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Sample records for jararaca serpentes viperidae

  1. Phylogeography of the Bothrops jararaca complex (Serpentes: Viperidae): past fragmentation and island colonization in the Brazilian Atlantic Forest.

    PubMed

    Grazziotin, Felipe G; Monzel, Markus; Echeverrigaray, Sergio; Bonatto, Sandro L

    2006-11-01

    The Brazilian Atlantic Forest is one of the world's major biodiversity hotspots and is threatened by a severe habitat loss. Yet little is known about the processes that originated its remarkable richness of endemic species. Here we present results of a large-scale survey of the genetic variation at the mitochondrial cytochrome b gene of the pitviper, jararaca lancehead (Bothrops jararaca), and two closely related insular species (Bothrops insularis and Bothrops alcatraz), endemic of this region. Phylogenetic and network analyses revealed the existence of two well-supported clades, exhibiting a southern and a northern distribution. The divergence time of these two phylogroups was estimated at 3.8 million years ago, in the Pliocene, a period of intense climatic changes and frequent fragmentation of the tropical rainforest. Our data also suggest that the two groups underwent a large size expansion between 50,000 and 100,000 years ago. However, the southern group showed a more marked signal of population size fluctuation than the northern group, corroborating evidences that southern forests may have suffered a more pronounced reduction in area in the late Pleistocene. The insular species B. alcatraz and B. insularis presented very low diversity, each one sharing haplotypes with mainland individuals placed in different subclades. Despite their marked morphological and behavioural uniqueness, these two insular species seem to have originated very recently and most likely from distinct costal B. jararaca populations, possibly associated with late Pleistocene or Holocene sea level fluctuations. PMID:17054497

  2. [Hemolytic activity of venoms from snakes of the genera Bothrop, Lachesis, Crotalus, and Micrurus (Serpentes: Viperidae and Elapidae].

    PubMed

    Martínez Cadillo, E; Bonilla Ferreyra, C; Zvealeta, A

    1991-11-01

    Hemolytic activity of eight Peruvian snake venoms from the families Viperidae and Elapidae (Bothrops atrox, B. pictus, B. hyoprorus, B. bilineatus, B. neuwedii, Lachesis m. muta, Crotalus d. terrificus, Micrurus tschudi), and three Brazilian viperids (B. jararacussu, B. alternatus and C. d. collilineatus) is described. None of the venoms caused direct lysis on washed human erythrocytes. However, all of them caused indirect hemolysis provided that the incubation medium contains an exogenous source of lecithin. Venom of Micrurus tschudi was the most hemolytic (HD50 2.8 ug/ml) while that of B. bilineatus was the least (HD50 681.3 ug/ml). Only six of eleven venoms showed parallel curves of hemolytic activity, and the HD50 varied from 198 to 681 ug/ml and the following decreasing order of hemolytic activity was obtained: L. muta, C. d. terrificus, C. d. collilineatus, B. hyoprorus, B. bilineatus, B. alternatus. PMID:1844159

  3. Another new and threatened species of lancehead genus Bothrops (Serpentes, Viperidae) from Ilha dos Franceses, Southeastern Brazil.

    PubMed

    Barbo, Fausto E; Gasparini, João Luiz; Almeida, Antonio P; Zaher, Hussam; Grazziotin, Felipe G; Gusmão, Rodrigo B; Ferrarini, José Mário G; Sawaya, Ricardo J

    2016-01-01

    A new insular species of the genus Bothrops is described from Ilha dos Franceses, a small island off the coast of Espírito Santo State, in southeastern Brazil. The new species differs from mainland populations of B. jararaca mainly by its small size, relative longer tail, relative smaller head length, and relative larger eyes. The new species is distinguished from B. alcatraz, B. insularis and B. otavioi by the higher number of ventral and subcaudal scales, relative longer tail and smaller head. The new species is highly abundant on the island, being nocturnal, semiarboreal, and feeding on small lizards and centipeds. Due its unique and restricted area of occurrence, declining quality of habitat, and constant use of the island for tourism, the new species may be considered as critically endangered. PMID:27394563

  4. 'Serpent' Untouched

    NASA Technical Reports Server (NTRS)

    2004-01-01

    A drift dubbed 'Serpent' stretches in front of NASA's Mars Exploration Rover Spirit in this picture from the left eye of Spirit's front hazard-avoidance camera. Spirit took the image during its 71st martian day, or sol, on Mars (March 15, 2004) while exploring the rim of the crater nicknamed 'Bonneville.' The following sol, the rover used its wheels to dig into the drift and expose material under the surface.

  5. Is the population of Crotalus durissus (Serpentes, Viperidae) expanding in Brazil?

    PubMed Central

    2013-01-01

    Crotalus durissus are found from Mexico to northern Argentina in a highly disjunct distribution. According to some studies, this species is prone to occupy areas disturbed by human activities and floods comprise a plausible method of dispersal as inferred for some North American rattlesnakes. Based on the literature, it seems plausible that Crotalus durissus expanded their natural distribution in Brazil due to floods, but only in a few municipalities in Rio de Janeiro State. Data entries of Butantan Institute, in São Paulo, Brazil, from 1998 to 2012 show a declining tendency of snakes brought by donors. In addition, research shows no evidence of Crotalus durissus being an expanding species in the Brazilian territory. PMID:24314146

  6. Natural history of the terciopelo Bothrops asper (Serpentes: Viperidae) in Costa Rica.

    PubMed

    Sasa, Mahmood; Wasko, Dennis K; Lamar, William W

    2009-12-01

    The terciopelo Bothrops asper is the only lancehead species widely distributed in the humid lowlands of Middle America and northwestern South America. Its large body size, relative abundance and cryptic habits contribute to the high incidence of snakebites induced by this species throughout its distribution. The terciopelo plays an important role in ecosystems, both as prey and as a generalist predator. Diet comprises a great variety of prey items, including some species that are considered nuisances. B. asper, as other lancehead species, exhibits a notable ontogenetic shift in diet, consuming ectotherms (mainly frogs and lizards) when young, and increasingly incorporating birds, rodents, and other small mammals with maturity. Adult terciopelos also consume large anurans, especially when endothermic prey availability is low. Using radiotelemetry we determined home range and movement patterns from 28 individual B. asper at La Selva Biological Station, Costa Rica. Overall home range estimates are relatively small compared with other pitvipers, averaging between 3.71ha and 5.95ha; home range size did not differ between males and females. Movement patterns are largely aseasonal and consist of short (<10 m) movements between daytime shelter and nocturnal ambush sites within a given area, interspersed with longer distance (>50 m) movements to new foraging areas. Habitat use is related to prey availability and therefore to foraging strategy. Our data support a strong preference for areas near swamps by both sexes. Reproduction in B. asper is highly seasonal, and--apparently--biannual. Reproductive cycles in Costa Rica are tightly related to rainfall patterns. Therefore, the timing of breeding differs between populations in the Caribbean and Pacific lowlands. Bothrops asper is adapted to areas with low levels of disturbance along the agricultural frontier, and consequently it is not rare to find it in or near human dwellings. However, despite popular belief, no evidence supports a purported increase in population density of this species in Costa Rica. Despite human persecution and substantial modification of habitat, B. asper is a species with a conservation status of least concern, and probably will likely persist well into the future. Thus, it is important to learn how to coexist with this species, and to improve mechanisms for the prevention and treatment of accidental snakebite and its consequences. PMID:19563822

  7. [Neutralization of the hemorrhagic effect induced by Bothrops asper (Serpentes: Viperidae) venom with tropical plant extracts].

    PubMed

    Castro, O; Gutiérrez, J M; Barrios, M; Castro, I; Romero, M; Umaña, E

    1999-09-01

    Organic extracts representing 48 species included in 30 families of Costa Rican tropical plants were evaluated for their ability to neutralize hemorrhagic activity induced by the venom of the snake Bothrops asper. A bioassay in mice was used, based on intradermal injection of either venom or venom-extract mixtures followed by the measurement of hemorrhagic areas. Total inhibition of hemorrhage was observed with the ethanolic, ethyl acetate and aqueous extracts of Bursera simaruba, Clusia torresii, C. palmana, Croton draco, Persea americana, Phoebe brenesii, Pimenta dioica, Sapindus saponaria, Smilax cuculmeca and Virola koschnyi. Chemical analysis of these extracts identified catequines, flavones, anthocyanines and condensated tannins, which may be responsible for the inhibitory effect observed, probably owing to the chelation of the zinc required for the catalytic activity of venom's hemorrhagic metalloproteinases. PMID:10883329

  8. [Toxicity and neutralization of venoms from Peruvian snakes of the genera Bothrops and Lachesis (Serpentes: Viperidae)].

    PubMed

    Incio Ruiz, R; Incio Ruiz, L; Martínez-Vargas, A Z; Salas Arruz, M; Gutiérrez, J M

    1993-12-01

    The lethal potencies (Median Lethal Dose) of the venoms of Peruvian snakes (Bothrops atrox, Bothrops barnetti, Bothrops pictus and Lachesis muta muta) were determined in mice by using intravenous and intraperitoneal routes of injection. In addition, the neutralizing ability of three antivenoms (bothropic polyvalent, bothropic bivalent and lachetic) was studied by preincubation-type experiments. B. pictus venom had the highest lethality by the intraperitoneal route whereas B. atrox venom had the highest lethality when tested by the intravenous route. The three antivenoms were effective in neutralizing lethality of the homologous venoms. Bivalent antivenom was more effective than polyvalent antivenom in the neutralization of B. pictus venom. On the basis of these findings, the use of bivalent bothropic antivenom is recommended in the Pacific coastal regions of Perú, whereas polyvalent bothropic antivenom is recommended in the oriental jungle regions of the country. PMID:7701074

  9. The Evolutionary Implications of Hemipenial Morphology of Rattlesnake Crotalus durissus terrificus (Laurent, 1768) (Serpentes: Viperidae: Crotalinae)

    PubMed Central

    Porto, Marcovan; de Oliveira, Marco Antonio; Pissinatti, Lorenzo; Rodrigues, Renata Lopes; Rojas-Moscoso, Julio Alejandro; Cogo, José Carlos; Metze, Konradin; Antunes, Edson; Nahoum, César; Mónica, Fabíola Z.; De Nucci, Gilberto

    2013-01-01

    Most amniotes vertebrates have an intromittent organ to deliver semen. The reptile Sphenodon and most birds lost the ancestral penis and developed a cloaca-cloaca mating. Known as hemipenises, the copulatory organ of Squamata shows unique features between the amniotes intromittent organ. They are the only paired intromittent organs across amniotes and are fully inverted and encapsulated in the tail when not in use. The histology and ultrastructure of the hemipenes of Crotalus durissus rattlesnake is described as the evolutionary implications of the main features discussed. The organization of hemipenis of Crotalus durissus terrificus in two concentric corpora cavernosa is similar to other Squamata but differ markedly from the organization of the penis found in crocodilians, testudinata, birds and mammals. Based on the available data, the penis of the ancestral amniotes was made of connective tissue and the incorporation of smooth muscle in the framework of the sinusoids occurred independently in mammals and Crotalus durissus. The propulsor action of the muscle retractor penis basalis was confirmed and therefore the named should be changed to musculus hemipenis propulsor.The retractor penis magnus found in Squamata has no homology to the retractor penis of mammals, although both are responsible for the retraction of the copulatory organ. PMID:23840551

