effect of humic fractions and clay on biodegradation of phenanthrene by a Pseudomonas fluorescens strain isolated from soil

    SciTech Connect

    Ortega-Calvo, J.J.; Saiz-Jimenez, C.

    1998-08-01

    The mineralization of phenanthrene in pure cultures of a Pseudomonas fluorescens strain, isolated from soil, was measured in the presence of soil humic fractions and montmorillonite. Humic acid and clay, either separately or in combination, shortened the acclimation phase. A higher mineralization rate was measured in treatments with humic acid at 100 {micro}g/ml. Humic acid at 10 {micro}g/ml stimulated the transformation only in the presence of 10 g of clay per liter. The authors suggest that sorption of phenanthrene to these soil components may result in a higher concentration of substrate in the vicinity of the bacterial cells and therefore may increase its bioavailability.

  5. Use of humic acids derived from peat and lignite as phenanthrene sorbents

    NASA Astrophysics Data System (ADS)

    Sofikitis, Elias; Giannouli, Andriana; Kalaitzidis, Stavros; Christanis, Kimon; Karapanagioti, Hrissi K.; Papanicolaou, Cassiani

    2015-04-01

    A broad range of materials is being applied for environmental remediation of water, among them sorbents such as humic acids. Being natural substances, the extraction and purification of humic acids might be cheaper than the production of synthetic sorbents. Having higher absorbing capacity than most of the sorbents used to date, humic acids have a competitive advantage against commonly used sorbents such as active charcoals and biochar. Humic acids are "complex colloidal super-mixtures" that are characterized by their functional groups. Therefore, composition and molecular formula can vary depending on the properties of the parent material. The aim of this project was (a) to study the sorption capacity of humic acids derived from peat and lignite samples picked up from deposits spread throughout Greece and (b) to compare the results with these of the parent materials. This comparison provides an insight to which matrix samples are suitable for further chemical treatment for the isolation of humic acids to be used as sorbents. The selected model pollutant was phenanthrene, which is a PAH that consists of three fused benzene rings. Humic acids were extracted according to the methodology proposed by the IHSS, slightly modified, in order to fit better to the properties of organic sediments. Sorption experiments were conducted by mixing 0.004 g of the sorbent (peat or lignite or humic acid) with aqueous solutions of phenanthrene at different concentrations of 30, 50, 100, 300, and 500 μg/L. The results show that phenanthrene sorption is higher for the humic acid than for the original lignite and peat samples. The original samples display higher sorption at the lower phenanthere solutions (30 μg/L; Kd ranges from 15,000 to 47,000 L/kg) than at the higher one (500 μg/L; Kd ranges from 4,100 to 13,000 L/Kg) suggesting non-linear sorption. The humic acids display mainly linear isotherms with Kd ranges from 6,600 to 120,000 L/kg. Concerning the suitability of the studied

  6. Hydroxypropyl-β-cyclodextrin extractability and bioavailability of phenanthrene in humin and humic acid fractions from different soils and sediments.

    PubMed

    Gao, Huipeng; Ma, Jing; Xu, Li; Jia, Lingyun

    2014-01-01

    Organic matter (OM) plays a vital role in controlling polycyclic aromatic hydrocarbon (PAH) bioavailability in soils and sediments. In this study, both a hydroxypropyl-β-cyclodextrin (HPCD) extraction test and a biodegradation test were performed to evaluate the bioavailability of phenanthrene in seven different bulk soil/sediment samples and two OM components (humin fractions and humic acid (HA) fractions) separated from these soils/sediments. Results showed that both the extent of HPCD-extractable phenanthrene and the extent of biodegradable phenanthrene in humin fraction were lower than those in the respective HA fraction and source soil/sediment, demonstrating the limited bioavailability of phenanthrene in the humin fraction. For the source soils/sediments and the humin fractions, significant inverse relationships were observed between the sorption capacities for phenanthrene and the amounts of HPCD-extractable or biodegradable phenanthrene (p < 0.05), suggesting the importance of the sorption capacity in affecting desorption and biodegradation of phenanthrene. Strong linear relationships were observed between the amount of HPCD-extractable phenanthrene and the amount degraded in both the bulk soils/sediments and the humin fractions, with both slopes close to 1. On the other hand, in the case of phenanthrene contained in HA, a poor relationship was observed between the amount of phenanthrene extracted by HPCD and the amount degraded, with the former being much less than the latter. The results revealed the importance of humin fraction in affecting the bioavailability of phenanthrene in the bulk soils/sediments, which would deepen our understanding of the organic matter fractions in affecting desorption and biodegradation of organic pollutants and provide theoretical support for remediation and risk assessment of contaminated soils and sediments. PMID:24705921

  7. Phenanthrene

    Integrated Risk Information System (IRIS)

    Phenanthrene ; CASRN 85 - 01 - 8 Human health assessment information on a chemical substance is included in the IRIS database only after a comprehensive review of toxicity data , as outlined in the IRIS assessment development process . Sections I ( Health Hazard Assessments for Noncarcinogenic Effec

  8. Sorption of phenanthrene by humic acid-coated nanosized TiO2 and ZnO.

    PubMed

    Yang, Kun; Xing, Baoshan

    2009-03-15

    Phenanthrene sorption by nano-TiO2 and nano-ZnO particles was enhanced significantly by coated humic acids (HAs), implying that additional toxicity can be potentially given to these nanooxides by adsorbed HOCs once released to the environment. Phenanthrene isotherms of adsorbed HA on nano-TiO2 and nano-ZnO were more nonlinear than that of their respective bulk HA. Both HA conformation changes and fractionation were observed upon HA adsorption on nano-TiO2 and nano-ZnO, which further affected phenanthrene sorption. Nano-TiO2 and nano-ZnO interacted with differentfunctional groups of HA (i.e., phenolic OH with nano-TiO2, while COOH with nano-ZnO), leading to different conformations of adsorbed HA. Interaction of HA phenolic OH with nano-TiO2 increased the pi-polarity/polarizability of adsorbed HA and, consequently, its phenanthrene adsorption affinity and isotherm nonlinearity. Interactions of COOH groups on HA aromatic rings with nano-ZnO would also increase the pi-polarity/polarizability of adsorbed HA and its phenanthrene adsorption affinity, whereas interactions of COOH groups on HA aliphatic chains with nano-ZnO would make the adsorbed HA be in a more condensed state with lower partitioning affinity. Increase in adsorption and decrease in partitioning were responsible for the more nonlinear phenanthrene isotherms of adsorbed HA than bulk HA. PMID:19368181

  9. Influences of humic acid on the bioavailability of phenanthrene and alkyl phenanthrenes to early life stages of marine medaka (Oryzias melastigma).

    PubMed

    Liu, Yangzhi; Yang, Chenghu; Cheng, Pakkin; He, Xiaojing; Zhu, Yaxian; Zhang, Yong

    2016-03-01

    The influences of humic acid (HA) on the environmental behavior and bioavailability of parent polycyclic aromatic hydrocarbons (PAHs) and alkyl PAHs were investigated and compared using the early life stages of marine medaka (Oryzias melastigma, O. melastigma). It was demonstrated that the binding affinity of parent phenanthrene (PHE) with HA was smaller than that of 3-methyl phenanthrene (3-MP) and 9-ethyl phenanthrene (9-EP). Furthermore, the bioaccumulation of the three PAHs and the levels of lipid peroxidation (LPO) were calculated to study the changes in bioavailability of PAHs in presence of HA. The results indicated that the addition of HA significantly decreased the bioaccumulation and toxicity of PAHs by decreasing free PAHs concentrations. The bioavailable fractions of HA-bound PAHs in bioaccumulation (α) and toxicity (β) were evaluated, indicating that the HA-bound 3-MP and 9-EP show higher bioavailability in bioaccumulation and lower bioavailability in toxicity relative to those of PHE. The β/α values were less than 1 for all PAH treatment groups containing HA, suggesting that the fraction of HA-bound PAHs contributing to bioaccumulation was higher than that of HA-bound PAHs inducing toxic effect. In addition, we proposed that the free PAHs generated by desorption from HA in the cell were toxic by showing that the β/α ratio values are correlated with the log KOW values (p = 0.007 and R(2) = 0.8355). Thus, oil spill risk assessments should consider both alkyl PAHs and the factors that influence the bioavailability and toxicity of PAHs in the natural aquatic environments. PMID:26735166

  10. Effects of ionic strength on the binding of phenanthrene and pyrene to humic substances: three-stage variation model.

    PubMed

    Lee, Chon-Lin; Kuo, Li-Jung; Wang, Huei-Ling; Hsieh, Ping-Chieh

    2003-10-01

    This study compared the effects of ionic strength on the binding constants (K(doc)) of selected polycyclic aromatic hydrocarbons (PAHs) (phenanthrene and pyrene) and a terrestrial humic acid (Leonardite Humic Acid) in different electrolyte solutions (KCl, KBr, MgCl(2) and MgSO(4)). Distinct trends were found in K(doc) variation depending upon the range of ionic strength resulting from added electrolytes. These trends demonstrated similar shapes for all the systems studied, while degree of variation increased with hydrophobicity of the PAHs. Furthermore, different types of electrolytes had different effects on the interactions between humic acid (HA) and the PAHs. These differences were primarily caused by types of cation, not anion. To describe the complicated effects of ionic strength on K(doc), we developed a three-stage variation model that encompasses increasing and decreasing trends and plateaus in K(doc) associated with ionic strength, as well as the mechanisms behind these trends, including the variation of HA structure configuration, HA aggregation and the salting-out effect. This model illustrated the importance of sufficient experimental data when interpreting the influence of ionic strength on the trends in K(doc) variation. PMID:12946908

  11. Effect of Cosolutes on the Sorption of Phenanthrene onto Mineral Surface of River Sediments and Kaolinite

    PubMed Central

    2014-01-01

    Sorption of phenanthrene onto the natural sediment with low organic carbon content (OC%), organic-free sediment, and kaolinite was investigated through isotherm experiments. Effects of cosolutes (pyrene, 4-n-nonyphenol (NP), and humic acid (HA)) on phenanthrene sorption were also studied by comparing apparent solid-water distribution coefficients (Kdapp) of phenanthrene. Two addition sequences, including “cosolute added prior to phenanthrene” and “cosolute and phenanthrene added simultaneously,” were adopted. The Freundlich model fits phenanthrene sorption on all 3 sorbents well. The sorption coefficients on these sorbents were similar, suggesting that mineral surface plays an important role in the sorption of hydrophobic organic contaminants on low OC% sediments. Cosolutes could affect phenanthrene sorption on the sorbents, which depended on their properties, concentrations, and addition sequences. Pyrene inhibited phenanthrene sorption. Sorbed NP inhibited phenanthrene sorption at low levels and promoted sorption at high levels. Similar to NP, effect of HA on phenanthrene sorption onto the natural sediment depended on its concentrations, whereas, for the organic-free sediment and kaolinite, preloading of HA at high levels led to an enhancement in phenanthrene Kdapp while no obvious effect was observed at low HA levels; dissolved HA could inhibit phenanthrene sorption on the two sorbents. PMID:25147865

  12. Anaerobic degradation of phenanthrene and pyrene in mangrove sediment.

    PubMed

    Chang, Bea-Ven; Chang, I T; Yuan, S Y

    2008-02-01

    This study investigated the anaerobic degradation of the polycyclic aromatic hydrocarbons (PAHs) phenanthrene and pyrene in mangrove sediment from Taiwan. The anaerobic degradation of PAH was enhanced by the addition of acetate, lactate, pyruvate, sodium chloride, cellulose, or zero-valent iron. However, it was inhibited by the addition of humic acid, di-(2-ethylhexyl) phthalate (DEHP), nonylphenol, or heavy metals. Of the microorganism strains isolated from the sediment samples, we found that strain MSA3 (Clostridium pascui), expressed the best ability to biodegrade PAH. The inoculation of sediment with the strain MSA3 could enhance PAH degradation. PMID:18188486

  13. Phenanthrene Biodegradation in Freshwater Environments

    PubMed Central

    Sherrill, T. W.; Sayler, G. S.

    1980-01-01

    Phenanthrene, a low-molecular-weight polycyclic aromatic hydrocarbon, was incubated with water samples from various reservoir systems in Tennessee to evaluate the potential for significant polycyclic aromatic hydrocarbon degradation by the indigenous microbial populations. Biodegradation was assessed by comparison of total polycyclic aromatic hydrocarbon substrate recovery in degradation flasks relative to sterile control flasks. During 1977 field studies, the mean phenanthrene biodegradation was approximately 80% after a 4-week incubation. Within a given habitat, 45% of the total variability in phenanthrene biodegradation was attributable to the physical, chemical, and microbiological site characteristics examined. Polycyclic aromatic hydrocarbon degradation was directly related to the historical environmental pollution of the sampling sites examined, the length of biodegradation assessment, temperature, and the molecular size of the polycyclic aromatic hydrocarbon substrate. PMID:16345487

  14. Ba{sub 2}phenanthrene is the main component in the Ba-doped phenanthrene superconductor

    SciTech Connect

    Yan, Xun-Wang; Huang, Zhongbing; Lin, Hai-Qing

    2014-12-14

    We have systematically investigated the crystal structure of Ba-doped phenanthrene with various Ba doping levels by the first-principles calculations combined with the X-ray diffraction (XRD) spectra simulations. Although the experimental stoichiometry ratio of Ba atom and phenanthrene molecule is 1.5:1, the simulated XRD spectra, space group symmetry and optimized lattice parameters of Ba{sub 1.5}phenanthrene are not consistent with the experimental ones, while the results for Ba{sub 2}phenanthrene are in good agreement with the measurements. The strength difference of a few XRD peaks can be explained by the existence of pristine phenanthrene. Our findings suggest that instead of uniform Ba{sub 1.5}phenanthrene, there coexist Ba{sub 2}phenanthrene and undoped phenanthrene in the superconducting sample. The electronic calculations indicate that Ba{sub 2}phenanthrene is a semiconductor with a small energy gap less than 0.05 eV.

  15. Photocatalytic degradation of phenanthrene on soil surfaces in the presence of nanometer anatase TiO2 under UV-light.

    PubMed

    Gu, Jiali; Dong, Dianbo; Kong, Lingxue; Zheng, Yong; Li, Xiaojun

    2012-01-01

    The effect of nanometer anatase TiO2 was investigated on the photocatalytic degradation of phenanthrene on soil surfaces under a variety of conditions. After being spiked with phenanthrene, soil samples loaded with different amounts of TiO2 (0 wt.%, 1 wt.%, 2 wt.%, 3 wt.%, and 4 wt.%) were exposed to UV-light irradiation for 25 hr. The results indicated that the photocatalytic degradation of phenanthrene followed the pseudo first-order kinetics. TiO2 significantly accelerated the degradation of phenanthrene with the half-life reduced from 45.90 to 31.36 hr for TiO2 loading of 0 wt.% and 4 wt.%, respectively. In addition, the effects of H2O2, light intensity and humic acid on the degradation of phenanthrene were investigated. The degradation of phenanthrene increased with the concentration of H2O2, light intensity and the concentration of humic acids. It has been demonstrated that the photocatalytic method in the presence of nanometer anatase TiO2 was a very promising technology for the treatments of soil polluted with organic substances in the future. PMID:23534208

  16. Correlation between biological and physical availabilities of phenanthrene in soils and soil humin in aging experiments

    SciTech Connect

    White, J.C.; Hunter, M.; Nam, K.; Pignatello, J.J.; Alexander, M.

    1999-08-01

    The bioavailability of an organic compound in a soil or sediment commonly declines with the soil-chemical contact time (aging). A series of parallel desorption and bioavailability experiments was carried out on phenanthrene previously aged up to {approximately}100 d in Mount Pleasant silt loam (Mt. Pleasant, NY, USA) or Pahokee peat soil to determine as a function of the aging period the degree of correlation between the reduction in bioavailability and the rate and extent of desorption and the influence of soil organic matter composition on availability. The mineralization of phenanthrene by two bacteria and the uptake of phenanthrene by earthworms showed expected declines with aging. Likewise, the rate of phenanthrene desorption in the absence of organisms decreased with aging. The decline in initial rate of mineralization or desorption was nearly an order of magnitude after 50 to 60 d of aging. Plots of normalized rates of mineralization or desorption practically coincided. Similarly, plots of normalized fraction mineralized or fraction desorbed during an arbitrary period gave comparable slopes. The partial removal of organic matter from the peat by extraction with dilute NaOH to leave the humin fraction reduced the biodegradation of phenanthrene aged for 38 and 63 d as compared to the nonextracted peat, but the effect disappeared at longer incubation times. The rate of desorption from samples of peat previously extracted with NaOH or Na{sub 4}P{sub 2}O{sub 7} declined with aging and, for a given aging period, was significantly slower than from nonextracted peat. This work shows that the reduction in bioavailability of phenanthrene over time in soil is directly correlated with reduction of its physical availability due to desorption limitations. In addition, this study shows that removal of extractable humic substances leads to a decline in the rate of desorption and in the bioavailability of the substrate.

  17. Phenanthrene removal from aqueous solutions using well-characterized, raw, chemically treated, and charred malt spent rootlets, a food industry by-product.

    PubMed

    Valili, Styliani; Siavalas, George; Karapanagioti, Hrissi K; Manariotis, Ioannis D; Christanis, Kimon

    2013-10-15

    Malt spent rootlets (MSR) are biomaterials produced in big quantities by beer industry as by-products. A sustainable solution is required for their management. In the present study, MSR are examined as sorbents of a hydrophobic organic compound, phenanthrene, from aqueous solutions. Raw MSR sorb phenanthrene but their sorptive properties are not competitive with the respective properties of commercial sorbents (e.g., activated carbons). Organic petrography is used as a tool to characterize MSR after treatment in order to produce an effective sorbent for phenanthrene. Chemical and thermal (at low temperature under nitrogen atmosphere) treatments of MSR did not result in highly effective sorbents. Based on organic petrography characterization, the pores of the treated materials were filled with humic colloids. When pyrolysis at 800 °C was used to treat MSR, a sorbent with new and empty pores was produced. Phenanthrene sorption capacity was 2 orders of magnitude higher for the pyrolized MSR than for raw MSR. PMID:23764506

  18. Interactions among buffelgrass, phenanthrene and phenanthrene-degrading bacteria in gnotobiotic microcosms.

    PubMed

    Robert, Francoise M; Sun, Wenhao H; Toma, Marisa; Jones, Ryan K; Tang, Chung-Shih

    2008-07-15

    An experiment was undertaken in gnotobiotic microcosms to determine the role of buffelgrass (Cenchrus ciliaris) and a phenanthrene-degrading bacterium (strain PM600) in the degradation of phenanthrene. The Gram-negative bacterium was identified as a Sphingomonas sp. by 16S rRNA gene sequence analysis and as S. paucimobilis by biochemical tests (API 20 NE strips). Its yellow pigment corresponded to nostoxanthin and its cellular fatty acids were typical of the genus Sphingomonas. Moreover, it was devoid of lipopolysaccharides. Strain PM600 was tested for growth on mineral medium supplemented with No. 2 diesel, hexadecane, mineral oil, pristane, phenanthrene, and pyrene as single carbon sources. It was capable of utilizing phenanthrene only. In the gnotobiotic microcosms silica sand was either or not supplemented with 150 mg of phenanthrene kg(-1) sand, inoculated with strain PM600, and planted to sterile young seedlings of buffelgrass. After 28 days, 67% of the reduction of the phenanthrene concentration was assigned to degradation by the bacterium and ca. 20% to abiotic factors. No statistically significant effect of the young buffelgrass was found. In the absence of phenanthrene, the bacterial population significantly increased in the rhizosphere of buffelgrass. However, in the presence of buffelgrass and phenanthrene, the bacterial population preferentially responded to phenanthrene. The growth of buffelgrass was severely curtailed by phenanthrene in the absence of the bacterium. However, strain PM600 effectively protected buffelgrass against the phytotoxicity of phenanthrene. PMID:18569317

  19. Natural phenanthrenes and their biological activity.

    PubMed

    Kovács, Adriána; Vasas, Andrea; Hohmann, Judit

    2008-03-01

    The aim of this review is to survey the various naturally occurring phenanthrene compounds that have been isolated from different plants. Only one review has previously been published on this topic. Gorham (1989) reviewed the structures, biosynthesis, separations and spectroscopy of stilbenes and phenanthrenes. The present study furnishes an overview of the hydroxy or/and methoxy-substituted 9,10-dihydro/phenanthrenes, methylated, prenylated and other monomeric derivatives, dimeric and trimeric phenanthrenes and their biological activities. A fairly large number of phenanthrenes have been reported from higher plants, mainly in the Orchidaceae family, in the species Dendrobium, Bulbophyllum, Eria, Maxillaria, Bletilla, Coelogyna, Cymbidium, Ephemerantha and Epidendrum. A few phenanthrenes have been found in the Hepaticae class and Dioscoreaceae, Combretaceae and Betulaceae families. Their distribution correlates strongly with the taxonomic divisions. These plants have often been used in traditional medicine, and phenanthrenes have therefore been studied for their cytotoxicity, antimicrobial, spasmolytic, anti-inflammatory, antiplatelet aggregation, antiallergic activities and phytotoxicity. On the basis of 120 references, this review covers the phytochemistry and pharmacology of phenanthrenes, describing 252 compounds. This contribution stems from our work on the medicinal plant Tamus communis. PMID:18243254

  20. Estuarine ecology of phenanthrene-degrading bacteria

    NASA Astrophysics Data System (ADS)

    Guerin, William F.; Jones, Galen E.

    1989-08-01

    Phenanthrene degrading bacteria were ubiquitously distributed in waters and sediments of the Great Bay Estuary, NH, as determined using a 14C-phenanthrene mineralization assay. Similar activities were observed in water samples collected in March and June when these were incubated at 18 °C even though ambient water temperatures were 1-4 °C and 10-22 °C, respectively. This observation indicated the constant presence of a mesophilic phenanthrene-degrading bacterial population in the estuary. Among water samples, the highest biodegradation activities were associated with samples collected downstream from a dredging operation which introduced high concentrations of coal tar PAH (polycyclic aromatic hydrocarbons) into the Cocheco River, and in areas receiving PAH from pleasure and commercial boating activities. Mid-estuarine maxima in biodegradation activity during both sampling trips suggested adaptation of the microbial flora to the salinities prevailing in the low turnover, high residence time portion of the Estuary at the time of sampling. Despite the hydrophobicity of phenanthrene, no correlation between biodegradation rates and particulate matter concentrations were observed. Similarly, concentrations of nutrients and dissolved and particulate organic matter correlated poorly with biodegradation rates. Better agreements between 14C-phenanthrene mineralization potentials and plate counts on a phenanthrene/toluene agar (PTA) medium were observed. Phenanthrene biodegradative activities and numbers of culturable bacteria growing on PTA were governed by the degree of previous exposure to PAH.

  1. Fluorescence Characterization of Dissolved Organic Matter Isolates from Sediments and the Association with Phenanthrene Binding Affinity

    NASA Astrophysics Data System (ADS)

    Hur, Jin; Lee, Bo-Mi; Shin, Kyung-Hoon

    2014-05-01

    In this study, selected spectroscopic characteristics of sediment organic matter (SOM) were compared and discussed with respect to their different isolation methods, the source discrimination capabilities, and the association with the extent of phenanthrene binding. A total of 16 sediments were collected from three categorized locations including a costal lake, industrial areas, and the upper streams, each of which is likely influenced by the organic sources of algal production, industrial effluent, and terrestrial input, respectively. The spectroscopic properties related to aromatic structures and terrestrial humic acids were more pronounced for alkaline extractable organic matter (AEOM) isolates than for the SOM isolates based on water soluble extracts and porewater. The three categorized sampling locations were the most differentiated in the AEOM isolates, suggesting AEOM may be the most representative SOM isolates in describing the chemical properties and the organic sources of SOM. Parallel factor analysis (PARAFAC) based on fluorescence excitation-emission matrix (EEM) showed that a combination of four fluorescent groups could represent all the fluorescence features of SOM. The three categorized sampling locations were well discriminated by the percent distributions of terrestrial and microbial humic-like fluorescent groups of the AEOM isolates. The relative distribution of terrestrial humic-like fluorophores was highly correlated with the extent of phenanthrene binding (r=0.676; p<0.01), suggesting that the presence of terrestrial humic acids in SOM may contribute to the enhancement of binding with hydrophobic organic contaminants in sediments. Principal component analysis (PCA) further demonstrated that the extent of SOM's binding affinity might be affected by the degree of biological transformation in SOM as well as the abundance of aromatic carbon structures.

  2. Humic preperations from Russian lignites

    SciTech Connect

    Rodeh, V.V.; Ryzhkov, O.G.

    1994-12-31

    THe objective of this work was to study lignites as the precursor materials to humic substances. Lignites contain humic substances primarily as humic acids. Their extraction requires the processing of coals with alkali.

  3. Adsorption of phenanthrene on natural snow.

    PubMed

    Domine, Florent; Cincinelli, Alessandra; Bonnaud, Elodie; Martellini, Tania; Picaud, Sylvain

    2007-09-01

    The snowpack is a reservoir for semivolatile organic compounds (SVOCs) and, in particular, for persistent organic pollutants (POPs), which are sequestered in winter and released to the atmosphere or hydrosphere in the spring. Modeling these processes usually assumes that SVOCs are incorporated into the snowpack by adsorption to snow surfaces, but this has never been proven because the specific surface area (SSA) of snow has never been measured together with snow composition. Here we expose natural snow to phenanthrene vapors (one of the more volatile POPs) and measure for the first time both the SSA and the chemical composition of the snow. The results are consistent with an adsorption equilibrium. The measured Henry's law constant is H(Phen)(T) = 2.88 x 10(22) exp(-10660/7) Pa m2 mol(-1), with Tin Kelvin. The adsorption enthalpy is delta H(ads) = -89 +/- 18 kJ mol(-1). We also perform molecular dynamics calculations of phenanthrene adsorption to ice and obtain AHads = -85 +/- 8 kJ mol(-1), close to the experimental value. Results are applied to the adsorption of phenanthrene to the Arctic and subarctic snowpacks. The subarctic snowpack, with a low snow area index (SAI = 1000), is a negligible reservoir of phenanthrene, butthe colder Arctic snowpack, with SAI = 2500, sequesters most of the phenanthrene present in the (snow + boundary layer) system. PMID:17937278

  4. New phenanthrene derivatives from maxillaria densa(1)

    PubMed

    Estrada; Toscano; Mata

    1999-08-01

    Two new phenanthrene derivatives, 2,5-dihydroxy-3, 4-dimethoxyphenanthrene (1) and 9,10-dihydro-2,5-dihydroxy-3, 4-dimethoxyphenanthrene (2), were isolated from an extract prepared from the whole plant of the orchid Maxillaria densa with spasmolytic activity. In addition, four known compounds, namely 2,7-dihydroxy-3, 4-dimethoxyphenanthrene, 9,10-dihydro-2,7-dihydroxy-3, 4-dimethoxyphenanthrene (3), 2,5-dihydroxy-3,4, 9-trimethoxyphe-nanthrene, and 2,7-dihydroxy-3,4, 9-trimethoxyphenanthrene, were obtained. The structures of the isolated compounds were elucidated by spectroscopic methods. In the case of phenanthrene derivatives 1 and 3, the structures were unambiguously assigned by X-ray analysis. PMID:10479332

  5. Homogeneous and heterogeneous reactions of phenanthrene with ozone

    NASA Astrophysics Data System (ADS)

    Zhang, Yang; Yang, Bo; Meng, Junwang; Gao, Shaokai; Dong, Xinyu; Shu, Jinian

    2010-02-01

    The reactions of gas-phase phenanthrene and suspended phenanthrene particles with ozone were conducted in a 200l chamber. The secondary organic aerosol formation was observed in the reaction of gas-phase phenanthrene with ozone and simultaneously the size distribution of the secondary organic aerosol was monitored with a scanning mobility particle sizer during the formation process. The particulate ozonation products from both reactions were analyzed with a vacuum ultraviolet photoionization aerosol time-of-flight mass spectrometer. 2,2'-Diformylbiphenyl was identified as the dominant product in both homogeneous and heterogeneous reactions of phenanthrene with ozone. GC/MS analysis of ozonation products of phenanthrene in glacial acetic acid was carried out for assigning time-of-flight mass spectra of reaction products formed in the homogeneous and heterogeneous reactions of phenanthrene with ozone.

  6. Metabolism of phenanthrene by the white rot fungus Pleurotus ostreatus.

    PubMed Central

    Bezalel, L; Hadar, Y; Fu, P P; Freeman, J P; Cerniglia, C E

    1996-01-01

    The white rot fungus Pleurotus ostreatus, grown for 11 days in basidiomycetes rich medium containing [14C] phenanthrene, metabolized 94% of the phenanthrene added. Of the total radioactivity, 3% was oxidized to CO2. Approximately 52% of phenanthrene was metabolized to trans-9,10-dihydroxy-9,10-dihydrophenanthrene (phenanthrene trans-9,10-dihydrodiol) (28%), 2,2'-diphenic acid (17%), and unidentified metabolites (7%). Nonextractable metabolites accounted for 35% of the total radioactivity. The metabolites were extracted with ethyl acetate, separated by reversed-phase high-performance liquid chromatography, and characterized by 1H nuclear magnetic resonance, mass spectrometry, and UV spectroscopy analyses. 18O2-labeling experiments indicated that one atom of oxygen was incorporated into the phenanthrene trans-9,10-dihydrodiol. Circular dichroism spectra of the phenanthrene trans-9,10-dihydrodiol indicated that the absolute configuration of the predominant enantiomer was 9R,10R, which is different from that of the principal enantiomer produced by Phanerochaete chrysosporium. Significantly less phenanthrene trans-9,10-dihydrodiol was observed in incubations with the cytochrome P-450 inhibitor SKF 525-A (77% decrease), 1-aminobenzotriazole (83% decrease), or fluoxetine (63% decrease). These experiments with cytochrome P-450 inhibitors and 18O2 labeling and the formation of phenanthrene trans-9R,10R-dihydrodiol as the predominant metabolite suggest that P. ostreatus initially oxidizes phenanthrene stereoselectively by a cytochrome P-450 monoxygenase and that this is followed by epoxide hydrolase-catalyzed hydration reactions. PMID:8779594

  7. Enhanced transport of phenanthrene and 1-naphthol by colloidal graphene oxide nanoparticles in saturated soil.

    PubMed

    Qi, Zhichong; Hou, Lei; Zhu, Dongqiang; Ji, Rong; Chen, Wei

    2014-09-01

    With the increasing production and use of graphene oxide, the environmental implications of this new carbonaceous nanomaterial have received much attention. In this study, we found that the presence of low concentrations of graphene oxide nanoparticles (GONPs) significantly enhanced the transport of 1-naphthol in a saturated soil, but affected the transport of phenanthrene to a much smaller extent. The much stronger transport-enhancement effect on 1-naphthol was due to the significant desorption hysteresis (both thermodynamically irreversible adsorption and slow desorption kinetics) of GONP-adsorbed 1-naphthol, likely stemmed from the specific polar interactions (e.g., H-bonding) between 1-naphthol and GONPs. Increasing ionic strength or the presence of Cu(II) ion (a complexing cation) generally increased the transport-enhancement capability of GONPs, mainly by increasing the aggregation of GONPs and thus, sequestering adsorbed contaminant molecules. Interestingly, modifying GONPs with Suwannee River humic acid or sodium dodecyl sulfate had little or essentially no effect on the transport-enhancement capability of GONPs, in contrast with the previously reported profound effects of humic acids and surfactants on the transport-enhancement capability of C60 nanoparticles. Overall, the findings indicate that GONPs in the aquatic environment may serve as an effective carrier for certain organic compounds that can interact with GONPs through strong polar interactions. PMID:25099876

  8. Ambient aquatic life water quality criteria for phenanthrene. Draft report

    SciTech Connect

    Not Available

    1988-08-16

    The document is a draft for aquatic life criteria for phenanthrene. Data concerning the acute toxicity of phenanthrene to freshwater animals are available for 9 species. Mean acute values for ten species of saltwater animals are specified as well. The document is for public review and comment to assist in producing the criteria document in final form.

  9. OXIDATIVE DEGRADATION OF PHENANTHRENE BY THE LIGNINOLYTIC FUNGUS PHANEROCHAETE CHRYSOSPORIUM

    EPA Science Inventory

    The ligninolytic fungus Phanerochaete chrysosporium oxidized phenanthrene and phenanthrene-9,10-quinone (PQ) at their C-9 and C-10 positions to give a ring-fission product, 2,2'-diphenic acid (DPA), which was identified in chromatographic and isotope dilution experiments. PA form...

  10. Evaluating phenanthrene sorption on various wood chars

    USGS Publications Warehouse

    James, G.; Sabatini, D.A.; Chiou, C.T.; Rutherford, D.; Scott, A.C.; Karapanagioti, H.K.

    2005-01-01

    A certain amount of wood char or soot in a soil or sediment sample may cause the sorption of organic compounds to deviate significantly from the linear partitioning commonly observed with soil organic matter (SOM). Laboratory produced and field wood chars have been obtained and analyzed for their sorption isotherms of a model solute (phenanthrene) from water solution. The uptake capacities and nonlinear sorption effects with the laboratory wood chars are similar to those with the field wood chars. For phenanthrene aqueous concentrations of 1 ??gl-1, the organic carbon-normalized sorption coefficients (log Koc) ranging from 5.0 to 6.4 for field chars and 5.4-7.3 for laboratory wood chars, which is consistent with literature values (5.6-7.1). Data with artificial chars suggest that the variation in sorption potential can be attributed to heating temperature and starting material, and both the quantity and heterogeneity of surface-area impacts the sorption capacity. These results thus help to corroborate and explain the range of log Koc values reported in previous research for aquifer materials containing wood chars. ?? 2004 Elsevier Ltd. All rights reserved.

  11. Factors affecting sequestration and bioavailability of phenanthrene in soils

    SciTech Connect

    White, J.C.; Kelsey, J.W.; Hatzinger, P.B.; Alexander, M.

    1997-10-01

    A study was conducted to determine factors affecting the sequestration and changes in bioavailability as phenanthrene persists in soils. Phenanthrene became sequestered in seven soils differing appreciably in organic matter and clay content as measured by earthworm uptake, bacterial mineralization, or extractability. Phenanthrene also became sequestered as it aged in soil aggregates of various sizes as measured by decline in availability to a bacterium, a mild extractant, or both. Wetting and drying a soil during aging reduced the amount of phenanthrene recovered by a mild extractant and the rate and extent of bacterial mineralization of the hydrocarbon. After biodegradation of phenanthrene added to the soil, more of the compound remained if it had been aged than if it had not been aged. Wetting and drying the soil during aging further increased the amount of phenanthrene remaining after biodegradation. The rate and extent of bacterial mineralization of phenanthrene were less in leached than in unleached soil. Aging/sequestration is thus markedly affected by soil properties and environmental factors.

  12. Biodegradation of phenanthrene and analysis of degrading cultures in the presence of a model organo-mineral matrix and of a simulated NAPL phase.

    PubMed

    Cavalca, Lucia; Rao, Maria A; Bernasconi, Silvana; Colombo, Milena; Andreoni, Vincenza; Gianfreda, Liliana

    2008-02-01

    Two mixed bacterial cultures (C(B-BT) and C(I-AT)) degraded phenanthrene when it was: (i) in the presence of either hexadecane as a non aqueous phase liquid or a montmorillonite-Al(OH)x-humic acid complex as a model organo-mineral matrix; (ii) sorbed to the complex, either alone or in the presence of hexadecane. The cultures had different kinetic behaviours towards phenanthrene with or without hexadecane. The degradation of Phe alone as well as that of Phe in hexadecane ended in 8 and 15 days with C(B-BT) and C(I-AT) cultures, respectively. Hexadecane increased Phe bioavailability for C(I-AT) bacteria which degraded Phe according to first-order kinetics. The same effect was observed for C(B-BT) bacteria, but with an initial 2 days lag phase and in accordance with zero-order kinetics. The presence of hexadecane did not affect the degradation of phenanthrene sorbed and aged on the complex by C(I-AT )culture. This capability was exhibited also after experimental aging of 30 days. The dynamics of the bacterial community composition was investigated through PCR-DGGE (denaturing gradient gel electrophoresis) of 16S rRNA gene fragments. Individual bands changed their intensity during the incubation time, implying that particular microbe's relative abundance changed according to the culture conditions. Isolation of phenanthrene and/or hexadecane degraders was in accord with cultivation-independent data. Growth-dependent changes in the cell surface hydrophobicity of the two cultures and of the isolates suggested that modulation of cell surface hydrophobicity probably played an important role for an efficient phenanthrene assimilation/uptake. PMID:17372704

  13. Phenanthrene derivatives from the orchid Coelogyne cristata.

    PubMed

    Majumder, P L; Sen, S; Majumder, S

    2001-10-01

    Coeloginanthridin, a 9,10-dihydrophenanthrene derivative, and coeloginanthrin, the corresponding phenanthrene analogue, were isolated from the orchid Coelogyne cristata which earlier afforded coelogin (1a) and coeloginin (1b). The structures of coeloginanthridin and coeloginanthrin were established as 3,5,7-trihydroxy-1,2-dimethoxy-9,10-dihydrophenanthrene (2a) and 3,5,7-trihydroxy-1,2-dimethoxyphenanthrene (2c), respectively, from spectral and chemical evidence including the conversion of coeloginanthridin triacetate (2b) to coeloginanthrin triacetate (2d) by dehydrogenation with DDQ. In the light of earlier reports on structurally similar compounds, 2a and 2c may have biological activities of phytoalexins and endogenous plant growth regulators. PMID:11576602

  14. Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium

    PubMed Central

    Kato, Hiromi; Ogawa, Natsumi; Ohtsubo, Yoshiyuki; Oshima, Kenshiro; Toyoda, Atsushi; Mori, Hiroshi; Nagata, Yuji; Kurokawa, Ken; Hattori, Masahira; Fujiyama, Asao

    2015-01-01

    A phenanthrene degrader, Mycobacterium sp. EPa45, was isolated from a phenanthrene-degrading consortium. Here, we report the complete genome sequence of EPa45, which has a 6.2-Mb single circular chromosome. We propose a phenanthrene degradation pathway in EPa45 based on the complete genome sequence. PMID:26184940

  15. Toxic photoproducts of phenanthrene and anthracene in sunlight

    SciTech Connect

    Duxbury, C.L.; McConkey, B.J.; Mallakin, A.; Dixon, D.G.; Greenberg, B.M.

    1995-12-31

    Phenanthrene and anthracene, two of the most prevalent PAHs, undergo significant increases in toxicity on exposure to sunlight. Over a period of several days exposure to light, the toxicity of an aqueous solution of phenanthrene or anthracene increased dramatically. This increase in toxicity is largely due to the primary products formed by these two PAHs due to light exposure. These compounds are more toxic than the parent compounds at equimolar concentrations. Although anthracene is a potent photosensitizer, phenanthrene did not exhibit a significant increase in toxicity due to photosensitization. Photo-oxidation was the principal cause of photoinduced toxicity, with 9,10-phenanthrenequinone being the primary product. This compound is more water soluble than phenanthrene increasing its bioavailability. In addition, mixtures of phenanthrene and 9,10-phenanthrenequinone exhibited toxicity similar to the quinone added alone. This was shown by joint toxicity testing using Lemna gibba and Daphnia magna. These two organisms are currently being used in the lab to further test individual oxidized products of anthracene and phenanthrene that occur as a result of exposure to sunlight.

  16. Variability of standard artificial soils: Physico-chemical properties and phenanthrene desorption measured by means of supercritical fluid extraction.

    PubMed

    Bielská, Lucie; Hovorková, Ivana; Komprdová, Klára; Hofman, Jakub

    2012-04-01

    The study is focused on artificial soil which is supposed to be a standardized "soil like" medium. We compared physico-chemical properties and extractability of Phenanthrene from 25 artificial soils prepared according to OECD standardized procedures at different laboratories. A substantial range of soil properties was found, also for parameters which should be standardized because they have an important influence on the bioavailability of pollutants (e.g. total organic carbon ranged from 1.4 to 6.1%). The extractability of Phe was measured by supercritical fluid extraction (SFE) at harsh and mild conditions. Highly variable Phe extractability from different soils (3-89%) was observed. The extractability was strongly related (R(2)=0.87) to total organic carbon content, 0.1-2mm particle size, and humic/fulvic acid ratio in the following multiple regression model: SFE (%)=1.35*sand (%)-0.77*TOC (%)2+0.27*HA/FA. PMID:22325424

  17. Use of bromodeoxyuridine immunocapture to identify psychrotolerant phenanthrene-degrading bacteria in phenanthrene-enriched polluted Baltic Sea sediments

    SciTech Connect

    Edlund, A.; Jansson, J.

    2008-05-01

    The aim of this study was to enrich and identify psychrotolerant phenanthrenedegrading bacteria from polluted Baltic Sea sediments. Polyaromatic hydrocarbon (PAH)-contaminated sediments were spiked with phenanthrene and incubated for 2 months in the presence of bromodeoxyuridine that is incorporated into the DNA of replicating cells. The bromodeoxyuridine-incorporated DNA was extracted by immunocapture and analyzed by terminal-restriction fragment length polymorphism and 16S rRNA gene cloning and sequencing to identify bacterial populations that were growing. In addition, degradation genes were quantified in the bromodeoxyuridine-incorporated DNA by real-time PCR. Phenanthrene concentrations decreased after 2 months of incubation in the phenanthrene-enriched sediments and this reduction correlated to increases in copy numbers of xylE and phnAc dioxygenase genes. Representatives of Exiguobacterium, Schewanella,Methylomonas, Pseudomonas, Bacteroides and an uncultured Deltaproteobacterium and a Gammaproteobacterium dominated the growing community in the phenanthrene spiked sediments. Isolates that were closely related to three of these bacteria (two pseudomonads and an Exiguobacterium sp.) could reduce phenanthrene concentrations in pure cultures and they all harbored phnAc dioxygenase genes. These results confirm that this combination of culture-based and molecular approaches was useful for identification of actively growing bacterial species with a high potential for phenanthrene degradation.

  18. CHLORINATION OF AQUATIC HUMIC SUBSTANCES

    EPA Science Inventory

    This research program was initiated with the overall objective of increasing our understanding of the chemical structures of aquatic humic material and their behavior during chemical oxidation in particular with chlorine. Experimental methods were devised for the isolation of hum...

  19. Sorption of phenanthrene on to soil fractions in the presence of Triton X-100.

    PubMed

    Zhang, Guangzhi; Sun, Weiling; Hu, Hao; Lu, Xuemei; Ni, Jinren

    2012-01-01

    The objective of this study was to evaluate the effect of soil fractions on surfactant-enhanced soil remediation. A soil sample was separated into humic acid (HA), humin (HM), base-extracted soil (BE) and mineral fraction through solution extraction. The sorption of phenanthrene (PHE) on to individual soil fractions in the presence of a nonionic surfactant, Triton X-100 (TX100) at two concentrations, was studied. The results showed that HA had the highest affinity for both PHE and TX100. The HM and BE presented a high sorption capacity for PHE but a low capacity for TX100, while mineral presented a low sorption capacity for PHE and a high sorption capacity for TX100. The sorption of PHE on different soil fractions was greatly influenced by the presence of TX100. With TX100 present in solution, the distribution parameters K(f) and K(d) of all the sorbents decreased, with the exception of the mineral fraction at the lower TX100 initial concentration. The sorption of PHE on to HA and the mineral fraction was particularly influenced by TX100, which is because of the corresponding high TX100 sorption capacity of HA and the mineral fraction. PMID:22519118

  20. Relative role of eukaryotic and prokaryotic microorganisms in phenanthrene transformation in coastal sediments

    SciTech Connect

    MacGillivray, A.R.; Shiaris, M.P. )

    1994-04-01

    The relative role of eukaryotic versus prokaryotic microorganisms in phenanthrene transformation was measured in slurries of coastal sediment by two different approaches: detection of marker metabolites and use of selective inhibitors on phenanthrene biotransformation. Phenanthrene biotransformation was measured by polar metabolite formation and CO[sub 2] evolution from [9-[sup 14]C]phenanthrene. Both yeasts and bacteria transformed phenanthrene in slurries of coastal sediment. Two products of phenanthrene oxidation by fungi, phenanthrene trans-3,4-dihydrodiol and 3-phenanthrol, were produced in yeast-inoculated sterile sediment. However, only products of phenanthrene oxidation typical of bacterial transformation, 1-hydroxy-2-naphthoic acid and phenanthrene cis-3,4-dihydrodiol, were isolated from slurries of coastal sediment with natural microbial populations. Phenanthrene trans-dihydrodiols or other products of fungal oxidation of phenanthrene were not detected in the slurry containing a natural microbial population. A predominant role for bacterial transformation of phenanthrene was also suggested from selective inhibitor experiments. Addition of streptomycin to slurries, at a concentration which suppressed bacterial viable counts and rates of [methyl-[sup 3]H]thymidine uptake, completely inhibited phenanthrene transformation. Treatment with colchicine, at a concentration which suppressed yeast viable counts, depressed phenanthrene transformation by 40%, and this was likely due to nontarget inhibition of bacterial activity. The relative contribution of eukaryotic microorganisms to phenanthrene transformation in inoculated sterile sediment was estimated to be less than 3% of the total activity. We conclude that the predominant degraders of phenanthrene in muddy coastal sediments are bacteria and not eukaryotic microorganisms. 35 refs., 2 figs., 1 tab.

  1. Sorption of polar and nonpolar aromatic compounds to two humic acids with varied structural heterogeneity

    SciTech Connect

    Sun, H.Y.; Zhu, D.Q.; Mao, J.D.

    2008-12-15

    The major objective of the present study was to evaluate the correlation between structural nature of humic acids (HAs) and sorption affinity of organic compounds with varied polarity. We compared the sorption behavior of three aromatic compounds-nonpolar phenanthrene (PHEN) and 1,2,4,5-tetrachlorobenzene (TeCB) and highly polar 2,4-dichlorophenol (DCP)-to a solid-phase coal humic acid (CHA) and a soil humic acid (SHA) suspended in aqueous solution. The structural nature of HAs was characterized using elemental analysis, ultraviolet absorbance, diffusive reflectance Fourier-transform infrared, and solid-state C-13 nuclear magnetic resonance. The two tested HAs have very different structural properties: CHA consists primarily of poly(methylene)-rich aliphatics with high aromatic content and some COO/N-C=O but low polarity, while SHA consists of young materials of lignin, carbohydrates, and peptides with high polarity. In response to the structural heterogeneity of HAs, sorption of nonpolar and more hydrophobic solutes (PHEN, TeCB) to CHA is much greater than that to SHA because of the predominance of hydrophobic effects; however, disparities in sorption affinity between the two HAs become smaller for polar and less hydrophobic DCP because of the major role played by polar interactions. The influence of pH on the sorption of different solutes to the two HAs was also discussed. The results of the present work highlight the importance of structural heterogeneity of both solutes and HAs in the sorption process.

  2. Multiple degradation pathways of phenanthrene by Stenotrophomonas maltophilia C6

    PubMed Central

    Gao, Shumei; Seo, Jong-Su; Wang, Jun; Keum, Young-Soo; Li, Jianqiang; Li, Qing X.

    2013-01-01

    Stenotrophomonas maltophilia strain C6, capable of utilizing phenanthrene as a sole source of carbon and energy, was isolated from creosote-contaminated sites at Hilo, Hawaii. Twenty-two metabolites of phenanthrene, covering from dihydrodiol to protocatechuic acid, were isolated and characterized. Phenanthrene was degraded via an initial dioxygenation on 1,2-, 3,4-, and 9,10-C, where the 3,4-dioxygenation and subsequent metabolisms were most dominant. The metabolic pathways were further branched by ortho- and meta-cleavage of phenanthrenediols to produce 1-hydroxy-2-naphthoic acid, 2-hydroxy-1-naphthoic acid, and naphthalene-1,2-dicarboxylic acid. These intermediates were then transformed to naphthalene-1,2-diol. 1-Hydroxy-2-naphthoic acid was also degraded via a direct ring cleavage. Naphthalene-1,2-diol underwent primarily ortho-cleavage to produce trans-2-carboxycinnamic acid and then to form phthalic acid, 4,5-dihydroxyphthalic acid and protocatechuic acid. Accumulation of salicylic acid in prolonged incubation indicated that a limited extent of meta-cleavage of naphthalene-1, 2-diol also occurred. This is the first study of detailed phenanthrene metabolic pathways by Stenotrophomonas maltophilia. PMID:23539472

  3. Rhizoremediation of phenanthrene and pyrene contaminated soil using wheat.

    PubMed

    Shahsavari, Esmaeil; Adetutu, Eric M; Taha, Mohamed; Ball, Andrew S

    2015-05-15

    Rhizoremediation, the use of the plant rhizosphere and associated microorganisms represents a promising method for the clean up of soils contaminated with polycyclic aromatic hydrocarbons (PAHs) including phenanthrene and pyrene, two model PAHs. Although numerous studies have been published reporting the degradation of phenanthrene and pyrene, very few evaluate the microbial basis of the rhizoremediation process through the application of molecular tools. The aim of this study was to investigate the effect of wheat on the degradation of two model PAHs (alone or in combination) and also on soil bacterial, fungal and nidA gene (i.e. a key gene in the degradation of pyrene) communities. The addition of wheat plants led to a significant enhancement in the degradation of both phenanthrene and pyrene. In pyrene-contaminated soils, the degradation rate increased from 15% (65 mg/kg) and 18% (90 mg/kg) in unplanted soils to 65% (280 mg/kg) and 70% (350 mg/kg) in planted treatments while phenanthrene reduction was enhanced from 97% (394 mg/kg) and 87% (392 mg/kg) for unplanted soils to 100% (406 mg/kg) and 98% (441 mg/kg) in the presence of wheat. PCR-DGGE results showed that the plant root let to some changes in the bacterial and fungal communities; these variations did not reflect any change in hydrocarbon-degrading communities. However, plate counting, traditional MPN and MPN-qPCR of nidA gene revealed that the wheat rhizosphere led to an increase in the total microbial abundance including PAH degrading organisms and these increased activities resulted in enhanced degradation of phenanthrene and pyrene. This clearer insight into the mechanisms underpinning PAH degradation will enable better application of this environmentally friendly technique. PMID:25819570

  4. Colonization on Root Surface by a Phenanthrene-Degrading Endophytic Bacterium and Its Application for Reducing Plant Phenanthrene Contamination

    PubMed Central

    Liu, Juan; Liu, Shuang; Sun, Kai; Sheng, Yuehui; Gu, Yujun; Gao, Yanzheng

    2014-01-01

    A phenanthrene-degrading endophytic bacterium, Pn2, was isolated from Alopecurus aequalis Sobol grown in soils contaminated with polycyclic aromatic hydrocarbons (PAHs). Based on morphology, physiological characteristics and the 16S rRNA gene sequence, it was identified as Massilia sp. Strain Pn2 could degrade more than 95% of the phenanthrene (150 mg·L−1) in a minimal salts medium (MSM) within 48 hours at an initial pH of 7.0 and a temperature of 30°C. Pn2 could grow well on the MSM plates with a series of other PAHs, including naphthalene, acenaphthene, anthracene and pyrene, and degrade them to different degrees. Pn2 could also colonize the root surface of ryegrass (Lolium multiflorum Lam), invade its internal root tissues and translocate into the plant shoot. When treated with the endophyte Pn2 under hydroponic growth conditions with 2 mg·L−1 of phenanthrene in the Hoagland solution, the phenanthrene concentrations in ryegrass roots and shoots were reduced by 54% and 57%, respectively, compared with the endophyte-free treatment. Strain Pn2 could be a novel and useful bacterial resource for eliminating plant PAH contamination in polluted environments by degrading the PAHs inside plants. Furthermore, we provide new perspectives on the control of the plant uptake of PAHs via endophytic bacteria. PMID:25247301

  5. HUMIC SUBSTANCES AND CONTAMINANT TRANSPORT

    EPA Science Inventory

    Humic substances are widely distributed in the environment, occurring in soils and waters. hey are the products of microbial degradation of dead vegetable and animal matter. hey account for the major portion of dissolved organic matter. hey are water soluble and have the ability ...

  6. Enhanced desorption of humin-bound phenanthrene by attached phenanthrene-degrading bacteria.

    PubMed

    Zhang, Yinping; Wang, Fang; Bian, Yongrong; Kengara, Fredrick Orori; Gu, Chenggang; Zhao, Qiguo; Jiang, Xin

    2012-11-01

    The objective of the study was to test the hypothesis that the attachment of polycyclic aromatic hydrocarbons (PAHs)-degrading bacteria can promote desorption of PAHs from humin, thereby increasing their bioavailability. Biodegradation of humin-bound phenanthrene (PHE) - a model compound for PAHs - was investigated using two PHE-degrading bacteria, Sphingobium sp. PHE3 and Micrococcus sp. PHE9, respectively. Sorption data of PHE to humin fitted well into the modified Freundlich equation. Further, a new sorption band appeared at 1262cm(-1), demonstrating intermolecular interactions between PHE and humin. Interestingly, approximately 65.3% of humin-bound PHE was degraded by both strains, although only about 17.8% of PHE could be desorbed from humin by Tenax extraction. Furthermore, both strains grew well in mineral medium and also attached to humin surfaces for substrate uptake. It is proposed that the attached bacteria could possibly consume PHE on the humin via interactions between bacterial surfaces and humin, thereby overcoming the low PHE bioavailability and resulting in enhanced degradation. PMID:22940304

  7. [Impact of dissolved organic matter on plant uptake of phenanthrene and its mechanisms].

    PubMed

    Zhan, Xin-hua; Zhou, Li-xiang; Wan, Yin-jing; Jiang, Ting-hui

    2006-09-01

    Hydroponic assays were conducted to investigate the influence of dissolved organic matter on uptake of phenanthrene by wheat as well as its mechanisms. The results showed that, under hydroponic condition, phenanthrene impairment of plant growth occurred with wheat growth inhibited rate of 18.01%. The impairment would be greatly enhanced in the presence of dissolved organic matter (DOM) derived from pig manure, and the inhibited rate increased to 24.38%. Wheat could uptake and accumulate phenanthrene in the nutrient solution, which could be escalated by DOM, as indicated by wheat root bioconcentration factor being increased to 37.63 L x kg(-1) in the presence of DOM from 2.84 L x kg(-1) in the absence of DOM. At the same time, DOM could facilitate phenanthrene translocation from plant roots to the upper. As a result, the pH value of nutrient solution could increase by more than 1 unit when the co-existence of DOM and phenanthrene occurred in solution, suggesting that H+ -phenanthrene cotransport system is involved in the uptake of phenanthrene by plants. A synergism was also found between wheat uptakes of phenanthrene and inorganic nutrients, Moreover, DOM accelerated markedly the synergism. It is concluded that DOM affects the uptake of phenanthrene by plants and the environmental behaviors of phenanthrene. PMID:17117650

  8. Identification of metabolites from phenanthrene oxidation by phenoloxidases and dioxygenases of Polyporus sp. S133.

    PubMed

    Hadibarata, Tony; Tachibana, Sanro; Askari, Muhamad

    2011-03-01

    Phenanthrene degradation by Polyporus sp. S133, a new phenanthrene-degrading strain, was investigated in this work. The analysis of degradation was performed by calculation of the remaining phenanthrene by gas chromatography-mass spectrometry. When cells were grown in phenanthrene culture after 92 h, all but 200 and 250 mg/l of the phenanthrene had been degraded. New metabolic pathways of phenanthrene and a better understanding of the phenoloxidases and dioxygenase mechanism involved in degradation of phenanthrene were explored in this research. The mechanism of degradation was determined through identification of the several metabolites; 9,10-phenanthrenequinone, 2,2'-diphenic acid, salicylic acid, and catechol. 9,10-Oxidation and ring cleavage to give 9,10-phenanthrenequinone is the major fate of phenanthrene in ligninolytic Polyporus sp. S133. The identification of 2,2'-diphenic acid in culture extracts indicates that phenanthrene was initially attacked through dioxigenation at C9 and C10 to give cis-9,10-dihydrodiol. Dehydrogenation of phenanthrene-cis-9,10-dihydrodiol to produce the corresponding diol, followed by ortho-cleavage of the oxygenated ring, produced 2,2'-diphenic acid. Several enzymes (manganese peroxidase, lignin peroxidase, laccase, 1,2-dioxygenase, and 2,3-dioxygenase) produced by Polyporus sp. S133 was detected during the incubation. The highest level of activity was shown at 92 h of culture. PMID:21464602

  9. Extracellular polymeric substances facilitate the biosorption of phenanthrene on cyanobacteria Microcystis aeruginosa.

    PubMed

    Bai, Leilei; Xu, Huacheng; Wang, Changhui; Deng, Jiancai; Jiang, Helong

    2016-11-01

    Phytoplankton-derived extracellular polymeric substances (EPS) are of vital importance for the biogeochemical cycles of hydrophobic organic pollutants in lake ecosystems. In this study, roles of loosely-bound EPS (LB-EPS) and tightly bound EPS (TB-EPS) in biosorption of phenanthrene (PHE) on a typical cyanobacteria Microcystis aeruginosa were investigated. The results showed that the biosorption of PHE on M. aeruginosa cell varied lasted 24 h, while the binding of PHE to LB-EPS and TB-EPS reached equilibrium within less than 2 h. The equilibrium biosorption capacities of M. aeruginosa cell, LB-EPS and TB-EPS were 6.78, 12.31, and 9.47 μg mg(-1), respectively, indicating that the binding of PHE to EPS was a considerable process involved in biosorption. Fluorescence quenching titration revealed that increasing temperature induced more binding sites in EPS for PHE and the binding process was driven by electrostatic force and hydrophobic interactions. Interestingly, dynamic and static quenching processes occurred simultaneously for the binding of PHE to protein-like substances in EPS, whereas the binding of PHE to humic-like substances belonged to static quenching. The relatively higher contents of proteins in LB-EPS produced a stronger binding capacity of PHE. Overall, the interactions between hydrophobic organic pollutants and cyanobacterial EPS are favorable to the bioaccumulation of hydrophobic organic pollutants in cyanobacteria and facilitate the regulatory function of cyanobacterial biomass as a biological pump. PMID:27497347

  10. Numerical taxonomy of phenanthrene-degrading bacteria isolated from the Chesapeake Bay.

    PubMed Central

    West, P A; Okpokwasili, G C; Brayton, P R; Grimes, D J; Colwell, R R

    1984-01-01

    Phenanthrene-degrading bacteria were isolated from Chesapeake Bay samples by the use of a solid medium which had been overlaid with an ethanol solution of phenanthrene before inoculation. Eighteen representative strains of phenanthrene-degrading bacteria with 21 type and reference bacteria were examined for 123 characteristics representing physiological, biochemical, and nutritional properties. Relationships between strains were computed with several similarity coefficients. The phenogram constructed by unweighted-pair-group arithmetic average linkage and use of the simple Jaccard (SJ) coefficient was used to identify seven phena. Phenanthrene-degrading bacteria were identified as Vibrio parahaemolyticus and Vibrio fluvialis by their clustering with type and reference strains. Several phenanthrene-degrading bacteria resembled Enterobacteriaceae family members, although some Vibrio-like phenanthrene degraders could not be identified. PMID:6508314

  11. Anti-inflammatory phenanthrene derivatives from stems of Dendrobium denneanum.

    PubMed

    Lin, Yuan; Wang, Fei; Yang, Li-Juan; Chun, Ze; Bao, Jin-Ku; Zhang, Guo-Lin

    2013-11-01

    Cultivated Dendrobium denneanum has been substituted for other endangered Dendrobium species in recent years, but there have been few studies regarding either its chemical constituents or pharmacological effects. In this study, three phenanthrene glycosides, three 9,10-dihydrophenanthrenes, two 9,10-dihydrophenanthrenes glycosides, and four known phenanthrene derivatives, were isolated from the stems of D. denneanum. Their structures were elucidated on the basis of MS and NMR spectroscopic data. Ten compounds were found to inhibit nitric oxide (NO) production in lipopolysaccharide (LPS)-activated mouse macrophage RAW264.7 cells with IC50 values of 0.7-41.5 μM, and exhibited no cytotoxicity in RAW264.7, HeLa, or HepG2 cells. Additionally, it was found that 2,5-dihydroxy-4-methoxy-phenanthrene 2-O-β-d-glucopyranoside, and 5-methoxy-2,4,7,9S-tetrahydroxy-9,10-dihydrophenanthrene suppressed LPS-induced expression of inducible NO synthase (iNOS) inhibited phosphorylation of p38, JNK as well as mitogen-activated protein kinase (MAPK), and inhibitory kappa B-α (IκBα). This indicated that both compounds exert anti-inflammatory effects by inhibiting MAPKs and nuclear factor κB (NF-κB) pathways. PMID:24042064

  12. Induction of PAH degradation in a phenanthrene-degrading pseudomonad

    SciTech Connect

    Stringfellow, W.T.; Chen, S.H.; Aitken, M.D.

    1995-12-31

    Recent evidence suggests that different polycyclic aromatic hydrocarbon (PAH) substrates are metabolized by common enzymes in PAH-degrading bacteria, implying that inducers for low-molecular-weight PAH degradation may coinduce for the metabolism of higher-molecular-weight compounds. The authors have tested this hypothesis with a well-characterized PAH-degrading bacterium, Pseudomonas saccharophila P-15. Growth of P-15 on salicylate, a metabolite of phenanthrene degradation, and a known inducer for naphthalene degradation, induced the metabolism of both substrates. Several potential inducers were then tested for their effects on metabolism of the four-ring compounds pyrene and fluoranthene, neither of which is a growth substrate for P-15, but both of which can be metabolized by this organism. Incubation of P-15 in the presence of phenanthrene or salicylate induced the metabolism of pyrene and fluoranthene in resting-cell assays. Catechol, another intermediate of naphthalene and phenanthrene degradation, did not induce the metabolism of either compound and interfered with the inducing effect of salicylate. These results have implications for strategies designed to maintain PAH degradation in contaminated environments, particularly for compounds that are degraded slowly or are degraded only by nongrowth metabolism.

  13. Sublethal effects of phenanthrene, nicotine, and pinane on Daphnia pulex

    SciTech Connect

    Savino, J.F.; Tanabe, L.L. )

    1989-05-01

    Nearly 500 compounds were detected in the tissues of Great Lakes fish as compared to 8 in tissues of hatchery-reared fish. Lethal concentrations for many representative compounds were determined by testing their acute toxicity (48-hr EC50) to Daphnia pulex. However, the population growth and survival of aquatic organisms over longer time intervals are usually affected at concentrations much lower than the EC50 for a specific chemical. To develop a general relationship between acute and chronic concentrations for representative compounds detected in Great Lakes fish, the authors initiated full-life-cycle testing on D. pulex with phenanthrene, nicotine, and pinane. Growth and fecundity of daphnids was measured in 16-d tests in the laboratory. Phenanthrene and nicotine were highly toxic and pinane was moderately toxic to D. pulex in acute studies. For phenanthrene, a compound of the polycyclic aromatic hydrocarbons (PAHs) that has been associated with incomplete combustion of organic matter. For nicotine, a compound in the heterocyclic nitrogen class of chemicals that has been used as an insecticide, the EC50 was 0.24 mg/L. Cyclic alkanes, many of which are constituents of crude oil were represented by pinane for which the EC50 was 3.35 mg/L.

  14. Biostimulation as an attractive technique to reduce phenanthrene toxicity for meiofauna and bacteria in lagoon sediment.

    PubMed

    Louati, Hela; Said, Olfa Ben; Soltani, Amel; Got, Patrice; Cravo-Laureau, Cristiana; Duran, Robert; Aissa, Patricia; Pringault, Olivier; Mahmoudi, Ezzeddine

    2014-03-01

    A microcosm experiment was setup to examine (1) the effect of phenanthrene contamination on meiofauna and bacteria communities and (2) the effects of different bioremediation strategies on phenanthrene degradation and on the community structure of free-living marine nematodes. Sediments from Bizerte lagoon were contaminated with (100 mg kg(-1)) phenanthrene and effects were examined after 20 days. Biostimulation (addition of nitrogen and phosphorus fertilizer or mineral salt medium) and bioaugmentation (inoculation of a hydrocarbonoclastic bacterium) were used as bioremediation treatments. Bacterial biomass was estimated using flow cytometry. Meiofauna was counted and identified at the higher taxon level using a stereomicroscope. Nematodes, comprising approximately two thirds of total meiofauna abundance, were identified to genus or species. Phenanthrene contamination had a severe impact on bacteria and meiofauna abundances with a strong decrease of nematodes with a complete disappearance of polychaetes and copepods. Bioremediation counter balanced the toxic effects of phenanthrene since meiofauna and bacteria abundances were significantly higher (p < 0.01) than those observed in phenanthrene contamination. Up to 98 % of phenanthrene removal was observed. In response to phenanthrene contamination, the nematode species had different behavior: Daptonema fallax was eliminated in contaminated microcosms, suggesting that it is an intolerant species to phenanthrene; Neochromadora peocilosoma, Spirinia parasitifera, and Odontophora n. sp., which significantly (p < 0.05) increased in contaminated microcosms, could be considered as "opportunistic" species to phenanthrene whereas Anticoma acuminata and Calomicrolaimus honestus increased in the treatment combining biostimulation and bioaugmentation. Phenanthrene had a significant effect on meiofaunal and bacterial abundances (p < 0.05), with a strong reduction of density and change in the nematode communities

  15. Selection of nonionic surfactants in enhancing biodegradation of phenanthrene in soil

    SciTech Connect

    Jahan, K.; Ahmed, T.; Maier, W.J.

    1996-12-31

    This research addresses the influence of sub-cmc concentrations of selected commercial nonionic surfactants on the biodegradation of phenanthrene. Various types of nonionic surfactants were tested to determine their ability to enhance the availability of phenanthrene to microorganisms in soil systems. Nonionic surfactants were selected as they are known to have greater hydrocarbon solubilizing power, less toxicity to microbial populations and low foaming property. Surfactants were tested to measure their effectiveness for increasing solubility of phenanthrene, their sorption on the soil matrix, their biodegradability and also their effect on the sorption and biodegradation of phenanthrene. Batch and column studies were carried out for the biodegradation experiments. Batch isotherm experiments were conducted to characterize the sorption of surfactants and phenanthrene. Solubility enhancement of phenanthrene by the selected surfactants was mainly a micellar phenomena. Sorption of phenanthrene and the surfactants could be represented by the linear isotherm model. Sorption of phenanthrene was enhanced in the presence of surfactants. Batch and column biodegradation studies indicate that biodegradation of phenanthrene was enhanced in the presence of the surfactants. None of the surfactants were biodegraded during the timecourse of these experiments. This study indicates that surfactant selection for in-situ bioremediation of insoluble hydrocarbons will depend on a large number of factors with main emphasis on the hydrocarbon solubilizing power, low toxicity to Zn bacteria and the environment and low sorptive properties.

  16. Preparative isolation of aquatic humic substances

    USGS Publications Warehouse

    Thurman, E.M.; Malcolm, R.L.

    1981-01-01

    A useful procedure has been developed which utilizes adsorption chromatography followed by size-exclusion chromatography, hydrogen saturation by ion exchange, and lypholization to obtain low-ash aqueous humic substances. The preparative concentration of aquatic humic substances is done by multiple reconcentration procedures even though initial concentrations of aqueous humus may be less than 25 ??g/L. The procedure yields concentration factors of 25 000 times for both humic and fulvic acid in water.

  17. Isolation of humic acids from leonardite

    SciTech Connect

    Shah, S.B.; Tartamella, T.L.; Lee, S.; Kulik, C.J.

    1996-12-31

    The primary interest in humic acid is its use as an effective fertilizer. Humic substances, found commonly in low-rank coals, enhance plant growth directly through positive physiological effects and indirectly by affecting the properties of the soil. Humic acids have traditionally been defined as the dark-colored organic matter that can be extracted from soil by dilute alkali and other reagents and which is insoluble in dilute acid. This paper discusses the isolation of humic acid from leonardite using the alkaline extraction method and the subsequent characterization using elemental analysis and infrared spectroscopy techniques. In this study, yields of more than 60% were obtained.

  18. Effects of humic acids on the aggregation and sorption of nano-TiO2.

    PubMed

    Li, Yanjie; Yang, Chen; Guo, Xuetao; Dang, Zhi; Li, Xiaoqin; Zhang, Qian

    2015-01-01

    In this study, humic acids (HAs) from three sources, peat, sediment and straw, used to coat nano-TiO2 were investigated. The results indicated that HAs isolated from peat were aromatic-rich, whereas those isolated from sediment and straw were aliphatic-rich. The nano-TiO2 sedimentation experiments indicated that the presence of aromatic-rich HAs was more capable of stabilizing nano-TiO2 particles than was the presence of aliphatic-rich HAs. This result is because the deionized phenolic groups in the HAs were preferentially adsorbed on the nano-TiO2 surfaces, which generated a higher charge density on the nano-TiO2 surfaces and caused stronger repulsive forces among particles. Furthermore, the aromatic-rich TiO2-HA complexes exhibited a greater sorption capacity than the aliphatic-rich TiO2-HAs complexes and nonlinear phenanthrene sorption because of their higher affinity and the condensed state of aromatic fractions. Note that natural organic matters, such as humic acids, in aquatic environments can not only increase the stability of nanoparticles but can also influence the mobility of hydrophobic organic compounds (HOCs). PMID:24992218

  19. Pyrolysis of humic and fulvic acids

    USGS Publications Warehouse

    Wershaw, R. L.; Bohner, G.E., Jr.

    1969-01-01

    Pyrolysis of humic and fulvic acids isolated from a North Carolina soil yields a variety of aromatic, heterocyclic and straight chain organ compounds. The pyrolysis products identified by gas chromatography and mass spectrometry indicate that humic and fulvic acids have aromatic and polysaccharide structures in their molecules. ?? 1969.

  20. Equivalent weight of humic acid from peat

    USGS Publications Warehouse

    Pommer, A.M.; Breger, I.A.

    1960-01-01

    By means of discontinuous titration, the equivalent weight of humic acid isolated from a peat was found to increase from 144 to 183 between the third and fifty-second day after the humic acid was dissolved. Infra-red studies showed that the material had probably condensed with loss of carbonyl groups. ?? 1960.

  1. Evaluation of phenanthrene toxicity on earthworm (Eisenia fetida): an ecotoxicoproteomics approach.

    PubMed

    Wu, Shijin; Xu, Xian; Zhao, Shiliang; Shen, Feichao; Chen, Jianmeng

    2013-10-01

    The goal of this study was to identify promising new biomarkers of phenanthrene by identifying differentially expressed proteins in Eisenia fetida after exposure to phenanthrene. Extracts of earthworm epithelium collected at days 2, 7, 14, and 28 after phenanthrene exposure were analyzed by two dimensional electrophoresis (2-DE) and quantitative image analysis. Comparing the intensity of protein spots, 36 upregulated proteins and 45 downregulated proteins were found. Some of the downregulated and upregulated proteins were verified by MALDI-TOF/TOF-MS and database searching. Downregulated proteins in response to phenanthrene exposure were involved in glycolysis, energy metabolism, chaperones, proteolysis, protein folding and electron transport. In contrast, oxidation reduction, oxygen transport, defense systems response to pollutant, protein biosynthesis and fatty acid biosynthesis were upregulated in phenanthrene-treated E. fetida. In addition, ATP synthase b subunit, lysenin-related protein 2, lombricine kinase, glyceraldehyde 3-phosphate dehydrogenase, actinbinding protein, and extracellular globin-4 seem to be potential biomarkers since these biomarker were able to low levels (2.5 mg kg(-1)) of phenanthrene. Our study provides a functional profile of the phenanthrene-responsive proteins in earthworms. The variable levels and trends in these spots could play a potential role as novel biomarkers for monitoring the levels of phenanthrene contamination in soil ecosystems. PMID:23856470

  2. Degradation of phenanthrene by Phanerochaete chrysosporium occurs under ligninolytic as well as nonligninolytic conditions.

    PubMed Central

    Dhawale, S W; Dhawale, S S; Dean-Ross, D

    1992-01-01

    In order to delineate the roles of lignin and manganese peroxidases in the degradation of polycyclic aromatic hydrocarbons by Phanerochaete chrysosporium, the biodegradation of phenanthrene (chosen as a model for polycyclic aromatic hydrocarbons) was investigated. The disappearance of phenanthrene from the extracellular medium and mycelia was determined by using gas chromatography. The disappearance of phenanthrene from cultures of wild-type strains BKM-F1767 (ATCC 24725) and ME446 (ATCC 34541) under ligninolytic (low-nitrogen) as well as nonligninolytic (high-nitrogen) conditions was observed. The study was extended to two homokaryotic (basidiospore-derived) isolates of strain ME446. Both homokaryotic isolates, ME446-B19 (which produces lignin and manganese peroxidases only in low-nitrogen medium) and ME446-B5 (which totally lacks lignin and manganese peroxidase activities), caused the disappearance of phenanthrene when grown in low- as well as high-nitrogen media. Moreover, lignin and manganese peroxidase activities were not detected in any of the cultures incubated in the presence of phenanthrene. Additionally, the mineralization of phenanthrene was observed even under nonligninolytic conditions. The results collectively indicate that lignin and manganese peroxidases are not essential for the degradation of phenanthrene by P. chrysosporium. The observation that phenanthrene degradation occurs under nonligninolytic conditions suggests that the potential of P. chrysosporium for degradation of certain environmental pollutants is not limited to nutrient starvation conditions. PMID:1444413

  3. Extractive biodegradation and bioavailability assessment of phenanthrene in the cloud point system by Sphingomonas polyaromaticivorans.