  10. Discovery of a Novel Accessory Structure of the Pitviper Infrared Receptor Organ (Serpentes: Viperidae)

    PubMed Central

    Bolívar-G, Wilmar; Antoniazzi, Marta M.; Grant, Taran; Jared, Carlos

    2014-01-01

    The facial pits of rattlesnakes, copperheads, lanceheads, bushmasters and other American and Asian pitvipers (Crotalinae) are highly innervated and densely vascularized infrared (IR) receptor organs. For over a century, studies have focused on a small sample of model species from North America and Asia. Based on an expanded survey of Central and South American crotalines, we report a conspicuous accessory structure composed of well-defined papillae that project from the anterior orbital adnexa. The papillae are continuous with the inner chamber of the IR receptor organ and our histological and ultrastructural data suggest that they possess a well-developed nervous network and extensive vascularization; however, they lack the characteristic IR-sensitive terminal nerve masses found in the IR-receptive pit membrane. The function of the IR receptor organ papillae is unknown. PMID:24595025

  11. Antitumor effect of Bothrops jararaca venom.

    PubMed Central

    da Silva, Reinaldo J; da Silva, Márcia G; Vilela, Lízia C; Fecchio, Denise

    2002-01-01

    Many experimental studies have been carried out using snake venoms for the treatment of animal tumors, with controversial results. While some authors have reported an antitumor effect of treatment with specific snake venom fractions, others have reported no effects after this treatment. The aim of this study was to evaluate the effect of Bothrops jararaca venom (BjV) on Ehrlich ascites tumor (EAT) cells in vivo and in vitro. In the in vivo study, Swiss mice were inoculated with EAT cells by the intraperitoneal (i.p.) route and treated with BjV venom (0.4 mg/kg, i.p.), on the 1st, 4th, 7th, 10th, and 13th days. Mice were evaluated for total and differential cells number on the 2nd, 5th, 8th, 11th and 14th days. The survival time was also evaluated after 60 days of tumor growth. In the in vitro study, EAT and normal peritoneal cells were cultivated in the presence of different BjV concentrations (2.5, 5.0, 10.0, 20.0, 40.0, and 80 microg) and viability was verified after 3, 6, 12 and 24 h of cultivation. Results were analyzed statistically by the Kruskal-Wallis and Tukey tests at the 5% level of significance. It was observed that in vivo treatment with BjV induced tumor growth inhibition, increased animal survival time, decreased mortality, increased the influx of polymorphonuclear leukocytes on the early stages of tumor growth, and did not affect the mononuclear cells number. In vitro treatment with BjV produced a dose-dependent toxic effect on EAT and peritoneal cells, with higher effects against peritoneal cells. Taken together, our results demonstrate that BjV has an important antitumor effect. This is the first report showing this in vivo effect for this venom. PMID:12061431

  12. New methodology for the obtainment of antibothropic factors from the South American opossum (Didelphis marsupialis) and jararaca snake (Bothrops jararaca).

    PubMed

    Neves-Ferreira, A G; Valente, R H; Sá, P G; Rocha, S L; Moussatché, H; Domont, G B; Perales, J

    1999-10-01

    The antibothropic factor (ABF) from D. marsupialis was collected from perforated hollow plastic golf balls which were surgically implanted subcutaneously in anesthetized opossums, a technique originally described for the production of polyclonal antibodies. Two months after the implantation of the balls, approximately 15 ml of seromatous fluid from D. marsupialis (SFDm-50 mg total protein/ml) could be recovered monthly. Opossum serum as well as SFDm showed similar SDS-PAGE profiles and antihemorrhagic potencies against Bothrops jararaca snake venom (Bjv). The presence of ABF in SFDm was confirmed by immunoblotting, using rabbit polyclonal antibodies raised against ABF isolated from opossum serum. ABF isolated from SFDm or from serum by ion-exchange chromatography showed identical chromatographic and electrophoretic profiles. ABF fromboth sources displayed very similar antihemorrhagic and anticaseinolytic activities against Bjv. In the case of B. jararaca, polyethylene perforated tubes were inserted in the abdominal cavity and two months after implantation, approximately 4 ml of seromatous fluid from B. jararaca (SFBj-23 mg total protein/ml) were recovered. B.jararaca serum and SFBj showed the same native and SDS-PAGE band pattern. Both serum and SFBj inhibited Bjv hemorrhagic activity. We conclude that this new methodology is very suitable for continuously obtaining opossum ABF and SFBj, in large scale and in an easier way, avoiding animal suffering and eventual sacrifice. PMID:10414866

  13. Agathos Daimon and the Asklepian serpent.

    PubMed

    Pearn, John

    2011-06-01

    Much conjecture abounds about the origin of the Asklepian serpent of healing, this latter the universal metonym for curative medicine. Iconographic evidence of Asklepios with his staff-entwined serpent exists from Hippocratic times. Many theories exist about the origin of this reptilian symbol of curative medicine. Speculation has ranged from the skin-shed serpent emergent in new and robust health to putative associations with earlier Egyptian and Babylonian anguine (snake) symbols of life-determining power. Other scholars have drawn attention to the Palaeolithic, Neolithic and later Bronze-Age associations with serpent veneration in the context of rain and fertility religious invocations in India; and in many other cultures. In the South Pacific, in Australia and in Central and South America, serpents were regarded as spirits of the earth, often chthonian spirits who possessed life-giving powers. In Chaldean and Arabic etymology, the words for "serpent" and "life" have a synergy. In Classical Greece, the Agathos Daimon was literally the "noble spirit", a personal companion spirit ensuing health and good fortune. The Agathos Daimon was portrayed in iconography as a serpent, or as a fit and comely youth. This paper conjectures that the serpentine Agathos Daimon was one origin of the Asklepian symbol of medicine, portrayed as the serpent associated of the Homeric Asklepios. In later Roman times, the Agathos Daimon was transliterated to the agathodaemon, a protective companion spirit both of individuals and of the homes in which they lived. This benign resident spirit featured prominently in Roman art and was a common feature as a protective household spirit in first century homes at both Pompeii and Herculaneum. The agathodaemon motif also featured on Roman coins, such as bronze diobols of Antoninus Plus (138 - 161 A.D.) from Alexandrian mints in Egypt. In the twenty-first century, the serpentine Agathos Daimon is honoured not only as the symbol of medicine; but is

  14. Interaction of Bothrops jararaca venom metalloproteinases with protein inhibitors.

    PubMed

    Asega, Amanda F; Oliveira, Ana K; Menezes, Milene C; Neves-Ferreira, Ana Gisele C; Serrano, Solange M T

    2014-03-01

    Snake venom metalloproteinases (SVMPs) play important roles in the local and systemic hemorrhage observed upon envenomation. In a previous study on the structural elements important for the activities of HF3 (highly hemorrhagic, P-III-SVMP), bothropasin (hemorrhagic, P-III-SVMP) and BJ-PI (non-hemorrhagic, P-I-SVMP), from Bothrops jararaca, it was demonstrated that they differ in their proteolysis profile of plasma and extracellular matrix proteins. In this study, we evaluated the ability of proteins DM43 and α2-macroglobulin to interfere with the proteolytic activity of these SVMPs on fibrinogen and collagen VI and with their ability to induce hemorrhage. DM43 inhibited the proteolytic activity of bothropasin and BJ-PI but not that of HF3, and was not cleaved the three proteinases. On the other hand, α2-macroglobulin did not inhibit any of the proteinases and was rather cleaved by them. In agreement with these findings, binding analysis showed interaction of bothropasin and BJ-PI but not HF3 to DM43 while none of the proteinases bound to α2-macroglobulin. Moreover, DM43 promoted partial inhibition of the hemorrhagic activity of bothropasin but not that of HF3. Our results demonstrate that metalloproteinases of B. jararaca venom showing different domain composition, glycosylation level and hemorrhagic potency show variable susceptibilities to protein inhibitors. PMID:24433992

  15. A Double Take at 'Serpent' Drift

    NASA Technical Reports Server (NTRS)

    2004-01-01

    NASA's Mars Exploration Rover Spirit took this microscopic imager picture of the drift dubbed 'Serpent' on Spirit's 73rd martian day on Mars after successfully digging into the side of the drift. The image is the first-ever microscopic look inside a drift. It captures only the scuffed interior of the Serpent drift and is dominated by larger pea-shaped particles. These grains are not natural to the inside of the drift, but are crust particles that have tumbled into the scuffed area as a result of the digging. These grains lost their dust cover in the process of falling into the scuff, giving scientists clues about the strength -- or lack of strength -- of the bond between the dust and sand particles.

    Most interesting to scientists are the fine grains making up the interior of Serpent drift. The grains of sand found within drifts or dunes on Earth are usually about 200 micrometers (.008 inches) in diameter -- much like sand on a beach. On Earth, dunes are formed when sand particles of this size are bounced across a surface by wind and collect together as drifts. Smaller particles, like the ones making up Serpent drift, would not necessarily collect into a dune on Earth, but would more likely be distributed across the surface like dust. The fine grains making up the interior of Serpent drift are no larger than 50 or 60 micrometers (.002 inches) and can be compared to silt on Earth.

    How did this very fine material manage to accumulate into a drift? Earth-based tests that simulate the wind speed and atmospheric density of Mars have found it difficult to reproduce dunes with grain particles as small as those found in the Serpent drift. However, Earth-based tests cannot duplicate the gravity of Mars, which is one-third that of the gravity on Earth. This environmental factor is a likely contributor to the diminutive material making up Serpent drift.

  16. A Double Take at 'Serpent' Drift

    NASA Technical Reports Server (NTRS)

    2004-01-01

    NASA's Mars Exploration Rover Spirit took this microscopic imager picture of the drift dubbed 'Serpent' on Spirit's 73rd martian day on Mars after successfully digging into the side of the drift. The image, which has a black box at the top caused by missing data, captures a transition part of the drift where lighter, undisturbed material meets disturbed, darker material. The microscopic view of the undisturbed material reveals sphere-like grains with diameters between one and two millimeters (.04 and .08 inches), which are similar to the grains Spirit observed in other drift areas near Spirit's landing site, Gusev Crater. These larger grains form a single layer or crust on the surface of the drift and are covered in a fine layer of martian dust.

    Most interesting to scientists are the fine grains making up the interior of Serpent drift. The grains of sand found within drifts or dunes on Earth are usually about 200 micrometers (.008 inches) in diameter--much like sand on a beach. On Earth, dunes are formed when sand particles of this size are bounced across a surface by wind and collect together as drifts. Smaller particles, like the ones making up Serpent drift, would not necessarily collect into a dune on Earth, but would more likely be distributed across the surface like dust. The fine grains making up the interior of Serpent drift are no larger than 50 or 60 micrometers (.002 inches) and can be compared to silt on Earth.

    How did this very fine material managed to accumulate into a drift? Earth-based tests that simulate the wind speed and atmospheric density of Mars have found it difficult to reproduce dunes with grain particles as small as those found in the Serpent drift. However, Earth-based tests cannot duplicate the gravity of Mars, which is one-third that of the gravity on Earth. This environmental factor is a likely contributor to the diminutive material making up Serpent drift.

  17. Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925) (Reptilia: Serpentes: Viperidae).