    PubMed

    Pan, Tao; Deng, Tao; Zeng, Xinying; Dong, Wei; Yu, Shuijing

    2016-01-01

    The biological treatment of polycyclic aromatic hydrocarbons is an important issue. Most microbes have limited practical applications because of the poor bioavailability of polycyclic aromatic hydrocarbons. In this study, the extractive biodegradation of phenanthrene by Sphingomonas polyaromaticivorans was conducted by introducing the cloud point system. The cloud point system is composed of a mixture of (40 g/L) Brij 30 and Tergitol TMN-3, which are nonionic surfactants, in equal proportions. After phenanthrene degradation, a higher wet cell weight and lower phenanthrene residue were obtained in the cloud point system than that in the control system. According to the results of high-performance liquid chromatography, the residual phenanthrene preferred to partition from the dilute phase into the coacervate phase. The concentration of residual phenanthrene in the dilute phase (below 0.001 mg/L) is lower than its solubility in water (1.18 mg/L) after extractive biodegradation. Therefore, dilute phase detoxification was achieved, thus indicating that the dilute phase could be discharged without causing phenanthrene pollution. Bioavailability was assessed by introducing the apparent logP in the cloud point system. Apparent logP decreased significantly, thus indicating that the bioavailability of phenanthrene increased remarkably in the system. This study provides a potential application of biological treatment in water and soil contaminated by phenanthrene. PMID:26392138

  4. Two new anxiolytic phenanthrenes found in the medullae of Juncus effusus.

    PubMed

    Wang, Yang; Li, Gui-Yun; Fu, Qian; Hao, Tai-Sen; Huang, Jian-Mei; Zhai, Hai-Feng

    2014-08-01

    Six phenanthrenes, 2-methoxy-7-hydroxy-1-methyl-5-vinyl phenanthrene (1), juncusin (2), dehydroeffusol (3), juncusol (4), effusol (5), and dehydroeffusal (6), were isolated from the medullae of Juncus effusus L. Compounds 1 and 2 were identified as being new structures, and both of them showed anxiolytic activity at dosages of 10 and 2.5 mg/kg, respectively. PMID:25233602

  5. Physiological and molecular responses of springtails exposed to phenanthrene and drought.

    PubMed

    Holmstrup, Martin; Slotsbo, Stine; Schmidt, Stine N; Mayer, Philipp; Damgaard, Christian; Sørensen, Jesper G

    2014-01-01

    Interaction between effects of hazardous chemicals in the environment and adverse climatic conditions is a problem that receives increased attention in the light of climate change. We studied interactive effects of phenanthrene and drought using a test system in which springtails (Folsomia candida Willem) were concurrently exposed to a sublethal phenanthrene level via passive dosing from silicone (chemical activity of 0.010), and sublethal drought from aqueous NaCl solutions (water activity of 0.988). Previous studies have shown that the combined effects of high levels of phenanthrene and drought, respectively, interact synergistically when using lethality as an end-point. Here, we hypothesized that phenanthrene interferes with physiological mechanisms involved in drought tolerance, and that drought influences detoxification of phenanthrene. However, this hypothesis was not supported by data since phenanthrene had no effect on drought-protective accumulation of myo-inositol, and normal water conserving mechanisms of F. candida were functioning despite the near-lethal concentrations of the toxicant. Further, detoxifying induction of cytochrome P450 and glutathione-S-transferase was not impeded by drought. Both phenanthrene and drought induced transcription of heat shock protein (hsp70) and the combined effect of the two stressors on hsp70 transcription was additive, suggesting that the cellular stress and lethality imposed by these levels of phenanthrene and drought were also additive. PMID:24095812

  6. Complexing of metal ions by humic substances

    SciTech Connect

    Bryan, N.D.; Zhang, Y.; Jones, M.N.

    1995-12-31

    The interaction of metal ions with humic substances is being studied using two different techniques. UV-scanning ultracentrifugation is being used to determine molecular weights and to investigate changes in aggregation brought about by metal ion complexation. The relationship between cation charge and conformation of the humic ligands is also being investigated. The complexation of actinide elements (U, Np, Pu, Am) by humic substances from soils contaminated by both natural processes and by low-level effluent releases is also being studied. Gel permeation chromatography has been used to show both that different fractions of humic substances vary greatly in their effectiveness as ligands and that different actinide elements associate with different fractions. These studies have also shown that uranium desorption is kinetically controlled by humic substances.

  7. Effect of root exudates on sorption, desorption, and transport of phenanthrene in mangrove sediments.

    PubMed

    Jia, Hui; Lu, Haoliang; Dai, Minyue; Hong, Hualong; Liu, Jingchun; Yan, Chongling

    2016-08-15

    The effect of root exudates on the environmental behaviors of phenanthrene in mangrove sediments is poorly understood. In order to evaluate their influence, comprehensive laboratory experiments were performed using batch equilibrium and thin-layer chromatography (TLC) analyses. In the presence of root exudates, sorption of phenanthrene was inhibited, whereas desorption and mobility were promoted, and were elevated as root exudate concentrations increased. Among the three representative low molecular weight organic acids (LMWOAs) (citric, oxalic, and acetic acids), citric acid promoted desorption and mobility of phenanthrene more effectively than the other two. In addition, application of artificial root exudates (AREs) enhanced phenanthrene desorption, and mobility was always lower than that with the same concentration of LMWOAs, suggesting that LMWOAs predominantly affected the fate of phenanthrene in sediments. The results of this study could enhance our understanding of the mobility of persistent organic pollutants in sediment-water system. PMID:27293074

  8. Adsorption and bioaccessibility of phenanthrene on carbon nanotubes in the in vitro gastrointestinal system.

    PubMed

    Li, Wei; Zhao, Jian; Zhao, Qing; Zheng, Hao; Du, Peng; Tao, Shu; Xing, Baoshan

    2016-10-01

    Adsorption and bioaccessibility of phenanthrene on graphite and multiwalled carbon nanotubes (CNTs) were investigated in simulated gastrointestinal fluid using a passive dosing system. The saturated adsorption capacity of phenanthrene on different adsorbents follows an order of hydroxylated CNTs (H-CNTs)>carboxylated CNTs (C-CNTs)>graphitized CNTs (G-CNTs)>graphite, consistent with the order of their surface area and micropore volume. The change of phenanthrene adsorption on the adsorbents is different with the presence of pepsin (800mg/L) and bile salts (500mg/L and 5000mg/L, abbreviated as BS500 and BS5000). Both solubilization of phenanthrene by pepsin and bile salts and their competition with phenanthrene for the adsorption sites play a role. In addition, the large increase of the maximum adsorption capacity in BS5000 solution indicates an enhanced dispersion of CNTs or an exfoliation of graphite by bile salts, which consequently increases the exposed surface area. The bioaccessibility increases in pepsin and BS500 solution with a growing free phenanthrene concentration. Although the bioaccessibility of phenanthrene stalls or slightly decreases in the middle range of free phenanthrene concentration in BS5000 solution, the bioaccessibility overall is much higher than that in pepsin and BS500 solution at the same phenanthrene level. It is impossible to separate the effect of competition from dispersion (or exfoliation) at this stage, but the relative contribution of solubilization to phenanthrene desorption in pepsin and BS500 solutions was quantified, which improves our understanding of the mechanisms on bioaccessibility of adsorbed pollutants on CNTs. PMID:27213670

  9. Thermodynamics and existing phase of Ba-phenanthrene

    NASA Astrophysics Data System (ADS)

    Heguri, Satoshi; Thi Nhu Phan, Quynh; Tanabe, Yoichi; Tanigaki, Katsumi

    2015-03-01

    The recent discovery of superconductivity in potassium doped picene suggested the possibility of a new class of superconductors. The problem is that no satisfactory guide to improve the superconducting shielding fraction had been provided until recently. However, a high superconducting shielding fraction of 65 % was reported for Ba1.5(phenanthrene). Considering this situation, phenanthrene (PHN) appears to be a key material for confirming the existence of metallicity and superconductivity in the aromatic hydrocarbon (AHC) family, and also for clarifying the physical properties and superconducting mechanism of AHC superconductors. In the present work, the thermodynamics for intercalation of PHN with Ba is studied in comparison with its isomer of anthracene (AN). Contrarily to previous reports by other authors, the important observation that Ba is intercalated into neither PHN nor AN without affecting their molecular structures is unambiguously made by differential scanning calorimetry measurements and annealing time dependences observed by powder x-ray diffraction measurements. The reactions of Ba and PHN at elevated temperatures lead this system to molecular decomposition instead of intercalation. The phenomena of metallicity and superconductivity in PHN intercalated with alkaline earth metals (Ba or Sr) should be reconsidered.

  10. Molecular size of aquatic humic substances

    USGS Publications Warehouse

    Thurman, E.M.; Wershaw, R. L.; Malcolm, R.L.; Pinckney, D.J.

    1982-01-01

    Aquatic humic substances, which account for 30 to 50% of the organic carbon in water, are a principal component of aquatic organic matter. The molecular size of aquatic humic substances, determined by small-angle X-ray scattering, varies from 4.7 to 33 A?? in their radius of gyration, corresponding to a molecular weight range of 500 to greater than 10,000. The aquatic fulvic acid fraction contains substances with molecular weights ranging from 500 to 2000 and is monodisperse, whereas the aquatic humic acid fraction contains substances with molecular weights ranging from 1000 to greater than 10,000 and is generally polydisperse. ?? 1982.

  11. Adsorption interactions of humic acids with biocides

    NASA Astrophysics Data System (ADS)

    Mal'Tseva, E. V.; Ivanov, A. A.; Yudina, N. V.

    2009-11-01

    The chemical composition of humic acids from brown coal (Aldrich) was determined by element analysis, 13C NMR spectroscopy, and potentiometric titration. The adsorption ability of humic acids with different biocides (cyproconasol, propiconasol, tebuconasol, irgarol 1051, and DCOIT) was studied. The adsorption ability of a mixture of biocides in aqueous solutions was higher than that of the individual components. The limiting concentration of humic acids at which adsorption of biocides was maximum was determined. Adsorption constants were calculated by the Freundlich equation for each biocide in aqueous solution.

  12. Degradation of phenanthrene and pyrene in spiked soils by single and combined plants cultivation.

    PubMed

    Cheema, Sardar Alam; Imran Khan, Muhammad; Shen, Chaofeng; Tang, Xianjin; Farooq, Muhammad; Chen, Lei; Zhang, Congkai; Chen, Yingxu

    2010-05-15

    The present study was conducted to investigate the capability of four plant species (tall fescue, ryegrass, alfalfa, and rape seed) grown alone and in combination to the degradation of phenanthrene and pyrene (polycyclic aromatic hydrocarbons, PAHs) in spiked soil. After 65 days of plant growth, plant biomass, dehydrogenase activity, water-soluble phenolic (WSP) compounds, plant uptake and accumulation and residual concentrations of phenanthrene and pyrene were determined. Our results showed that presence of vegetation significantly enhanced the dissipation of phenanthrene and pyrene from contaminated soils. Higher degradation rates of PAHs were observed in the combined plant cultivation (98.3-99.2% phenanthrene and 88.1-95.7% pyrene) compared to the single plant cultivation (97.0-98.0% phenanthrene and 79.8-86.0% pyrene). Contribution of direct plant uptake and accumulation of phenanthrene and pyrene was very low compared to the plant enhanced dissipation. By contrast, plant-promoted biodegradation was the predominant contribution to the remediation enhancement. The correlation analysis indicates a negative relation between biological activities (dehydrogenase activity and WSP compounds) and residual concentrations of phenanthrene and pyrene in planted soils. Our results suggest that phytoremediation could be a feasible choice for PAHs contaminated soil. Moreover, the combined plant cultivation has potential to enhance the process. PMID:20079966

  13. A comparison of the accumulation of phenanthrene by marine amphipods in water versus sediment

    SciTech Connect

    Fusi, T.; Weber, L.J.

    1995-12-31

    The objective of this research is to compare the accumulation of the polycyclic aromatic hydrocarbon phenanthrene by marine amphipods from sediment and interstitial water versus from a water only exposure system. The equilibrium partitioning theory assumes that the exposure and response of benthic invertebrates are the same when exposed to the same contaminant concentration in water and interstitial water. In this series of experiments, three infaunal marine amphipod species; Eohaustorius estuarius (non tube-forming, burrowing amphipod), Leptocheirus plumulosus (burrow-building amphipod) and Grandidierella japonica (tube-building amphipod), were exposed to {sup 14}C-phenanthrene under three experimental conditions: (1) sediment spiked at a concentration resulting in an interstitial water concentration of 2.5 {micro}g/l phenanthrene; (2) sediment spiked at a concentration resulting in interstitial water concentration of 2.5 {micro}g/l and the overlying water spiked at 2.5 {micro}g/l phenanthrene; (3) a water only exposure with the water at a concentration of 2.5 {micro}g/l phenanthrene, The exposures were conducted in a static renewal system with the overlying and exposure water being replaced every 8 hours. The bioaccumulation of phenanthrene was followed over 72 hours. In all three species of amphipods, the accumulation of phenanthrene was significantly greater in the water only exposure than in the two sediment exposures. At 72 hours, the amphipod body burdens of phenanthrene in the water only exposures were, depending on the species, 7 to 24 times that of the sediment only exposures. The results suggest that water only exposures may overestimate sediment or interstitial exposure to phenanthrene and other nonionic, lipophilic compounds.

  14. Molecular aggregation of humic substances

    USGS Publications Warehouse

    Wershaw, R. L.

    1999-01-01

    Humic substances (HS) form molecular aggregates in solution and on mineral surfaces. Elucidation of the mechanism of formation of these aggregates is important for an understanding of the interactions of HS in soils arid natural waters. The HS are formed mainly by enzymatic depolymerization and oxidation of plant biopolymers. These reactions transform the aromatic and lipid plant components into amphiphilic molecules, that is, molecules that consist of separate hydrophobic (nonpolar) and hydrophilic (polar) parts. The nonpolar parts of the molecules are composed of relatively unaltered segments of plant polymers and the polar parts of carboxylic acid groups. These amphiphiles form membrane-like aggregates on mineral surfaces and micelle-like aggregates in solution. The exterior surfaces of these aggregates are hydrophilic, and the interiors constitute separate hydrophobic liquid-like phases.

  15. Immunomodulative properties of humic peat preparations

    NASA Astrophysics Data System (ADS)

    Stepchenko, L. M.; Syedykh, N. J.

    2010-05-01

    It is proved, that the humic peat preparations promote the resistance of plants, animals and poultry to the influence of both abyotyc and byotyc extreme factors of external environment, to action. It was shown by us before, that biologically active compounds from peat promote stability against different diseases of agricultural animals and poultry. We conducted researches of humic preparations influence (hydrohumate and oxyhumate) on several indexes of immunoreactivity of the organisms of chickens broilers, ostriches, cows and laboratory rats. It is found out, that adding of humic preparations to forage or drinking water results in the normalization of immunity indexes; in particular, leucocytes level, in the increase of the level of some classes of immunoglobuline in blood, of haemoglobin level, T- and B-lymphocytes level, as well as common unspecific resistance - lyzocymic, phagocytic and bactericidic activity. These results allow to suggest that the peat humic preparations show immunomodulative activity, influencing both on humoral and cel immunity links.

  16. Infrared Spectra of Perdeuterated Naphthalene, Phenanthrene, Chrysene, and Pyrene

    NASA Technical Reports Server (NTRS)

    Bauschlicher, Charles W., Jr.; Langhoff, Stephen R.; Sandford, Scott A.; Hudgins, Douglas M.; Arnold, James O. (Technical Monitor)

    1996-01-01

    Calculations are carried out using density functional theory (DFT) to determine the harmonic frequencies and intensities of perdeuterated naphthalene, phenanthrene, pyrene, and chrysene. We also report matrix- isolation spectra for these four species. The theoretical and experimental frequencies and relative intensities for the perdeuterated species are in generally good agreement. The effect of perdeuteration is to reduce the sum of the integrated intensities by a factor of about 1.75. This reduction occurs for all vibrational motions, except for the weak low frequency ring deformation modes. There is also a significant redistribution of the relative intensities between the out-of-plane C-D bands relative to those found for the out-of-plane C-H bands. The theoretical isotopic ratios provide an excellent diagnostic of the degree of C-H(C-D) involvement in the vibrational bands, allowing in most cases a clear distinction of the type of motion.

  17. Drift mobility of holes in phenanthrene single crystals

    NASA Technical Reports Server (NTRS)

    Sonnonstine, T. J.; Hermann, A. M.

    1974-01-01

    The temperature dependence of drift mobilities of holes in single crystals of phenanthrene was measured in the range from 203 to 353 K in three crystallographic directions. Below the anomaly temperature of 72 C, the mobility temperature dependences are consistent with the Munn and Siebrand slow-phonon hopping process in the b direction and the Munn and Siebrand slow-phonon coherent mode in the a and c prime directions. The drift mobility temperature dependences in crystals that have been cooled through the anomaly temperature in the presence of illumination and an electric field are consistent with the model of Spielberg et al. (1971), in which the hindered vibration of the 4,5 hydrogens introduces a new degree of freedom above 72 C.

  18. Measuring the toxicity of alkyl-phenanthrenes to early life stages of medaka (Oryzias latipes) using partition-controlled delivery.

    PubMed

    Turcotte, Dominique; Akhtar, Parveen; Bowerman, Michelle; Kiparissis, Yiannis; Brown, R Stephen; Hodson, Peter V

    2011-02-01

    Alkyl-phenanthrenes are a class of compounds present in crude oil and toxic to developing fish. Most research on alkyl-phenanthrenes has focused on retene (7-isopropyl-1-methyl-phenanthrene), but little is known about the chronic toxicity of related congeners to the early life stages of fish. This project is the first to describe the chronic toxicity of a series of alkyl-phenanthrenes to the embryos of Japanese medaka (Oryzias latipes) using the partition-controlled delivery (PCD) method of exposure and is the first to establish a relationship between toxicity of alkyl-phenanthrenes and log P. With PCD, test concentrations were maintained by equilibrium partitioning of test chemicals from polydimethylsiloxane (PDMS) films containing various concentrations of C1 to C4 phenanthrenes. Log film:solution partition constants (log K(fs)) and aqueous solubility limits were determined for each alkyl-phenanthrene. The prevalence of abnormalities in fish embryos increased in an exposure-dependent manner, with median effective concentration (EC50) values lower than experimental solubility limits of the compounds, and typical of environmental concentrations. Alkyl-phenanthrenes were more toxic to medaka embryos than unsubstituted phenanthrene, with effects resembling those of dioxin and indicating a specific receptor-based mechanism of toxicity. These results extend conclusions for the Exxon Valdez oil spill, suggest a specific mechanism of toxicity for alkyl-phenanthrenes, and provide a model for assessing the risks of mixture toxicity. PMID:21072839

  19. The impact of carbon nanomaterials on the development of phenanthrene catabolism in soil.

    PubMed

    Oyelami, Ayodeji O; Semple, Kirk T

    2015-07-01

    This study investigates the impact of different types of carbon nanomaterials (CNMs) namely C60, multi-walled carbon nanotubes (MWCNTs) and fullerene soot on the catabolism of (14)C-phenanthrene in soil by indigenous microorganisms. Different concentrations (0%, 0.01%, 0.1% and 1%) of the different CNMs were blended with soil spiked with 50 mg kg(-1) of (12)C-phenanthrene, and aged for 1, 25, 50 and 100 days. An increase in the concentration of MWCNT- and FS-amended soils showed a significant difference (P = 0.014) in the lag phase, maximum rates and overall extent of (14)C-phenanthrene mineralisation. Microbial cell numbers did not show an obvious trend, but it was observed that control soils had the highest population of heterotrophic and phenanthrene degrading bacteria at all time points. PMID:26067741

  20. Fluorescence of aqueous solutions of commercial humic products

    NASA Astrophysics Data System (ADS)

    Gosteva, O. Yu.; Izosimov, A. A.; Patsaeva, S. V.; Yuzhakov, V. I.; Yakimenko, O. S.

    2012-01-01

    We have studied the spectral luminescence characteristics of aqueous solutions of humic products obtained from different raw material sources, and their behavior as the excitation wavelength increases from 270 nm to 355 nm. We have identified differences in the spectral properties of industrial humic products from coalified materials, lignin-containing organic waste, and humic products from plant raw material (peat, sapropel, vermicompost). We have shown that humic products from plant raw material have spectral properties closer to those for humic substances in natural water or soil than humic products from coalified materials.

  1. COMPARISON OF PHOTOCHEMICAL BEHAVIOR OF VARIOUS HUMIC SUBSTANCES IN WATER: III. SPECTROSCOPIC PROPERTIES OF HUMIC SUBSTANCES

    EPA Science Inventory

    Spectral absorption coefficients and fluorescence quantum efficiencies were determined for humic substances from a variety of sources. Specific absorption coefficients, K(h), for humic substances at wavelengths lambda from 300 to 500 nm can be closely described by the relation Ae...

  2. Effects of a nonionic surfactant on biodegradation of phenanthrene and hexadecane in soil

    SciTech Connect

    Macur, R.E.; Inskeep, W.P.

    1999-09-01

    The influence of a nonionic (alcohol ethoxylate) surfactant (Witconol SN70) on biodegradation of phenanthrene and hexadecane (nonaqueous-phase liquid) in soil was studied in batch and transport systems. Simultaneous enhancement of phenanthrene and hexadecane degradation was noted at surfactant doses resulting in aqueous-phase surfactant concentrations below the critical micelle concentration (CMC). Conversely, degradation rates of both compounds declined to essentially zero at supra-CMC doses, suggesting that distinct mechanisms of inhibition and enhancement were operating depending on the effective surfactant concentration. Surfactant doses resulting in enhanced degradation correlated with enhanced gross microbial activity as determined using total CO{sub 2} evolution rates. Supra-CMC does that resulted in inhibited degradation did not suppress gross microbial activity. Furthermore, measurements of phenanthrene solubilization and surface tension indicated that phenanthrene was solubilized at supra-CMC levels of surfactant. Mechanisms of inhibition of phenanthrene and hexadecane degradation at supra-CMC surfactant concentrations may include changes in interfacial chemistry and subsequent mass transfer processes due to sorbed surfactant, reduced bioavailability of micelle-bound phenanthrene and hexadecane, or inhibition of specific members of the microbial community responsible for hydrophobic organic compound degradation.

  3. [Screening of a phenanthrene-degrading bacterium and its degradation conditions].

    PubMed

    Zhou, Le; Sheng, Xiafang; Zhang, Shijin; Liu, Jing

    2005-12-01

    Several PAHs-degrading bacteria were isolated from the soil near a petrochemicals factory, and one strain Fl0a identified as B. sphaericus was chosen for use. The study on the phenanthrene-degradation potential of the strain and its affecting factors showed that at 28 degrees C, the degradation rate of phenanthrene (50 mg x L(-1)) was 98.12% after 27 hours rotary culture, and 98.47% after 84 hours static culture. F10a had a good phenanthrene-degradation capability when the pH was 4, 6 and 8, but its growth was inhibited when pH was 10. Cr2+ was toxic to the strain, Cu2+ could delay the degradation of phenanthrene, while Zn2+ and Pb2+ had no significant effects. The degradation rate of phenanthrene (200 mg x L(-1)) was 99.6% after 84 hours rotary culture. A significant positive relationship was found between bacterial growth and phenanthrene degradation. PMID:16515196

  4. A battery of bioassays for the evaluation of phenanthrene biotoxicity in soil.

    PubMed

    Khan, Muhammad Imran; Cheema, Sardar Alam; Tang, Xianjin; Hashmi, Muhammad Zaffar; Shen, Chaofeng; Park, Joonhong; Chen, Yingxu

    2013-07-01

    A battery of bioassays was used to assess the ecotoxicological risk of soil spiked with a range of phenanthrene levels (0.95, 6.29, 38.5, 58.7, 122, and 303 μg g(-1) dry soil) and aged for 69 days. Multiple species (viz. Brassica rapa, Eisenia feotida, Vibrio fischeri), representing different trophic levels, were used as bioindicator organisms. Among acute toxicity assays tested, the V. fischeri luminescence inhibition assay was the most sensitive indicator of phenanthrene biotoxicity. More than 15 % light inhibition was found at the lowest phenanthrene level (0.95 μg g(-1)). Furthermore, comet assay using E. fetida was applied to assess genotoxicity of phenanthrene. The strong correlation (r (2) ≥ 0.94) between phenanthrene concentration and DNA damage indicated that comet assay is appropriate for testing the genotoxic effects of phenanthrene-contaminated soil. In the light of these results, we conclude that the Microtox test and comet assay are robust and sensitive bioassays to be employed for the risk evaluation of polycyclic aromatic hydrocarbon-contaminated soil. PMID:23440446

  5. Changes in the adsorption of bisphenol A, 17 α-ethinyl estradiol, and phenanthrene on marine sediment in Hong Kong in relation to the simulated sediment organic matter decomposition.

    PubMed

    Fei, Ying-heng; Xing, Baoshan; Li, Xiao-yan

    2014-09-01

    Marine sediment with an input of particulate organic matter was incubated to simulate the early aging process. On the sediment after various incubation periods, adsorption and desorption tests were conducted for three selected organic micropollutants: bisphenol A (BPA), 17α-ethinyl estradiol (EE2), and phenanthrene (Phe). The results showed significant sediment organic matter (SOM) decomposition during the incubation, and the SOM decay and transformation had a profound impact on the adsorption of organic compounds by the sediment. An increasing-delay-increasing pattern of change was observed for the SOM normalized partition coefficients of EE2 and Phe. This change was accordant to the transformation of SOM from labile organics into active biomass and its microbial products, and finally into more condensed and humic-like substances. Comparison between the 3 model micropollutants indicates that the chemical adsorption behaviors were mostly affected by their hydrophobic properties. PMID:24929636

  6. Natural humics impact uranium bioreduction and oxidation

    SciTech Connect

    Gu, Baohua; Yan, Hui; Zhou, Ping; Watson, David B; Park, Melora; IstokD., Jonathan

    2005-06-01

    Although humic substances occur ubiquitously in soil and groundwater, their effect on the biological reduction of uranium(VI) and subsequent reoxidation of U(IV) is poorly understood. This study investigated the role of humics in enhancing the bioreduction of U(VI) in laboratory kinetic studies, in field push-pull tests, and in the presence or absence of metal ions such as Ca{sup 2+} and Ni{sup 2+}, which are known to inhibit the biological reduction of U(VI). Results from laboratory experiments indicate that, under strict anaerobic conditions, the presence of humic materials enhanced the U(VI) reduction rates (up to 10-fold) and alleviated the toxicity effect of Ni{sup 2+} on microorganisms. Humic acid was found to be more effective than fulvic acid in enhancing the reduction of U(VI). Such an enhancement effect is attributed to the ability of these humics in facilitating electron-transfer reactions and/or in complexing Ca{sup 2+} and Ni{sup 2+} ions. Similarly, field push-pull tests demonstrated a substantially increased rate of U(VI) reduction when humic acid was introduced into the site groundwater. However, humics were also found to form complexes with reduced U(IV) and increased the oxidation of U(IV) (when exposed to oxygen) with an oxidation half-life on the order of a few minutes. Both of these processes render uranium soluble and potentially mobile in groundwater, depending on site-specific and dynamic geochemical conditions. Future studies must address the stability and retention of reduced U(IV) under realistic field conditions (e.g., in the presence of dissolved oxygen and low concentrations of complexing organics).

  7. Humic substance formation during wastewater infiltration

    SciTech Connect

    Siegrist, R.L. ); Hildmann-Smed, R.; Filip, Z.K. , Langen . Inst. fuer Wasser-, Boden- und Lufthygiene); Jenssen, P.D. . Centre for Soil and Environmental Research)

    1991-01-01

    Soil infiltration of wastewater effluents is a widely practiced method of treatment and disposal/reuse throughout the world. Renovation of the wastewater results from a wide variety of complex physicochemical and biological processes. One set of processes is speculated to involve the accumulation of organic matter by filtration and sorption followed by formation of humic substances. This humic substance formation can effect the performance of soil treatment systems by contributing to soil pore clogging and reduction in hydraulic capacity, and by yielding reactive substances and an enhancement of purification processes. While there has been a wealth of research into the nature and genesis of humic substances in terrestrial environments, there has been limited research of humic substance formation during soil infiltration of wastewater. The purpose of the research reported herein was to determine if humic substances can form under conditions typical of those present during wastewater infiltration into natural soil systems. This work was conducted during 1989 to 1990 as a collaborative effort between the Centre for Soil and Environmental Research, located in Aas, Norway and the Institute for Water, Soil and Air Hygiene located in Langen, West Germany. 11 refs., 3 figs., 6 tabs.

  8. Cyclopenta[c]phenanthrenes--chemistry and biological activity.

    PubMed

    Brzuzan, Paweł; Góra, Maciej; Luczyński, Michał K; Woźny, Maciej

    2013-06-25

    Despite cyclopenta-fused polycyclic aromatic hydrocarbons (CP-PAHs) having been detected in the environment, the ability of these compounds to induce cellular and tissue responses remains poorly characterized. In this review, we look at the chemistry and biological activity of the cyclopenta[c]phenanthrenes (CP[c]Phs) as potential chemicals of concern in the process of risk assessment. The first part of the review deals with the environmental occurrence and chemistry of CP-PAHs, focusing on available methods of CP[c]Ph chemical synthesis. The most interesting structural feature of the CP[c]Ph is the presence of a pseudo fjord-region constructed by the cyclopentane ring. This compound can be treated either as a structurally similar one to B[c]Ph, or as a phenanthrene skeleton with an electrodonating alkyl substituent in the bay-region of the molecule. The second thread, providing available data on the adverse effects of CP[c]Ph compounds on cells and tissues of living organisms, mainly fish, improves our understanding of these possible environmental hazards. The data show that CP[c]Ph is less potent at inducing CYP1A gene expression in rainbow trout than benzo[a]pyrene (B[a]P), a well-known Ah-receptor agonist. Interestingly, the CP[c]Ph dependent up-regulation of CYP1A mRNA is positively correlated with the incidences of clastogenic changes in rainbow trout erythrocytes. CP[c]Ph has, comparably to B[a]P, a potential to repress expression of tumor suppressor p53, in the head kidney of rainbow trout. Furthermore, estrogen responsive genes in fish liver, ERα and VTG, are not induced by CP[c]Ph, suggesting that the compound has no endocrine disrupting potential. However, some CP[c]Phs show mutagenic activity when investigated in the Ames test, and exhibit genotoxic properties in in vitro micronucleus assay. The above characteristics suggest that CP-PAHs are chemicals of concern for which potential pathways of exposure should be further identified. PMID:23628509

  9. Determination of polycyclic aromatic hydrocarbons by four-way parallel factor analysis in presence of humic acid

    NASA Astrophysics Data System (ADS)

    Yang, Ruifang; Zhao, Nanjing; Xiao, Xue; Yu, Shaohui; Liu, Jianguo; Liu, Wenqing

    2016-01-01

    There is not effective method to solve the quenching effect of quencher in fluorescence spectra measurement and recognition of polycyclic aromatic hydrocarbons in aquatic environment. In this work, a four-way dataset combined with four-way parallel factor analysis is used to identify and quantify polycyclic aromatic hydrocarbons in the presence of humic acid, a fluorescent quencher and an ubiquitous substance in aquatic system, through modeling the quenching effect of humic acid by decomposing the four-way dataset into four loading matrices corresponding to relative concentration, excitation spectra, emission spectra and fluorescence quantum yield, respectively. It is found that Phenanthrene, pyrene, anthracene and fluorene can be recognized simultaneously with the similarities all above 0.980 between resolved spectra and reference spectra. Moreover, the concentrations of them ranging from 0 to 8 μg L-1 in the test samples prepared with river water could also be predicted successfully with recovery rate of each polycyclic aromatic hydrocarbon between 100% and 120%, which were higher than those of three-way PARAFAC. These results demonstrate that the combination of four-way dataset with four-way parallel factor analysis could be a promising method to recognize the fluorescence spectra of polycyclic aromatic hydrocarbons in the presence of fluorescent quencher from both qualitative and quantitative perspective.

  10. Determination of polycyclic aromatic hydrocarbons by four-way parallel factor analysis in presence of humic acid.

    PubMed

    Yang, Ruifang; Zhao, Nanjing; Xiao, Xue; Yu, Shaohui; Liu, Jianguo; Liu, Wenqing

    2016-01-01

    There is not effective method to solve the quenching effect of quencher in fluorescence spectra measurement and recognition of polycyclic aromatic hydrocarbons in aquatic environment. In this work, a four-way dataset combined with four-way parallel factor analysis is used to identify and quantify polycyclic aromatic hydrocarbons in the presence of humic acid, a fluorescent quencher and an ubiquitous substance in aquatic system, through modeling the quenching effect of humic acid by decomposing the four-way dataset into four loading matrices corresponding to relative concentration, excitation spectra, emission spectra and fluorescence quantum yield, respectively. It is found that Phenanthrene, pyrene, anthracene and fluorene can be recognized simultaneously with the similarities all above 0.980 between resolved spectra and reference spectra. Moreover, the concentrations of them ranging from 0 to 8μgL(-1) in the test samples prepared with river water could also be predicted successfully with recovery rate of each polycyclic aromatic hydrocarbon between 100% and 120%, which were higher than those of three-way PARAFAC. These results demonstrate that the combination of four-way dataset with four-way parallel factor analysis could be a promising method to recognize the fluorescence spectra of polycyclic aromatic hydrocarbons in the presence of fluorescent quencher from both qualitative and quantitative perspective. PMID:26233788

  11. MEASUREMENTS OF BINDING SITE CONCENTRATIONS IN HUMIC SUBSTANCES

    EPA Science Inventory

    The use of thermodynamic models to calculate the effects of humic substances on metal speciation requires that the complexation capacity (CC) of the humic substance be determined. If the CC of a humic substance is viewed as a compositional rather than a thermodynamic property, th...

  12. Iodine binding to humic acid.

    PubMed

    Bowley, H E; Young, S D; Ander, E L; Crout, N M J; Watts, M J; Bailey, E H

    2016-08-01

    The rate of reactions between humic acid (HA) and iodide (I(-)) and iodate (IO3(-)) have been investigated in suspensions spiked with (129)I at concentrations of 22, 44 and 88 μg L(-1) and stored at 10 °C. Changes in the speciation of (129)I(-), (129)IO3(-) and mixed ((129)I(-) + (129)IO3(-)) spikes were monitored over 77 days using liquid chromatography inductively coupled plasma mass spectrometry (LC-ICP-MS). In suspensions spiked with (129)I(-) 25% of the added I(-) was transformed into organic iodine (Org-(129)I) within 77 days and there was no evidence of (129)IO3(-) formation. By contrast, rapid loss of (129)IO3(-) and increase in both (129)I(-) and Org-(129)I was observed in (129)IO3(-)-spiked suspensions. However, the rate of Org-(129)I production was greater in mixed systems compared to (129)IO3(-)-spiked suspensions with the same total (129)I concentration, possibly indicating IO3(-)I(-) redox coupling. Size exclusion chromatography (SEC) demonstrated that Org-(129)I was present in both high and low molecular weight fractions of the HA although a slight preference to bond with the lower molecular weight fractions was observed indicating that, after 77 days, the spiked isotope had not fully mixed with the native (127)I pool. Iodine transformations were modelled using first order rate equations and fitted rate coefficients determined. However, extrapolation of the model to 250 days indicated that a pseudo-steady state would be attained after ∼200 days but that the proportion of (129)I incorporated into HA was less than that of (127)I indicating the presence of a recalcitrant pool of (127)I that was unavailable for isotopic mixing. PMID:27231879

  13. Proteomic analysis of plasma membrane proteins in wheat roots exposed to phenanthrene.

    PubMed

    Shen, Yu; Du, Jiangxue; Yue, Le; Zhan, Xinhua

    2016-06-01

    Polycyclic aromatic hydrocarbons (PAHs) are potentially carcinogenic and toxic to humans through ingestion of contaminated food crops. PAHs can enter crop roots through proton/PAH symporters; however, to date, the symporter remains unclear. Here we reveal, for the first time, the plasma membrane proteome of Triticum aestivum seedling roots in response to phenanthrene (a model PAH) exposure. Two-dimensional gel electrophoresis (2-DE) coupled with MALDI-TOF/TOF-MS and protein database search engines were employed to analyze and identify phenanthrene-responsive proteins. Over 192 protein spots are reproducibly detected in each gel, while 8 spots are differentially expressed under phenanthrene treatment. Phenanthrene induces five up-regulated proteins distinguished as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 2, enolase, heat shock protein 80-2, probable mediator of RNA polymerase II transcription subunit 37e (heat shock 70-kDa protein 1), and lactoylglutathione lyase. Three proteins identified as adenosine kinase 2, 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1c, and glyceraldehyde-3-phosphate dehydrogenase 3 are down-regulated under exposure to phenanthrene. The up-regulated proteins are related to plant defense response, antioxidant system, and glycolysis. The down-regulated proteins involve the metabolism of high-energy compounds and plant growth. Magnesium, which is able to bind to enolase, can enhance the transport of phenanthrene into wheat roots. Therefore, it is concluded that phenanthrene can induce differential expression of proteins in relation to carbohydrate metabolism, self-defense, and plant growth on wheat root plasma membrane. This study not only provides novel insights into PAH uptake by plant roots and PAH stress responses, but is also a good starting point for further determination and analyses of their functions using genetic and other approaches. PMID:26897580

  14. Fluorene and phenanthrene uptake by Pseudomonas putida ATCC 17514: kinetics and physiological aspects.

    PubMed

    Rodrigues, Ana C; Wuertz, Stefan; Brito, António G; Melo, Luís F

    2005-05-01

    Pseudomonas putida ATCC 17514 was used as a model strain to investigate the characteristics of bacterial growth in the presence of solid fluorene and phenanthrene. Despite the lower water-solubility of phenanthrene, P. putida degraded this polycyclic aromatic hydrocarbon (PAH) at a maximum observed rate of 1.4 +/- 0.1 mg L(-1) h(-1), higher than the apparent degradation rate of fluorene, 0.8 +/- 0.07 mg L(-1) h(-1). The role of physiological processes on the biodegradation of these PAHs was analyzed and two different uptake strategies were identified. Zeta potential measurements revealed that phenanthrene-grown cells were slightly more negatively charged (-57.5 +/- 4.7 mV) than fluorene-grown cells (-51.6 +/- 4.9 mV), but much more negatively charged than glucose-grown cells (-26.8 +/- 3.3 mV), suggesting that the PAH substrate induced modifications on the physical properties of bacterial surfaces. Furthermore, protein-to-exopolysaccharide ratios detected during bacterial growth on phenanthrene were typical of biofilms developed under physicochemical stress conditions, caused by the presence of sparingly water-soluble chemicals as the sole carbon and energy source for growth, the maximum value for TP/EPS during growth on phenanthrene (1.9) being lower than the one obtained with fluorene (5.5). Finally, confocal laser microscopy observations using a gfp-labeled derivative strain revealed that, in the presence of phenanthrene, P. putida::gfp cells formed a biofilm on accessible crystal surfaces, whereas in the presence of fluorene the strain grew randomly between the crystal clusters. The results showed that P. putida was able to overcome the lower aqueous solubility of phenanthrene by adhering to the solid PAH throughout the production of extracellular polymeric substances, thus promoting the availability and uptake of such a hydrophobic compound. PMID:15800860

  15. Sublethal effects of phenanthrene, nicotine, and pinane on Daphnia pulex

    USGS Publications Warehouse

    Savino, Jacqueline F.; Tanabe, Lila L.

    1989-01-01

    Chronic studies of Daphnia Pulex exposed to different concentrations of phenanthrene, nicotine, and pinane produced consistent sublethal effects among replicates and concentrations. The LOEC's for growth and fecundity with each chemical tested were 3 to 30% of the 48-hr EC50's. Growth decreased as concentration increased for each chemical tested, and fecundity approached zero at 2 to 5 times the LOEC for each chemical. In this study chemicals representing PAHs, heterocyclic nitrogen compounds, and cyclic alkanes, produced detectable sublethal effects in daphnids at less than 0.1 ppm in water. These chronic studies, in conjuction with the more extensive acute toxicity testing (Passino and Smith 1987; Perry and Smith 1988; Smith et al. 1988), provided a relatively quick but thorough toxicological assessment of a large array of chemicals and demonstrated the relative importance of different classes of compounds in changing growth and survival trends in given populations of native organisms. Classic toxicity tests continue to provide a reliable backdrop of results with which the effects of new chemicals or mixtures can be compared.

  16. Removal of naphthalene and phenanthrene using aerobic membrane bioreactor.

    PubMed

    Mijaylova Nacheva, Petia; Esquivel Sotelo, Alberto

    2016-06-01

    The removal of polycyclic aromatic hydrocarbons by membrane bioreactor (MBR) under aerobic conditions had been studied using naphthalene (NAP) and phenanthrene (PHE) as model compounds. Three MBRs with submerged ultra-filtration hollow fiber membranes were operated applying different operational conditions during 6.5 months. Complete NAP and PHE removal was obtained applying loads of 7 gNAP kgTSS(-1) day(-1) and 0.5 gPHE kgTSS(-1) day(-1), while the organic loading rate was adjusted to 0.26 kgCOD kgTSS(-1) day(-1), with the biomass concentration being 6000 mgTSS L(-1), the hydraulic retention time (HRT) 8 h and the solids retention time (SRT) 30 days. Load increases, as well as HRT and SRT reductions, affected the NAP and PHE removals. Biodegradation was found to be the major NAP and PHE removal mechanism. There was no NAP accumulation in the biomass. Low PHE quantities remain sorbed in the biomass and the contribution of the sorption in the removal of this compound was estimated to be less than 0.01 %. The volatilization does not contribute to the PHE removal in MBRs, but the contribution of NAP volatilization can reach up to 0.6 % when HRT of 8 h is applied. PMID:26895256

  17. Novel Phenanthrene Sorption Mechanism by Two Pollens and Their Fractions.

    PubMed

    Zhang, Dainan; Duan, Dandan; Huang, Youda; Yang, Yu; Ran, Yong

    2016-07-19

    A pair of pollens (Nelumbo nucifera and Brassica campestris L.) and their fractions were characterized by elemental analysis and advanced solid-state (13)C NMR techniques and used as biosorbents for phenanthrene (Phen). Their constituents were largely aliphatic components (including sporopollenin), carbohydrates, protein, and lignin as estimated by (13)C NMR spectra of the investigated samples and the four listed biochemical classes. The structure of each nonhydrolyzable carbon (NHC) fraction is similar to that of sporopollenin. The sorption capacities are highly negatively related to polar groups largely derived from carbohydrates and protein but highly positively related to alkyl carbon, poly(methylene) carbon, and aromatic carbon largely derived from sporopollenin and lignin. The sorption capacities of the NHC fractions are much higher than previously reported values, suggesting that they are good sorbents for Phen. The Freundlich n values significantly decrease with increasing concentrations of poly(methylene) carbon, alkyl C, aromatic moieties, aliphatic components, and the lignin of the pollen sorbents, suggesting that aliphatic and aromatic structures and constituents jointly contribute to the increasing nonlinearity. To our knowledge, this is the first investigation of the combined roles of alkyl and aromatic moiety domains, composition, and accessibility on the sorption of Phen by pollen samples. PMID:27322011

  18. Impact of carbon nanotube morphology on phenanthrene adsorption.

    PubMed

    Apul, Onur Guven; Shao, Ting; Zhang, Shujuan; Karanfil, Tanju

    2012-01-01

    The present study examined the roles of the specific surface area (SSA), diameter, and length of carbon nanotubes (CNT) on the adsorption of phenanthrene (PNT) by analyzing the adsorption isotherms obtained with several single-walled carbon nanotubes (SWNT) and multiwalled carbon nanotubes (MWNT). At low equilibrium concentrations (e.g., 1 ppb), MWNTs with larger outer diameters exhibited higher PNT adsorption capacity on an SSA basis than those with smaller diameters. With increasing equilibrium concentration, adsorption on an SSA basis became independent of MWNT diameter, and the total surface area controlled maximum adsorption capacity. A similar analysis for the adsorption of naphthalene, a planar molecule with one less benzene ring but 20 times higher solubility than PNT, showed no correlation with respect to MWNT outer diameter. The results indicated that the surface curvature of MWNT was more important on the adsorption of PNT than on the adsorption of naphthalene. Specific surface area normalized isotherms did not show a correlation between PNT adsorption and lengths of SWNTs and MWNTs. Characterization results indicated that the morphology of CNTs plays an important role on the SSA and pore volume. Data from the manufacturer may not always represent the characteristics of CNTs in a particular batch. Therefore, accurate characterization of CNTs is critical to systematically examine the behavior of CNTs, such as adsorption and transport, in environmental systems. PMID:22002628

  19. Polyurethane foam (PUF) passive samplers for monitoring phenanthrene in stormwater.

    PubMed

    Dou, Yueqin; Zhang, Tian C; Zeng, Jing; Stansbury, John; Moussavi, Massoum; Richter-Egger, Dana L; Klein, Mitchell R

    2016-04-01

    Pollution from highway stormwater runoff has been an increasing area of concern. Many structural Best Management Practices (BMPs) have been implemented for stormwater treatment and management. One challenge for these BMPs is to sample stormwater and monitor BMP performance. The main objective of this study was to evaluate the feasibility of using polyurethane foam (PUF) passive samplers (PSs) for sampling phenanthrene (PHE) in highway stormwater runoff and BMPs. Tests were conducted using batch reactors, glass-tube columns, and laboratory-scale BMPs (bioretention cells). Results indicate that sorption for PHE by PUF is mainly linearly relative to time, and the high sorption capacity allows the PUF passive sampler to monitor stormwater events for months or years. The PUF passive samplers could be embedded in BMPs for monitoring influent and effluent PHE concentrations. Models developed to link the results of batch and column tests proved to be useful for determining removal or sorption parameters and performance of the PUF-PSs. The predicted removal efficiencies of BMPs were close to the real values obtained from the control columns with errors ranging between -8.46 and 1.52%. This research showed that it is possible to use PUF passive samplers for sampling stormwater and monitoring the performance of stormwater BMPs, which warrants the field-scale feasibility studies in the future. PMID:26942631

  20. Involvement of humic substances in regrowth.

    PubMed

    Camper, Anne K

    2004-05-01

    There appear to be interactions in the distribution system that complicate the ability to use AOC/BDOC as an independent assessment of regrowth potential. Two such complications are the limitation of the assays themselves and the potential interaction between the organic carbon concentration with the presence of disinfectants and pipe materials. To address these interactions, a series of experiments spanning several years have been conducted in model distribution systems at the Center for Biofilm Engineering (CBE) using soil-derived humics. When compared to easily utilized organics, humic substances supported the same order of magnitude of biofilm organisms. As carbon concentration was increased from 500 to 1000 to 2000 ppb, there was no increase in growth rate of the organisms, suggesting zero-order kinetics. If the system was chlorinated, there was less biomass, but growth rates were higher. In the presence of corrosion products, humic-fed systems supported more organisms than a control system fed biologically treated water. When free chlorine was maintained at a residual of about 0.2 mg/l, biofilm numbers on the surfaces were reduced. Phosphate alone did not result in fewer bacteria, while a combination of chorine and phosphate had the best results (lowest biofilm numbers). Adjustment to pH 9 was not effective. Recently completed work compared increasing levels of humic substances in the presence of free chlorine and monochloramine on biofilm growth on a number of surfaces (PVC, epoxy, cement, ductile iron). As the concentration of humic substances was increased from 0, 0.5 to 2 mg/l, there was an increase in biofilm numbers on all surfaces. This effect was the most pronounced on iron surfaces. These results illustrate that carbon compounds not measured by the BDOC or AOC tests may profoundly influence biofilm numbers. In addition, iron surfaces are at much higher risk for elevated biofilm counts in the presence of humic substances, even if disinfection is

  1. On the nature of humic substances

    NASA Astrophysics Data System (ADS)

    Fedotov, G. N.; Shoba, S. A.

    2015-12-01

    It is argued that the isolation of low-molecular-weight compounds from humic substances does not prove their supramolecular nature, because small molecules can be sorbed on macromolecules by interacting with them due to noncovalent bonds. The relative mobility of molecular segments in humic substances has been proposed to be used as a criterion for the discrimination between the humic substances of supraand macromolecular nature. The macromolecules are characterized by mobility of their segments, whereas supramolecular systems have stiff structure. This difference between macroand supramolecules results in different behaviors of the matrices (gels) formed from them in the processes of segregation. In the macromolecules, the formations of a new phase appearing at the segregation (microphase separation) are of nano size, at least in one dimension. They are incapable of moving within the matrix and form a well-known, limited set of systems. In the supramolecular matrices, the new-phase formations should have higher mobility and ability to move within the matrix with the formation of particles and zones of not only nano, but also micro sizes, as well as a significantly larger set of systems, including fractal configurations. The experimental electron microscopic study of the humic matrices of soil gels shows that the new-phase formations in the matrix of humic substances have not only nano, but also micro sizes and are capable of moving within the matrix, which confirms the supramolecular nature of humic substances. The proposed method has allowed generalizing the supraand macromolecular approaches, because macromolecules can enter into the composition of supramolecular systems. It is no less important that the behavior of HSs can be perceived as the behavior of stiff impenetrable particles that may compose the structures of different types and sizes.

  2. Determination of humic and fulvic acids in commercial solid and liquid humic products by alkaline extraction and gravimetric determination

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increased use of humic substances in agriculture has generated intense interest among producers, consumers, and regulators for an accurate and reliable method for quantification of humic (HA) and fulvic acids (FA) in raw ores and products. Here we present a thoroughly validated method, the Humic Pro...

  3. Stereoselective metabolism of anthracene and phenanthrene by the fungus Cunninghamella elegans

    SciTech Connect

    Cerniglia, C.E.; Yang, S.K.

    1984-01-01

    The fungus Cunninghamella elegans oxidized anthracene and phenanthrene to form predominately transdihydrodiols. The metabolites were isolated by reversed-phase high-pressure liquid chromatography for structural and conformational analyses. Comparison of the circular dichroism spectrum of the fungal trans-1,2-dihydroxy-1,2-dihydroanthracene to that formed by rat liver microsomes indicated that the major enantiomer of the trans-1,2-dihydroxy-1,2-dihydroanthracene formed by C. elegans had an S,S absolute stereochemistry, which is opposite to the predominately 1R,2R dihydrodiol formed by rat liver microsomes. C. elegans oxidized phenanthrene primarily in the 1,2-positions to form trans-1,2-dihydroxy-1,2-dihydrophenanthrene. In addition, a minor amount of trans-3,4-dihydroxy-3,4-dihydrophenanthrene was detected. Metabolism at the K-region (9,10-positions) of phenanthrene was not detected. Comparison of the circular dichroism spectra of the phenanthrene trans-1,2- and trans-3,4-dihydrodiols formed by C. elegans to those formed by mammalian enzymes indicated that each of the dihydrodiols formed by C. elegans had an S,S absolute configuration. The results indicate that there are differences in both the regio- and stereoselective metabolism of anthracene and phenanthrene between the fungus C. elegans and rat liver microsomes. 26 references.

  4. Stereoselective metabolism of anthracene and phenanthrene by the fungus Cunninghamella elegans.

    PubMed Central

    Cerniglia, C E; Yang, S K

    1984-01-01

    The fungus Cunninghamella elegans oxidized anthracene and phenanthrene to form predominately trans-dihydrodiols. The metabolites were isolated by reversed-phase high-pressure liquid chromatography for structural and conformational analyses. Comparison of the circular dichroism spectrum of the fungal trans-1,2-dihydroxy-1,2-dihydroanthracene to that formed by rat liver microsomes indicated that the major enantiomer of the trans-1,2-dihydroxy-1,2-dihydroanthracene formed by C. elegans had an S,S absolute stereochemistry, which is opposite to the predominately 1R,2R dihydrodiol formed by rat liver microsomes. C. elegans oxidized phenanthrene primarily in the 1,2-positions to form trans-1,2-dihydroxy-1,2-dihydrophenanthrene. In addition, a minor amount of trans-3,4-dihydroxy-3,4-dihydrophenanthrene was detected. Metabolism at the K-region (9,10-positions) of phenanthrene was not detected. Comparison of the circular dichroism spectra of the phenanthrene trans-1,2- and trans-3,4-dihydrodiols formed by C. elegans to those formed by mammalian enzymes indicated that each of the dihydrodiols formed by C. elegans had an S,S absolute configuration. The results indicate that there are differences in both the regio- and stereoselective metabolism of anthracene and phenanthrene between the fungus C. elegans and rat liver microsomes. PMID:6696409

  5. Ethanol and phenanthrene increase the biomass of fungal assemblages and decrease plant litter decomposition in streams.

    PubMed

    Barros, Diana; Oliveira, Patrícia; Pascoal, Cláudia; Cássio, Fernanda

    2016-09-15

    Fungi, particularly aquatic hyphomycetes, have been recognized as playing a dominant role in microbial decomposition of plant litter in streams. In this study, we used a microcosm experiment with different levels of fungal diversity (species number and identity) using monocultures and combinations with up to five aquatic hyphomycete species (Articulospora tetracladia, Tricladium splendens, Heliscus submersus, Tetrachaetum elegans and Flagellospora curta) to assess the effects of ethanol and phenanthrene on three functional measures: plant litter decomposition, fungal biomass accrual and reproduction. Alder leaves were conditioned by fungi for 7days and then were exposed to phenanthrene (1mgL(-1)) dissolved in ethanol (0.1% final concentration) or ethanol (at the concentration used to solubilise phenanthrene) for further 24days. Exposure to ethanol alone or in combination with phenanthrene decreased leaf decomposition and fungal reproduction, but increased fungal biomass produced. All aspects of fungal activity varied with species number. Fungal activity in polycultures was generally higher than that expected from the sum of the weighted performances of participating species in monoculture, suggesting complementarity between species. However, the activity of fungi in polycultures did not exceed the activity of the most productive species either in the absence or presence of ethanol alone or with phenanthrene. PMID:27186876

  6. Liquid-phase oxidation of phenanthrene in presence of Co-Mn catalyst

    SciTech Connect

    Kamneva, A.I.; Koroleva, N.V.; Artemov, A.V.; Sinitsyna, I.M.; Ryuffer, L.I.

    1983-06-10

    Phenanthrene is one of the large-tonnage products of the coal-tar chemical industry. However, so far this hydrocarbon has no economically justified uses. The purpose of the present work was to study the liquid-phase oxidation of phenanthrene in presence of Co-Mn catalyst in o-dichlorobenzene (with additions of valeric acid). It is shown that oxidation of phenanthrene to phenanthrenequinone in presence of Co-Mn catalyst in o-dichlorobenzene and VA is possible in principle. The yield and formation rate of phenanthrenequinone are determined mainly by the composition of the solvent and the initial concentration of the hydrocarbon (phenanthrene). Study, by the method of active factorial experiments, of the influence of temperature, reaction time, and catalyst and phenanthrene concentrations on the principal process characteristics showed that the highest selectivity is reasched at (Cat) = 2x10/sup -2/ M and (RH) = 1.0 M. Under the chosen reaction conditions the reaction proceeds by a consecutive route, with phenanthrenequinone as the intermediate product. The reaction conditions for obtaining the maximum yield of phenanthrenequinone were found.

  7. Humic acid interference with virus recovery by electropositive microporous filters.

    PubMed Central

    Guttman-Bass, N; Catalano-Sherman, J

    1986-01-01

    The effects of humic acid on poliovirus type 1 recovery from water by Zeta Plus 60S filters were investigated. The humic acid interfered by preventing virus adsorption to the filters, and the interference increased as a function of the amount of humic acid filtered. Humic acid decreased virus adsorption when filtered before the virus, but did not elute virus which had adsorbed to the filters. The effects on virus recovery were not due to alterations in virus titer or neutralizability. The addition of AlCl3, which improved virus recovery by electronegative filters in the presence of humic acid, did not aid in overall virus recovery by the Zeta Plus filters in the presence or absence of humic acid. However, the salt and humic acid in combination improved virus adsorption and concurrently reduced virus elution efficiency. The addition of NaH2PO4 had no direct effect on virus recovery and did not alter the effect of humic acid. In an attempt to identify the components of humic acid responsible for the interference, humic materials were fractionated by size by using Sephadex gel chromatography and dialysis, and the fractions were tested for interfering activity. Interference was not associated with specific size fractions of the humic materials. PMID:3021058

  8. Lanthanide--humic substances complexation. II. Calibration of humic ion-binding model V.

    PubMed

    Sonke, Jeroen E

    2006-12-15

    The experimental complexation of the lanthanides (Sc, Y, and rare earth elements) with Suwannee river fulvic acid, Leonardite coal humic acid, and Elliot soil humic acid is described with Humic Ion-Binding Model V. The fitted intrinsic equilibrium constants for metal-proton exchange, pKMHA, for Eu3+ are similar to previously published experimental fits, and linear free energy relationship (LFER) estimated values. The experimentally observed lanthanide contraction effect in REE-humic complex stability is reflected in the gradual decrease in pKMHA from La to Lu. In Model V, a decrease in pKMHA from La to Lu indicates an increase in complex stability. Fitted pKMHA values for heavy REE are lower than those estimated by LFERs. Consequently, REE fractionation by humic substances complexation could be more pronounced than previously thought. Recommended pKMHA values for lanthanide-fulvic and -humic acid complexation are derived by superimposing the fitted trends in pKMHA for all REE, i.e., the decrease in pKMHA from La to Lu, on the average Eu pKMHA value for all literature datasets. These results will allow modeling assessments of organic matter induced REE fractionation in aquatic environments, taking into account changes in pH, ionic strength, and ion competition. A simulation of dissolved REE speciation in an average world river suggests that organic matter outcompetes carbonate complexation, even under alkaline conditions. PMID:17256484

  9. A Phenanthrene Methanol (WR 33063) for Treatment of Acute Malaria

    PubMed Central

    Arnold, J. D.; Martin, D. C.; Carson, P. E.; Rieckmann, K. H.; Willerson, D.; Clyde, D. F.; Miller, R. M.

    1973-01-01

    WR 33063, a phenanthrene methanol, was studied in human volunteers for tolerance and toxicity. In normal volunteers, it was possible to give 4.6 g in four divided doses without adverse effect for 10 days. At this dose level, there was neither evidence of photosensitivity nor adverse renal or cardiac effect. At a dose level of 1.6 g in four divided doses for 6 days, WR 33063 cured 18 of 23 nonimmune volunteers infected with the Smith strain of Plasmodium falciparum from Vietnam. In addition, infections due to the Marks and Braithwaite Vietnam strains were also treated because these strains represent a major therapeutic challenge to chloroquine; six of six and two of three volunteers, respectively, were cured. With the Malayan Camp strain, 1.6 g in four divided doses for 6 days cured all of five volunteers. The African Uganda I strain of chloroquine-responsive malaria was even more responsive to WR 33063; all of six men who received 1.6 g in four divided doses for 6 days were cured, and all of three men who received this same dosage for 3 days were cured. One subject infected with a Haitian strain of P. falciparum was treated and cured. Blood-induced infections with the Chesson strain of P. vivax also responded well to WR 33063 with four of five men cured. In all, 52 men received WR 33063 in tolerance trials, and 59 men with experimental malaria and one man with clinical malaria were treated with WR 33063. PMID:4597714

  10. MEASURING GROWTH OF A PHENANTHRENE DEGRADING BACTERIAL INOCULUM IN SOIL WITH A QUANTITATIVE COMPETITIVE POLYMERASE CHAIN REACTION METHOD. (R825433)

    EPA Science Inventory

    We measured growth of a phenanthrene-degrading bacterium, Arthrobacter, strain RP17, in Forbes soil, amended with 500 small mu, Greekg g−1 phenanthrene using a quantitati...

  11. [Phylogenetic analysis of the genes for naphthalene and phenanthrene degradation in Burkholderia sp. strains].

    PubMed

    Izmalkova, T Yu; Sazonova, O I; Kosheleva, I A; Boronin, A M

    2013-06-01

    The genetic systems responsible for naphthalene and phenanthrene catabolism have been analyzed in the five strains of Burkholderia sp. isolated from soil samples (West Siberia) contaminated by heavy residual fuel oil and in the strain Burkholderia sp. BS3702 from the laboratory collection isolated from soil samples of the coke gas works (Vidnoe, Moscow oblast). The results of this work demonstrate that naphthalene and phenanthrene degradation in the above strains is encoded by the sequences not homologous to the classical nah genes of pseudomonades. In the Burkholderia sp. BS3702 strain, the initial stages of phenanthrene degradation and the subsequent stages of salicylate degradation are controlled by the sequences of different evolutionary origins (phn and nag genes). PMID:24450193

  12. Comparative effects of Aroclor 1254 (polychlorinated biphenyls) and phenanthrene on glucose uptake by freshwater microbial populations.

    PubMed Central

    Sayler, G S; Lund, L C; Shiaris, M P; Sherrill, T W; Perkins, R E

    1979-01-01

    The effects of polychlorinated biphenyl (PCB) and phenanthrene stress on glucose uptake by natural microbial populations were examined by the heterotrophic potential technique. Temporal and spatial distributions in glucose uptake velocities were examined for natural samples as well as PCB- and phenanthrene-stressed samples. Statistical analysis indicated significant variability among the various samples. It was demonstrated that the environmental variables contributed significantly to the variability in uptake kinetics. Although general trends indicated a PCB-induced stimulation in uptake velocities, these trends were in part masked by sample variability. Data analysis indicated no statistically significant PCB or phenanthrene effect on either total glucose uptake velocities or the proportion of 14CO2 evolved, as compared to natural unstressed samples. PMID:114110

  13. Constraint on the potassium content for the superconductivity of potassium-intercalated phenanthrene.

    PubMed

    Huang, Qiao-Wei; Zhong, Guo-Hua; Zhang, Jiang; Zhao, Xiao-Miao; Zhang, Chao; Lin, Hai-Qing; Chen, Xiao-Jia

    2014-03-21

    Raman-scattering measurements were performed on K(x)phenanthrene (0 ⩽ x ⩽ 6.0) at room temperature. Three phases (x = 3.0, 3.5, and 4.0) are identified based on the obtained Raman spectra. Only the K3phenanthrene phase is found to exhibit the superconducting transition at 5 K. The C-C stretching modes are observed to broaden and become disordered in K(x)phenanthrene with x = 2.0, 2.5, 6.0, indicating some molecular disorder in the metal intercalation process. This disorder is expected to influence the nonmetallic nature of these materials. The absence of metallic character in these nonsuperconducting phases is found from the calculated electronic structures based on the local density approximation. PMID:24655174

  14. Constraint on the potassium content for the superconductivity of potassium-intercalated phenanthrene

    SciTech Connect

    Huang, Qiao-Wei; Zhao, Xiao-Miao; Zhong, Guo-Hua; Zhang, Jiang; Zhang, Chao; Lin, Hai-Qing; Chen, Xiao-Jia

    2014-03-21

    Raman-scattering measurements were performed on K{sub x}phenanthrene (0 ⩽ x ⩽ 6.0) at room temperature. Three phases (x = 3.0, 3.5, and 4.0) are identified based on the obtained Raman spectra. Only the K{sub 3}phenanthrene phase is found to exhibit the superconducting transition at 5 K. The C–C stretching modes are observed to broaden and become disordered in K{sub x}phenanthrene with x = 2.0, 2.5, 6.0, indicating some molecular disorder in the metal intercalation process. This disorder is expected to influence the nonmetallic nature of these materials. The absence of metallic character in these nonsuperconducting phases is found from the calculated electronic structures based on the local density approximation.

  15. Acoustic studies of ternary mixture phenanthrene toluene heptane as a model of natural flocculating system

    NASA Astrophysics Data System (ADS)

    Bucek, M.; Marczak, W.

    2008-02-01

    Complexity of natural systems causes that results of experimental studies are often ambiguous and extremely unrewarding in interpretation. To overcome this difficulty, relative simple model systems may be investigated in order to provide physical grounds for further discussion. This study deals with adiabatic compressibility of liquid ternary system consisting of phenanthrene, toluene and heptane. Increase of heptane concentration in the mixture changes considerably the partial compressibility of phenanthrene, from common positive value in pure toluene up to clearly negative ones. This is most probably because of self-association of phenanthrene due to strong London forces. Heptane seems to promote the self-association. These feature of the investigated system suggests its usefulness in studies of flocculation of asphaltenes from crude oils.

  16. Toxicity of sediment-associated pyrene and phenanthrene to Limnodrilus hoffmeisteri (Oligochaeta: Tubificidae)

    SciTech Connect

    Lotufo, G.R.; Fleeger, J.W.

    1996-09-01

    Acute and sublethal toxicities of sediment-spiked pyrene and phenanthrene to Limnodrilus hoffmeisteri Cleparede were investigated. Phenanthrene was acutely toxic at high sediment concentrations (10-d median lethal concentration of 297.5 {micro}g g{sup {minus}1}; 252.2--348.3, 95% confidence interval [Cl]). Pyrene was not acutely toxic, even at concentrations as high as 841 {micro}g g{sup {minus}1}. A significant impact of pyrene and phenanthrene on the feeding activity of L. hoffmeisteri was demonstrated through daily collection of egested fecal material during 5- and 10-d experiments. A short (5-d) exposure detected toxic effects more efficiently than a 10-d exposure, yielding IC25 values (estimated concentration causing a 25% reduction of measured endpoint in relation to the control[s]) of 58.9 {micro}g g{sup {minus}1} (32.1--89.4, 95% CI) for pyrene and 28.4 {micro}g g{sup {minus}1} (10.0--41.3, 95% CI) for phenanthrene. Effects on burrowing behavior and reproduction were assessed in a 28-d sediment exposure. Low burrowing avoidance (< 25%) was detected in high phenanthrene concentrations (143--612 {micro}g g{sup {minus}1}) but was not detected with pyrene. Offspring production was significantly reduced in dosed sediments yielding IC25 values of 59.1 {micro}g g{sup {minus}1} (38.3--112.5, 95% CI) for pyrene and 40.5 {micro}g g{sup {minus}1} (12.1--165.5, 955 CI) for phenanthrene. Decreases in egestion rates in the presence of nonpolar contaminants should be quantified when investigating the effects of bioturbation by deposit feeders on the flux of contaminants from sediment into the water column.

  17. Uptake and elimination of (9-/sup 14/C)phenanthrene in the turkey wing mussel (Arca zebra)

    SciTech Connect

    Solbakken, J.E.; Knap, A.H.; Searle, C.E.; Palmork, K.H.

    1983-04-01

    Turkey wing mussels of both sexes were collected from Harrington Sound, Bermuda and dosed after a week-long acclimation period with (9-/sup 14/C)phenanthrene (714 MBq/mmol). They were transferred into 8 liters of seawater containing 8 ..mu..g of labelled phenanthrene. Results show that the accumulation of labelled phenanthrene in the turkey wing mussel was very low compared to that found in other species. In the hepatopancreas, the uptake of phenanthrene based on the water concentration was only 4% of the corresponding value found in the calico clam (Macrocallista maculata) inhabiting the same area. In comparison, the uptake of phenanthrene in a temperate mollusc such as the horse mussel (Modiola modiolus) was also considerably higher than in the turkey wing (approx. 4 times). It therefore seems likely that these are due to species variations rather than environmental variations between subtropical and temperate areas. (JMT)

  18. Effects of root exudates on the leachability, distribution, and bioavailability of phenanthrene and pyrene from mangrove sediments.

    PubMed

    Jia, Hui; Lu, Haoliang; Liu, Jingchun; Li, Jian; Dai, Minyue; Yan, Chongling

    2016-03-01

    In this study, column leaching experiments were used to evaluate the leachability, distribution and bioavailability of phenanthrene and pyrene by root exudates from contaminated mangrove sediments. We observed that root exudates significantly promoted the release and enhanced the bioavailability of phenanthrene and pyrene from sediment columns. The concentration of phenanthrene and pyrene and cumulative content released from the analyzed sediment samples following root exudate rinsing decreased in the following order: citric acid > oxalic acid > malic acid. After elution, the total concentrations of phenanthrene and pyrene in sediment layers followed a descending order of bottom (9-12 cm) > middle (5-7 cm) > top (0-3 cm). Furthermore, a positive correlation between leachate pH values and PAH concentrations of the leachate was found. Consequently, the addition of root exudates can increase the leachability and bioavailability of phenanthrene and pyrene. PMID:26573317

  19. Van der Waals density functional study of the structural and electronic properties of La-doped phenanthrene

    SciTech Connect

    Yan, Xun-Wang; Faculty of Physics and Electronic Technology, Hubei University, Wuhan 430062; State Key Laboratory of Theoretical Physics, Institute of Theoretical Physics, Chinese Academy of Science, Beijing 100190, China and School of Physics and Electrical Engineering, Anyang Normal University, Henan 455000 ; Huang, Zhongbing; Faculty of Physics and Electronic Technology, Hubei University, Wuhan 430062 ; Lin, Hai-Qing

    2013-11-28

    By the first principle calculations based on the van der Waals density functional theory, we study the crystal structures and electronic properties of La-doped phenanthrene. Two stable atomic geometries of La{sub 1}phenanthrene are obtained by relaxation of atomic positions from various initial structures. The structure-I is a metal with two energy bands crossing the Fermi level, while the structure-II displays a semiconducting state with an energy gap of 0.15 eV, which has an energy gain of 0.42 eV per unit cell compared to the structure-I. The most striking feature of La{sub 1}phenanthrene is that La 5d electrons make a significant contribution to the total density of state around the Fermi level, which is distinct from potassium doped phenanthrene and picene. Our findings provide an important foundation for the understanding of superconductivity in La-doped phenanthrene.

  20. Improving the simulation of vibrationally resolved electronic spectra of phenanthrene: A computational Investigation

    NASA Astrophysics Data System (ADS)

    Pang, Min; Yang, Pan; Shen, Wei; Li, Ming; He, Rongxing

    2015-05-01

    Based on the density functional theory and its time-dependent extension, the properties of the ground and the first excited states of phenanthrene were calculated. In harmonic and anharmonic approximations, the well-resolved absorption and emission spectra of phenanthrene were simulated using the Franck-Condon approximation combined with the Herzberg-Teller and Duschinsky effects, and the results reproduced the experimental spectra very well. The mirror symmetry breakdown between absorption and emission spectra is induced mainly from the Herzberg-Teller effect and Duschinsky mode mixing. Moreover, most of the vibrational modes were tentatively assigned and compared with the experiment.

  1. Synthesis and Luminescent Properties of Poly(9-(3-vinyl-phenyl)-phenanthrene).

    PubMed

    Yang, Garam; Lee, Hayoon; Lee, Suji; Jung, Hyocheol; Shin, Hwangyu; Lee, Jaehyun; Park, Jongwook

    2016-02-01

    Recently, interest of polymer light-emitting diode (PLED) fabricated from conjugated polymer has augmented because PLED has advantage property that is well-suited to flexible lighting and solution processed device. In this presentation, we suggest a new polymer host based on phenanthrene, poly(9-(3-Vinyl-phenyl)-phenanthrene) (PVPP). It can be easily synthesized through simple synthetic methods which are Suzuki and Wittig reactions. PVPP film can be obtained from spin coating with solution used by common solvent. It exhibited PL maximum value of 381 nm and broad PL spectrum. Energy transfer smoothly occurred when the three dopants for green, red and yellow were used in PVPP. PMID:27433663

  2. Reaction of phenanthrene with tert-butylating agents under Friedel-Craft conditions

    SciTech Connect

    Pozdnyakovich, Yu.V.

    1988-10-20

    The alkylation of phenanthrene with tert-butyl alcohol in the presence of trifluoroacetic acid or with tert-butyl chloride, catalyzed by the TiCl/sub 4/, FeCl/sub 3/-CH/sub 3/NO/sub 2/, and AlCl/sub 3/-CH/sub 3/NO/sub 2/, leads to formation of 2- and 3-tert-butylphenanthrene and also 2,6-, 2,7-, and 3,6-di-tert-butylphenanthrene. The exhaustive alkylation of phenanthrene leads to the formation of the above-mentioned isomeric di-tert-butylphenanthrenes, the ratios of which depend on the nature of the catalyst.

  3. Complete Genome Sequence of a Phenanthrene Degrader, Burkholderia sp. HB-1 (NBRC 110738)

    PubMed Central

    Moriya, Azusa; Kato, Hiromi; Ogawa, Natsumi; Nagata, Yuji; Tsuda, Masataka

    2015-01-01

    The phenanthrene-degrading Burkholderia sp. HB-1 was isolated from a phenanthrene-enrichment culture seeded with a pristine farm soil sample. We report the complete genome sequence of HB-1, which has been deposited to the stock culture (NBRC 110738) at Biological Resource Center, National Institute of Technology and Evaluation (NITE), Tokyo, Japan. The genome of strain HB-1 comprises two circular chromosomes of 4.1 Mb and 3.1 Mb. The finishing was facilitated by the computational tools GenoFinisher, AceFileViewer, and ShortReadManager. PMID:26543118

  4. A Novel Phenanthrene Dioxygenase from Nocardioides sp. Strain KP7: Expression in Escherichia coli

    PubMed Central

    Saito, Atsushi; Iwabuchi, Tokuro; Harayama, Shigeaki

    2000-01-01

    Nocardioides sp. strain KP7 grows on phenanthrene but not on naphthalene. This organism degrades phenanthrene via 1-hydroxy-2-naphthoate, o-phthalate, and protocatechuate. The genes responsible for the degradation of phenanthrene to o-phthalate (phd) were found by Southern hybridization to reside on the chromosome. A 10.6-kb DNA fragment containing eight phd genes was cloned and sequenced. The phdA, phdB, phdC, and phdD genes, which encode the α and β subunits of the oxygenase component, a ferredoxin, and a ferredoxin reductase, respectively, of phenanthrene dioxygenase were identified. The gene cluster, phdAB, was located 8.3 kb downstream of the previously characterized phdK gene, which encodes 2-carboxybenzaldehyde dehydrogenase. The phdCD gene cluster was located 2.9 kb downstream of the phdB gene. PhdA and PhdB exhibited moderate (less than 60%) sequence identity to the α and β subunits of other ring-hydroxylating dioxygenases. The PhdC sequence showed features of a [3Fe-4S] or [4Fe-4S] type of ferredoxin, not of the [2Fe-2S] type of ferredoxin that has been found in most of the reported ring-hydroxylating dioxygenases. PhdD also showed moderate (less than 40%) sequence identity to known reductases. The phdABCD genes were expressed poorly in Escherichia coli, even when placed under the control of strong promoters. The introduction of a Shine-Dalgarno sequence upstream of each initiation codon of the phdABCD genes improved their expression in E. coli. E. coli cells carrying phdBCD or phdACD exhibited no phenanthrene-degrading activity, and those carrying phdABD or phdABC exhibited phenanthrene-degrading activity which was significantly less than that in cells carrying the phdABCD genes. It was thus concluded that all of the phdABCD genes are necessary for the efficient expression of phenanthrene-degrading activity. The genetic organization of the phd genes, the phylogenetically diverged positions of these genes, and an unusual type of ferredoxin component

  5. Complexation-flocculation combined with microwave-assisted headspace solid-phase microextraction in determining the binding constants of hydrophobic organic pollutants to dissolved humic substances.

    PubMed

    Hsieh, Ping-Chieh; Lee, Chon-Lin; Jen, Jen-Fon; Chang, Kuei-Chen

    2015-02-21

    The binding constants, KDOC, of selected polycyclic aromatic hydrocarbons (PAHs)-phenanthrene, anthracene, fluoranthene, and pyrene-to dissolved humic substances (DHS) were determined by complexation-flocculation combined with microwave-assisted headspace solid-phase microextraction (CF-MA-HS-SPME). The results obtained are comparable with KDOC data reported in the literature. No disruption of the PAH to DHS binding equilibrium was observed during the complexation-flocculation process. The present study, which is the first to determine KDOC by CF-MA-HS-SPME, provides an alternative approach to determine the KDOC of PAHs. CF-MA-HS-SPME provides some advantages over other methods, such as no limitation of fluorescent compounds, greater determination speed, and the capability of measuring various compounds simultaneously. PMID:25568896

  6. Syntheses and Chemosensory of Anthracene and Phenanthrene Bisimide Derivatives

    NASA Technical Reports Server (NTRS)

    Bogusz, Zachary A.

    2004-01-01

    As the present technology of biochemical weapons advances, it is essential for science to attempt to prepare our nation for such an occurrence. Various areas of current research are devoted to precautionary measures and potential antidotes for national security. A practical application of these precautions would be the development of a chemical capable of detecting harmful gas. The benefits of being capable to synthesis a chemical compound that would warn and identify potentially deadly gases would ensure a higher level of safety. The chemicals in question can be generalized as bisimide anthracene derivatives. The idea behind these compounds is that in the presence of certain nerve gases, the compound will actually fluoresce, giving an indication that there is a strong likelihood of the presence of a nerve gas and ensure the proper precautionary measures are taken. The fluorescence is due to the quenching of an electric proton transfer within the structure of the molecule. The system proves to be very unique on account of the fact that the fluorescence can be "turned off" by reducing the system. By utilizing the synthesis designed by Dr. Faysal Ilhan, four distinct compounds can be synthesized through photochemical reactions involving para- and ortho- diketones. The photochemistry involved is very modem and much research is being devoted to fully understanding the possibilities and alternative applications of such materials. and meta-nitro anthracene bisimide (ABI-NO2), the amine of each (ABI-NH2), a para- and meta-nitro phenanthrene bisimjde (PBI-NO2), and the amine of each (PBI-NH2). Upon synthesizing these distinct compounds, I must then purify and analyze them in order to obtain any relevant trends, behaviors, and characteristics. The chemical composition analyses that will be conducted are the procedures taken by Dr. Daniel Tyson on previous experiments. The results generated from the data will point further research in the correct direction and hopefully

  7. Comparative impact of cadmium on two phenanthrene-degrading bacteria isolated from cadmium and phenanthrene co-contaminated soil in China.

    PubMed

    Xiao, Jiajun; Guo, Linjun; Wang, Shipeng; Lu, Yitong

    2010-02-15

    Alcaligenes faecalis strain J08 and Brevundimonas sp. strain X08 were isolated from soils co-contaminated by cadmium (Cd) and polycyclic aromatic hydrocarbons (PAHs) in Northeast China. The two strains of bacteria were identified by phenotypic tests and 16S rDNA. Different Cd treatments (0.01 mM, 0.1mM, 0.5mM) showed no significant influence (p>0.05) on the biodegradation of phenanthrene by A. faecalis strain J08. Brevundimonas sp. strain X08 also presented no significant differences in the biodegradation of phenanthrene in Cd treatments (0.01 mM, 0.1mM). The growth of Brevundimonas sp. strain X08 was prohibited significantly (p<0.05) by Cd in the concentration of 0.5mM, but the biodegradation of phenanthrene in this group was not impaired. The specific biodegradation rate of Brevundimonas sp. strain X08 in the 0.5mM Cd group was significantly (p<0.05) higher than rates in other Cd treatments (0mM, 0.01 mM, 0.1mM). PMID:19853994

  8. Evidence for strong but dynamic iron-humic colloidal associations in humic-rich coastal waters.

    PubMed

    Batchelli, Silvia; Muller, François L L; Chang, Kuei-Chen; Lee, Chon-Lin

    2010-11-15

    This study investigated the physicochemical forms of dissolved iron in the coastal plume (salinity = 28-35) of a small river draining a peat-rich catchment. Speciation information was obtained through a combination of fractionation by crossflow filtration (CFF) along with voltammetric detection of either naturally occurring iron-humic complexes (July survey) or known, synthetic complexes (September survey) formed by titrating the samples with the competing ligand 2-(2-thiazolylazo)-p-cresol (TAC). The majority of colloidal iron (>5000 Da) was present as iron-humic complexes supplied by the river and showing uniform conditional stability constants throughout the plume (log K′(Fe′HS) = 11.3 ± 0.1, i.e. log K(Fe₃+HS) = 21.3 ± 0.1). Noncolloidal or soluble iron was strongly complexed to ligands of marine origin with log K′(Fe′HS) = 11.9 ± 0.1. Equilibrium of the total iron pool with the added TAC ligand was achieved in all but the highest salinity sample, albeit more slowly for colloidal than for soluble iron. In addition, measurements of humic like fluorescence suggested that the conformation of colloids could change over time as a result of dissociation of the iron-humic associations. These results are consistent with the concept that iron in coastal waters is strongly but reversibly bound to humic substances and therefore may be available for complexation by siderophore-type ligands released by microorganisms. PMID:20964358

  9. Tritium Enrichment in the Hydration Sphere of Humic Substances

    SciTech Connect

    Wierczinski, Birgit; Muellen, Guenther; Tuerler, Andreas

    2005-07-15

    Humic and fulvic acid can be combined under the term 'humic substances' and are natural substances with a complex structure. The structural details are not known, however, due to the functional groups present in these compounds the formation of hydrogen bonds is easily attained. Several humic substances were investigated for their potential use as compounds, which are applicable for tritium enrichment from aqueous solution. For comparison a simple compound, malonic acid, representing only few functional groups was investigated. The experiments were performed using a cryosublimation apparatus, which was run well below equilibrium vapor pressure to avoid any isotope fractionation of HTO and H{sub 2}O. A higher enrichment factor was found for natural humic acid compared to fulvic acid, however, no enrichment could be found for a synthetic humic acid and malonic acid. Interpretation of the results is difficult since no detailed information on the chemical structure of humic substances is known.

  10. Radio-labelled humic materials in migration studies

    SciTech Connect

    Carlsen, L.; Lassen, P.; Warwick, P.; Randall, A.

    1993-12-31

    Humic- and fulvic acids are able to complex polyvalent metal ions, e.g. radionuclides, leading to soluble complexes of significant strength, thereby decreasing the sorption of these compounds to soils and sediments. The interaction of humic materials with radionuclides may significantly influence the availability and transport of the latter in the environment. Typically, studies along these lines have focussed almost exclusively on the radionuclides, whereas the actual role of the humic material has been elucidated only indirectly. In order directly to study the behavior of the naturally occurring organic macro-molecules in relation to the environmental fate of radionuclides, radio-labelled humic- and fulvic acids can advantageously be applied. Radio-labels such as {sup 14}C and {sup 125}I have successfully been covalently incorporated in humic- and fulvic-acids. Labelling of humic substances as well as preliminary migration studies are discussed.

  11. Effectiveness of biostimulation through nutrient content on the bioremediation of phenanthrene contaminated soil.

    PubMed

    Kalantary, Roshanak Rezaei; Mohseni-Bandpi, Anoushiravan; Esrafili, Ali; Nasseri, Simin; Ashmagh, Fatemeh Rashid; Jorfi, Sahand; Ja'fari, Mahsa

    2014-01-01

    Bioremediation has shown its applicability for removal of polycyclic aromatic hydrocarbons (PAHs) from soil and sediments. In the present study, the effect of biostimulation on phenanthrene removal from contaminated soil via adding macro and/or micronutrients and trace elements was investigated. For these purposes three macro nutrients (as N, P and K), eight micronutrients (as Mg, S, Fe, Cl, Zn, Mn, Cu and Na) and four trace elements (as B, Mo, Co and Ni) in 11 mineral salts (MS) as variables were used. Placket-Burman statistical design was used to evaluate significance of variables (MS) in two levels of high and low. A consortium of adapted microorganisms with PAHs was used for inoculation to the soil slurry which was spiked with phenanthrene in concentration of 500 mg/kg soil. The optimal reduction resulted when a high level of macro nutrient in the range of 67-87% and low level of micro nutrient in the range of 12-32% were used with the nitrogen as the dominant macronutrient. The Pareto chart showed that NH4NO3 was the most effective variable in this experiment. The effect of elements on phenanthrene biodegradation showed following sequence as N > K > P > Cl > Na > Mg. Effectiveness of the other elements in all runs was less than 1%. The type and concentration of nutrient can play an important role in biodegradation of phenanthrene. Biostimulation with suitable combination of nutrient can enhance bioremediation of PAHs contaminated soils. PMID:25610635

  12. Novel Phenanthrene-Degrading Bacteria Identified by DNA-Stable Isotope Probing

    PubMed Central

    Luo, Chunling; Zhang, Dayi; Zhang, Gan

    2015-01-01

    Microorganisms responsible for the degradation of phenanthrene in a clean forest soil sample were identified by DNA-based stable isotope probing (SIP). The soil was artificially amended with either 12C- or 13C-labeled phenanthrene, and soil DNA was extracted on days 3, 6 and 9. Terminal restriction fragment length polymorphism (TRFLP) results revealed that the fragments of 219- and 241-bp in HaeIII digests were distributed throughout the gradient profile at three different sampling time points, and both fragments were more dominant in the heavy fractions of the samples exposed to the 13C-labeled contaminant. 16S rRNA sequencing of the 13C-enriched fraction suggested that Acidobacterium spp. within the class Acidobacteria, and Collimonas spp. within the class Betaproteobacteria, were directly involved in the uptake and degradation of phenanthrene at different times. To our knowledge, this is the first report that the genus Collimonas has the ability to degrade PAHs. Two PAH-RHDα genes were identified in 13C-labeled DNA. However, isolation of pure cultures indicated that strains of Staphylococcus sp. PHE-3, Pseudomonas sp. PHE-1, and Pseudomonas sp. PHE-2 in the soil had high phenanthrene-degrading ability. This emphasizes the role of a culture-independent method in the functional understanding of microbial communities in situ. PMID:26098417

  13. Identification and quantification of ozonation products of anthracene and phenanthrene adsorbed on silica particles

    NASA Astrophysics Data System (ADS)

    Perraudin, Emilie; Budzinski, Hélène; Villenave, Eric

    Primary products of the reactions of gas-phase ozone with anthracene and phenanthrene adsorbed on silica model particles have been investigated. Silica was selected as proxy for mineral atmospheric particles. The particles, coated with anthracene or phenanthrene and placed on a filter, were exposed in a reaction cell to a gaseous ozone flow. Ozone concentration was constant ((6.0±0.6)×10 13 molecule cm -3) during the experiments. Anthracene, phenanthrene and their ozonation products were then extracted by focused microwave-assisted extraction or fluid pressurized extraction and analyzed by gas chromatography coupled to mass spectrometry. Anthraquinone and anthrone on the one hand, and 1,1'-biphenyl-2,2'-dicarboxaldehyde on the other hand were identified as the products of anthracene and phenanthrene, respectively and quantified versus time of ozone exposure. This kinetical approach allowed to show that anthraquinone, anthrone and 1,1'-biphenyl-2,2'-dicarboxaldehyde are the primary products of the studied reactions, and to determine their formation yields (respectively, 0.42±0.04, 0.056±0.005 and 1.0±0.4).

  14. COSOLVENT EFFECTS ON PHENANTHRENE SORPTION-DESORPTION ON A FRESH-WATER SEDIMENT

    EPA Science Inventory

    This study evaluated the effects of the water-miscible cosolvent methanol on the sorption-desorption of phenanthrene by the natural organic matter (NOM) of a fresh-water sediment. A biphasic pattern was observed in the relationship between the log of the carbon-normalized sorpti...

  15. Activated carbon from biochar: influence of its physicochemical properties on the sorption characteristics of phenanthrene.

    PubMed

    Park, Junyeong; Hung, Ivan; Gan, Zhehong; Rojas, Orlando J; Lim, Kwang Hun; Park, Sunkyu

    2013-12-01

    The relationship between physicochemical properties of biochar-based activated carbons and its adsorption was investigated using an aromatic model compound, phenanthrene. Solid-state (13)C NMR analysis indicated more condensed aromatic structures when pyrolysis temperature increased or after activation process induced. The increasing aromaticity and non-protonated carbon fraction of the activated biochar treated at 300°C amounted to 14.7% and 24.0%, respectively, compared to 7.4% and 4.4% for biochar treated at 700°C. The surface area and pore volume were reduced with the increase in pyrolysis temperature, but increased after activation. Surface characteristics correlated with the initial sorption rate and equilibrium concentration of phenanthrene, but not with the aromaticity. Solid-state (2)H NMR for phenanthrene-d10 saturated activated biochars, however, showed substantial difference in molecular mobility, which might be due to the high aromaticity of the activated biochars. Overall, these results provide an opportunity to manipulate the characteristics of biomass-based adsorbents based on the application needs. PMID:24128401

  16. Fluorene and Phenanthrene Uptake and Accumulation by Wheat, Alfalfa and Sunflower from the Contaminated Soil.

    PubMed

    Salehi-Lisar, Seyed Yahya; Deljoo, Somaye; Harzandi, Ahmad Mosen

    2015-01-01

    Polycyclic Aromatic Hydrocarbons (PAHs) are diverse organic contaminants released into the environment by both natural and anthropogenic activities. These compounds have negative impacts on plants growth and development. Although there are many reports on their existence in different parts of plant, their uptake and translocation pathways and mechanisms are not well understood yet. This paper highlights the uptake, translocation and accumulation of PAHs by wheat, sunflower and alfalfa through an experimental study under controlled conditions. Seeds were cultivated in a soil containing 50 mg/kg of phenanthrene and fluorene and their concentrations in plants roots and shoots were determined using a gas chromatograph after 7 and 14 days. The results showed that phenanthrene and fluorene concentrations in the treated plants were increased over the time. PAHs bioavailability was time and species dependent and generally, phenanthrene uptake and translocation was faster than that of fluorene, probably due to their higher Kow. Fluorene tended to accumulate in roots, but phenanthrene was transported to aerial parts of plants. PMID:25950194

  17. Mechanistic Studies on the Dibenzofuran Formation from Phenanthrene, Fluorene and 9–Fluorenone

    PubMed Central

    Li, Shanqing; Zhang, Qingzhu

    2015-01-01

    We carried out molecular orbital theory calculations for the homogeneous gas‑phase formation of dibenzofuran from phenanthrene, fluorene, 9-methylfluorene and 9-fluorenone. Dibenzofuran will be formed if ∙OH adds to C8a, and the order of reactivity follows as 9-fluorenone > 9-methylfluorene > fluorene > phenanthrene. The oxidations initiated by ClO∙ are more favorable processes, considering that the standard reaction Gibbs energies are at least 21.63 kcal/mol lower than those of the equivalent reactions initiated by ∙OH. The adding of ∙OH and then O2 to phenanthrene is a more favorable route than adding ∙OH to C8a of phenanthrene, when considering the greater reaction extent. The reaction channel from fluorene and O2 to 9-fluorenone and H2O seems very important, not only because it contains only three elementary reactions, but because the standard reaction Gibbs energies are lower than −80.07 kcal/mol. PMID:25756381

  18. Distribution of phenanthrene between soil and an aqueous phase in the presence of anionic micelle-like amphiphilic polyurethane particles.

    PubMed

    Lee, Kangtaek; Choi, Heon-Sik; Kim, Ju-Young; Ahn, Ik-Sung

    2003-12-12

    Sorption of micelle-like amphiphilic polyurethane (APU) particles to soil was studied and compared to that of a model anionic surfactant, sodium dodecyl sulfate (SDS). Three types of APU particles with different hydrophobicity were synthesized from urethane acrylate anionomers (UAA) and used in this study. Due to the chemically cross-linked structure, APU exhibited less sorption to the soil than SDS and a greater reduction in the sorption of phenanthrene, a model soil contaminant, to the soil was observed in the presence of APU than SDS even though the solubility of phenanthrene was higher in the presence of SDS than APU. A mathematical model was developed to describe the phenanthrene distribution between soil and an aqueous phase containing APU particles. The sorption of phenanthrene to the test soil could be well described by Linear isotherm. APU sorption to the soil was successfully described by Langmuir and Freundlich isotherms. The partition of phenanthrene between water and APU were successfully explained with a single partition coefficient. The model, which accounts for the limited solubilization of phenanthrene in sorbed APU particles, successfully described the experimental data for the distribution of phenanthrene between the soil and the aqueous phase in the presence of APU. PMID:14623427

  19. Effects of surfactant addition on the biomineralization and microbial toxicity of phenanthrene.

    PubMed

    Bramwell, D P; Laha, S

    2000-01-01

    Surfactants are known to increase the apparent aqueous solubility of polycyclic aromatic hydrocarbons and may thereby enhance their bioavailability. In this study the effects of four surfactants on the mineralization of phenanthrene by Pseudomonas aeruginosa in liquid culture and in soil-water suspensions was studied in batch reactors over a 15-week study period. In the absence of surfactant, liquid cultures mineralized approximately 50% of the phenanthrene added within seven weeks following a one-week lag period and an initial mineralization rate of 0.04 mg/d. Mineralization in soil-water suspensions proceeded without any measurable lag period. The initial mineralization rate was lower (0.006 mg/d), but mineralization continued to >70% over the fifteen week period. In general, the addition of very low concentrations of surfactant (<0.001%) to liquid cultures did not impact mineralization significantly. At higher surfactant concentrations (>CMC) all surfactants were seen to be inhibitory. In soil-water systems, the rate of phenanthrene mineralization was decreased even at surfactant doses that did not produce significant solubilization. In summary, none of the surfactants enhanced the mineralization of phenanthrene by P. aeruginosa in liquid culture or in soil-water suspensions. In order to rank surfactant toxicity, microbial toxicity tests were performed measuring the light output of bioluminescent bacteria as affected by the presence of surfactants. Additional toxicity testing indicated that the presence of solubilized phenanthrene increased the toxicity of the surfactant by a 100-fold suggesting that the toxicity of solubilized substrate needs also to be considered in the application of surfactant-amended remediation. PMID:11432584

  20. Conformational arrangement of dissolved humic substances. Influence of solution composition on association of humic molecules

    SciTech Connect

    Conte, P.; Piccolo, A.

    1999-05-15

    The characteristics and quantity of humic substances greatly affects the environmental fate of organic pollutants in soils and natural waters. The authors studied the conformational changes of humic and fulvic acids of different chemical nature by high-pressure size-exclusion chromatography (HPSEC) after dissolution in mobile phases differing in composition but constant in ionic strength. Modification of a neutral mobile phase by addition of methanol, hydrochloric acid, and acetic acid produced, in the order, a progressive decrease in molecular size. Size diminishing was shown by increasingly larger elution volumes at a refractive index detector and by concomitant reductions of peaks absorbance at a UV-vis detector. The decrease of molecular absorptivity (the phenomenon of hypochromism) proved that size reduction of dissolved humic substances was due more to disruption of an only apparent high-molecular-size arrangement into several smaller molecular associations than to coiling down of a macromolecular structure. The most significant conformational changes occurred in acidic mobile phases where hydrogen bondings formation was induced, suggesting that the large and easily disruptable humic conformation was held together predominantly by weak hydrophobic forces.

  1. Np(V) reduction by humic acid: contribution of reduced sulfur functionalities to the redox behavior of humic acid.

    PubMed

    Schmeide, K; Sachs, S; Bernhard, G

    2012-03-01

    The role of sulfur-containing functional groups in humic acids for the Np(V) reduction in aqueous solution has been studied with the objective to specify individual processes contributing to the overall redox activity of humic substances. For this, humic acid model substances type M1-S containing different amounts of sulfur (1.9, 3.9, 6.9 wt.%) were applied. The sulfur functionalities in these humic acids are dominated by reduced-sulfur species, such as thiols, dialkylsulfides and/or disulfides. The Np(V) reduction behavior of these humic acids has been studied in comparison to that of the sulfur-free humic acid type M1 at pH 5.0, 7.0 and 9.0 under anaerobic conditions by means of batch experiments. For Np redox speciation in solution, solvent extraction and ultrafiltration were applied. In addition, redox potentials of the sample solutions were monitored. At pH 5.0, both rate and extent of Np(V) to Np(IV) reduction were found to increase with increasing sulfur content of the humic acids. At pH 7.0 and 9.0, sulfur functional groups had only a slight influence on the reduction behavior of humic acid toward Np(V). Thus, in addition to quinoid moieties and non-quinoid phenolic OH groups, generally acknowledged as main redox-active sites in humic substances, sulfur functional groups have been identified as further redox-active moieties of humic substances being active especially in the slightly acidic pH range as shown for Np(V). Due to the low sulfur content of up to 2 wt.% in natural humic substances, their contribution to the total reducing capacity is smaller than that of the other redox-active functional groups. PMID:22285088

  2. Effect of humic substances on the flotation response of coal

    SciTech Connect

    Lai, R.W.; Wen, W.W. ); Okoh, J.M. )

    1989-01-01

    This study investigated the generation of humic substances from the coal and the coal surface, and evaluated the effect of humic substances on the surface property of coal. The humic substances in aqueous solution were readily adsorbed on the surface of fresh coal. The adsorption affects the surface hydrophobicity of the coal and, hence, the flotation recovery of coal. The adsorption of humic substances is maximum at neutral pH and diminishes toward both the alkaline pH and the acid pH. This effect is reflected in the flotation responses of the fresh coal. Solutions of humic substances were oxidized with oxygen gas and ozone. The oxidation of humic substances in solution resulted in an adsorption that greatly enhanced the hydrophilicity of the coal and thus impaired the floatability of the coal. On the other hand, the ozonation of humic substances in solution resulted in the decomposition of humic substances and an improvement in the flotation response of the coal. Direct oxidation and ozonation of coal surface decreased the hydrophobicity of the coal, which resulted in a decrease in the flotation response.

  3. Field evaluation of a humic product in Iowa corn fields

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The benefit to corn production of a humic product derived from lignite was evaluated for three years under otherwise conventional crop management in Iowa farmers’ fields. Humic material was applied as a liquid extract at a rate of 3 pints acre-1 (0.57 L ha-1), generally as a foliar spray along with ...

  4. [Effect of organic composition of humic acids on Enterobacteria multiplication].

    PubMed

    Buzoleva, L S; Sidorenko, M L

    2001-01-01

    Enterobacteria have been found to be capable of active multiplication in humic acids isolated from bentonite clays containing carbohydrates, lipids and proteins. Humic acids fractions have been found to be heterogeneous by their molecular weight and organic composition; consequently, they have been found to produce different influence in the multiplication of bacteria. PMID:11548272

  5. Surface-active properties of humic and sulfochlorohumic acids

    SciTech Connect

    Ryabova, I.N.; Mustafina, G.A.; Akkulova, Z.G.; Satymbaeva, A.S.

    2009-10-15

    The surface tension of alkaline solutions of humic acids and their sulfochloroderivatives, which are synthesized by sulfonation of chlorohumic acids isolated from coal chlorinated by the electrochemical method, is investigated. It is established that humic compounds possess weak surface activity. Basic adsorption parameters are calculated.

  6. Molecular structure in soil humic substances: The new view

    SciTech Connect

    Sutton, Rebecca; Sposito, Garrison

    2005-04-21

    A critical examination of published data obtained primarily from recent nuclear magnetic resonance spectroscopy, X-ray absorption near-edge structure spectroscopy, electrospray ionization-mass spectrometry, and pyrolysis studies reveals an evolving new view of the molecular structure of soil humic substances. According to the new view, humic substances are collections of diverse, relatively low molecular mass components forming dynamic associations stabilized by hydrophobic interactions and hydrogen bonds. These associations are capable of organizing into micellar structures in suitable aqueous environments. Humic components display contrasting molecular motional behavior and may be spatially segregated on a scale of nanometers. Within this new structural context, these components comprise any molecules intimately associated with a humic substance, such that they cannot be separated effectively by chemical or physical methods. Thus biomolecules strongly bound within humic fractions are by definition humic components, a conclusion that necessarily calls into question key biogeochemical pathways traditionally thought to be required for the formation of humic substances. Further research is needed to elucidate the intermolecular interactions that link humic components into supramolecular associations and to establish the pathways by which these associations emerge from the degradation of organic litter.

  7. Reduction in the earthworm metabolomic response after phenanthrene exposure in soils with high soil organic carbon content.

    PubMed

    McKelvie, Jennifer R; Whitfield Åslund, Melissa; Celejewski, Magda A; Simpson, André J; Simpson, Myrna J

    2013-04-01

    We evaluated the correlation between soil organic carbon (OC) content and metabolic responses of Eisenia fetida earthworms after exposure to phenanthrene (58 ± 3 mg/kg) spiked into seven artificial soils with OC contents ranging from 1 to 27% OC. Principal component analysis of (1)H nuclear magnetic resonance (NMR) spectra of aqueous extracts identified statistically significant differences in the metabolic profiles of control and phenanthrene-exposed E. fetida in the 1% OC soil only. Partial least squares analysis identified a metabolic response in the four soils with OC values ≤11% which was well correlated to estimated phenanthrene porewater concentrations. The results suggest that the higher sorption capability of high OC soils decreased the bioavailability of phenanthrene and the subsequent metabolic response of E. fetida. PMID:23337355

  8. Pyrrolidone - a new solvent for the methylation of humic acid

    USGS Publications Warehouse

    Wershaw, R. L.; Pinckney, D.J.; Booker, S.E.

    1975-01-01

    In the past, humic acid has been methylated by suspending it in a solution of diazomethane in diethyl ether, and degrading the partly methylated humic acid to release those parts of the molecule that were methylated. Only small fragments of the molecule have been identified by this technique. In the procedure described here the humic acid is dissolved in 2-pyrrolidone and methylated by the addition of diazomethane in diethyl ether and ethanol to the solution. Because the humic acid is completely dissolved in the reaction medium, disaggregation of the humic acid particles takes place and much more complete methylation is obtained. The methylated products may be fractionated by countercurrent distribution and analyzed by mass spectrometry.

  9. Effect of bioaugmentation to enhance phytoremediation for removal of phenanthrene and pyrene from soil with Sorghum and Onobrychis sativa

    PubMed Central

    2014-01-01

    The use of plants to remove Poly-aromatic-hydrocarbons (PAHs) from soil (phytoremediation) is emerging as a cost-effective method. Phytoremediation of contaminated soils can be promoted by the use of adding microorganisms with the potential of pollution biodegradation (bioaugmentation). In the present work, the effect of bacterial consortium was studied on the capability of Sorghum and Onobrychis sativa for the phytoremediation of soils contaminated with phenanthrene and pyrene. 1.5 kg of the contaminated soil in the ratio of 100 and 300 mg phenanthrene and/or pyrene per kg of dry soil was then transferred into each pot (nine modes). The removal efficiency of natural, phytoremediation and bioaugmentation, separately and combined, were evaluated. The samples were kept under field conditions, and the remaining concentrations of pyrene and phenanthrene were determined after 120 days. The rhizosphere as well as the microbial population of the soil was also determined. Results indicated that both plants were able to significantly remove pyrene and phenanthrene from the contaminated soil samples. Phytoremediation alone had the removal efficiency of about 63% and 74.5% for pyrene and phenanthrene respectively. In the combined mode, the removal efficiency dramatically increased, leading to pyrene and phenanthrene removal efficiencies of 74.1% and 85.02% for Onobrychis sativa and 73.84% and 85.2% for sorghum, respectively. According to the results from the present work, it can be concluded that Onobrychis sativa and sorghum are both efficient in removing pyrene and phenanthrene from contamination and bioaugmentation can significantly enhance the phytoremediation of soils contaminated with pyrene and phenanthrene by 22% and 16% respectively. PMID:24406158

  10. Humic substances as a mediator for microbially catalyzed metal reduction

    USGS Publications Warehouse

    Lovley, D.R.; Fraga, J.L.; Blunt-Harris, E. L.; Hayes, L.A.; Phillips, E.J.P.; Coates, J.D.

    1998-01-01

    The potential for humic substances to serve as a terminal electron acceptor in microbial respiration and to function as an electron shuttle between Fe(III)-reducing microorganisms and insoluble Fe(III) oxides was investigated. The Fe(III)-reducing microorganism Geobacter metallireducens conserved energy to support growth from electron transport to humics as evidenced by continued oxidation of acetate to carbon dioxide after as many as nine transfers in a medium with acetate as the electron donor and soil humic acids as the electron acceptor. Growth of G. metallireducens with poorly crystalline Fe(III) oxide as the electron acceptor was greatly stimulated by the addition of as little as 100 ??M of the humics analog, anthraquinone-2,6-disulfonate. Other quinones investigated, including lawsone, menadione, and anthraquinone-2-sulfonate, also stimulated Fe(III) oxide reduction. A wide phylogenetic diversity of microorganisms capable of Fe(III) reduction were also able to transfer electrons to humics. Microorganisms which can not reduce Fe(III) could not reduce humics. Humics stimulated the reduction of structural Fe(III) in clay and the crystalline Fe(III) forms, goethite and hematite. These results demonstrate that electron shuttling between Fe(III)-reducing microorganisms and Fe(III) via humics not only accelerates the microbial reduction of poorly crystalline Fe(III) oxide, but also can facilitate the reduction of Fe(III) forms that are not typically reduced by microorganisms in the absence of humics. Addition of humic substances to enhance electron shuttling between Fe(III)-reducing microorganisms and Fe(III) oxides may be a useful strategy to stimulate the remediation of soils and sediments contaminated with organic or metal pollutants.

  11. Digestive determinants of benzo[a]pyrene and phenanthrene bioaccumulation by a deposit-feeding polychaete

    SciTech Connect

    Penry, D.L.; Weston, D.P.

    1998-11-01

    The uptake of hydrophobic contaminants from ingested sediment can contribute significantly to body burdens of deposit feeders, and feeding behavior and digestive physiology can play important roles in bioaccumulation. The authors examined the uptake of polycyclic aromatic hydrocarbons (PAHs) by the deposit-feeding polychaete Abarenicola pacifica in experiments in which worms were first acclimated to low or high organic carbon sediments with 0.08 or 0.45% total organic carbon, respectively and then transferred to low or high organic carbon test sediments contaminated with radiolabeled phenanthrene or benzo[a]pyrene. Ingestion rate was measurements are essential in many types of bioaccumulation studies because differences in ingestion rates between sediment types may confound some traditional measures of bioavailability. Physiological acclimation to the low or high organic carbon sediments did not appear to affect PAH uptake from the test sediments, but acclimation did affect biotransformation capabilities, particularly for phenanthrene.

  12. Bioactive Phenanthrene and Bibenzyl Derivatives from the Stems of Dendrobium nobile.

    PubMed

    Zhou, Xue-Ming; Zheng, Cai-Juan; Gan, Li-She; Chen, Guang-Ying; Zhang, Xiao-Peng; Song, Xiao-Ping; Li, Gao-Nan; Sun, Chong-Ge

    2016-07-22

    A new enantiomeric pair of spirodiketones, (+)- and (-)-denobilone A (1 and 2), three new phenanthrene derivatives (3-5), and three new biphenanthrenes (22-24), along with 11 known phenanthrene derivatives (6-16), five known bibenzyl derivatives (17-21), and four known biphenanthrenes (25-28), were isolated from Dendrobium nobile. The structures of 1-5 and 22-24 were elucidated using comprehensive spectroscopic methods. (+)-Denobilone and (-)-denobilone A (1 and 2) were isolated as a pair of enantiomers by chiral HPLC. The absolute configurations of (+)- and (-)-denobilone A (1 and 2) were determined by comparing their experimental and calculated electronic circular dichroism spectra. The absolute configuration of denobilone B (3) was determined by X-ray crystallographic analysis. The inhibitory activities of all compounds against nine phytopathogenic fungi and three cancer cell lines were evaluated. PMID:27310249

  13. Impact of activated carbon, biochar and compost on the desorption and mineralization of phenanthrene in soil.

    PubMed

    Marchal, Geoffrey; Smith, Kilian E C; Rein, Arno; Winding, Anne; Wollensen de Jonge, Lis; Trapp, Stefan; Karlson, Ulrich G

    2013-10-01

    Sorption of PAHs to carbonaceous soil amendments reduces their dissolved concentrations, limiting toxicity but also potentially biodegradation. Therefore, the maximum abiotic desorption of freshly sorbed phenanthrene (≤5 mg kg(-1)) was measured in three soils amended with activated carbon (AC), biochar or compost. Total amounts of phenanthrene desorbed were similar between the different soils, but the amendment type had a large influence. Complete desorption was observed in the unamended and compost amended soils, but this reduced for biochar (41% desorbed) and AC (8% desorbed). Cumulative amounts mineralized were 28% for the unamended control, 19% for compost, 13% for biochar and 4% for AC. Therefore, the effects of the amendments in soil in reducing desorption were also reflected in the extents of mineralization. Modeling was used to analyze key processes, indicating that for the AC and charcoal treatments bacterial activity did not limit mineralization, but rather desorption into the dissolved phase. PMID:23871817

  14. Efficient adsorption of phenanthrene by simply synthesized hydrophobic MCM-41 molecular sieves

    NASA Astrophysics Data System (ADS)

    Hu, Yun; He, Yinyun; Wang, Xiaowen; Wei, Chaohai

    2014-08-01

    Hydrophobic molecular sieve MCM-41 including surfactant template was synthesized by a simple method. The adsorption properties of this material toward phenanthrene were studied. The effects of adsorbent dose and pH value on the adsorption process as well as the adsorption mechanism and reuse performance were investigated. The template-containing MCM-41 showed a significant adsorption for phenanthrene, due to its hydrophobicity created by the surfactant template in MCM-41. The solution pH had little effect on the adsorption capacity. The adsorption kinetic could be fitted well with pseudo-second-order kinetic model. The adsorption equilibrium was fitted well by the linear model, and the adsorption process followed the liquid/solid phase distribution mechanism. The thermodynamic results indicated that the adsorption was a spontaneous and exothermic process.

  15. Cytotoxic and anti-inflammatory activities of phenanthrenes from the medullae of Juncus effusus L.

    PubMed

    Ma, Wei; Zhang, Yue; Ding, Yun-Yun; Liu, Feng; Li, Ning

    2016-02-01

    Bioactivity guided phytochemical investigation of the ethanol extract of the medullae of Juncus effusus resulted in the isolation of two new phenanthrenes, 8-hydroxymethyl-2-hydroxyl-1-methyl-5-vinyl-9,10-dihydrophenanthrene (1), and 5-(1-methoxyethyl)-1-methyl-phenanthren-2,7-diol (2) together with 15 known phenanthrenoids (3-17). The chemical structures of 1 and 2 were established by a combination of spectroscopic techniques. Compounds 1-15 and 17 were evaluated for their cytotoxic activities against five human cancer cell lines (SHSY-5Y, SMMC-7721, HepG-2, Hela and MCF-7) by CCK-8 assay, and their anti-inflammatory activities were also evaluated by inhibition on NO production in LPS-activated murine macrophage RAW 264.7 cells. PMID:26584913

  16. The relationship between dissolved humic acids and soluble iron in estuaries

    NASA Technical Reports Server (NTRS)

    Fox, L. E.

    1984-01-01

    Dissolved humic acid and soluble iron appear to be chemically unassociated in estuaries despite their coincident removal. This conclusion is supported by differences in the aggregation kinetics of soluble iron and dissolved humic acid, the inability of extracted humic acid to stabilize laboratory preparations of ferric hydroxide, and decreasing ratios of humic acid carbon to soluble iron along the axes of some estuaries.

  17. Degradation of Phenanthrene and Anthracene by Cell Suspensions of Mycobacterium sp. Strain PYR-1

    PubMed Central

    Moody, Joanna D.; Freeman, James P.; Doerge, Daniel R.; Cerniglia, Carl E.

    2001-01-01

    Cultures of Mycobacterium sp. strain PYR-1 were dosed with anthracene or phenanthrene and after 14 days of incubation had degraded 92 and 90% of the added anthracene and phenanthrene, respectively. The metabolites were extracted and identified by UV-visible light absorption, high-pressure liquid chromatography retention times, mass spectrometry, 1H and 13C nuclear magnetic resonance spectrometry, and comparison to authentic compounds and literature data. Neutral-pH ethyl acetate extracts from anthracene-incubated cells showed four metabolites, identified as cis-1,2-dihydroxy-1,2-dihydroanthracene, 6,7-benzocoumarin, 1-methoxy-2-hydroxyanthracene, and 9,10-anthraquinone. A novel anthracene ring fission product was isolated from acidified culture media and was identified as 3-(2-carboxyvinyl)naphthalene-2-carboxylic acid. 6,7-Benzocoumarin was also found in that extract. When Mycobacterium sp. strain PYR-1 was grown in the presence of phenanthrene, three neutral metabolites were identified as cis- and trans-9,10-dihydroxy-9,10-dihydrophenanthrene and cis-3,4-dihydroxy-3,4-dihydrophenanthrene. Phenanthrene ring fission products, isolated from acid extracts, were identified as 2,2′-diphenic acid, 1-hydroxynaphthoic acid, and phthalic acid. The data point to the existence, next to already known routes for both gram-negative and gram-positive bacteria, of alternative pathways that might be due to the presence of different dioxygenases or to a relaxed specificity of the same dioxygenase for initial attack on polycyclic aromatic hydrocarbons. PMID:11282593

  18. A novel solubilization of phenanthrene using Winsor I microemulsion-based sodium castor oil sulfate.

    PubMed

    Zhao, Baowei; Zhu, Lizhong; Gao, Yanzheng

    2005-03-17

    Problems associated with polycyclic aromatic hydrocarbons (PAHs) contaminated site in environmental media have received increasing attention. Ex situ soil washing is commonly used for treating contaminated soils by separating the most contaminated fraction of the soil for disposal. Surfactant-enhanced soil washing is being considered with increasing frequency to actually achieve soil-contaminant separation. In this research, a novel solubilization of phenanthrene and extraction of phenanthrene from spiked soil by sodium castor oil sulfate (SCOS) microemulsion was presented and compared with the conventional surfactants, Triton X-100 (TX100), Tween 80 (TW80), Brij35, sodium dodecylbenzene sulfonate (SDBS) and sodium dodecyl sulfate (SDS). Unlike conventional surfactants, SCOS forms stable microemulsion in water and thus behaves much like a separate bulk phase in concentrating organic solutes. The extent of solubility enhancement is linearly proportional to the concentration of SCOS microemulsion, in contrast with the effect of a conventional surfactant in which a sharp inflection occurs in the vicinity of the measured critical micelle concentration. SCOS microemulsion exhibits the largest mass solubilization ratio among the selected surface active agents (SAAs) in both soil-free system and soil-water system. The partitioning coefficients of phenanthrene between the emulsified phase and the aqueous phase, Kem, is slightly larger than those between the micellar pseudo phase and the aqueous phase, Kmc. The extraction experiments demonstrate high and fast desorption of phenanthrene from spiked soil by SCOS microemulsion perhaps due to its high solubilization capacity compared with the conventional surfactant solutions. The results show that SCOS could be an attractive alternative to synthetic surfactants in ex situ washing for PAH-contaminated soils. PMID:15752867

  19. trans-Chlorido(phenanthren-9-yl)bis­(triphenyl­phosphane)nickel(II)

    PubMed Central

    Lei, Xiangyang; Obregon, Karla A.

    2011-01-01

    The title compound, [Ni(C14H9)Cl(C18H15P)2], was synthesized from the reaction between 9-chloro­phenanthrene, NiCl2·6H2O and triphenyl­phosphane in ethanol. The bond angles around the NiII atom indicate that it exists in a slightly distorted square-planar geometry. PMID:22058872

  20. Lability of copper bound to humic acid.

    PubMed

    Mao, Lingchen; Young, Scott D; Bailey, Elizabeth H

    2015-07-01

    Geochemical speciation models generally include the assumption that all metal bound to humic acid and fulvic acid (HA, FA) is labile. However, in the current study, we determined the presence of a soluble 'non-labile' Cu fraction bound to HA extracted from grassland and peat soils. This was quantified by determining isotopically-exchangeable Cu (E-value) and EDTA-extraction of HA-bound Cu, separated by size-exclusion chromatography (SEC) and assayed by coupled ICP-MS. Evidence of time-dependent Cu fixation by HA was found during the course of an incubation study (160 d); up to 50% of dissolved HA-bound Cu was not isotopically exchangeable. This result was supported by extraction with EDTA where approximately 40% of Cu remained bound to HA despite dissolution in 0.05 M Na2-EDTA. The presence of a substantial non-labile metal fraction held by HA challenges the assumption of wholly reversible equilibrium which is central to current geochemical models of metal binding to humic substances. PMID:25863164

  1. Competitive metabolism of naphthalene, methylnaphthalenes, and fluorene by phenanthrene-degrading pseudomonads.

    PubMed Central

    Stringfellow, W T; Aitken, M D

    1995-01-01

    Polynuclear aromatic hydrocarbons (PAHs) typically exist as complex mixtures in contaminated soils, yet little is known about the biodegradation of PAHs in mixtures. We have isolated two physiologically diverse bacteria, Pseudomonas stutzeri P-16 and P. saccharophila P-15, from a creosote-contaminated soil by enrichment on phenanthrene as the sole carbon source and studied their ability to metabolize several other two- and three-ring PAHs. Naphthalene, 1-methylnaphthalene, and 2-methylnaphthalene served as growth substrates for both organisms, while fluorene was only cometabolized. We also studied the effects of these compounds on initial rates of phenanthrene uptake in binary mixtures. Lineweaver-Burk analysis of kinetic measurements was used to demonstrate competitive inhibition of phenanthrene uptake by all four compounds, suggesting that multiple PAHs are being transformed by a common enzyme pathway in whole cells. Estimates of the inhibition coefficient, Ki, are reported for each compound. The occurrence of competitive metabolic processes in physiologically diverse organisms suggests that competitive metabolism may be a common phenomenon among PAH-degrading organisms. PMID:7887615

  2. Surface tailored organobentonite enhances bacterial proliferation and phenanthrene biodegradation under cadmium co-contamination.

    PubMed

    Mandal, Asit; Biswas, Bhabananda; Sarkar, Binoy; Patra, Ashok K; Naidu, Ravi

    2016-04-15

    Co-contamination of soil and water with polycyclic aromatic hydrocarbon (PAH) and heavy metals makes biodegradation of the former extremely challenging. Modified clay-modulated microbial degradation provides a novel insight in addressing this issue. This study was conducted to evaluate the growth and phenanthrene degradation performance of Mycobacterium gilvum VF1 in the presence of a palmitic acid (PA)-grafted Arquad® 2HT-75-based organobentonite in cadmium (Cd)-phenanthrene co-contaminated water. The PA-grafted organobentonite (ABP) adsorbed a slightly greater quantity of Cd than bentonite at up to 30mgL(-1) metal concentration, but its highly negative surface charge imparted by carboxylic groups indicated the potential of being a significantly superior adsorbent of Cd at higher metal concentrations. In systems co-contained with Cd (5 and 10mgL(-1)), the Arquad® 2HT-75-modified bentonite (AB) and PA-grafted organobentonite (ABP) resulted in a significantly higher (72-78%) degradation of phenanthrene than bentonite (62%) by the bacterium. The growth and proliferation of bacteria were supported by ABP which not only eliminated Cd toxicity through adsorption but also created a congenial microenvironment for bacterial survival. The macromolecules produced during ABP-bacteria interaction could form a stable clay-bacterial cluster by overcoming the electrostatic repulsion among individual components. Findings of this study provide new insights for designing clay modulated PAH bioremediation technologies in mixed-contaminated water and soil. PMID:26849325

  3. Electroremediation of a natural soil polluted with phenanthrene in a pilot plant.

    PubMed

    López-Vizcaíno, R; Alonso, J; Cañizares, P; León, M J; Navarro, V; Rodrigo, M A; Sáez, C

    2014-01-30

    In this work, a pilot plant with two rows of three electrodes in semipermeable electrolyte wells was used to study the electrokinetic treatment of a natural soil polluted with phenanthrene (PHE). The electrokinetic pilot plant was an open system, i.e., there was direct contact between the soil and air. To increase the solubility of phenanthrene, thereby enhancing its transport through the soil, an aqueous solution of the anionic surfactant dodecyl sulfate was used as a flushing fluid. The results show that at the pilot scale considered, gravity and evaporation fluxes are more relevant than electrokinetic fluxes. Contrary to observations at the laboratory scale, desorption of PHE promoted by electric heating appears to be a significant removal mechanism at the pilot scale. In addition, PHE is dragged by the electroosmotic flow in the cathodic wells and by electrophoresis after interaction of the surfactant with phenanthrene in the anodic wells. In spite of the long treatment time (corresponding to an energy consumption over 500kWhm(-3)), the average removal attained was only 25%. PMID:24361491

  4. Rhizodegradation potential and tolerance of Avicennia marina (Forsk.) Vierh in phenanthrene and pyrene contaminated sediments.

    PubMed

    Jia, Hui; Wang, He; Lu, Haoliang; Jiang, Shan; Dai, Minyue; Liu, Jingchun; Yan, Chongling

    2016-09-15

    A pot experiment was conducted to investigate the dissipation of phenanthrene and pyrene in spiked sediments with presence of Avicennia marina (Forsk.) Vierh. The rhizosphere environment was set up using a self-design nylon rhizo-bag which divided the sediment into the rhizosphere and non-rhizosphere. Results showed that the dissipation of phenanthrene and pyrene were significantly enhanced in the rhizosphere compared with non-rhizosphere sediments. Plant roots promoted dissipation significantly greater than the contribution of direct plant uptake and accumulation of phenanthrene and pyrene. The activities of antioxidant and detoxification enzymes in roots and leaves significantly increased against oxidative stress with increasing PAH concentrations. Furthermore, a significant relationship (R(2)>0.91) between dissolved organic carbon (DOC) concentrations and the residual of PAHs in rhizosphere and non-rhizosphere sediments was observed after 120days planting. Results indicated that rhizome mediation with A. marina is a useful approach to promote the depletion of PAHs in contaminated mangrove sediments. PMID:27373941

  5. Generation of hydroxyl radicals from metal-loaded humic acids

    SciTech Connect

    Paciolla, M.D.; Jansen, S.A.; Davies, G.

    1999-06-01

    Humic acids (HAs) are naturally occurring biopolymers that are ubiquitous in the environment. They are most commonly found in the soil, drinking water, and a variety of plants. Pharmacological and therapeutic studies involving humic acids have been reported to some extent. However, when certain transition metals are bound to humic acids, e.g., iron and copper, they can be harmful to biological organisms. For this study, humic acids were extracted from German, Irish, and New Hampshire soils that were selectively chosen because of their reich abundance in humic material. Each sample was treated at room temperature with 0.1 M ferric and cupric solutions for 48 h. The amount of iron and copper adsorbed by humic acid was accurately quantitated using atomic absorption spectroscopy. The authors further demonstrate that these metal-loaded humic acids can produce deleterious oxidizing species such as the hydroxyl radical (HO*) through the metal-driven Fenton reaction. Electron paramagnetic resonance (EPR) employing spin trapping techniques with 5,5-dimethylpyrroline N-oxide (DMPO) is used to confirm the generation of hydroxyl radicals. The DMPO-OH adduct with hyperfine splitting constants A{sub N} = A{sub H} = 14.9 G is observed upon the addition of exogenous hydrogen peroxide. The concentration of hydroxyl radical was determined using 4-hydroxytempo (TEMPO-OH) as a spin standard. The presence of another oxidizing species, Fe{double_bond}O{sup 2+}, is also proposed in the absence of hydrogen peroxide.

  6. A unifying model of cation binding by humic substances

    SciTech Connect

    Tipping, E.; Hurley, M.A. )

    1992-10-01

    Humic substances (humic and fulvic acids) are recognized to interact extensively with cations in natural waters and soils, with important effects on chemical speciation. There have been numerous laboratory studies of the interactions-reviewed by Boggs et al. (1985), Buffle (1988) and Sposito (1986)-and these have yielded a considerable body of quantitative binding data. However, the information is difficult to apply to natural systems because of the lack of a suitable model that can take into account competition effects among cations, including protons, and the influence of ionic strength. Another problem, at least in principle, is that the humic samples studied have come from a variety of sources and, therefore, may be intrinsically different in their ion-binding properties. The purpose of the work described here was to formulate a model of ion-binding by humic substances that could be used over a range of conditions, and to obtain parameters by analyzing published data on proton-humic and metal-humic interactions. The study aims to place available data into a unifying framework in order to rationalize present knowledge and aid the iterative processes of further experimentation and consequent model improvement. In this study, the authors concentrate on data for fulvic-type material, but the model (Model V) is applicable to all humic substances.

  7. Humic substances enhance chlorothalonil phototransformation via photoreduction and energy transfer.

    PubMed

    Porras, Jazmín; Fernández, Jhon J; Torres-Palma, Ricardo A; Richard, Claire

    2014-02-18

    The photodegradation of chlorothalonil, a polychlorinated aromatic fungicide widely used in agriculture, was investigated under ultraviolet-visible irradiation in the presence and absence of different humic substances that significantly enhance the chlorothalonil phototransformation. On the basis of a kinetic model, an analytical study, the effect of scavengers, the chlorothalonil phosphorescence measurement, and varying irradiation conditions, it was possible to demonstrate that this accelerating effect is due to their capacity to reduce the chlorothalonil triplet state via H-donor reaction and to energy transfer from the triplet humic to ground state chlorothalonil. Energy transfer occurs at wavelengths below 450 nm and accounts for up to 30% of the reaction in deoxygenated medium upon irradiation with polychromatic light (300-450 nm). This process is more important with Elliott humic and fulvic acids and with humic acids extracted from natural carbonaceous material than with Nordic NOM and Pahokee peat humic acids. The obtained results are of high relevance to understanding the processes involved in chlorothalonil phototransformation and the photoreactivity of humic substances. Chlorothalonil is one of the rare molecules shown to react by energy transfer from excited humic substances. PMID:24455968

  8. The interaction of humic substances with cationic polyelectrolytes.

    PubMed

    Kam, S K; Gregory, J

    2001-10-01

    The anionic charge carried by aquatic humic substances plays a major part in their interaction with metal ions and other cationic species. Removal of such substances by coagulation and flocculation can be, at least partly, determined by charge neutralisation. In this work, the charge densities of a commercial humic acid and an aquatic humic extract have been investigated by studying their interactions with a series of synthetic cationic polyelectrolytes. These covered a range of charge densities and molecular weights. The techniques used were colloid titration by spectrophotometry and streaming current detection, and flocculation determined by colour removal and by an optical monitoring method. For a given cationic polyelectrolyte, all four methods gave charge densities for humic substances which were in good agreement. However, systematic differences in the apparent humic charge density were found, depending on the charge density of the cationic polyelectrolyte used. With low charge density polyelectrolytes, the apparent anionic charge of the humic substances was found to be low. With higher polyelectrolyte charge densities, the apparent humic substance charge density increases and reaches a limiting value when the polyelectrolyte charge is greater than about 3 meq/g. This indicates a non-stoichiometric interaction between the anionic sites of the humic substances and the cationic charges of the low-charge polyelectrolytes. Optimum flocculation of humics occurred with less cationic charge in the case of low-charge polyelectrolytes than those with higher charge density. However, the degree of removal was considerably better in the latter case. In all cases, the molecular weight of the cationic polyelectrolytes (over a range from about 50,000 to 15 million) appeared to have no effect on the results. PMID:11561615

  9. Role of microbial adhesion in phenanthrene biodegradation by Pseudomonas fluorescens LP6a

    NASA Astrophysics Data System (ADS)

    Abbasnezhad, Hassan

    Biodegradation of poorly water soluble hydrocarbons, such as n-alkanes and polycyclic aromatic hydrocarbons (PAHs) is often limited by the low availability of the pollutant to microbes. Adhesion of microorganisms to the oil-water interface can influence this availability. Our approach was to study a range of compounds and mechanisms to promote the adhesion of a hydrophilic PAH degrading bacterium, Pseudomonas fluorescens LP6a, to an oil-water interface and examine the effect on biodegradation of phenanthrene by the bacteria. The cationic surfactants cetylpyridinium chloride (CPC), poly-L-lysine and chlorhexidine gluconate (CHX) and the long chain alcohols 1-dodecanol, 2-dodecanol and farnesol increased the adhesion of P. fluorescens LP6a to n-hexadecane from ca. 30% to ca. 90% of suspended cells adhering. The alcohols also caused a dramatic change in the oil-water contact angle of the cell surface, increasing it from 24° to 104°, whereas the cationic compounds had little effect. In contrast, cationic compounds changed the electrophoretic mobility of the bacteria, reducing the mean zeta potential from --23 to --7 mV in 0.01M potassium phosphate buffer, but the alcohols had no effect on zeta potential. This results illustrate that alcohols acted through altering the cell surface hydrophobicity, whereas cationic surfactants changed the surface charge density. Phenanthrene was dissolved in heptamethylnonane and introduced to the aqueous growth medium, hence forming a two phase system. Introducing 1-dodecanol at concentrations of 217, 820 or 4100 mg/L resulted in comparable increases in phenanthrene biodegradation of about 30% after 120 h incubation with non-induced cultures. After 100 h of incubation with LP6a cultures induced with 2-aminobenzoate, 4.5% of the phenanthrene was mineralized by cultures versus more than 10% by the cultures containing initial 1-dodecanol or 2-dodecanol concentrations of 120 or 160 mg/L. The production and accumulation of metabolites in

  10. Amino acid composition of humic substances in tundra soils

    NASA Astrophysics Data System (ADS)

    Vasilevich, R. S.; Beznosikov, V. A.

    2015-06-01

    Peripheral amino acid fragments of humic and fulvic acid molecules from tundra soils have been identified and quantified. A significant weight fraction of amino acids has been found in humic acid preparations, which exceeds their content in fulvic acids. Features of the amino acid composition of humic substances along the soil profile and depending on the degree of hydromorphism and the proportions of different (neutral, basic, acidic, cyclic) groups in amino acids have been revealed. The molar ratio between the hydroxy and heterocyclic amino acids reflects the degree of humification of the soil.

  11. Humic substances biological activity at the plant-soil interface

    PubMed Central

    Trevisan, Sara; Francioso, Ornella; Nardi, Serenella

    2010-01-01

    Humic substances (HS) represent the organic material mainly widespread in nature. HS have positive effects on plant physiology by improving soil structure and fertility and by influencing nutrient uptake and root architecture. The biochemical and molecular mechanisms underlying these events are only partially known. HS have been shown to contain auxin and an “auxin-like” activity of humic substances has been proposed, but support to this hypothesis is fragmentary. In this review article, we are giving an overview of available data concerning molecular structures and biological activities of humic substances, with special emphasis on their hormone-like activities. PMID:20495384

  12. Comparing the desorption and biodegradation of low concentrations of phenanthrene sorbed to activated carbon, biochar and compost.

    PubMed

    Marchal, Geoffrey; Smith, Kilian E C; Rein, Arno; Winding, Anne; Trapp, Stefan; Karlson, Ulrich G

    2013-02-01

    Carbonaceous soil amendments are applied to contaminated soils and sediments to strongly sorb hydrophobic organic contaminants (HOCs) and reduce their freely dissolved concentrations. This limits biouptake and toxicity, but also biodegradation. To investigate whether HOCs sorbed to such amendments can be degraded at all, the desorption and biodegradation of low concentrations of (14)C-labelled phenanthrene (≤5 μg L(-1)) freshly sorbed to suspensions of the pure soil amendments activated carbon (AC), biochar (charcoal) and compost were compared. Firstly, the maximum abiotic desorption of phenanthrene from soil amendment suspensions in water, minimal salts medium (MSM) or tryptic soy broth (TSB) into a dominating silicone sink were measured. Highest fractions remained sorbed to AC (84±2.3%, 87±4.1%, and 53±1.2% for water, MSM and TSB, respectively), followed by charcoal (35±2.2%, 32±1.7%, and 12±0.3%, respectively) and compost (1.3±0.21%, similar for all media). Secondly, the mineralization of phenanthrene sorbed to AC, charcoal and compost by Sphingomonas sp. 10-1 (DSM 12247) was determined. In contrast to the amounts desorbed, phenanthrene mineralization was similar for all the soil amendments at about 56±11% of the initially applied radioactivity. Furthermore, HPLC analyses showed only minor amounts (<5%) of residual phenanthrene remaining in the suspensions, indicating almost complete biodegradation. Fitting the data to a coupled desorption and biodegradation model revealed that desorption did not limit biodegradation for any of the amendments, and that degradation could proceed due to the high numbers of bacteria and/or the production of biosurfactants or biofilms. Therefore, reduced desorption of phenanthrene from AC or charcoal did not inhibit its biodegradation, which implies that under the experimental conditions these amendments can reduce freely dissolved concentration without hindering biodegradation. In contrast, phenanthrene sorbed to compost

  13. Trinuclear nickel coordination complexes of phenanthrene-9,10-dione dioxime

    PubMed Central

    Williams, Owen M.; Cowley, Alan H.

    2016-01-01

    A trinuclear nickel complex of phenanthrene-9,10-dione dioxime (H2pqd), namely bis­[μ2-9,10-bis­(oxido­imino)­phenanthrene]­bis­[μ2-10-(oxido­imino)phenanthrene-9-one oxime](phenanthrene-9,10-dione dioxime)trinickel(II) toluene disolvate, [Ni3(C14H8N2O2)2(C14H9N2O2)2(C14H10N2O2)]·2C7H8, has been isolated and its crystal structure determined. This complex features three independent NiII atoms that are arranged in a triangular fashion along with five supporting ligands. There are two square-planar NiII atoms and a third pseudo-octa­hedral NiII atom. While the square-planar NiII atoms are stacked, there are no ligand bridges between them. Each square-planar NiII atom, however, bridges with the pseudo-octa­­hedral NiII atom through Ni—N—O—Ni and Ni—O—Ni bonds. A fluorido­bor­ation reaction of the proton-bridged species gave the analogous complex bis­(μ2-bis­{[10-(oxido­imino)-9,10-di­hydro­phenanthren-9-yl­idene]amino}di­fluorido­borato)(phenanthrene-9,10-dione dioxime)trinickel(II) dichloromethane trisolvate, [Ni3(C28H16BF2N4O2)4(C14H10N2O2)]·3CH2Cl2, which shows the same binding structure, but features a widened Ni—Ni inter­action between the square-planar NiII atoms. The proton-bridged complex completes the macrocyclic coordination around the square-planar NiII atoms by means of an O—H⋯O hydrogen bond. Both compounds feature O—H⋯N hydrogen bonds between the oxime and the N atoms attached to square-planar nickel atom. The nickel units show no direct inter­action with their nearest neighbors in the extended lattice. Two π-stacking inter­actions between adjacent mol­ecules are found: one with a centroid–centroid distance of 3.886 (2) Å and the other with a centroid–centroid distance of 4.256 (3) Å. In the latter case, although not aromatic, the distance to the centroid of the central phenanthrene ring is shorter, with a distance of 3.528 (3) Å. Toluene mol­ecules occupy the solvent channels that are

  14. Trinuclear nickel coordination complexes of phenanthrene-9,10-dione dioxime.

    PubMed

    Williams, Owen M; Cowley, Alan H

    2016-04-01

    A trinuclear nickel complex of phenanthrene-9,10-dione dioxime (H2pqd), namely bis-[μ2-9,10-bis-(oxido-imino)-phenanthrene]-bis-[μ2-10-(oxido-imino)phenanthrene-9-one oxime](phenanthrene-9,10-dione dioxime)trinickel(II) toluene disolvate, [Ni3(C14H8N2O2)2(C14H9N2O2)2(C14H10N2O2)]·2C7H8, has been isolated and its crystal structure determined. This complex features three independent Ni(II) atoms that are arranged in a triangular fashion along with five supporting ligands. There are two square-planar Ni(II) atoms and a third pseudo-octa-hedral Ni(II) atom. While the square-planar Ni(II) atoms are stacked, there are no ligand bridges between them. Each square-planar Ni(II) atom, however, bridges with the pseudo-octa--hedral Ni(II) atom through Ni-N-O-Ni and Ni-O-Ni bonds. A fluorido-bor-ation reaction of the proton-bridged species gave the analogous complex bis-(μ2-bis-{[10-(oxido-imino)-9,10-di-hydro-phenanthren-9-yl-idene]amino}di-fluorido-borato)(phenanthrene-9,10-dione dioxime)trinickel(II) dichloromethane trisolvate, [Ni3(C28H16BF2N4O2)4(C14H10N2O2)]·3CH2Cl2, which shows the same binding structure, but features a widened Ni-Ni inter-action between the square-planar Ni(II) atoms. The proton-bridged complex completes the macrocyclic coordination around the square-planar Ni(II) atoms by means of an O-H⋯O hydrogen bond. Both compounds feature O-H⋯N hydrogen bonds between the oxime and the N atoms attached to square-planar nickel atom. The nickel units show no direct inter-action with their nearest neighbors in the extended lattice. Two π-stacking inter-actions between adjacent mol-ecules are found: one with a centroid-centroid distance of 3.886 (2) Å and the other with a centroid-centroid distance of 4.256 (3) Å. In the latter case, although not aromatic, the distance to the centroid of the central phenanthrene ring is shorter, with a distance of 3.528 (3) Å. Toluene mol-ecules occupy the solvent channels that are oriented along the c axis. In

  15. Photochemical aspects related to humic substances

    SciTech Connect

    Frimmel, F.H. )

    1994-01-01

    Dissolved humic substances (HS) show yellow color and relatively strong absorption in the UV range [a(254 nm) ca. 0.04 cm[sup [minus]1] for c(DOC) = 1 mg/L]. This is the basis for photochemical reactions in the photic zone of aquatic systems and in water treatment using IV sources. Even though understanding the mechanisms involved in the energy transfer and the resulting reactions is hampered by the poorly defined structure of HS, reliable information has been gathered on some typical aspects of their photochemistry. The luminescence of HS can be influenced and partly quenched by molecular interactions with other water constituents (e.g., heavy metals and organic micropollutants). The presence of oxygen may lead to the sensitized production of singlet oxygen (O[sub 2]), that can react specifically with substances containing diene structures or low valent sulfur. Because of the presence of these structures in HS, humic molecules will also react with the sensitized products. As a consequence, their biological, chemical, and physical properties are influenced. In addition, HS have a significant impact on the photochemical treatment of organic micropollutants in water. This has to be kept in mind when using photochemical steps for water treatment. The results from model experiments reflecting the conditions in surface water and in water treatment are given and discussed. In the presence of H[sub 2]O[sub 2], irradiation led to a transformation and partial degradation of HS. The rate of photochemical degradation of pesticides (e.g., atrazine) was decreased in the presence of HS. Fe and Mn quenched the luminescence. From this, a decrease of excited states of HS for sensitizing reactions can be deduced. The results suggest the manyfold and significant influences of HS on the photochemistry of aquatic systems. 66 refs., 9 figs., 7 tabs.

  16. TCE adsorption by GAC preloaded with humic substances

    SciTech Connect

    Kilduff, J.E.; Karanfil, T.; Weber, W.J. Jr.

    1998-05-01

    Adsorption of trichloroethylene (TCE) by activated carbon preloaded with humic and fulvic acids was studied under several conditions in completely mixed batch systems. The authors investigated how molecular weight and molecular-weight distribution of preloaded humic substances affected subsequent adsorption of TCE. The capacity of carbon to adsorb TCE was most greatly reduced in carbon that was preloaded with humic acid components having molecular weights less than about 1,400 g/mol as polystyrene sulfonate. The adsorption capacity was greatly reduced in carbon that was preloaded with whole humic mixtures in which lower molecular weights predominated. The energy distributions of adsorbent indicate that preloaded compounds preferentially occupy high-energy sites, making them inaccessible to subsequently encountered TCE.

  17. Adsorption of humic acids and trace metals in natural waters

    NASA Technical Reports Server (NTRS)

    Leung, W. H.

    1982-01-01

    Studies concerning the interactions between suspended hydrous iron oxide and dissolved humic acids and trace metals are reported. As a major component of dissolved organic matters and its readiness for adsorption at the solid/water interface, humic acids may play a very important role in the organometallic geochemistry of suspended sediments and in determining the fate and distribution of trace metals, pesticides and anions in natural water systems. Most of the solid phases in natural waters contain oxides and hydroxides. The most simple promising theory to describe the interactions of hydrous iron oxide interface is the surface complex formation model. In this model, the adsorptions of humic acids on hydrous iron oxide may be interpreted as complex formation of the organic bases (humic acid oxyanions) with surface Fe ions. Measurements on adsorptions were made in both fresh water and seawater. Attempts have been made to fit our data to Langmuir adsorption isotherm. Adsorption equilibrium constants were determined.

  18. Humic substances interfere with detection of pathogenic prion protein

    USGS Publications Warehouse

    Smith, Christen B.; Booth, Clarissa J.; Wadzinski, Tyler J.; Legname, Giuseppe; Chappell, Rick; Johnson, Christopher J.; Pedersen, Joel A.

    2014-01-01

    Studies examining the persistence of prions (the etiological agent of transmissible spongiform encephalopathies) in soil require accurate quantification of pathogenic prion protein (PrPTSE) extracted from or in the presence of soil particles. Here, we demonstrate that natural organic matter (NOM) in soil impacts PrPTSE detection by immunoblotting. Methods commonly used to extract PrPTSE from soils release substantial amounts of NOM, and NOM inhibited PrPTSE immunoblot signal. The degree of immunoblot interference increased with increasing NOM concentration and decreasing NOM polarity. Humic substances affected immunoblot detection of prion protein from both deer and hamsters. We also establish that after interaction with humic acid, PrPTSE remains infectious to hamsters inoculated intracerebrally, and humic acid appeared to slow disease progression. These results provide evidence for interactions between PrPTSE and humic substances that influence both accurate measurement of PrPTSE in soil and disease transmission.

  19. CAPILLARY ELECTROPHORESIS FOR THE CHARACTERIZATION OF HUMIC SUBSTANCES

    EPA Science Inventory

    The potential of high performance capillary electrophoresis (HPCE), especially in the free solution mode (FSCE), is demonstrated for the analysis/characterization of environmental humic substances (HUS). he very high efficiency of HPCE separations allows the production of electro...

  20. Isolation, plant colonization potential, and phenanthrene degradation performance of the endophytic bacterium Pseudomonas sp. Ph6-gfp

    PubMed Central

    Sun, Kai; Liu, Juan; Gao, Yanzheng; Jin, Li; Gu, Yujun; Wang, Wanqing

    2014-01-01

    This investigation provides a novel method of endophyte-aided removal of polycyclic aromatic hydrocarbons (PAHs) from plant bodies. A phenanthrene-degrading endophytic bacterium Pseudomonas sp. Ph6 was isolated from clover (Trifolium pratense L.) grown in a PAH-contaminated site. After being marked with the GFP gene, the colonization and distribution of strain Ph6-gfp was directly visualized in plant roots, stems, and leaves for the first time. After ryegrass (Lolium multiflorum Lam.) roots inoculation, strain Ph6-gfp actively and internally colonized plant roots and transferred vertically to the shoots. Ph6-gfp had a natural capacity to cope with phenanthrene in vitro and in planta. Ph6-gfp degraded 81.1% of phenanthrene (50 mg·L−1) in a culture solution within 15 days. The inoculation of plants with Ph6-gfp reduced the risks associated with plant phenanthrene contamination based on observations of decreased concentration, accumulation, and translocation factors of phenanthrene in ryegrass. Our results will have important ramifications in the assessment of the environmental risks of PAHs and in finding ways to circumvent plant PAH contamination. PMID:24964867

  1. Quantifying the biodegradation of phenanthrene by Pseudomonas stutzeri P16 in the presence of a nonionic surfactant.

    PubMed Central

    Grimberg, S J; Stringfellow, W T; Aitken, M D

    1996-01-01

    The low water solubility of polycyclic aromatic hydrocarbons is believed to limit their availability to microorganisms, which is a potential problem for bioremediation of polycyclic aromatic hydrocarbon-contaminated sites. Surfactants have been suggested to enhance the bioavailability of hydrophobic compounds, but both negative and positive effects of surfactants on biodegradation have been reported in the literature. Earlier, we presented mechanistic models of the effects of surfactants on phenanthrene dissolution and on the biodegradation kinetics of phenanthrene solubilized in surfactant micelles. In this study, we combined the biodegradation and dissolution models to quantify the influence of the surfactant Tergitol NP-10 on biodegradation of solid-phase phenanthrene by Pseudomonas stutzeri P16. Although micellized phenanthrene does not appear to be available directly to the bacterium, the ability of the surfactant to increase the phenanthrene dissolution rate resulted in an overall increase in bacterial growth rate in the presence of the surfactant. Experimental observations could be predicted well by the derived model with measured biokinetic and dissolution parameters. The proposed model therefore can serve as a base case for understanding the physical-chemical effects of surfactants on nonaqueous hydrocarbon bioavailability. PMID:8779577

  2. Aliphatic structure of humic acids; a clue to their origin

    USGS Publications Warehouse

    Hatcher, P.G.; Maciel, G.E.; Dennis, L.W.

    1981-01-01

    Nuclear magnetic resonance spectra (both 1H and 13C) of humic acids from diverse depositional environments indicate the presence of aromatic chemical structures, most likely derived from lignin of vascular plants, and complex, paraffinic structures, most likely derived from algal or microbial sources. The latter components account for a major fraction of humic acid structures in both terrestrial and aquatic environments, suggesting that algae or microbes play a large role in humification of organic remains from both systems. ?? 1981.

  3. Capillary zone electrophoresis of humic acids from the American continent.

    PubMed

    Pacheco, Maria de Lourdes; Havel, Josef

    2002-01-01

    A multicomponent background electrolyte (BGE) was developed and its composition optimized using artificial neural networks (ANN). The optimal BGE composition was found to be 90 mM boric acid, 115 mM Tris, and 0.75 mM EDTA (pH 8.4). A separation voltage of 20 kV, 20 degrees C and detection at 210 nm were used. The method was applied to characterize several humic acids originating from various countries of the American continent: soil (Argentina), peat (Brazil), leonardite (Guatemala and Mexico) and coal (United States). Comparison with humic acids of International Humic Substances Society (IHSS) standard samples was also done. Well reproducible electropherograms showing a relatively high number of peaks were obtained. Characterization of the samples by elemental analysis and UV spectrophotometry was also done. In spite of the very different origins, the similarities between humic acids are high and by matrix assisted desorption/ionization-time of flight (MALDI-TOF)-mass spectrometry it was shown that most of the m/z patterns are the same in all humic acids. This means that humic acids of different origin have the same structural units or that they contain the same components. PMID:11840535

  4. Metabolism of a Representative Oxygenated Polycyclic Aromatic Hydrocarbon (PAH) Phenanthrene-9,10-quinone in Human Hepatoma (HepG2) Cells

    PubMed Central

    2014-01-01

    Exposure to polycyclic aromatic hydrocarbons (PAHs) in the food chain is the major human health hazard associated with the Deepwater Horizon oil spill. Phenanthrene is a representative PAH present in crude oil, and it undergoes biological transformation, photooxidation, and chemical oxidation to produce its signature oxygenated derivative, phenanthrene-9,10-quinone. We report the downstream metabolic fate of phenanthrene-9,10-quinone in HepG2 cells. The structures of the metabolites were identified by HPLC–UV–fluorescence detection and LC–MS/MS. O-mono-Glucuronosyl-phenanthrene-9,10-catechol was identified, as reported previously. A novel bis-conjugate, O-mono-methyl-O-mono-sulfonated-phenanthrene-9,10-catechol, was discovered for the first time, and evidence for both of its precursor mono conjugates was obtained. The identities of these four metabolites were unequivocally validated by comparison to authentic enzymatically synthesized standards. Evidence was also obtained for a minor metabolic pathway of phenanthrene-9,10-quinone involving bis-hydroxylation followed by O-mono-sulfonation. The identification of 9,10-catechol conjugates supports metabolic detoxification of phenanthrene-9,10-quinone through interception of redox cycling by UGT, COMT, and SULT isozymes and indicates the possible use of phenanthrene-9,10-catechol conjugates as biomarkers of human exposure to oxygenated PAH. PMID:24646012

  5. Complete genome sequence of Burkholderia caribensis Bcrs1W (NBRC110739), a strain co-residing with phenanthrene degrader Mycobacterium sp. EPa45.

    PubMed

    Ohtsubo, Yoshiyuki; Nonoyama, Shouta; Ogawa, Natsumi; Kato, Hiromi; Nagata, Yuji; Tsuda, Masataka

    2016-06-20

    Complete genome sequence of Burkholderia caribensis Bcrs1W, isolated from a phenanthrene-degrading mixed culture, was determined. The genomic information of Bcrs1W will be beneficial to elucidating the mechanisms of its positive effects on phenanthrene degradation by co-residing Mycobacterium sp. Epa45, and to exploiting their degradation potentials. PMID:27130496

  6. Synthesis of phenanthrenes through copper-catalyzed cross-coupling of N-tosylhydrazones with terminal alkynes.

    PubMed

    Hossain, Mohammad Lokman; Ye, Fei; Liu, Zhenxing; Xia, Ying; Shi, Yi; Zhou, Lei; Zhang, Yan; Wang, Jianbo

    2014-09-19

    A novel protocol for the synthesis of phenanthrenes through the copper-catalyzed reaction of aromatic tosylhydrazones with terminal alkynes is explored. The reaction proceeds via the formation of an allene intermediate and subsequent six-π-electron cyclization-isomerization, affording phenanthrene derivatives in good yields. The transformation can be performed in two ways: (1) with N-tosylhydrazones derived from [1,1'-biphenyl]-2-carbaldehydes and terminal alkynes as the starting materials and (2) with N-tosylhydrazones derived from aromatic aldehydes and 2-alkynyl biphenyls as the starting materials. This new phenanthrene synthesis uses readily available starting materials and a cheap copper catalyst and has a wide range of functional group compatibility. PMID:25153826

  7. Phase transitions and hygroscopic growth of aerosol particles containing humic acid and mixtures of humic acid and ammonium sulphate

    NASA Astrophysics Data System (ADS)

    Badger, C. L.; George, I.; Griffiths, P. T.; Braban, C. F.; Cox, R. A.; Abbatt, J. P. D.