    PubMed

    Guo, Peng; Liu, Qin; Zhu, Fei; Zhong, Guang H; Chen, Xin; Myers, Edward A; Che, Jing; Zhang, Liang; Ziegler, Thomas; Nguyen, Truong Q; Burbrink, Frank T

    2016-06-01

    Viridovipera stejnegeri is one of the most common pit vipers in Asia, with a wide distribution in southern China and Vietnam. We investigated historical demography and explored how the environment and climatic factors have shaped genetic diversity and the evolutionary history of this venomous snake. A total of 171 samples from 47 localities were sequenced and analysed for two mitochondrial gene fragments and three nuclear genes. Gene trees reveal the existence of two well-supported clades (Southwest China and Southeast China) with seven distinct and strongly supported, geographically structured subclades within V. stejnegeri. Estimation of divergence time and ancestral area suggests that V. stejnegeri originated at ~6.0 Ma in the late Miocene on the Yunnan-Guizhou Plateau. The estimated date of origin and divergence of the island populations of Taiwan and Hainan closely matches the geological origin of the both islands. The mtDNA gene tree reveals the presence of west-east diversification in V. stejnegeri populations. Complex orogenesis and heterogeneous habitats, as well as climate-mediated habitat differentiation including glacial cycles, all have influenced population structure and the distribution of this taxon. The validity of V. stejnegeri chenbihuii is questionable, and this subspecies most probably represents an invalid taxon. PMID:27094901

  18. Phenotypic differences in a cryptic predator: factors influencing morphological variation in the terciopelo Bothrops asper (Garman, 1884; Serpentes: Viperidae).

    PubMed

    Saldarriaga-Córdoba, Mónica María; Sasa, Mahmood; Pardo, Rodrigo; Méndez, Marco Antonio

    2009-12-01

    The terciopelo Bothrops asper, is a cryptic lancehead pitviper widely distributed in humid environments of Middle America and the north-western portion of South America. Throughout its extensive distribution range, the terciopelo exhibits great morphological variation in external characters, a situation that has complicated its proper separation from other related species. In this paper, we analyzed the phenotypic variation of B. asper based in a sample of 514 specimens from nine distinct physiographic regions. Univariate and multivariate analyses demonstrated great phenotypic differentiation among most pre-established groups, and the pattern is fairly congruent between sexes. However, no correspondence was observed between morphological variation and molecular divergence, inferred from mDNA sequences, between individuals representing the physiographical regions under study. Geographic variation in the number of interrictals, ventral scales, subcaudal scales and dorsal blotches was positively correlated with latitude and number of dry months, but inversely related with precipitation. However, other variables do not exhibit such an effect. The observed relationships between scale counts and environmental variables are explained in terms of selective pressures to improve water balance along the distributional range of the species. PMID:19505490

  19. Description of Serpentirhabdias atroxi n. sp. (Nematoda: Rhabdiasidae), a parasite of Bothrops atrox (Linnaeus) (Reptilia: Serpentes: Viperidae) in Brazilian Amazonia.

    PubMed

    Kuzmin, Yuriy; Giese, Elane Guerreiro; Melo, Francisco Tiago de Vasconcelos; da Costa, Paulo André Ferreira Borges; Maschio, Gleomar Fabiano; dos Santos, Jeannie Nascimento

    2016-01-01

    A new lung-dwelling nematode species is described from the common lancehead Bothrops atrox (Linnaeus) in the Brazilian Amazon Region. The species is assigned to the genus Serpentirhabdias Tkach, Kuzmin & Snyder, 2014 based on the presence of six lips arranged in two lateral groups, the absence of prominent cuticular inflations, and lung parasitism in snakes. Serpentirhabdias atroxi n. sp. differs from other species of the genus mainly by details of the morphology of the anterior end: cuticularised ring surrounding the anterior part of the buccal cavity and six minute onchia present in the oesophastome. Serpentirhabdias atroxi n. sp. is the seventh species of the genus known from the Neotropical Realm and the second species described from viperid snakes. PMID:26739285

  20. Appraisal of antiophidic potential of marine sponges against Bothrops jararaca and Lachesis muta venom.

    PubMed

    Faioli, Camila Nunes; Domingos, Thaisa Francielle Souza; de Oliveira, Eduardo Coriolano; Sanchez, Eládio Flores; Ribeiro, Suzi; Muricy, Guilherme; Fuly, Andre Lopes

    2013-10-01

    Snakebites are a health problem in many countries due to the high incidence of such accidents. Antivenom treatment has regularly been used for more than a century, however, this does not neutralize tissue damage and may even increase the severity and morbidity of accidents. Thus, it has been relevant to search for new strategies to improve antiserum therapy, and a variety of molecules from natural sources with antiophidian properties have been reported. In this paper, we analyzed the ability of ten extracts from marine sponges (Amphimedon viridis, Aplysina fulva, Chondrosia collectrix, Desmapsamma anchorata, Dysidea etheria, Hymeniacidon heliophila, Mycale angulosa, Petromica citrina, Polymastia janeirensis, and Tedania ignis) to inhibit the effects caused by Bothrops jararaca and Lachesis muta venom. All sponge extracts inhibited proteolysis and hemolysis induced by both snake venoms, except H. heliophila, which failed to inhibit any biological activity. P. citrina inhibited lethality, hemorrhage, plasma clotting, and hemolysis induced by B. jararaca or L. muta. Moreover, other sponges inhibited hemorrhage induced only by B. jararaca. We conclude that Brazilian sponges may be a useful aid in the treatment of snakebites caused by L. muta and B. jararaca and therefore have potential for the discovery of molecules with antiophidian properties. PMID:24141284

  1. Burnup calculation methodology in the serpent 2 Monte Carlo code

    SciTech Connect

    Leppaenen, J.; Isotalo, A.

    2012-07-01

    This paper presents two topics related to the burnup calculation capabilities in the Serpent 2 Monte Carlo code: advanced time-integration methods and improved memory management, accomplished by the use of different optimization modes. The development of the introduced methods is an important part of re-writing the Serpent source code, carried out for the purpose of extending the burnup calculation capabilities from 2D assembly-level calculations to large 3D reactor-scale problems. The progress is demonstrated by repeating a PWR test case, originally carried out in 2009 for the validation of the newly-implemented burnup calculation routines in Serpent 1. (authors)

  2. Richard Owen and the sea-serpent.

    PubMed

    Regal, Brian

    2012-06-01

    The well known naturalist, Richard Owen, had a career long engagement with monstrous creatures. In the 1830s he famously christened large fossil reptiles, Dinosauria. He investigated fossil marine reptiles as well as the giant moa. He also looked into the sea-serpents and sea monsters then drawing wide public attention. He actively collected letters and analyzed correspondence on the topic, consulted with the admiralty on reports of Royal Navy encounters and sightings, and commented in the public press. He concluded that such reports were based upon misidentifications of whales and other large marine mammals, and not run-ins with mythological creatures. His work on the sea-serpent shows that rather than discount the idea out of hand, a number of high profile naturalists were intrigued by monsters and attempted to understand what they were. His work is key to understanding the skepticism over monsters held by modern mainstream science. This skepticism opened the field to later amateur investigators. PMID:22305471

  3. Proteomic Analysis of the Ontogenetic Variability in Plasma Composition of Juvenile and Adult Bothrops jararaca Snakes

    PubMed Central

    de Morais-Zani, Karen; Grego, Kathleen Fernandes; Tanaka, Aparecida Sadae; Tanaka-Azevedo, Anita Mitico

    2013-01-01

    The ontogenetic variability in venom composition of some snake genera, including Bothrops, as well as the biological implications of such variability and the search of new molecules that can neutralize the toxic components of these venoms have been the subject of many studies. Thus, considering the resistance of Bothrops jararaca to the toxic action of its own venom and the ontogenetic variability in venom composition described in this species, a comparative study of the plasma composition of juvenile and adult B. jararaca snakes was performed through a proteomic approach based on 2D electrophoresis and mass spectrometry, which allowed the identification of proteins that might be present at different levels during ontogenetic development. Among the proteins identified by mass spectrometry, antihemorrhagic factor Bj46a was found only in adult plasma. Moreover, two spots identified as phospholipase A2 inhibitors were significantly increased in juvenile plasma, which can be related to the higher catalytic PLA2 activity shown by juvenile venom in comparison to that of adult snakes. This work shows the ontogenetic variability of B. jararaca plasma, and that these changes can be related to the ontogenetic variability described in its venom. PMID:24062950

  4. Cystyl aminopeptidase activity in the plasma, viscera and brain of the snake Bothrops jararaca.

    PubMed

    Alponti, Rafaela Fadoni; Zambotti-Villela, Leonardo; Murena-Nunes, Cristiane; Marinho, Camila Eduardo; do Amaral Olivo, Renata; Silveira, Paulo Flavio

    2005-07-01

    The relationship between plasma osmolality and cystyl aminopeptidase was characterized in the snake Bothrops jararaca and comparisons were made with the emerging picture of this relationship in rats. The profile of cystyl aminopeptidase activity under basal conditions was determined in the soluble and membrane-bound forms in visceral organs and in the central nervous system in comparison with that of alanyl aminopeptidase. The regional localization of cystyl and alanyl aminopeptidase activities was studied in the central nervous system. The basal level of plasma cystyl aminopeptidase, four- to six-fold higher than in rats, suggests its importance to help regulate circulating levels of neurohypophysial peptides in B. jararaca snake. The osmotic sensitivity of this plasma enzyme, undetectable in male, but about three-fold higher in female snakes than in rats, reveals a sexual dimorphism. In marked contrast to those observed in rats, low levels of soluble and particulate forms in the kidney indicate that cystyl aminopeptidase plays a minor metabolizing role at this anatomical location in B. jararaca. Despite of the regional-specific divergence between the levels of rat and snake enzymes, the bilaterally symmetric pattern of the diencephalic distribution of alanyl aminopeptidase reflects functional homologies between these two distantly related species. PMID:16006161

  5. Intraspecific variation of biological activities in venoms from wild and captive Bothrops jararaca.

    PubMed

    Saad, Eduardo; Curtolo Barros, Luciana; Biscola, Natalia; Pimenta, Daniel C; Barraviera, Silvia R C S; Barraviera, Benedito; Seabra Ferreira, Rui

    2012-01-01

    The venom of Bothrops jararaca is composed of complex mixture of molecules, mainly lectins, metalloproteinases, serinoproteinases, desintegrins, phospholipases, and peptides. This composition may vary according to the snake's age, gender, and region of origin. The aim of the was to determine individual variation in Bothrops jararaca venom in the Botucatu region, Sao Paulo State, Brazil, by means of enzymatic, biochemical, and pharmacological characterization, utilizing in vitro tests and biological assays. The activities were compared with those of Brazilian Reference Venom (BRV). Protein concentration varied between adult and juvenile groups. The electrophoretic profiles were similar, with molecular masses ranging between 25 and 50 kD, but with intraspecific variations. Reverse-phase high-performance liquid chromatography (RP-HPLC) revealed protein concentration differences. Coagulant activity did not differ significantly among adult groups, but there was a large variation between juvenile venom and BRV, which coagulated more extensively. Venoms from adults displayed greater hemorrhagic activity, especially in males recently obtained from the wild. In contrast, juveniles kept in captivity and adult males showed higher values. Edematogenic activity displayed an increase in edema in all groups. At the mean lethal dose (LD₅₀), toxicity varied significantly between groups, with venom from captive females being threefold more toxic than juvenile venom. Data illustrate the intra- and interspecific complexity that occurs in snake venoms, which may be attributed to ontogenetic, sexual, and environmental factors that affect variability in Bothrops jararaca venom. Further, it is proposed that Brazilian public health authorities document the constitution of pooled venom employed in the immunization of serum-producing animals due to this variability in venom properties. Given the large Brazilian territory, this variability requires regional monitoring and evaluation of

  6. Antivenom Effects of 1,2,3-Triazoles against Bothrops jararaca and Lachesis muta Snakes

    PubMed Central

    Domingos, Thaisa F. S.; Moura, Laura de A.; Carvalho, Carla; Campos, Vinícius R.; Jordão, Alessandro K.; Cunha, Anna C.; Ferreira, Vitor F.; de Souza, Maria Cecília B. V.; Sanchez, Eladio F.; Fuly, André L.