    2006-03-01

    The phase transitions and hygroscopic growth of two humic acid aerosols (Aldrich sodium salt and Leonardite Standard (IHSS)) and their mixtures with ammonium sulphate have been investigated using a combination of two techniques, Fourier transform infra-red (FTIR) spectroscopy and tandem differential mobility analysis (TDMA). A growth factor of 1.16 at 85% relative humidity (RH) was found for the Aldrich humic acid which can be regarded as an upper limit for growth factors of humic-like substances (HULIS) found in atmospheric aerosol and is significantly smaller than that of typical atmospheric inorganics. We find that the humic acid aerosols exhibit water uptake over all relative humidities with no apparent phase changes, suggesting that these aerosols readily form supersaturated droplets. In the mixed particles, the humic acid component decreases the deliquescence relative humidity (DRH) and increases the efflorescence relative humidity (ERH) of the ammonium sulphate component, and there is some degree of water uptake prior to ammonium sulphate deliquescence. In addition, at low RH, the FTIR spectra show that the ammonium is present in a different chemical environment in the mixed aerosols than in crystalline ammonium sulphate, perhaps existing as a complex with the humic materials. The growth factors of the mixed aerosols are intermediate between those of the single-component aerosols and can be predicted assuming that the inorganic and organic fractions take up water independently.

  8. Phase transitions and hygroscopic growth of aerosol particles containing humic acid and mixtures of humic acid and ammonium sulphate

    NASA Astrophysics Data System (ADS)

    Badger, C. L.; George, I.; Griffiths, P. T.; Braban, C. F.; Cox, R. A.; Abbatt, J. P. D.

    2005-10-01

    The phase transitions and hygroscopic growth of two humic acid aerosols (Aldrich sodium salt and Leonardite Standard (IHSS)) and their mixtures with ammonium sulphate have been investigated using a combination of two techniques, Fourier transform infra-red (FTIR) spectroscopy and tandem differential mobility analysis (TDMA). A growth factor of 1.16 at 85% relative humdity (RH) was found for the Aldrich humic acid which can be regarded as an upper limit for growth factors of humic-like substances (HULIS) found in atmospheric aerosol and is significantly smaller than that of typical atmospheric inorganics. We find that the humic acid aerosols exhibit water uptake over all relative humidites with no apparent phase changes, suggesting that these aerosols readily form supersaturated droplets. In the mixed particles, the humic acid component decreases the deliquescence relative humidity (DRH) and increases the efflorescence relative humidity (ERH) of the ammonium sulphate component, and there is some degree of water uptake prior to ammonium sulphate deliquescence. In addition, at low RH, the FTIR spectra show that the ammonium is present in a different chemical environment in the mixed aerosols than in crystalline ammonium sulphate, perhaps existing as a complex with the humic materials. The growth factors of the mixed aerosols are intermediate between those of the single component aerosols and can be predicted assuming that the inorganic and organic fractions take up water independently.

  9. A comparison of water solubility enhancements of organic solutes by aquatic humic materials and commercial humic acids

    USGS Publications Warehouse

    Chlou, C.T.; Kile, D.E.; Brinton, T.I.; Malcolm, R.L.; Leenheer, J.A.; MacCarthy, P.

    1987-01-01

    Water solubility enhancements of 1,1-bis(p-chloro-phenyl)-2,2,2-trichloroethane (p,p???-DDT), 2,4,5,2???,5???-pentachlorobiphenyl (2,4,5,2???,5???-PCB), and 2,4,4???-tri-chlorobiphenyl (2,4,4???-PCB) by dissolved organic matter have been studied with the following samples: (1) acidic water samples from the Suwannee River, Georgia, and the Sopchoppy River, Florida; (2) a humic extract of a nearly neutral pH water from the Calcasieu River, Louisiana; (3) commercial humic acids from the Aldrich Chemical Co. and Fluka-Tridom Chemical Corp. The calculated partition coefficients on a dissolved organic carbon basis (Kdoc) for organic solutes with water samples and aquatic humic extracts from this and earlier studies indicate that the enhancement effect varies with the molecular composition of the aquatic humic materials. The Kdoc values with water and aquatic humic samples are, however, far less than the observed Kdoc values obtained with the two commercial samples, by factors of about 4-20. In view of this finding, one should be cautious in interpreting the effects of the dissolved organic matter on solubility enhancement of organic solutes on the basis of the use of commercial humic acids.

  10. Intramolecular Dehydrogenative Coupling of 2,3-Diaryl Acrylic Compounds: Access to Substituted Phenanthrenes.

    PubMed

    Gupta, Vijay; Rao, V U Bhaskara; Das, Tamal; Vanka, Kumar; Singh, Ravi P

    2016-07-01

    A simple, facile, and environmentally benign intramolecular dehydrogenative coupling of various 1,2-diarylethylenes for the synthesis of phenanthrenes in excellent yield has been described. This new methodology uses ceric ammonium nitrate (CAN) as a promoter at room temperature and has been extended to intermolecular synthesis of biaryl compounds. The electron transfer from methoxyarene to cerium leads to cationic radical formation, which further proceeds to intramolecular coupling. Preliminary mechanistic investigation by EPR spectroscopy and density functional theory calculation suggested a similar view. PMID:27232691

  11. Disposition of phenanthrene and octachlorostyrene in spiny lobsters, Panulirus argus, after intragastric administration

    SciTech Connect

    Solbakken, J.E.; Knap, A.H.

    1986-11-01

    Spiny lobster (Panulirus argus) is a commercial crustacean in Bermuda. It was therefore of interest to study the fate of xenobiotics in the species as very little attention has been paid to toxicological studies with spiny lobsters. Earlier it was found that the temperate crustacean, Nephrops norveqicus (Norway lobster) had the ability to accumulate and eliminate phenanthrene. The aim of this investigation was to gain a better understanding of the fate of xenobiotics in crustaceans under different environmental conditions, and to compare the polycyclic aromatic hydrocarbon, phenenthrene, with the more environmentally persistent chlorinated compound octachlorostyrene, a by-product of magnesium metal production.

  12. Accumulation and elimination of (9-/sup 14/C)phenanthrene in the calico clam (Macrocallista maculata)

    SciTech Connect

    Solbakken, J.E.; Jeffrey, F.M.H.; Knap, A.H.; Palmork, K.H.

    1982-05-01

    The accumulation and elimination of radoactivity is studied after exposure of (9-/sup 14/C) phenanthrene in various tissues in the calico clam (Macrocallista maculata). Results show that accumulation is highest in the lipid-rich hepatopancreas, and the elimination is very efficient compared to the horse mussel. The calico clam, which is a sand-dwelling organism, can easily come in contact with hydrocarbon contaminated sedments and might accumulate the hydrocarbons at different extents in various tissues. The efficient elimination, however, will prevent a lasting accumulation. (JMT)

  13. The origin of delayed fluorescence in charge-transfer crystals: pyromellitic dianhydride-phenanthrene crystal

    NASA Astrophysics Data System (ADS)

    Kozankiewicz, B.

    1987-03-01

    The temperature dependence of emission spectra and their decay parameters for pyromellitic dianhydride-phenanthrene chargetransfer crystals have been investigated between 1.7 and 300 K. It has been established that the delayed fluorescence originates from triplet-triplet annihilation at temperatures between 30 and 60 K. (activation energy 290 ± 20 cm -1) and from thermal activation of triplet excitons to the singlet excitonic band for temperatures higher than 60 K (activation energy 600 ± 30 cm -1). This mechanism may be considered as typical for charge-transfer crystals characterized by intermediate (50-80%) charge-transfer character of triplet excitons.

  14. Biodegradability of nonaqueous-phase liquids affects the mineralization of phenanthrene in soil because of microbial competition

    SciTech Connect

    Morrison, D.E.; Alexander, M.

    1997-08-01

    A study was conducted to determine the effects of biodegradability of nonaqueous-phase liquids (NAPLs) and microbial competition on the biodegradation in soil of a constituent of the NAPLs. The rates of mineralization of phenanthrene dissolved in 8 mg of 2,2,4,4,6,8,8-heptamethylnonane (HMN), di(2-ethylhexyl) phthalate (DEHP), or pristane per g of soil were faster than the rates when the compound was dissolved in hexadecane or dodecane. Addition of inorganic N and P to the soil increased the mineralization rate in the first two but not the last two NAPLs. N and P addition did not enhance mineralization of phenanthrene when added in 500 {micro}g of hexadecane, pristane, or HMN per g of soil. Hexadecane was rapidly degraded, pristane was slowly metabolized, DEHP was still slower, and HMN was not mineralized in the test period. Mixing the soil stimulated mineralization of phenanthrene dissolved in HMN but not in hexadecane. Mineralization of phenanthrene dissolved in HMN was the same if the gas phase contained 21%, 2.1%, or traces of O{sub 2}. In contrast, the biodegradation of phenanthrene dissolved in hexadecane, although the same at 21 and 2.1% O{sub 2}, was not observed if traces of O{sub 2} were present. The mineralization was slower in unshaken soil-water mixtures if phenanthrene was added in hexadecane than in HMN or pristane, but the rates with the 3 NAPLs were increased by shaking the suspensions. The authors suggest that the biodegradability of major components of NAPLs and microbial competition for N, P, or O{sub 2} will have a major impact on the rate of transformation of minor constituents of NAPLs.

  15. Effect of humic acid source on humic acid adsorption onto titanium dioxide nanoparticles.

    PubMed

    Erhayem, Mohamed; Sohn, Mary

    2014-02-01

    In many studies, different humic acid (HA) sources are used interchangeably to evaluate the effect of organic matter on geochemical processes in the environment. This research looks more specifically at the effect of HA source on HA adsorption onto nano-TiO2 and how HA adsorption affects the fate and transport of nano-TiO2. In this study, six humic acids (HAs) were studied which were derived from soils (SLHA), or from sediments (SDHA) all originating from the state of Florida. Humic acid adsorption onto titanium dioxide nanoparticles (nano-TiO2) and the sedimentation of HA-coated and uncoated nano-TiO2 were monitored by Ultraviolet-visible (UV-vis) spectroscopy. Synchronous scan fluorescence (SSF) spectroscopy was used to complement the study of HA adsorption onto nano-TiO2. Phosphate buffer was found to reduce the amount of HA adsorbed onto nano-TiO2 relative to solutions of NaCl of the same pH and ionic strength. Adsorption constant values (Kads) for HAs varied in the order SLHA>FSDHA (freshwater sedimentary HA)>ESDHA (estuarine sedimentary HA). SSF results suggested that the more highly conjugated fractions of HA, which are more prevalent in SLHAs versus SDHAs, were preferentially adsorbed. In order to better understand the relationship between adsorption and aggregation, sedimentation studies were conducted and it was found that the percentage of nano-TiO2 sedimentation was preferentially enhanced in the order of the presence of SLHA>FSDHA>ESDHA. The extent of nano-TiO2 sedimentation was decreased with increasing HA concentration. TEM imaging of nano-TiO2 confirmed that nano-TiO2 was aggregated in the presence of HAs. The findings in this study suggest that HAs from different sources influence the fate and transport of nano-TiO2 in the environment differently. PMID:24140685

  16. Isolation of humic and non-humic NOM fractions: structural characterization.

    PubMed

    Croué, Jean-Philippe

    2004-03-01

    The combination of RO concentration and XAD-8/XAD-4 resin adsorption techniques was used to isolate the different constituents of the Natural Organic Matter (NOM) from inorganic salts. NOM fractions i.e. colloids, hydrophobic NOM (HPO humic substances), transphilic NOM (TPI) and hydrophilic NOM (HPI) fractions isolated from different surface waters were characterized using 13C NMR and FT-IR spectroscopy and HPLC/Size Exclusion Chromatography coupled with UV and DOC detection. Results showed that the isolation procedure was suitable to quantitatively isolate the different fractions of NOM. PMID:15038544

  17. DBP formation of aquatic humic substances

    USGS Publications Warehouse

    Pomes, M.L.; Green, W.R.; Thurman, E.M.; Orem, W.H.; Lerch, H.E.

    1999-01-01

    Aquatic humic substances (AHSs) in water generate potentially harmful disinfection by-products (DBPs) such as haloacetic acids (HAAs) and trihalomethanes (THMs) during chlorination. AHSs from two Arkansas reservoirs were characterized to define source, identify meta-dihydroxybenzene (m-DHB) structures as probable DBP precursors, and evaluate predicted HAA and THM formation potentials. Elemental nitrogen content 0.5 ??eq/mg, ??13C values of -27???, and low yields of syringyl phenols found by cupric oxide (CuO) oxidation suggest a pine tree source for the AHSs found in the Maumelle and Winona reservoirs in Little Rock, Ark. CuO oxidation yielded fewer m-DHB structures in Maumelle AHSs than in Winona AHSs. A higher 3,5-dihydroxybenzoic acid (3,5-DHBA) content correlated with increased HAA and THM formation potential. The 3,5-DHBA concentration in Winona AHSs was similar to the range found in AHSs extracted from deciduous leaf litter, twigs, and grass leachates.

  18. Hydrophysical properties of Humic Latosols from Brazil

    NASA Astrophysics Data System (ADS)

    Ebenezer Ajayi, Ayodele; de Souza Dias, Moacir; Curi, Nilton; Moreira Pais, Paula Sant'Anna; Iori, Piero

    2014-10-01

    The hydrophysical properties of the prevalent Humic Latosols (organic matter rich and charcoal stained soils) were related to structural sustainability under loading. Intact cores collected at the Ap, AB, Bw horizons were used for hydrophysical characterization. Precompression stresses at 10 suctions were obtained to estimate the load bearing capacities. We observed the dominance of kaolinite with some occurrences of gibbsite and hydroxy-interlayered vermiculite in the clay mineralogy. The high organic matter content in the Ap horizon favours crumb structure with the structural unit presenting high porosity and water retention. The structure of the AB and Bw horizons was, however, granular with structural units having low porosity. Possible influence of earlier incidences of fire enhanced the organic matter and carbon content in the soil reducing down the profile from 42.5 g kg-1 at the Ap to 16.4 g kg-1 at the Bw horizon. The C/N ratio increased from 14 at the Ap to 17 at the Bw, and air capacity increased from 18.1% at Ap to 32.0% at Bw. Precompression stress values were: 100.6±40.7 kPa at Ap, 117.4±44.6 kPa at AB, and 116.1±58.9 kPa at Bw. Load bearing capacities at the AB and Bw horizons were homogenous.

  19. Uptake of metal ions on humic acids

    SciTech Connect

    Pehlivan, E.; Arslan, G.

    2006-09-15

    The kinetics, the sorption capacities, pH and temperature dependence of sorption of humic acids (HAs) of Turkish brown coals with respect to Zn(II), Cu(II), Ni(II), Co(II) and Pb(II) ions were investigated, and the roles of the carboxylic and phenolic groups in the adsorption of metals ion on HAs were searched in this work. These metal ions are able to form complex compounds with carboxylic and phenolic groups of HAs. Adsorption equilibrium was achieved in between 50 and 60 min for all studied cations. HAs extracted from different brown coals have been characterized by chemical and physical methods. The chemical properties of HAs showed differences depending on the source from which they were obtained. The sorption of metals on the surface of HAs depends strongly on the pH, and sorption decreases with decreasing pH. Maximum removal of metal ions was demonstrated at pH values of 4.1-5.0. The Langmuir adsorption isotherm was used to describe observed sorption phenomena. The {Delta}G{sup 0} became negative as the temperature increased, and so the equilibrium constant decreased slightly. The investigation proved that the HAs are suitable materials for the studied heavy metal ion removal from aqueous solution and could be considered as potential material for purification of effluent polluted with toxic metal ions.

  20. Formulation of humic-based soil conditioners

    NASA Astrophysics Data System (ADS)

    Amanova, M. A.; Mamytova, G. A.; Mamytova, B. A.; Kydralieva, K. A.; Jorobekova, Sh. J.

    2009-04-01

    The goal of the study is to prepare soil conditioners (SC) able to carry out the following functions: (i) the chemical conditioning of soil mainly comprising the adjustment of pH, (ii) the balancing of inorganic nutrients, (iii) the physical conditioning of soil mainly comprising the improvement of water permeability, air permeability and water retention properties, and (iv) improvement of the ecological system concerning of useful microorganisms activity in the soil. The SC was made of a mixture of inorganic ingredients, a chemical composition and physical and chemical properties of which promoted improvement of physical characteristic of soil and enrichment by its mineral nutritious elements. In addition to aforesaid ingredients, this soil conditioner contains agronomical-valued groups of microorganisms having the function promoting the growth of the crop. As organic component of SC humic acids (HA) was used. HA serve many major functions that result in better soil and plant health. In soil, HA can increase microbial and mycorrhizal activity while enhancing nutrient uptake by plant roots. HA work as a catalyst by stimulating root and plant growth, it may enhance enzymatic activity that in turn accelerates cell division which can lead to increased yields. HA can help to increase crop yields, seed germination, and much more. In short, humic acids helps keep healthy plants health. The first stage goal was to evaluate mineral and organic ingredients for formulation of SC. Soil conditioners assessed included ash and slag. The use of slags has been largelly used in agriculture as a source of lime and phosphoric acid. The silicic acid of slags reduces Al-acitivity thus, promoting a better assimilation of P-fertilizer by plants. Additionally, silicic acid is also known to improve soil moisture capacity, thus enhancing soil water availability to plants. Physico-chemical characteristics of ash and slag were determined, as a total - about 20 samples. Results include

  1. Properties of the low-lying electronic states of phenanthrene: Exact PPP results

    SciTech Connect

    Chakrabarti, A.; Ramasesha, S.

    1996-10-05

    The authors report properties of the exact low-lying states of phenanthrene, its anion and dianion within the Pariser-Parr-Pople (PPP) model. The experimentally known singlet states of the neutral molecule are well reproduced by the model. The intensities for one and two photon absorption to various single states are also in good agreement with experiment. From the bond orders of these states, the authors predict the equilibrium geometries. The relaxation energies of these states, computed from charge-charge correlations and bond orders, are presented. The authors also present results of ring current calculations in the singlet ground state of phenanthrene. The authors have also reported energies, spin densities, bond orders, and relaxation energies of several triplet states and compared then with experiments as well as with other calculations, where available. The fine structure constants D and E, computed in the lowest triplet state, compare well with those obtained from experiments. These properties are also presented for the anions and the dianions. The PPP model in these cases predicts a low-energy (< 1 eV) dipole excitation. 31 refs., 4 figs., 9 tabs.

  2. Crystal structure, electronic properties, and superconductivity mechanism of La-Phenanthrene

    NASA Astrophysics Data System (ADS)

    Naghavi, Shahab; Fabrizio, Michele; Qin, Tao; Tosatti, Erio

    2013-03-01

    Recently, polycyclic aromatic hydrocarbon (PAH) molecular solids: picene, coronene, dibenzopentacene, phenanthrene among them, have been reported to turn from insulating to metallic and superconducting upon intercalation of electron-donating atoms, such as K, Ba, La. Despite experimental uncertainties, understanding these novel light-element based superconductors is important since both electron phonon coupling and electron electron correlations seem important, as indicated by early theory work. Choosing La-Phenanthrene (La-PA) as our working case, we first search for the theoretical optimal crystal structure and electronic properties by first principles density functional calculations. We single out a stable insulating phase with P 1 symmetry and, slightly higher in energy, a metastable metallic P21 phase-the same (higher) symmetry of pristine PA, also proposed for La-PA. A tight binding model representing the metallic La-PA electronic structure, its dominant electron phonon coupling with an intermolecular dimerizing mode, and an intramolecular Coulomb U is formulated and discussed. In that model it can be argued that BCS pairing may be essentially unhindered by the Coulomb repulsion. Being symmetry-based, the mechanism could apply to other PAH superconductors as well. Supported by EU-Japan Project LEMSUPER

  3. Determination of phenanthrene by antibody-coated competitive real-time immuno-PCR assay.

    PubMed

    Zhou, Chun; Wang, Qiong-E; Zhuang, Hui-Sheng

    2008-08-01

    A reliable selective and sensitive antibody-coated competitive real-time immuno-PCR (RT-IPCR) assay for the determination of phenanthrene (PH) was developed. Phenanthrene butanoic acid (gamma-oxo-PHA) was synthesized as the hapten of PH. An active ester method was used to couple the PHA to bovine serum albumin to form an artificial immune antigen. Male New Zealand white rabbits were immunized with immune antigen to obtain polyclonal antibodies, with which a novel RT-IPCR assay for determination of PH was developed. Under the optimized assay conditions, PH can be determined in the concentration range from 10 fg/mL to 100 pg/mL with a detection limit of 5 fg/mL. The cross-reactivities of the anti-PH antibody to seven structurally related compounds were below 12.5%. Some environmental water samples were analyzed with satisfactory results, which showed good accuracy and suitability to analyze PH in environmental water. Compared with high-performance liquid chromatography, the recovery was lower or higher with agitation but would still be acceptable for use in an on-site field test to provide rapid, semiquantitative, and reliable test results for making environmental decisions. PMID:18587564

  4. The effect of solvent-conditioning on soil organic matter sorption affinity for diuron and phenanthrene.

    PubMed

    Ahangar, Ahmad Gholamalizadeh; Smernik, Ronald J; Kookana, Rai S; Chittleborough, David J

    2009-08-01

    The effect of solvent-conditioning on the sorption of diuron and phenanthrene was investigated. The organic carbon-normalized sorption coefficients (K(OC)) for diuron and phenanthrene (determined from single initial concentrations of 0.8mgL(-1) and 1.5mgL(-1), respectively) were consistently higher following solvent-conditioning of a whole soil with five organic solvents (acetonitrile, acetone, methanol, chloroform and dichloromethane). The relative increase in K(OC) was inversely related to the polarity of the conditioning solvent (i.e. greater increases in K(OC) were observed for the least polar solvents: chloroform and dichloromethane). The effect of solvent-conditioning on the sorption properties of the same soil that had been lipid-extracted using accelerated solvent extraction (ASE) was also investigated. Since lipid extraction involves treatment with a non-polar solvent (95:5 dichloromethane:methanol) one may have expected no further increase in K(OC) on solvent-conditioning. On the contrary, the lipid-extracted soil exhibited very similar increases in K(OC) as the whole soil. This demonstrated that lipid removal and solvent-conditioning, which both increased K(OC) for this soil, are quite separate phenomena. PMID:19435638

  5. Interaction of humic acids and humic-acid-like polymers with herpes simplex virus type 1

    NASA Astrophysics Data System (ADS)

    Klöcking, Renate; Helbig, Björn

    The study was performed in order to compare the antiviral activity against herpes simplex virus type 1 (HSV-1) of synthetic humic-acid-like polymers to that of their low-molecular-weight basic compounds and naturally occurring humic acids (HA) in vitro. HA from peat water showed a moderate antiviral activity at a minimum effective concentration (MEC) of 20 µg/ml. HA-like polymers, i.e. the oxidation products of caffeic acid (KOP), hydrocaffeic acid (HYKOP), chlorogenic acid (CHOP), 3,4-dihydroxyphenylacetic acid (3,4-DHPOP), nordihydroguaretic acid (NOROP), gentisinic acid (GENOP), pyrogallol (PYROP) and gallic acid (GALOP), generally inhibit virus multiplication, although with different potency and selectivity. Of the substances tested, GENOP, KOP, 3,4-DHPOP and HYKOP with MEC values in the range of 2 to 10 µg/ml, proved to be the most potent HSV-1 inhibitors. Despite its lower antiviral potency (MEC 40 µg/ml), CHOP has a remarkable selectivity due to the high concentration of this polymer that is tolerated by the host cells (>640 µg/ml). As a rule, the antiviral activity of the synthetic compounds was restricted to the polymers and was not preformed in the low-molecular-weight basic compounds. This finding speaks in favour of the formation of antivirally active structures during the oxidative polymerization of phenolic compounds and, indirectly, of corresponding structural parts in different HA-type substances.

  6. Photogeneration of singlet oxygen by humic substances: comparison of humic substances of aquatic and terrestrial origin.

    PubMed

    Paul, Andrea; Hackbarth, Steffen; Vogt, Rolf D; Röder, Beate; Burnison, B Kent; Steinberg, Christian E W

    2004-03-01

    The singlet oxygen (1(O2)) luminescence of 27 isolated humic substances (HS), natural organic matter, ultrafiltrates, and the synthetic fulvic acid HS1500 has been investigated by time-resolved spectroscopy in buffered D(2)O. The samples include both reverse osmosis isolates from lakes in Scandinavia, Canada, and Germany, and IHSS fulvic and humic acids of aquatic and terrestrial origin. The quantum yields of 1(O2) formation (PhiDelta) obtained on laser excitation at 480 nm ranged between 0.06 (HS1500) and 2.7%(fulvic acid from soil, IHSS). In our study, a general trend towards higher PhiDelta in terrestrial HS was observed. The comparison of reverse osmosis isolates from surface waters collected during fall 1999 and spring 2000 from five Scandinavian sites yielded, in all cases, higher PhiDelta for the spring samples. For the aquatic sampling sites Hietajarvi and Birkenes, PhiDelta even exceeded values of 0.6%, which were found to be typical for terrestrial or soil water material. Investigation of the excitation wavelength dependence of PhiDelta in the spectral range 355-550 nm yielded different spectral shapes for aquatic HS and "non-aquatic" HS, respectively. On the basis of these excitation spectra, 1(O2) production rates were calculated for eight representative HS. PMID:14993944

  7. Immobilized humic substances and immobilized aggregates of humic substances as sorbent for solid phase extraction.

    PubMed

    Erny, Guillaume L; Gonçalves, Bruna M; Esteves, Valdemar I

    2013-09-01

    In this work, humic substances (HS) immobilized, as a thin layer or as aggregates, on silica gel were tested as material for solid phase extraction. Some triazines (simazine, atrazine, therbutylazine, atrazine-desethyl-desisopropyl-2-hydroxy, ametryn and terbutryn), have been selected as test analytes due to their environmental importance and to span a large range of solubility and octanol/water partition coefficient (logP). The sorbent was obtained immobilizing a thin layer of HS via physisorption on a pre-coated silica gel with a cationic polymer (polybrene). While the sorbent could be used as it is, it was demonstrated that additional HS could be immobilized, via weak interactions, to form stable humic aggregates. However, while a higher quantity of HS could be immobilized, no significant differences were observed in the sorption parameters. This sorbent have been tested for solid phase extraction to concentrate triazines from aqueous matrixes. The sorbent demonstrated performances equivalent to commercial alternatives as a concentration factor between 50 and 200, depending on the type of triazines, was obtained. Moreover the low cost and the high flow rate of sample through the column allowed using high quantity of sorbent. The analytical procedure was tested with different matrixes including tap water, river water and estuarine water. PMID:23916952

  8. Binding of pyrene to aquatic and commercial humic substances: The role of molecular weight and aromaticity

    USGS Publications Warehouse

    Chin, Y.-P.; Aiken, G.R.; Danielsen, K.M.

    1997-01-01

    The binding of pyrene to a number of humic substances isolated from various aquatic sources and a commercial humic acid was measured using the solubility enhancement method. The humic materials used in this study were characterized by various spectroscopic and liquid chromatography methods. A strong correlation was observed between the pyrene binding coefficient, K(doc), and the molecular weights, molar absorptivities at 280 nm, and aromaticity of the aquatic humic substances. Binding of pyrene to the commercial humic acid, however, was significantly stronger and did not obey the relationships observed between K(doc) and the chemical properties of the aquatic humic substrates. These results suggest that the molecular weight and the aromatic content of the humic substrates exert influences on the binding of nonpolar and planar aromatic molecules and that the physicochemical properties of both humic materials and organic solutes are important in controlling the speciation of nonpolar organic contaminants in natural waters.

  9. FORMATION OF ACIDIC TRACE ORGANIC BY-PRODUCTS FROM THE CHLORINATION OF HUMIC ACIDS

    EPA Science Inventory

    A method for concentrating and analyzing acidic trace organics produced by the chlorination of humic acids at concentrations approximating common drinking water levels is described. Data are compared from several humic acid sources. Specific compound analyses of the extracts were...

  10. FLUORESCENCE CHARACTERIZATION OF IHSS HUMIC SUBSTANCES: TOTAL LUMINESCENCE SPECTRA WITH ABSORBANCE CORRECTION. (R822251)

    EPA Science Inventory

    Total luminescence spectroscopy was applied to the fluorescence characterization of humic substances obtained from the International Humic Substances Society (IHSS). Results show that total luminescence spectra, represented as excitation-emission matrices (EEMs), may be used to d...

  11. QUANTITATIVE FOURIER TRANSFORM INFRARED SPECTROSCOPIC INVESTIGATION OF HUMIC SUBSTANCE FUNCTIONAL GROUP COMPOSITION

    EPA Science Inventory

    Infrared (IR) spectroscopy has been widely used for the structural investigation of humic substances. Although Fourier Transform Infrared (FTIR) instrumentation has been available for sometime, relatively little work with these instruments has been reported for humic substances,...

  12. Capillary Electrophoresis Profiles and Fluorophore Components of Humic Acids in Nebraska Corn and Philippine Rice Soils

    Technology Transfer Automated Retrieval System (TEKTRAN)

    As humic substances represent relatively high molecular mass polyelectrolytes containing aromatic, aliphatic and heterocyclic subunits, capillary electrophoresis (CE) has become an attractive method for “finger-print” characterization of humic acids. In addition, fluorescence excitation-emission ma...

  13. INFLUENCE OF BORATE BUFFERS ON THE ELECTROPHORETIC BEHAVIOR OF HUMIC SUBSTANCES IN CAPILLARY ZONE ELECTROPHORESIS

    EPA Science Inventory

    The influence of tetrahydroxyborate ions on the electrophoretic mobility of humic acids was evaluated by capillary electrophoresis (CE). Depending on the molarity of borate ions in the separation buffer, the humic acids exhibit electropherograms with sharp peaks consistently exte...

  14. Potentiometric titration and equivalent weight of humic acid

    USGS Publications Warehouse

    Pommer, A.M.; Breger, I.A.

    1960-01-01

    The "acid nature" of humic acid has been controversial for many years. Some investigators claim that humic acid is a true weak acid, while others feel that its behaviour during potentiometric titration can be accounted for by colloidal adsorption of hydrogen ions. The acid character of humic acid has been reinvestigated using newly-derived relationships for the titration of weak acids with strong base. Re-interpreting the potentiometric titration data published by Thiele and Kettner in 1953, it was found that Merck humic acid behaves as a weak polyelectrolytic acid having an equivalent weight of 150, a pKa of 6.8 to 7.0, and a titration exponent of about 4.8. Interdretation of similar data pertaining to the titration of phenol-formaldehyde and pyrogallol-formaldehyde resins, considered to be analogs for humic acid by Thiele and Kettner, leads to the conclusion that it is not possible to differentiate between adsorption and acid-base reaction for these substances. ?? 1960.

  15. Effects of Outer Membrane Vesicle Formation, Surface-Layer Production and Nanopod Development on the Metabolism of Phenanthrene by Delftia acidovorans Cs1-4

    PubMed Central

    Shetty, Ameesha; Hickey, William J.

    2014-01-01

    Nanopods are extracellular structures arising from the convergence of two widely distributed bacterial characteristics: production of outer membrane vesicles (OMV) and formation of surface layers (S-layers). Nanopod production is driven by OMV formation, and in Delftia acidovorans Cs1-4 growth on phenanthrene induces OMV/nanopod formation. While OMV production has been associated with many functions, particularly with pathogens, linkage to biodegradation has been limited to a membrane stress response to lipophilic compounds. The objectives of this study were to determine: 1.) Whether induction of nanopod formation was linked to phenanthrene metabolism or a non-specific membrane stress response, and 2.) The relative importance of OMV/nanopod formation vs. formation of the S-layer alone to phenanthrene utilization. Membrane stress response was investigated by quantifying nanopod formation following exposure to compounds that exceeded phenanthrene in membrane stress-inducing potential. Naphthalene did not induce nanopod formation, and toluene was a weak inducer compared to phenanthrene (two- vs. six-fold increase, respectively). Induction of nanopod formation by growth on phenanthrene was therefore linked to phenanthrene metabolism and not a membrane stress response. Impacts on phenanthrene biodegradation of OMV/nanopod production vs. S-layer formation were assessed with D. acidovorans Cs1-4 mutants deficient in S-layer formation or OMV/nanopod production. Both mutants had impaired growth on phenanthrene, but the loss of OMV/nanopod production was more significant than loss of the S-layer. The S-layer of D. acidovorans Cs1-4 did not affect phenanthrene uptake, and its primary role in phenanthrene biodegradation process appeared to be enabling nanopod development. Nanopods appeared to benefit phenanthrene biodegradation by enhancing cellular retention of metabolites. Collectively, these studies established that nanopod/OMV formation was an essential characteristic of

  16. Forms and Lability of Phosphorus in Humic Acid Fractions of Hord Silt Loam Soil

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phosphorus (P) has long been known to be present in soil humic fractions, but little is known about specific P forms in humic fractions, or their lability. We extracted the mobile humic acid (MHA) and recalcitrant calcium humate (CaHA) fractions from a Nebraska Hord silt loam soil under continuous c...

  17. Chemical modeling of boron adsorption by humic materials using the constant capacitance model

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The constant capacitance surface complexation model was used to describe B adsorption behavior on reference Aldrich humic acid, humic acids from various soil environments, and dissolved organic matter extracted from sewage effluents. The reactive surface functional groups on the humic materials wer...

  18. Yields of potato and alternative crops impacted by humic product application

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Humic substance (HA—humic acid, fulvic acid, and humin) are a family of organic molecules made up of long carbon chains and numerous active functional groups such as phenols and other aromatics. Humic substances play dynamic roles in soil physical, chemical biological functions essential to soil he...

  19. Application of a membrane model to the sorptive interactions of humic substances.

    PubMed Central

    Wershaw, R L

    1989-01-01

    Humic substances, the dark-colored, natural organic polyelectrolytes that are found in practically all soils, sediments, and natural water, strongly interact with both inorganic and organic pollutants. Inorganic cationic species generally undergo complexation reactions with humic substances. The binding of cations, such as cupric ions, by humic substances often markedly reduces their toxicity to aquatic organisms. Some inorganic anionic species, in the presence of metal ions, are sorbed by humic substances. In these instances the metal ions appear to form bridges between the humic substances and the anions. Several different types of interactions take place between organic compounds and humic materials. Hydrophobic organic species partition into either insoluble or soluble humic substances. The insoluble humic substances will remove hydrophobic organic compounds from the aqueous phase, thereby rendering them less mobile. However, soluble humic substances will solubilize hydrophobic organics, increasing their mobility. Other types of interactions between humic substances and organic compounds, such as adsorption and ion exchange, also have been observed. These various interactions between humic substances and pollutants are important in governing their fate and movement in natural water systems, and, for this reason, a detailed understanding of the mechanisms of the interaction is important. A recently developed membrane model of the structure of humic substances is described; this model enables one to better understand the physical-chemical properties of these materials. Images FIGURE 2. FIGURE 3. PMID:2533555

  20. Synthesis of phenanthrene derivatives through the net [5+5]-cycloaddition of prenylated carbene complexes with 2-alkynylbenzaldehyde derivatives

    PubMed Central

    Menon, Suneetha; Sinha-Mahapatra, Dilip

    2007-01-01

    The reaction of prenylated carbene complexes and 2-alkynylbenzoyl derivatives has been investigated. Phenanthrene derivatives are produced if iodine is added prior to product isolation. Under these conditions alkyl migration reactions occur to form the observed products. The product yields are considerably higher using bis(prenylated) species owing to an increase in the effective molarity of dienophilic entities. PMID:18769535

  1. CeO2 nanoparticles induce no changes in phenanthrene toxicity to the soil organisms Porcellionides pruinosus and Folsomia candida.

    PubMed

    Tourinho, Paula S; Waalewijn-Kool, Pauline L; Zantkuijl, Irene; Jurkschat, Kerstin; Svendsen, Claus; Soares, Amadeu M V M; Loureiro, Susana; van Gestel, Cornelis A M

    2015-03-01

    Cerium oxide nanoparticles (CeO2 NPs) are used as diesel fuel additives to catalyze oxidation. Phenanthrene is a major component of diesel exhaust particles and one of the most common pollutants in the environment. This study aimed at determining the effect of CeO2 NPs on the toxicity of phenanthrene in Lufa 2.2 standard soil for the isopod Porcellionides pruinosus and the springtail Folsomia candida. Toxicity tests were performed in the presence of CeO2 concentrations of 10, 100 or 1000mg Ce/kg dry soil and compared with results in the absence of CeO2 NPs. CeO2 NPs had no adverse effects on isopod survival and growth or springtail survival and reproduction. For the isopods, LC50s for the effect of phenanthrene ranged from 110 to 143mg/kg dry soil, and EC50s from 17.6 to 31.6mg/kg dry soil. For the springtails, LC50s ranged between 61.5 and 88.3mg/kg dry soil and EC50s from 52.2 to 76.7mg/kg dry soil. From this study it may be concluded that CeO2 NPs have a low toxicity and do not affect toxicity of phenanthrene to isopods and springtails. PMID:25499053

  2. UV light-mediated difunctionalization of alkenes with CF3SO2Na: synthesis of trifluoromethyl phenanthrene and anthrone derivatives.

    PubMed

    Li, Bing; Fan, Dan; Yang, Chao; Xia, Wujiong

    2016-06-21

    A metal-free and cost-effective protocol for UV light-mediated difunctionalization of alkenes with CF3SO2Na was developed. This strategy realized the direct formation of Csp(3)-CF3 and C-C bonds through a proposed tandem radical cyclization process, which produced a variety of phenanthrene and anthrone derivatives in moderate yields. PMID:27206267

  3. Chlorination of humic materials: Byproduct formation and chemical interpretations

    USGS Publications Warehouse

    Reckhow, D.A.; Singer, P.C.; Malcolm, R.L.

    1990-01-01

    Ten aquatic humic and fulvic acids were isolated and studied with respect to their reaction with chlorine. Yields of TOX, chloroform, trichloroacetic acid, dichloroacetic acid, dichloroacetonitrile, and 1,1,1-trichloropropanone were measured at pH 7 and 12. Humic acids produced higher concentrations than their corresponding fulvic acids of all byproducts except 1,1,1-trichloropropanone. Chlorine consumption and byproduct formation were related to fundamental chemical characteristics of the humic materials. A statistical model was proposed for activated aromatic content based on 13C NMR and base titration data. The values estimated from this model were found to be well correlated with chlorine consumption. Specific byproduct formation was related to UV absorbance, nitrogen content, or the activated aromatic content. ?? 1990 American Chemical Society.

  4. Effects of humic acids on the growth of bacteria

    NASA Astrophysics Data System (ADS)

    Tikhonov, V. V.; Yakushev, A. V.; Zavgorodnyaya, Yu. A.; Byzov, B. A.; Demin, V. V.

    2010-03-01

    The influence of humic acids of different origins on the growth of bacterial cultures of different taxa isolated from the soil and the digestive tracts of earthworms ( Aporrectodea caliginosa)—habitats with contrasting conditions—was studied. More than half of the soil and intestinal isolates from the 170 tested strains grew on the humic acid of brown coal as the only carbon source. The specific growth rate of the bacteria isolated from the intestines of the earthworms was higher than that of the soil bacteria. The use of humic acids by intestinal bacteria confirms the possibility of symbiotic digestion by earthworms with the participation of bacterial symbionts. Humic acids at a concentration of 0.1 g/l stimulated the growth of the soil and intestinal bacteria strains (66 strains out of 161) on Czapek’s medium with glucose (1 g/l), probably, acting as a regulator of the cell metabolism. On the medium with the humic acid, the intestinal bacteria grew faster than the soil isolates did. The most active growth of the intestinal isolates was observed by Paenibacillus sp., Pseudomonas putida, Delftia acidovorans, Microbacterium terregens, and Aeromonas sp.; among the soil ones were the representatives of the Pseudomonas genus. A response of the bacteria to the influence of humic acids was shown at the strain level using the example of Pseudomonas representatives. The Flexom humin preparation stimulated the growth of the hydrocarbon-oxidizing Acinetobacter sp. bacteria. This effect can be used for creating a new compound with the elevated activity of bacteria that are destroyers of oil and oil products.

  5. Low molecular weight species in humic and fulvic fractions

    USGS Publications Warehouse

    Wilson, M.A.; Collin, P.J.; Malcolm, R.L.; Perdue, E.M.; Cresswell, P.

    1988-01-01

    Fourier transform solution 1H nuclear magnetic resonance (NMR) spectrometry with homogated water peak irradiation is a useful method for detecting low molecular weight substances in humic extracts. Succinate, acetate, methanol, formate, lactate and some aryl methoxyl compounds have been detected in extracts from a wide range of sources. In view of the controversy over whether low molecular weight substances are contaminants in humic extracts introduced by the concentration procedure, we report that some of these materials are not contaminants since 1H-NMR can be used to follow their formation from higher molecular weight species. ?? 1988.

  6. In situ fluorescence measurements of protein-, humic- and HAP-like materials in the Northwestern Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Tedetti, Marc; Bachet, Caroline; Germain, Chloé; Ferretto, Nicolas; Bhairy, Nagib; Guigue, Catherine; Besson, Florent; Beguery, Laurent; Goutx, Madeleine

    2015-04-01

    Understanding the biogeochemical functioning of the ocean requires high frequency measurements of dissolved organic matter (DOM) descriptors. For 10 years, the technological developments of fluorescence sensors try to cover this need. In this context, our laboratory developed the MiniFluo-UV sensor, a prototype of miniaturized submersible fluorometer for the detection of aromatic compounds that fluoresce in the UV spectral domain. The qualification of the sensor consisted in measurements of drift, linearity, repeatability, sensitivity to light, temperature and pressure, and detection limits of phenanthrene (HAP) and tryptophan (aromatic amino acid) in standard solutions. Measurements were also conducted in crude oil water soluble fractions (WSFs). The MiniFluo-UV sensor was then deployed in two distinct areas of the Northwestern Mediterranean Sea: 1) in the Gulf of Lion during the continuous monitoring of the surface water layer (DEWEX cruise, winter and spring 2013) and 2) in the Bay of Marseilles, heavily impacted by urban activities, where the sensor was mounted onto the SeaExplorer underwater glider and onto a CTD vertical profiler (July-December 2014). These platforms were also equipped with a humic-like fluorescence sensor and other sensors for hydrological and biogeochemical parameters (T, S, Chla, oxygen, turbidity). The patterns of fluorescence signatures enabled to distinguish interesting distributions of DOM in relation with hydrological features and spring biological production in the Gulf of Lion, and showed the accumulation of contaminants in marine areas under anthropogenic pressure. This work was conducted within the framework of the ANR-09-ECOT-009-01 "IBISCUS" in collaboration with ALSEAMAR-ALCEN (Aix-en-Provence) and MicroModule (Brest) companies. It is relevant to WP5 NEXOS objectives. The SACEUP team of the DEWEX-MERMEX experiment is warmly acknowledged.

  7. Humic first, A new theory on the origin of life

    NASA Astrophysics Data System (ADS)

    Daei, Mohammad Ali; Daei, Manijeh

    2016-04-01

    In 1953, Miller &Urey through a brilliant experiment demonstrated that the building blocks of life could evolve in primitive earth conditions1. In recent years scientists revealed that organic matters are not very rare compounds in comets, asteroids, and meteorites2. These facts show simple organic molecules on early earth could be quite enough to start development of life. But, how? Many theorists have tried to explain how life emerged from non life, but failed2. There is a huge gap between the simple building blocks, like amino acid, sugar, and lipid molecules, to a living cell with a very sophisticated structure and organization. Obviously, creation of a cell needed a qualified production line which had to be durable and active, can gather all biochemical ingredients, protect them from degradation, have catalyzing ability, provide numerous opportunities for interaction between basic molecules, and above all, have capability to react to different sources of energy. We are sure this perfect factory was available on primitive earth and is nothing except humic substance! At the moment, HS, are doing nearly all of these duties, among the others, under your feet in agricultural soils4. What are humic substances? According to IHSS definition "Humic substances (HS) are major components of the natural organic matter (NOM) in soil and water as well as in geological organic deposits such as lake sediments, peats, brown coals, and shales5." They come from polymerization of organic molecules, but looking at them like a simple aggregation of different organic molecules, is a huge mistake6! It seems they do not come together except for making a capable structure! HS are the first organic machinery which appeared in proplanetary disk, more than four billion years ago. Derived from simple inorganic molecules, humic substances construct a firm intermediate structure which connects none life to life. In other word, life road pass over the humic bridge. This does not mean that

  8. The contribution of humic substances to the acidity of colored natural waters

    USGS Publications Warehouse

    Oliver, B.G.; Thurman, E.M.; Malcolm, R.L.

    1983-01-01

    An operationally defined carboxyl content of humic substances extracted from rivers, streams, lakes, wetlands, and groundwaters throughout the United States and Canada is reported. Despite the diversity of the samples, only small variations were observed in this humic carboxyl content. The dissociation behavior of two combined fulvic/humic acid extracts was studied and it was found that the dissociation of the humics varied in a predictable manner with pH. Using a carboxyl content of 10 ??eq/ mg humic organic carbon, and mass action quotient calculated from sample pH, the ionic balances of three highly colored Nova Scotia rivers were estimated. ?? 1983.

  9. Interactions of dissolved humic substances with oppositely charged fluorescent dyes for tracer techniques.

    PubMed

    Hafuka, Akira; Ding, Qing; Yamamura, Hiroshi; Yamada, Koji; Satoh, Hisashi

    2015-11-15

    To investigate interactions between oppositely charged fluorescent dyes and dissolved humic substances, fluorescence quenching of fluorescein and rhodamine 6G with dissolved humic substances was performed. Binding coefficients were obtained by the Stern-Volmer equation. The fluorescence of rhodamine 6G was largely quenched by the addition of humic acid and a non-linear Stern-Volmer plot was obtained. This strong quenching may be caused by the electrostatic interaction between cationic rhodamine 6G and humic acid and strengthened by the hydrophobic repulsion. In contrast, the quenching and interactive effects of dissolved humic substances for fluorescein were relatively weak. PMID:26318652

  10. NAH plasmid-mediated catabolism of anthracene and phenanthrene to naphthoic acids.

    PubMed Central

    Menn, F M; Applegate, B M; Sayler, G S

    1993-01-01

    Pseudomonas fluorescens 5R contains an NAH7-like plasmid (pKA1), and P. fluorescens 5R mutant 5RL contains a bioluminescent reporter plasmid (pUTK21) which was constructed by transposon mutagenesis. Polymerase chain reaction mapping confirmed the localization of lux transposon Tn4431 300 bp downstream from the start of the nahG gene. Two degradation products, 2-hydroxy-3-naphthoic acid and 1-hydroxy-2-naphthoic acid, were recovered and identified from P. fluorescens 5RL as biochemical metabolites from the biotransformation of anthracene and phenanthrene, respectively. This is the first report which provides direct biochemical evidence that the naphthalene plasmid degradative enzyme system is involved in the degradation of higher-molecular-weight polycyclic aromatic hydrocarbons other than naphthalene. Images PMID:8328810

  11. Quantitative relationship between mutagenicity and structure of heterocyclic analogs of pyrene and phenanthrene

    SciTech Connect

    Baskin, I.I.; Lyubimova, I.K.; Abilev, S.K.

    1994-12-31

    In this work, the authors investigated quantitative relationships between mutagenicity and chemical structures of certain heterocyclic analogs of pyrene and phenanthrene that have yet to be examined. Compounds were synthesized using the methods described earlier. The compounds were tested for mutagenic activity by Ames` method. They used the strain Salmonella typhimurium TA1538 (his D3052, rfa, uvr), which registered the reading frame shift mutations. Analysis of the data suggests that the most considerable increases in mutagenicity occur with two nitro groups at positions 2 and 7. When nitro groups occur at other positions, the molecule displayed no mutagenicity, irrespective of the number of groups. Two amino groups at the same position, one amino and one carboxyl group, or chlorine atoms impart a weaker mutagenicity to the molecule. The mutagenic properties were lost on shifting the amino groups from positions 2,7 to 1,6.

  12. Mechanisms of humic substances degradation by fungi

    NASA Astrophysics Data System (ADS)

    Chen, Y.; Hadar, Y.; Grinhut, T.

    2012-04-01

    Humic substances (HS) are formed by secondary synthesis reactions (humification) during the decay process and transformation of biomolecules originating from plants and other dead organisms. In nature, HS are extremely resistant to biological degradation. Thus, these substances are major components in the C cycle and in the biosphere and therefore, the understanding of the process leading to their formation and transformation and degradation is vital. Fungi active in the decomposition process of HS include mainly ascomycetes and basidiomycetes that are common in the upper layer of forest and grassland soils. Many basidiomycetes belong to the white-rot fungi (WRF) and litter-decomposing fungi (LDF). These fungi are considered to be the most efficient lignin degraders due to their nonspecific oxidizing enzymes: manganese peroxidase (MnP), lignin peroxidase (LiP) and laccase. Although bacteria dominate compost and participate in the turnover of HS, their ability to degrade stable macromolecules such as lignin and HS is limited. The overall objectives of this research were to corroborate biodegradation processes of HS by WRF. The specific objectives were: (i) To isolate, identify and characterize HS degrading WRF from biosolids (BS) compost; (ii) To study the biodegradation process of three types of HS, which differ in their structure, by WRF isolated from BS compost; and (iii) To investigate the mechanisms of HA degradation by WRF using two main approaches: (a) Study the physical and chemical analyses of the organic compounds obtained from direct fungal degradation of HA as well as elucidation of the relevant enzymatic reactions; and (b) Study the enzymatic and biochemical mechanisms involved during HA degradation. In order to study the capability of fungi to degrade HS, seventy fungal strains were isolated from biosolids (BS) compost. Two of the most active fungal species were identified based on rDNA sequences and designated Trametes sp. M23 and Phanerochaetesp., Y6

  13. Application of a membrane model to the sorptive interactions of humic substances

    SciTech Connect

    Wershaw, R.L. )

    1989-11-01

    Humic substances, the dark-colored, natural organic polyelectrolytes that are found in practically all soils, sediments, and natural water, strongly interact with both inorganic and organic pollutants. Inorganic cationic species generally undergo complexation reactions with humic substances. The binding of cations, such as cupric ions, by humic substances often markedly reduces their toxicity to aquatic organisms. Some inorganic anionic species, in the presence of metal ions, are sorbed by humic substances. In these instances the metal ions appear to form bridges between the humic substances and the anions. Several different types of interactions take place between organic compounds and humic materials. Hydrophobic organic species partition into either insoluble or soluble humic substances. The insoluble humic substances will remove hydrophobic organic compounds from the aqueous phase, thereby rendering them less mobile. However, soluble humic substances will solubilize hydrophobic organics, increasing their mobility. These various interactions between humic substances and pollutants are important in governing their fate and movement in natural water systems, and, for this reason, a detailed understanding of the mechanisms of the interaction is important. A recently developed membrane model of the structure of humic substances is described.

  14. Transformation of chlorinated phenols and anilines in the presence of humic acid

    SciTech Connect

    Park, J.W.; Dec, J.; Kim, J.E.; Bollag, J.M.

    2000-02-01

    Incubations of chlorinated phenols and anilines with oxidoreductive catalysts (peroxidase, laccase, tyrosinase, and birnessite) in the presence of humic acid led to oligomerization of the substrates or their binding to organic matter. The effect of humic acid on the overall transformation depended on the substrate, type of catalyst, and the concentration and source of humic acid. At low humic acid concentrations, the transformation of 4-chlorophenol (4-CP) was enhanced, but at higher concentrations of humic acid, no further enhancement occurred. The transformation of 4-chloroaniline (4-CA) was only slightly affected after the addition of humic acid. In experiments with {sup 14}C-labeled substrates, 4-CP was mainly bound to humic acid and formed few oligomers, whereas 4-CA was largely subject to oligomerization with less binding to humic acid. Binding and oligomerization of 4-CP did not change with increasing concentration of humic acid, but with 4-CA, binding increased and oligomerization decreased. It appears that nucleophilic binding of 4-CA depended largely on the availability of carbonyl and quinone groups in humic acid and, therefore, the distribution of the transformed substrate between oligomers and organic matter greatly depended on the source of humic acid.

  15. The uniqueness of humic substances in each of soil, stream and marine environments

    USGS Publications Warehouse

    Malcolm, R.L.

    1990-01-01

    Definitive compositional differences are shown to exist for both fulvic acids and humic acids from soil, stream and marine environments by five different methods (1H and 13C NMR spectroscopy, 14C age and ?? 13C isotopic analyses, amino acid analyses and pyrolysis-mass spectrometry). Definitive differences are also found between fulvic acids and humic acids within each environment. These differences among humic substances from various sources are more readily discerned because the method employed for the isolation of humic substances from all environments excludes most of the non-humic components and results in more purified humic isolates from water and soils. The major compositional aspects of fulvic acids and humic acids which determine the observed characteristic differences in each environment are the amounts and compositions of saccharide, phenolic, methoxyl, aromatic, hydrocarbon, amino acid and nitrogen moieties.

  16. Fluorescence characterization of IHSS humic substances: Total luminescence spectra with absorbance correction

    SciTech Connect

    Mobed, J.J.; Hemmingsen, S.L.; Autry, J.L.; Mcgown, L.B.

    1996-10-01

    Total luminescence spectroscopy was applied to the fluorescence characterization of humic substances obtained from the International Humic Substances Society (IHSS). Results show that total luminescence spectra, represented as excitation-emission matrices (EEMs), may be used to discriminate between soil-derived and aquatic-derived IHSS humic substances and between humic and fulvic acids derived from the same source (soil or aquatic). Ionic strength in the range of 0-1 M KCl and humic substance concentration in the range 5-100 mg/L had little effect on the fluorescence spectral characteristics of the humic substances, while pH had significant effects as expected. Absorbance correction was shown to be essential for accurate representation and comparison of the EEMs of the humic substances at high concentrations. 16 refs., 5 figs., 3 tabs.

  17. **1**5N-NMR INVESTIGATION OF HYDROXYLAMINE DERIVATIZED HUMIC SUBSTANCES.

    USGS Publications Warehouse

    Thorn, Kevin A.; Arterburn, Jeffrey B.; Mikita, Michael A.

    1986-01-01

    Humic substances are the most abundant naturally occurring refactory organic compounds in soils and water. They have a broad range of physical, chemical and physiological properties. In soils, humic substances contribute to the cation exchange capacity, help maintain the physical structure, and play a role in plant growth and nutrition. In aquatic systems, humic substances serve to regulate the levels of inorganic constituents, yield trihalomethanes upon chlorination, and transport or concentrate organic and inorganic pollutants. The oxygen containing functional groups of humic and fulvic acids are believed to play a key role in the chemical properties of humic substances. This study was undertaken to gain additional information on the specific types of oxygen functionalities in humic substances. Since the analysis of hydroxyl moieties had been earlier established, we focused our attention on the analysis of ketone and aldehyde functional groups in humic substances.

  18. Characterization of humic acids by two-dimensional correlation fluorescence spectroscopy

    NASA Astrophysics Data System (ADS)

    Nakashima, K.; Xing, Shaoyong; Gong, Yongkuan; Miyajima, Toru

    2008-07-01

    We have investigated interaction between humic acids and heavy metal ions by fluorescence spectroscopy. The humic acids examined are Aldrich humic acid (AHA) and Dando humic acid (DHA), and heavy metal ions are Cu 2+ and Pb 2+. The binding constants between the humic acids and the heavy metal ions are obtained by a conventional fluorescence quenching technique. The two prominent bands in the fluorescence spectra of the humic acids give different binding constants, implying that the two bands are originated from different fluorescent species in the matrices of the humic acids. This was confirmed by two-dimensional correlation analysis based on the quenching perturbation on the fluorescence spectra. Two prominent cross peaks corresponding to the two fluorescence bands are obtained in the asynchronous maps, indicating that the two fluorescence bands belong to different species. The order of the response of the two fluorescence bands to the quenching perturbation is also elucidated based on Noda's rule.

  19. Can humic products become mainstream amendments for improving crop production?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Humic products have been used in cropland production for several decades but only by small numbers of farmers. Appreciable proportions of field studies demonstrate efficacy of the products for numerous crops, justifying their further evaluation. Their adoption by mainstream farmers could be accelera...

  20. Ozonization of humic acids in brown coal oxidized in situ

    SciTech Connect

    S.A. Semenova; Yu.F. Patrakov; M.V. Batina

    2008-10-15

    The effect of the ozonization of humic acids in chloroform and glacial acetic acid media on the yield and component composition of the resulting products was studied. The high efficiency of ozonization in acetic acid was found. Water-soluble low-molecular-weight substances were predominant among the ozonization products.

  1. Molecular weight, polydispersity, and spectroscopic properties of aquatic humic substances

    USGS Publications Warehouse

    Chin, Y.-P.; Aiken, G.; O'Loughlin, E.

    1994-01-01

    The number- and weight-averaged molecular weights of a number of aquatic fulvic acids, a commercial humic acid, and unfractionated organic matter from four natural water samples were measured by high-pressure size exclusion chromatography (HPSEC). Molecular weights determined in this manner compared favorably with those values reported in the literature. Both recent literature values and our data indicate that these substances are smaller and less polydisperse than previously believed. Moreover, the molecular weights of the organic matter from three of the four natural water samples compared favorably to the fulvic acid samples extracted from similar environments. Bulk spectroscopic properties of the fulvic substances such as molar absorptivity at 280 nm and the E4/E6 ratio were also measured. A strong correlation was observed between molar absorptivity, total aromaticity, and the weight average molecular weights of all the humic substances. This observation suggests that bulk spectroscopic properties can be used to quickly estimate the size of humic substances and their aromatic contents. Both parameters are important with respect to understanding humic substance mobility and their propensity to react with both organic and inorganic pollutants. ?? 1994 American Chemical Society.

  2. Humic acids from mechanically treated coals: a review

    SciTech Connect

    A.G. Proidakov

    2009-02-15

    In this review, attention is focused on the prospects of the use of mechanochemical activation and mechanical oxidative degradation of starting raw materials in order to increase the yield of isolated humic preparations and to modify their properties as biologically active compounds. 87 refs., 1 tab.

  3. Order of functionality loss during photodegradation of aquatic humic substances

    USGS Publications Warehouse

    Thorn, Kevin A.; Younger, Steven J.; Cox, Larry G.

    2009-01-01

    The time course photodegradation of the Nordic aquatic fulvic and humic acids and Suwannee River XAD-4 acids subjected to UV irradiation with an unfiltered medium pressure mercury lamp was studied by liquid-state 13C nuclear magnetic resonance. Photodecarboxylation was a significant pathway in all cases. Decreases in ketone, aromatic, and O-alkyl carbons were observed throughout the course of the irradiations, whereas C-alkyl carbons resisted photodegradation. Peaks attributable to the low-molecular-weight photodegradation products bicarbonate, formate, acetate, and succinate grew in intensity with irradiation time. The final products of the irradiations were decarboxylated, hydrophobic, predominantly C-alkyl and O-alkyl materials that were resistant to further photodegradation. The total amount of carbon susceptible to loss appeared to be related mainly to the total concentration of carbonyl and aromatic carbons and partly to the concentration of O-alkyl carbons in the fulvic, humic, and XAD-4 acids. The carbon losses for Nordic fulvic, Nordic Humic, Suwannee fulvic, and Suwannee XAD-4 acids were estimated to be 75, 63, 56, and 17%, respectively. More detailed analyses of the effects of irradiation on the carbonyl functionality in Nordic humic acid and Laurentian soil fulvic acid through reaction with hydroxylamine in conjunction with 15N nuclear magnetic resonance analysis confirmed preferential photodegradation of the quinone/hydroquinone functionality over ketone groups and the loss of ester groups in Laurentian fulvic acid.

  4. CONDUCTOMETRIC CHARACTERIZATION OF DISSOLVED HUMIC MATERIALS. (R828158)

    EPA Science Inventory

    Conductometric replacement titrations of humic and fulvic acids dissolved in a slight excess of hydroxide were carried out with standard acid. The slope of the titration curve corresponding to the protonation of humate/fulvate was related to the electrophoretic mobility of the...

  5. Humic first, A new theory on the origin of life

    NASA Astrophysics Data System (ADS)

    Daei, Mohammad Ali; Daei, Manijeh

    2016-04-01

    In 1953, Miller &Urey through a brilliant experiment demonstrated that the building blocks of life could evolve in primitive earth conditions1. In recent years scientists revealed that organic matters are not very rare compounds in comets, asteroids, and meteorites2. These facts show simple organic molecules on early earth could be quite enough to start development of life. But, how? Many theorists have tried to explain how life emerged from non life, but failed2. There is a huge gap between the simple building blocks, like amino acid, sugar, and lipid molecules, to a living cell with a very sophisticated structure and organization. Obviously, creation of a cell needed a qualified production line which had to be durable and active, can gather all biochemical ingredients, protect them from degradation, have catalyzing ability, provide numerous opportunities for interaction between basic molecules, and above all, have capability to react to different sources of energy. We are sure this perfect factory was available on primitive earth and is nothing except humic substance! At the moment, HS, are doing nearly all of these duties, among the others, under your feet in agricultural soils4. What are humic substances? According to IHSS definition "Humic substances (HS) are major components of the natural organic matter (NOM) in soil and water as well as in geological organic deposits such as lake sediments, peats, brown coals, and shales5." They come from polymerization of organic molecules, but looking at them like a simple aggregation of different organic molecules, is a huge mistake6! It seems they do not come together except for making a capable structure! HS are the first organic machinery which appeared in proplanetary disk, more than four billion years ago. Derived from simple inorganic molecules, humic substances construct a firm intermediate structure which connects none life to life. In other word, life road pass over the humic bridge. This does not mean that

  6. CHEMICAL REACTIONS OF AQUATIC HUMIC MATERIALS WITH SELECTED OXIDANTS

    EPA Science Inventory

    A study was conducted to identify the specific organic reaction products of natural aquatic humic materials with selected oxidants (KMnO4, HOCl, Cl02, O3 and monochloramine). Reaction products were identified by GC/MS after solvent extraction and derivatization. The two most reac...

  7. SUBCHRONIC TOXICOLOGY OF HUMIC ACID FOLLOWING CHLORINATION IN THE RAT

    EPA Science Inventory

    A subchronic 90-day study was conducted with chlorinated and non-chlorinated humic acids with male Sprague-Dawley rats. Body weight gain, terminal organ and body weights, food and fluid consumption, clinical chemistries, hematological parameters, and urinalyses were determined fo...

  8. DEVELOPMENT OF A STATISTICAL MODEL FOR METAL-HUMIC INTERACTIONS

    EPA Science Inventory

    A statistical model for describing the distribution of binding sites in humic substances was developed. he model was applied to study the spectral titration plot generated by the lanthanide ion probe spectroscopy (LIPS) technique. his titration plot is used as a basis for studyin...

  9. [UV-spectrophotometry in drug control. 33. New drugs with benzene, pyridine, quinoline and phenanthrene chromophores in the molecule. 6. The effect of substitution and solvents].

    PubMed

    Krácmar, J; Krácmarová, J; Stejskal, Z

    1987-01-01

    UV-spectra of 14 new substances with benzene, pyridine, quinoline and phenanthrene chromophores as well as influences of substitutes and solvents on shifts of the bands E, K, B and R are discussed. PMID:2953035

  10. Can humic water discharge counteract eutrophication in coastal waters?

    PubMed

    Andersson, Agneta; Jurgensone, Iveta; Rowe, Owen F; Simonelli, Paolo; Bignert, Anders; Lundberg, Erik; Karlsson, Jan

    2013-01-01

    A common and established view is that increased inputs of nutrients to the sea, for example via river flooding, will cause eutrophication and phytoplankton blooms in coastal areas. We here show that this concept may be questioned in certain scenarios. Climate change has been predicted to cause increased inflow of freshwater to coastal areas in northern Europe. River waters in these areas are often brown from the presence of high concentrations of allochthonous dissolved organic carbon (humic carbon), in addition to nitrogen and phosphorus. In this study we investigated whether increased inputs of humic carbon can change the structure and production of the pelagic food web in the recipient seawater. In a mesocosm experiment unfiltered seawater from the northern Baltic Sea was fertilized with inorganic nutrients and humic carbon (CNP), and only with inorganic nutrients (NP). The system responded differently to the humic carbon addition. In NP treatments bacterial, phytoplankton and zooplankton production increased and the systems turned net autotrophic, whereas the CNP-treatment only bacterial and zooplankton production increased driving the system to net heterotrophy. The size-structure of the food web showed large variations in the different treatments. In the enriched NP treatments the phytoplankton community was dominated by filamentous >20 µm algae, while in the CNP treatments the phytoplankton was dominated by picocyanobacteria <5 µm. Our results suggest that climate change scenarios, resulting in increased humic-rich river inflow, may counteract eutrophication in coastal waters, leading to a promotion of the microbial food web and other heterotrophic organisms, driving the recipient coastal waters to net-heterotrophy. PMID:23637807

  11. Bismuth-catalyzed synthesis of polycyclic aromatic hydrocarbons (PAHs) with a phenanthrene backbone via cyclization and aromatization of 2-(2-arylphenyl)vinyl ethers.

    PubMed

    Murai, Masahito; Hosokawa, Naoki; Roy, David; Takai, Kazuhiko

    2014-08-15

    The reaction of 2-(2-arylphenyl)vinyl ethers in the presence of a catalytic amount of bismuth(III) triflate gave substituted phenanthrenes in excellent yields under mild reaction conditions. The reaction was also applied to the construction of other polycyclic aromatic hydrocarbons (PAHs), such as chrysene, helicene, and pyrene having a phenanthrene backbone, via regioselective cyclization. This method has the advantages of easy availability of the cyclization precursors, operational simplicity, and high reaction efficiency. PMID:25076204

  12. Effects of humic substances on the bioconcentration of polycyclic aromatic hydrocarbons: Correlations with spectroscopic and chemical properties of humic substances

    SciTech Connect

    Haitzer, M.; Abbt-Braun, G.; Traunspurger, W.; Steinberg, C.E.W.

    1999-12-01

    The presence of dissolved humic substances (HS, fulvic and humic acids) generally reduces the uptake of hydrophobic organic compounds into aquatic organisms. The extent of this effect depends both on the concentration and on the origin of the HS. The aim of this study was to investigate the role of qualitative differences between HS from different origins. The effects of seven different HS on the bioconcentration of pyrene and benzo[a]pyrene (BaP) in the nematode Caenorhabditis elegans were related to the spectroscopic and chemical properties of the HS. The effect of each humic material on the bioconcentration of pyrene or BaP was quantified as a biologically determined partition coefficient K{sub DOC}. The authors observed significant linear relationships between K{sub DOC} and the atomic H/C ratio, the specific absorptivity at 254 nm, the content of aromatic carbons as determined by {sup 13}C nuclear magnetic resonance spectroscopy, the copper-complexing capacity, the content of phenolic OH groups, and the molecular weight of the HS. There was no discernible relationship of K{sub DOC} with the atomic (N + O)/C ratio, an indicator of the polarity of HS. Taken together, their results show that the variability in the effects of HS from different origins could be related to variations in bulk properties of the HS. Parameters describing the aromaticity of the humic materials seemed to be most useful for estimating effects of HS on the bioconcentration of pyrene and BaP.

  13. Effects of humic substances on the bioconcentration of polycyclic aromatic hydrocarbons: Correlations with spectroscopic and chemical properties of humic substances

    USGS Publications Warehouse

    Haitzer, M.; Abbt-Braun, G.; Traunspurger, W.; Steinberg, C.E.W.

    1999-01-01

    The presence of dissolved humic substances (HS, fulvic and humic acids) generally reduces the uptake of hydrophobic organic compounds into aquatic organisms. The extent of this effect depends both on the concentration and on the origin of the HS. The aim of this study was to investigate the role of qualitative differences between HS from different origins. The effects of seven different HS on the bioconcentration of pyrene and benzo[a]pyrene (BaP) in the nematode Caenorhabditis elegans were related to the spectroscopic and chemical properties of the HS. The effect of each humic material on the bioconcentration of pyrene or BaP was quantified as a 'biologically determined' partition coefficient K(DOC). We observed significant linear relationships between K(DOC) and the atomic H/C ratio, the specific absorptivity at 254 nm, the content of aromatic carbons (as determined by 13C nuclear magnetic resonance spectroscopy, the copper-complexing capacity, the content of phenolic OH groups, and the molecular weight of the HS. There was no discernible relationship of K(DOC) with the atomic (N + O)/C ratio, an indicator of the polarity of HS. Taken together, our results show that the variability in the effects of HS from different origins could be related to variations in bulk properties of the HS. Parameters describing the aromaticity of the humic materials seemed to be most useful for estimating effects of HS on the bioconcentration of pyrene and BaP.

  14. Combined remediation of Cd-phenanthrene co-contaminated soil by Pleurotus cornucopiae and Bacillus thuringiensis FQ1 and the antioxidant responses in Pleurotus cornucopiae.

    PubMed

    Jiang, Juan; Liu, Hongying; Li, Qiao; Gao, Ni; Yao, Yuan; Xu, Heng

    2015-10-01

    Remediation of soil co-contaminated with heavy metals and PAHs by mushroom and bacteria is a novel technique. In this study, the combined remediation effect of mushroom (Pleurotus cornucopiae) and bacteria (FQ1, Bacillus thuringiensis) on Cd and phenanthrene co-contaminated soil was investigated. The effect of bacteria (B. thuringiensis) on mushroom growth, Cd accumulation, phenanthrene degradation by P. cornucopiae and antioxidative responses of P. cornucopiae were studied. P. cornucopiae could adapt easily and grow well in Cd-phenanthrene co-contaminated soil. It was found that inoculation of FQ1 enhanced mushroom growth (biomass) and Cd accumulation with the increment of 26.68-43.58% and 14.29-97.67% respectively. Up to 100% and 95.07% of phenanthrene were removed in the bacteria-mushroom (B+M) treatment respectively spiked with 200mg/kg and 500mg/kg phenanthrene. In addition, bacterial inoculation alleviated oxidative stress caused by co-contamination with relative decreases in lipid peroxidation and enzyme activity, including malondialdehyde (MDA), superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD). This study demonstrated that the integrated remediation strategy of bacteria and mushroom is an effective and promising method for Cd-phenanthrene co-contaminated soil bioremediation. PMID:26117363

  15. Effects of humic acid-metal complexes on hepatic carnitine palmitoyltransferase, carnitine acetyltransferase and catalase activities

    SciTech Connect

    Fungjou Lu; Youngshin Chen . Dept. of Biochemistry); Tienshang Huang . Dept. of Medicine)

    1994-03-01

    A significant increase in activities of hepatic carnitine palmitoyltransferase and carnitine acetyltransferase was observed in male Balb/c mice intraperitoneally injected for 40 d with 0.125 mg/0.1 ml/d humic acid-metal complexes. Among these complexes, the humic acid-As complex was relatively effective, whereas humic acid-25 metal complex was more effective, and humic acid-26 metal complex was most effective. However, humic acid or metal mixtures, or metal such as As alone, was not effective. Humic acid-metal complexes also significantly decreased hepatic catalase activity. A marked decrease of 60-kDa polypeptide in liver cytoplasm was also observed on SDS-polyacrylamide gel electrophoresis after the mice had been injected with the complexes. Morphological analysis of a histopathological biopsy of such treated mice revealed several changes in hepatocytes, including focal necrosis and cell infiltration, mild fatty changes, reactive nuclei, and hypertrophy. Humic acid-metal complexes affect activities of metabolic enzymes of fatty acids, and this results in accumulation of hydrogen peroxide and increase of the lipid peroxidation. The products of lipid peroxidation may be responsible for liver damage and possible carcinogenesis. Previous studies in this laboratory had shown that humic acid-metal complex altered the coagulation system and that humic acid, per se, caused vasculopathy. Therefore, humic acid-metal complexes may be main causal factors of not only so-called blackfoot disease, but also the liver cancer prevailing on the southwestern coast of Taiwan.

  16. The sorption of humic acids to mineral surfaces and their roles in contaminant binding

    SciTech Connect

    Murphy, E.M.; Zachara, J.M.; Smith, S.C.; Phillips, J.L.

    1990-11-01

    Humic substances dissolved in groundwater may adsorb to certain mineral surfaces, rendering hydrophilic surfaces hydrophobic and making them sorbents for hydrophobic organic compounds (HOC). The sorption of humic and fulvic acids (International Humic Substance Society, IHSS, reference samples) on hematite and kaolinite was investigated to determine how natural organic coatings influence HOC sorption. The sorption behavior of the humic substances was consistent with a ligand-exchange mechanism, and the amount of sorption depended on the concentration of hydroxylated surface sites on the mineral and the properties of the humic substance. The sorption of the humic substances to two solids was proportional to their aromatic carbon content and inversely proportional to the O/C ratio. Increasing quantities of sorbed humic substances (f{sub oc}0.01 to 0. 5%) increased the sorption of carbazole, dibenzothiophene, and anthracene. Peat humic acid, the most aromatic coating, showed the greatest sorption enhancement of HOC when sorbed to hematite. In addition, HOC sorption was greater on organic coating formed at low ionic strength (I = 0.005) as compared to higher ionic strength (I = 0.1). We suggest that both the mineral surface and the ionic strength of the electrolyte affect the interfacial configuration of the sorbed humic substance, altering the size or accessibly of hydrophobic domains on the humic molecule to HOC. 30 refs., 5 figs.

  17. [Transportation and transformation of 14C-phenanthrene in closed chamber (nutrient solution-lava-plant-air) system].

    PubMed

    Jiang, X; Ou, Z; Ying, P; Yediler, A; Ketrrup, A

    2001-06-01

    The transportation and transformation of 14C-phenanthrene in a closed 'plant-lava-nutrient solution-air' chamber system was studied by using radioactivity technology. The results showed that in this closed chamber system, phenanthrene was degraded fast. The radioactivity of 14C left at 23d in the nutrient solution was only 25% of applied. At the end of experiment (46d), the distribution sequence of 14C activity in the components of closed chamber system was root (38.55%) > volatile organic compounds (VOCs, 17.68%) > lava (14.35%) > CO2 (11.42%) > stem (2%). 14C-activities in plant tissue were combined with the tissue, and existed in the forms of lava-bound(root 4.68%; stem and leaves 0.68%) and polar metabolites (root 23.14%; stem 0.78%). PMID:11758435

  18. Synthesis, docking, and biological studies of phenanthrene β-diketo acids as novel HIV-1 integrase inhibitors

    PubMed Central

    Sharma, Horrick; Sanchez, Tino W.; Neamati, Nouri; Detorio, Mervi; Schinazi, Raymond F.; Cheng, Xiaolin; Buolamwini, John K.