    2013-01-01

    Snake venoms are complex mixtures of proteins of both enzymes and nonenzymes, which are responsible for producing several biological effects. Human envenomation by snake bites particularly those of the viperid family induces a complex pathophysiological picture characterized by spectacular changes in hemostasis and frequently hemorrhage is also seen. The present work reports the ability of six of a series of 1,2,3-triazole derivatives to inhibit some pharmacological effects caused by the venoms of Bothrops jararaca and Lachesis muta. In vitro assays showed that these compounds were impaired in a concentration-dependent manner, the fibrinogen or plasma clotting, hemolysis, and proteolysis produced by both venoms. Moreover, these compounds inhibited biological effects in vivo as well. Mice treated with these compounds were fully protected from hemorrhagic lesions caused by such venoms. But, only the B. jararaca edema-inducing activity was neutralized by the triazoles. So the inhibitory effect of triazoles derivatives against some in vitro and in vivo biological assays of snake venoms points to promising aspects that may indicate them as molecular models to improve the production of effective antivenom or to complement antivenom neutralization, especially the local pathological effects, which are partially neutralized by antivenoms. PMID:23710441

  7. Absence of oxytocin in the central nervous system of the snake Bothrops jararaca.

    PubMed

    Lazari, Maria Fatima Magalhaes; Alponti, Rafaela Fadoni; Freitas, Thalma Ariani; Breno, Maria Cristina; da Conceicao, Isaltino Marcelo; Silveira, Paulo Flavio

    2006-11-01

    We used four complementary techniques to investigate the presence of oxytocin peptide in the hypophysis and brain of the snake Bothrops jararaca. A high-pressure liquid chromatographic analysis failed to show oxytocin in extracts of hypophysial and brain tissues but provided estimative values of the amounts of vasotocin (12 ng/mg hypophysis and 0.5 ng/mg brain) and mesotocin (500 pg/mg hypophysis and 8 pg/mg brain). Western blots with a polyclonal anti-oxytocin antibody failed to detect oxytocin in both tissues but detected compounds with higher molecular weight than oxytocin, as well as a relatively weak cross-reactivity with mesotocin. The reverse transcription-polymerase chain reaction analysis failed to detect the expression of oxytocin gene transcript, but detected a transcript related to the mesotocin-neurophysin precursor in both tissues. Immunohistochemistry with the same anti-oxytocin antibody detected strong staining in the neurohypophysis and in few fibers in the inner zone of the median eminence, which was not abolished by pre-adsorption of this antibody with oxytocin, vasopressin, vasotocin or mesotocin and might not be attributed to oxytocin. In conclusion, our data demonstrate the absence of oxytocin in the central nervous system of the snake B. jararaca and underline the pitfalls that can result from the use of a single technique to investigate the presence of peptides in tissues. PMID:16838134

  8. Antigenic, microbicidal and antiparasitic properties of an l-amino acid oxidase isolated from Bothrops jararaca snake venom.

    PubMed

    Ciscotto, P; Machado de Avila, R A; Coelho, E A F; Oliveira, J; Diniz, C G; Farías, L M; de Carvalho, M A R; Maria, W S; Sanchez, E F; Borges, A; Chávez-Olórtegui, C

    2009-03-01

    Venoms from the bee Apis mellifera, the caterpillar Lonomia achelous, the spiders Lycosa sp. and Phoneutria nigriventer, the scorpions Tityus bahiensis and Tityus serrulatus, and the snakes Bothrops alternatus, Bothrops jararaca, Bothrops jararacussu, Bothrops moojeni, Bothrops neuwiedi, Crotalus durissus terrificus, and Lachesis muta were assayed (800mug/mL) for activity against Staphylococcus aureus. Venoms from B. jararaca and B. jararacussu showed the highest S. aureus growth inhibition and also against other Gram-positive and Gram-negative bacteria. To characterize the microbicidal component(s) produced by B. jararaca, venom was fractionated through gel exclusion chromatography. The high molecular weight, anti-S. aureus P1 fraction was further resolved by anion exchange chromatography through Mono Q columns using a 0-0.5M NaCl gradient. Bactericidal Mono Q fractions P5 and P6 showed significant LAAO activity using l-leucine as substrate. These fractions were pooled and subjected to Heparin affinity chromatography, which rendered a single LAAO activity peak. The anti-S. aureus activity was abolished by catalase, suggesting that the effect is dependent on H(2)O(2) production. SDS-PAGE of isolated LAAO indicated the presence of three isoforms since deglycosylation with a recombinant N-glycanase rendered a single 38.2 kDa component. B. jararaca LAAO specific activity was 142.7 U/mg, based on the oxidation of l-leucine. The correlation between in vivo neutralization of lethal toxicity (ED(50)) and levels of horse therapeutic antibodies anti-LAAO measured by ELISA was investigated to predict the potency of Brazilian antibothropic antivenoms. Six horses were hyperimmunized with Bothrops venoms (50% from B. jararaca and 12.5% each from B. alternatus, B. jararacussu, B. neuwiedii and B. moojeni). To set up an indirect ELISA, B. jararaca LAAO and crude venom were used as antigens. Correlation coefficients (r) between ED(50) and ELISA antibody titers against B. jararaca

  9. Generation of SFR few-group constants using the Monte Carlo code Serpent

    SciTech Connect

    Fridman, E.; Rachamin, R.; Shwageraus, E.

    2013-07-01

    In this study, the Serpent Monte Carlo code was used as a tool for preparation of homogenized few-group cross sections for the nodal diffusion analysis of Sodium cooled Fast Reactor (SFR) cores. Few-group constants for two reference SFR cores were generated by Serpent and then employed by nodal diffusion code DYN3D in 2D full core calculations. The DYN3D results were verified against the references full core Serpent Monte Carlo solutions. A good agreement between the reference Monte Carlo and nodal diffusion results was observed demonstrating the feasibility of using Serpent for generation of few-group constants for the deterministic SFR analysis. (authors)

  10. Detection of an antibothropic fraction in opossum (Didelphis marsupialis) milk that neutralizes Bothrops jararaca venom.

    PubMed

    Jurgilas, P B; Neves-Ferreira, A G; Domont, G B; Moussatché, H; Perales, J

    1999-01-01

    An antibothropic fraction (ABF) from Didelphis marsupialis (opossum) serum, which is responsible for the neutralization of Bothrops jararaca venom was isolated by Perales et al. [Perales, J., Moussatché, H., Marangoni, S., Oliveira, B. and Domont, G. B. (1994). Isolation and partial characterization of an antibothropic complex from the serum of South American Didelphidae. Toxicon 32, 1237-1249]. The aim of this work was to verify the presence of this factor in opossum's milk, which could represent an additional protection for the neonatal opossum against bothropic venoms. An active milk fraction was isolated and showed similar physicochemical, structural, antigenic and biological properties when compared to ABF, indicating that they are probably the same protein. PMID:9920488

  11. Ancient scientific basis of the "great serpent" from historical evidence

    NASA Technical Reports Server (NTRS)

    Stothers, Richard B.

    2004-01-01

    Zoological data and a growing mythology contributed to ancient Western knowledge about large serpents. Yet little modern attention has been paid to the sources, transmission, and receipt in the early Middle Ages of the ancients' information concerning "dragons" and "sea serpents." Real animals--primarily pythons and whales--lie behind the ancient stories. Other animals, conflations of different animals, simple misunderstandings, and willful exaggerations are found to account for the fanciful embellishments, but primitive myths played no significant role in this process during classical times. The expedition of Alexander the Great into India (327-325 B.C.) and the Bagradas River incident in North Africa (256 B.C.) had enormous repercussions on the development of serpent lore. Credible evidence is found for the presence of ancient populations of pythons living along the North African coast west of Egypt and along the coast of the Arabian Sea between the Indus River and the Strait of Hormuz--places where they no longer exist today. The maximum sizes of ancient pythons may have been greater than those of today's specimens.

  12. Ancient scientific basis of the "great serpent" from historical evidence.

    PubMed

    Stothers, Richard B

    2004-06-01

    Zoological data and a growing mythology contributed to ancient Western knowledge about large serpents. Yet little modern attention has been paid to the sources, transmission, and receipt in the early Middle Ages of the ancients' information concerning "dragons" and "sea serpents." Real animals--primarily pythons and whales--lie behind the ancient stories. Other animals, conflations of different animals, simple misunderstandings, and willful exaggerations are found to account for the fanciful embellishments, but primitive myths played no significant role in this process during classical times. The expedition of Alexander the Great into India (327-325 B.C.) and the Bagradas River incident in North Africa (256 B.C.) had enormous repercussions on the development of serpent lore. Credible evidence is found for the presence of ancient populations of pythons living along the North African coast west of Egypt and along the coast of the Arabian Sea between the Indus River and the Strait of Hormuz--places where they no longer exist today. The maximum sizes of ancient pythons may have been greater than those of today's specimens. PMID:15490966

  13. Combined venomics, venom gland transcriptomics, bioactivities, and antivenomics of two Bothrops jararaca populations from geographic isolated regions within the Brazilian Atlantic rainforest.

    PubMed

    Gonçalves-Machado, Larissa; Pla, Davinia; Sanz, Libia; Jorge, Roberta Jeane B; Leitão-De-Araújo, Moema; Alves, Maria Lúcia M; Alvares, Diego Janisch; De Miranda, Joari; Nowatzki, Jenifer; de Morais-Zani, Karen; Fernandes, Wilson; Tanaka-Azevedo, Anita Mitico; Fernández, Julián; Zingali, Russolina B; Gutiérrez, José María; Corrêa-Netto, Carlos; Calvete, Juan J

    2016-03-01

    Bothrops jararaca is a slender and semi-arboreal medically relevant pit viper species endemic to tropical and subtropical forests in southern Brazil, Paraguay, and northern Argentina (Misiones). Within its geographic range, it is often abundant and is an important cause of snakebite. Although no subspecies are currently recognized, geographic analyses have revealed the existence of two well-supported B. jararaca clades that diverged during the Pliocene ~3.8Mya and currently display a southeastern (SE) and a southern (S) Atlantic rainforest (Mata Atlântica) distribution. The spectrum, geographic variability, and ontogenetic changes of the venom proteomes of snakes from these two B. jararaca phylogroups were investigated applying a combined venom gland transcriptomic and venomic analysis. Comparisons of the venom proteomes and transcriptomes of B. jararaca from the SE and S geographic regions revealed notable interpopulational variability that may be due to the different levels of population-specific transcriptional regulation, including, in the case of the southern population, a marked ontogenetic venom compositional change involving the upregulation of the myotoxic PLA2 homolog, bothropstoxin-I. This population-specific marker can be used to estimate the proportion of venom from the southern population present in the B. jararaca venom pool used for the Brazilian soro antibotrópico (SAB) antivenom production. On the other hand, the southeastern population-specific D49-PLA2 molecules, BinTX-I and BinTX-II, lend support to the notion that the mainland ancestor of Bothrops insularis was originated within the same population that gave rise to the current SE B. jararaca phylogroup, and that this insular species endemic to Queimada Grande Island (Brazil) expresses a pedomorphic venom phenotype. Mirroring their compositional divergence, the two geographic B. jararaca venom pools showed distinct bioactivity profiles. However, the SAB antivenom manufactured in Vital Brazil

  14. Effect of diterpenes isolated of the marine alga Canistrocarpus cervicornis against some toxic effects of the venom of the bothrops jararaca snake.