    2013-01-01

    In the present study we report the synthesis of halogen-substituted phenanthrene β-diketo acids as new HIV-1 integrase inhibitors. The target phenanthrenes were obtained using both standard thermal- and microwave-assisted synthesis. 4-(6-Chlorophenanthren-2-yl)-2,4-dioxobutanoic acid (18) was the most active compound of the series that inhibited both 3′-end processing (3′-P) and strand transfer (ST) with IC50 values of 5 and 1.3 μM, respectively. Docking studies revealed two predominant binding modes that were distinct from the binding modes of raltegravir and elvitegravir, and suggest a novel binding region in the IN active site. Moreover, these compounds do not interact significantly with some of the key amino acids (Q148 and N155) implicated in viral resistance. Therefore, this series of compounds can further be investigated for a possible chemotype to circumvent resistance to clinical HIV-1 IN inhibitors. PMID:24091080

  19. Adsorption of carbamazepine by carbon nanotubes: effects of DOM introduction and competition with phenanthrene and bisphenol A.

    PubMed

    Lerman, Ilya; Chen, Yona; Xing, Baoshan; Chefetz, Benny

    2013-11-01

    Carbon nanotubes, organic contaminants and dissolved organic matter (DOM) are co-introduced into the environment. Thus, the interactions between these components have to be evaluated to better understand their environmental behavior. In this study, single-walled carbon nanotubes (SWCNTs) were used as sorbent, carbamazepine was the primary adsorbate, and bisphenol A and phenanthrene were used as competitors. Strong competition with bisphenol A and no effect of phenanthrene on adsorption of carbamazepine was obtained. The hydrophobic neutral fraction of the DOM exhibited the strongest reductive effect on carbamazepine adsorption, most probably due to interactions in solution. In contrast, the hydrophobic acid fraction decreased carbamazepine adsorption mainly via direct competition. When DOM and bisphenol A were co-introduced, the adsorption of carbamazepine was significantly reduced. This study suggests that the chemical nature of DOM can significantly affect the sorptive behavior of polar organic pollutants with carbon nanotubes when all are introduced to the aquatic system. PMID:23916628

  20. New diagnostic ratios based on phenanthrenes and anthracenes for effective distinguishing heavy fuel oils from crude oils.

    PubMed

    Zhang, Haijiang; Wang, Chuanyuan; Zhao, Ruxiang; Yin, Xiaonan; Zhou, Hongyang; Tan, Liju; Wang, Jiangtao

    2016-05-15

    The heavy fuel oils (HFOs) and crude oils are the main oil types in the marine oil spill accidents in China. It is usually a challenge to distinguish the HFOs from crude oils due to the highly similar physicochemical characteristics. In this paper, the distributions of phenanthrene (Phe), anthracene (Ant), methyl-phenanthrene (MP) and methyl-anthracene (MA) in hundreds of HFOs and crude oils samples which were collected from all over the world were characterized. Nine new diagnostic indexes, such as Ant/(Ant+Phe) and other eight diagnostic ratios based on the MP isomers and MA, were developed for effective distinguishing HFOs from crude oils. The histogram with normal fit plots, the double ratio plots and Bayes discriminant analysis (BDA) method were employed to illustrate the effectiveness of the new diagnostic indexes. BDA model based on nine new diagnostic indexes demonstrated high precision with discriminant ratio which lay between 93.92% and 99.32%. PMID:27016330

  1. Oxidative cyclization reaction of 2-aryl-substituted cinnamates to form phenanthrene carboxylates by using MoCl5.

    PubMed

    Wehming, Kathrin; Schubert, Moritz; Schnakenburg, Gregor; Waldvogel, Siegfried R

    2014-09-22

    The oxidative cyclization reaction of 2-aryl cinnamates and derivatives thereof can be easily performed with MoCl5 as the oxidant. This powerful reagent allows oxidative coupling reactions for which other reagents fail. The best results are obtained when the 2-phenyl substituent of the cinnamate is equipped with two methoxy groups. Even iodo moieties in the bay region of phenanthrene are tolerated under the reaction conditions. If naphthalene moieties are involved, a rearrangement of the skeleton occurs, providing an elegant route to highly functionalized angular arenes. The cyclization is demonstrated for 15 example substrates with isolated yields of up to 99 % for the phenanthrene derivative. The broad scope of the reaction underlines the usefulness of MoCl5 and MoCl5 /TiCl4 in the oxidative coupling reaction. PMID:25043751

  2. Thermal-delayed fluorescence of pyromellitic dianhydride—anthracene trap in charge-transfer pyromellitic dianhyride—phenanthrene host crystal

    NASA Astrophysics Data System (ADS)

    Kozankiewicz, B.

    1990-10-01

    The fluorescence, phosphorescence and delayed fluorescence in an anthracene-doped pyromellitic dianhydride—phenanthrene crystal is studied within the temperature range 200-330 K. The dominating long-lived emission for temperatures above 250 K is thermal-delayed fluorescence, originating from the singlet trap created by thermal promotion of the triplet trap. The trap is formed on the pyromellitic dianhydride—anthracene complex unit. The activation energy of thermal promotions is ≈ 2500 cm -1.

  3. UV Light Induced Direct Synthesis of Phenanthrene Derivatives from a Linear 3-Aryl-N-(arylsulfonyl) Propiolamides.

    PubMed

    Chen, Ming; Yang, Chao; Wang, Yanpei; Li, Dazhi; Xia, Wujiong

    2016-05-01

    A novel photochemical approach for the synthesis of phenanthrene derivatives from linear 3-aryl-N-(arylsulfonyl) propiolamides via a tandem radical Smiles rearrangement/C-S bonding/Mallory reaction is disclosed. The control experiment results and isolation of the key intermediates give further insight into the reaction mechanism. Gram scale reaction using a flow reactor demonstrated the synthetic potential applications of our protocol. PMID:27115834

  4. [Influence of Three Low-Molecular-Weight Organic Acids on the Adsorption of Phenanthrene in Purple Soil].

    PubMed

    Xie, Li; Chen, Ben-shou; Zhang, Jin-zhong; Lu, Song; Jiang, Tao

    2016-03-15

    The effects of three low-molecular-weight organic acids (citric acid, malic acid and oxalic acid) on the adsorption of phenanthrene in purple soil were studied by static adsorption experiment. The results showed that the adsorption kinetic process of phenanthrene in purple soil could be described by the second-order kinetic model, and the adsorption rate constant would significantly decrease in the presence of the three low-molecular-weight organic acids ( LMWOAs). The adsorption thermodynamic process could be well described by linear adsorption model, which was dominated by distribution role. The three LMWOAs could promote the adsorption of phenantherene in purple soil when their concentrations were less than 5 mmol · L⁻¹, whereas inhibit the adsorption when their concentrations were more than 10 mmol · L⁻¹, and the inhibition would increase with increasing concentrations. Moreover, the inhibitory ability displayed a decreasing order of citric acid, oxalic acid, and malic acid when their concentrations were 20 mmol · L⁻¹, which is related to the molecular structure and acidity of the three LMWOAs. Compared with the control, the content of dissolved organic matter (DOM) released from purple soil showed a trend of first decrease and then increase with increasing LMWOAs concentration, and the adsorption capacity of phenanthrene in purple soil was negatively related to DOM content. PMID:27337897

  5. A laboratory feasibility study on a new electrokinetic nutrient injection pattern and bioremediation of phenanthrene in a clayey soil.

    PubMed

    Xu, Wei; Wang, Cuiping; Liu, Haibin; Zhang, Zhiyuan; Sun, Hongwen

    2010-12-15

    Electrokinetic (EK) injection has recently been proposed to supply nutrients and electron acceptors in bioremediation of low permeable soils. However, effective pH control and uniform injection of inorganic ions have yet to be developed. The present study investigated a new EK injection pattern, which combined electrolyte circulation and electrode polarity reversal on a clayey soil. Soil pH could be controlled ranging from 7.0 to 7.6 by circulating the mixed electrolyte at a suitable rate (800 mL/h in this study) without any buffer. Ammonium and nitrate ions were distributed more uniformly in soil by electrode polarity reversal. The developed electrokinetic injection technology was applied primarily in bioremediation of phenanthrene contaminated soil. Over 80% of the initial 200mg/kg phenanthrene in soil could be removed in 20 d, and greater phenanthrene removal was achieved using electrode polarity reversal. Hence, the present study provides a promising electrokinetic injection technology for bioremediation of contaminated soils. PMID:20870357

  6. Role of sol with iron oxyhydroxide/sodium dodecyl sulfate composites on Fenton oxidation of sorbed phenanthrene in sand.

    PubMed

    Park, Joo-Yang; Kim, Jung-Hwan

    2013-09-15

    In situ Fenton oxidation has been recently used to oxidize sorbed organic contaminants in soil. The objective of present contribution was to study the role of sodium dodecyl sulfate (SDS) as anionic surfactant and sol with iron oxyhydroxide/SDS for Fenton oxidation of sorbed phenanthrene in sand. The most effective experimental condition for phenanthrene oxidation was the Fenton-like reaction system with 0.35% H2O2, 30 mM SDS, and 4 mM FeCl2. The Fenton-like reactions under these experimental conditions resulted in the production and sustenance of a stable sol with iron oxyhydroxide/SDS composites over 24 h. The formation of iron oxyhydroxide/SDS composites resulted in stabilization of H2O2, and then the Fenton-like reactions were sustained over 24 h. Furthermore, the sol of iron oxyhydroxide/SDS composites gave suitable sites to sustain oxidations of dissolved phenanthrene over a prolonged reaction span, which is required for in situ chemical oxidation. PMID:23666072

  7. Dynamics of Bacterial Communities in Two Unpolluted Soils after Spiking with Phenanthrene: Soil Type Specific and Common Responders

    PubMed Central

    Ding, Guo-Chun; Heuer, Holger; Smalla, Kornelia

    2012-01-01

    Considering their key role for ecosystem processes, it is important to understand the response of microbial communities in unpolluted soils to pollution with polycyclic aromatic hydrocarbons (PAH). Phenanthrene, a model compound for PAH, was spiked to a Cambisol and a Luvisol soil. Total community DNA from phenanthrene-spiked and control soils collected on days 0, 21, and 63 were analyzed based on PCR-amplified 16S rRNA gene fragments. Denaturing gradient gel electrophoresis (DGGE) fingerprints of bacterial communities increasingly deviated with time between spiked and control soils. In taxon specific DGGE, significant responses of Alphaproteobacteria and Actinobacteria became only detectable after 63 days, while significant effects on Betaproteobacteria were detectable in both soils after 21 days. Comparison of the taxonomic distribution of bacteria in spiked and control soils on day 63 as revealed by pyrosequencing indicated soil type specific negative effects of phenanthrene on several taxa, many of them belonging to the Gamma-, Beta-, or Deltaproteobacteria. Bacterial richness and evenness decreased in spiked soils. Despite the significant differences in the bacterial community structure between both soils on day 0, similar genera increased in relative abundance after PAH spiking, especially Sphingomonas and Polaromonas. However, this did not result in an increased overall similarity of the bacterial communities in both soils. PMID:22934091

  8. Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4

    DOE PAGESBeta

    Shetty, Ameesha R.; de Gannes, Vidya; Obi, Chioma C.; Lucas, Susan; Lapidus, Alla; Cheng, Jan-Fang; Goodwin, Lynne A.; Pitluck, Samuel; Peters, Linda; Mikhailova, Natalia; et al

    2015-08-15

    Polycyclic aromatic hydrocarbons (PAH) are ubiquitous environmental pollutants and microbial biodegradation is an important means of remediation of PAH-contaminated soil. Delftia acidovorans Cs1-4 (formerly Delftia sp. Cs1-4) was isolated by using phenanthrene as the sole carbon source from PAH contaminated soil in Wisconsin. Its full genome sequence was determined to gain insights into a mechanisms underlying biodegradation of PAH. Three genomic libraries were constructed and sequenced: an Illumina GAii shotgun library (916,416,493 reads), a 454 Titanium standard library (770,171 reads) and one paired-end 454 library (average insert size of 8 kb, 508,092 reads). The initial assembly contained 40 contigs inmore » two scaffolds. The 454 Titanium standard data and the 454 paired end data were assembled together and the consensus sequences were computationally shredded into 2 kb overlapping shreds. Illumina sequencing data was assembled, and the consensus sequence was computationally shredded into 1.5 kb overlapping shreds. Gaps between contigs were closed by editing in Consed, by PCR and by Bubble PCR primer walks. A total of 182 additional reactions were needed to close gaps and to raise the quality of the finished sequence. The final assembly is based on 253.3 Mb of 454 draft data (averaging 38.4 X coverage) and 590.2 Mb of Illumina draft data (averaging 89.4 X coverage). The genome of strain Cs1-4 consists of a single circular chromosome of 6,685,842 bp (66.7 %G+C) containing 6,028 predicted genes; 5,931 of these genes were protein-encoding and 4,425 gene products were assigned to a putative function. Genes encoding phenanthrene degradation were localized to a 232 kb genomic island (termed the phn island), which contained near its 3’ end a bacteriophage P4-like integrase, an enzyme often associated with chromosomal integration of mobile genetic elements. Other biodegradation pathways reconstructed from the genome sequence included: benzoate (by the acetyl

  9. Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4

    SciTech Connect

    Shetty, Ameesha R.; de Gannes, Vidya; Obi, Chioma C.; Lucas, Susan; Lapidus, Alla; Cheng, Jan-Fang; Goodwin, Lynne A.; Pitluck, Samuel; Peters, Linda; Mikhailova, Natalia; Teshima, Hazuki; Han, Cliff; Tapia, Roxanne; Land, Miriam; Hauser, Loren J.; Kyrpides, Nikos; Ivanova, Natalia; Pagani, Ioanna; Chain, Patrick S. G.; Denef, Vincent J.; Woyke, Tanya; Hickey, William J.

    2015-08-15

    Polycyclic aromatic hydrocarbons (PAH) are ubiquitous environmental pollutants and microbial biodegradation is an important means of remediation of PAH-contaminated soil. Delftia acidovorans Cs1-4 (formerly Delftia sp. Cs1-4) was isolated by using phenanthrene as the sole carbon source from PAH contaminated soil in Wisconsin. Its full genome sequence was determined to gain insights into a mechanisms underlying biodegradation of PAH. Three genomic libraries were constructed and sequenced: an Illumina GAii shotgun library (916,416,493 reads), a 454 Titanium standard library (770,171 reads) and one paired-end 454 library (average insert size of 8 kb, 508,092 reads). The initial assembly contained 40 contigs in two scaffolds. The 454 Titanium standard data and the 454 paired end data were assembled together and the consensus sequences were computationally shredded into 2 kb overlapping shreds. Illumina sequencing data was assembled, and the consensus sequence was computationally shredded into 1.5 kb overlapping shreds. Gaps between contigs were closed by editing in Consed, by PCR and by Bubble PCR primer walks. A total of 182 additional reactions were needed to close gaps and to raise the quality of the finished sequence. The final assembly is based on 253.3 Mb of 454 draft data (averaging 38.4 X coverage) and 590.2 Mb of Illumina draft data (averaging 89.4 X coverage). The genome of strain Cs1-4 consists of a single circular chromosome of 6,685,842 bp (66.7 %G+C) containing 6,028 predicted genes; 5,931 of these genes were protein-encoding and 4,425 gene products were assigned to a putative function. Genes encoding phenanthrene degradation were localized to a 232 kb genomic island (termed the phn island), which contained near its 3’ end a bacteriophage P4-like integrase, an enzyme often associated with chromosomal integration of mobile genetic elements. Other biodegradation pathways reconstructed from the genome sequence included: benzoate (by the acetyl-CoA pathway

  10. Magnetic adsorbents for the removal of Hg (II) and phenanthrene from aqueous solutions

    NASA Astrophysics Data System (ADS)

    Isari, Ekavi; Karapanagioti, Hrissi K.; Manariotis, Ioannis D.; Werner, David

    2015-04-01

    Activated carbon (AC) acts as a strong binding agent that lowers the pollutant concentration and, thus its toxicity. Another promising sorbent material in environmental applications is biochar (BC) which is obtained from the incomplete combustion of carbon-rich biomass under oxygen-limited conditions. Both of these materials could be used as soil or sediment amendments that would lower the toxicity in the aqueous phase. A draw back of this technique is that although the pollutant will remain non- bioavailable for many years being sorbed into these sorbents, it actually stays into the system. The objective of this study was (a) to synthesize a magnetic powdered activated carbon (AC/Fe) and magnetic powdered biochar (BC/Fe) produced from commercial AC1 and AC2 samples and biochar respectively and (b) to evaluate the potential use of AC/Fe and BIO/Fe to remove aqueous Hg (II) or phenanthrene while being magnetically recoverable. The BC was produced from olive pomace. The surface area, the pore volume, and the average pore size of each sorbent were determined using gas (N2) adsorption-desorption cycles and the Brunauer, Emmett, and Teller (BET) equation. Isotherms with 30 adsorption and 20 desorption points were conducted at liquid nitrogen temperature (77K). Open surface area and micropore volume were determined using t-plot method and Harkins & Jura equation. For both AC/Fe, surface area measurements resulted in 66% those of corresponding AC. For BC/Fe, the surface area was 82% that of BC. Batch experiments with all sorbent samples and mercury solutions were conducted at room temperature (25oC) and at pH 5 in order to compare the sorption properties of the materials. Similar tests were performed with phenanthrene solutions. Based on mercury isotherm data, AC/Fe and BC/Fe are effective sorbents but with lower sorption capacity compared to the initial materials (50-75% lower). All these properties point to promising materials that can effectively be used for in

  11. Complete genome sequence of the phenanthrene-degrading soil bacterium Delftia acidovorans Cs1-4.

    PubMed

    Shetty, Ameesha R; de Gannes, Vidya; Obi, Chioma C; Lucas, Susan; Lapidus, Alla; Cheng, Jan-Fang; Goodwin, Lynne A; Pitluck, Samuel; Peters, Linda; Mikhailova, Natalia; Teshima, Hazuki; Han, Cliff; Tapia, Roxanne; Land, Miriam; Hauser, Loren J; Kyrpides, Nikos; Ivanova, Natalia; Pagani, Ioanna; Chain, Patrick S G; Denef, Vincent J; Woyke, Tanya; Hickey, William J

    2015-01-01

    Polycyclic aromatic hydrocarbons (PAH) are ubiquitous environmental pollutants and microbial biodegradation is an important means of remediation of PAH-contaminated soil. Delftia acidovorans Cs1-4 (formerly Delftia sp. Cs1-4) was isolated by using phenanthrene as the sole carbon source from PAH contaminated soil in Wisconsin. Its full genome sequence was determined to gain insights into a mechanisms underlying biodegradation of PAH. Three genomic libraries were constructed and sequenced: an Illumina GAii shotgun library (916,416,493 reads), a 454 Titanium standard library (770,171 reads) and one paired-end 454 library (average insert size of 8 kb, 508,092 reads). The initial assembly contained 40 contigs in two scaffolds. The 454 Titanium standard data and the 454 paired end data were assembled together and the consensus sequences were computationally shredded into 2 kb overlapping shreds. Illumina sequencing data was assembled, and the consensus sequence was computationally shredded into 1.5 kb overlapping shreds. Gaps between contigs were closed by editing in Consed, by PCR and by Bubble PCR primer walks. A total of 182 additional reactions were needed to close gaps and to raise the quality of the finished sequence. The final assembly is based on 253.3 Mb of 454 draft data (averaging 38.4 X coverage) and 590.2 Mb of Illumina draft data (averaging 89.4 X coverage). The genome of strain Cs1-4 consists of a single circular chromosome of 6,685,842 bp (66.7 %G+C) containing 6,028 predicted genes; 5,931 of these genes were protein-encoding and 4,425 gene products were assigned to a putative function. Genes encoding phenanthrene degradation were localized to a 232 kb genomic island (termed the phn island), which contained near its 3' end a bacteriophage P4-like integrase, an enzyme often associated with chromosomal integration of mobile genetic elements. Other biodegradation pathways reconstructed from the genome sequence included: benzoate (by the acetyl-CoA pathway

  12. Root-Shoot Signaling crosstalk involved in the shoot growth promoting action of rhizospheric humic acids

    PubMed Central

    Olaetxea, Maite; Mora, Verónica; García, Andrés Calderin; Santos, Leandro Azevedo; Baigorri, Roberto; Fuentes, Marta; Garnica, María; Berbara, Ricardo Luis Louro; Zamarreño, Angel Maria; Garcia-Mina, Jose M.

    2016-01-01

    ABSTRACT Numerous studies have shown the ability of humic substances to improve plant development. This action is normally reflected in an enhancement of crop yields and quality. However, the mechanisms responsible for this action of humic substances remain rather unknown. Our studies have shown that the shoot promoting action of sedimentary humic acids is dependent of its ability to increase root hydraulic conductivity through signaling pathways related to ABA, which in turn is affected in roots by humic acids in an IAA-NO dependent way. Furthermore, these studies also indicate that the primary action of humic acids in roots might also be physical, resulting from a transient mild stress caused by humic acids associated with a fouling-cleaning cycle of wall cell pores. Finally the role of alternative signal molecules, such as ROS, and corresponding signaling pathways are also discussed and modeled in the context of the above-mentioned framework. PMID:26966789

  13. Molecular characteristics of humic acids isolated from vermicomposts and their relationship to bioactivity.

    PubMed

    Martinez-Balmori, Dariellys; Spaccini, Riccardo; Aguiar, Natália Oliveira; Novotny, Etelvino Henrique; Olivares, Fábio Lopes; Canellas, Luciano Pasqualoto

    2014-11-26

    Vermitechnology is an effective composting method, which transforms biomass into nutrient-rich organic fertilizer. Mature vermicompost is a renewable organic product containing humic substances with high biological activity. The aim of this study was to assess the chemical characteristics and the bioactivity of humic acids isolated from different vermicomposts produced with either cattle manure, sugar cane bagasse, sunflower cake from seed oil extraction, or filter cake from a sugar cane factory. More than 200 different molecules were found, and it was possible to identify chemical markers on humic acids according to the nature of the organic source. The large hydrophobic character of humic extracts and the preservation of altered lignin derivatives confer to humic acids the ability to induce lateral root emergence in maize seedlings. Humic acid-like substances extracted from plant biomass residues represent an additional valuable product of vermicomposting that can be used as a plant growth promoter. PMID:25379603

  14. The effect of humic acids on the element release from high level waste glass

    SciTech Connect

    Wei, J.; Van Iseghem, P.

    1997-12-31

    Eu and Am doped glasses were interacted with synthetic interstitial clay water (SiC) and corresponding reference leachant, humic acids free interstitial solution (IS) to investigate the influence of humic acids on the leaching behavior of the waste glass. Static leach tests were carried out at 40 C and 90 C. The release of the lanthanide Eu and the actinide Am from the glass was obviously enhanced by the presence of humic acids. The leaching of transition elements, Fe and Ti strongly depends on the humic acids concentration. The leaching of glass matrix components, Al and B was also influenced by the concentrations of humic acids. However, humic acids have little effect on the leaching of glass matrix element Si.

  15. Origin of sedimentary humic acids, potential carriers of ore-forming elements

    NASA Astrophysics Data System (ADS)

    Hatcher, P. G.

    Humic acids are complex, macromolecular organic components of sediments and are defined by their solubility in dilute alkali insolubility in dilute acid. Because of their general structural characteristics (for example, their high proportion of oxygen functional groups), humic acids can complex with inorganic cations and may be important in forming ore deposits. In some instances (such as uranium ores), ore bodies are believed to have originated by mobilization of an ore-forming element complexed with humic acids and subsequent precipitation. Knowledge of the mechanism for the formation of humic acids is being applied to two major ore deposits. Carlin-type gold ores from Nevada show that humic acids may have been precursors. This suggests that the humic acids could have played a major role in the transport and accumulation of the ore.

  16. A simple method for quantifying the humic content of commercial products.

    PubMed

    Quentel, François; Filella, Montserrat

    2011-12-01

    A method based on an analytical technique, initially developed for quantifying aquatic refractory organic matter (often called humics), has been applied to commercial samples claiming to contain humic-type substances. At present, no method exists for quantifying the humic content on this type of sample. The analytical method is based on measuring the peak current obtained by adsorptive stripping voltammetry of the complex formed by refractory organic matter in the presence of trace amounts of Mo(VI). The quantification procedure requires the response obtained for the unknown sample to be compared with the response obtained with International Humic Substance Society (IHSS) reference humic substances. A very simple procedure that enables the humic content of any sample to be expressed as IHSS standard equivalents is described in detail. The method is highly selective, reproducible and suitable for routine analysis. PMID:21935595

  17. Characterization of pH-fractionated humic acids with respect to their dissociation behaviour.

    PubMed

    Klučáková, Martina

    2016-04-01

    Humic acids were divided into several fractions using buffer solutions as extraction agents with different pH values. Two methods of fractionation were used. The first one was subsequent dissolution of bulk humic acids in buffers adjusted to different pH. The second one was sequential dissolution in buffers with increasing pH values. Experimental data were compared with hypothesis of partial solubility of humic acids in aqueous solutions. Behaviour of humic fractions obtained by sequential dissolution, original bulk sample and residual fractions obtained by subsequent dissolution at pH 10 and 12 agrees with the hypothesis. Results demonstrated that regardless the common mechanism, solubility and dissociation degree of various humic fractions may be very different and can be estimated using parameters of the model based on the proposed mechanism. Presented results suggest that dissolving of solid humic acids in water environment is more complex than conventional solubility behaviour of sparingly soluble solids. PMID:26746402

  18. Reduced humic acid nanosheets and its uses as nanofiller

    NASA Astrophysics Data System (ADS)

    Duraia, El-shazly M.; Henderson, B.; Beall, Gary W.

    2015-10-01

    Leonardite is highly oxidized form of lignite coal and contains a number of carboxyl groups around the edges of a graphene-like core. A novel approach has been developed to synthesize graphene oxide-like nanosheets in large scale utilizing leonardite as a starting material. Humic acid extracted from leonardite has been reduced by performing a high pressure catalytic hydrogenation. The reaction was carried out inside a high pressure stirred reactor at 150 °C and 750 psi (~5.2×106 Pa). Morphology of the as-synthesized samples showed porous platy particles and EDAX analysis indicates the carbon and oxygen atomic ratios as 96:4-97:3%. The as-synthesized material has been used as nanofiller in polyurethane. The reduced humic acid-polyurethane nanocomposite showed over 250% increase of Young's modulus. This new approach provides a low cost and scalable source for graphene oxide-like nanosheets in nanocomposite applications.

  19. Characterisation of humic acid by means of SERS

    NASA Astrophysics Data System (ADS)

    Vogel, E.; Geßner, R.; Hayes, M. H. B.; Kiefer, W.

    1999-05-01

    Humic acid from Oak Forest extracted at pH 7, was investigated by means of surface enhanced Raman spectroscopy (SERS). The substance was deposited on two different SERS substrates: ex-situ roughened silver electrodes and silver island films. A comparison of the SERS spectra excited with the 514 nm and the 647 nm lines shows considerable differences in the relative intensities of the bands. These alterations may be a result of resonance enhancement and/or photochemically induced conformation changes of the molecule. Differences in the SERS spectra of the sample adsorbed on different SERS substrates indicate a strong dependence of the adsorption configuration of the humic acid on the metal surface, on the surface potential, and on the coadsorption of anions.

  20. In vivo cytogenetic effects of natural humic acid.

    PubMed

    Bernacchi, F; Ponzanelli, I; Minunni, M; Falezza, A; Loprieno, N; Barale, R

    1996-09-01

    As humic compounds are naturally widespread in the environment and present in surface water, studies on their genotoxicity are justified. Humic acid (HA) has not been demonstrated to be genotoxic either in vitro or in vivo. In the present paper we investigated its activity both in intestinal and bone marrow cells following a single dose (100 mg/kg b.w. corresponding to 0.5 ml per animal of an aqueous solution of 4 g/l) of HA administered to mice by gastric intubation, to mimic the most likely route of human exposure. HA induced structural and, in particular, numerical chromosome abnormalities in intestinal cells. A marginal, non-significant induction of aneuploidy was also found in bone marrow cells. PMID:8921508

  1. Removal of humic substances from water by brown coal sorbents

    SciTech Connect

    E.V. Veprikova; A.V. Rudkovskii; M.L. Shchipko

    2007-12-15

    Brown coal sorption materials with high activity toward humic substances were prepared using a larger scale laboratory unit with a spouted-bed system. The effect of thermal treatment conditions on the sorption properties of these materials was studied. It was found that the sorption activity of the resulting samples toward humates was closely related to the limiting sorption volume of the materials with respect to benzene.

  2. Investigation of humic acid samples from different sources by photon correlation spectroscopy

    NASA Astrophysics Data System (ADS)

    Caceci, Marco S.; Moulin, Valerie

    Photon correlation spectroscopy (dynamic light scattering) indicated that relatively large scatterers (50-200 nm diameter) are present in a number of soil, lake and groundwater humic and fulvic acids, as well as in natural waters of high humic content, but absent in synthetic humic acid. The influence of ionic strength, Ca(II), La(III), EDTA, fluoride ions, surfactants, and ultrasound on size and zeta potential of these scatterers has also been investigated.

  3. Mutagenic by-products from chlorination of humic acid

    SciTech Connect

    Meier, J.R.; Ringhand, H.P.; Coleman, W.E.; Schenck, K.M.; Munch, J.W.; Streicher, R.P.; Kaylor, W.H.; Kopfler, F.C.

    1986-11-01

    Chlorination of humic and fulvic acid results in the formation of direct-acting mutagenicity, detectable in the Salmonella/microsome assay (Ames test). This mutagenicity is being characterized as part of an overall effort aimed at evaluating potential health risks associated with the presence of mutagenic chemicals in drinking water. A number of chlorinated organic compounds, including several known mutagens, have been identified and quantified in diethyl either extracts of chlorinated humic acid solutions. However, the total mutagenicity of these compounds accounts for only about 7% of the original mutagenicity. Synergistic or antagonistic interactions among the identified components have been ruled out as possible explanations for the failure to account for a higher percentage of the activity. Recent progress has been made to separate the activity into neutral and strong acid fractions. Further isolation of the strong acids by high-pressure liquid chromatography (HPLC) has resulted in the purification of the mutagenicity into a major peak of activity with a specific mutagenicity of about 20,000 TA100 revertants per milligram. Several trichlorohydroxyfuranone isomers have been tentatively identified in this fraction. The contribution of these types of compounds to the mutagenicity of chlorinated humic acid is under investigation.

  4. Interactions of Tc(IV) with humic substances.

    PubMed

    Boggs, Mark A; Minton, Travis; Dong, Wenming; Lomasney, Samuel; Islam, Mohammed R; Gu, Baohua; Wall, Nathalie A

    2011-04-01

    To understand the key processes affecting 99Tc mobility in the subsurface and help with the remediation of contaminated sites, the binding constants of several humic substances (humic and fulvic acids) with Tc(IV) were determined, using a solvent extraction technique. The novelty of this paper lies in the determination of the binding constants of the complexes formed with the individual species TcO(OH)+ and TcO(OH)2(0). Binding constants were found to be 6.8 and between 3.9 and 4.3, for logβ1,-1,1 and logβ1,-2,1, respectively; these values were little modified by a change of ionic strength, in most cases, between 0.1 and 1.0 M, nor were they by the nature and origin of the humic substances. Modeling calculations based on these show TcO(OH)-HA to be the predominant complex in a system containing 20 ppm HA and in the 4-6 pH range, whereas TcO(OH)2(0) and TcO(OH)2-HA are the major species, in the pH 6-8 range. PMID:21366306

  5. Formation of humic substances in weathered MSWI bottom ash.

    PubMed

    Zhang, Haixia; Shimaoka, Takayuki

    2013-01-01

    The study aimed at evaluating the humic substances (HSs) content from municipal solid waste incinerator (MSWI) bottom ash and its variation with time and the effect of temperature on HSs formation. The process suggested by IHSS was applied to extract HSs from two different bottom ash samples, and the extracted efficiency with NaOH and Na4P2O7 was compared. MSWI bottom ash samples were incubated at 37°C and 50°C for 1 year. HSs and nonhumic substances were extracted from the bottom ash sample with different incubated period by 0.1 M NaOH/Na₄P₂O₇. Results show that the rate of humic acid formation increased originally with incubation time, reached a maximum at 12th week under 37°C and at 18th week under 50°C, and then decreased with time. More humic acid in MSWI bottom ash was formed under 50°C incubated condition compared with that incubated under 37°C. Also, the elemental compositions of HSs extracted from bottom ash are reported. PMID:23844394

  6. Nitrogen incorporation into lignite humic acids during microbial degradation

    SciTech Connect

    Dong, L.H.; Yuan, H.L.

    2009-07-01

    Previous study showed that nitrogen content in lignite humic acids (HA) increased significantly during lignite biodegradation. In this paper we evaluated the factors responsible for the increased level of N in HA and the formation of new nitrogen compound following microbial degradation. When the ammonium sulfate concentration in lignite medium was 0.5%, the N-content in HA was higher than that in the crude lignite humic acid (cHA); when the ammonium sulfate concentration was epsilon 0.5%, both the biodegraded humic acid (bHA) N-content and the content of bHA in lignite increased significantly, but at 2.0% no increase was observed. This indicated that HA incorporated N existing in the lignite medium, and more HA can incorporate more N with the increase of bHA amount in lignite during microbial degradation. CP/MAS {sup 15}N NMR analysis showed that the N incorporated into HA during biotransformation was in the form of free or ionized NH{sub 2}-groups in amino acids and sugars, as well as NH{sub 4}{sup +}. We propose nitrogen can be incorporated into HA biotically and abiotically. The high N content bHA has a potential application in agriculture since N is essential for plant growth.

  7. Reductive dechlorination of trichloroethene mediated by humic-metal complexes

    SciTech Connect

    O`Loughlin, E.J.; Burris, D.R.; Delcomyn, C.A.

    1999-04-01

    Experiments were conducted to determine if transition metal-humic acid complexes can act as e{sup {minus}} transfer mediators in the reductive dechlorination of trichloroethene (TCE) using Ti(III) citrate as the bulk reductant. In the presence of Ni-Aldrich humic acid (AHA) complexes, TCE reduction was rapid, with complete removal of TCE in less than 23 h. Cu-AHA complexes were less effective as e{sup {minus}} mediators than Ni-AHA complexes; only 60% of TCE was reduced after 150 h. Partially dechlorinated intermediates were observed during TCE reduction; however, they were transitory, and at no time accounted for more than 2% of the initial TCE mass on a mole C basis. Ethane and ethene were the primary end products of TCE reduction; however, a suite of other non-chlorinated hydrocarbons consisting of methane and C{sub 3} to C{sub 6} alkanes and alkenes were also observed. The results suggest that humic-metal complexes may represent a previously unrecognized class of electron mediators in natural environments.

  8. Covalent binding of aniline to humic substances. 1. Kinetic studies

    USGS Publications Warehouse

    Weber, E.J.; Spidle, D.L.; Thorn, K.A.

    1996-01-01

    The reaction kinetics for the covalent binding of aniline with reconstituted IHSS humic and fulvic acids, unfractionated DOM isolated from Suwannee River water, and whole samples of Suwannee River water have been investigated. The reaction kinetics in each of these systems can be adequately described by a simple second-order rate expression. The effect of varying the initial concentration of aniline on reaction kinetics suggested that approximately 10% of the covalent binding sites associated with Suwannee River fulvic acid are highly reactive sites that are quickly saturated. Based on the kinetic parameters determined for the binding of aniline with the Suwannee River fulvic and humic acid isolates, it was estimated that 50% of the aniline concentration decrease in a Suwannee River water sample could be attributed to reaction with the fulvic and humic acid components of the whole water sample. Studies with Suwannee River fulvic acid demonstrated that the rate of binding decreased with decreasing pH, which parallels the decrease in the effective concentration of the neutral form, or reactive nucleophilic species of aniline. The covalent binding of aniline with Suwannee River fulvic acid was inhibited by prior treatment of the fulvic acid with hydrogen sulfide, sodium borohydride, or hydroxylamine. These observations are consistent with a reaction pathway involving nucleophilic addition of aniline to carbonyl moieties present in the fulvic acid.

  9. Formation of Humic Substances in Weathered MSWI Bottom Ash

    PubMed Central

    Zhang, Haixia; Shimaoka, Takayuki

    2013-01-01

    The study aimed at evaluating the humic substances (HSs) content from municipal solid waste incinerator (MSWI) bottom ash and its variation with time and the effect of temperature on HSs formation. The process suggested by IHSS was applied to extract HSs from two different bottom ash samples, and the extracted efficiency with NaOH and Na4P2O7 was compared. MSWI bottom ash samples were incubated at 37°C and 50°C for 1 year. HSs and nonhumic substances were extracted from the bottom ash sample with different incubated period by 0.1 M NaOH/Na4P2O7. Results show that the rate of humic acid formation increased originally with incubation time, reached a maximum at 12th week under 37°C and at 18th week under 50°C, and then decreased with time. More humic acid in MSWI bottom ash was formed under 50°C incubated condition compared with that incubated under 37°C. Also, the elemental compositions of HSs extracted from bottom ash are reported. PMID:23844394

  10. Interactions of Tc(IV) with humic substances

    SciTech Connect

    Boggs, M. A.; Minton, Travis; Lomasney, Samuel; Islam, Mohammed; Dong, Wenming; Gu, Baohua; Wall, Nathalie

    2011-01-01

    To understand the key processes affecting 99Tc mobility in the subsurface and help with the remediation of contaminated sites, the binding constants of several humic substances (humic and fulvic acids) with Tc(IV) were determined, using a solvent extraction technique. The novelty of this paper lies in the determination of the binding constants of the complexes formed with the individual species TcO(OH)+ and TcO(OH)20. Binding constants were found to be 6.8 and between 3.9 and 4.3, for log 1, 1,1 and log 1,-2,1, respectively; these values were little modified by a change of ionic strength, in most cases, between 0.1 M to 1.0 M, nor were they by the nature and origin of the humic substances. Modeling calculations based on these show TcO(OH)-HA to be the predominant complex in a system containing 20 ppm HA and in the 4-6 pH range, while TcO(OH)20 and TcO(OH)2-HA are the major species, in the pH 6-8 range.

  11. Soil Mineral Composition Matters: Response of Microbial Communities to Phenanthrene and Plant Litter Addition in Long-Term Matured Artificial Soils

    PubMed Central

    Babin, Doreen; Vogel, Cordula; Zühlke, Sebastian; Schloter, Michael; Pronk, Geertje Johanna; Heister, Katja; Spiteller, Michael; Kögel-Knabner, Ingrid; Smalla, Kornelia

    2014-01-01

    The fate of polycyclic aromatic hydrocarbons (PAHs) in soil is determined by a suite of biotic and abiotic factors, and disentangling their role in the complex soil interaction network remains challenging. Here, we investigate the influence of soil composition on the microbial community structure and its response to the spiked model PAH compound phenanthrene and plant litter. We used long-term matured artificial soils differing in type of clay mineral (illite, montmorillonite) and presence of charcoal or ferrihydrite. The soils received an identical soil microbial fraction and were incubated for more than two years with two sterile manure additions. The matured artificial soils and a natural soil were subjected to the following spiking treatments: (I) phenanthrene, (II) litter, (III) litter + phenanthrene, (IV) unspiked control. Total community DNA was extracted from soil sampled on the day of spiking, 7, 21, and 63 days after spiking. Bacterial 16S rRNA gene and fungal internal transcribed spacer amplicons were quantified by qPCR and subjected to denaturing gradient gel electrophoresis (DGGE). DGGE analysis revealed that the bacterial community composition, which was strongly shaped by clay minerals after more than two years of incubation, changed in response to spiked phenanthrene and added litter. DGGE and qPCR showed that soil composition significantly influenced the microbial response to spiking. While fungal communities responded only in presence of litter to phenanthrene spiking, the response of the bacterial communities to phenanthrene was less pronounced when litter was present. Interestingly, microbial communities in all artificial soils were more strongly affected by spiking than in the natural soil, which might indicate the importance of higher microbial diversity to compensate perturbations. This study showed the influence of soil composition on the microbiota and their response to phenanthrene and litter, which may increase our understanding of

  12. Soil mineral composition matters: response of microbial communities to phenanthrene and plant litter addition in long-term matured artificial soils.

    PubMed

    Babin, Doreen; Vogel, Cordula; Zühlke, Sebastian; Schloter, Michael; Pronk, Geertje Johanna; Heister, Katja; Spiteller, Michael; Kögel-Knabner, Ingrid; Smalla, Kornelia

    2014-01-01

    The fate of polycyclic aromatic hydrocarbons (PAHs) in soil is determined by a suite of biotic and abiotic factors, and disentangling their role in the complex soil interaction network remains challenging. Here, we investigate the influence of soil composition on the microbial community structure and its response to the spiked model PAH compound phenanthrene and plant litter. We used long-term matured artificial soils differing in type of clay mineral (illite, montmorillonite) and presence of charcoal or ferrihydrite. The soils received an identical soil microbial fraction and were incubated for more than two years with two sterile manure additions. The matured artificial soils and a natural soil were subjected to the following spiking treatments: (I) phenanthrene, (II) litter, (III) litter + phenanthrene, (IV) unspiked control. Total community DNA was extracted from soil sampled on the day of spiking, 7, 21, and 63 days after spiking. Bacterial 16S rRNA gene and fungal internal transcribed spacer amplicons were quantified by qPCR and subjected to denaturing gradient gel electrophoresis (DGGE). DGGE analysis revealed that the bacterial community composition, which was strongly shaped by clay minerals after more than two years of incubation, changed in response to spiked phenanthrene and added litter. DGGE and qPCR showed that soil composition significantly influenced the microbial response to spiking. While fungal communities responded only in presence of litter to phenanthrene spiking, the response of the bacterial communities to phenanthrene was less pronounced when litter was present. Interestingly, microbial communities in all artificial soils were more strongly affected by spiking than in the natural soil, which might indicate the importance of higher microbial diversity to compensate perturbations. This study showed the influence of soil composition on the microbiota and their response to phenanthrene and litter, which may increase our understanding of

  13. Electrochemical Interrogation of G3-Poly(propylene thiophenoimine) Dendritic Star Polymer in Phenanthrene Sensing

    PubMed Central

    Makelane, Hlamulo R.; Tovide, Oluwakemi; Sunday, Christopher E.; Waryo, Tesfaye; Iwuoha, Emmanuel I.

    2015-01-01

    A novel dendritic star-copolymer, generation 3 poly(propylene thiophenoimine) (G3PPT)-co-poly(3-hexylthiophene) (P3HT) star co-polymer on gold electrode (i.e., Au|G3PPT-co-P3HT) was used as a sensor system for the determination of phenanthrene (PHE). The G3PPT-co-P3HT star co-polymer was synthesized via in situ electrochemical co-polymerization of generation 3 poly (propylene thiophenoimine) and poly (3-hexylthiophene) on gold electrode. 1HNMR spectroscopy was used to determine the regioregularity of the polymer composites, whereas Fourier transform infrared spectroscopy and scanning electron microscopy were used to study their structural and morphological properties. Au|G3PPT-co-P3HT in the absence of PHE, exhibited reversible electrochemistry attributable to the oligo (thiophene) ‘pendants’ of the dendrimer. PHE produced an increase in the voltammetric signals (anodic currents) due to its oxidation on the dendritic material to produce catalytic current, thereby suggesting the suitability of the Au|G3PPT-co-P3HT electrode as a PHE sensor. The electrocatalysis of PHE was made possible by the rigid and planar oligo-P3HT species (formed upon the oxidation of the oligo (thiophene) pendants of the star-copolymer), which allowed the efficient capture (binding) and detection (electrocatalytic oxidation) of PHE molecules. PMID:26404296

  14. Impact of deashing treatment on biochar structural properties and potential sorption mechanisms of phenanthrene.

    PubMed

    Sun, Ke; Kang, Mingjie; Zhang, Zheyun; Jin, Jie; Wang, Ziying; Pan, Zezhen; Xu, Dongyu; Wu, Fengchang; Xing, Baoshan

    2013-10-15

    Knowledge of the mineral effects of biochars on their sorption of hydrophobic organic contaminants (HOCs) is limited. Sorption of phenanthrene (PHE) by plant-residue derived biochars (PLABs) and animal waste-derived biochars (ANIBs) obtained at two heating treatment temperatures (HTTs) (450 and 600 °C) and their corresponding deashed biochars was investigated. The decreased surface polarity and increased bulk polarity of biochars after deashing treatment indicated that abundant minerals of biochars benefit external exposure of polar groups associated organic matter (OM). Organic carbon (OC)-normalized distribution coefficients (K(oc)) of PHE by biochars generally increased after deashing, likely due to enhancement of favorable and hydrophobic sorption sites caused by mineral removal. Positive correlation between PHE log K(oc) by PLABs and bulk polarity combined with negative correlation between PHE log K(oc) values by ANIBs and surface polarity suggested PLABs and ANIBs have different sorption mechanisms, probably attributed to their large variation of ash content because minerals influenced OM spatial arrangement within biochars. Results of this work could help us better understand the impact of minerals, bulk/surface polarity, and sorption domain arrangement of biochars on their HOCs sorption and predict the fate of HOCs in soils after biochar application. PMID:24025082

  15. Effects of the Release of Soil Organic Matter on Phenanthrene Sorption by Sediments.

    PubMed

    Zhang, Xiaoyan; Wu, Yaoguo; Hu, Sihai; Li, Tao

    2016-04-01

    The release of soil organic matter (SOM) has been frequently studied, while its effects on sorption kinetics and on the capacity of phenanthrene (PHE) on sediments have seldom been studied. In this study, sodium chloride (NaCl, 0-0.1 mol/L) was introduced to adjust the release of SOM, and three sediments were prepared: a raw sediment (S1), an eluted sediment (S2), and an SOM-removed sediment (S3). The release of SOM , with dissolved organic matter (DOM) formed in solution, was confirmed in sediment 1. Sorption kinetics on sediment 1 showed atypical results as three stages: rapid sorption, pseudo sorption with partial desorption, and slow sorption. Also, a defined "sorption valley" occurred in the kinetic curve, which can be qualitatively determined by the characteristics of the release of SOM, including its amount, rate and sequence in each SOM fraction. Sorption capacity on sediments 1 and 2 was negatively correlated with aqueous DOM concentrations. By changing sediment characteristics and solution properties, the release of SOM significantly impacts polycyclic aromatic hydrocarbons (PAHs) sorption behaviors. These results help clarify the transport of PAHs in sediment-water systems. PMID:27131058

  16. Effect of activated carbon on microbial bioavailability of phenanthrene in soils

    SciTech Connect

    Yang, Y.; Hunter, W.; Tao, S.; Crowley, D.; Gan, J.

    2009-11-15

    Bioavailability is a governing factor that controls the rate of biological degradation of hydrophobic organic contaminants in soil. Among the solid phases that can adsorb hydrophobic organic contaminants in soil, black carbon (BC) exerts a particularly significant effect on phase distribution. However, knowledge on the effect of BC on the microbial availability of polycyclic aromatic hydrocarbons in soil is still limited. In the present study, the effect of a coal-derived activated carbon on the bioavailability of phenanthrene (PHE) during its degradation by Mycobacterium vanbaalenii PYR-1 was measured in three soils. The freely dissolved concentration of PHE was concurrently determined in soil solutions using disposable polydimethylsiloxane fibers. The results showed that PHE mineralization was significantly inhibited after addition of activated carbon in all test soils. After 216 h, only 5.20, 5.83, and 6.85% of PHE was degraded in the 0.5% BC-amended soils initially containing organic carbon at 0.23, 2.1, and 7.1%, respectively. Significant correlation was found between PHE degradability and freely dissolved concentration, suggesting that BC affected PHE bioavailability by decreasing chemical activity. The effect of activated carbon in the amended soils was attributed to its enhancement of soil surface areas and pore volumes. Results from the present study clearly highlighted the importance of BC for influencing the microbial availability of polycyclic aromatic hydrocarbons in soils.

  17. Predicting seasonal fate of phenanthrene in aquatic environment with a Markov chain.

    PubMed

    Sun, Caiyun; Ma, Qiyun; Zhang, Jiquan; Zhou, Mo; Chen, Yanan

    2016-08-01

    Phenanthrene (Phe) with carcinogenicity is ubiquitous in the environment, especially in aquatic environment; its toxicity is greater. To help determine toxicity risk and remediation strategies, this study predicted seasonal fate of Phe in aquatic environment. Candidate mechanisms including biodegradation, sorption, desorption, photodegradation, hydrolysis and volatility were studied; the results for experiments under simulated conditions for normal, wet and dry seasons in the Yinma River Basin indicated that biodegradation in sediment, sorption, desorption, and volatility were important pathways for elimination of Phe from aquatic environment and showed seasonal variations. A microcosm which was used to mimic sediment/water system was set up to illustrate seasonal distribution and transport of Phe. A Markov chain was applied to predict seasonal fate of Phe in air/water/sediment environment, the predicted results were perfectly agreed with results of microcosm experiments. Predicted results with a Markov chain suggested that volatility and biodegradation in sediment were main elimination pathways, and contributions of elimination pathways showed seasonal variations; Phe was eliminated from water and sediment to negligible levels over around 250 h in August and over 1000 h in May; in November, Phe was eliminated from water to a negligible level while about 31 % of Phe amount still remained in sediment over 1000 h. PMID:27180837

  18. Optical properties of phenanthrene: A DFT study for comparison between linear and nonlinear regimes

    NASA Astrophysics Data System (ADS)

    Omidi, A. R.; Dadsetani, M.

    2016-05-01

    The present study tries to determine the optical characteristics as well as the electronic structure of phenanthrene as an important nonlinear organic crystal. We have performed our calculations within the frame work of DFT. Also, we have used bootstrap exchange-correlation kernel (within the framework of TDDFT) to estimate the excitonic effects. According to the results of our study, the investigated crystal has a band structure with low dispersions which is a sign of low intermolecular interactions. In addition to the high values of linear and nonlinear susceptibilities, the crystal in question has a wide range of transparency as well as sufficient anisotropy which make it promising crystal for nonlinear optical applications. Our TDDFT calculations show that the influence of excitonic effects on optical properties can be very dramatic, particularly near the band edge. In addition, the crystal in question shows extremely small wavelengths of plasmon peaks. Furthermore, this study also covers the 2ω/ω intra- and inter-band contributions to the dominant nonlinear susceptibilities. Findings indicate that these contributions have opposite signs at higher energies and nullify each other. Our calculations show that χxxz, χxzx and χzxx have largest values of nonlinear response but χxxz is the dominant component at IR-VIS region. Moreover, the current study shows significant similarities between linear and nonlinear spectra, when we draw linear one as a function of both ω and 2ω. Finally, our simulation reproduces the experimental results very well.

  19. Interaction of phenanthrene and potassium uptake by wheat roots: a mechanistic model

    PubMed Central

    2013-01-01

    Background Polycyclic aromatic hydrocarbons (PAHs) are potentially carcinogenic, mutagenic and toxic to both human and non-human organisms. Dietary intake of PAHs is a dominant route of exposure for the general population where food crops are a major source of dietary PAHs. Over 20% of main food crops contain PAHs that exceed the control limits in China. However, the mechanisms on PAH accumulation in crops are not well understood. Results Here we report the physiological mechanism of potassium (K+)-stimulated uptake of phenanthrene (PHE, a model PAH) in wheat. PHE uptake is stimulated by the external K+. The addition of blockers (tetraethlyammonium and barium) for K+ channels does not suppress the process, suggesting that K+ channels are not involved. The introduction of PHE and K+ elicits a much greater depolarization in root cell membrane potential than that of either PHE or K+. K+ activates the plasma membrane proton (H+)-ATPase in a K+-dependent manner. The pattern is quite similar to that in PHE uptake in the presence of K+. The external medium pH treated with PHE and K+ is higher than that with K+, and lower than that with PHE, indicating that H+ pump involves in the interaction between PHE and K+ uptake. Conclusions Therefore, it is concluded that a K+ influx/H+ efflux reaction is coupled with the transport of PHE into wheat root cells. Our results provide a novel insight into the PHE uptake by crop roots. PMID:24160457

  20. Cyclodextrin-grafted electrospun cellulose acetate nanofibers via “Click” reaction for removal of phenanthrene

    NASA Astrophysics Data System (ADS)

    Celebioglu, Asli; Demirci, Serkan; Uyar, Tamer

    2014-06-01

    Beta-cyclodextrin (β-CD) functionalized cellulose acetate (CA) nanofibers have been successfully prepared by combining electrospinning and “click” reaction. Initially, β-CD and electrospun CA nanofibers were modified so as to be azide-β-CD and propargyl-terminated CA nanofibers, respectively. Then, “click” reaction was performed between modified CD molecules and CA nanofibers to obtain permanent grafting of CDs onto nanofibers surface. It was observed from the SEM image that, while CA nanofibers have smooth surface, there were some irregularities and roughness at nanofibers morphology after the modification. Yet, the fibrous structure was still protected. ATR-FTIR and XPS revealed that, CD molecules were successfully grafted onto surface of CA nanofibers. The adsorption capacity of β-CD-functionalized CA (CA-CD) nanofibers was also determined by removing phenanthrene (polycyclic aromatic hydrocarbons, PAH) from its aqueous solution. Our results indicate that CA-CD nanofibers have potential to be used as molecular filters for the purpose of water purification and waste water treatment by integrating the high surface area of nanofibers with inclusion complexation property of CD molecules.

  1. Influence of a dispersant on the bioaccumulation of phenanthrene by topsmelt (Atherinops affinis).

    PubMed

    Mielbrecht, E E; Wolfe, M F; Tjeerdema, R S; Sowby, M L

    2005-05-01

    Chemical dispersants enhance oil spill dispersion by forming water-accommodated micelles with oil droplets. However, how dispersants alter bioavailability and subsequent bioaccumulation of hydrocarbons is not well understood. Thus, the goal was to investigate the influence of a chemical dispersant on the disposition (uptake, biotransformation, and depuration) of a model hydrocarbon, [14C]-phenanthrene ([14C]PHN), by larval topsmelt (Atherinops affinis). Exposure was via aqueous-only or combined dietary and aqueous routes from a water-accommodated fraction (WAF) of Prudhoe Bay Crude Oil (PBCO) or a WAF of Corexit 9527-dispersed PBCO (DO). Trophic transfer was measured by incorporating into exposure media both a rotifer (Brachionus plicatilis) as food for the fish and a phytoplankton (Isochrysis galbana) as food for the rotifers. Short-term (4 h) bioconcentration of PHN was significantly decreased in topsmelt when oil was treated with dispersant (P < 0.05), but differences diminished after 12 h. When trophic transfer was incorporated, PHN accumulation was initially delayed but after 12 h attained similar levels. Dispersant use also significantly decreased the proportion of biotransformed PHN (as 9-phenanthrylsulfate) produced by topsmelt (P < 0.05). However, overall PHN depuration was not affected by dispersant use. Thus, chemical dispersant use in oil spill response may reduce short-term uptake but not long-term accumulation of hydrocarbons such as PHN in pelagic fish. PMID:15814309

  2. Phenanthrene exposure induces cardiac hypertrophy via reducing miR-133a expression by DNA methylation

    PubMed Central

    Huang, Lixing; Xi, Zhihui; Wang, Chonggang; Zhang, Youyu; Yang, Zhibing; Zhang, Shiqi; Chen, Yixin; Zuo, Zhenghong

    2016-01-01

    Growing evidence indicates that there is an emerging link between environmental pollution and cardiac hypertrophy, while the mechanism is unclear. The objective of this study was to examine whether phenanthrene (Phe) could cause cardiac hypertrophy, and elucidate the molecular mechanisms involved. We found that: 1) Phe exposure increased the heart weight and cardiomyocyte size of rats; 2) Phe exposure led to enlarged cell size, and increased protein synthesis in H9C2 cells; 3) Phe exposure induced important markers of cardiac hypertrophy, such as atrial natriuretic peptide, B-type natriuretic peptide, and c-Myc in H9C2 cells and rat hearts; 4) Phe exposure perturbed miR-133a, CdC42 and RhoA, which were key regulators of cardiac hypertrophy, in H9C2 cells and rat hearts; 5) Phe exposure induced DNA methyltransferases (DNMTs) in H9C2 cells and rat hearts; 6) Phe exposure led to methylation of CpG sites within the miR-133a locus and reduced miR-133a expression in H9C2 cells; 7) DNMT inhibition and miR-133a overexpression could both alleviate the enlargement of cell size and perturbation of CdC42 and RhoA caused by Phe exposure. These results indicated that Phe could induce cardiomyocyte hypertrophy in the rat and H9C2 cells. The mechanism might involve reducing miR-133a expression by DNA methylation. PMID:26830171

  3. Synergistic effects of inorganic salt and surfactant on phenanthrene removal from aqueous solution by sediment.

    PubMed

    Zhang, Xiaoyan; Wu, Yaoguo; Hu, Sihai; Lu, Cong

    2014-01-01

    The economic and effective application of surfactant enhanced remediation (SER) technology in a sediment-freshwater/saline water system was investigated by batch method using the combined effects of inorganic salt (sodium chloride, NaCl) and anionic surfactant (sodium dodecylbenzene sulfonate (SDBS)) on phenanthrene (PHE) removal via sorption by sediment. In all cases, PHE sorption followed a linear equation and partition as the main mechanism for PHE removal from aqueous solution. Separate addition of SDBS (2 mmol L(-1)) and NaCl (2-100 mmol L(-1)) moderately enhanced PHE removal, while with their combined addition the enhancement was substantial, and the removal efficiency achieved a peak of 92.8%. The combined effect expressed a synergy, and the sorption enhancement increased by factors of 2.7, 3.2 and 3.4 when compared with the sum of the separate entities at elevated salinity. This was because the sorbed SDBS, with increasing amount and a high packing conformation at elevated salinity, outcompeted aqueous SDBS for PHE partition. Moreover, a combination of 2 mmol L(-1) SDBS and 2 mmol L(-1) NaCl was optimal for PHE removal. Therefore, SER technology appears more effective for PHE removal in saline water than in freshwater, and preliminary water quality monitoring is essential for economic and efficient SER application. PMID:25353936

  4. Natural soil mineral nanoparticles are novel sorbents for pentachlorophenol and phenanthrene removal.

    PubMed

    He, Yan; Zeng, Fanfeng; Lian, Zhenghua; Xu, Jianming; Brookes, Philip C

    2015-10-01

    Natural soil montmorillonite and kaolinite nanoparticles (NPs) were tested as efficient sorbents for organic contaminant (OC) removal through mimicking their natural environmental dispersive states. Sorption of both mineral NPs decreased with increasing pH with ionizable pentachlorophenol (PCP), but increased with pH with non-ionizable phenanthrene (PHE), within the pH range of 4-10. In contrast, sorption decreased consistently for both PCP and PHE, as a function of increasing ion concentration (0.001-0.1 mol L(-1)). Sorption differences were likely caused by the electrolytic conditions dependent upon surface chemistry of OCs and mineral NPs. The results confirmed that the highly dispersive soil mineral NPs would prevail over both engineered NPs and their regular μm-sized colloids for OC removal, due to their ecological advantages and higher sorption properties. This finding provided a realistic assessment of the environmental function of soil natural minerals in water once they are released from soil into OC polluted aqueous systems. PMID:26005862

  5. Morphological and physiological responses of maize (Zea mays) exposed to sand contaminated by phenanthrene.

    PubMed

    Dupuy, Joan; Ouvrard, Stéphanie; Leglize, Pierre; Sterckeman, Thibault

    2015-04-01

    Phytoremediation is promising, but depends on clearly understanding contaminants' impact on plant functioning. We therefore focused on the impact of polycyclic aromatic hydrocarbons (PAH) on cultivated plants and understanding the impact of phenanthrene (PHE) on maize functioning (Zea mays). Cultivation was conducted under controlled conditions on artificially contaminated sand with PHE levels increasing from 50 to 750 mg PHE kg(-1). After four weeks, plants exposed to levels above 50 mg PHE kg(-1) presented decreased biomasses and reduced photosynthetic activity. These modifications were associated with higher biomass allocations to roots and lower ones to stems. The leaf biomass proportion was similar, with thinner blades than controls. PHE-exposed plant showed modified root architecture, with fewer roots of 0.2 and 0.4 mm in diameter. Leaves were potassium-deplete, but calcium, phosphorus, magnesium and zinc-enriched. Their content in nitrogen, iron, sulfur and manganese was unaffected. These responses resembled those of water-stress, although water contents in plant organs were not affected by PHE and water supply was not limited. They also indicated a possible perturbation of both nutritional functioning and photosynthesis. PMID:25496734

  6. Study of phenanthrene utilizing bacterial consortia associated with cowpea (Vigna unguiculata) root nodules.

    PubMed

    Sun, Ran; Crowley, David E; Wei, Gehong

    2015-02-01

    Many legumes have been selected as model plants to degrade organic contaminants with their special associated rhizosphere microbes in soil. However, the function of root nodules during microbe-assisted phytoremediation is not clear. A pot study was conducted to examine phenanthrene (PHE) utilizing bacteria associated with root nodules and the effects of cowpea root nodules on phytoremediation in two different types of soils (freshly contaminated soil and aged contaminated soil). Cowpea nodules in freshly-contaminated soil showed less damage in comparison to the aged-contaminated soil, both morphologically and ultra-structurally by scanning electron microscopy. The study of polycyclic aromatic hydrocarbon (PAH) attenuation conducted by high performance liquid chromatography revealed that more PAH was eliminated from liquid culture around nodulated roots than nodule-free roots. PAH sublimation and denaturation gradient gel electrophoresis were applied to analyze the capability and diversity of PAH degrading bacteria from the following four parts of rhizo-microzone: bulk soil, root surface, nodule surface and nodule inside. The results indicated that the surface and inside of cowpea root nodules were colonized with bacterial consortia that utilized PHE. Our results demonstrated that root nodules not only fixed nitrogen, but also enriched PAH-utilizing microorganisms both inside and outside of the nodules. Legume nodules may have biotechnological values for PAH degradation. PMID:25601371

  7. Effects of cowpea (Vigna unguiculata) root mucilage on microbial community response and capacity for phenanthrene remediation.

    PubMed

    Sun, Ran; Belcher, Richard W; Liang, Jianqiang; Wang, Li; Thater, Brian; Crowley, David E; Wei, Gehong

    2015-07-01

    Biodegradation of polycyclic aromatic hydrocarbons (PAHs) is normally limited by their low solubility and poor bioavailability. Prior research suggests that biosurfactants are synthesized as intermediates during the production of mucilage at the root tip. To date the effects of mucilage on PAH degradation and microbial community response have not been directly examined. To address this question, our research compared 3 cowpea breeding lines (Vigna unguiculata) that differed in mucilage production for their effects on phenanthrene (PHE) degradation in soil. The High Performance Liquid Chromatography results indicated that the highest PHE degradation rate was achieved in soils planted with mucilage producing cowpea line C1, inoculated with Bradyrhizobium, leading to 91.6% PHE disappearance in 5 weeks. In root printing tests, strings treated with mucilage and bacteria produced larger clearing zones than those produced on mucilage treated strings with no bacteria or bacteria inoculated strings. Experiments with 14C-PHE and purified mucilage in soil slurry confirmed that the root mucilage significantly enhanced PHE mineralization (82.7%), which is 12% more than the control treatment without mucilage. The profiles of the PHE degraders generated by Denaturing gradient gel electrophoresis suggested that cowpea C1, producing a high amount of root mucilage, selectively enriched the PHE degrading bacteria population in rhizosphere. These findings indicate that root mucilage may play a significant role in enhancing PHE degradation and suggests that differences in mucilage production may be an important criterion for selection of the best plant species for use in phytoremediation of PAH contaminated soils. PMID:26141877

  8. Ex vivo study of the vasorelaxant activity induced by phenanthrene derivatives isolated from Maxillaria densa.

    PubMed

    Rendón-Vallejo, Priscila; Hernández-Abreu, Oswaldo; Vergara-Galicia, Jorge; Millán-Pacheco, César; Mejía, Armando; Ibarra-Barajas, Maximiliano; Estrada-Soto, Samuel

    2012-12-28

    The phenanthrenes gymnopusin (1), fimbriol A (2), and erianthridin (3) from Maxillaria densa were found to induce significant relaxant effects in a concentration-dependent and endothelium-independent manner on aortic rings precontracted with norepinephrine (NE, 0.1 μM) and KCl (80 mM). Compound 1 was the most active and also inhibited the cumulative concentration-response contraction of NE or CaCl(2). Contractions induced by FPL 64176, an agonist of L-type voltage-dependent calcium channels, were blocked by 1. The potassium channel blockers glibenclamide and TEA (tetraethylammonium) reduced the relaxations induced by 1. Nevertheless, the effect of 1 was not modified by 1H-[1,2,4]oxadiazolo[4,3-a]quinoxalin-1-one, a specific soluble guanylate cyclase inhibitor. The functional results obtained suggest that 1 induces relaxation through an endothelium-independent pathway by the control of cationic channels (calcium channel blockade and potassium channel opening) in the myogenic response of rat aortic rings. PMID:23234371

  9. Importance of unburned coal carbon, black carbon, and amorphous organic carbon to phenanthrene sorption in sediments.

    PubMed

    Cornelissen, Gerard; Gustafsson, Orjan

    2005-02-01

    The aim of this paper was to estimate the contribution to total phenanthrene sorption from unburned coal and black carbon (BC; soot and charcoal) in sediment. We determined sorption isotherms for five Argonne Premium Coal standards over a wide concentration interval (0.01-10 000 ng/L). The coals showed strong and nonlinear sorption (carbon-normalized K(F) = 5.41-5.96; nF = 0.68-0.82). Coal sorption appeared to become more nonlinear with increasing coal maturity. The coal's specific surface area appeared to influence K(F). On the basis of the current coal sorption observations combined with earlier petrographic analyses and BC sorption experiments, we calculated for one particular sediment that coal, BC, and "other" OC were all important to PHE sorption in the environmentally relevant nanogram per liter range. This indicates that it is important to consider strong sorption to coal in the risk assessment of coal-impacted geosorbents (e.g., river beds) where coal is mined/shipped and manufactured gas plant sites. PMID:15757337

  10. Biodegradation of pyrene and phenanthrene by bacterial consortium and evaluation of role of surfactant.

    PubMed

    Kumari, B; Rajput, S; Gaur, P; Singh, S N; Singh, D P

    2014-01-01

    High molecular weight poly aromatic hydrocarbons (HMW PAHs) are well known for their hydrophobicity and they get strongly adsorbed onto the soil particles. Generally, surfactants facilitate the biodegradation of PAH by enhancing their solubility and desorption of hydrophobic compounds from soil particles. To investigate the role of synthetic surfactant in biodegradation of PAHs, two bacterial strains BP10 and P2 were incubated in soil spiked with pyrene and phenantherene (100 μg g-1of soil each) in isolation and in combination with/without Tween 80. After 14 days of incubation, pyrene and phenantherene were degraded by a combination of BP10 and P2 to the extent of 98% and 99%, respectively. Addition of tween 80 reduced the degradation of pyrene and phenantherene by 35 and 10%, respectively. Biosurfactant produced by selected strains i.e. BP10 and P2 could enhance desorption of pyrene (100 μg g-1of soil) by about 27% and 12%, respectively. However, desorption activity was relatively higher (32 and 29%, respectively) in case of phenanthrene (100 μg g-1of soil) from the spiked soil. Present study showed that in spite of additional chemical surfactant, bioaugmentation of highly petroleum hydrocarbon degrading bacterial combination was very effective in boosting the bioremediation of PAHs- contaminated sites. PMID:25535708

  11. Chronic toxicity of phenanthrene to the marine polychaete worm, Nereis (Neanthes) arenaceodentata

    SciTech Connect

    Emery, V.L. Jr.; Dillon, T.M.

    1996-02-01

    Polycyclic aromatic hydrocarbons (PAHs) are widely distributed in the environment. While environmental concentrations are generally below acutely, lethal levels, chronic, low level exposures may result in subtle sublethal effects. PAHs accumulate in bottom sediments and may represent a hazard to the benthos. Polychaetes are important members of this community. The objective of this study is to evaluate the chronic sublethal effects of one PAH, phenanthrene (PHN), on the polychaete worm, Nereis arenaceodentata. PHN was selected because of its high toxicity to marine invertebrates relative to other PAHs. The response of bivalves to heavy metals and other toxins has usually been determined by observing valve position. Since mussels close their valves to avoid noxious stimuli, experimental delivery of chemicals is uncertain. To obtain constant results. Preston employed plastic spacers to hold the valves apart. This obviates the observation of valve position as an index of response, and some other method is required. Electromyography of intact mussels is one such index, and is shown to be a simple, effective and quantitative measurement of activity. Experiments are reported on the effects of added mercury on salt water and fresh water species. Parts of this Nvork have appeared in brief form.

  12. Vibrationally resolved high-resolution NEXAFS and XPS spectra of phenanthrene and coronene

    SciTech Connect

    Fronzoni, Giovanna; Baseggio, Oscar; Stener, Mauro; Hua, Weijie; Tian, Guangjun; Luo, Yi; Apicella, Barbara; Alfé, Michela; Simone, Monica de; Kivimäki, Antti; Coreno, Marcello

    2014-07-28

    We performed a combined experimental and theoretical study of the C1s Near-Edge X-ray Absorption Fine-Structure (NEXAFS) spectroscopy and X-ray Photoelectron Spectroscopy in the gas phase of two polycyclic aromatic hydrocarbons (phenanthrene and coronene), typically formed in combustion reactions. In the NEXAFS of both molecules, a double-peak structure appears in the C1s → LUMO region, which differ by less than 1 eV in transition energies. The vibronic coupling is found to play an important role in such systems. It leads to weakening of the lower-energy peak and strengthening of the higher-energy one because the 0 − n (n > 0) vibrational progressions of the lower-energy peak appear in nearly the same region of the higher-energy peak. Vibrationally resolved theoretical spectra computed within the Frank-Condon (FC) approximation and linear coupling model agree well with the high-resolution experimental results. We find that FC-active normal modes all correspond to in-plane vibrations.

  13. Identifying trends for understanding the role of humic substances in the environmental behavior of radionuclides

    SciTech Connect

    Czerwinski, K.R.; Buckau, G.

    1999-07-01

    Humic substances are expected to have a major role in the environmental speciation of radionuclides. If the speciation of the radionuclide humic complex can be adequately modeled, predictions of its fate and transport may be possible. Additionally, humic substances have been shown to adsorb to a variety of mineral surfaces. The humic coated surfaces also interact with aqueous radionuclides, complicating environmental behavior. Studies indicate the importance of pH, ionic strength, and humic substance concentration in understanding the impact of humic substances on radionuclide speciation. However, values obtained to describe complexation or sorption vary and are difficult to compare and incorporate into existing geochemical codes due to variations in humic complexation models or concepts. This obscures intercomparison and the utility of the resulting values. This work shows results based on different concepts can be evaluated with the charge neutralization model, yielding similar stability constant values. The consistent stability constants found with the charge neutralization model can be used for intercomparison and identification of behavioral trends. A speciation calculation of a contaminated site using identified trends between humic and fulvic acid are given. The results yield good agreement between calculation and environmental observations. Laboratory experiments validate the identified trend. Comparisons between aquatic and sorb humic acid are presented and similarities useful for modeling are given.

  14. Factors to be considered in the isolation and characterization of aquatic humic substances

    NASA Astrophysics Data System (ADS)

    Malcolm, Ronald L.

    A detailed procedure using XAD-8 resin is presented for the isolation of dissolved fulvic acids and humic acids from water. The procedure entails pressure filtration to remove suspended sediment, sorption of humic substances onto XAD-8 resin at pH 2, desorption of humic substances in base, fulvic/humic separation at pH 1, desalting on XAD-8 resin, hydrogen saturation on cation exchange resin, and freeze-drying. Careful attention must be given to thorough resin cleaning and many procedural details in order to obtain relatively ash-free humic isolates. The equipment required for the procedure is expensive and the method is time consuming, but no other isolation method is known to produce quantitative and unaltered humic isolates from water. The procedure can be used to isolate small quantities (less than 100 mg) of humic substances from water, or it can be scaled to produce large quantities (100 g or more) of humic substances from water. Humic substances may be characterized by several methods. The more useful traditional characterization methods include elemental analysis, ash content, functional group analysis by titration and infrared spectroscopy, and molecular weight analysis. The new characterization methods of 1H-NMR, 13C-NMR, pyrolysis/mass spectroscopy, amino acid analysis, saccharide analysis, and carbon isotopic analysis (14C and 13C content) are usually more definitive than traditional characterizations.

  15. Exploring the high-mass components of humic acid by laser desorption ionization mass spectrometry.

    PubMed

    Chilom, Gabriela; Chilom, Ovidiu; Rice, James A

    2008-05-01

    Leonardite and Elliot soil humic acids have been analyzed by laser desorption ionization mass spectrometry (LDI MS) in the m/z 4000-200,000 range. Positive ion mass spectra for each humic acid obtained under optimum conditions showed a broad high-mass distribution between m/z 20,000 and 80,000. The dependence of the mass distribution on instrumental parameters and solution conditions was used to investigate the nature of the high-mass peaks from humic acid spectra. Our data suggests that macromolecular ions and humic acid aggregates have the same probability of occurrence while cluster ion formation has a low probability of occurrence. PMID:18421699

  16. A new standardized method for quantification of humic and fulvic acids in humic ores and commercial products.

    PubMed

    Lamar, Richard T; Olk, Daniel C; Mayhew, Lawrence; Bloom, Paul R

    2014-01-01

    Increased use of humic substances in agriculture has generated intense interest among producers, consumers, and regulators for an accurate and reliable method to quantify humic acid (HA) and fulvic acid (FA) in raw ores and products. Here we present a thoroughly validated method, the new standardized method for determination of HA and FA contents in raw humate ores and in solid and liquid products produced from them. The methods used for preparation of HA and FA were adapted according to the guidelines of the International Humic Substances Society involving alkaline extraction followed by acidification to separate HA from the fulvic fraction. This is followed by separation of FA from the fulvic fraction by adsorption on a nonionic macroporous acrylic ester resin at acid pH. It differs from previous methods in that it determines HA and FA concentrations gravimetrically on an ash-free basis. Critical steps in the method, e.g., initial test portion mass, test portion to extract volume ratio, extraction time, and acidification of alkaline extract, were optimized for maximum and consistent recovery of HA and FA. The method detection limits for HA and FA were 4.62 and 4.8 mg/L, respectively. The method quantitation limits for HA and FA were 14.7 and 15.3 mg/L, respectively. PMID:25051616

  17. Effect of low-molecular-weight organic acids on photo-degradation of phenanthrene catalyzed by Fe(III)-smectite under visible light.

    PubMed

    Jia, Hanzhong; Chen, Hongxia; Nulaji, Gulimire; Li, Xiyou; Wang, Chuanyi

    2015-11-01

    The photolysis of polycyclic aromatic hydrocarbons (PAHs) is potentially an important process for its transformation and fate on contaminated soil surfaces. In this study, phenanthrene is employed as a model to explore PAH photodegradation with the assistance of Fe(III)-smectite under visible-light while focusing on roles played by five low-molecular-weight organic acids (LMWOAs), i.e., malic acid, oxalic acid, citric acid, ethylenediaminetetraacetic acid (EDTA), and nitrilotriacetic acid. Our results show that oxalic acid is most effective in promoting the photodegradation of phenanthrene, while only a slight increase in the rate of phenanthrene photodegradation is observed in the presence of malic acid. Electron paramagnetic resonance experiments confirm the formation of CO2(-) radicals in the presence of malic and oxalic acid, which provides strong evidence for generating OH and subsequent photoreaction pathways. The presence of EDTA or nitrilotriacetic acid significantly inhibits both Fe(II) formation and phenanthrene photodegradation because these organic anions tend to chelate with Fe(III), leading to decreases in the electron-accepting potential of Fe(III)-smectite and a weakened interaction between phenanthrene and Fe(III)-smectite. These observations provide valuable insights into the transformation and fate of PAHs in the natural soil environment and demonstrate the potential for using some LMWOAs as additives for the remediation of contaminated soil. PMID:26091867

  18. Mycoremediation of manganese and phenanthrene by Pleurotus eryngii mycelium enhanced by Tween 80 and saponin.

    PubMed

    Wu, Minghui; Xu, Yongan; Ding, Wenbo; Li, Yuanyuan; Xu, Heng

    2016-08-01

    Bioremediation of areas co-contaminated with metals and polycyclic aromatic hydrocarbons (PAHs) by mushrooms has attracted considerable attention in recent years. In this study, Pleurotus eryngii was introduced for the removal of Mn and phenanthrene (Phe) from potato liquid medium (PDL) simultaneously. Effects of Tween 80 and saponin on P. eryngii growth together with Mn uptake as well as Phe removal were investigated. Although pollutants had a negative effect on mycelial morphology and growth, P. eryngii could still tolerate and remove Mn and Phe. Tween 80 increased removal of Mn and Phe through increase of P. eryngii growth, Phe solubility, pollutants bioavailability, and specific surface area of mycelium pellets, moreover, the activities of manganese peroxidase (MnP) and laccase, which played an important role on PAHs biodegradation. The maximal removal of Mn and Phe was achieved (92.17 and 93.85 % after 15 days incubation, respectively) with 0.6 g L(-1) Tween 80. Treatments with saponin markedly inhibited P. eryngii growth (50.17-66.32 % lower relative to control) due to its fungistatic activity. Nevertheless, saponin could slightly enhance Phe removal through increasing solubility of Phe, and Phe removal rate varied from 80.53 to 87.06 % in saponin treatments. Joint stress of Mn and Phe induced a strong antioxidative response, and superoxide dismutase (SOD) activity decreased in surfactants-treated mycelium compared with control. Generally, Tween 80 was more suitable for strengthening mycoremediation by P. eryngii than saponin, and could be a promising alternative for the remediation of heavy metals and PAHs co-contaminated sites by mushrooms. PMID:27102128

  19. Biosurfactants from Acinetobacter calcoaceticus BU03 enhance the solubility and biodegradation of phenanthrene.

    PubMed

    Zhao, Zhenyong; Wong, Jonathan W C

    2009-03-01

    A thermophilic bacterial strain, Acinetobacter calcoaceticus BU03, with a biosurfactant-producing capability, was isolated from petroleum-contaminated soil with an improved procedure which employed the solubilization of polycyclic aromatic hydrocarbons (PAHs), i.e. naphthalene in agar plate, as a selection criterion. Crude biosurfactant was recovered from the culture of BU03 by extraction with n-hexane, and its properties were investigated. Biosurfactants from A. calcoaceticus BU03 constitute a thermo-stable mixture, composed of different agents with surface activities. At their critical micelle concentration (CMC) of 152.4 mg L(-1), the crude biosurfactants produced from A. calcoaceticus BU03 decreased the air-water surface tension to 38.4 mN m(-1). In thermophilic conditions, the emulsifying activity is 2.8 times that of Tween 80. The effects of the biosurfactants produced by A. calcoaceticus on the solubility and biodegradation of PAHs were investigated in batch systems. Biosurfactants produced by A. calcoaceticus BU03 at 25 times their CMC significantly increased the apparent aqueous solubility of phenanthrene (PHE), pyrene (PYR) and benzo(a)pyrene (B[a]P) to 54.3, 6.33 and 2.08 mg L(-1), respectively. In aqueous system, the biosurfactants at concentrations of 0.5 CMC and 1 CMC slightly enhanced the biodegradation of PHE by a consortium of PAH-degrading microrganisms. Results indicate that biosurfactants from A. calcoaceticus BU03 have potential to enhance the removal of PAHs from contaminated sites. PMID:19438062

  20. Inoculating plants with the endophytic bacterium Pseudomonas sp. Ph6-gfp to reduce phenanthrene contamination.

    PubMed

    Sun, Kai; Liu, Juan; Gao, Yanzheng; Sheng, Yuehui; Kang, Fuxing; Waigi, Michael Gatheru

    2015-12-01

    Plant organic contamination poses a serious threat to the safety of agricultural products and human health worldwide, and the association of endophytic bacteria with host plants may decrease organic pollutants in planta. In this study, we firstly determined the growth response and biofilm formation of endophytic Pseudomonas sp. Ph6-gfp, and then systematically evaluated the performance of different plant colonization methods (seed soaking (SS), root soaking (RS), leaf painting (LP)) for circumventing the risk of plant phenanthrene (PHE) contamination. After inoculation for 48 h, strain Ph6-gfp grew efficiently with PHE, oxalic acid, or malic acid as the sole sources of carbon and energy. Moreover, strain Ph6-gfp could form robust biofilms in LB medium. In greenhouse hydroponic experiments, strain Ph6-gfp could actively colonize inoculated plants internally, and plants colonized with Ph6-gfp showed a higher capacity for PHE removal. Compared with the Ph6-gfp-free treatment, the accumulations of PHE in Ph6-gfp-colonized plants via SS, RS, and LP were 20.1, 33.1, and 7.1 %, respectively, lower. Our results indicate that inoculating plants with Ph6-gfp could lower the risk of plant PHE contamination. RS was most efficient for improving PHE removal in whole plant bodies by increasing the cell numbers of Ph6-gfp in plant roots. The findings in this study provide an optimized method to strain Ph6-gfp reduce plant PAH residues, which may be applied to agricultural production in PAH-contaminated soil. PMID:26263885

  1. Competition between photoisomerization and photocyclization of the cis isomers of n-styrylnaphthalenes and -phenanthrenes.

    PubMed

    Mazzucato, U; Spalletti, A

    2009-12-31

    The isomerization and cyclization photoreactions of the cis (Z) isomers of n-styrylnaphthalenes (n = 1 and 2), n-styrylphenanthrenes (n = 1, 2, 3, 4, and 9), and two related compounds, 3-styrylchrysene and 3-styrylbenzo[c]phenanthrene, were investigated by spectrophotometric and chromatographic techniques. The quantum yields of the two photoreactions were measured in aerated and deaerated nonpolar solvent at room temperature and compared with those reported in the literature for some of the molecules investigated and other related compounds. The combined use of high-performance liquid chromatographic and spectrophotometric techniques made easier the separation of the components of the photoreaction mixtures thus simplifying the study of the isomerization/cyclization competition and the measurement of the UV-vis absorption spectra and the thermal decay kinetics of the dihydrophenanthrene-type intermediates. The conformational equilibria in the ground state and the positional isomerism (n values) notably affect the prevalence of one or the other competitive photoreaction. Oxygen also plays an important role: practically it does not affect the quantum yield of the Z --> E process but has a drastic effect on the formation of the final oxidation product which can proceed even in the presence of traces of air. In three cases, non-negligible formation of a side colorless product was detected. It was assigned to an isomer of the normal photocyclization intermediate (4a,4b-dihydrophenanthrene-type), formed by shift of one or both hydrogen atom(s) to other positions of the rings. Parallel ab initio calculations of the potential energy of the possible conformers helped to explain the structure effects on the competitive photoreactive relaxation pathways. Some correlations between the computed reagent/product energy difference in the ground state and the photocyclization yield and thermal stability of the intermediates were also verified. PMID:20028165

  2. Competition between Photoisomerization and Photocyclization of the Cis Isomers of n-Styrylnaphthalenes and -Phenanthrenes

    NASA Astrophysics Data System (ADS)

    Mazzucato, U.; Spalletti, A.

    2009-09-01

    The isomerization and cyclization photoreactions of the cis (Z) isomers of n-styrylnaphthalenes (n = 1 and 2), n-styrylphenanthrenes (n = 1, 2, 3, 4, and 9), and two related compounds, 3-styrylchrysene and 3-styrylbenzo[c]phenanthrene, were investigated by spectrophotometric and chromatographic techniques. The quantum yields of the two photoreactions were measured in aerated and deaerated nonpolar solvent at room temperature and compared with those reported in the literature for some of the molecules investigated and other related compounds. The combined use of high-performance liquid chromatographic and spectrophotometric techniques made easier the separation of the components of the photoreaction mixtures thus simplifying the study of the isomerization/cyclization competition and the measurement of the UV-vis absorption spectra and the thermal decay kinetics of the dihydrophenanthrene-type intermediates. The conformational equilibria in the ground state and the positional isomerism (n values) notably affect the prevalence of one or the other competitive photoreaction. Oxygen also plays an important role: practically it does not affect the quantum yield of the Z → E process but has a drastic effect on the formation of the final oxidation product which can proceed even in the presence of traces of air. In three cases, non-negligible formation of a side colorless product was detected. It was assigned to an isomer of the normal photocyclization intermediate (4a,4b-dihydrophenanthrene-type), formed by shift of one or both hydrogen atom(s) to other positions of the rings. Parallel ab initio calculations of the potential energy of the possible conformers helped to explain the structure effects on the competitive photoreactive relaxation pathways. Some correlations between the computed reagent/product energy difference in the ground state and the photocyclization yield and thermal stability of the intermediates were also verified.

  3. Reproductive and transgenerational toxicities of phenanthrene on female marine medaka (Oryzias melastigma).

    PubMed

    Sun, Lingbin; Zuo, Zhenghong; Chen, Meng; Chen, Yixin; Wang, Chonggang

    2015-05-01

    Phenanthrene (PHE) is one of the most abundant polycyclic aromatic hydrocarbons in the aquatic environment and often results from oil spills. To assess the effects of PHE on fish, marine medaka (Oryzias melastigma) was exposed to PHE at 0.06, 0.6, 6 and 60 μg/L. The reproductive functions and transgenerational effects were investigated. After 80 days exposure, the percentage of previtellogenic and vitellogenic oocytes in the ovary showed a significant decrease in the 0.06 and 60 μg/L groups. The mRNA levels of salmon-type gonadotropin releasing hormone, the follicle-stimulating hormone FSHβ, and the luteinizing hormone LHβ in the brain; the cytochrome P450 aromatase gene CYP19A and the estrogen receptor α (ERα) in the ovary; and ERα and vitellogenin VTG1 and 2 in the liver all exhibited significant down-regulation in the 0.06 and 60 μg/L groups, but did not significantly change in the 6 μg/L group compared to the control, which was quite consistent with development of the oocytes. A significant elevation of PHE accumulation in the brain in the 0.06 and 60 μg/L groups gave a reasonable explanation for the nonmonotonic dose-response and also elucidated the action pathway via the brain-pituitary-gonadal axis. The reduction of the time to hatch and the increased cardiac rhythm of embryos were in accord with the PHE accumulative levels in the eggs. The results demonstrated that exposure to PHE at both low and high concentrations can inhibit ovary development. In addition, PHE can be maternally transferred to embryos and influence the health and sustainability of the next generation. PMID:25805703

  4. Biochar characteristics produced from food-processing products and their sorptive capacity for mercury and phenanthrene

    NASA Astrophysics Data System (ADS)

    Fotopoulou, Kalliopi N.; Karapanagioti, Hrissi K.; Manariotis, Ioannis D.

    2015-04-01

    Various organic-rich wastes including wood chips, animal manure, and crop residues have been used for biochar production. Biochar is used as an additive to soils to sequester carbon and improve soil fertility but its use as a sorbent for environmental remediation processes is gaining increased attention. Surface properties such as point of zero charge, surface area and pore volume, surface topography, surface functional groups and acid-base behavior are important factors, which affect sorption efficiency. Understanding the surface alteration of biochars increases our understanding of the pollutant-sorbent interaction. The scope of the present work was to evaluate the effect of key characteristics of biochars on their sorptive properties. Raw materials for biochar production were evaluated including byproducts from brewering, coffee, wine, and olive oil industry. The charring process was performed at different temperatures under limited-oxygen conditions using specialized containers. The surface area, the pore volume, and the average pore size of the biochars were determined. Open surface area and micropore volume were determined using t-plot method and Harkins & Jura equation. Raw food-processing waste demonstrates low surface area that increases by 1 order of magnitude by thermal treatment up to 750oC. At temperatures from 750 up to 900oC, pyrolysis results to biochars with surface areas 210-700 m2/g. For the same temperature range, a high percentage (46 to73%) of the pore volume of the biochars is due to micropores. Positive results were obtained when high surface area biochars were tested for their ability to remove organic (i.e. phenanthrene) and inorganic (i.e. mercury) compounds from aqueous solutions. All these properties point to new materials that can effectively be used for environmental remediation.

  5. [Sorption Characteristics of Phenanthrene and 1, 1-Dichloroethene onto Reed Straw Biochar in Aquatic Solutions].

    PubMed

    Wu, Qing-wen; Meng, Liang; Zhang, Zhi-hao; Luo, Qi-shi; Yang, Jie

    2016-02-15

    The purpose of this study was to investigate the sorption characteristics of phenanthrene (PHE) and 1, 1-dichloroethene (1, 1-DCE) onto reed straw biochar at 500 degrees C in aquatic solutions. The sorption mechanisms and effects of solution pH and biochar mass on sorption intensity were discussed. The results showed that the time required to reach sorption equilibrium was 60 min and 480 min for PHE and 1, 1-DCE, respectively, with maximum removal rates of 81, 87% and 90.18%. The sorption kinetics of both PHE and 1, 1-DCE fitted the pseudo-second-order model well, but the pseudo-second-order reaction rate of PHE was higher than that of 1, 1-DCE. Furthermore, the sorption processes were controlled by both membrane diffusion and intra-particle diffusion, and the latter was found to be the rate-controlling step. Sorption isotherms of the two organic pollutants fitted well with the Freundlich equation, and the sorption affinity of 1, 1-DCE onto biochar was greater than that of PHE. The total sorption mechanism of biochar was the combination of partition and adsorption, and dominated by adsorption. The adsorption capacity of 1, 1-DCE was greater than that of PHE, but its partition capacity was much smaller, indicating that pollutants' molecular volume and relative polarity would mainly affect the total sorption. Analysis of Fourier transform infrared spectroscopy (FTIR) demonstrated that oxygen- and hydrogen-containing functional groups and pi--pi interaction were important for PHE and 1, 1-DCE sorption onto biochar. The solution pH value had no significant effect on the sorption intensity of PHE and 1, 1-DCE, however, with biochar mass increasing from 5 mg to 50 mg, the equilibrium sorption amount of PHE and 1, 1-DCE decreased by 6.78 times and 2.18 times, and the removal rate increased by 20.21% and 15.78%, respectively. PMID:27363160

  6. EFFECT OF HUMIC ACID ON UPTAKE AND TRANSFER OF COPPER FROM MICROBES TO CILIATES TO COPEPODS

    EPA Science Inventory

    This research is part of an ongoing project designed to determine the effect of humic acid on the uptake and transfer of metals by marine organisms at the lower end of the food chain. Binding affinities for Cu, Cd, Zn, and Cr to Suwannee River humic acid were determined at variou...

  7. Preparation of waxes and humic acids from brown coal from the Sergeevskoe deposit

    SciTech Connect

    L.P. Noskova; A.V. Rokhin; A.P. Sorokin

    2007-06-15

    The comparative extraction of coal with organic solvents was performed. Humic acids were separated from solid residues. The yields, particle-size distributions, and chemical compositions of the resulting products were analyzed. It was demonstrated that brown-coal wax and humic fertilizers can potentially be obtained using coal from the Sergeevskoe deposit.

  8. Field Evaluations of Commercial Humic Products: Current Knowledge and Future Needs.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Humic products are extracts of lignite or leonardite, which are immature coals. Humic products are sold commercially; their advertisements claim they will improve plant growth when applied to plants or soil. They are bought by small proportions of row crop farmers and growers of flowers, vegetables,...

  9. Enzymatically- and Ultraviolet-labile Phosphorus in Humic Acid Fractions From Rice Soils

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Humic acid is an important soil component which can improve nutrient availability and impact other important chemical, biological, and physical properties of soils. We investigated the lability of phosphorus (P) in the mobile humic acid (MHA) and calcium humate (CaHA) fractions of four rice soils as...

  10. Adsorption/desorption in a system consisting of humic acid, heavy metals, and clay minerals

    SciTech Connect

    Liu, A.; Gonzalez, R.D.

    1999-10-01

    Metal adsorption/desorption in a system consisting of humic acid, metal ions, and clay minerals is described. Montmorillonite and purified humic acid were selected as prototype materials for this study. At a constant ionic strength, the amount of humic acid adsorbed on montmorillonite decreases when pH is increased. A slight increase in humic acid adsorption on montmorillonite is observed when there are bivalent metals present in the system. The metal adsorption on montmorillonite does not correlate to the amount of humic acid adsorbed on montmorillonite. Montmorillonite with preadsorbed humic acid does not show a significant change in the capacity of adsorbed metal ions. An increase in the ionic strength at a pH of 6.5 results in an increase in the adsorption of lead on montmorillonite in the presence of humic acid, while at a lower pH, the increase in ionic strength results in a decrease in metal adsorption. The bridging of bivalent metal ions between montmorillonite and humic acid is proposed as the dominant adsorption mechanism.

  11. Metal ion adsorption to complexes of humic acid and metal oxides: Deviations from the additivity rule

    SciTech Connect

    Vermeer, A.W.P.; McCulloch, J.K.; Van Riemsdijk, W.H.; Koopal, L.K.

    1999-11-01

    The adsorption of cadmium ions to a mixture of Aldrich humic acid and hematite is investigated. The actual adsorption to the humic acid-hematite complex is compared with the sum of the cadmium ion adsorptivities to each of the isolated components. It is shown that the sum of the cadmium ion adsorptivities is not equal to the adsorption to the complex. In general, the adsorption of a specific metal ion to the complex can be understood and qualitatively predicted using the adsorptivities to each of the pure components and taking into account the effect of the pH on the interaction between humic acid and iron oxide on the metal ion adsorption. Due to the interaction between the negatively charged humic acid and the positively charged iron oxide, the adsorption of metal ions on the mineral oxide in the complex will increase as compared to that on the isolated oxide, whereas the adsorption to the humic acid will decrease as compared to that on the isolated humic acid. As a result, the overall adsorption of a specific metal ion to the complex will be smaller than predicted by the additivity rule when this metal ion has a more pronounced affinity for the humic acid than for the mineral oxide, whereas it will be larger than predicted by the additivity rule when the metal ion has a higher affinity for the oxide than for the humic acid.

  12. Reduction and Reoxidation of Humic Acid: Influence on Spectroscopic Properties and Proton Binding

    SciTech Connect

    Maurer, F.; Christl, I; Kretzschmar, R

    2010-01-01

    Previous studies on proton and metal binding to humic substances have not considered a potential influence of reduction and oxidation of functional groups. Therefore, we investigated how proton binding of a purified soil humic acid was affected by reduction. Reduction of the humic acid was carried out using an electrochemical cell that allowed us to measure the amounts of electrons and protons involved in reduction reactions. We further applied spectroscopic methods (UV-vis, fluorescence, FT-IR, C-1s NEXAFS) to detect possible chemical changes in the humic acid induced by reduction and reoxidation. The effect of reduction on proton binding was determined with acid-base titrations in the pH range 4-10 under controlled redox conditions. During reduction, 0.54 mol kg{sup -1} protons and 0.55 mol kg{sup -1} electrons were transferred to humic acid. NICA-Donnan modeling revealed an equivalent increase in proton-reactive sites (0.52 mol kg{sup -1}) in the alkaline pH-range. Our results indicate that reduction of humic acid increased the amount of proton-reactive sites by 15% compared to the untreated state. Spectroscopic differences between the untreated and reduced humic acid were minor, apart from a lower UV-vis absorption of the reduced humic acid between 400 and 700 nm.

  13. PYROLYSIS-MASS SPECTROMETRY/PATTERN RECOGNITION ON A WELL-CHARACTERIZED SUITE OF HUMIC SAMPLES

    EPA Science Inventory

    A suite of well-characterized humic and fulvic acids of freshwater, soil and plant origin was subjected to pyrolysis-mass spectrometry and the resulting data were analyzed by pattern recognition and factor analysis. A factor analysis plot of the data shows that the humic acids an...

  14. BIOAVAILABILITY AND TROPHIC TRANSFER OF HUMIC-BOUND COPPER FROM BACTERIA TO ZOOPLANKTON

    EPA Science Inventory

    The effect of humic acid (HA) on uptake and transfer of Cu by selected marine organisms from the microbial loop was determined. Bacteria grown to stationary phase in cultures with and without 15 ug Cu l -1 and with and without 10 mg Suwannee River Humic Acid (SRHA) l -1 were fed ...

  15. AQUATIC HUMIC SUBSTANCES AS SOURCES AND SINKS OF PHOTOCHEMICALLY PRODUCED TRANSIENT REACTIONS

    EPA Science Inventory

    In sunlit surface waters, aquatic humics and nitrate act as sensitizers or precursors for the production of photoreactants such as singlet oxygen, humic-derived peroxy radicals, hydrogen peroxide, and solvated electrons. ifetimes of the various reactants are controlled by their r...

  16. AQUATIC HUMIC SUBSTANCES AS SOURCES AND SINKS OF PHOTOCHEMICALLY PRODUCED TRANSIENT REACTANTS

    EPA Science Inventory

    In sunlit surface waters, aquatic humics and nitrate act as sensitzers or precursors for the production of photoreactants such as singlet oxygen, humic-derived peroxy radicals, hydrogen peroxide, and solvated electrons. ifetimes of the various reactants are controlled by their re...

  17. XANES studies of oxidation states of sulfur in aquatic and soil humic substances

    SciTech Connect

    Xia, K.; Weesner, F.; Bleam, W.F.; Helmke, P.A.; Bloom, P.R.; Skyllberg, U.L.

    1998-09-01

    Sulfur K-edge x-ray absorption near-edge structure spectroscopy (XANES) was used to identify multiple organic S oxidation states in aquatic and soil humic substances. The XANES results suggest that S in humic substances exists in four major oxidation groups similar to sulfate ester, sulfonate, sulfoxide, and thiol-sulfide. Thiol S cannot be separated from sulfide X and must be considered as a single thiol-sulfide peak. The second derivative spectra suggest the existence of thiophene and sulfone S. The relative quantities of each major S form in humic samples were estimated based on the integrated cross section of each s {r_arrow} p transition peak corresponding to different S oxidation states in the S K-edge XANES spectra. The XANES results of the four humic samples used in this study appear to reflect the environmental settings where the humic substances originally formed. The percentage of the most reduced organic S (thiol-sulfide and possibly thiophene) in humic substances follows the sequence:aquatic samples > organic soil sample > mineral soil sample. The percentage of most oxidized S (sulfate group) was the greatest in the humic substance from a mineral soil and the lowest in the aquatic humic substances.

  18. EFFECTS OF ALUMINUM-INDUCED AGGREGATION ON THE FLUORESCENCE OF HUMIC SUBSTANCES. (R822251)

    EPA Science Inventory

    Aluminum-induced aggregates of terrestrial and aquatic humic acid standards from the International Humic Substances Society are shown to be fluorescent by means of a multiwavelength fluorescence anisotropy experiment in which the data was treated with a model for nonspherical ...

  19. Capillary Electrophoresis and Fluorescence Excitation-Emission Matrix Spectroscopy for Characterization of Humic Substances

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Capillary electrophoresis (CE) and fluorescence spectroscopy have been used in natural organic matter (NOM) studies. In this study, we characterized five fulvic acids, six humic acids and two unprocessed NOM samples obtained from the International Humic Substances Society (IHSS) using these two ana...

  20. Distinguishing Black Carbon from Biogenic Humic Substances in Soil Clay Fractions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Most models of soil humic substances include a substantial component of aromatic carbon (C) either as the backbone of humic heteropolymers or as a significant component of supramolecular aggregates of degraded biopolymers. Here we report that most of the aromatic C in the clay fraction of three stud...

  1. KINETIC ASPECTS OF CATION-ENHANCED AGGREGATION IN AQUEOUS HUMIC ACIDS. (R822832)

    EPA Science Inventory

    The cation-enhanced formation of hydrophobic domains in aqueous humic acids has been shown to be a slow process, consistent with the evolution and disintegration of humic acid configurations over periods lasting from days to weeks. After the addition of a magnesium salt to a humi...

  2. Mid-Infrared Spectroscopic Properties of Humic Acid and Fulvic Acid-Soil Mixtures

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The detection of humic materials in soils is essential in order to determine organic matter (SOM) stability and C sequestration on agricultural land. Mid-Infrared (MidIR) spectroscopy has been used to characterize SOM quality [1], study extracted soil humic acids [2], develop calibrations for quanti...

  3. CHARACTERIZATION OF HUMIC ACID SIZE FRACTIONS BY SEC AND MALS (R822832)

    EPA Science Inventory

    Latahco silt-loam humic acid was separated on a preparatory scale by size exclusion chromatography (SEC) on a gravity-fed Sepharose column. Four fractions from this separation were collected and further analyzed, along with whole humic acid, by high-performance SEC coupled with a...

  4. Activators of Biochemical and Physiological Processes in Plants Based on Fine Humic Acids

    NASA Astrophysics Data System (ADS)

    Churilov, G.; Polishuk, S.; Kutskir, M.; Churilov, D.; Borychev, S.

    2015-11-01

    This article describes the application of ultrafine humic acids as growth promoters and development of crops, for example corn. During the study we determined the optimal concentration of humic acids in ultrafine state for presowing treatment of seeds of maize. An analysis of laboratory and field tests was presented. We showed the relationship between physiological changes and biochemical processes.

  5. Clay-humic Complexes in Soil Microaggregates of a Prairie Soil

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Microaggregates (5 to 50 um) in Midwestern prairie soils are composed primarily of intimate associations of diffuse filamentous humic substances and smectite. The humic material coats surfaces of the smectites and bridges from one smectite quasicrystal to another and between different locations on t...

  6. Analysis of Phosphorus in Soil Humic Acid Fractions by Enzymatic Hydrolysis and Ultraviolet Irradiation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Humic acid is an important soil component which influences chemical, biological, and physical soil properties. In this study, we investigated lability of phosphorus (P) in the mobile humic acid (MHA) and calcium humate (CaHA) fractions of four soils by orthophosphate-releasing enzymatic hydrolysis a...

  7. Mid-Infrared Spectroscopic Properties of Humic Acid and Fulvic Acid-Soil Mixtures.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The detection of humic materials in soils is essential in order to determine organic matter (SOM) stability and C sequestration on agricultural land. Mid-Infrared (MidIR) spectroscopy has been used to characterize SOM quality [1], study extracted soil humic acids [2], develop calibrations for quanti...

  8. The effects of CYP1A inhibition on alkyl-phenanthrene metabolism and embryotoxicity in marine medaka (Oryzias melastigma).

    PubMed

    Mu, Jingli; Jin, Fei; Wang, Juying; Wang, Ying; Cong, Yi

    2016-06-01

    Alkylated polycyclic aromatic hydrocarbons (alkyl-PAHs) are the predominant form of PAHs in crude oils, of which, 3-5 ring alkyl-PAH may cause dioxin-like toxicity to early life stages of fish. Retene (7-isopropyl-1-methylphenanthrene), a typical alkyl-phenanthrene compound, can be more toxic than phenanthrene, and the mechanism of retene toxicity is likely related to its rapid biotransformation by cytochrome P450 (CYP) enzymes to metabolites with a wide array of structures and potential toxicities. Here, we investigated how α-naphthoflavone (ANF), a cytochrome P450 1A (CYP1A) inhibitor, affected the embryotoxicity of retene and the role that CYP1A inhibition may play in the interactions. Marine medaka (Oryzias melastigma) embryos were exposed, separately or together, to 200 μg/L retene with 0, 5, 10, 100, and 200 μg/L ANF for 14 days. The results showed that ANF significantly inhibited the induction of CYP1A activity by retene; however, ANF interacted with retene to induce significant developmental toxicity and genotoxicity at 10, 100, and 200 μg/L (p < 0.01). Tissue concentrations of retene and its metabolites and lipid hydroperoxide (LPO) activity also increased, whereas the inhibition of the glutathione S-transferase (GST) activity and the alteration in metabolic profiles of retene were observed. The interactions of retene with ANF indicate that CYP1A inhibition was possibly act through different mechanisms to produce similar developmental effects and genotoxicity. Retene metabolites and altered metabolic profile were likely responsible for retene embryotoxicity to marine medaka. Therefore, elevated toxicity of alkyl-phenanthrene under CYP1A inhibitor suggested that the ecotoxicity of PAHs in coastal water may have underestimated the threat of PAHs to fish or ecosystem. PMID:26924701

  9. Comparison of some spectroscopic and physico-chemical properties of humic acids extracted from sewage sludge and bottom sediments

    NASA Astrophysics Data System (ADS)

    Polak, J.; Bartoszek, M.; Sułkowski, W. W.

    2009-04-01

    Comparison of the physico-chemical properties was carried out for humic acids extracted from sewage sludge and bottom sediments. The isolated humic acids were investigated by means of EPR, IR, UV/vis spectroscopic methods and elementary analysis AE. On the basis of earlier studies it was stated that humic acids extracted from sewage sludge can be divided into humic acids extracted from raw sewage sludge and from sewage sludge after the digestion process. The digestion process was found to have the most significant effect on the physico-chemical properties of humic acids extracted from sludge during sewage treatment. Humic acids extracted from sewage sludge had higher free radical concentration than humic acid extracted from bottom sediments. Values of the g-factor were similar for all studied samples. However, it is noteworthy that g-factor values for humic acid extracted from raw sewage sludge and from bottom sediments were lower in comparison to the humic acid extracted from sewage sludge after the fermentation processes. The IR spectra of all studied humic acids confirmed the presence of functional groups characteristic for humic substances. It was also observed that humic acids extracted from bottom sediments had a more aromatic character and contained less carbon, nitrogen and hydrogen than those extracted from the sewage sludge.

  10. Characterization of humic-bound phosphorus in soil by wet chemistry and solution P-31 NMR spectroscopy

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phosphorus (P) has long been known to be present in humic substances from various sources. Only limited information is available on the form and lability of humic-bound, although such information is critical for understanding the role of humic substances in P cycling and nutrition. We extracted the ...

  11. Analysis of carbon functional groups in mobile humic acid and recalcitrant calcium humate extracted from eight US soils

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Solid state 13C nuclear magnetic resonance (NMR) spectroscopy is a common tool to study the structure of soil humic fractions; however, knowledge regarding carbon structural relationships in humic fractions is limited. In this study, mobile humic acid (MHA) and recalcitrant calcium humate (CaHA) fr...

  12. Evaluation of a proposed standardized analytical method for the determination of humic and fulvic acids in commercial products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A constraint to growth of the commercial humic products industry has been the lack of a widely accepted procedure for determining humic acid and fulvic acid concentrations of the products, which has raised regulatory issues. On behalf of the U.S.-based Humic Products Trade Association, we developed ...

  13. Composition of Humic Acids of the Lake Baikal Sediments

    NASA Astrophysics Data System (ADS)

    Vishnyakova, O.; Chimitdorzhieva, G.; Andreeva, D.

    2012-04-01

    Humic substances are the final stage of the biogeochemical transformation of organic matter in the biosphere. Its natural compounds are found not only in soil, peat, coal, and sediments of basins. Chemical composition and properties of humic substances are determined by the functioning of the ecosystem as a whole. Therefore the study of the unique Lake Baikal sediments can provide information about their genesis, as well as the processes of organic matter transformation. For this purpose, preparations of humic acids (HA) were isolated by alkaline extraction method. The composition of HA was investigated by the elemental analyzer CHNS/O PerkinElmer Series II. Various located sediments of the Lake Baikal were the objects of the study: 1 - Chivyrkuisky Bay, 2 - Kotovo Bay, 3 - Selenga river delta near Dubinino village, 4 - Selenga river delta near Murzino village. Data on the elemental composition of HA in terms of ash-free portion show that the carbon content (CC) is of 50-53% with a maximum value in a sample 3, and minimum - in a sample 2. Such values are characteristic also for the soils with low biochemical activity. The hydrogen content is of 4,2-5,3%, a maximum value is in a sample 1. Data recalculation to the atomic percentages identified following regularities. The CC of HA is of 35-39 at. %. Hydrogen content is of 37-43 at. %. According to the content of these elements investigated substances are clearly divided into two groups: HA of the sediments of the Lake Baikal and river Selenga delta. The magnitude of the atomic ratio H/C can be seen varying degrees of condensation of the molecules of humic acids. The high atomic ratio H/C in HA of the former group indicates the predominance of aliphatic structures in the molecules. Humic acids of the later group are characterized by a low value H/C (<1), suggesting a large proportion of aromatic components in HA composition. In sediments of the Selenga river delta there is an addition of organic matter of terrigenous

  14. Beneficial effects of humic acid on micronutrient availability to wheat

    NASA Technical Reports Server (NTRS)

    Mackowiak, C. L.; Grossl, P. R.; Bugbee, B. G.

    2001-01-01

    Humic acid (HA) is a relatively stable product of organic matter decomposition and thus accumulates in environmental systems. Humic acid might benefit plant growth by chelating unavailable nutrients and buffering pH. We examined the effect of HA on growth and micronutrient uptake in wheat (Triticum aestivum L.) grown hydroponically. Four root-zone treatments were compared: (i) 25 micromoles synthetic chelate N-(4-hydroxyethyl)ethylenediaminetriacetic acid (C10H18N2O7) (HEDTA at 0.25 mM C); (ii) 25 micromoles synthetic chelate with 4-morpholineethanesulfonic acid (C6H13N4S) (MES at 5 mM C) pH buffer; (iii) HA at 1 mM C without synthetic chelate or buffer; and (iv) no synthetic chelate or buffer. Ample inorganic Fe (35 micromoles Fe3+) was supplied in all treatments. There was no statistically significant difference in total biomass or seed yield among treatments, but HA was effective at ameliorating the leaf interveinal chlorosis that occurred during early growth of the nonchelated treatment. Leaf-tissue Cu and Zn concentrations were lower in the HEDTA treatment relative to no chelate (NC), indicating HEDTA strongly complexed these nutrients, thus reducing their free ion activities and hence, bioavailability. Humic acid did not complex Zn as strongly and chemical equilibrium modeling supported these results. Titration tests indicated that HA was not an effective pH buffer at 1 mM C, and higher levels resulted in HA-Ca and HA-Mg flocculation in the nutrient solution.

  15. Beneficial effects of humic acid on micronutrient availability to wheat.

    PubMed

    Mackowiak, C L; Grossl, P R; Bugbee, B G

    2001-01-01

    Humic acid (HA) is a relatively stable product of organic matter decomposition and thus accumulates in environmental systems. Humic acid might benefit plant growth by chelating unavailable nutrients and buffering pH. We examined the effect of HA on growth and micronutrient uptake in wheat (Triticum aestivum L.) grown hydroponically. Four root-zone treatments were compared: (i) 25 micromoles synthetic chelate N-(4-hydroxyethyl)ethylenediaminetriacetic acid (C10H18N2O7) (HEDTA at 0.25 mM C); (ii) 25 micromoles synthetic chelate with 4-morpholineethanesulfonic acid (C6H13N4S) (MES at 5 mM C) pH buffer; (iii) HA at 1 mM C without synthetic chelate or buffer; and (iv) no synthetic chelate or buffer. Ample inorganic Fe (35 micromoles Fe3+) was supplied in all treatments. There was no statistically significant difference in total biomass or seed yield among treatments, but HA was effective at ameliorating the leaf interveinal chlorosis that occurred during early growth of the nonchelated treatment. Leaf-tissue Cu and Zn concentrations were lower in the HEDTA treatment relative to no chelate (NC), indicating HEDTA strongly complexed these nutrients, thus reducing their free ion activities and hence, bioavailability. Humic acid did not complex Zn as strongly and chemical equilibrium modeling supported these results. Titration tests indicated that HA was not an effective pH buffer at 1 mM C, and higher levels resulted in HA-Ca and HA-Mg flocculation in the nutrient solution. PMID:11885604

  16. NMR characterization and sorption behavior of agricultural and forest soil humic substances

    NASA Astrophysics Data System (ADS)

    Li, Chengliang; Berns, Anne E.; Séquaris, Jean-Marie; Klumpp, Erwin

    2010-05-01

    Humic substances are the predominant components of the organic matter in the terrestrial system, which are not only important for the physicochemical properties of soil but are also dominant factors for controlling the environmental behaviors and fates of some organic contaminants, such as hydrophobic compounds. Nonylphenol [4-(1-ethyl-1, 3 dimethylpentyl) phenol] (NP), a ubiquitous hydrophobic pollutant, has recently focused the attention owing to its endocrine disruptors property. Sorption behavior of NP on humic substances, which were isolated from agricultural and forest soils, was investigated by using the dialysis technique at room temperature. 14C-labeled NP was used to quantify the partitioning behavior. Humic substances were characterized by 13C Cross-Polarization/Magic-Angle-Spinning Nuclear Magnetic Resonance (CP/MAS NMR). The results showed that the partition parameters of NP on various humic acids were slightly different. Relationships between partition coefficients and the functional groups of humic substances identified by CP/MAS NMR were analyzed.

  17. DNA single strand breakage, DNA adducts, and sister chromatid exchange in lymphocytes and phenanthrene and pyrene metabolites in urine of coke oven workers.

    PubMed Central

    Popp, W; Vahrenholz, C; Schell, C; Grimmer, G; Dettbarn, G; Kraus, R; Brauksiepe, A; Schmeling, B; Gutzeit, T; von Bülow, J; Norpoth, K

    1997-01-01

    OBJECTIVES: To investigate the specificity of biological monitoring variables (excretion of phenanthrene and pyrene metabolites in urine) and the usefulness of some biomarkers of effect (alkaline filter elution, 32P postlabelling assay, measurement of sister chromatid exchange) in workers exposed to polycyclic aromatic hydrocarbons (PAHs). METHODS: 29 coke oven workers and a standardised control group were investigated for frequencies of DNA single strand breakage, DNA protein cross links (alkaline filter elution assay), sister chromatid exchange, and DNA adducts (32P postlabelling assay) in lymphocytes. Phenanthrene and pyrene metabolites were measured in 24 hour urine samples. 19 different PAHs (including benzo(a)pyrene, pyrene, and phenanthrene) were measured at the workplace by personal air monitoring. The GSTT1 activity in erythrocytes and lymphocyte subpopulations in blood was also measured. RESULTS: Concentrations of phenanthrene, pyrene, and benzo(a)pyrene in air correlated well with the concentration of total PAHs in air; they could be used for comparisons of different workplaces if the emission compositions were known. The measurement of phenanthrene metabolites in urine proved to be a better biological monitoring variable than the measurement of 1-hydroxypyrene. Significantly more DNA strand breaks in lymphocytes of coke oven workers were found (alkaline filter elution assay); the DNA adduct rate was not significantly increased in workers, but correlated with exposure to PAHs in a semiquantitative manner. The number of sister chromatid exchanges was lower in coke oven workers but this was not significant; thus counting sister chromatid exchanges was not a good variable for biomonitoring of coke oven workers. Also, indications for immunotoxic influences (changes in lymphocyte subpopulations) were found. CONCLUSIONS: The measurement of phenanthrene metabolites in urine seems to be a better biological monitoring variable for exposure to PAHs than

  18. Novel maturity parameters for mature to over-mature source rocks and oils based on the distribution of phenanthrene series compounds.

    PubMed

    Wang, Zixiang; Wang, Yongli; Wu, Baoxiang; Wang, Gen; Sun, Zepeng; Xu, Liang; Zhu, Shenzhen; Sun, Lina; Wei, Zhifu

    2016-03-01

    Pyrolysis experiments of a low-mature bitumen sample originated from Cambrian was conducted in gold capsules. Abundance and distribution of phenanthrene series compounds in pyrolysis products were measured by GC-MS to investigate their changes with thermal maturity. Several maturity parameters based on the distribution of phenanthrene series compounds have been discussed. The results indicate that the distribution changes of phenanthrene series compounds are complex, and cannot be explained by individual reaction process during thermal evolution. The dealkylation cannot explain the increase of phenanthrene within the EasyRo range of 0.9% ∼ 2.1%. Adding of phenanthrene into maturity parameters based on the methylphenanthrene isomerization is unreasonable, even though MPI 1 and MPI 2 could be used to some extent. Two additional novel and an optimized maturation parameters based on the distribution of phenanthrene series compounds are proposed and their relationships to EasyRo% (x) are established: log(MPs/P) = 0.19x + 0.08 (0.9% < EasyRo% < 2.1%); log(MPs/P) = 0.64x - 0.86 (2.1% < EasyRo% < 3.4%); log(DMPs/TMPs) = 0.71x - 0.55 (0.9% < EasyRo% < 3.4%); log(MTR) = 0.84x - 0.75 (0.9% < EasyRo% < 3.4%). These significant positive correlations are strong argument for using log(MPs/P), log(DMPs/TMPs) and log(MTR) as maturity parameters, especially for mature to over-mature source rocks. PMID:27441263

  19. Humic colloid-borne natural polyvalent metal ions: dissociation experiment.

    PubMed

    Geckeis, H; Rabung, Th; Ngo Manh, T; Kim, J I; Beck, H P

    2002-07-01

    The natural association nature of the humic colloid-borne trace elements is investigated. Rare earth elements (REE) Th and U are chosen as naturally occurring representatives and chemical homologues for actinides of different oxidation states present in nuclear waste. Tri- and tetravalent elements in two investigated Gorleben groundwaters (Gohy-532 and -2227) almost exclusively occur as humic or fulvic colloid-borne species. Their desorption behavior from colloids is examined in the unperturbed groundwater (pH approximately 8) under anaerobic conditions (Ar/1% CO2) by addition of a chelating cation exchanger resin. Particularly, the dissociation process of naturally occurring Eu(III) in the groundwater is compared with the Eu(III) desorption from its humate complex prepared with purified Aldrich humic acid in a buffered aqueous solution at pH approximately 8. The Eu(III) dissociation from the groundwater colloids is found to be considerably slower than found for the humate complex synthesized in the laboratory. This suggests that under natural aquatic conditions the Eu(III) binding in colloids is chemically different from the simple humate complexation as observed in the laboratory experiment. The colloid characterization bythe size exclusion chromatography (SEC) and the flow field-flow fractionation (FFFF) indicates that natural colloid-borne trace elements are found predominantly in colloids of larger size (>15 nm in size), while Eu(III) in its humate complex is found mainly in colloids of hydrodynamic diameters <5 nm. The slower desorption kinetics and the larger colloid size suggest that the polyvalent metal ion binding in natural humic colloids is associated to polynucleation with other co-present trace metal ions. Radiotracer experiments reveal that isotopic equilibria with the naturally colloid-borne trace elements are not attained within a period of more than 100 days, indicating irreversible binding of at least a part of colloid-borne polyvalent trace

  20. Understanding Humic Acid / Zr(IV) Interaction - A Spectromicroscopy Approach

    SciTech Connect

    Rothe, Joerg; Plaschke, Markus; Denecke, Melissa A.

    2007-02-02

    Complexation of Zr(IV) by humic acid (HA) and polyacrylic acid (PAA) is investigated from the point of view of the organic ligand. STXM Spectromicroscopy and C 1s-NEXAFS point to different interaction mechanisms between Zr(IV) cations and oxo/hydroxo colloids and PAA. Under conditions where the metal aquo ion is stable, strong complexes are formed. In contrast, unspecific surface coating is identified when PAA is contacted with Zr(IV) oxo/hydroxide colloids. HA exhibits similar C 1s-NEXAFS features indicating a complexation reaction.

  1. Usage of humic materials for formulation of stable microbial inoculants

    NASA Astrophysics Data System (ADS)

    Kydralieva, K. A.; Khudaibergenova, B. M.; Elchin, A. A.; Gorbunova, N. V.; Muratov, V. S.; Jorobekova, Sh. J.

    2009-04-01

    Some microbes have been domesticated for environment service, for example in a variety of novel applications, including efforts to reduce environmental problems. For instance, antagonistic organisms can be used as biological control agents to reduce the use of chemical pesticides, or efficient degraders can be applied as bioprophylactics to minimise the spread of chemical pollutants. Microorganisms can also be used for the biological clean-up of polluted soil or as plant growth-promoting bacteria that stimulate nutrient uptake. Many microbial applications require large-scale cultivation of the organisms. The biomass production must then be followed by formulation steps to ensure long-term stability and convenient use. However, there remains a need to further develop knowledge on how to optimise fermentation of "non-conventional microorganisms" for environmental applications involving the intact living cells. The goal of presented study is to develop fermentation and formulation techniques for termolabile rhizobacteria isolates - Pseudomonas spp. with major biotechnical potential. Development of efficient and cost-effective media and process parameters giving high cell yields are important priorities. This also involves establishing fermentation parameters yielding cells well adapted to subsequent formulation procedures. Collectively, these strategies will deliver a high proportion of viable cells with good long-term survival. Our main efforts were focused on development of more efficient drying techniques for microorganisms, particularly spray drying and fluidised bed-drying. The advantages of dry formulations are that storage and delivery costs are much lower than for liquid formulations and that long-term survival can be very high if initial packaging is carefully optimised. In order to improve and optimise formulations various kinds of humics-based excipients have been added that have beneficial effects on the viability of the organisms and the storage stability

  2. Reaction of vanadate with aquatic humic substances: An ESR and {sup 51}V NMR study

    SciTech Connect

    Lu, Xi.; Johnson, W.D.; Hook, J.

    1998-08-01

    Electron spin resonance (ESR) spectroscopy and {sup 51}V nuclear magnetic resonance (NMR) spectroscopy have been used to study the interaction of vanadate with aqueous solutions of humic substances (HS) at different pH values and at different concentrations. Under acidic pH conditions, ESR spectra show that humic substances reduce vanadium(V) to vanadium(IV) without further reduction to vanadium(III). The reduced vanadium(IV) ion is bound to oxygen donor atoms, probably at carboxylic acid sites in the humic substances. {sup 51}V NMR spectra show that the VO{sub 2}{sup +} cation is immediately reduced and that the decavanadate cation decomposes to the VO{sub 2}{sup +} cation prior to reduction. The overall rate of reduction depends on both concentration and pH. There is no reduction above pH 6, which suggests that the standard reduction potential of humic substances is about +0.65 V. Near pH 7, vanadate is stabilized by binding to humic substances. As the concentration of humic substances increases, the total vanadium NMR signal intensity decreases. This is due to the quadrupolar nature of the {sup 51}V nucleus that, when bound to humic substances, is invisible in NMR measurements. Quantitative models applied to intensity changes show that the vanadate monomer forms HS0V(V) complexes. The formation equilibrium constant is estimated to be 108 M{sup {minus}1}. At pH above 9, NMR signals appear at {minus}623.6 and at {minus}763.2 ppm when humic substances are added to vanadate solution. The intensities of the signals increase with increasing pH and with increasing concentration of humic substances. These signals appear to be associated with peroxyvanadate anions, which are not bound to humic substances.

  3. An experimental and modeling study of humic acid concentration effect on H(+) binding: Application of the NICA-Donnan model.

    PubMed

    Vidali, Roza; Remoundaki, Emmanouela; Tsezos, Marios

    2009-11-15

    Humic substances are the most abundant components of the colloidal and the dissolved fraction of natural organic matter (NOM) and they are characterized by a strong binding capacity for both metals and organic pollutants, affecting their mobility and bioavailability. The understanding of the humic acidic character is the first necessary step for the study of the mechanisms of binding of other positively charged soluble metal species by humic molecules. The present work, which constitutes part of the Ph.D. thesis of Roza Vidali, reports results on the influence of the concentration of humic acids on the binding of protons obtained through both an experimental and a modeling approach. A reference purified peat humic acid (PPHA) isolated by the International Humic Substances Society (IHSS) and a humic acid from a Greek soil (GHA) were experimentally studied at various humic acid concentrations, ranging from 20 to 200mgL(-1). The proton binding isotherms obtained at different humic acid concentrations have shown that proton binding is dependent on the concentration of both humic acids. Proton binding experimental data were fitted to the NICA-Donnan model and the model parameter values were calculated for humic acid concentrations of 20 and >or=100mgL(-1). The results obtained for the NICA-Donnan parameters at humic acid concentrations >or=100mgL(-1) are in excellent agreement with those reported in the literature. However, these model parameter values cannot be used for modeling and predicting cation binding in natural aquatic systems, where humic acid concentrations are much lower. Two sets of the NICA-Donnan parameters are reported: one for humic acid concentrations of >or=100mgL(-1) and one for humic acid concentration of 20mgL(-1). The significance of the parameters values for each concentration level is also discussed. PMID:19744666

  4. Use of solid-state 13C NMR in structural studies of humic acids and humin from Holocene sediments

    USGS Publications Warehouse

    Hatcher, P.G.; VanderHart, D.L.; Earl, W.L.

    1980-01-01

    13C NMR spectra of solid humic substances in Holocene sediments have been obtained using cross polarization with magic-angle sample spinning techniques. The results demonstrate that this technique holds great promise for structural characterizations of complex macromolecular substances such as humin and humic acids. Quantifiable distinctions can be made between structural features of aquatic and terrestrial humic substances. The aliphatic carbons of the humic substances are dominant components suggestive of input from lipid-like materials. An interesting resemblance is also noted between terrestrial humic acid and humin spectra. ?? 1980.

  5. Role of Humic-Bound Iron as an Electron Transfer Agent in Dissimilatory Fe(III) Reduction

    PubMed Central

    Lovley, Derek R.; Blunt-Harris, Elizabeth L.

    1999-01-01

    The dissimilatory Fe(III) reducer Geobacter metallireducens reduced Fe(III) bound in humic substances, but the concentrations of Fe(III) in a wide range of highly purified humic substances were too low to account for a significant portion of the electron-accepting capacities of the humic substances. Furthermore, once reduced, the iron in humic substances could not transfer electrons to Fe(III) oxide. These results suggest that other electron-accepting moieties in humic substances, such as quinones, are the important electron-accepting and shuttling agents under Fe(III)-reducing conditions. PMID:10473447

  6. Laboratory measurements and modeling of metal-humic interactions under estuarine conditions

    NASA Astrophysics Data System (ADS)

    Hamilton-Taylor, J.; Postill, A. S.; Tipping, E.; Harper, M. P.

    2002-02-01

    Equilibrium dialysis was used to measure Co- and Cu-binding by an isolated peat humic acid (PHA) in controlled laboratory experiments under simulated estuarine conditions: ionic strengths of 0.005 to 0.7 M in NaCl and mixed Na-Mg-Ca chloride solutions, with trace metal concentrations of ˜5 × 10 -7 M, a PHA concentration of 10 mg/L, and at constant pH values of ˜7.8 (Co and Cu) and ˜4.6 (Cu only). Generally, Co- and Cu-humic binding decreased substantially with increasing ionic strength and, in the case of Cu, with decreasing pH. The presence of seawater concentrations of Ca and Mg had a relatively small effect on Co-humic binding and no measurable effect on that of Cu under the experimental conditions. The binding data were well-described by an equilibrium speciation code (the Windermere Humic Aqueous Model, WHAM) after optimising the fits by varying the metal-proton exchange constants for humic acid within justifiable limits (i.e., within 1 standard deviation of the mean exchange constants used in the WHAM database). The main factor producing the observed variations in metal-humic binding at constant pH was the electrostatic effect on the humic molecule. WHAM was used to predict Co- and Cu-humic binding in simulations of real estuaries. Co-humic binding is predicted to be relatively unimportant (generally <5% of total Co), whereas the Cu-humic complex is likely to be the dominant species throughout an estuary. The main factors producing changes in Co- and Cu-humic binding in the real-estuary simulations are the electrostatic effect on the humic molecule, ligand competition (mainly from carbonate species) for metals, and to a lesser extent Ca and Mg competition for humic binding sites. Variations in pH are significant only at the freshwater end of an estuary. WHAM simulations also indicated that competition effects between metals are more likely to occur in freshwaters than in seawater, due to enhanced electrostatic binding at low ionic strength.

  7. Production of humic substances through coal-solubilizing bacteria

    PubMed Central

    Valero, Nelson; Gómez, Liliana; Pantoja, Manuel; Ramírez, Ramiro

    2014-01-01

    In this paper, the production of humic substances (HS) through the bacterial solubilization of low rank coal (LRC) was evaluated. The evaluation was carried out by 19 bacterial strains isolated in microenvironments with high contents of coal wastes. The biotransformed LRC and the HS produced were quantified in vitro in a liquid growth medium. The humic acids (HA) obtained from the most active bacterial strain were characterized via elemental composition (C, H, N, O), IR analyses, and the E4/E6 ratio; they were then compared with the HA extracted chemically using NaOH. There was LRC biotransformation ranged from 25 to 37%, and HS production ranged from 127 to 3100 mg.L−1. More activity was detected in the isolated strains of Bacillus mycoides, Microbacterium sp, Acinetobacter sp, and Enterobacter aerogenes. The HA produced by B. mycoides had an IR spectrum and an E4/E6 ratio similar to those of the HA extracted with NAOH, but their elemental composition and their degree of aromatic condensation was different. Results suggest that these bacteria can be used to exploit the LRC resulting from coal mining activities and thus produce HS in order to improve the content of humified organic matter in soils. PMID:25477925

  8. Natural carbon-based dots from humic substances

    NASA Astrophysics Data System (ADS)

    Dong, Yongqiang; Wan, Lisi; Cai, Jianhua; Fang, Qingqing; Chi, Yuwu; Chen, Guonan

    2015-05-01

    For the first time, abundant natural carbon-based dots were found and studied in humic substances (HS). Four soluble HS including three humic acids (HA) from different sources and one fulvic acids (FA) were synthetically studied. Investigation results indicate that all the four HS contain large quantities of Carbon-based dots. Carbon-based dots are mainly small-sized graphene oxide nano-sheets or oxygen-containing functional group-modified graphene nano-sheets with heights less than 1 nm and lateral sizes less than 100 nm. Carbon-based nanomaterials not only contain abundant sp2-clusters but also a large quantity of surface states, exhibiting unique optical and electric properties, such as excitation-dependent fluorescence, surface states-originated electrochemiluminescence, and strong electron paramagnetic resonance. Optical and electric properties of these natural carbon-based dots have no obvious relationship to their morphologies, but affected greatly by their surface states. Carbon-based dots in the three HS have relative high densities of surface states whereas the FA has the lowest density of surface states, resulting in their different fluorescence properties. The finding of carbon-based dots in HS provides us new insight into HS, and the unique optical properties of these natural carbon-based dots may give HS potential applications in areas such as bio-imaging, bio-medicine, sensing and optoelectronics.

  9. Humic substances-enhanced electroremediation of heavy metals contaminated soil.

    PubMed

    Bahemmat, Mahdi; Farahbakhsh, Mohsen; Kianirad, Mehran

    2016-07-15

    The effects of catholyte conditioning and the use of humic acids (HAs) and fulvic acids (FAs) as chelating agents to improve electrokinetic (EK) remediation efficiency were investigated using a real and highly contaminated soil. By applying a constant voltage (2.0V/cm) to the soil, pH and current changes and heavy metals (HMs) concentration were investigated through a range of durations and positions. The observations demonstrated that both catholyte conditioning with 0.1N HNO3 and using humic substances (HSs) enhance remediation efficiency. After 20 days of EK treatment, the removal efficiency of HMs in HS-enhanced EK remediation was about 2.0-3.0 times greater than when unenhanced. The quantity of HMs moving toward the cathode exceeded the anode, from which it could be reasonably inferred that most negatively charged HM-HS complexes were moved by electroosmotic forces. Further, free HM cations and positively charged complexed HMs migrated to the catholyte compartment by electromigration. The results obtained in this study, demonstrate the suitability of HS-enhanced EK remediation in HMs contaminated soil. PMID:27058638

  10. Natural carbon-based dots from humic substances

    PubMed Central

    Dong, Yongqiang; Wan, Lisi; Cai, Jianhua; Fang, Qingqing; Chi, Yuwu; Chen, Guonan

    2015-01-01

    For the first time, abundant natural carbon-based dots were found and studied in humic substances (HS). Four soluble HS including three humic acids (HA) from different sources and one fulvic acids (FA) were synthetically studied. Investigation results indicate that all the four HS contain large quantities of Carbon-based dots. Carbon-based dots are mainly small-sized graphene oxide nano-sheets or oxygen-containing functional group-modified graphene nano-sheets with heights less than 1 nm and lateral sizes less than 100 nm. Carbon-based nanomaterials not only contain abundant sp2-clusters but also a large quantity of surface states, exhibiting unique optical and electric properties, such as excitation-dependent fluorescence, surface states-originated electrochemiluminescence, and strong electron paramagnetic resonance. Optical and electric properties of these natural carbon-based dots have no obvious relationship to their morphologies, but affected greatly by their surface states. Carbon-based dots in the three HS have relative high densities of surface states whereas the FA has the lowest density of surface states, resulting in their different fluorescence properties. The finding of carbon-based dots in HS provides us new insight into HS, and the unique optical properties of these natural carbon-based dots may give HS potential applications in areas such as bio-imaging, bio-medicine, sensing and optoelectronics. PMID:25944302

  11. Properties and structure of raised bog peat humic acids

    NASA Astrophysics Data System (ADS)

    Klavins, Maris; Purmalis, Oskars

    2013-10-01

    Humic substances form most of the organic components of soil, peat and natural waters, and their structure and properties differ very much depending on their source. The aims of this study are to characterize humic acids (HAs) from raised bog peat, to evaluate the homogeneity of peat HAs within peat profiles, and to study peat humification impact on properties of HAs. A major impact on the structure of peat HAs have lignin-free raised bog biota (dominantly represented by bryophytes of different origin). On diagenesis scale, peat HAs have an intermediate position between the living organic matter and coal organic matter, and their structure is formed in a process in which more labile structures (carbohydrates, amino acids, etc.) are destroyed, while thermodynamically more stable aromatic and polyaromatic structures emerge as a result of abiotic synthesis. However, in comparison with soil, aquatic and other HAs, aromaticity of peat HAs is much lower. Comparatively, the raised bog peat HAs are at the beginning of the transformation process of living organic matter. Concentrations of carboxyl and phenolic hydroxyl groups change depending on the peat age and decomposition degree from where HAs have been isolated, and carboxylic acidity of peat HAs increases with peat depth and humification degree.

  12. Electrocoagulation treatment of peat bog drainage water containing humic substances.

    PubMed

    Kuokkanen, V; Kuokkanen, T; Rämö, J; Lassi, U

    2015-08-01

    Electrocoagulation (EC) treatment of 100 mg/L synthetic wastewater (SWW) containing humic acids was optimized (achieving 90% CODMn and 80% DOC removal efficiencies), after which real peat bog drainage waters (PBDWs) from three northern Finnish peat bogs were also treated. High pollutant removal efficiencies were achieved: Ptot, TS, and color could be removed completely, while Ntot, CODMn, and DOC/TOC removal efficiencies were in the range of 33-41%, 75-90%, and 62-75%, respectively. Al and Fe performed similarly as the anode material. Large scale experiments (1 m(3)) using cold (T = 10-11 °C) PBDWs were also conducted successfully, with optimal treatment times of 60-120 min (applying current densities of 60-75 A/m(2)). Residual values of Al and Fe (complete removal) were lower than their initial values in the EC-treated PBDWs. Electricity consumption and operational costs in optimum conditions were found to be low and similar for all the waters studied: 0.94 kWh/m(3) and 0.15 €/m(3) for SWW and 0.35-0.70 kWh/m(3) and 0.06-0.12 €/m(3) for the PBDWs (large-scale). Thus, e.g. solar cells could be considered as a power source for this EC application. In conclusion, EC treatment of PBDW containing humic substances was shown to be feasible. PMID:25973580

  13. Nitric oxide production inhibition and mechanism of phenanthrene analogs in lipopolysaccharide-stimulated RAW264.7 macrophages.

    PubMed

    Chen, Lian-Qi; Shen, Xiao-Fei; Hu, Bo-Yang; Lin, Yuan; Igbe, Ighodaro; Zhang, Cheng-Gang; Zhang, Guo-Lin; Yuan, Xiao-Hong; Wang, Fei

    2016-05-15

    Natural phenanthrene derivatives are considered to be important resource for the anti-inflammatory therapeutics, but their structure-activity relationship and mechanisms are still unknown. In this study we evaluated 20 synthesized phenanthrene analogs in lipopolysaccharide (LPS)-stimulated RAW264.7 macrophages. Compounds 10, 11 and 17 were found to inhibit the production of nitric oxide (NO) with IC50 values of 37.26μM, 5.05μM and 20.31μM, respectively. Compound 11 decreased LPS-induced expression of inducible NO synthase (iNOS), inhibited phosphorylation of p38 mitogen-activated protein kinase (MAPK) and serine/threonine kinase Akt. It also suppressed the phosphorylation and degradation of inhibitory kappa B-α (IκBα). Data obtained suggest that compound 11 exerts anti-inflammatory effects by inhibiting p38 MAPK and nuclear factor κB (NF-κB) pathways, which warrants further investigation as a new anti-inflammatory pharmaceutical tool. PMID:27038497

  14. Effect of model dissolved organic matter coating on sorption of phenanthrene by TiO2 nanoparticles.

    PubMed

    Wang, Xilong; Ma, Enxing; Shen, Xiaofang; Guo, Xiaoying; Zhang, Meng; Zhang, Haiyun; Liu, Ye; Cai, Fei; Tao, Shu; Xing, Baoshan

    2014-11-01

    Dissolved organic matter (DOM) may alter the sorption of hydrophobic organic contaminants (HOC) to metal oxide nanoparticles (NPs), but the role of DOM and NP types is poorly understood. Here, phenanthrene sorption was quantified on four types of nano-TiO2 (three rutile, one anatase), and a bulk, raw TiO2 powder. Prior to the sorption experiments, these nanoparticles were coated using four different organic materials: Lignin (LIG), tannic acid (TAN), Congo red (CON), and capsorubin (CAP). Lignin, tannic acid, congo red and capsorubin coating substantially enhanced phenanthrene sorption to various TiO2 particles. After coating with a specific DOM, Kd values by the DOM-coated TiO2 particles on percent organic carbon content and surface area (SA) basis (Koc/SA) generally followed the order: TiO2 NPs with hydrophobic surfaces > bulk TiO2 particles > other TiO2 NPs. Different Koc/SA values of various DOM-TiO2 complexes resulted from distinct conformation of the coated DOM and aggregation. PMID:25089890

  15. Acute phenanthrene toxicity to juvenile diploid and triploid African catfish (Clarias gariepinus): Molecular, biochemical, and histopathological alterations.

    PubMed

    Karami, Ali; Romano, Nicholas; Hamzah, Hazilawati; Simpson, Stuart L; Yap, Chee Kong

    2016-05-01

    Information on the biological responses of polyploid animals towards environmental contaminants is scarce. This study aimed to compare reproductive axis-related gene expressions in the brain, plasma biochemical responses, and the liver and gill histopathological alterations in diploid and triploid full-sibling juvenile African catfish (Clarias gariepinus). Fish were exposed for 96 h to one of the two waterborne phenanthrene (Phe) concentrations [mean measured (SD): 6.2 (2.4) and 76 (4.2) μg/L]. In triploids, exposure to 76 μg/L Phe increased mRNA level of fushi tarazu-factor 1 (ftz-f1). Expression of tryptophan hydroxylase2 (tph2) was also elevated in both ploidies following the exposure to 76 μg/L Phe compared to the solvent control. In triploids, 76 μg/L Phe increased plasma alkaline phosphatase (ALP) and lactate dehydrogenase (LDH) levels compared to the other Phe-exposed group. It also elevated lactate and glucose contents relative to the other groups. In diploids, however, biochemical biomarkers did not change. Phenanthrene exposures elevated glycogen contents and the prevalence of histopathological lesions in the liver and gills of both ploidies. This study showed substantial differences between diploids and triploids on biochemical and molecular biomarker responses, but similar histopathological alterations following acute Phe exposures. PMID:26845363

  16. Atmospheric oxidation of phenanthrene initiated by OH radicals in the presence of O2 and NOx - A theoretical study.

    PubMed

    Zhao, Nan; Zhang, Qingzhu; Wang, Wenxing

    2016-09-01

    Phenanthrene (Phe) is one of the most abundant polycyclic aromatic hydrocarbons (PAHs) observed in polluted urban atmosphere. The most important atmospheric loss process of Phe is the reaction with OH radicals. The present work investigated OH radical-initiated atmospheric degradation of Phe in the presence of O2 and NOx. The possible reaction mechanism was elucidated by density functional theory (DFT) calculations. Calculations show that the main products are a series of ring-retaining and ring-opening oxygenated PAHs containing phenanthrol, phenanthones, phenanthrenequinone, and dialdehydes. Rice-Ramsperger-Kassel-Marcus (RRKM) theory was employed to evaluate the rate constants for the initial steps of Phe with OH. The atmospheric lifetime of Phe relative to gas-phase reactions with OH is estimated to be 4.6h, based on the calculated overall rate constant of 3.02×10(-11)cm(3) molecule(-1)s(-1) at 298K and 1atm. Combined with available experimental data, this work also provides a comprehensive investigation of the formation mechanism of oxygenated PAHs in the atmospheric oxidation process of phenanthrene and should help to clarify its potential health risk. PMID:27169729

  17. The effect of structural compositions on the biosorption of phenanthrene and pyrene by tea leaf residue fractions as model biosorbents.

    PubMed

    Xi, Zemin; Chen, Baoliang

    2014-03-01

    To enhance the removal efficiency of polycyclic aromatic hydrocarbons (PAHs) by natural biosorbent, sorption of phenanthrene and pyrene onto raw and modified tea leaves as a model biomass were investigated. Tea leaves were treated using Soxhlet extraction, saponification, and acid hydrolysis to yield six fractions. The structures of tea leaf fractions were characterized by elemental analysis, Fourier transform infrared (FTIR) spectroscopy, and scanning electron microscopy (SEM). The amorphous cellulose components regulated the sorption kinetics, capacity, and mechanism of biomass fractions. The adsorption kinetics fit well to pseudo-second-order model and isotherms followed the Freundlich equation. By the consumption of the amorphous cellulose under acid hydrolysis, both the aliphatic moieties and aromatic domains contributed to total sorption, thus sorption capacities of the de-sugared fractions were dramatically increased (5–20-fold for phenanthrene and 8–36-fold for pyrene). All de-sugared fractions exhibited non-linear sorption due to strong specific interaction between PAHs and exposed aromatic domains of biosorbent, while presenting a relative slow rate because of the condensed domain in de-sugared samples. The availability of strong sorption phases (aromatic domains) in the biomass fractions were controlled by polar polysaccharide components, which were supported by the FTIR, CHN, and SEM data. PMID:24234757

  18. Nonionic surfactants induced changes in cell characteristics and phenanthrene degradation ability of Sphingomonas sp. GY2B.

    PubMed

    Liu, Shasha; Guo, Chuling; Liang, Xujun; Wu, Fengji; Dang, Zhi

    2016-07-01

    Surfactant-mediated bioremediation has been widely applied in decontaminating PAH-polluted sites. However, the impacts of surfactants on the biodegradation of PAHs have been controversial in the past years. To gain a clear insight into the influencing mechanisms, three nonionic surfactants (Tween80, TritonX-100 and Brij30) were selected to systematically investigate their effects on cell surface properties (membrane permeability, functional groups and elements), cell vitality as well as subsequent phenanthrene degradation ability of Sphingomonas sp. GY2B. Results showed that biodegradation of phenanthrene was stimulated by Tween80, slightly inhibited by TritonX-100 and severely inhibited by Brij30, respectively. Positive effect of Tween80 may arise from its role as the additional carbon source for GY2B to increase bacterial growth and activity, as demonstrated by the increasing viable cells in Tween80 amended degradation systems determined by flow cytometry. Although TritonX-100 could inhibit bacterial growth and disrupt cell membrane, its adverse impacts on microbial cells were weaker than Brij30, which may result in its weaker inhibitive extent. Results from this study can provide a rational basis on selecting surfactants for enhancing bioremediation of PAHs. PMID:27045921

  19. Accumulation of phenanthrene by roots of intact wheat (Triticum acstivnm L.) seedlings: passive or active uptake?

    PubMed Central

    2010-01-01

    Background Polycyclic aromatic hydrocarbons (PAHs) are of particular concern due to their hydrophobic, recalcitrant, persistent, potentially carcinogenic, mutagenic and toxic properties, and their ubiquitous occurrence in the environment. Most of the PAHs in the environment are present in surface soil. Plants grown in PAH-contaminated soils or water can become contaminated with PAHs because of their uptake. Therefore, they may threaten human and animal health. However, the mechanism for PAHs uptake by crop roots is little understood. It is important to understand exactly how PAHs are transported into the plant root system and into the human food chain, since it is beneficial in governing crop contamination by PAHs, remedying soils or waters polluted by PAHs with plants, and modeling potential uptake for risk assessment. Results The possibility that plant roots may take up phenanthrene (PHE), a representative of PAHs, via active process was investigated using intact wheat (Triticum acstivnm L.) seedlings in a series of hydroponic experiments. The time course for PHE uptake into wheat roots grown in Hoagland solution containing 5.62 μM PHE for 36 h could be separated into two periods: a fast uptake process during the initial 2 h and a slow uptake component thereafter. Concentration-dependent PHE uptake was characterized by a smooth, saturable curve with an apparent Km of 23.7 μM and a Vmax of 208 nmol g-1 fresh weight h-1, suggesting a carrier-mediated uptake system. Competition between PHE and naphthalene for their uptake by the roots further supported the carrier-mediated uptake system. Low temperature and 2,4-dinitrophenol (DNP) could inhibit PHE uptake equally, indicating that metabolism plays a role in PHE uptake. The inhibitions by low temperature and DNP were strengthened with increasing concentration of PHE in external solution within PHE water solubility (7.3 μM). The contribution of active uptake to total absorption was almost 40% within PHE water

  20. Bioavailability of phenanthrene in the presence of birnessite-mediated catechol polymers.

    PubMed

    Russo, Fabio; Rao, Maria A; Gianfreda, Liliana

    2005-07-01

    Polycyclic aromatic hydrocarbons (PAHs) are widespread environmental contaminants and contribute to the pollution of aquatic and terrestrial environments. In soil, their fate may be affected by interactions with the soil biological community and soil colloids. This study was conducted to investigate the fate of phenanthrene (Phe), selected as a representative PAH, in simplified model systems, which simulate processes naturally occurring in soil. Phe was interacted with catechol (Cat), an orthodiphenol, and common intermediate in the microbial degradation of PAHs, and birnessite (Bir), an abiotic strong oxidative catalyst abundant in soil. Two experimental conditions were investigated: Cat (5 mM)+Bir (1 mg ml(-1))+Phe (0.05 mg ml(-1)) mixed at the same time and incubated for 24 h at 25 degrees C (Cat-Bir-Phe) and Cat+Bir incubated for 24 h at 25 degrees C before Phe addition and then incubated for a further 24 h (Cat-Bir+Phe). After incubation, the systems were analysed for residual Cat and Phe, supplied with a selected Phe-degrading mixed bacterial culture, and then the microbial degradation of Phe and the growth of cells were monitored. Complex phenomena simultaneously occurred. Cat was completely removed after a 24-h incubation with Bir, and no interference by Phe in the Bir-mediated transformation of Cat was observed. Elemental analysis and UV-Vis and Fourier transfer infrared spectra showed that Cat transformation by Bir produced soluble and insoluble polymeric aggregates involving Phe. The hydrocarbon also interacted with the surfaces of Bir either previously coated (Cat-Bir+Phe sample) or not by Cat polymers. When a Phe-degrading bacterial culture was added to the systems after Bir-mediated Cat polymerisation, a different behaviour was observed in terms of Phe consumption and bacterial growth, thus suggesting differentiated availability of Phe to the microbial cells. The hydrocarbon was completely transformed in the presence of Bir and/or Bir covered by Cat

  1. Oxidation of humic substances supports denitrification reactions in agricultural soils.

    NASA Astrophysics Data System (ADS)

    van Trump, J. I.; Coates, J. D.

    2007-12-01

    Humic substances (HS) are a ubiquitous, recalcitrant, and diverse class of compounds arising from degradation and condensation of plant and microbial biopolymers. Many bacteria oxidize hydroquinones within humic substances to their quinone analogs, providing electrons for respiratory processes such as nitrate reduction. Microbial hydroquinone oxidation contributes to the redox state of HS and supports denitrification, which may be of import to agricultural soils where nitrate retention is critical and HS are prevalent. Most probable number counts were performed on soils collected from a Nebraska farm, with the model humic hydroquinone 2,6- anthrahydroquinone disulfonate (AHDS) serving as an electron donor and nitrate as the electron acceptor. Results indicated that AHDS oxidizing, nitrate reducing bacteria were present in soils from bluegrass fields (104 cells/g) and aspen groves (106 cells/g), as well as in plots of corn (106 cells/g), and soybean treated (106 cells/g) and un-treated (105 cells/g) with pig slurry. These results demonstrate that microorganisms participating in the proposed metabolism are prevalent within agricultural soils. Upflow glass columns were constructed, containing a support matrix of glass beads amended with 10% w/w soil from the corn plot previously mentioned. All columns were subjected to a continual flow of phosphate-buffered water amended with sodium nitrate. Above the point source for nitrate injection, phosphate-buffered water containing electron donor treatments were continually injected. The impacts of electron donor treatments (no donor, oxidized HS, reduced HS, and acetate) on denitrification and other geochemical parameters were observed. Column studies were able to resolve effects of electron donor treatment both spatially as a function of distance from the injection point source, and temporally, as a function of time of donor treatment. Four sample ports in each column were routinely analyzed for concentrations of nitrate

  2. Effects of peat fires on the characteristics of humic acid extracted from peat soil in Central Kalimantan, Indonesia.

    PubMed

    Yustiawati; Kihara, Yusuke; Sazawa, Kazuto; Kuramitz, Hideki; Kurasaki, Masaaki; Saito, Takeshi; Hosokawa, Toshiyuki; Syawal, M Suhaemi; Wulandari, Linda; Hendri I; Tanaka, Shunitz

    2015-02-01

    When peat forest fires happen, it leads to burn soil and also humic acids as a dominant organic matter contained in peat soil as well as the forest. The structure and properties of humic acids vary depending on their origin and environment, therefore the transformation of humic acid is also diverse. The impacts of the peat fires on peat soil from Central Kalimantan, Indonesia were investigated through the characterization of humic acids, extracted from soil in burnt and unburnt sites. The characterization of humic acids was performed by elemental composition, functional groups, molecular weight by HPSEC, pyrolysate compounds by pyrolysis-GC/MS, fluorescence spectrum by 3DEEM spectrofluorometer, and thermogravimetry. The elemental composition of each humic substance indicated that the value of H/C and O/C of humic acids from burnt sites were lower than that from unburnt sites. The molecular weight of humic acids from burnt sites was also lower than that from unburnt sites. Pyrolysate compounds of humic acids from unburnt sites differed from those of humic acids from burnt soil. The heating experiment showed that burning process caused the significant change in the properties of humic acids such as increasing the aromaticity and decreasing the molecular weight. PMID:24781330

  3. Peat humic acids and their complex forming properties as influenced by peat humification

    NASA Astrophysics Data System (ADS)

    Dudare, D.; Klavins, M.