    PubMed

    Domingos, Thaisa Francielle Souza; Vallim, Magui Aparecida; Cavalcanti, Diana Negrão; Sanchez, Eládio Flores; Teixeira, Valéria Laneuville; Fuly, André Lopes

    2015-01-01

    Snake venoms are composed of a complex mixture of active proteins and peptides which induce a wide range of toxic effects. Envenomation by Bothrops jararaca venom results in hemorrhage, edema, pain, tissue necrosis and hemolysis. In this work, the effect of a mixture of two secodolastane diterpenes (linearol/isolinearol), previously isolated from the Brazilian marine brown alga, Canistrocarpus cervicornis, was evaluated against some of the toxic effects induced by B. jararaca venom. The mixture of diterpenes was dissolved in dimethylsulfoxide and incubated with venom for 30 min at room temperature, and then several in vivo (hemorrhage, edema and lethality) and in vitro (hemolysis, plasma clotting and proteolysis) assays were performed. The diterpenes inhibited hemolysis, proteolysis and hemorrhage, but failed to inhibit clotting and edema induced by B. jararaca venom. Moreover, diterpenes partially protected mice from lethality caused by B. jararaca venom. The search for natural inhibitors of B. jararaca venom in C. cervicornis algae is a relevant subject, since seaweeds are a rich and powerful source of active molecules which are as yet but poorly explored. Our results suggest that these diterpenes have the potential to be used against Bothropic envenomation accidents or to improve traditional treatments for snake bites. PMID:25699595

  15. Effect of photobiomodulation on endothelial cell exposed to Bothrops jararaca venom.

    PubMed

    Franco, Ana Tereza Barufi; Silva, Luciana Miato Gonçalves; Costa, Marcília Silva; Zamuner, Silvia Fernanda; Vieira, Rodolfo Paula; de Fatima Pereira Teixeira, Catarina; Zamuner, Stella Regina

    2016-07-01

    Bleeding is a common feature in envenoming caused by Bothrops snake venom due to extensive damage to capillaries and venules, producing alterations in capillary endothelial cell morphology. It has been demonstrated, in vivo, that photobiomodulation (PBM) decreases hemorrhage after venom inoculation; however, the mechanism is unknown. Thus, the objective was to investigate the effects of PBM on a murine endothelial cell line (tEnd) exposed to Bothrops jararaca venom (BjV). Cells were exposed to BjV and irradiated once with either 660- or 780-nm wavelength laser light at energy densities of 4 and 5 J/cm(2), respectively, and irradiation time of 10 s. Cell integrity was analyzed by crystal violet and cell viability/mitochondrial metabolism by MTT assay. The release of lactic dehydrogenase (LDH) was quantified as a measure of cell damage. In addition, cytokine IL1-β levels were measured in the supernatant. PBM at 660 and 780 nm wavelength was able to increase cellular viability and decrease the release of LDH and the loss of cellular integrity. In addition, the concentration of pro-inflammatory cytokine IL1-β was reduced after PBM by both wavelengths. The data reported herein indicates that irradiation with red or near-infrared laser resulted in protection on endothelial cells after exposure to Bothrops venom and could be, at least in part, a reasonable explanation by the beneficial effects of PBM inhibiting the local effects induced by Bothrops venoms, in vivo. PMID:27147074

  16. Inhibition of the hyperalgesic activity of Bothrops jararaca venom by an antibothropic fraction isolated from opossum (Didelphis marsupialis) serum.

    PubMed

    Rocha, S L; Frutuoso, V S; Domont, G B; Martins, M A; Moussatché, H; Perales, J

    2000-06-01

    The antibothropic fraction (ABF) already isolated from Didelphis marsupialis serum, inhibits the haemorrhagic, oedematogenic, myonecrotic and lethal activities of Bothrops jararaca venom (Bjv). The aim of this work was to verify the capability of ABF to inhibit the hyperalgesic activity of Bjv. Intraplantar injection of Bjv induced hyperalgesia in a time- and dose-dependent manner and ABF administered in situ concomitantly with Bjv or i.v. 30 min before venom injection reduced the induced hyperalgesia. This same effect was observed when ABF was intravenously injected at 5 and 15 min after Bjv. Our results show that ABF inhibits also the hyperalgesia induced by Bjv. PMID:10695972

  17. Interpolations of nuclide-specific scattering kernels generated with Serpent

    SciTech Connect

    Scopatz, A.; Schneider, E.

    2012-07-01

    The neutron group-to-group scattering cross section is an essential input parameter for any multi-energy group physics model. However, if the analyst prefers to use Monte Carlo transport to generate group constants this data is difficult to obtain for a single species of a material. Here, the Monte Carlo code Serpent was modified to return the group transfer probabilities on a per-nuclide basis. This ability is demonstrated in conjunction with an essential physics reactor model where cross section perturbations are used to dynamically generate reactor state dependent group constants via interpolation from pre-computed libraries. The modified version of Serpent was therefore verified with three interpolation cases designed to test the resilience of the interpolation scheme to changes in intra-group fluxes. For most species, interpolation resulted in errors of less than 5% of transport-computed values. For important scatterers, such as {sup 1}H, errors less than 2% were observed. For nuclides with high errors ( > 10%), the scattering channel typically only had a small probability of occurring. (authors)

  18. Bothrops jararaca Venom Metalloproteinases Are Essential for Coagulopathy and Increase Plasma Tissue Factor Levels during Envenomation

    PubMed Central

    Yamashita, Karine M.; Alves, André F.; Barbaro, Katia C.; Santoro, Marcelo L.

    2014-01-01

    Background/Aims Bleeding tendency, coagulopathy and platelet disorders are recurrent manifestations in snakebites occurring worldwide. We reasoned that by damaging tissues and/or activating cells at the site of the bite and systemically, snake venom toxins might release or decrypt tissue factor (TF), resulting in activation of blood coagulation and aggravation of the bleeding tendency. Thus, we addressed (a) whether TF and protein disulfide isomerase (PDI), an oxireductase involved in TF encryption/decryption, were altered in experimental snake envenomation; (b) the involvement and significance of snake venom metalloproteinases (SVMP) and serine proteinases (SVSP) to hemostatic disturbances. Methods/Principal Findings Crude Bothrops jararaca venom (BjV) was preincubated with Na2-EDTA or AEBSF, which are inhibitors of SVMP and SVSP, respectively, and injected subcutaneously or intravenously into rats to analyze the contribution of local lesion to the development of hemostatic disturbances. Samples of blood, lung and skin were collected and analyzed at 3 and 6 h. Platelet counts were markedly diminished in rats, and neither Na2-EDTA nor AEBSF could effectively abrogate this fall. However, Na2-EDTA markedly reduced plasma fibrinogen consumption and hemorrhage at the site of BjV inoculation. Na2-EDTA also abolished the marked elevation in TF levels in plasma at 3 and 6 h, by both administration routes. Moreover, increased TF activity was also noticed in lung and skin tissue samples at 6 h. However, factor VII levels did not decrease over time. PDI expression in skin was normal at 3 h, and downregulated at 6 h in all groups treated with BjV. Conclusions SVMP induce coagulopathy, hemorrhage and increased TF levels in plasma, but neither SVMP nor SVSP are directly involved in thrombocytopenia. High levels of TF in plasma and TF decryption occur during snake envenomation, like true disseminated intravascular coagulation syndrome, and might be implicated in engendering

  19. The Serpent Monte Carlo Code: Status, Development and Applications in 2013

    NASA Astrophysics Data System (ADS)

    Leppänen, Jaakko; Pusa, Maria; Viitanen, Tuomas; Valtavirta, Ville; Kaltiaisenaho, Toni

    2014-06-01

    The Serpent Monte Carlo reactor physics burnup calculation code has been developed at VTT Technical Research Centre of Finland since 2004, and is currently used in 100 universities and research organizations around the world. This paper presents the brief history of the project, together with the currently available methods and capabilities and plans for future work. Typical user applications are introduced in the form of a summary review on Serpent-related publications over the past few years.

  20. Comparison of Serpent and HELIOS-2 as applied for the PWR few-group cross section generation

    SciTech Connect

    Fridman, E.; Leppaenen, J.; Wemple, C.

    2013-07-01

    This paper discusses recent modifications to the Serpent Monte Carlo code methodology and related to the calculation of few-group diffusion coefficients and reflector discontinuity factors The new methods were assessed in the following manner. First, few-group homogenized cross sections calculated by Serpent for a reference PWR core were compared with those generated 1 commercial deterministic lattice transport code HELIOS-2. Second, Serpent and HELIOS-2 fe group cross section sets were later employed by nodal diffusion code DYN3D for the modeling the reference PWR core. Finally, the nodal diffusion results obtained using the both cross section sets were compared with the full core Serpent Monte Carlo solution. The test calculations show that Serpent can calculate the parameters required for nodal analyses similar to conventional deterministic lattice codes. (authors)

  1. Aqueous Leaf Extract of Jatropha gossypiifolia L. (Euphorbiaceae) Inhibits Enzymatic and Biological Actions of Bothrops jararaca Snake Venom

    PubMed Central

    Félix-Silva, Juliana; Souza, Thiago; Menezes, Yamara A. S.; Cabral, Bárbara; Câmara, Rafael B. G.; Silva-Junior, Arnóbio A.; Rocha, Hugo A. O.; Rebecchi, Ivanise M. M.; Zucolotto, Silvana M.; Fernandes-Pedrosa, Matheus F.

    2014-01-01

    Snakebites are a serious public health problem due their high morbi-mortality. The main available specific treatment is the antivenom serum therapy, which has some disadvantages, such as poor neutralization of local effects, risk of immunological reactions, high cost and difficult access in some regions. In this context, the search for alternative therapies is relevant. Therefore, the aim of this study was to evaluate the antiophidic properties of Jatropha gossypiifolia, a medicinal plant used in folk medicine to treat snakebites. The aqueous leaf extract of the plant was prepared by decoction and phytochemical analysis revealed the presence of sugars, alkaloids, flavonoids, tannins, terpenes and/or steroids and proteins. The extract was able to inhibit enzymatic and biologic activities induced by Bothrops jararaca snake venom in vitro and in vivo. The blood incoagulability was efficiently inhibited by the extract by oral route. The hemorrhagic and edematogenic local effects were also inhibited, the former by up to 56% and the latter by 100%, in animals treated with extract by oral and intraperitoneal routes, respectively. The inhibition of myotoxic action of B. jararaca reached almost 100%. According to enzymatic tests performed, it is possible to suggest that the antiophidic activity may be due an inhibitory action upon snake venom metalloproteinases (SVMPs) and/or serine proteinases (SVSPs), including fibrinogenolytic enzymes, clotting factors activators and thrombin like enzymes (SVTLEs), as well upon catalytically inactive phospholipases A2 (Lys49 PLA2). Anti-inflammatory activity, at least partially, could also be related to the inhibition of local effects. Additionally, protein precipitating and antioxidant activities may also be important features contributing to the activity presented. In conclusion, the results demonstrate the potential antiophidic activity of J. gossypiifolia extract, including its significant action upon local effects, suggesting that

  2. Development of a dynamic simulation mode in Serpent 2 Monte Carlo code

    SciTech Connect

    Leppaenen, J.