    2012-04-01

    To study paleoenvironmental changes of importance is understanding of processes of organic matter diagenesis, especially changes of refractory part of natural organic substances - humic substances. Studies of the living organic matter humification process are also essential for understanding of the carbon biogeochemical cycle. The aim of this study was to analyze peat organic matter diagenesis: changes of properties of humic acids, relations between the humification process, properties of peat, peat humic acids, their ability to interact with metal ions, as well ability to accumulate metals. The analysis were carried out on samples of humic substances preparatively extracted from three ombrotrophic bog peat profiles to identify the links between peat age, decomposition and humification degree, botanical composition and properties of peat humic acids elemental (C, H, N, O), functional (-COOH, -OH) composition, structural characteristics - UV, fluorescence, FTIR. The found variability of peat properties is less significant than differences in the properties of peat-forming living matter, thus revealing the dominant impact of humification process on the properties of peat. Correspondingly, composition of peat humic acids is little affected by differences in the properties of precursor living organic material, and such indicators as decomposition degree, humification degree, humic acid elemental ratio and concentrations of acidic functional groups are the best descriptors of changes in organic matter during the process of organic matter diagenesis and humification. Peat ability to accumulate major and trace elements depends on the character of element supply, potency of metal ions to bind functionalities in the peat, with an emphasis on the structure of peat humic acid, pH reaction, oxygen presence, presence of complexing compounds, inorganic ions and many other factors. Major and trace element presence in peat is of importance as an indicator of peat genesis and

  4. Effects of aluminum-induced aggregation on the fluorescence of humic substances

    SciTech Connect

    Sharpless, C.M.; McGown, L.B.

    1999-09-15

    Aluminum-induced aggregates of terrestrial and aquatic humic acid standards from the International Humic Substances Society are shown to be fluorescent by means of a multiwavelength fluorescence anisotropy experiment in which the data were treated with a model for nonspherical particles. While aggregates of aquatic humic acids appear in the fluorescence signal at both short and long excitation wavelengths, aggregates of terrestrial humic acids are detected only at the long Wavelength. Furthermore, the results indicate that emission obtained at longer excitation wavelengths is representative of smaller particles. At pH 4, the aquatic humic acids appear to exist in an extended conformation, whereas the terrestrial humic acids show less extension. The size and shape of the fluorescent particles display a complex dependence on Al concentration. Both enhancement and quenching of fluorescence are observed in the total luminescence spectra upon Al addition. However, quenching is shown to be the result of decreased humic acid concentration due to precipitation by Al rather than photophysical processes.

  5. Effect of soil invertebrates on the formation of humic substances under laboratory conditions

    NASA Astrophysics Data System (ADS)

    Frouz, J.; Li, X.; Brune, A.; Pizl, V.; Abakumov, E. V.

    2011-08-01

    The complete polymerization of phenols and proteins (one of the processes involved in the formation of humic substances) was explained. It was shown that fly ( Bibio marci) larvae and earthworms ( Aporrectodea caliginosa) participate in the complete polymerization of phenols and proteins. In a laboratory experiment, invertebrates participated in the degradation of organic matter and the synthesis of humic substances, which was proved in experiments with 14C-labeled phenols and proteins. The same organic substances (phenols and proteins) without the impact of invertebrates were used as the control substances. The distributions of the 14C isotope in alkaline extracts separated by solubility in acids (humic and fulvic acids) was compared to those of the control substances. The portion of the 14C isotope in the humic acids in the excrements of Bibio marci was higher than that in the control substances. The content of 14C-labeled humic substances in the excrements of the earthworm Aporrectodea caliginosa exceeded the control values only in the experiment with proteins. When clay material was added to the organic substances, the portion of the 14C isotope in the humic acids increased in both experiments with phenols and proteins. When these substrates passed through the digestive tracts of the invertebrates, the polymerization of organic substances and the inclusion of proteins and phenols into humic acids occurred.

  6. Enrichment of humic material with hydroxybenzene moieties intensifies its physiological effects on the nematode Caenorhabditis elegans.

    PubMed

    Menzel, Ralph; Menzel, Stefanie; Tiedt, Sophie; Kubsch, Georg; Stösser, Reinhardt; Bährs, Hanno; Putschew, Anke; Saul, Nadine; Steinberg, Christian E W

    2011-10-15

    Dissolved humic substances are taken up by organisms and interact on various molecular and biochemical levels. In the nematode Caenorhabditis elegans, such material can promote longevity and increase its reproductive capacity; moreover, the worms tend to stay for longer in humic-enriched environments. Here, we tested the hypothesis that the chemical enrichment of humic substances with hydroxybenzene moieties intensifies these physiological effects. Based on the leonardite humic acid HuminFeed (HF), we followed a polycondensation reaction in which this natural humic substance and a dihydroxybenzene (hydroquinone or benzoquinone) served as reaction partners. Several analytical methods showed the formation of the corresponding copolymers. The chemical modification boosted the antioxidant properties of HF both in vitro and in vivo. Humic substances enriched with hydroxybenzene moieties caused a significantly increased tolerance to thermal stress in C. elegans and extended its lifespan. Exposed nematodes showed delayed linear growth and onset of reproduction and a stronger pumping activity of the pharynx. Thus, treated nematodes act younger than they really are. In this feature the modified HF replicated the biological impact of hydroquinone-homopolymers and various plant polyphenol monomers, thereby supporting the hydroxybenzene moieties of humic substances as major effective structures for the physiological effects observed in C. elegans. PMID:21902274

  7. Pyrolysis GC-MS and NMR studies of humics in contaminated sediments

    SciTech Connect

    Higashi, R.M.; Fan, T.W.M.; Lane, A.N.

    1994-12-31

    Sediment ``humics`` play a major role in sorption and chemical reactions of organic and metal pollutants, as well as of nutrients, detritus, and other naturally-occurring chemicals. Not surprisingly, the chemical structure of humics is very important in this regard. The problem is, humics are among the most complex and least-understood substances in the world. This is because the primary structure is heterologous, unlike most other macromolecules which are polymeric; thus, researchers could not obtain coherent structures to identify with properties. However, recent advances in NMR spectroscopy and pyrolysis GC-MS have enabled researchers to begin relating primary and higher order structural motifs germane to the chemistry of the refractory humics. The authors have explored various means of sediment extraction for humics analysis by these techniques, including direct analysis of unextracted sediments. Marine sediments from near produced water discharges, salt marshes, and dredge material were surveyed. The study has revealed interpretive pitfalls, depending on the method of humic extraction. These difficulties are expected since the approach is at its infancy, but the overall approach is clearly useful in probing the humic structure profile of marine sediments.

  8. Character of Humic Substances as a Predictor for Goethite Nanoparticle Reactivity and Aggregation.

    PubMed

    Vindedahl, Amanda M; Stemig, Melissa S; Arnold, William A; Penn, R Lee

    2016-02-01

    Natural organic matter (NOM) is ubiquitous in surface water and groundwater and interacts strongly with mineral surfaces. The details of these interactions, as well as their impacts on mineral surface reactivity, are not well understood. In this work, both the reactivity and aggregation of goethite (α-FeOOH) nanoparticles were quantified in the presence of well-characterized humic substances. Results from monitoring the kinetics of reductive degradation of 4-chloronitrobenzene (4-ClNB) by Fe(II) adsorbed onto the goethite nanoparticles with and without added humic substances demonstrates that, in all cases, humic substances suppressed Fe(II)-goethite reactivity. The ranking of the standards from the least to most inhibitive was Pahokee Peat humic acid, Elliot Soil humic acid, Suwannee River humic acid, Suwannee River NOM, Suwannee River fulvic acid I, Suwannee River fulvic acid II, and Pahokee Peat fulvic acid. Correlations between eight characteristics (molecular weight, carboxyl concentration, and carbon, oxygen, nitrogen, aliphatic, heteroaliphatic, and aromatic content) and 4-ClNB degradation rate constants were observed. Faster kinetic rates of reductive degradation were observed with increased molecular weight and nitrogen, carbon, and aromatic content, and slower rates were observed with increased carboxyl concentration and oxygen, heteroaliphatic, and aliphatic content. With these correlations, improved predictions of the reactivity of Fe(II)-goethite with pollutants based on properties of the humic substances are possible. PMID:26790005

  9. Changes in humic acid conformation during coagulation with ferric chloride: implications for drinking water treatment.

    PubMed

    Siéliéchi, J-M; Lartiges, B S; Kayem, G J; Hupont, S; Frochot, C; Thieme, J; Ghanbaja, J; d'Espinose de la Caillerie, J B; Barrès, O; Kamga, R; Levitz, P; Michot, L J

    2008-04-01

    Electrophoretic mobility, pyrene fluorescence, surface tension measurements, transmission electron microscopy on resin-embedded samples, and X-ray microscopy (XRM) were combined to characterize the aggregates formed from humic colloids and hydrolyzed-Fe species under various conditions of pH and mixing. We show that, at low coagulant concentration, the anionic humic network is reorganized upon association with cationic coagulant species to yield more compact structures. In particular, spheroids about 80nm in size are evidenced by XRM at pH 6 and 8 just below the optimal coagulant concentration. Such reorganization of humic colloids does not yield surface-active species, and maintains negative functional groups on the outside of humic/hydrolyzed-Fe complex. We also observe that the humic network remains unaffected by the association with coagulant species up to the restabilization concentration. Upon increasing the coagulant concentration, restructuration becomes limited: indeed, the aggregation of humic acid with hydrolyzed-Fe species can be ascribed to a competition between humic network reconformation rate and collision rate of destabilized colloids. A decrease in stirring favors the shrinkage of humic/hydrolyzed-Fe complexes, which then yields a lower sediment volume. Elemental analyses also reveal that the iron coagulant species are poorly hydrolyzed in the destabilization range. This suggests that destabilization mechanisms such as sweep flocculation or adsorption onto a hydroxyde precipitate are not relevant to our case. A neutralization/complexation destabilization mechanism accompanied by a restructuration of flexible humic network is then proposed to occur in the range of pHs investigated. PMID:18155268

  10. Nonreversible immobilization of water-borne plutonium onto self-assembled adlayers of silanized humic materials.

    PubMed

    Shcherbina, Natalia S; Kalmykov, Stepan S; Karpiouk, Leonid A; Ponomarenko, Sergey A; Hatfield, Kirk; Haire, Richard; Perminova, Irina V

    2014-02-18

    The objective was to study plutonium partitioning between immobile and mobile humic materials at the water-solid interfaces. Immobilization of the humic materials on solid supports was performed in situ using self-adhesive silanized humic derivatives. The presence of the humic adlayers on solid supports was shown to significantly enhance Pu sorption and its retention under both steady state and dynamic conditions. While plutonium may exist in multiple oxidations states plus colloidal forms, the major thrust in this work was to study the behavior of most mobile--the PuO2(+) form in dilute solutions. The values of the plutonium partition coefficients (Kd) between water and humics-coated silica gels after 10 days exposure reached 1.6 × 10(4) L · kg(-1) at pH 7.5 under anaerobic conditions with a total plutonium concentration of 1.2 × 10(-8) M exceeding those for the uncoated SiO2 (6.3 × 10(2) L · kg(-1)). Column tests showed substantial sequestration of water-borne plutonium (up to 73%) on the humics-coated silica gels. Remobilization experiments conducted under batch conditions at different pH values (3.5, 4.5, 7.5) showed that no more than 3% of the sequestered Pu was remobilized from the humics-coated silica gels by treatment with dissolved humic materials at environmentally relevant pH of 7.5. Consequently, silanized humic materialas can be seen as both molecular probes and as potent candidate materials for scavenging mobile Pu from an aqueous phase. PMID:24533599

  11. Effects of heating on composition, degree of darkness, and stacking nanostructure of soil humic acids.

    PubMed

    Katsumi, Naoya; Yonebayashi, Koyo; Okazaki, Masanori

    2016-01-15

    Wildfires and prescribed burning can affect both the quality and the quantity of organic matter in soils. In this study, we investigated qualitative and quantitative changes of soil humic substances in two different soils (an Entisol from a paddy field and an Inceptisol from a cedar forest) under several controlled heating conditions. Soil samples were heated in a muffle furnace at 200, 250, or 300 °C for 1, 3, 5, or 12h. The humic acid and fulvic acid contents of the soil samples prior to and after heating were determined. The degree of darkness, elemental composition, carbon and nitrogen stable isotope ratios, (13)C nuclear magnetic resonance spectra, and X-ray diffraction patterns of humic acids extracted from the soils before and after heating were measured. The proportion of humic acids in total carbon decreased with increasing heating time at high temperature (300 °C), but increased with increasing heating time at ≤ 250 °C. The degree of darkness of the humic acids increased with increasing heating time and temperature. During darkening, the H/C atomic ratios, the proportion of aromatic C, and the carbon and nitrogen stable isotope ratios increased, whereas the proportions of alkyl C and O-alkyl C decreased. X-ray diffraction analysis verified that a stacking nanostructure developed by heating. Changes in the chemical structure of the humic acids from the heated soils depended on the type of soil. The major structural components of the humic acids from the heated Entisol were aromatic C and carboxylic C, whereas aliphatic C, aromatic C, and carboxylic C structural components were found in the humic acids from the heated Inceptisol. These results suggest that the heat-induced changes in the chemical structure of the humic acids depended on the source plant. PMID:26398447

  12. Properties and structure of peat humic acids depending on humification and precursor biota in bogs

    NASA Astrophysics Data System (ADS)

    Klavins, Maris; Purmalis, Oskars

    2013-04-01

    Humic substances form most of the organic component of soil, peat and natural waters, but their structure and properties very much differs depending on their source. The aim of this study is to characterize humic acids from raised bog peat profiles to evaluate the homogeneity of humic acids isolated from the bog bodies and study peat humification impact on properties of humic acids. A major impact on the structure of peat humic acids have raised bog biota (dominantly represented by bryophytes of different origin) void of lignin. For characterization of peat humic acids their elemental (CHNOS), functional (-COOH, phenolic OH) analysis, spectroscopic characterization (UV, fluorescence, FTIR, 1H NMR, CP/MAS 13C NMR, ESR) and degradation studies (Py-GC/MS) were done. Peat humic acids (HA) have an intermediate position between the living organic matter and coal organic matter and their structure is formed in a process in which more labile structures (carbohydrates, amino acids, etc.) are destroyed, but thermodynamically more stable aromatic and polyaromatic structures emerge. Comparatively, the studied peat HAs are at the start of the transformation process of living organic matter. Concentrations of carboxyl and phenolic hydroxyl groups changes depending on the depth of peat from which HAs have been isolated: and carboxylic acidity is increasing with depth of peat location and the humification degree. The ability to influence the surface tension of peat humic acids isolated from a well-characterized bog profile demonstrates dependence on age and humification degree. With increase of the humification degree and age of humic acids, their molecular complexity and ability to influence surface tension decreases; even so, the impact of the biological precursor (peat-forming bryophytes and plants) can be identified.

  13. Expeditious synthesis of phenanthrenes via CuBr2-catalyzed coupling of terminal alkynes and N-tosylhydrazones derived from o-formyl biphenyls.

    PubMed

    Ye, Fei; Shi, Yi; Zhou, Lei; Xiao, Qing; Zhang, Yan; Wang, Jianbo

    2011-10-01

    A new method for the synthesis of phenanthrenes via ligand-free CuBr(2)-catalyzed coupling/cyclization of terminal alkynes with N-tosylhydrazones derived from o-formyl biphenyls has been developed. This new synthesis has wide range of functional group compatibility. PMID:21875127

  14. Moderate salinity reduced phenanthrene-induced stress in the halophyte plant model Thellungiella salsuginea compared to its glycophyte relative Arabidopsis thaliana: Cross talk and metabolite profiling.

    PubMed

    Shiri, Moez; Rabhi, Mokded; Abdelly, Chedly; Bouchereau, Alain; El Amrani, Abdelhak

    2016-07-01

    It was shown that halophytes experience higher cross-tolerance to stresses than glycophytes, which was often associated with their more powerful antioxidant systems. Moreover, salinity was reported to enhance halophyte tolerance to several stresses. The aim of the present work was to investigate whether a moderate salinity enhances phenanthrene stress tolerance in the halophyte Thellungiella salsuginea. The model plant Arabidopsis thaliana, considered as its glycophyte relative, was used as reference. Our study was based on morpho-physiological, antioxidant, and metabolomic parameters. Results showed that T. salsuginea was more tolerant to phenanthrene stress as compared to A. thaliana. An improvement of phenanthrene-induced responses was recorded in the two plants in the presence of 25 mM NaCl, but the effect was significantly more obvious in the halophyte. This observation was particularly related to the higher antioxidant activities and the induction of more adapted metabolism in the halophyte. Gas Chromatography coupled with Mass Spectrometry (GC-MS) was used to quantify alcohols, ammonium, sugars, and organic acids. It showed the accumulation of several metabolites, many of them are known to be involved in signaling and abiotic stress tolerance. Moderate salinity and phenanthrene cross-tolerance involved in these two stresses was discussed. PMID:27139124

  15. Neutralization of the antimicrobial effect of glyphosate by humic acid in vitro.

    PubMed

    Shehata, Awad A; Kühnert, Manfred; Haufe, Svent; Krüger, Monika

    2014-06-01

    In the present study, the neutralization ability of the antimicrobial effect of glyphosate by different humic acids was investigated. The minimal inhibitory concentrations of glyphosate for different bacteria such as Bacillus badius, Bifidobacterium adolescentis, Escherichia coli, E. coli 1917 strain Nissle, Enterococcus faecalis, Enterococcus faecium, Salmonella enteritidis and Salmonella typhimurium were determined in the presence or absence of different concentrations of humic acid (0.25, 0.5 and 1.0 mg mL(-1)). Our findings indicated that humic acids inhibited the antimicrobial effect of glyphosate on different bacteria. This information can help overcome the negative impact of glyphosate residues in feed and water. PMID:24268342

  16. Pyrolysis-mass spectrometry/pattern recognition on a well-characterized suite of humic samples

    USGS Publications Warehouse

    MacCarthy, P.; DeLuca, S.J.; Voorhees, K.J.; Malcolm, R.L.; Thurman, E.M.

    1985-01-01

    A suite of well-characterized humic and fulvic acids of freshwater, soil and plant origin was subjected to pyrolysis-mass spectrometry and the resulting data were analyzed by pattern recognition and factor analysis. A factor analysis plot of the data shows that the humic acids and fulvic acids can be segregated into two distinct classes. Carbohydrate and phenolic components are more pronounced in the pyrolysis products of the fulvic acids, and saturated and unsaturated hydrocarbons contribute more to the humic acid pyrolysis products. A second factor analysis plot shows a separation which appears to be based primarily on whether the samples are of aquatic or soil origin. ?? 1985.

  17. Bio-liquefaction/solubilization of lignitic humic acids by white-rot fungus (Phanerochaete chrysosporium)

    SciTech Connect

    Elbeyli, I.Y.; Palantoken, A.; Piskin, S.; Peksel, A.; Kuzu, H.

    2006-08-15

    Humic acid samples obtained from lignite were liquefied/solubilized by using white-rot fungus, and chemical characterization of the products was investigated by FTIR and GC-MS techniques. Prior to the microbial treatment, raw lignite was oxidized with hydrogen peroxide and nitric acid separately, and then humic acids were extracted by alkali solution. The prepared humic acid samples were placed on the agar surface of the fungus and liquid products formed by microbial affects were collected. The products were analyzed and the chemical properties were compared. The results show that oxidation agent and oxidation degree affect composition of the liquid products formed by microbial attack.

  18. Stabilization of polynuclear plutonium(IV) species by humic acid

    NASA Astrophysics Data System (ADS)

    Marsac, Rémi; Banik, Nidhu Lal; Marquardt, Christian Michael; Kratz, Jens Volker

    2014-04-01

    Although the formation of tetravalent plutonium (Pu(IV)) polymers with natural organic matter was previously observed by spectroscopy, there is no quantitative evidence of such reaction in batch experiments. In the present study, Pu(IV) interaction with humic acid (HA) was investigated at pH 1.8, 2.5 and 3, as a function of HA concentration and for Pu total concentration equal to 6 × 10-8 M. The finally measured Pu(IV) concentrations ([Pu(IV)]eq) are below Pu(IV) solubility limit. Pu(IV)-HA interaction can be explained by the complexation of Pu(IV) monomers by HA up to [Pu(IV)]eq ∼ 10-8 M. However, the slope of the log-log Pu(IV)-HA binding isotherm changes from ∼0.7 to ∼3.5 for higher [Pu(IV)]eq than ∼10-8 M and at any pH. This result suggests the stabilization of hydrolyzed polymeric Pu(IV) species by HA, with a 4:1 Pu:HA stoichiometry. This confirms, for the first time, previous observations made by spectroscopy in concentrated systems. The humic-ion binding model, Model VII, was introduced into the geochemical speciation program PHREEQC and was used to simulate Pu(IV) monomers binding to HA. The simulations are consistent with other tetravalent actinides-HA binding data from literature. The stabilization of a Pu tetramer (Pu4(OH)88+) by HA was proposed to illustrate the present experimental results for [Pu(IV)]eq > 10-8 M. Predictive simulations of Pu(IV) apparent solubility due to HA show that the chosen Pu(IV)-polymer has no impact for pH > 4. However, the comparison between these predictions and recent spectroscopic results suggest that more hydrolyzed polymeric Pu(IV) species can be stabilized by HA at pH > 4. Polymeric Pu(IV)-HA species might significantly enhance Pu(IV) apparent solubility due to humics, which support a colloid-facilitated transport of this low solubility element.

  19. Simple method of isolating humic acids from organic soils

    NASA Astrophysics Data System (ADS)

    Ahmed, O. H.; Susilawati, K.; Nik Muhamad, A. B.; Khanif, M. Y.

    2009-04-01

    Humic substances particularly humic acids (HA) play a major role in soil conditioning e.g. erosion control, soil cation exchange capacity, complexation of heavy metal ions and pesticides, carbon and nitrogen cycles, plant growth and reduction of ammonia volatilization from urea. Humified substances such as coal, composts, and peat soils have substantial amounts of HA but the isolation of these acids is expensive, laborious, and time consuming. Factors that affect the quality and yield of HA isolated from these materials include extraction, fractionation, and purification periods. This work developed a simple, rapid, and cost effective method of isolating HA from peat soils. There was a quadratic relationship between extraction period and HA yield. Optimum extraction period was estimated at 4 h instead of the usual range of 12 to 48 h. There was no relationship between fractionation period and HA yield. As such 2 h instead of the usual range of 12 to 24 h fractionation period could be considered optimum. Low ash content (5%), remarkable reduction in K, coupled with the fact that organic C, E4/E6, carboxylic COOH, phenolic OH, and total acidity values of the HA were consistent with those reported by other authors suggest that the HA dealt with were free from mineral matter. This was possible because the distilled water used to purify the HA served as Bronsted-Lowry acid during the purification process of the HA. Optimum purification period using distilled waster was 1 h instead of the usual range of 1 and 7 days (uses HF and HCl and dialysis). Humic acids could be isolated from tropical peat soils within 7 h (i.e. 4 h extraction, 2 h fractionation, and 1 h purification) instead of the existing period of 2 and 7 days. This could facilitate the idea of producing organic fertilizers such as ammonium-humate and potassium-humate from humified substances since techniques devised in this study did not alter the true nature of the HA. Besides, the technique is rapid, simple

  20. The ratios of dibenzothiophene to phenanthrene and pristane to phytane as indicators of depositional environment and lithology of petroleum source rocks

    NASA Astrophysics Data System (ADS)

    Hughes, William B.; Holba, Albert G.; Dzou, Leon I. P.

    1995-09-01

    The ratio of dibenzothiophene to phenanthrene and the ratio of pristane to phytane, when coupled together, provide a novel and convenient way to infer crude oil source rock depositional environments and lithologies. Such knowledge can significantly assist in identifying the source formation(s) in a basin thereby providing valuable guidance for further exploration. The ability to infer this information from analysis of a crude oil is especially valuable as frequently the earliest samples in a new area may be shows and/or drill stem test samples from exploratory wells which are characteristically drilled on structural highs stratigraphically remote from the source formation(s). A cross-plot of dibenzothiophene/phenanthrene versus the pristane/phytane ratios measured on seventy-five crude oils from forty-one known source rocks ranging in age from Ordovician to Miocene consistently classified the oils into the following environment/ lithology groups: marine carbonate; marine carbonate/ mixed and lacustrine sulfate-rich; lacustrine sulfate-poor; marine and lacustrine shale; and fluvial/deltaic carbonaceous shale and coal. The dibenzothiophene/phenanthrene ratio alone is an excellent indicator of source rock lithology with carbonates having ratios > 1 and shales having ratios < 1. The dibenzothiophene to phenanthrene and the pristane to phytane ratios can also be used to classify source rock paleodepositional environments. The classification scheme is based on the premise that these ratios reflect the different Eh-pH regimes resulting from the significant microbiological and chemical processes occurring during deposition and early diagenesis of sediments. The dibenzothiophene/phenanthrene ratio assesses the availability of reduced sulfur for incorporation into organic matter and the pristane/phytane ratio assesses the redox conditions within the depositional environment. Interpretation of these ratios has been aided by quantitative biomarker analysis and by carbon

  1. Mechanistic insights into interaction of humic acid with silver nanoparticles.

    PubMed

    Manoharan, Vijayan; Ravindran, Aswathy; Anjali, C H

    2014-01-01

    Humic acid (HA) is one of the major components of the natural organic matter present in the environment that alters the fate and behavior of silver nanoparticles (Ag NPs). Transformation of Ag NPs happens upon interaction with HA, thereby, changing both physical and chemical properties. Fluorescence spectroscopy and scanning electron microscopy (SEM) were used to analyze the interaction of Ag NPs with HA. In pH and time-dependent studies, the near field electro dynamical environment of Ag NPs influenced the fluorescence of HA, indicated by fluorescence enhancement. SEM revealed not only morphological changes, but also significant reduction in size of Ag NPs after interaction with HA. Based on these studies, a probable mechanism was proposed for the interaction of HA with Ag NPs, suggesting the possible transformation that these nanoparticles can undergo in the environment. PMID:23801156

  2. Recovery of humic-like susbtances from low quality composts.

    PubMed

    Silva, Maria Elisabete F; Lemos, Luís T; Bastos, Margarida M S M; Nunes, Olga C; Cunha-Queda, Ana C

    2013-01-01

    The quality of four commercial composts produced from poultry litter and municipal solid wastes was assessed based on their physic-chemical, stability and maturity parameters. These properties varied among the analysed composts; it was found that electric conductivity, heavy metals content and maturity were the parameters that limited the composts quality. Therefore, the feasibility of using them to obtain liquid fertilisers rich in humic-like substances (HS) was assessed. The HS yield, phytotoxicity, heavy metals co-extraction and chemical characterization were carried out. The linkage of the HS chemical composition with the compost properties was assessed by multivariate analysis. Among the compost properties, germination indices, Cr and Cu contents were the parameters that correlated most with the HS chemical composition. The low levels of metals and absence of phytotoxicity in all the analysed HS extracts indicate that composts with low quality may be used to produce liquid organic fertilisers, substituting those from natural resources. PMID:23211490

  3. Soil humic substances hinder the propagation of prions

    NASA Astrophysics Data System (ADS)

    Leita, Liviana; Giachin, Gabriele; Margon, Alja; Narkiewicz, Joanna; Legname, Giuseppe

    2013-04-01

    capacity of clay minerals; however the contribution of soil organic components in adsorption has so far been neglected, as they represent a minor soil fraction on a weight basis. Among organic molecules, humic substances (HSs) are natural polyanions that result among the most reactive compounds in the soil and possess the largest specific surface area. Humic substances make up a large portion of the dark matter in humus and consist of heterogeneous mixtures of transformed biomolecules exhibiting a supramolecular structure. HSs are classified as humic acids (HAs), which are soluble only in alkaline solutions, and fulvic acids (FAs), which are soluble in both alkaline and acid solutions. The amphiphilic characteristics confer to HAs and FAs great versatility to interact with xenobiotics and reasonably also with prion proteins and/or prions too, leading to the formation of adducts with peculiar chemical and biophysical characteristics, thus affecting the transport, fixation and toxicity of prion. Results from our chemical, biophysical and biochemical investigation will be presented and results on anti-prion activity exerted by HAs and FAs will be provided, thus suggesting that amendment of contaminated soil with humic substances could be a strategy to contrast prion diffusion.

  4. Humic derivatives as promising hormone-like materials

    NASA Astrophysics Data System (ADS)

    Koroleva, R. P.; Khudaibergenova, E. M.; Kydralieva, K. A.; Jorobekova, Sh. J.

    2009-04-01

    The aim of this research is to prepare novel bio-inoculants derived from coal humic substances (HS) using bio-solubilization technique. This approach can be considered to some extent as model for supply plants with available nutrients throw the mineralisation of organic matter in soils by bacteria and fungi. Screening for the stable and active microorganisms' strains possessing ability to degrade humic substances was performed. The following subjects were examined using different isolation methods: natural microbial population from city soil, wood rot of Ulmis Pamila and biohumus of vermiculture of Eisenia foetida. Approaches for monitoring the humics-solubilizing fungi growth under liquid surface conditions in the presence of HS, proper conditions of bio-solubilization technique were elaborated. Coal humic acids (HA) from oxidized brown coal (Kyrgyz deposits) were isolated and added to a Czapek nutrient broth which was used either in full strength or without nitrogen source. The individual flasks were inoculated with natural microbial populations of corresponding cultivated soil, biohumus and wood rot samples for 12 months. Evaluation of phyto-hormonal activity of the produced HS and their derivatives in respect to higher plants with auxine and gibberellic tests was performed. To characterize structure of the biopreparations obtained, an experimental approach was undertaken that implies application of different complementary techniques for the structural analysis of biopreparations. As those were used: elemental and functional analysis, FTIR and 1H, 13C NMR spectroscopy and size-exclusion chromatography. According to the elemental composition of HS recovered from microbial cultures, a decrease in carbon and a significant increase of nitrogen in HS reisolated from the full strength broth inoculated with wood-decay microorganisms has been found. If biohumus microorganisms were used as inoculum, only minor changes were detected in the elemental composition of HS. A

  5. Kinetic characteristic of phenanthrene sorption in aged soil amended with biochar

    NASA Astrophysics Data System (ADS)

    Kim, Chanyang; Kim, Yong-Seong; Hyun, Seunghun

    2015-04-01

    Biochar has been recently highlighted as an amendment that affects yield of the crops by increasing pH, cation exchange capacity and water retention, and reduces the lability of contaminants by increasing sorption capacity in the soil system. Biochar's physico-chemical properties, high CEC, surfaces containing abundant micropores and macropores, and various types of functional groups, play important roles in enhancing sorption capacity of contaminants. Aging through a natural weathering process might change physico-chemical properties of biochar amended in soils, which can affect the sorption behavior of contaminants. Thus, in this study, the sorption characteristics of phenanthrene (PHE) on biochar-amended soils were studied with various types of chars depending on aging time. To do this, 1) soil was amended with sludge waste char (SWC), wood char (WC), and municipal waste char (MWC) during 0, 6, and 12 month. Chars were applied to soil at 1% and 2.5% (w/w) ratio. 2) Several batch kinetic and equilibrium studies were conducted. One-compartment first order and two-compartment first order model apportioning the fraction of fast and slow sorbing were selected for kinetic models. Where, qt is PHE concentration in biochar-amended soils at each time t, qeis PHE concentration in biochar-amended soils at equilibrium. ff is fastly sorbing fraction and (1-ff) is slowly sorbing fraction. k is sorption rate constant from one-compartment first order model, k1 and k2 are sorption rate constant from two-compartment first order model, t is time (hr). The equilibrium sorption data were fitted with Fruendlich and Langmuir equation. 3) Change in physico-chemical properties of biochar-amended soils was investigated with aging time. Batch equilibrium sorption results suggested that sorbed amount of PHE on WC was greater than SWC and MWC. The more char contents added to soil, the greater sorption capacity of PHE. Sorption equilibrium was reached after 4 hours and equilibrium pH ranged

  6. Limitations in the use of commercial humic acids in water and soil research

    USGS Publications Warehouse

    Malcolm, R.L.; MacCarthy, P.

    1986-01-01

    Seven samples of commercial "humic acids", purchased from five different suppliers, were studied, and their characteristics were compared with humic and fulvic acids isolated from streams, soils, peat, leonardite, and a dopplerite sample. Cross-polarization and magic-angle spinning 13C NMR spectroscopy clearly shows pronounced differences between the commercial materials and all other samples. Elemental and infrared spectroscopic data do not show such clear-cut differences but can be used as supportive evidence, with the 13C NMR data, to substantiate the above distinctions. As a result of these differences and due to the general lack of information relating to the source, method of isolation, or other pretreatment of the commercial materials, these commercial products are not considered to be appropriate for use as analogues of true soil and water humic substances, in experiments designed to evaluate the nature and reactivity of humic substances in natural waters and soils.

  7. Comparative studies of the reduction behavior of chromium(VI) by humic substances and their precursors

    SciTech Connect

    Nakayasu, Ken; Sasaki, Keiko; Tanaka, Shunitz; Nakamura, Hiroshi ); Fukushima, Masami )

    1999-06-01

    Hexavalent chromium (Cr[VI]) is reduced by dissolved organic carbons (DOCs) such as humic substances, tannic acid (TA), and gallic acid (GA). The kinetic constants and the resulting chemical species after the reduction were compared with each other. The kinetic constants for GA and TA, which are model precursors of humic substances, were two to three orders of magnitude larger than those for the humic substances when these kinetic constants were expressed as a function of the molar concentration of the reductive functional group (F[sub red]) in various DOCs. After the reduction of Cr(VI), the percentages of the species complexed with GA and TA were higher than those with the humic substances. This appears to be due to the formation of high molecular weight compounds by polymerization during the reduction of Cr(VI) and complexation of Cr(III) with the polymerized compounds. The UV-vis spectrophotometric data and gel permeation chromatography support this view.

  8. NOVEL APPROACH TO METAL-HUMIC COMPLEXATION STUDIES BY LANTHANID ION PROBE SPECTROSCOPY

    EPA Science Inventory

    Naturally occurring humic substances are known to be potentially strong binders of metals in the environment. ensitive spectroscopic technique, based on the unique luminescence properties of the tripositive lanthanide metal ions, has been developed to selectively probe metal bind...

  9. Role of dissolved humic substances surrogates on phthalate esters migration from sewage sludge.

    PubMed

    Zheng, Z; He, P J; Zhang, H; Shao, L M

    2008-01-01

    The facilitated transport of dibutyl phthalate (DBP) and di(2-ethylhexyl) phthalate (DEHP), the priority endocrine disrupting chemicals in sludge, by dissolved humic substances (HS) was evaluated by batch extraction. The DBP, much less hydrophobic than DEHP, was inclined to migrate from sludge matrix into humic substances solutions, while the DEHP could not migrate facilitated by most humic and fulvic acids solutions, except the humic acid surrogate of high humification. This result revealed that the affinity of DEHP in sludge matrix exceeded DBP and was not susceptible by weak HS. The hydrophobic property controlled the association of phthalic acid esters on sludge residual phases. Migration rate of DBP was positively correlated to the weight-average molecular weight of HS surrogates and the aromatic extents of HA. Some functional groups in HS molecules benefited to the facilitated transport of DBP. PMID:18360003

  10. Study of coagulation processes of selected humic acids under copper ions influence*

    NASA Astrophysics Data System (ADS)

    Boguta, Patrycja; Sokolowska, Zofia

    2013-04-01

    Humic acids have limited sorption capacity and big dose of metal or other mineral component which can be sorbed on humic acids, can cause saturation of negative, surface charge of humic acids leading to destabilization of dissolved humic acids compounds. Destabilisation can be observed as coagulation and floculation proces of humic acids. However there are a lot of mechanisms which causing precipitation of humic acids. Thereby, in order to full description of coagulation process, different methods should be applied. Ordinarily, humic acids coagulation is studied by measurement of absorbance, transmittance or carbon loss in solution. Meanwhile, very significant information is also variation of metal content in soil solution and information whether metal goes to precipitate together with humic acids or stays in dissolved form in solution. So, that, from one side, processes of stronger accumulation of metal can lead to soil degradation and micronutrient deficiency for plants. However, there is also possibility to stay metal in solution in toxic and bioavailable form for plants. Main aim of this paper was to study coagulation process of different humic acids extracted from mucking peats under copper ions influence at adjusted pH to 5. In order to this, four peaty-muck soils were taken from selected places in east part of Poland (meadows and river valleys). These soils differed by humification degree, secondary transformation, density and pH. At next step, humic acids were extracted from soils using sodium hydroxide (NaOH) extractant. After exact purification by washing with HF-HCl mixture and water, humic acids were liofilized. Solutions of humic acids were prepared at concentration 40 mg/dm3 with addition of different amount of copper ions to obtain final concentration of Cu(II) ranged from 0-40mg/dm3. After 24 hours solutions were investigated using measurements of absorbance at 470nm (UV-VIS spectrometer Jasco V-530), measurements of organic carbon in solution

  11. Evaluation of humic fractions potential to produce bio-oil through catalytic hydroliquefaction.

    PubMed

    Lemée, L; Pinard, L; Beauchet, R; Kpogbemabou, D

    2013-12-01

    Humic substances were extracted from biodegraded lignocellulosic biomass (LCBb) and submitted to catalytic hydroliquefaction. The resulting bio-oils were compared with those of the initial biomass. Compared to fulvic and humic acids, humin presented a high conversion rate (74 wt.%) and the highest amount of liquid fraction (66 wt.%). Moreover it represented 78% of LCBb. Humin produced 43 wt.% of crude oil and 33 wt.% of hexane soluble fraction containing hydrocarbons which is a higher yield than those from other humic substances as well as from the initial biomass. Hydrocarbons were mainly aromatics, but humin produces the highest amount of aliphatics. Considering the quantity, the quality and the molecular composition of the humic fractions, a classification of the potential of the latter to produce fuel using hydroliquefaction process can be assess: Hu>AF>AH. The higher heating value (HHV) and oxygen content of HSF from humin were fully compatible with biofuel characteristics. PMID:24140851

  12. Radiocarbon of dissolved humic substances in river waters from the Chernobyl area

    NASA Astrophysics Data System (ADS)

    Nagao, Seiya; Aramaki, Takafumi; Fujitake, Nobuhide; Matsunaga, Takeshi; Tkachenko, Yuri

    2004-08-01

    Radiocarbon (14C) was used to study the origin and transport of aquatic humic substances in river waters at the Chernobyl area, which received a pulse input of 14C as a consequence of the nuclear accident. Water samples were collected in April 1999 from the Pripyat and Sakhan Rivers, which flow through the radioactive contaminated area (30 km exclusion zone). The Δ14C values of humic and fulvic acids ranged from -68‰ to +75‰ and were ∼400‰ lower than those of non-contaminated environments. The aquatic humic substances may be derived mainly from those of bog, peat, and podzolic soil with older 14C age, and thereby reflect a larger proportion of older groundwater humic substances. Contribution of 14C by the Chernobyl accident appears to be small because of the long residence time of organic carbon at the surface soil.

  13. Limitations in the use of commercial humic acids in water and soil research

    SciTech Connect

    Malcolm, R.L.; MacCarthy, P.

    1986-09-01

    Seven samples of commercial humic acids, purchased from five different suppliers, were studied, and their characteristics were compared with humic and fulvic acids isolated from streams, soils, peat, leonardite, and a dopplerite sample. Cross-polarization and magic-angle spinning /sup 13/C NMR spectroscopy clearly shows pronounced differences between the commercial materials and all other samples. Elemental and infrared spectroscopic data do not show such clear-cut differences but can be used as supportive evidence, with the /sup 13/C NMR data, to substantiate the above distinctions. As a result of these differences and due to the general lack of information relating to the source, method of isolation, or other pretreatment of the commercial materials, these commercial products are not considered to be appropriate for use as analogues of true soil and water humic substances, in experiments designed to evaluate the nature and reactivity of humic substances in natural waters and soils.

  14. Mutagenic activity of some coal-derived humic compounds evaluated by the Ames test.

    PubMed

    Bernacchi, F; Ponzanelli, I; Barale, R; Loprieno, N

    1996-07-10

    Two coal-derived humic substances (Sulcis and South Africa, Eniricerche, Italy) have been evaluated for their mutagenic activity on TA98 and TA100 Salmonella typhimurium strains, either in presence or in absence of metabolic activation (S9). Both compounds showed no effect on the two strains, as observed with natural humic acid (Fluka). After chlorination, coal-derived humic acids induced a strong dose-related increase in the number of revertants on TA100 without S9, whose extent was directly proportional to the chlorination ratios. Such effect was completely suppressed when a sodium thiosulfate solution (10%) was added at the end of the chlorination period (about 90 h). The analogies with natural humic acid mutagenicity are discussed. PMID:8700175

  15. Intrahorizon differentiation of the structural-functional parameters of the humic acids from a typical chernozem

    NASA Astrophysics Data System (ADS)

    Chukov, S. N.; Golubkov, M. S.; Ryumin, A. G.

    2010-11-01

    It is shown that some structural-functional parameters of humic acids from the surface (0-5 cm) layer of a typical chernozem differ from those in a deeper (5-20 cm) layer. The Cha-to-Cfa ratio in the surface layer is by 1.7 times lower, and the concentration of free radicals is by almost an order of magnitude lower than that in the layer of 5-20 cm. The stimulating effect of humic acids from the surface layer on the processes of photosynthesis is sharply retarded, whereas their effect on respiration of Chlorella vulgaris is more pronounced. Humic acids from the deeper layer of chernozem have a much stronger stimulating effect on photosynthesis and a very weak stimulating effect of respiration. The concentration of free radicals in humic acids and the activity of physiological processes of photosynthesis in Chlorella vulgaris display a tight correlative relationship.

  16. CAPILLARY ELECTROPHORESIS IN THE ANALYSIS OF HUMIC SUBSTANCES FACTS AND ARTIFACTS

    EPA Science Inventory

    Humic substances, extracted as mixtures from soil and surface waters according to their solubility in acids and bases, are relatively high-molecular-mass polyelectrolytes containing aromatic, aliphatic and heterocyclic subunits. The degree of ionization of their phenolic and carb...

  17. Covalent binding of aniline to humic substances and whole soil organic matter

    SciTech Connect

    Thorn, K.A.; Goldenberg, W.S.; Younger, S.J.

    1995-12-31

    Aromatic amines enter the environment from the chemical or microbial degradation of dyes, explosives, and the acylanilide, phenylcarbamate, and phenylurea classes of herbicides. One possible fate of aromatic amines in soils is covalent binding to naturally occurring organic matter. The binding of {sup 15}N-labelled aniline to the fulvic and humic acids extracted from an Elliot silt loam soil with and without catalysis by peroxidase or birnessite has been examined by a combination of liquid and solid state {sup 15}N NMR. In the absence of catalysts, aniline undergoes a complex series of nucleophilic addition reactions with the carbonyl functionality of the humic substances to form both heterocyclic and nonheterocyclic condensation products. In the presence of the catalysts, aniline undergoes free radical coupling reactions together with nucleophilic addition reactions with the humic substances. Reaction of aniline with the whole soil most closely resembled the noncatalyzed reactions with the humic substances, as determined by solid state {sup 15}N NMR.

  18. Redox and complexation interactions of neptunium(V) with quinonoid-enriched humic derivatives

    SciTech Connect

    Shcherbina, Natalia S.; Perminova, Irina V.; Kalmykov, Stephan N.; Kovalenko, Anton N.; Novikov, Alexander P.; Haire, Richard {Dick} G

    2007-01-01

    Actinides in their higher valence states (e.g., MO{sub 2}{sup +} and MO{sub 2}{sup 2+}, where M can be Np, Pu, etc) possess a higher potential for migration and in turn pose a substantial environmental threat. To minimize this potential for migration, reducing them to lower oxidation states (e.g., their tetravalent state) can be an attractive and efficient remedial process. These lower oxidation states are often much less soluble in natural aqueous media and are, therefore, less mobile in the environment. The research presented here focuses on assessing the performance of quinonoid-enriched humic derivatives with regards to complexing and/or reducing Np(V) present in solution. These 'designer' humics are essentially derived reducing agents that can serve as reactive components of a novel humic-based remediation technology. The derivatives are obtained by incorporating different quinonoid-moieties into leonardite humic acids. Five quinonoid-derivatives are tested in this work and all five prove more effective as reducing agents for selected actinides than the parent leonardite humic acid, and the hydroquinone derivatives are better than the catechol derivatives. The reduction kinetics and the Np(V) species formed with the different derivatives are studied via a batch mode using near-infrared (NIR)-spectroscopy. Np(V) reduction by the humic derivatives under anoxic conditions at 293 K and at pH 4.7 obeys first-order kinetics. Rate constants range from 1.70 x 10{sup -6} (parent humic acid) to 1.06 x 10{sup -5} sec{sup -1} (derivative with maximum hydroquinone content). Stability constants for Np(V)-humic complexes calculated from spectroscopic data produce corresponding Log{beta} values of 2.3 for parent humic acid and values ranging from 2.5 to 3.2 at pH 4.7 and from 3.3 to 3.7 at pH 7.4 for humic derivatives. Maximum constants are observed for hydroquinone-enriched derivatives. It is concluded that among the humic derivatives tested, the hydroquinone-enriched ones

  19. Redox and complexation interactions of neptunium(V) with quinonoid-enriched humic derivatives.

    PubMed

    Shcherbina, Natalia S; Perminova, Irina V; Kalmykov, Stepan N; Kovalenko, Anton N; Haire, Richard G; Novikov, Alexander P

    2007-10-15

    Actinides in their higher valence states (e.g., MO2+ and MO2(2+), where M can be Np, Pu, etc) possess a higher potential for migration and in turn pose a substantial environmental threat. To minimize this potential for migration, reducing them to lower oxidation states (e.g., their tetravalent state) can be an attractive and efficient remedial process. These lower oxidation states are often much less soluble in natural aqueous media and are, therefore, less mobile in the environment. The research presented here focuses on assessing the performance of quinonoid-enriched humic derivatives with regardsto complexing and/ or reducing Np(V) present in solution. These "designer" humics are essentially derived reducing agents that can serve as reactive components of a novel humic-based remediation technology. The derivatives are obtained by incorporating different quinonoid-moieties into leonardite humic acids. Five quinonoid-derivatives are tested in this work and all five prove more effective as reducing agents for selected actinides than the parent leonardite humic acid, and the hydroquinone derivatives are better than the catechol derivatives. The reduction kinetics and the Np(V) species formed with the different derivatives are studied via a batch mode using near-infrared (NIR)-spectroscopy. Np(V) reduction by the humic derivatives under anoxic conditions at 293 K and at pH 4.7 obeys first-order kinetics. Rate constants range from 1.70 x 10(-6) (parent humic acid) to 1.06 x 10(-5) sec(-1) (derivative with maximum hydroquinone content). Stability constants for Np(V)-humic complexes calculated from spectroscopic data produce corresponding Logbeta values of 2.3 for parent humic acid and values ranging from 2.5 to 3.2 at pH 4.7 and from 3.3 to 3.7 at pH 7.4 for humic derivatives. Maximum constants are observed for hydroquinone-enriched derivatives. It is concluded that among the humic derivatives tested, the hydroquinone-enriched ones are the most useful for addressing

  20. Insight into sorption mechanism of phenanthrene onto gemini modified palygorskite through a multi-level fuzzy-factorial inference approach.

    PubMed

    Zhao, Shan; Huang, Gordon; Wang, Shuo; Wang, Xiuquan; Huang, Wendy

    2016-07-28

    A multi-level fuzzy-factorial inference approach was proposed to examine the sorption behavior of phenanthrene on palygorskite modified with a gemini surfactant. Fuzzy set theory was used to determine five experimentally controlled environmental factors with triangular membership functions, including initial concentration, added humid acid dose, ionic strength, temperature, and pH. The statistical significance of factors and their interactions affecting the sorption process was revealed through a multi-level factorial experiment. Initial concentration, ionic strength, and pH were identified as the most significant factors based on the multi-way ANOVA results. Examination of curvature effects of factors revealed the nonlinear complexity inherent in the sorption process. The potential interactions among experimental factors were detected, which is meaningful for providing a deep insight into the sorption mechanisms under the influences of factors at different levels. PMID:27163726

  1. Humic acids as electron acceptors for anaerobic microbial oxidation of vinyl chloride and dichloroethene

    USGS Publications Warehouse

    Bradley, P.M.; Chapelle, F.H.; Lovley, D.R.

    1998-01-01

    Anaerobic oxidation of [1,2-14C]vinyl chloride and [1,2- 14C]dichloroethene to 14CO2 under humic acid-reducing conditions was demonstrated. The results indicate that waterborne contaminants can be oxidized by using humic acid compounds as electron acceptors and suggest that natural aquatic systems have a much larger capacity for contaminant oxidation than previously thought.

  2. Humic acids as electron acceptors for anaerobic microbial oxidation of vinyl chloride and dichloroethane

    SciTech Connect

    Bradley, P.M.; Chapelle, F.H.; Lovley, D.R.

    1998-08-01

    Anaerobic oxidation of [1,2-{sup 14}C]vinyl chloride and [1,2-{sup 14}C]dichloroethene to {sup 14}CO{sub 2} under humic acid-reducing conditions was demonstrated. The results indicate that waterborne contaminants can be oxidized by using humic acid compounds as electron acceptors and suggest that natural aquatic systems have a much larger capacity for contaminant oxidation than previously thought.

  3. The role of sulfur in the formation of humic polymers in marine sediments

    SciTech Connect

    Vairavamurthy, M.A.

    1996-12-31

    In anoxic marine sediments, hydrogen sulfide formed from bacterial sulfate reduction significantly impacts the diagenesis and preservation of organic matter through incorporating sulfur into the latter; however, the underlying geochemical mechanisms are still unclear. We used XANES spectroscopy to investigate whether di- and poly-sulfide linkages are involved in the formation of humic polymers in anaerobic marine sediments. The approach was to treat the humic acids with tributyl phosphine, that cleaves di- and polysulfide linkages, and to examine the changes in XANES spectra before and after such treatment. With simple di- and polysulfide linkages, and to examine the changes in XANES spectra before and after such treatment. With simple di- and poly-sulfide compounds (benzyl disulfide and trisulfide), the shape of the XANES spectra changed when treated with tributyl phosphine because of the formation of sulfhydryl groups. A similar effect was observed for sedimentary humic acids isolated from a salt marsh in Shelter Island, suggesting that di- and poly-sulfide linkages are indeed involved in forming humic polymers. We determined by liquid chromatography, two major low-molecular-weight thiols, 3-mercatopropionate and methane thiol, among the compounds released from tributyl phosphine treated humics. These thiols can be easily degraded by sedimentary bacteria when they are present in solution. However, both thiols were present as components of the humic substances throughout the sediment column, down to the 22-cm depth sampled, suggesting that incorporation into humic polymers, in fact, provides a mechanism for preventing mineralization of the bound organic matter. In general, humic polymers resist microbial degradation because of their randomly polymerized structure.

  4. Comparative study of humic acid removal and floc characteristics by electrocoagulation and chemical coagulation.

    PubMed

    Semerjian, Lucy; Damaj, Ahmad; Salam, Darine

    2015-11-01

    The current study aims at investigating the efficiency of electrocoagulation for the removal of humic acid from contaminated waters. In parallel, conventional chemical coagulation was conducted to asses humic acid removal patterns. The effect of varying contributing parameters (matrix pH, humic acid concentration, type of electrode (aluminum vs. iron), current density, solution conductivity, and distance between electrodes) was considered to optimize the electrocoagulation process for the best attainable humic acid removal efficiencies. Optimum removals were recorded at pH of 5.0-5.5, an electrical conductivity of 3000 μS/cm at 25 °C, and an electrode distance of 1 cm for both electrode types. With aluminum electrodes, a current density of 0.05 mA/cm2 outperformed 0.1 mA/cm2 yet not higher densities, whereas a current density of 0.8 mA/cm2 was needed for iron electrodes to exhibit comparable performance. With both electrode types, higher initial humic acid concentrations were removed at a slower rate but ultimately attained almost complete removals. On the other hand, the best humic acid removals (∼90%) by chemical coagulation were achieved at 4 mg/L for both coagulants. Also, higher removals were attained at elevated initial humic acid concentrations. Humic acid removals of 90% or higher at an initial HA concentration of 40 mg/L were exhibited, yet alum performed better at the highest experimented concentration. It was evident that iron flocs were larger, denser, and more geometrical in shape compared to aluminum flocs. PMID:26439123

  5. Humic and fluvic acids and organic colloidal materials in the environment

    SciTech Connect

    Gaffney, J.S.; Marley, N.A.; Clark, S.B.

    1996-04-01

    Humic substances are ubiquitous in the environment, occurring in all soils, waters, and sediments of the ecosphere. Humic substances arise from the decomposition of plant and animal tissues yet are more stable than their precursors. Their size, molecular weight, elemental composition, structure, and the number and position of functional groups vary, depending on the origin and age of the material. Humic and fulvic substances have been studied extensively for more than 200 years; however, much remains unknown regarding their structure and properties. Humic substances are those organic compounds found in the environment that cannot be classified as any other chemical class of compounds. They are traditionally defined according to their solubilities. Fulvic acids are those organic materials that are soluble in water at all pH values. Humic acids are those materials that are insoluble at acidic pH values (pH < 2) but are soluble at higher pH values. Humin is the fraction of natural organic materials that is insoluble in water at all pH values. These definitions reflect the traditional methods for separating the different fractions from the original mixture. The humic content of soils varies from 0 to almost 10%. In surface waters, the humic content, expressed as dissolved organic carbon (DOC), varies from 0.1 to 50 ppm in dark-water swamps. In ocean waters, the DOC varies from 0.5 to 1.2 ppm at the surface, and the DOC in samples from deep groundwaters varies from 0.1 to 10 ppm. In addition, about 10% of the DOC in surface waters is found in suspended matter, either as organic or organically coated inorganic particulates. Humic materials function as surfactants, with the ability to bind both hydrophobic and hydrophyllic materials, making numic and fluvic materials effective agents in transporting both organic and inorganic contaminants in the environment.

  6. Characterization of the International Humic Substances Society standard and reference fulvic and humic acids by solution state carbon-13 (13C) and hydrogen-1 (1H) nuclear magnetic resonance spectrometry

    USGS Publications Warehouse

    Thorn, Kevin A.; Folan, Daniel W.; MacCarthy, Patrick

    1989-01-01

    Standard and reference samples of the International Humic Substances Society have been characterized by solution state carbon-13 and hydrogen-1 nuclear magnetic resonance (NMR) spectrometry. Samples included the Suwannee River, soil, and peat standard fulvic and humic acids, the Leonardite standard humic acid, the Nordic aquatic reference fulvic and humic acids, and the Summit Hill soil reference humic acid. Aqueous-solution carbon-13 NMR analyses included the measurement of spin-lattice relaxation times, measurement of nuclear Overhauser enhancement factors, measurement of quantitative carbon distributions, recording of attached proton test spectra, and recording of spectra under nonquantitative conditions. Distortionless enhancement by polarization transfer carbon-13 NMR spectra also were recorded on the Suwannee River fulvic acid in deuterated dimethyl sulfoxide. Hydrogen-1 NMR spectra were recorded on sodium salts of the samples in deuterium oxide. The carbon aromaticities of the samples ranged from 0.24 for the Suwannee River fulvic acid to 0.58 for the Leonardite humic acid.

  7. Complexation of transuranic ions by humic substances: Application of laboratory results to the natural system

    SciTech Connect

    Czerwinski, K.; Kim, J.

    1997-12-31

    Environmental investigations show transuranic ions sorb to humic substances. The resulting species are often mobile and are expected to be important vectors in the migration of transuranic ions in natural systems. However, these environmental studies yield no quantitative data useful for modeling. Laboratory complexation experiments with transuranic ions and humic substances generate thermodynamic data required for complexation modeling. The data presented in this work are based on the metal ion charge neutralization model, which is briefly described. When a consistent complexation model is used, similar results are obtained from different experimental conditions, techniques, and laboratories. Trivalent transuranic ions (Cm(III), Am(III)) have been extensively studied with respect to pH, ionic strength, origin of humic acid, and mixed species formation. The complexation of Np(V) has been examined over a large pH and metal ion concentration range with different humic acids. Some data does exist on the complexation ion concentration range with different humic acids. Some data does exist on the complexation of plutonium with humic acid, however further work is needed. Calculations on the Gorleben aquifer system using the thermodynamic data are presented. Critical information lacking from the thermodynamic database is identified. 55 refs., 2 figs., 3 tabs.

  8. Distribution of proton dissociation constants for model humic and fulvic acid molecules.

    PubMed

    Atalay, Yasemin B; Carbonaro, Richard F; Di Toro, Dominic M

    2009-05-15

    The intrinsic proton binding constants of 10 model humic acid and six model fulvic acid molecules are calculated using SPARC Performs Automated Reasoning in Chemistry (SPARC). The accuracy of the SPARC calculations is examined using estimated microscopic binding constants of various small organic acids. An equimolar mixture of the appropriate hypothetical molecules is used as a representation of soil and aqueous humic acid and fulvic acid. The probability distributions of the mixture microscopic proton binding constants and the intrinsic proton binding constants in the metal speciation models WHAM V and WHAM VI (Windermere humic aqueous models) are compared. The idea is to assess the predictive value of the molecular mixture models as representations of heterogeneous natural organic matter. For aqueous humic and fulvic acids, the results are comparable to the WHAM distribution. For soil humic acid, the WHAM probability distribution is less acidic for the carboxylic sites but similar to that of the phenolic sites. Computations made using the WHAM molecular distributions and WHAM VI are comparable to titration data for Suwannee River fulvic acid. These results suggest that mixture molecular models can be used to investigate and predict the binding of metal cations to humic and fulvic acids. PMID:19544864

  9. Effects of extracellular polymeric and humic substances on chlorpyrifos bioavailability to Chironomus riparius.

    PubMed

    Lundqvist, Anna; Bertilsson, Stefan; Goedkoop, Willem

    2010-04-01

    The role of sediment organic matter quality and quantity for chlorpyrifos bioavailability was studied in experiments with Chironomus riparius larvae and with four types of organic matter; (1) commercially available extracellular polymeric substances (EPS), (2) EPS produced by sediment microbes, (3) commercially available humic substances and, (4) humic substances extracted from a boreal lake. The effects of each type of organic matter were assessed at three concentrations. We used a (14)C-tracer approach to quantify uptake of chlorpyrifos in the larvae, and the partitioning of the insecticide within the microcosm. Carbon-normalised larval uptake was reduced both by EPS and humic substances. However, the reduction in uptake was much greater for EPS than for humic substances: uptake was reduced by 94 and 88% for commercial and complex EPS, and by 59 and 57% for commercial and complex humic substances, respectively. We also found differences in chlorpyrifos uptake, and sediment concentrations between treatments with commercially available and complex polymers, suggesting that minor differences in the quality of relatively simple organic molecules can affect contaminant behaviour in ecotoxicological studies. Passive uptake in dead controls was 40% of that in living larvae. Therefore, both passive and digestive uptake were important processes for chlorpyrifos uptake by larvae. Our results show that both EPS and humic substances affect chlorpyrifos bioavailability to sediment biota negatively and contribute to the understanding of the processes that regulate organic contaminant bioavailability in aquatic environments. PMID:19851864

  10. Characterization of the interaction of uranyl ions with humic acids by x-ray absorption spectroscopy

    SciTech Connect

    Reich, T.; Denecke, M.A.; Pompe, S.

    1995-11-01

    Humic substances are present throughout the environment in soil and natural water. They are organic macromolecules with a variable structural formula, molecular weight, and a wide variety of functional groups depending on their origin. In natural waters, humic substances represent the main component of the {open_quotes}dissolved organic carbon{close_quotes} (DOC). The DOC may vary considerably from 1 mg/L at sea water surfaces to 50 mg/L at the surface in dark water swamps. There is strong evidence that all actinides form complexes with humic substances in natural waters. Therefore, humic substances can play an important role in the environmental migration of radionuclides by enhancing their transport. Retardation through humic substance interaction may be also possible due to formation of precipitating agglomerates. For remediation and restoration of contaminated environmental sites and risk assessment of future nuclear waste repositories, it is important to improve the predictive capabilities for radionuclide migration through a better understanding of the interaction of radionuclides with humic substances.

  11. Determination of molecular weights of humic substances by analytical (UV scanning) ultracentrifugation

    SciTech Connect

    Reid, P.M.; Wilkinson, A.E.; Tipping, E.; Jones, M.N. Freshwater Biological Association, Ambleside, Cumbria )

    1990-01-01

    Samples of peat humic acid (PHA) and surface water humic (WBHA) and fulvic (WBFA) acids have been extracted from Whitray Beck in North Yorkshire, U.K. The molecular weights of the extracts have been investigated by sedimentation equilibrium using an analytical ultracentrifuge equipped with a UV scanning system. The system allows measurements to be made at low concentrations of humic substances, comparable to those existing in natural humic-rich water. A method is described for correcting UV scanning data for changes in the optical properties of the materials with changing molecular weight. Measurements have also been made on reference samples of Suwannee river humic (SRHA) and fulvic (SRFA) acids from the International Humic Substances Society (IHSS). The weight-average moleuclar weights of the extracted samples range from approximately 2,000 to 17,000 and follow a series PHA > WBHA > WBFA. Apparent specific volumes of these materials were in a range from 0.45 to 0.58 cm{sup 3} g{sup {minus}1} as measured by digital densimetry. Al the samples studied were analysed by gel filtration, but the molecular weights determined by this method based on a globular protein calibration are not in good accord with the absolute determinations by the sedimentation-equilibrium technique. The molecular weight of the SRHA determined by sedimentation equilibrium is in good agreement with that reported by BECKETT (1987) et al., based on flow field-flow fractionation.

  12. Determination of molecular weights of humic substances by analytical (UV scanning) ultracentrifugation

    NASA Astrophysics Data System (ADS)

    Reid, Patrick M.; Wilkinson, Alan E.; Tipping, Edward; Jones, Malcolm N.

    1990-01-01

    Samples of peat humic acid (PHA) and surface water humic (WBHA) and fulvic (WBFA) acids have been extracted from Whitray Beck in North Yorkshire, U.K. The molecular weights of the extracts have been investigated by sedimentation equilibrium using an analytical ultracentrifuge equipped with a UV scanning system. The system allows measurements to be made at low concentrations of humic substances, comparable to those existing in natural humic-rich water. A method is described for correcting UV scanning data for changes in the optical properties of the materials with changing molecular weight. Measurements have also been made on reference samples of Suwannee river humic (SRHA) and fulvic (SRFA) acids from the International Humic Substances Society (IHSS). The weight-average molecular weights of the extracted samples range from approximately 2000 to 17000 and follow a series PHA > WBHA > WBFA. Apparent specific volumes of these materials were in a range from 0.45 to 0.58 cm 3 g -1 as measured by digital densimetry. All the samples studied were analysed by gel filtration, but the molecular weights determined by this method based on a globular protein calibration are not in good accord with the absolute determinations by the sedimentation-equilibrium technique. The molecular weight of the SRHA determined by sedimentation equilibrium is in good agreement with that reported by BECKETT (1987) et al., based on flow field-flow fractionation.

  13. Reconnaissance samplings and characterization of aquatic humic substances at the Yuma Desalting Test Facility, Arizona

    USGS Publications Warehouse

    Malcolm, R.L.; Wershaw, R. L.; Thurman, E.M.; Aiken, G.R.; Pinckney, D.J.; Kaakinen, J.

    1981-01-01

    Smectite clay minerals were found to be the principal compound on the surface of the cellulose-acetate, reverse-osmosis membranes at the Yuma Desalting Test Facility. These clay minerals were not present in the pumped ground water, but were blown into the conveyance canal from adjacent soils. Humic substances from the water and suspended sediments were associated with the clay films on the membrane, but no definitive results concerning their role in fouling were achieved. Microbial fouling is believed to be only a minor aspect of membrane fouling. Chemical and physical changes in humic substances were extensively studied at four points in the water-treatment process. Humic substances accounted for the largest component (over 25 percent) of organic constituents. Humic substances in the canal source water were similar to other aquatic humic substances present in natural waters. During the treatment process, these substances are brominated and decolorized. The effect of these halogenated humic substances on membrane fouling is unclear, but their presence in the reverse-osmosis product water and reverse-osmosis reject brine, along with volatile trihalomethanes, has led to environmental concerns. (USGS)

  14. Humic fractions of forest, pasture and maize crop soils resulting from microbial activity.

    PubMed

    Tavares, Rose Luiza Moraes; Nahas, Ely

    2014-01-01

    Humic substances result from the degradation of biopolymers of organic residues in the soil due to microbial activity. The objective of this study was to evaluate the influence of three different ecosystems: forest, pasture and maize crop on the formation of soil humic substances relating to their biological and chemical attributes. Microbial biomass carbon (MBC), microbial respiratory activity, nitrification potential, total organic carbon, soluble carbon, humic and fulvic acid fractions and the rate and degree of humification were determined. Organic carbon and soluble carbon contents decreased in the order: forest > pasture > maize; humic and fulvic acids decreased in the order forest > pasture = maize. The MBC and respiratory activity were not influenced by the ecosystems; however, the nitrification potential was higher in the forest than in other soils. The rate and degree of humification were higher in maize soil indicating greater humification of organic matter in this system. All attributes studied decreased significantly with increasing soil depth, with the exception of the rate and degree of humification. Significant and positive correlations were found between humic and fulvic acids contents with MBC, microbial respiration and nitrification potential, suggesting the microbial influence on the differential formation of humic substances of the different ecosystems. PMID:25477932

  15. The dissolution of calcite in aqueous acid: The influence of humic species

    SciTech Connect

    Compton, R.G.; Sanders, G.H.W. )

    1993-07-01

    The kinetics of proton-induced calcite dissolution in aqueous solution in the presence of humic acids and their sodium salts are reported. In equilibrated acid solutions (pH <4) there is no inhibition by humic material and dissolution proceeds at a rate simply determined by the solution pH. Contrastingly the sodium salts of humic acids were found to have a significant inhibitory effect on the acid catalyzed dissolution. This was quantified using a novel channel flow cell experiment which employed two electrodes, the upstream of which was used to inject protons into a neutral solution, which also contained sodium salts of humic acid, via electrolytic oxidation of dissolved hydroquinone. The two electrodes were located immediately upstream and downstream of a calcite crystal so that the proton injection served to dissolve the calcite in the (inhibiting) presence of humic salts unequilibrated with the solution pH. The amount of H[sup +] which survived passage to the downstream detector'' electrode was used to quantify the rate of dissolution and hence the inhibitory effects of the humic acid. The latter were found to operate in a manner not inconsistent with Langmuirian adsorption.

  16. Humic substances as fully regenerable electron acceptors in recurrently anoxic environments

    NASA Astrophysics Data System (ADS)

    Klüpfel, Laura; Piepenbrock, Annette; Kappler, Andreas; Sander, Michael

    2014-03-01

    Humic substances form through the degradation of microbial and plant precursors, and make up a significant fraction of natural organic matter in terrestrial and aquatic environments. Humic substances are redox-active and can act as terminal electron acceptors in anaerobic microbial respiration. Reduced humic substances may become re-oxidized during aeration of temporarily anoxic systems, such as wetlands, sediments and many soils. If the transfer of electrons from anaerobic respiration through humic substances to oxygen is sustained over many redox cycles, it may competitively suppress electron transfer to carbon dioxide, and thereby lower the formation of methane in temporarily anoxic systems. Here, we monitor changes in the redox states of four chemically distinct dissolved humic substances over successive cycles of reduction by the bacterium Shewanella oneidensis MR-1 and oxidation by oxygen, in a series of laboratory experiments. We show that electron transfer to and from these substances is fully reversible and sustainable over successive redox cycles. We suggest that redox cycling of humic substances may largely suppress methane production in temporarily anoxic systems.

  17. Separation of humic acids from Bayer process liquor by membrane filtration

    SciTech Connect

    Awadalla, F.T.; Kutowy, O.; Tweddle, A. ); Hazlett, J.D. )

    1994-05-01

    Humic acids of high molecular weight were removed from spent Bayer liquor by polymeric ultrafiltration membranes. Among the commercial and laboratory-cast membranes tested, Radel-R polyphenylsulfone on a polypropylene backing material was found to be the most promising candidate for this separation. However, the maximum separation of humic acids obtained at operating conditions of 50[degree]C and 0.34 MPa, as measured by spectrophotometric analysis, was only in the 50 to 55% range. In order to explain this limited membrane separation of humic acids in spent Bayer liquor, a synthetic alkaline solution of humic acids was treated using the same membranes. These tests indicated much higher separation of humic acids (92%). Humic substances in Bayer liquor appear to be hydrolyzed and degraded to low molecular weight fractions (molecular weight < 1000 daltons) by the combined action of the strongly alkaline Bayer liquor and high digestion temperatures. These low molecular weight fractions cannot be retained by standard ultrafiltration membranes. However, some preliminary tests with laboratory-cast Radel-R nanofiltration membranes showed improved color separation (> 70%) when treating spent Bayer liquor. 23 refs., 8 figs., 5 tabs.

  18. Isolation of the stable fraction (the core) of the humic acid.

    PubMed

    Adani, Fabrizio; Ricca, Giuliana; Tambone, Fulvia; Genevini, Pierluigi

    2006-11-01

    Humic acid consists of a recalcitrant (unhydrolysed fraction) (the core) and labile (hydrolysable fraction) fraction. Core-humic acid (core-HA) isolation was performed by treating source material with apolar and polar solvents (organic solvents+acid hydrolysis) before alkaline extraction. Leonardite, soil Ah horizont and dry blood were chosen for this study because of their different origin and degree of humification. Chemical analysis (elemental analysis, total acidity, E(4):E(6)), spectroscopic analysis (DRIFT and (1)H NMR), and complete mass balance were used to investigate the effect of purifying humic acids. The results obtained showed that purification produced a slight modification of Leonardite humic acids as was expected for these highly humified organic matrices. On the other hand, about 500 g kg(-1) of soil humic acids were lost by purification. The fractions lost mainly consisted of carbohydrates. Dry blood showed the presence of humic acids that contrasted with its origin, thus indicating the limitations of the common analytical methods used for HA extraction. Nevertheless, in practice, purification caused the complete disappearance (914 g kg(-1) of HA was lost) of these HAs. The results obtained in this work suggest that the HA fraction isolated (named core-HA) effectively represents the HA structure proposed by the existing literature, since the purification proposed was able to eliminate the adsorbed organic molecules (interference materials) coating the HA structure. PMID:16735055

  19. Humic fractions of forest, pasture and maize crop soils resulting from microbial activity

    PubMed Central

    Tavares, Rose Luiza Moraes; Nahas, Ely

    2014-01-01

    Humic substances result from the degradation of biopolymers of organic residues in the soil due to microbial activity. The objective of this study was to evaluate the influence of three different ecosystems: forest, pasture and maize crop on the formation of soil humic substances relating to their biological and chemical attributes. Microbial biomass carbon (MBC), microbial respiratory activity, nitrification potential, total organic carbon, soluble carbon, humic and fulvic acid fractions and the rate and degree of humification were determined. Organic carbon and soluble carbon contents decreased in the order: forest > pasture > maize; humic and fulvic acids decreased in the order forest > pasture=maize. The MBC and respiratory activity were not influenced by the ecosystems; however, the nitrification potential was higher in the forest than in other soils. The rate and degree of humification were higher in maize soil indicating greater humification of organic matter in this system. All attributes studied decreased significantly with increasing soil depth, with the exception of the rate and degree of humification. Significant and positive correlations were found between humic and fulvic acids contents with MBC, microbial respiration and nitrification potential, suggesting the microbial influence on the differential formation of humic substances of the different ecosystems. PMID:25477932

  20. Bioactivity of chemically transformed humic matter from vermicompost on plant root growth.

    PubMed

    Dobbss, Leonardo Barros; Pasqualoto Canellas, Luciano; Lopes Olivares, Fábio; Oliveira Aguiar, Natália; Peres, Lázaro Eustáquio Pereira; Azevedo, Mariana; Spaccini, Riccardo; Piccolo, Alessandro; Façanha, Arnoldo R

    2010-03-24

    Chemical reactions (hydrolysis, oxidation, reduction, methylation, alkyl compounds detachment) were applied to modify the structure of humic substances (HS) isolated from vermicompost. Structural and conformational changes of these humic derivatives were assessed by elemental analyses, size exclusion chromatography (HPSEC), solid-state nuclear magnetic resonance ((13)C CPMAS-NMR), and diffusion ordered spectroscopy (DOSY-NMR), whereas their bioactivity was evaluated by changes in root architecture and proton pump activation of tomato and maize. All humic derivatives exhibited a large bioactivity compared to original HS, both KMnO(4)-oxidized and methylated materials being the most effective. Whereas no general relationship was found between bioactivity and humic molecular sizes, the hydrophobicity index was significantly related with proton pump stimulation. It is suggested that the hydrophobic domain can preserve bioactive molecules such as auxins in the humic matter. In contact with root-exuded organic acids the hydrophobic weak forces could be disrupted, releasing bioactive compounds from humic aggregates. These findings were further supported by the fact that HS and all derivatives used in this study activated the auxin synthetic reporter DR5::GUS. PMID:20232906

  1. Sorption of {sup 60}Co, {sup 85}Sr, {sup 137}Cs, {sup 237}Np and {sup 241}Am on soil under coexistence of humic acid: Effects of molecular size of humic acid

    SciTech Connect

    Tanaka, Tadao; Senoo, Muneaki

    1995-12-31

    Sorption experiments have been performed by a batch method, to study the effects of humic acid of different molecular size on the complexing stability with {sup 60}Co, {sup 85}Sr, {sup 137}Cs, {sup 237}Np and {sup 241}Am, and on the sorption behavior of these radionuclides on a sandy soil. Equilibrium constants K in the sorption of {sup 137}Cs and {sup 237}Np onto the soil were not changed at different concentrations of humic acid since {sup 137}Cs and {sup 237}Np do not interact with humic acid, while those of {sup 60}Co and {sup 241}Am decreased with increasing humic acid concentration due to forming humic complexes. However, the K of {sup 85}Sr was not changed at different humic acid concentrations, despite {sup 85}Sr interacts with humic acid. This contradiction was probably caused from that a main binding of {sup 85}Sr with humic acid is not based on coordination bond but electrostatic force, due to relatively high concentration of non-radioactive strontium. The theoretical sorption model taking account of the interaction of {sup 60}Co and {sup 241}Am with humic acid could well reproduce the values of K for each radionuclide at different concentrations of humic acid. Concentration profiles of the radionuclides in each size fraction of the solution before and after the sorption experiments were examined by ultrafiltration technique. The reduction of concentration of {sup 60}Co in the fraction less than 300,000 of cutoff molecular weight (MW) and that of concentration of {sup 241}Am in the fraction larger than 100,000MW, respectively, by the sorption onto the soil decreased with increasing humic acid concentration. This decrease resulted in the decrease in the K of {sup 60}Co and {sup 241}Am with increasing humic acid concentration.