    2013-07-01

    This paper presents a dynamic neutron transport mode, currently being implemented in the Serpent 2 Monte Carlo code for the purpose of simulating short reactivity transients with temperature feedback. The transport routine is introduced and validated by comparison to MCNP5 calculations. The method is also tested in combination with an internal temperature feedback module, which forms the inner part of a multi-physics coupling scheme in Serpent 2. The demo case for the coupled calculation is a reactivity-initiated accident (RIA) in PWR fuel. (authors)

  3. Type specimens of Crotalus scutulatus (Chordata: Reptilia: Squamata: Viperidae) re-examined, with new evidence after more than a century of confusion

    USGS Publications Warehouse

    Cardwell, Michael D.; Gotte, Steve W.; McDiarmid, Roy W.; Gilmore, Ned; Poindexter, James A.

    2013-01-01

    The original description of Crotalus scutulatus (Chordata: Reptilia: Squamata: Viperidae) was published in 1861 by Robert Kennicott, who did not identify a type specimen or a type locality. We review the history of specimens purported to be the type(s) and various designations of type locality. We provide evidence that ANSP 7069 (formerly one of two specimens of USNM 5027) is the holotype and that the appropriate type locality is Fort Buchanan, near present-day Sonoita, in Santa Cruz County, Arizona.

  4. SERPent: Automated reduction and RFI-mitigation software for e-MERLIN

    NASA Astrophysics Data System (ADS)

    Peck, Luke W.; Fenech, Danielle M.

    2013-08-01

    The Scripted E-merlin Rfi-mitigation PipelinE for iNTerferometry (SERPent) is an automated reduction and RFI-mitigation procedure utilising the SumThreshold methodology (Offringa et al., 2010a), originally developed for the LOFAR pipeline. SERPent is written in the Parseltongue language enabling interaction with the Astronomical Image Processing Software (AIPS) program. Moreover, SERPent is a simple 'out of the box' Python script, which is easy to set up and is free of compilers. In addition to the flagging of RFI affected visibilities, the script also flags antenna zero-amplitude dropouts and Lovell telescope phase calibrator stationary scans inherent to the e-MERLIN system. Both the flagging and computational performances of SERPent are presented here, for e-MERLIN commissioning datasets for both L-band (1.3-1.8 GHz) and C-band (4-8 GHz) observations. RFI typically amounts to <20%-25% for the more problematic L-band observations and <5% for the generally RFI quieter C-band. The level of RFI detection and flagging is more accurate and delicate than visual manual flagging, with the output immediately ready for AIPS calibration. SERPent is fully parallelised and has been tested on a range of computing systems. The current flagging rate is at 110 GB day-1 on a 'high-end' computer (16 CPUs, 100 GB memory) which amounts to ˜6.9 GB CPU-1 day-1, with an expected increase in performance when e-MERLIN has completed its commissioning. The refining of automated reduction and calibration procedures is essential for the e-MERLIN legacy projects and future interferometers such as the SKA and the associated pathfinders (MeerKAT and ASKAP), where the vast data sizes (>TB) make traditional astronomer interactions unfeasible.

  5. Contribution of mast cells and snake venom metalloproteinases to the hyperalgesia induced by Bothrops jararaca venom in rats.

    PubMed

    Bonavita, André Gustavo C; da Costa, Aline S; Pires, Ana Lucia A; Neves-Ferreira, Ana G C; Perales, Jonas; Cordeiro, Renato S B; Martins, Marco A; e Silva, Patrícia M R

    2006-06-15

    Bothrops jararaca venom (Bjv) is known to induce local inflammation and severe pain. Since, mast cells are able to secrete mediators involved in algesic processes, in this study we examined the putative role of these cells in the hyperalgesia triggered by Bjv in the rat paw. We noted that treatment with mast cell stabilizer sodium cromoglicate as well as with histamine and 5-hydroxytriptamine receptor antagonists meclizine and methysergide, respectively, inhibited the Bjv-induced hyperalgesia. In addition, we showed that stimulation of isolated rat peritoneal mast cells with Bjv in vitro resulted in the release of stored and neo-generated inflammatory mediators such as histamine and leukotriene C(4), respectively. Bjv-induced histamine secretion was clearly sensitive to treatment with sodium cromoglicate and sodium nedocromil. We further observed that metalloproteinase inhibitors 1,10-phenantroline and DM43 inhibited mast cell degranulation in vitro, under conditions where inhibitors of phospholipase A(2) as well as of serine- and cysteine-proteinases were inactive. Altogether, our findings indicate that mast cells seem to contribute to the hyperalgesia caused by Bjv in the rat paw, and also provide evidence that this response might be dependent on the ability of the Bjv to activate directly mast cells. PMID:16730041

  6. Quantitative and qualitative morphologic, cytochemical and ultrastructural characteristics of blood cells in the Crested Serpent eagle and Shikra.

    PubMed

    Salakij, Chaleow; Kasorndorkbua, Chaiyan; Salakij, Jarernsak; Suwannasaeng, Pimsuda; Jakthong, Pattarapong

    2015-08-01

    The Crested Serpent eagle (Spilornis cheela) is a bird of prey found in the tropical rain forest in Thailand. The Shikra (Accipiter badius) is a sparrow hawk and common resident in Thailand. Blood samples from 9 Crested Serpent eagles and 12 Shikras were obtained from September 2010 to November 2014. They were clinically healthy and negative for blood parasites detectable by light microscopy and molecular techniques (partial cytochrome b gene for avian malaria and partial 18S rRNA gene for trypanosome). Cytochemical staining (Sudan black B, peroxidase, α-naphthyl acetate esterase, and β-glucuronidase) and transmission electron microscopy were performed. Hematological results were reported as the mean ± standard deviation and median. Heterophils were the most prevalent leukocytes in the Crested Serpent eagle, but in the Shikra, lymphocytes were the most prevalent leukocytes. In the Shikra, some vacuoles were observed in the cytoplasm of the eosinophils. All blood cells in both types of raptors stained positively for β-glucuronidase but negatively for peroxidase. The ultrastructure of heterophils showed more clearly differentiate long rod granules in Crested Serpent eagle and spindle-shaped granules in Shikra. The ultrastructure of the eosinophils in the Crested Serpent eagle revealed varied electron-dense, round-shaped granules with round, different electron-dense areas in the centers of some granules, which differed from the structure reported for other raptors. These quantitative results may be useful for clinical evaluations of Crested Serpent eagles and Shikras that are undergoing rehabilitation for release. PMID:26563029

  7. Revised methods for few-group cross sections generation in the Serpent Monte Carlo code

    SciTech Connect

    Fridman, E.; Leppaenen, J.

    2012-07-01

    This paper presents new calculation methods, recently implemented in the Serpent Monte Carlo code, and related to the production of homogenized few-group constants for deterministic 3D core analysis. The new methods fall under three topics: 1) Improved treatment of neutron-multiplying scattering reactions, 2) Group constant generation in reflectors and other non-fissile regions and 3) Homogenization in leakage-corrected criticality spectrum. The methodology is demonstrated by a numerical example, comparing a deterministic nodal diffusion calculation using Serpent-generated cross sections to a reference full-core Monte Carlo simulation. It is concluded that the new methodology improves the results of the deterministic calculation, and paves the way for Monte Carlo based group constant generation. (authors)

  8. Subpopulations of mononuclear leukocytes associated with inhibition of Ehrlich ascites tumor growth by treatment with Bothrops jararaca venom.

    PubMed Central

    de Vieira Santos, Mariana Morena; da Silva, Reinaldo José; da Silva, Márcia Guimarães; Fecchio, Denise

    2004-01-01

    Snake venoms have been used as antineoplastic substances in several experimental models. We demonstrated in previous studies that Bothrops jararaca venom (BjV) induces inhibition of Ehrlich ascites tumor (EAT) growth accompanied by an increase of mononuclear (MN) leukocytes in all groups inoculated with EAT and/or venom. The objective of the present study was to characterize the subpopulations of MN leukocytes involved in the inhibition of EAT growth by treatment with BjV. Swiss mice were inoculated with 1.0x10(3) EAT cells by the intraperitoneal route and treated with 0.4 mg/kg of BjV by the same route (Group TV). Treatment was started 24 h after tumor cell inoculation and consisted of five intraperitoneal injections performed at 72 h intervals. After 2, 8 and 14 days, groups of animals were sacrificed and the number of B, TCD4 and TCD8 lymphocytes, macrophages and natural killer cells present in the peritoneal cavity was determined by flow cytometry. The control group consisted of animals inoculated with EAT and treated with 0.1 ml of saline under the same conditions as the experimental group (Group T). Two additional control groups consisted of animals not inoculated with EAT and treated with saline or venom. Data were analyzed statistically by the Kruskal-Wallis non-parametric test for independent samples. On the 2nd and 8th day we observed a difference between groups T and TV (group T > group TV) for all cell types, except natural killer cells, that only differed on the 2nd day. However, on the 14th day there was no difference in MN cells among groups. These data suggest that the inhibition of EAT is related to the toxic action of BjV on tumor cells and/or to the proteolytic effect of the venom on the mediators produced by the cells for growth modulation. PMID:15203562

  9. The central nervous system as target for antihypertensive actions of a proline-rich peptide from Bothrops jararaca venom.

    PubMed

    Lameu, Claudiana; Hayashi, Mirian A F; Guerreiro, Juliano R; Oliveira, Eduardo F; Lebrun, Ivo; Pontieri, Vera; Morais, Kátia L P; Camargo, Antonio C M; Ulrich, Henning

    2010-03-01

    Pyroglutamyl proline-rich oligopeptides, present in the venom of the pit viper Bothrops jararaca (Bj-PROs), are the first described naturally occurring inhibitors of the angiotensin I-converting enzyme (ACE). The inhibition of ACE by the decapeptide Bj-PRO-10c (

  10. An alternative micromethod to access the procoagulant activity of Bothrops jararaca venom and the efficacy of antivenom.

    PubMed

    Oguiura, N; Kapronezai, J; Ribeiro, T; Rocha, M M T; Medeiros, C R; Marcelino, J R; Prezoto, B C

    2014-11-01

    The assessment of the capacity of antivenoms to neutralize the lethal activity of snake venoms still relies largely on traditional rodent lethality assay (LD50). However, adequately validated in vitro tests should be introduced for assessing antivenom neutralizing capacity in plasma of immunized horses as well as for in-process quality control. The dynamic of fibrin formation in recalcified avian plasma samples is extremely slow, when compared to that presented by mammalian plasmas. In this study, we present one new coagulant assay, by performing dose-response curve after plotting the clotting time (CT) parameter of the ROTEM profile of recalcified chicken plasma samples (target) against semi-logarithmic doses of Bothrops jararaca venom (agonist), either in absence or in presence of the semi-logarithmic doses of anti-bothropic serum (ABS) (antagonist). The mean coagulant dose 50% (CD50) was defined as the quantity of venom (in μg) which reduces CT to 900 s, between minimum and maximum responses. The CT induced by 5CD50 of the venom was used as the control for calculating the effective dose (ED) of each batch of ABS. ED was defined as the ABS dose (nanoliters, nL) at which CT induced by one amount of venom corresponding to 5CD50 is displaced to the maximum threshold (1800 s). Five batches of the ABS, previously assayed for their lethality neutralizing activity (ED50) were assayed. The correlation coefficient (r) between both in vitro (ED) and in vivo (ED50) values was 0.87 (p value < 0.05). We propose this micro method as highly sensitive for characterization and quantification of possible procoagulant activity of small doses of snake venoms (nanograms) and for detecting small doses (nanoliters) of specific antibodies against this effect in little volume samples of biological fluids. PMID:25128708

  11. Venom-related transcripts from Bothrops jararaca tissues provide novel molecular insights into the production and evolution of snake venom.