  2. Investigation of the Effect of Humic Acids on Phototransformation of Naphthalene Illuminated by Visible and UV Light

    NASA Astrophysics Data System (ADS)

    Nechaev, L. V.; Tchaikovskaya, O. N.

    2016-04-01

    Results of investigation of the effect of humic acids on the degree of photochemical transformation of naphthalene in an aqueous solution illuminated by model solar and UV light are presented. The constant of complexation of naphthalene and humic acids is determined. It is established that the molecular complex of the humic acid and naphthalene is more stable to illumination by UV light then by model sunlight.

  3. Humic acids: Characterization and interactions in natural and wastewater systems. (Latest citations from Pollution Abstracts database). Published Search

    SciTech Connect

    Not Available

    1993-09-01

    The bibliography contains citations concerning the absorptive and complexation properties of humic and fulvic acids. Characterization and the occurrence of these acids in wastewater systems and natural systems are studied. The interaction of humic substances with metallic pollutants and chlorinated hydrocarbons, and removal of humic acids by precipitation are among the topics discussed. Wastewater treatment processes are discussed in separate bibliographies. (Contains 250 citations and includes a subject term index and title list.)

  4. Humic acids: Characterization and interactions in natural and wastewater systems. (Latest citations from Pollution abstracts). Published Search

    SciTech Connect

    1995-11-01

    The bibliography contains citations concerning the absorptive and complexation properties of humic and fulvic acids. Characterization and the occurrence of these acids in wastewater systems and natural systems are studied. The interaction of humic substances with metallic pollutants and chlorinated hydrocarbons, and removal of humic acids by precipitation are among the topics discussed. Wastewater treatment processes are discussed in separate bibliographies. (Contains 50-250 citations and includes a subject term index and title list.) (Copyright NERAC, Inc. 1995)

  5. Humic acids: Characterization and interactions in natural and wastewater systems. (Latest citations from Pollution abstracts). Published Search

    SciTech Connect

    Not Available

    1993-11-01

    The bibliography contains citations concerning the absorptive and complexation properties of humic and fulvic acids. Characterization and the occurrence of these acids in wastewater systems and natural systems are studied. The interaction of humic substances with metallic pollutants and chlorinated hydrocarbons, and removal of humic acids by precipitation are among the topics discussed. Wastewater treatment processes are discussed in separate bibliographies. (Contains 250 citations and includes a subject term index and title list.)

  6. Influence of humic acid on the toxicity of copper, cadmium and lead to the unicellular alga, Synechosystis aquatilis

    SciTech Connect

    Shanmukhappa, H.; Neelakantan, K. )

    1990-06-01

    Humic acids are known to play a significant role in phytoplankton productivity by regulating the trace metals required for plant growth. Although few attempts have been made to evaluate the influence of humic acids on heavy metal toxicity to aquatic organisms, their interaction in natural waters is well documented. The present study was undertaken to evaluate the influence of humic acids (HA) extracted from mangrove sediments on Cu, Cd and Pb toxicity to the unicellular alga, Synechosystis aquatilis.

  7. Synthetic humic substances and their use for remediation of contaminated environments

    NASA Astrophysics Data System (ADS)

    Dudare, Diana; Klavins, Maris

    2014-05-01

    Soils are increasingly subjected to different chemical stresses, because of increasing industrialization process and other factors. Different anthropogenic compounds (organic or inorganic in nature) upon entering the soil, may not only influence its productivity potential, but may also affect the quality of groundwater and food chain. Consequently, soils of different environments contain a complex mixture of contaminants, such as oil products, metals, organic solvents, acids, bases and radionuclides. Thereby greater focus should be paid to risk assessment and evaluation of remedial techniques in order to restore the quality of the soil and groundwater. The treatment technologies presently used to remove contaminants are physical, chemical and biological technologies. Many functional groups in the structure of humic substances determine their ability to interact with metal ions forming stable complexes and influencing speciation of metal ions in the environment, as well mobility, behaviour and speciation forms in the environment. Humic substances are suggested for use in the remediation of environments contaminated with metals, owing to complex forming properties. Several efforts have been undertaken with respect to synthesize humic substances for their structural studies. At the same time the real number of methods suggested for synthesis of humic substances is highly limited and their synthesis in general has been used mostly for their structural analysis. The present study deals with development of approaches for synthesis of humic substances with increased complex forming ability in respect to metal ions. Industrially produced humic substances (TEHUM) were used for comparison and after their modification their properties were analyzed for their elemental composition; functional group content changes in spectral characteristics. Synthetic humic substances showed significant differences in the number of functional groups and in ability to interact with the metal

  8. Frequency-domain fluorescence lifetime measurements via frequency segmentation and recombination as applied to pyrene with dissolved humic materials.

    PubMed

    Marwani, Hadi M; Lowry, Mark; Xing, Baoshan; Warner, Isiah M; Cook, Robert L

    2009-01-01

    In this study, the association behavior of pyrene with different dissolved humic materials (DHM) was investigated utilizing the recently developed segmented frequency-domain fluorescence lifetime method. The humic materials involved in this study consisted of three commercially available International Humic Substances Society standards (Suwannee River fulvic acid reference, SRFAR, Leonardite humic acid standard, LHAS, and Florida peat humic acid standard, FPHAS), the peat derived Amherst humic acid (AHA), and a chemically bleached Amherst humic acid (BAHA). It was found that the three commercial humic materials displayed three lifetime components, while both Amherst samples displayed only two lifetime components. In addition, it was found that the chemical bleaching procedure preferentially removed red wavelength emitting fluorophores from AHA. In regards to pyrene association with the DHM, different behavior was found for all commercially available humics, while AHA and BAHA, which displayed strikingly similar behavior in terms of fluorescence lifetimes. It was also found that there was an enhancement of pyrene's measured lifetime (combined with a decrease in pyrene emission) in the presence of FPHAS. The implications of this long lifetime are discussed in terms of (1) quenching mechanism and (2) use of the fluorescence quenching method used to determine the binding of compounds to DHM. PMID:18546063

  9. Carbon-13 nuclear magnetic resonance analysis, lignin content and carbohydrate composition of humic substances from salt marsh estuaries

    NASA Astrophysics Data System (ADS)

    Alberts, James J.; Hatcher, Patrick G.; Price, Mary T.; Filip, Zdenek

    13C nuclear magnetic resonance spectroscopy, CuO oxidation products of lignin and hydrolyzable carbohydrates were measured for fulvic and humic acids extracted from living and dead Spartina alterniflora and salt marsh sediments. With these methods, there was little evidence for early diagenetic alteration of the humic materials. No trends consistent for fulvic and humic acids were observed for either hydrolyzable carbohydrates or lignin derived phenols, and chemical measurements of these fractions did not agree with spectral estimates. Humic acids appear to contain secondary amide linkages typical of proteins and peptides.

  10. River-derived humic substances as iron chelators in seawater

    PubMed Central

    Krachler, Regina; Krachler, Rudolf F.; Wallner, Gabriele; Hann, Stephan; Laux, Monika; Cervantes Recalde, Maria F.; Jirsa, Franz; Neubauer, Elisabeth; von der Kammer, Frank; Hofmann, Thilo; Keppler, Bernhard K.

    2015-01-01

    The speciation of iron(III) in oxic seawater is dominated by its hydrolysis and sedimentation of insoluble iron(III)-oxyhydroxide. As a consequence, many oceanic areas have very low iron levels in surface seawater which leads to iron deficiency since phytoplankton require iron as a micronutrient in order to grow. Fortunately, iron solubility is not truly as low as Fe(III) solubility measurements in inorganic seawater would suggest, since oceanic waters contain organic molecules which tend to bind the iron and keep it in solution. Various iron-binding organic ligands which combine to stabilize dissolved iron have been detected and thoroughly investigated in recent years. However, the role of iron-binding ligands from terrestrial sources remains poorly constrained. Blackwater rivers supply large amounts of natural organic material (NOM) to the ocean. This NOM (which consists mainly of vascular plant-derived humic substances) is able to greatly enhance iron bioavailability in estuaries and coastal regions, however, breakdown processes lead to a rapid decrease of river-derived NOM concentrations with increasing distance from land. It has therefore been argued that the influence of river-derived NOM on iron biogeochemistry in offshore seawater does not seem to be significant. Here we used a standard method based on 59Fe as a radiotracer to study the solubility of Fe(III)-oxyhydroxide in seawater in the presence of riverine NOM. We aimed to address the question how effective is freshwater NOM as an iron chelator under open ocean conditions where the concentration of land-derived organic material is about 3 orders of magnitude smaller than in coastal regions, and does this iron chelating ability vary between NOM from different sources and between different size fractions of the river-borne NOM. Our results show that the investigated NOM fractions were able to substantially enhance Fe(III)-oxyhydroxide solubility in seawater at concentrations of the NOM ≥ 5

  11. Lanthanides in humic acids of soils, paleosols and cultural horizons (Southern Urals, Russia)

    NASA Astrophysics Data System (ADS)

    Dergacheva, Maria; Nekrasova, Olga

    2013-04-01

    In recent years, commercial interest in this element group increases. As consequence, their content may increase in environment, including soil and soil components. This requires quantitative estimations of rare metal accumulation by soils and their humic acids. The latter began to be actively used as fertilizers and it is alarming, because information about rare element participation (including lanthanides) in metabolism of live organisms is inconsistent. There was investigated lanthanide content in humic acids extracted from humus horizons of different objects of archaeological site Steppe 7 (Southern Urals, Russia). Humic acids were extracted from modern background soils and paleosols and cultural horizons of the Bronze Age as well. According to archaeological data burial of paleosols under a barrow and formation of the cultural layer (CL) took place 3600 and 3300-3200 years BP, respectively. The area of the site is located in the forest-steppe landscape, far from industrial plants. Lanthanides in soils are immobile elements, and such number of objects will allow to receive information about their content changing over time and to have more detailed basis for the future monitoring of this territory as well. Humic acids were precipitated from 0,1 n NaOH extraction after preliminary decalcification. Cleaning of humic acid preparations by 6N HCl or HF+HCl was not carried out. Determination of La, Ce, Sm, Eu, Tb, Yb and Lu was performed by multi-element neutron-activation analysis. According to carried out diagnostics and reconstruction of natural conditions of all object formation, all objects correspond to steppe type landscape with a different level of humidity. Analysis of received data has shown that cerium is presented in humic acid preparations in the largest quantities among lanthanides (on average 4,0-6,6 mg/kg of preparation mass). The average content of samarium, europium, ytterbium and lutetium in the humic acids in the order of magnitude ranges from 0

  12. Chronic bioassays of chlorinated humic acids in B6C3F1 mice

    SciTech Connect

    van Duuren, B.L.; Melchionne, S.; Seidman, I.; Pereira, M.A.

    1986-11-01

    Humic acids (Fluka), chlorinated to carbon:chlorine (C:Cl) ratios of 1:1 and 1:0.3, were administered to B6C3F1 mice, 50 males and 50 females per group, in the drinking water at a total organic carbon (TOC) level of 0.5 g/L. The mice were 6 to 8 weeks old at the beginning of the bioassays. The doses used were based on short-term (8 weeks) evaluations for toxicity, palatability, and weight gain. The chronic bioassays included the following control groups: unchlorinated humic acids (0.5 g/L), no-treatment (100 males and 100 females), dibromoethane (DBE, 2.0 mM in drinking water; positive control) and 0.44% sodium chloride in drinking water, i.e., at the same concentration as those receiving chlorinated humic acids. The chlorinated humic acids were prepared freshly and chemically assayed once per week. All chemicals were, with the exception of DBE, administered for 24 months; DBE was administered for 18 months. The volumes of solutions consumed were measured once weekly. All treatment groups showed normal weight gain except the DBE group. No markedly significant increases in tumor incidences were evident in any of the organs and tissues examined in the chlorinated humic acid groups compared to unchlorinated humic acids and the no-treatment control groups. DBE caused the expected high incidence of squamous carcinomas of the forestomach. The chlorinated humic acids tested contained direct-acting alkylating agents, based on their reactivity with p-nitrobenzylpyridine (PNBP), and showed mutagenic activity in S. typhimurium.

  13. Phytoremediation of Cu and Zn by vetiver grass in mine soils amended with humic acids.

    PubMed

    Vargas, Carmen; Pérez-Esteban, Javier; Escolástico, Consuelo; Masaguer, Alberto; Moliner, Ana

    2016-07-01

    Phytoremediation of contaminated mine soils requires the use of fast-growing, deep-rooted, high-biomass, and metal-tolerant plants with the application of soil amendments that promote metal uptake by plants. A pot experiment was performed to evaluate the combined use of vetiver grass (Chrysopogon zizanioides) and humic acid for phytoremediation of Cu and Zn in mine soils. Vetiver plants were grown in soil samples collected from two mine sites of Spain mixed with a commercial humic acid derived from leonardite at doses of 0, 2, 10, and 20 g kg(-1). Plant metal concentrations and biomass were measured and metal bioavailability in soils was determined by a low molecular weight organic acid extraction. Results showed that humic acid addition decreased organic acid-extractable metals in soil. Although this extraction method is used to estimate bioavailability of metals, it was not a good estimator under these conditions due to competition with the strong chelators in the added humic acid. High doses of humic acid also promoted root growth and increased Cu concentrations in plants due to formation of soluble metal-organic complexes, which enhanced removal of this metal from soil and its accumulation in roots. Although humic acid was not able to improve Zn uptake, it managed to reduce translocation of Zn and Cu to aerial parts of plants. Vetiver resulted unsuitable for phytoextraction, but our study showed that the combined use of this species with humic acid at 10-20 g kg(-1) could be an effective strategy for phytostabilization of mine soils. PMID:27030238

  14. Distribution of radioactivity in the chondrichthyes Squalus acanthias and the osteichthyes salmo gairdneri following intragastric administration of (9-/sup 14/C)phenanthrene

    SciTech Connect

    Solbakken, J.E.; Palmork, K.H.

    1980-12-01

    The fate of polycyclic hydrocarbons (PAH) in marine animals has received increasing attention in the last decade. The present studies dealing with spiny dogfish (Squalus acanthias) and rainbow trout (Salmo gairdneri) are part of a series of experiments with different marine organisms. All the experiments were performed under the same laboratory conditions using intragastric administration of the PAH-component, /sup 14/C-labelled phenanthrene. Thus it is possible to compare species differences of disposition of PAH in various marine organisms. The most pronounced differences in the disposition of phenanthrene between bony fish and cartilaginous fish in our studies are that the maximum value of radioactivity in the liver of cartilaginous fish occurred several days later than the corresponding value in bony fish. Furthermore, the radioactivity in cartilaginous fish was retained at a high level beyond 672 h (28 days), a time at which the radioactivity in bony fish is near the background values.

  15. Phenanthrenes, 9,10-dihydrophenanthrenes, bibenzyls with their derivatives, and malate or tartrate benzyl ester glucosides from tubers of Cremastra appendiculata.

    PubMed

    Wang, Yang; Guan, Shu-Hong; Meng, Yu-Hui; Zhang, Yi-Bei; Cheng, Chun-Ru; Shi, Yang-Yang; Feng, Rui-Hong; Zeng, Feng; Wu, Zhi-Yuan; Zhang, Jing-Xian; Yang, Min; Liu, Xuan; Li, Qing; Chen, Xiao-Hui; Bi, Kai-Shun; Guo, De-An

    2013-10-01

    Eleven previously unknown compounds and 23 known compounds, including 20 phenanthrene or 9,10-dihydrophenanthrene derivatives, five bibenzyls, seven malate or tartrate benzyl ester glucosides, adenosine and gastrodin were isolated from tubers of Cremastra appendiculata. Among the obtained compounds, two are the first isolated dimers with one phenanthrene or bibenzyl unit connected to C-3 of 2,3,4,5-tetrahydro-phenanthro[2,1-b]furan moiety. In addition, 33 of these compounds were evaluated in vitro for their cytotoxic activity against two cancer cell lines. Among the compounds examined, one compound showed moderate cytotoxic activity, while five showed weak cytotoxic activity against the A549 cell line. PMID:23820314

  16. Investigating the mechanism of phenol photooxidation by humic substances.

    PubMed

    Golanoski, Kelli S; Fang, Shuo; Del Vecchio, Rossana; Blough, Neil V

    2012-04-01

    To probe the mechanism of the photosensitized loss of phenols by humic substances (HS), the dependence of the initial rate of 2,4,6-trimethylphenol (TMP) loss (R(TMP)) on dioxygen concentration was examined both for a variety of untreated as well as borohydride-reduced HS and C(18) extracts from the Delaware Bay and Mid-Atlantic Bight. R(TMP) was inversely proportional to dioxygen concentration at [O(2)] > 50 μM, a dependence consistent with reaction with triplet excited states, but not with (1)O(2) or RO(2). Modeling the dependence of R(TMP) on [O(2)] provided rate constants for TMP reaction, O(2) quenching, and lifetimes compatible with a triplet intermediate. Borohydride reduction significantly reduced TMP loss, supporting the role of aromatic ketone triplets in this process. However, for most samples, the incomplete loss of sensitization following borohydride reduction, as well as the inverse dependence of R(TMP) on [O(2)] for these samples, suggests that there remains another class of oxidizing triplet sensitizer, perhaps quinones. PMID:22394372

  17. Sorption of humic acids and alpha-endosulfan by clayminerals

    SciTech Connect

    Hengpraprom, S.; Lee, C.M.; Coates, R.T.

    2005-02-18

    Sorption of alpha-endosulfan by kaolinite andmontmorillonite alone and in the presence of sorbed and dissolved humicacid (HA) was investigated (pH 8 and 25oC). Three types of HA, Elliotsoil HA (EHA), Peat HA (PHA), and Summit Hill HA (SHHA), were used torepresent typical humic substances found in soils. For sorption of HA byeither mineral, Freundlich sorption coefficient (Kf) values appeared todecrease in the order of EHA>PHA>SHHA, which followedincreasing polarity (expressed as the O/C atomic ratio) and decreasingpercent-carbon content. For both clays, sorption of alpha-endosulfan bythe HA mineral complex was greater than for sorption by the clay alone.Sorption of alpha-endosulfan by the HA mineral complexes followed thesame order as the Kf of the HAs (EHA>PHA>SHHA). Based on theamount of HA adsorbed by each mineral, organic carbon partitioncoefficients (KOC) were determined for sorption of alpha-endosulfan bytwo of the HA mineral complexes. The value of KOC for alpha-endosulfansorption was greater for kaolinite EHA than kaolinite SHHA. However, theopposite trend was found with the montmorillonite HA complexes.Montmorillonite appeared to sorb alpha-endosulfan and/or HA with higheraffinity than kaolinite, which likely is due to its 2:1 layer structureand higher surface area. Sorption of endosulfan diol, a hydrolysisproduct, by the minerals was much less than the parentpesticide.

  18. Uranium Adsorption on Ferrihydrite - Effects of Phosphate and Humic Acid

    USGS Publications Warehouse

    Payne, T.E.; Davis, J.A.; Waite, T.D.

    1996-01-01

    Uranium adsorption on ferrihydrite was studied as a function of pH in systems equilibrated with air, in the presence and absence of added phosphate and humic acid (HA). The objective was to determine the influence of PO43- and HA on uranium uptake. Below pH 7, the sorption of UO22+ typically increases with increasing pH (the 'low pH sorption edge'), with a sharp decrease in sorption above this pH value (the 'high pH edge'). The presence of ??PO43- of 10-4 mol/L moved the low pH edge to the left by approximately 0.8 pH units. The PO43- was strongly bound by the ferrihydrite surface, and the increased uptake of U was attributed to the formation of ternary surface complexes involving both UO22+ and PO43-. The addition of HA (9 mg/L) increased U uptake at pH values below 7, with little effect at higher pH values. The positions of the pH edges were also affected by the ionic strength and total U content. These experiments show that sorption interactions involving PO43 and HA must be considered in order to model the behavior of U in natural systems, in which these components are often present.

  19. Influence of humic acid applications on soil physicochemical properties

    NASA Astrophysics Data System (ADS)

    Gümüş, İ.; Şeker, C.

    2015-09-01

    Soil structure is often said to be the key to soil productivity since a fertile soil, with desirable soil structure and adequate moisture supply, constitutes a productive soil. Soil structure influences soil water movement and retention, erosion, crusting, nutrient recycling, root penetration and crop yield. The objective of this work is to study, humic acid (HA) application on some physical and chemical properties in weak structured soils investigated. The approach involved establishing a plot experiment in the laboratory conditions. Different rates of HA (control, 0.5, 1, 2 and 4 %) were applied to soil at three incubation periods (21, 42 and 62 days). At the end of the each incubation period, the changes in physicochemical properties were measured. Generally, HA addition increased EC values at the all incubation periods. HA applications decreased soil modulus of rupture. Application of HA at the rate of 4 % was significantly increased soil organic carbon contents. HA applications at the rate of 4 % significantly increased both mean soil total nitrogen content and aggregate stability after at three incubation periods (p < 0.05). Therefore, HA was potential to improve structure of soil in short term.

  20. Bromoform formation in ozonated groundwater containing bromide and humic substances

    SciTech Connect

    Cooper, W.J.; Amy, G.L.; Moore, C.A.; Zika, R.G.

    1986-01-01

    The effect of bromide ion, organic carbon concentration (natural aquatic humic substances), pH, and solar irradiation on the formation of bromoform in ozonated groundwater has been studied. The studies were conducted on four unique samples of groundwater taken from different regions of the Biscayne Aquifer in southern Florida. All other conditions being equal, increases in bromide ion concentrations resulted in increases in CHBr/sub 3/ formation. In three of the four samples, CHBr/sub 3/ formation decreased as the pH level increased from 5 to 9. The fourth sample exhibited an opposite trend whereby the CHBr/sub 3/ concentration increased with increasing pH. Bromoform concentration increased with increased O/sub 3/ concentration over an ozone dosage range of 3.4 to 6.7 mg/L. Ozonated samples placed in sunlight immediately after ozone addition showed a decrease in the formation of CHBr/sub 3/ presumably due to the photodecomposition of HOBr/OBr.

  1. Effect of humic substances on phosphorus removal by struvite precipitation.

    PubMed

    Zhou, Zhen; Hu, Dalong; Ren, Weichao; Zhao, Yuzeng; Jiang, Lu-Man; Wang, Luochun

    2015-12-01

    Humic substances (HS) are a major fraction of dissolved organic matters in wastewater. The effect of HS on phosphorus removal by struvite precipitation was investigated using synthetic wastewater under different initial pH values, Mg/P molar ratios and HS concentrations. The composition, morphology and thermal properties of harvested precipitates were analyzed by X-ray diffraction (XRD), scanning electron microscope (SEM) and thermo-gravimetric analysis (TGA), respectively. It showed that inhibition effect of HS reached its maximum value of 48.9% at pH 8.0, and decreased to below 10% at pH>9.0. The increase of Mg/P ratio enhanced phosphorus removal efficiency, and thus reduced the influence of HS on struvite precipitation. At pH 9.0, the inhibitory effect of initial HS concentration matched the modified Monod model with half maximum inhibition concentration of 356mgL(-1), and 29% HS was removed in conjunction with struvite crystallisation. XRD analysis revealed that the crystal form of struvite precipitates was changed in the presence of HS. The morphology of harvested struvite was transformed from prismatic to pyramid owing to the coprecipitation of HS on crystal surface. TGA results revealed that the presence of HS could compromise struvite purity. PMID:26151483

  2. Comparative evaluation of humic substances in oral drug delivery.

    PubMed

    Mirza, Mohd Aamir; Ahmad, Niyaz; Agarwal, Suraj Prakash; Mahmood, Danish; Khalid Anwer, M; Iqbal, Z

    2011-05-01

    Major and biologically most explored components of natural organic matter (NOM) are humic acid (HA) and fulvic acid (FA). We have explored rock shilajit as a source of NOM. On the other hand carbamazepine (CBZ) is a well known anticonvulsant drug and has a limited accessibility to brain. Bioavailability and pharmacokinetic profiles of CBZ have been improved by complexation and different techniques also. Present study has assessed the comparative abilities of FA and HA as complexing agent for CBZ in order to enhance pharmacokinetic profile of CBZ and accessibility to the brain. These two complexing agents have been compared on various indices such as their abilities to cause complexation and enhance solubility, permeability and dissolution. The present study also compared pharmacodynamic and biochemical profiles after oral administration of complexes. With the help of various pharmaceutical techniques such as freeze drying, physical mixture, kneading and solvent evaporation, two molar ratios (1:1 and 1:2) were selected for complexation and evaluated for conformational analysis (molecular modeling). Complex formed was further characterized by differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FT-IR), mass spectroscopy and X-ray diffraction (XRD). Preclinical study on rodents with CBZ-HA and CBZ-FA has yielded appreciable results in terms of their anticonvulsant and antioxidants activities. However, CBZ-HA (1:2) demonstrated better result than any other complex. PMID:25755978

  3. Effects of acid rain on soil humic compounds.

    PubMed

    Calace, N; Fiorentini, F; Petronio, B M; Pietroletti, M

    2001-06-21

    The modifications induced by acid rain on the solubility, molecular configuration and molecular weight distribution of humic (HA) and fulvic (FA) acids were studied. A natural soil was subjected to simulated acid rain until a soil pH of 4 was obtained; HA and FA acids were then extracted and characterised. The results obtained were compared both with those of natural soil and with those of a soil subjected to acid rain. Elute analysis indicates the continuous release of soluble organic compounds as a consequence of acid rain simulation, although no relationship was found with the process of soil acidification. The yields of HA and FA show that HA values are the same while FA amount is higher in the natural soil; in acid soils their water solubility increases. The molecular weight distribution shows that HA consist of a mixture of compounds of different molecular weights; they are molecules for the most part larger than 100 kDa and their distribution is not changed by soil acidification. FA can be considered to form a much more homogeneous system; in natural soil, the molecules are larger than 50 kDa, while in acidified soil they are for the most part smaller than 3 kDa. PMID:18968306

  4. Effect of humic acid (HA) on sulfonamide sorption by biochars.

    PubMed

    Lian, Fei; Sun, Binbin; Chen, Xi; Zhu, Lingyan; Liu, Zhongqi; Xing, Baoshan

    2015-09-01

    Effect of quantity and fractionation of loaded humic acid (HA) on biochar sorption for sulfonamides was investigated. The HA was applied in two different modes, i.e. pre-coating and co-introduction with sorbate. In pre-coating mode, the polar fractions of HA tended to interact with low-temperature biochars via H-bonding, while the hydrophobic fractions were likely to be adsorbed by high-temperature biochars through hydrophobic and π-π interactions, leading to different composition and structure of the HA adlayers. The influences of HA fractionation on biochar sorption for sulfonamides varied significantly, depending on the nature of interaction between HA fraction and sorbate. Meanwhile, co-introduction of HA with sulfonamides revealed that the effect of HA on sulfonamide sorption was also dependent on HA concentration. These findings suggest that the amount and fractionation of adsorbed HA are tailored by the surface properties of underlying biochars, which differently affect the sorption for organic contaminants. PMID:26057361

  5. Prion Protein Interaction with Soil Humic Substances: Environmental Implications

    PubMed Central

    Giachin, Gabriele; Narkiewicz, Joanna; Scaini, Denis; Ngoc, Ai Tran; Margon, Alja; Sequi, Paolo; Leita, Liviana; Legname, Giuseppe

    2014-01-01

    Transmissible spongiform encephalopathies (TSE) are fatal neurodegenerative disorders caused by prions. Animal TSE include scrapie in sheep and goats, and chronic wasting disease (CWD) in cervids. Effective management of scrapie in many parts of the world, and of CWD in North American deer population is complicated by the persistence of prions in the environment. After shedding from diseased animals, prions persist in soil, withstanding biotic and abiotic degradation. As soil is a complex, multi-component system of both mineral and organic components, it is important to understand which soil compounds may interact with prions and thus contribute to disease transmission. Several studies have investigated the role of different soil minerals in prion adsorption and infectivity; we focused our attention on the interaction of soil organic components, the humic substances (HS), with recombinant prion protein (recPrP) material. We evaluated the kinetics of recPrP adsorption, providing a structural and biochemical characterization of chemical adducts using different experimental approaches. Here we show that HS act as potent anti-prion agents in prion infected neuronal cells and in the amyloid seeding assays: HS adsorb both recPrP and prions, thus sequestering them from the prion replication process. We interpreted our findings as highly relevant from an environmental point of view, as the adsorption of prions in HS may affect their availability and consequently hinder the environmental transmission of prion diseases in ruminants. PMID:24937266

  6. Comparative evaluation of humic substances in oral drug delivery

    PubMed Central

    Mirza, Mohd. Aamir; Ahmad, Niyaz; Agarwal, Suraj Prakash; Mahmood, Danish; Khalid Anwer, M.; Iqbal, Z.

    2011-01-01

    Major and biologically most explored components of natural organic matter (NOM) are humic acid (HA) and fulvic acid (FA). We have explored rock shilajit as a source of NOM. On the other hand carbamazepine (CBZ) is a well known anticonvulsant drug and has a limited accessibility to brain. Bioavailability and pharmacokinetic profiles of CBZ have been improved by complexation and different techniques also. Present study has assessed the comparative abilities of FA and HA as complexing agent for CBZ in order to enhance pharmacokinetic profile of CBZ and accessibility to the brain. These two complexing agents have been compared on various indices such as their abilities to cause complexation and enhance solubility, permeability and dissolution. The present study also compared pharmacodynamic and biochemical profiles after oral administration of complexes. With the help of various pharmaceutical techniques such as freeze drying, physical mixture, kneading and solvent evaporation, two molar ratios (1:1 and 1:2) were selected for complexation and evaluated for conformational analysis (molecular modeling). Complex formed was further characterized by differential scanning calorimetry (DSC), Fourier transform infrared spectroscopy (FT-IR), mass spectroscopy and X-ray diffraction (XRD). Preclinical study on rodents with CBZ–HA and CBZ–FA has yielded appreciable results in terms of their anticonvulsant and antioxidants activities. However, CBZ–HA (1:2) demonstrated better result than any other complex. PMID:25755978

  7. Synthesis of 9,10-Phenanthrenes via Palladium-Catalyzed Aryne Annulation by o-Halostyrenes and Formal Synthesis of (±)-Tylophorine.

    PubMed

    Yao, Tuanli; Zhang, Haiming; Zhao, Yanna

    2016-06-01

    A novel palladium-catalyzed annulation reaction of in situ generated arynes and o-halostyrenes has been developed. This methodology affords moderate to excellent yields of substituted phenanthrenes and is tolerant of a variety of functional groups such as nitrile, ester, amide, and ketone. This annulation chemistry has been successfully applied to the formal total synthesis of a biologically active alkaloid (±)-tylophorine. PMID:27188401

  8. Relevant role of dissolved humic matter in phosphorus bioavailability in natural and agronomical ecosystems through the formation of Humic-(Metal)-Phosphate complexes

    NASA Astrophysics Data System (ADS)

    Baigorri, Roberto; Urrutia, Óscar; Erro, Javier; Pazos-Pérez, Nicolás; María García-Mina, José

    2016-04-01

    Natural Organic Matter (NOM) and the NOM fraction present in soil solution (dissolved organic matter: DOM) are currently considered as fundamental actors in soil fertility and crop mineral nutrition. Indeed, decreases in crop yields as well as soil erosion are closely related to low values of NOM and, in fact, the use of organic amendments as both soil improvers and plant growth enhancers is very usual in countries with soils poor in NOM. This role of NOM (and DOM) seems to be associated with the presence of bio-transformed organic molecules (humic substances) with high cation chelating-complexing ability. In fact, bioavailable micronutrients with metallic character in soil solutions of alkaline and calcareous soils are forming stable complexes with DOM. This beneficial action of DOM also concerns other plant nutrients such as inorganic phosphate (Pi). Among the different mechanisms involved in the beneficial action of DOM on P bioavailability, the possible formation of poly-nuclear complexes including stable chemical bonds between negative binding sites in humic substances and Pi through metal bridges in soil solution might be relevant, especially in acidic soils. In fact, several studies have proven that these complexes can be obtained in the laboratory and are very efficient in prevent Pi soil fixation and improve Pi root uptake. However, clear experimental evidence about their presence in soil solutions of natural and agronomical soil ecosystems has not published yet. We present here experimental results supporting the real presence of stable Pi-metal-Humic (PMH) complexes in the soil solution of several acidic soils. The study is based on the physico-chemical characterization (31P-NMR, FTIR, TEM-EDAX, ICP-OES) of the DOM fraction isolated by ultrafiltration from the soil solution of several representative acidic soils. In average, more than 60 % of Pi was found in the soil solution humic fraction forming stable humic-metal (Fe, Al) complexes.

  9. Evaluating the sorption of organophosphate esters to different sourced humic acids and its effects on the toxicity to Daphnia magna.

    PubMed

    Pang, Long; Liu, Jingfu; Yin, Yongguang; Shen, Mohai

    2013-12-01

    Because of large usage as flame retardants and additives, organophosphate esters (OPEs) are widely detected in the environment and regarded as emerging contaminants. However, the sorption of OPEs to organic matter and its effects have scarcely been studied. In the present study, the sorption of 9 commonly used OPEs to 4 representative humic acids--Elliott Soil humic acid, Suwannee River humic acid, Aldrich humic acid, and Acros humic acid--in the range of 0 mg/L to 50 mg/L dissolved organic carbon (DOC), was evaluated with negligible-depletion solid-phase microextraction and verified by its impacts on the toxicity to the aquatic invertebrate Daphnia magna. Whereas OPEs with a high octanol/water partition coefficient (log K(OW)=4.51-6.64) were associated with humic acids mainly by hydrophobic interaction with DOC partition coefficient (K(DOC)) in the range of 10²·²² to 10⁵·³¹, the sorption of low-K(OW) OPEs (log K(OW)=-0.65 to 2.59) to humic acids was not hydrophobic interaction-dominant, with K(DOC) in the range of 10³·⁴⁷ to 10⁴·²⁹. These results were corroborated by the effects of humic acids on the acute toxicity of 3 high-K(OW) OPEs to D. magna. The sorption of OPEs to Suwannee River humic acid was weak and had negligible effects on the toxicity of high-K(OW) OPEs; the presence of terrestrial Acros humic acid (50 mg/L DOC), however, significantly decreased the toxicity by 53% to 60%. The results indicated that the strong sorption between high-K(OW) OPEs and terrestrial humic acid might affect their transportation and bioavailability. PMID:23966232

  10. Bacteria capable of degrading anthracene, phenanthrene, and fluoranthene as revealed by DNA based stable-isotope probing in a forest soil.

    PubMed

    Song, Mengke; Jiang, Longfei; Zhang, Dayi; Luo, Chunling; Wang, Yan; Yu, Zhiqiang; Yin, Hua; Zhang, Gan

    2016-05-01

    Information on microorganisms possessing the ability to metabolize different polycyclic aromatic hydrocarbons (PAHs) in complex environments helps in understanding PAHs behavior in natural environment and developing bioremediation strategies. In the present study, stable-isotope probing (SIP) was applied to investigate degraders of PAHs in a forest soil with the addition of individually (13)C-labeled phenanthrene, anthracene, and fluoranthene. Three distinct phylotypes were identified as the active phenanthrene-, anthracene- and fluoranthene-degrading bacteria. The putative phenanthrene degraders were classified as belonging to the genus Sphingomona. For anthracene, bacteria of the genus Rhodanobacter were the putative degraders, and in the microcosm amended with fluoranthene, the putative degraders were identified as belonging to the phylum Acidobacteria. Our results from DNA-SIP are the first to directly link Rhodanobacter- and Acidobacteria-related bacteria with anthracene and fluoranthene degradation, respectively. The results also illustrate the specificity and diversity of three- and four-ring PAHs degraders in forest soil, contributes to our understanding on natural PAHs biodegradation processes, and also proves the feasibility and practicality of DNA-based SIP for linking functions with identity especially uncultured microorganisms in complex microbial biota. PMID:26808242

  11. Short-Term Rhizosphere Effect on Available Carbon Sources, Phenanthrene Degradation, and Active Microbiome in an Aged-Contaminated Industrial Soil

    PubMed Central

    Thomas, François; Cébron, Aurélie

    2016-01-01

    Over the last decades, understanding of the effects of plants on soil microbiomes has greatly advanced. However, knowledge on the assembly of rhizospheric communities in aged-contaminated industrial soils is still limited, especially with regard to transcriptionally active microbiomes and their link to the quality or quantity of carbon sources. We compared the short-term (2–10 days) dynamics of bacterial communities and potential PAH-degrading bacteria in bare or ryegrass-planted aged-contaminated soil spiked with phenanthrene, put in relation with dissolved organic carbon (DOC) sources and polycyclic aromatic hydrocarbon (PAH) pollution. Both resident and active bacterial communities (analyzed from DNA and RNA, respectively) showed higher species richness and smaller dispersion between replicates in planted soils. Root development strongly favored the activity of Pseudomonadales within the first 2 days, and of members of Actinobacteria, Caulobacterales, Rhizobiales, and Xanthomonadales within 6–10 days. Plants slowed down the dissipation of phenanthrene, while root exudation provided a cocktail of labile substrates that might preferentially fuel microbial growth. Although the abundance of PAH-degrading genes increased in planted soil, their transcription level stayed similar to bare soil. In addition, network analysis revealed that plants induced an early shift in the identity of potential phenanthrene degraders, which might influence PAH dissipation on the long-term. PMID:26903971

  12. Variability of humic acid properties depending on their precursor material: a study of peat profiles

    NASA Astrophysics Data System (ADS)

    Klavins, Maris; Purmalis, Oskars

    2015-04-01

    Analysis of variation of peat composition, presence of trace elements in the peat and HSs within peat profiles can give information on the character of transformation of organic matter, important for C biogeochemical cycling, but also about impacts of climate change and human activities. In peat the transformation and decay process of living organic matter (humification) is retarded by the acidic and anaerobic environment, but at the same time the peat can provide information on environmental and paleo-environmental conditions of the past. The aim of the present study is to analyze the elemental and functional composition, spectral characteristics of humic acids isolated from a well characterized raised bog peat profiles to evaluate the impact of the character of humification processes on the peat HA properties. A comparative and complex characterization of humic acids (HAs) isolated from peat profiles of different origin in Latvia was carried out. Elemental and functional analysis of the isolated HAs was done, their acidity and molecular weights estimated. Spectral characterization included UV-Vis, IR, and electron spin resonance and fluorescence spectra. Structural characterization of HAs was by both 1H and 13C nuclear magnetic resonance spectra. Comparison of position of studied humic acids in the Van Krevelen graph was done, thus locating them in the biogeochemical transformation processes of organic matter. Properties of HAs isolated from the Latvian peat were compared with HA from other sources (soil, water, coal and synthetic humic substances). Major properties of peat HAs depended on their origin, indicating the importance of humification processes. HAs isolated from peat of more recent origin were more similar to soil HAs, but from older sources there was a greater degree of humification. Changes of surface tension of solutions of humic acids stress the differences in aggregation character - ability to form supramacromolecular complexes of humic substances

  13. Mechanisms for the suppression of methane production in peatland soils by a humic substance analog

    NASA Astrophysics Data System (ADS)

    Ye, R.; Keller, J. K.; Jin, Q.; Bohannan, B. J. M.; Bridgham, S. D.

    2014-01-01

    Methane (CH4) production is often impeded in many northern peatland soils, although inorganic terminal electron acceptors (TEAs) are usually present in low concentrations in these soils. Recent studies suggest that humic substances in wetland soils can be utilized as organic TEAs for anaerobic respiration and may directly inhibit CH4 production. Here we utilize the humic analog anthraquinone-2, 6-disulfonate (AQDS) to explore the importance of humic substances, and their effects on the temperature sensitivity of anaerobic decomposition, in two peatland soils. In a bog peat, AQDS was not instantly utilized as a TEA, but greatly inhibited the fermentative production of acetate, carbon dioxide (CO2), and hydrogen (H2), as well as CH4 production. When added together with glucose, AQDS was partially reduced after a lag period of 5 to 10 days. In contrast, no inhibitory effect of AQDS on fermentation was found in a fen peat and AQDS was readily reduced as an organic TEA. The addition of glucose and AQDS to both bog and fen peats caused complicated temporal dynamics in the temperature sensitivity of CH4 production, reflecting temporal changes in the temperature responses of other carbon processes with effects on methanogenesis. Our results show that the humic analog AQDS can act both as an inhibitory agent and a TEA in peatland soils. The high concentrations of humic substances in northern peatlands may greatly influence the effect of climate change on soil carbon cycling in these ecosystems.

  14. Structure-Property-Function Relationship in Humic Substances to Explain the Biological Activity in Plants

    PubMed Central

    García, Andrés Calderín; de Souza, Luiz Gilberto Ambrosio; Pereira, Marcos Gervasio; Castro, Rosane Nora; García-Mina, José María; Zonta, Everaldo; Lisboa, Francy Junior Gonçalves; Berbara, Ricardo Luis Louro

    2016-01-01

    Knowledge of the structure-property-function relationship of humic substances (HSs) is key for understanding their role in soil. Despite progress, studies on this topic are still under discussion. We analyzed 37 humic fractions with respect to their isotopic composition, structural characteristics, and properties responsible for stimulating plant root parameters. We showed that regardless of the source of origin of the carbon (C3 or C4), soil-extracted HSs and humic acids (HAs) are structurally similar to each other. The more labile and functionalized HS fraction is responsible for root emission, whereas the more recalcitrant and less functionalized HA fraction is related to root growth. Labile structures promote root stimulation at lower concentrations, while recalcitrant structures require higher concentrations to promote a similar stimulus. These findings show that lability and recalcitrance, which are derived properties of humic fractions, are related to the type and intensity of their bioactivity. In summary, the comparison of humic fractions allowed a better understanding of the relationship between the source of origin of plant carbon and the structure, properties, and type and intensity of the bioactivity of HSs in plants. In this study, scientific concepts are unified and the basis for the agronomic use of HSs is established. PMID:26862010

  15. The impact of humic acid on chromium phytoextraction by aquatic macrophyte Lemna minor.

    PubMed

    Kalčíková, Gabriela; Zupančič, Marija; Jemec, Anita; Gotvajn, Andreja Žgajnar

    2016-03-01

    Studies assessing chromium phytoextration from natural waters rarely consider potential implications of chromium speciation in the presence of ubiquitous humic substances. Therefore, the present study investigated the influence of environmentally relevant concentration of humic acid (TOC = 10 mg L(-1)) on chromium speciation (Cr = 0.15 mg L(-1)) and consequently on phytoextraction by aquatic macrophyte duckweed Lemna minor. In absence of humic acid, only hexavalent chromium was present in water samples and easily taken up by L. minor. Chromium uptake resulted in a significant reduction of growth rate by 22% and decrease of chlorophyll a and chlorophyll b contents by 48% and 43%, respectively. On the other hand, presence of humic acid significantly reduced chromium bioavailability (57% Cr uptake decrease) and consequently it did not cause any measurable effect to duckweed. Such effect was related to abiotic reduction of hexavalent chromium species to trivalent. Hence, findings of our study suggest that presence of humic acid and chromium speciation cannot be neglected during phytoextraction studies. PMID:26766370

  16. Humic substances and nitrogen-containing compounds from low rank brown coals

    SciTech Connect

    Demirbas, A.; Kar, Y.; Deveci, H.

    2006-03-15

    Coal is one of the sources of nitrogen-containing compounds (NCCs). Recovery of NCCs from brown coals in high yield was carried out from tars of stepwise semicoking of brown coals. Humic acids have been shown to contain many types of nitrogen compounds. Humic acids are thought to be complex aromatic macromolecules with amino acids, amino sugars, peptides, and aliphatic compounds that are involved in the linkages between the aromatic groups. Humic acids extracted from peats, brown coals, and lignites, are characterized using different techniques. Humic substances (HSs) have several known benefits to agriculture. The properties of humic substances vary from source to source, because they are heterogeneous mixtures of biochemical degradation products from plant and animal residues, and synthesis activities of microorganisms. HSs have been considered to be a significant floculant in surface water filtration plants for the production of drinking water as well as the processing of water. HSs are produced from chemical and biological degradation of plant and animal residues and from synthetic activities of microorganisms.

  17. Structural transition in the humic matrix of soil gels and the electrical resistivity of soils

    NASA Astrophysics Data System (ADS)

    Fedotov, G. N.; Shoba, S. A.

    2015-11-01

    The structural organization of the organic matrix of humic substances in soils has been analyzed, and the conclusion has been drawn that the existence of humic matrix is determined by contacts between the hydrophilic sites of humic particles in dry soils and between their hydrophobic sites in wet soils. It follows from the advanced supposition that the wetting-drying process should cause a structural transition (reorganization of the humic matrix), which should affect the properties of soils. To verify this supposition, the effect of soil moisture on the electrical resistivity of soil-water extracts, suspensions, and pastes has been studied. It follows from the studies performed that soil electrolytes are fixed in dry soils during drying and are gradually released into solution. However, beginning from a specific soil water content, the release of electrolytes occurs almost immediately after their contact with water. The obtained data suggest that an energy barrier should be overcome for the release of electrolytes from the soils with water content below the specific limit. There is no energy barrier for the soils with water content higher than this limit. The existence of structural transition in the humic matrix of soil gels well explains these results. The effect of energetic impacts on the structural transition has been studied. It has been shown that the study of structural transition should avoid operations that increase the number and amplitude of energy fluctuations in the systems.

  18. Potential origin and formation for molecular components of humic acids in soils

    NASA Astrophysics Data System (ADS)

    DiDonato, Nicole; Chen, Hongmei; Waggoner, Derek; Hatcher, Patrick G.

    2016-04-01

    Soil humic acids are the base soluble/acid insoluble organic components of soil organic matter. Most of what we know about humic acids comes from studies of their bulk molecular properties or analysis of individual fractions after extraction from soils. This work attempts to better define humic acids and explain similarities and differences for several soils varying in degrees of humification using advanced molecular level techniques. Our investigation using electrospray ionization coupled to Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICR-MS) and nuclear magnetic resonance spectroscopy (NMR) has given new insight into the distinctive molecular characteristics of humic acids which suggest a possible pathway for their formation. Humic acids from various ecosystems, climate regions and soil textural classes are distinguished by the presence of three predominant molecular components: lignin-like molecules, carboxyl-containing aliphatic molecules and condensed aromatic molecules that bear similarity to black carbon. Results show that humification may be linked to the relative abundance of these three types of molecules as well as the relative abundance of carboxyl groups in each molecular type. This work also demonstrates evidence for lignin as the primary source of soil organic matter, particularly condensed aromatic molecules often categorized as black carbon and is the first report of the non-pyrogenic source for these compounds in soils. We also suggest that much of the carboxyl-containing aliphatic molecules are sourced from lignin.

  19. High Pressure Size Exclusion Chromatography (HPSEC) of humic substances: molecular sizes, analytical parameters, and column performance

    PubMed

    Conte; Piccolo

    1999-02-01

    High Pressure Size Exclusion chromatography (HPSEC) is increasingly used to evaluate molecular sizes of humic substances from different sources. Asymmetry factors (As), number of theoretical plates (N), coefficient of distribution (k(d)), and column resolution (Rs) were determined for two different HPSEC columns (TSK G3000SW and Biosep S2000) and polysaccharides of known molecular weights were used as standards. Calibration curves were equivalent for both columns whereas analytical parameters revealed that the TSK column was only slightly more efficient in separating polysaccharide standards. Mw and Mn values for humic substances differed according to the molecular weight range of each column but relative standard deviation never exceeded 5% for both columns. Variations between columns were attributed to intrinsic humic properties such as the stability of conformational structures. These results suggested that humic substances in solutions are loosely-bound association of small molecules that may be consistently dispersed by diffusion through size-exclusion pores. HPSEC is confirmed to represent a highly precise method to evaluate the relative molecular-size distribution of dissolved humic substances. PMID:10901671

  20. Influence of phosphate ions on buffer capacity of soil humic acids

    NASA Astrophysics Data System (ADS)

    Boguta, P.; Sokołowska, Z.

    2012-02-01

    The object of this study was to determine change of natural buffer capacity of humic acids by strong buffering agents, which were phosphate ions. Studies were carried out on the humic acids extracted from peat soils. Additional information was obtained by determination of water holding capacity, density, ash and pH for peats and optical parameter Q4/6 for humic acids. Humic acid suspensions exhibited the highest buffer properties at low pH and reached maximum at pH ~ 4. Phosphates possessed buffer properties in the pH range from 4.5 to 8.0. The maximum of buffering was at pH~6.8 and increased proportionally with an increase in the concentration of phosphate ions. The study indicated that the presence of phosphate ions may strongly change natural buffer capacity of humic acids by shifting buffering maximum toward higher pH values. Significant correlations were found for the degree of the secondary transformation with both the buffer capacity and the titrant volume used during titration.

  1. Characteristics of Soil Humic Substances as Determined by Conventional and Synchrotron Fourier Transform Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Wang, S.; Song, X. Y.; Wang, N.; Li, C. X.; Wang, W.; Zhang, J. J.

    2014-11-01

    Humic substances (HS) play an important role in soil fertility and carbon sequestration in soil. The structural characteristics of soil HS, extracted from two natural soils and a laboratory-incubated soil, were investigated by conventional beamline-based Fourier transform infrared radiation (CB-FTIR), a common FTIR technique based on a conventional thermal source, and synchrotron radiation-based (SR-FTIR) spectroscopy. The relative area of absorbance peaks that appeared at 2930, 2860, 1711, and 1635 cm-1 were calculated to make a comparison of the absorbance intensities. The absorption of aromatic functional groups of HS was stronger in SR-FTIR spectroscopy than in CB-FTIR spectroscopy. Compared with humic acid extracted with a 0.1 mol/l Na4P2O7 solution, the level of aliphaticity in humic acid extracted with a 0.1 mol/l NaOH solution was higher. The aliphaticity of humin associated with clay (HMc) was higher than that of humin associated with iron (HMi). These results suggest that SR-FTIR spectroscopy is a useful and nondestructive technique to study the structural characteristics of soil humic substances. Sequential extraction of soil humic substances with NaOH and Na4P2O7 solutions may be helpful in providing additional information in cases where differences in the material obtained from different extraction solutions occur. The aliphaticity and complexity of HMc were higher than those of HMi.

  2. Structure-Property-Function Relationship in Humic Substances to Explain the Biological Activity in Plants.

    PubMed

    García, Andrés Calderín; de Souza, Luiz Gilberto Ambrosio; Pereira, Marcos Gervasio; Castro, Rosane Nora; García-Mina, José María; Zonta, Everaldo; Lisboa, Francy Junior Gonçalves; Berbara, Ricardo Luis Louro

    2016-01-01

    Knowledge of the structure-property-function relationship of humic substances (HSs) is key for understanding their role in soil. Despite progress, studies on this topic are still under discussion. We analyzed 37 humic fractions with respect to their isotopic composition, structural characteristics, and properties responsible for stimulating plant root parameters. We showed that regardless of the source of origin of the carbon (C3 or C4), soil-extracted HSs and humic acids (HAs) are structurally similar to each other. The more labile and functionalized HS fraction is responsible for root emission, whereas the more recalcitrant and less functionalized HA fraction is related to root growth. Labile structures promote root stimulation at lower concentrations, while recalcitrant structures require higher concentrations to promote a similar stimulus. These findings show that lability and recalcitrance, which are derived properties of humic fractions, are related to the type and intensity of their bioactivity. In summary, the comparison of humic fractions allowed a better understanding of the relationship between the source of origin of plant carbon and the structure, properties, and type and intensity of the bioactivity of HSs in plants. In this study, scientific concepts are unified and the basis for the agronomic use of HSs is established. PMID:26862010

  3. Carbon isotope composition of dissolved humic and fulvic acids in the Tokachi River system.

    PubMed

    Nagao, Seiya; Kodama, Hiroki; Aramaki, Takafumi; Fujitake, Nobuhide; Uchida, Masao; Shibata, Yasuyuki

    2011-07-01

    This study reports carbon isotopic ratios (Δ(14)C and δ(13)C) of dissolved humic and fulvic acids in the Tokachi River system, northern Japan. These acids have a refractory feature and they represent the largest fraction of dissolved organic matter in aquatic environments. The acids were isolated using the XAD extraction method from river water samples collected at three sites (on the upper and lower Tokachi River, and from one of its tributaries) in June 2004 and 2005. δ(13)C values were -27.8 to -26.9 ‰ for humic and fulvic acids. On the other hand, the Δ(14)C values ranged from -247 to +26 ‰ and the average values were -170 ± 79 ‰ for humic acid and -44 ± 73 ‰ for fulvic acid. The difference was attributed to the residence time of fulvic acid in the watershed being shorter than that of humic acid. The large variation suggested that humic substances have a different pathway in each watershed environment. PMID:21515623

  4. Investigation of adsorptive fractionation of humic acid on graphene oxide using fluorescence EEM-PARAFAC.

    PubMed

    Lee, Bo-Mi; Seo, Young-Soo; Hur, Jin

    2015-04-15

    In this study, the adsorptive fractionation of a humic acid (HA, Elliott soil humic acid) on graphene oxide (GO) was examined at pH 4 and 6 using absorption spectroscopy and fluorescence excitation-emission matrix (EEM)-parallel factor analysis (PARAFAC). The extent of the adsorption was greater at pH 4.0 than at pH 6.0. Aromatic molecules within the HA were preferentially adsorbed onto the GO surface, and the preferential adsorption was more pronounced at pH 6, which is above the zero point of charge of GO. A relative ratio of two PARAFAC humic-like components (ex/em maxima at 270/510 nm and at (250, 265)/440 nm) presented an increasing trend with larger sizes of ultrafiltered humic acid fractions, suggesting the potential for using fluorescence EEM-PARAFAC for tracking the changes in molecular sizes of aromatic HA molecules. The individual adsorption behaviors of the two humic-like components revealed that larger sized aromatic components within HA had a higher adsorption affinity and more nonlinear isotherms compared to smaller sized fractions. Our results demonstrated that adsorptive fractionation of HA occurred on the GO surface with respect to their aromaticity and the sizes, but the degree was highly dependent on solution pH as well as the amount of adsorbed HS (or available surface sites). The observed adsorption behaviors were reasonably explained by a combination of different mechanisms previously suggested. PMID:25682051

  5. Pb(II) binding to humic substances: an equilibrium and spectroscopic study.

    PubMed

    Orsetti, Silvia; Marco-Brown, Jose L; Andrade, Estela M; Molina, Fernando V

    2013-08-01

    The binding of Pb(II) to humic acids is studied through an approach combining equilibrium and spectroscopic measurements. The methods employed are potentiometric and fluorometric titrations, fluorescence excitation-emission matrices (EEM) and IR spectroscopy. Potentiometric titration curves are analyzed using the NICA equations and an electrostatic model treating the humic particles as an elastic polyelectrolyte network. EEMs are analyzed using parallel factor analysis, decomposing the signal in its independent components and finding their dependence on Pb(II) activity. Potentiometric results are consistent with bimodal affinity distributions for Pb(II) binding, whereas fluorometric titrations are explained by monomodal distributions. EEM analysis is consistent with three independent components in the humic fluorescence response, which are assigned to moieties with different degree of aromaticity. All three components show a similar quenching behavior upon Pb(II) binding, saturating at relatively low Pb(II) concentrations. This is attributed to metal ion induced aggregation of humic molecules, resulting in the interaction between the aromatic groups responsible for fluorescence; this is also consistent with IR spectroscopy results. The observed behavior is interpreted considering that initial metal binding (observed as strongly binding sites), correspond to bi- or multidentate complexation to carboxylate groups, including binding between groups of different humic molecules, promoting aggregation; further metal ions (observed as weakly binding sites) bind to single ligand groups. PMID:23805795

  6. Identification and characterization of humic substances-degrading bacterial isolates from an estuarine environment.

    PubMed

    Esham; Ye; Moran

    2000-12-01

    Bacterial isolates were obtained from enrichment cultures containing humic substances extracted from estuarine water using an XAD-8 resin. Eighteen isolates were chosen for phylogenetic and physiological characterization based on numerical importance in serial dilutions of the enrichment culture and unique colony morphology. Partial sequences of the 16S rRNA genes indicated that six of the isolates were associated with the alpha subclass of Proteobacteria, three with the gamma-Proteobacteria, and nine with the Gram-positive bacteria. Ten isolates degraded at least one (and up to six) selected aromatic single-ring compounds. Six isolates showed ability to degrade [(14)C]humic substances derived from the dominant salt marsh grass in the estuary from which they were isolated (Spartina alterniflora), mineralizing 0.4-1.1% of the humic substances over 4 weeks. A mixture of all 18 isolates did not degrade humic substances significantly faster than any of the individual strains, however, and no isolate degraded humic substances to the same extent as the natural marine bacterial community (3.0%). Similar studies with a radiolabeled synthetic lignin ([beta-(14)C]dehydropolymerisate) showed measurable levels of degradation by all 18 bacteria (3.0-8.8% in 4 weeks), but mineralization levels were again lower than that observed for the natural marine bacterial community (28.2%). Metabolic capabilities of the 18 isolates were highly variable and generally did not map to phylogenetic affiliation. PMID:11102687

  7. Investigation of metal ions binding of humic substances using fluorescence emission and synchronous-scan spectroscopy.

    PubMed

    Piana, M J; Zahir, K O

    2000-01-01

    The binding site interactions of IHSS humic substances, Suwannee River Humic Acid, Suwannee River Fulvic Acid, Nordic Fulvic Acid, and Aldrich Humic Acid with various metals ions and a herbicide, methyl viologen were investigated using fluorescence emission and synchronous-scan spectroscopy. The metal ions used were, Fe(III), Cr(III), Cr(VI), Pb(II), Cu(II) and Ni(II). Stern-Volmer constants, Ksv for these quenchers were determined at pH 4 and 8 using an ionic strength of 0.1 M. For all four humic substances, and at both pH studied, Fe(III) was found to be the most efficient quencher. Quenching efficiency was found to be 3-10 times higher at pH 8. The bimolecular quenching rate constants were found to exceed the maximum considered for diffusion controlled interactions, and indicate that the fluorophore and quencher are in close physical association. Synchronous-scan spectra were found to change with pH and provided useful information on binding site interactions between humic substances and these quenchers. PMID:10693057

  8. On-the-fly fluorescence lifetime detection of humic substances in capillary electrophoresis.

    PubMed

    Hewitt, Joseph D; McGown, Linda B

    2003-03-01

    On-the-fly fluorescence lifetime detection was investigated as a tool for studying humic substances in capillary zone electrophoresis (CZE). Humic substances are complex, heterogeneous mixtures of natural products that tend to migrate in a single, broad CZE peak. The intrinsic fluorescence lifetime of five humic substances from the International Humic Substances Society (IHSS) was monitored using excitation at 488 or 364 nm to produce intensity-lifetime electropherograms for each of the substances. Each frequency-domain lifetime measurement, collected at subsecond intervals during the CZE run, contains the equivalent of a complete decay profile. Lifetime analysis of each decay profile was used to construct a lifetime-resolved electropherogram for each lifetime component, from which the variation in relative intensity contributions of each lifetime across the broad CZE peak could be determined. Absorption spectra, fluorescence excitation-emission spectra, and lifetime profiles of batch solutions of the samples were determined as well. It was found that, whereas absorption and fluorescence spectral characteristics tended to discriminate between humic acids and fulvic acids, the batch solution lifetime profiles discriminated instead between samples from different sources, regardless of fraction. On-the-fly lifetime detection provided a more detailed view of the fluorescence decay of the samples, including greater resolution of lifetimes for two of the fulvic acids and greater discrimination among samples based on lifetime profiles across the CZE peaks. PMID:14658616

  9. Structure-Property-Function Relationship in Humic Substances to Explain the Biological Activity in Plants

    NASA Astrophysics Data System (ADS)

    García, Andrés Calderín; de Souza, Luiz Gilberto Ambrosio; Pereira, Marcos Gervasio; Castro, Rosane Nora; García-Mina, José María; Zonta, Everaldo; Lisboa, Francy Junior Gonçalves; Berbara, Ricardo Luis Louro

    2016-02-01

    Knowledge of the structure-property-function relationship of humic substances (HSs) is key for understanding their role in soil. Despite progress, studies on this topic are still under discussion. We analyzed 37 humic fractions with respect to their isotopic composition, structural characteristics, and properties responsible for stimulating plant root parameters. We showed that regardless of the source of origin of the carbon (C3 or C4), soil-extracted HSs and humic acids (HAs) are structurally similar to each other. The more labile and functionalized HS fraction is responsible for root emission, whereas the more recalcitrant and less functionalized HA fraction is related to root growth. Labile structures promote root stimulation at lower concentrations, while recalcitrant structures require higher concentrations to promote a similar stimulus. These findings show that lability and recalcitrance, which are derived properties of humic fractions, are related to the type and intensity of their bioactivity. In summary, the comparison of humic fractions allowed a better understanding of the relationship between the source of origin of plant carbon and the structure, properties, and type and intensity of the bioactivity of HSs in plants. In this study, scientific concepts are unified and the basis for the agronomic use of HSs is established.

  10. Modeling electrostatic and heterogeneity effects on proton dissociation from humic substances

    USGS Publications Warehouse

    Tipping, E.; Reddy, M.M.; Hurley, M.A.

    1990-01-01

    The apparent acid dissociation constant of humic substances increases by 2-4 pK units as ionization of the humic carboxylate groups proceeds. This change in apparent acid strength is due in part to the increase in electrical charge on the humic molecules as protons are shed. In addition, proton dissociation reactions are complicated because humic substances are heterogeneous with respect to proton dissociating groups and molecular size. In this paper, we use the Debye-Hu??ckel theory to describe the effects of electrostatic interactions on proton dissociation of humic substances. Simulations show that, for a size-heterogeneous system of molecules, the weight-average molecular weight is preferable to the number-average value for averaging the effects of electrostatic interactions. Analysis of published data on the proton dissociation of fulvic acid from the Suwannee River shows that the electrostatic interactions can be satisfactorily described by a hypothetical homogeneous compound having a molecular weight of 1000 (similar to the experimentally determined weight-average value). Titration data at three ionic strengths, for several fulvic acid concentrations, and in the pH range from 2.9 to 6.4 can be fitted with three adjustable parameters (pK??int values), given information on molecular size and carboxylate group content. ?? 1990 American Chemical Society.

  11. In-line coagulation with quaternary amine polymer prior to microfiltration of humic-rich water.

    PubMed

    Kim, Hyun-Chul

    2015-12-01

    This work was designed to investigate the feasibility of using a low molecular-weight epichlorohydrin/dimethylamine (epi/DMA) polymer as a primary coagulant for the pretreatment of terrestrial humic-rich water prior to the microfiltration (MF) process, without removal of the flocs produced via the coagulation pretreatment. The main issue explored was the effects of different coagulation conditions on the particle characteristics that would also significantly affect the performance of membranes when filtering coagulated humic-rich water. The size distribution and morphological properties of flocs formed through the coagulation of humic-rich water were characterized and the impact of Ca(2+) on these characteristics that were associated with the performance of the MF membrane was also determined. Epi/DMA additions from 50% to 150% of the charge neutralization dose substantially decreased fouling compared to when filtering raw humic-rich water. Short-term fouling was increased when 1 mM Ca(2+) was added, but the charge neutralization coagulation removed almost all of the fouling tendency that had occurred when filtering Ca-humic solution. The median diameter and the fractal dimension of flocs produced were increased as the zeta potential reached close to zero, which resulted in the formation of a cake layer that was easily removed from the surface of the membrane. PMID:26283099

  12. Humic acid adsorption on fly ash and its derived unburned carbon.

    PubMed

    Wang, Shaobin; Zhu, Z H

    2007-11-01

    Fly ash is solid waste from combustion process, containing oxide minerals and unburned carbon. In this investigation, fly ash has been separated into metal oxide mineral section and unburned carbon. The fly ash with different contents of unburned carbon was employed for humic acid adsorption to investigate the influence of unburned carbon on adsorption. It is found that metal oxides and unburned carbon in fly ash exhibit significant difference in humic acid adsorption. The unburned carbon plays the major role in adsorption. Higher content of unburned carbon in fly ash results in higher surface area and thus higher humic acid adsorption. Fly ash and unburned carbon exhibit adsorption capacity of humic acid of 11 and 72 mg/g, respectively, at 30 degrees C, pH 7. Humic acid adsorption is also affected by ion strength, pH, and temperature. The thermodynamic calculations indicate that the adsorption is endothermic nature with DeltaH(0) and DeltaS(0) as 5.79 kJ/mol and 16.0 J/K mol, respectively. PMID:17628583

  13. Dissolution and Mobilization of Uranium in a Reduced Sediment by Natural Humic Substances under Anaerobic Conditions

    SciTech Connect

    Gu, Baohua; Luo, Wensui

    2009-01-01

    Biological reduction and precipitation of uranium (U) has been proposed as a remedial option for immobilizing uranium at contaminated sites, but the long-term stability and mobility of uranium remain a concern because it is neither removed nor destroyed. In this study, the dissolution and mobilization of reduced and oxidized forms of uranium [U(IV) and U(VI)] by natural humic substances were investigated in batch and column flow systems using a bioreduced sediment containing both U(IV) and U(VI). The addition of humic substances significantly increased the dissolution of U(IV) under anaerobic conditions. Humic acid (HA) was found to be more effective than fulvic acid (FA) in dissolving U(IV) in either 1 mM KCl or KHCO3 background solution. However, more U(VI) was dissolved in 1 mM KHCO3 than in 1 mM KCl background electrolytes. The HA also was found to be more effective than FA in mobilizing uranium under reducing and column flow conditions, although an accumulative amount of eluted U(VI) and U(IV) was relatively low (<60 g) after leaching with ~97 pore volumes of the humic solution in 1 mM KHCO3. These observations suggest that natural humic substances could potentially influence the long-term stability of bioreduced U(IV) even under strong reducing environments.

  14. Presence and potential significance of aromatic-ketone groups in aquatic humic substances

    USGS Publications Warehouse

    Leenheer, J.A.; Wilson, M.A.; Malcolm, R.L.

    1987-01-01

    Aquatic humic- and fulvic-acid standards of the International Humic Substances Society were characterized, with emphasis on carbonyl-group nature and content, by carbon-13 nuclear-magnetic-resonance spectroscopy, proton nuclear-magnetic-resonance spectroscopy, and infrared spectroscopy. After comparing spectral results of underivatized humic and fulvic acids with spectral results of chemically modified derivatives, that allow improved observation of the carbonyl group, the data clearly indicated that aromatic ketone groups comprised the majority of the carbonyl-group content. About one ketone group per monocyclic aromatic ring was determined for both humic and fulvic acids. Aromatic-ketone groups were hypothesized to form by photolytic rearrangements and oxidation of phenolic ester and hydrocarbon precursors; these groups have potential significance regarding haloform formation in water, reactivity resulting from active hydrogen of the methyl and methylene adjacent to the ketone groups, and formation of hemiketal and lactol structures. Aromatic-ketone groups also may be the point of attachment between aliphatic and aromatic moieties of aquatic humic-substance structure. ?? 1987.

  15. Impact of phenanthrene on the properties of biogeochemical interfaces in soil: A two-layer column study

    NASA Astrophysics Data System (ADS)

    Reichel, Katharina; Totsche, Kai Uwe

    2013-04-01

    Biogeochemical interfaces in soils (Totsche et al. 2010) are the "hot spots" of microbial activity and the processing of organic compounds in soils. The production and relocation of mobile organic matter (MOM) and biocolloids like microorganisms are key processes for the formation and depth propagation of biogeochemical interfaces in soils (BGI). Phenanthrene (PHE) has been shown to affect microbial communities in soils (Ding et al. 2012) and may induce shifts in MOM quantity and quality (amount, type and properties of MOM). We hypothesize that the properties of BGI in soil change significantly due to the presence of PHE. The objectives of this study are (i) to evaluate the effect of PHE on soil microbial communities and on MOM quantity and quality under flow conditions with single- and two-layer column experiments and (ii) to assess the role of these processes for the physicochemical, mechanical and sorptive properties of BGI in soils. The soil columns were operated under water-unsaturated conditions. The top layer (source layer, SL, 2 cm) is made of sieved soil material (Luvisol, Scheyern, Germany) spiked with PHE (0.2 mg/g). The bottom layer (reception layer, RL, 10 cm) comprised the same soil without PHE. PHE-free columns were conducted in parallel as reference. Release and transport of MOM in mature soil of a single-layer column experiment was found to depend on the transport regime. The release of larger sized MOM (>0.45 µm) was restricted to an increased residence time during flow interruptions. Steady flow conditions favor the release of smaller MOM (<0.45 µm). Compared to the reference, in the two-layer column experiments higher OC concentrations were detected in the effluent from PHE spiked columns after enhanced flow interruptions (26d, 52d). That indicated the PHE influenced production or mobilization of MOM. Parallel factor analysis of fluorescence excitation and emission matrices revealed the presence of a constant DOM background and two new unknown

  16. Binding of mercury(II) to aquatic humic substances: Influence of pH and source of humic substances

    USGS Publications Warehouse

    Haitzer, M.; Aiken, G.R.; Ryan, J.N.

    2003-01-01

    Conditional distribution coefficients (KDOM???) for Hg(II) binding to seven dissolved organic matter (DOM) isolates were measured at environmentally relevant ratios of Hg(II) to DOM. The results show that KDOM??? values for different types of samples (humic acids, fulvic acids, hydrophobic acids) isolated from diverse aquatic environments were all within 1 order of magnitude (1022.5??1.0-1023.5??1.0 L kg-1), suggesting similar Hg(II) binding environments, presumably involving thiol groups, for the different isolates. KDOM??? values decreased at low pHs (4) compared to values at pH 7, indicating proton competition for the strong Hg(II) binding sites. Chemical modeling of Hg(II)-DOM binding at different pH values was consistent with bidentate binding of Hg(II) by one thiol group (pKa = 10.3) and one other group (pKa = 6.3) in the DOM, which is in agreement with recent results on the structure of Hg(II)-DOM bonds obtained by extended X-ray absorption fine structure spectroscopy (EXAFS).

  17. Effects of Humic Acid and Sunlight on the Generation and Aggregation State of Aqu/C60 Nanoparticles

    EPA Science Inventory

    Aqueous suspensions of nanoscale C60 aggregates (aqu/C60) were produced by stirring in water with Suwanee River Humic Acid (humic acid) and water from Call’s Creek, a small stream near Athens, GA. Time course experiments were conducted to determine the effects of sunlight and sol...

  18. Relationships between structure and binding affinity of humic substances for polycyclic aromatic hydrocarbons: Relevance of molecular descriptors

    SciTech Connect

    Perminova, I.V.; Grechishcheva, N.Y.; Petrosyan, V.S.

    1999-11-01

    Partition coefficients for the binding affinities of pyrene, fluoranthene, and anthracene to 26 different humic materials were determined by fluorescence quenching. Sources included isolated humic acids, fulvic acids, and combined humic and fulvic fractions from soil, peat, and freshwater as well as Aldrich humic acid. Each of the humic materials was characterized by elemental composition, ultraviolet absorbance at 280 nm, molecular weight, and for 19 samples, composition of main structural fragments determined by {sup 13}C solution-state NMR. The magnitude of the K{sub oc} values correlated strongly with the independent descriptors of aromaticity of humic materials, including atomic H/C ratio, absorptivity at 280 nm, and three interdependent {sup 13}C NMR descriptors (C{sub Ar{minus}H,R}, {summation}C{sub Ar}, {summation}C{sub Ar}/{summation}C{sub Alk}). Statistical comparison of humic sources grouped by the origin revealed that binding affinities were best predicted by the {sup 13}C NMR descriptors. with a slight prevalence of {summation}C{sub Ar}/{summation}C{sub Alk} ration, while molecular weight was the poorest predictor. The latter produced either direct or inverse significant correlation with the K{sub oc} values depending upon the origin and/or fractional composition of the grouped humic materials.

  19. EFFECTS OF HUMIC ACID PURIFICATION ON INTERACTION WITH HYDROPHOBIC ORGANIC MATTER: EVIDENCE FROM FLUORESCENCE BEHAVIOR. (R822832)

    EPA Science Inventory

    Conventional isolation of humic materials from natural
    matrixes includes demineralization by treatment with HF/HCl. The possible effect of this on the structural integrity of
    humic acid (HA) was investigated by comparing the
    interactions of two aqueous HAs, one produc...

  20. FT-IR and C-13 NMR analysis of soil humic fractions from a long term cropping systems study

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increased knowledge of humic fractions is important due to its involvement in many soil ecosystem processes. Soil humic acid (HA) and fulvic acid (FA) from a nine-year agroecosystem study with different tillage, cropping system, and N source treatments were characterized using FT-IR andsolid-state ...