    PubMed

    Junqueira-de-Azevedo, Inácio L M; Bastos, Carolina Mancini Val; Ho, Paulo Lee; Luna, Milene Schmidt; Yamanouye, Norma; Casewell, Nicholas R

    2015-03-01

    Attempts to reconstruct the evolutionary history of snake toxins in the context of their co-option to the venom gland rarely account for nonvenom snake genes that are paralogous to toxins, and which therefore represent important connectors to ancestral genes. In order to reevaluate this process, we conducted a comparative transcriptomic survey on body tissues from a venomous snake. A nonredundant set of 33,000 unigenes (assembled transcripts of reference genes) was independently assembled from six organs of the medically important viperid snake Bothrops jararaca, providing a reference list of 82 full-length toxins from the venom gland and specific products from other tissues, such as pancreatic digestive enzymes. Unigenes were then screened for nontoxin transcripts paralogous to toxins revealing 1) low level coexpression of approximately 20% of toxin genes (e.g., bradykinin-potentiating peptide, C-type lectin, snake venom metalloproteinase, snake venom nerve growth factor) in body tissues, 2) the identity of the closest paralogs to toxin genes in eight classes of toxins, 3) the location and level of paralog expression, indicating that, in general, co-expression occurs in a higher number of tissues and at lower levels than observed for toxin genes, and 4) strong evidence of a toxin gene reverting back to selective expression in a body tissue. In addition, our differential gene expression analyses identify specific cellular processes that make the venom gland a highly specialized secretory tissue. Our results demonstrate that the evolution and production of venom in snakes is a complex process that can only be understood in the context of comparative data from other snake tissues, including the identification of genes paralogous to venom toxins. PMID:25502939

  12. Venom-Related Transcripts from Bothrops jararaca Tissues Provide Novel Molecular Insights into the Production and Evolution of Snake Venom

    PubMed Central

    Junqueira-de-Azevedo, Inácio L.M.; Bastos, Carolina Mancini Val; Ho, Paulo Lee; Luna, Milene Schmidt; Yamanouye, Norma; Casewell, Nicholas R.

    2015-01-01

    Attempts to reconstruct the evolutionary history of snake toxins in the context of their co-option to the venom gland rarely account for nonvenom snake genes that are paralogous to toxins, and which therefore represent important connectors to ancestral genes. In order to reevaluate this process, we conducted a comparative transcriptomic survey on body tissues from a venomous snake. A nonredundant set of 33,000 unigenes (assembled transcripts of reference genes) was independently assembled from six organs of the medically important viperid snake Bothrops jararaca, providing a reference list of 82 full-length toxins from the venom gland and specific products from other tissues, such as pancreatic digestive enzymes. Unigenes were then screened for nontoxin transcripts paralogous to toxins revealing 1) low level coexpression of approximately 20% of toxin genes (e.g., bradykinin-potentiating peptide, C-type lectin, snake venom metalloproteinase, snake venom nerve growth factor) in body tissues, 2) the identity of the closest paralogs to toxin genes in eight classes of toxins, 3) the location and level of paralog expression, indicating that, in general, co-expression occurs in a higher number of tissues and at lower levels than observed for toxin genes, and 4) strong evidence of a toxin gene reverting back to selective expression in a body tissue. In addition, our differential gene expression analyses identify specific cellular processes that make the venom gland a highly specialized secretory tissue. Our results demonstrate that the evolution and production of venom in snakes is a complex process that can only be understood in the context of comparative data from other snake tissues, including the identification of genes paralogous to venom toxins. PMID:25502939

  13. Validation of the Serpent 2 code on TRIGA Mark II benchmark experiments.

    PubMed

    Ćalić, Dušan; Žerovnik, Gašper; Trkov, Andrej; Snoj, Luka

    2016-01-01

    The main aim of this paper is the development and validation of a 3D computational model of TRIGA research reactor using Serpent 2 code. The calculated parameters were compared to the experimental results and to calculations performed with the MCNP code. The results show that the calculated normalized reaction rates and flux distribution within the core are in good agreement with MCNP and experiment, while in the reflector the flux distribution differ up to 3% from the measurements. PMID:26516989

  14. Phospholipases a2 from Viperidae snakes: Differences in membranotropic activity between enzymatically active toxin and its inactive isoforms.

    PubMed

    Ghazaryan, Narine A; Ghulikyan, Lusine; Kishmiryan, Arsen; Andreeva, Tatyana V; Utkin, Yuri N; Tsetlin, Victor I; Lomonte, Bruno; Ayvazyan, Naira M

    2015-02-01

    We describe the interaction of various phospholipases A2 (PLA2) from snake venoms of the family Viperidae (Macrovipera lebetina obtusa, Vipera ursinii renardi, Bothrops asper) with giant unilamellar vesicles (GUVs) composed of natural brain phospholipids mixture, visualized through fluorescence microscopy. The membrane fluorescent probes 8-anilino-1-naphthalenesulfonicacid (ANS), LAUDRAN and PRODAN were used to assess the state of the membrane and specifically mark the lipid packing and membrane fluidity. Our results have shown that the three PLA2s which contain either of aspartic acid, serine, or lysine residues at position 49 in the catalytic center, have different effects on the vesicles. The PLA2 with aspartic acid at this position causes the oval deformation of the vesicles, while serine and lysine-containing enzymes lead to an appreciable increase of fluorescence intensity in the vesicles membrane, wherein the shape and dimensions of GUVs have not changed, but in this case GUV aggregation occurs. LAURDAN and PRODAN detect the extent of water penetration into the bilayer surface. We calculated generalized polarization function (GP), showing that for all cases (D49 PLA2, S49 PLA2 and K49 PLA2) both LAUDRAN and PRODAN GP values decrease. A higher LAURDAN GP is indicative of low water penetration in the lipid bilayer in case of K49 PLA2 compared with D49 PLA2, whereas the PRODAN mainly gives information when lipid is in liquid crystalline phase. PMID:25450350

  15. Validating the Serpent Model of FiR 1 Triga Mk-II Reactor by Means of Reactor Dosimetry

    NASA Astrophysics Data System (ADS)

    Viitanen, Tuomas; Leppänen, Jaakko

    2016-02-01

    A model of the FiR 1 Triga Mk-II reactor has been previously generated for the Serpent Monte Carlo reactor physics and burnup calculation code. In the current article, this model is validated by comparing the predicted reaction rates of nickel and manganese at 9 different positions in the reactor to measurements. In addition, track-length estimators are implemented in Serpent 2.1.18 to increase its performance in dosimetry calculations. The usage of the track-length estimators is found to decrease the reaction rate calculation times by a factor of 7-8 compared to the standard estimator type in Serpent, the collision estimators. The differences in the reaction rates between the calculation and the measurement are below 20%.

  16. A collision history-based approach to Sensitivity/Perturbation calculations in the continuous energy Monte Carlo code SERPENT

    SciTech Connect

    Giuseppe Palmiotti

    2015-05-01

    In this work, the implementation of a collision history-based approach to sensitivity/perturbation calculations in the Monte Carlo code SERPENT is discussed. The proposed methods allow the calculation of the eects of nuclear data perturbation on several response functions: the eective multiplication factor, reaction rate ratios and bilinear ratios (e.g., eective kinetics parameters). SERPENT results are compared to ERANOS and TSUNAMI Generalized Perturbation Theory calculations for two fast metallic systems and for a PWR pin-cell benchmark. New methods for the calculation of sensitivities to angular scattering distributions are also presented, which adopts fully continuous (in energy and angle) Monte Carlo estimators.

  17. HTGR Reactor Physics and Burnup Calculations Using the Serpent Monte Carlo Code

    SciTech Connect

    Leppanen, Jaakko; DeHart, Mark D

    2009-01-01

    One of the main advantages of the continuous-energy Monte Carlo method is its versatility and the capability to model any fuel or reactor configuration without major approximations. This capability becomes particularly valuable in studies involving innovative reactor designs and next-generation systems, which often lie beyond the capabilities of deterministic LWR transport codes. In this study, a conceptual prismatic HTGR fuel assembly was modeled using the Serpent Monte Carlo reactor physics burnup calculation code, under development at VTT Technical Research Centre of Finland since 2004. A new explicit particle fuel model was developed to account for the heterogeneity effects. The results are compared to other Monte Carlo and deterministic transport codes and the study also serves as a test case for the modules and methods in SCALE 6.

  18. [Sequencing and analysis of the complete mitochondrial genome of the King Cobra, Ophiophagus hannah (Serpents: Elapidae)].

    PubMed

    Chen, Nian; Lai, Xiao-Ping

    2010-07-01

    We obtained the complete mitochondrial genome of King Cobra(GenBank accession number: EU_921899) by Ex Taq-PCR, TA-cloning and primer-walking methods. This genome is very similar to other vertebrate, which is 17 267 bp in length and encodes 38 genes (including 13 protein-coding, 2 ribosomal RNA and 23 transfer RNA genes) and two long non-coding regions. The duplication of tRNA-Ile gene forms a new mitochondrial gene rearrangement model. Eight tRNA genes and one protein genes were transcribed from L strand, and the other genes were transcribed genes from H strand. Genes on the H strand show a fairly similar content of Adenosine and Thymine respectively, whereas those on the L strand have higher proportion of A than T. Combined rDNA sequence data (12S+16S rRNA) were used to reconstruct the phylogeny of 21 snake species for which complete mitochondrial genome sequences were available in the public databases. This large data set and an appropriate range of outgroup taxa demonstrated that Elapidae is more closely related to colubridae than viperidae, which supports the traditional viewpoints. PMID:20650853

  19. Identification and molecular characterization of five putative toxins from the venom gland of the snake Philodryas chamissonis (Serpentes: Dipsadidae).

    PubMed

    Urra, Félix A; Pulgar, Rodrigo; Gutiérrez, Ricardo; Hodar, Christian; Cambiazo, Verónica; Labra, Antonieta

    2015-12-15

    Philodryas chamissonis is a rear-fanged snake endemic to Chile. Its bite produces mild to moderate symptoms with proteolytic and anti-coagulant effects. Presently, the composition of the venom, as well as, the biochemical and structural characteristics of its toxins, remains unknown. In this study, we cloned and reported the first full-length sequences of five toxin-encoding genes from the venom gland of this species: Type III snake venom metalloprotease (SVMP), snake venom serine protease (SVSP), Cysteine-rich secretory protein (CRISP), α and β subunits of C-type lectin-like protein (CLP) and C-type natriuretic peptide (NP). These genes are highly expressed in the venom gland and their sequences exhibited a putative signal peptide, suggesting that these are components of the venom. These putative toxins had different evolutionary relationships with those reported for some front-fanged snakes, being SVMP, SVSP and CRISP of P. chamissonis closely related to the toxins present in Elapidae species, while NP was more related to those of Viperidae species. In addition, analyses suggest that the α and β subunits of CLP of P. chamissonis might have a α-subunit scaffold in common with Viperidae species, whose highly variable C-terminal region might have allowed the diversification in α and β subunits. Our results provide the first molecular description of the toxins possibly implicated in the envenomation of prey and humans by the bite of P. chamissonis. PMID:26410112

  20. Neutralization of the oedematogenic activity of Bothrops jararaca venom on the mouse paw by an antibothropic fraction isolated from opossum (Didelphis marsupialis) serum.

    PubMed

    Perales, J; Amorim, C Z; Rocha, S L; Domont, G B; Moussatché, H

    1992-11-01

    The pharmacological modulation of mice paw oedema produced by Bothrops jararaca venom (BJV) has been studied. Intraplantar injection of BJV (1-30 micrograms/paw) produced a dose- and time-related oedema, which was maximal 30 min after injection, reduced gradually thereafter and disappeared over 48 h. BJV heated at 100 degrees C for 5 or 15 min blocked local hemorrhage and caused partial inhibition of its oedematogenic activity. The BJV oedema was not inhibited by the anti-histamine meclizine, the inhibitor of histamine and serotonin, cyproheptadine, PAF-acether antagonist WEB 2170 or by the anti-leukotrienes C4/D4, LY 171883. Dexamethasone, aspirin, indomethacin, and the dual cyclooxygenase and lipoxygenase inhibitor BW 755C inhibited BJV-induced oedema indicating that arachidonic acid metabolism products via the cyclooxygenase pathway participate in its genesis and/or maintenance. The antibothropic fraction (ABF) (25-200 micrograms/paw) isolated from Didelphis marsupialis serum neutralized the oedema induced by the venom with and without heating, the hemorrhage induced by BJV and partially blocked the oedema induced by bradykinin and by cellulose sulphate. The oedema produced by histamine, serotonin, PAF-acether or leukotriene C4 was not inhibited. PMID:1295374

  1. The Anti-Inflammatory Effects of the Methanolic Extract and Fractions from Davilla elliptica St. Hil. (Dilleniaceae) on Bothrops jararaca Envenomation

    PubMed Central

    Nishijima, Catarine Massucato; Delella, Flavia Karina; Rodrigues, Clenilson Martins; Rinaldo, Daniel; Lopes-Ferreira, Monica Valdyrce dos Anjos; da Rocha, Lucia Regina Machado; Vilegas, Wagner; Felisbino, Sergio Luis; Hiruma-Lima, Clélia Akiko

    2015-01-01

    Inflammation and haemorrhage are the main characteristics of tissue injury in botropic envenomation. Although some studies have shown that anti-venom prevents systemic reactions, it is not efficient in preventing tissue injury at the site of the bite. Therefore, this work was undertaken to investigate the anti-inflammatory effects of the methanolic extract and fractions from D. elliptica and to evaluate the role of matrix metalloproteinases (MMPs) in this process. Effects of the extract and fractions from D. elliptica were evaluated using a carrageenan-induced paw oedema model in rats, and leukocyte rolling was visualized by intravital. The quantification of MMPs activities (MMP-2 and MMP-9) extracted from the dermis of mice treated with extract and fractions alone or incubated with venom was determined by zymographic analyses. Our results show that intraperitoneal (i.p.) injection of fractions significantly reduced paw oedema after the carrageenan challenge. Treatment with the tannins fraction also resulted in considerable inhibition of the rolling of leukocytes and this fraction was able to decrease the activation of MMP-9. These results confirmed the anti-inflammatory activity of the methanolic extract and tannins fraction of D. elliptica and showed that the dermonecrosis properties of B. jararaca venom might be mediated through the inhibition of MMP-9 activity. PMID:26042466

  2. Criticality calculations of the Very High Temperature reactor Critical Assembly benchmark with Serpent and SCALE/KENO-VI

    SciTech Connect

    Bostelmann, Friederike; Hammer, Hans R.; Ortensi, Javier; Strydom, Gerhard; Velkov, Kiril; Zwermann, Winfried

    2015-12-30

    Within the framework of the IAEA Coordinated Research Project on HTGR Uncertainty Analysis in Modeling, criticality calculations of the Very High Temperature Critical Assembly experiment were performed as the validation reference to the prismatic MHTGR-350 lattice calculations. Criticality measurements performed at several temperature points at this Japanese graphite-moderated facility were recently included in the International Handbook of Evaluated Reactor Physics Benchmark Experiments, and represent one of the few data sets available for the validation of HTGR lattice physics. Here, this work compares VHTRC criticality simulations utilizing the Monte Carlo codes Serpent and SCALE/KENO-VI. Reasonable agreement was found between Serpent and KENO-VI, but only the use of the latest ENDF cross section library release, namely the ENDF/B-VII.1 library, led to an improved match with the measured data. Furthermore, the fourth beta release of SCALE 6.2/KENO-VI showed significant improvements from the current SCALE 6.1.2 version, compared to the experimental values and Serpent.

  3. Criticality calculations of the Very High Temperature reactor Critical Assembly benchmark with Serpent and SCALE/KENO-VI

    DOE PAGESBeta

    Bostelmann, Friederike; Hammer, Hans R.; Ortensi, Javier; Strydom, Gerhard; Velkov, Kiril; Zwermann, Winfried

    2015-12-30

    Within the framework of the IAEA Coordinated Research Project on HTGR Uncertainty Analysis in Modeling, criticality calculations of the Very High Temperature Critical Assembly experiment were performed as the validation reference to the prismatic MHTGR-350 lattice calculations. Criticality measurements performed at several temperature points at this Japanese graphite-moderated facility were recently included in the International Handbook of Evaluated Reactor Physics Benchmark Experiments, and represent one of the few data sets available for the validation of HTGR lattice physics. Here, this work compares VHTRC criticality simulations utilizing the Monte Carlo codes Serpent and SCALE/KENO-VI. Reasonable agreement was found between Serpent andmore » KENO-VI, but only the use of the latest ENDF cross section library release, namely the ENDF/B-VII.1 library, led to an improved match with the measured data. Furthermore, the fourth beta release of SCALE 6.2/KENO-VI showed significant improvements from the current SCALE 6.1.2 version, compared to the experimental values and Serpent.« less

  4. Brain nitric oxide production by a proline-rich decapeptide from Bothrops jararaca venom improves baroreflex sensitivity of spontaneously hypertensive rats.

    PubMed

    Lameu, Claudiana; Pontieri, Vera; Guerreiro, Juliano R; Oliveira, Eduardo F; da Silva, Carlos Alberto; Giglio, Joyce M; Melo, Robson L; Campos, Ruy R; de Camargo, Antonio Carlos Martins; Ulrich, Henning

    2010-12-01

    Baroreflex sensitivity is disturbed in many people with cardiovascular diseases such as hypertension. Brain deficiency of nitric oxide (NO), which is synthesized by NO synthase (NOS) in the citrulline-NO cycle (with argininosuccinate synthase (ASS) activity being the rate-limiting step), contributes to impaired baroreflex. We recently showed that a decapeptide isolated from Bothrops jararaca snake venom, denoted Bj-PRO-10c, exerts powerful and sustained antihypertensive activity. Bj-PRO-10c promoted vasodilatation dependent on the positive modulation of ASS activity and NO production in the endothelium, and also acted on the central nervous system, inducing the release of GABA and glutamate, two important neurotransmitters in the regulation of autonomic systems. We evaluated baroreflex function using the regression line obtained by the best-fit points of measured heart rate (HR) and mean arterial pressure (MAP) data from spontaneously hypertensive rats (SHRs) treated with Bj-PRO-10c. We also investigated molecular mechanisms involved in this effect, both in vitro and in vivo. Bj-PRO-10c mediated an increase in baroreflex sensitivity and a decrease in MAP and HR. The effects exerted by the peptide include an increase in the gene expression of endothelial NOS and ASS. Bj-PRO-10c-induced NO production depended on intracellular calcium fluxes and the activation of a G(i/o)-protein-coupled metabotropic receptor. Bj-PRO-10c induced NO production and the gene expression of ASS and endothelial NOS in the brains of SHRs, thereby improving baroreflex sensitivity. Bj-PRO-10c may reveal novel approaches for treating diseases with impaired baroreflex function. PMID:21132021

  5. Un nouveau serpent bipède du Cénomanien (Crétacé). Implications phylétiques

    NASA Astrophysics Data System (ADS)

    Rage, Jean-Claude; Escuillié, François

    2000-04-01

    A new bipedal snake from the Cenomanian (Cretaceous). Phylogenetic implications. A new bipedal snake is described as Podophis descouensi gen. et sp. nov. Like Pachyrhachis problematicus, the only other bipedal snake, it comes from the Cenomanian of the Middle East. It provides data not revealed in Pachyrhachis and it confirms that bipedal snakes are basal Ophidia. It is not possible to assess whether these two bipedal snakes make up a monophyletic group (sister-taxon to the Serpentes) or a paraphyletic assemblage (stem group of the Serpentes).

  6. Epidemiology of venomous and semi-venomous snakebites (Ophidia: Viperidae, Colubridae) in the Kashan city of the Isfahan province in Central Iran

    PubMed Central

    Dehghani, Rouhullah; Mehrpour, Omid; Shahi, Morteza Panjeh; Jazayeri, Mehrdad; Karrari, Parissa; Keyler, Dan; Zamani, Nasim

    2014-01-01

    Background: Information on the epidemiology of venomous snake species responsible for envenomation to humans in Iran has not been well documented. In the Kashan city, venomous snakebite remains a recurring medical problem. Information providing the correct identification of snake species responsible for envenomation in this geographic region would be useful to regional medical clinics and personnel for the effective and optimal management of the patients. Materials and Methods: In this cross-sectional study, all patient data was collected from Kashan city and its suburbs. The specific data relating to the taxonomic identification of snakes responsible for envenomation were evaluated. A general approach to the diagnosis and management of patients was also provided. Snakes responsible for bites were transported to a laboratory, where their taxonomic classification was confirmed based on key anatomical features and morphological characteristics. Results: A total of 46 snakes were examined. Of these, 37 (80%) were non-venomous species, and 9 (20%) were identified as venomous. Seven of the nine venomous snake species (78%) were of the family Viperidae, and two specimens (22%) were in the family Colubridae. Specifically, the viperid species were Macrovipera lebetina obtusa, Pseudocerastes persicus, Pseudocerastes fieldi, and Echis carinatus. The two colubrid species were Malpolon monspessulanus insignitus and Psammophis schkari. Conclusion: Five different species of venomous snakes responsible for envenomation in the Kashan city region were confirmed. The viper, P. fieldi, was reported for the first time in the central part of Iran. PMID:24672563

  7. First report of parasitism by Hexametra boddaertii (Nematoda: Ascaridae) in Oxyrhopus guibei (Serpentes: Colubridae).

    PubMed

    Peichoto, María E; Sánchez, Matías N; López, Ariel; Salas, Martín; Rivero, María R; Teibler, Pamela; Toledo, Gislayne de Melo; Tavares, Flávio L

    2016-07-15

    The current study summarizes the postmortem examination of a specimen of Oxyrhopus guibei (Serpentes, Colubridae) collected in Iguazu National Park (Argentina), and found deceased a week following arrival to the serpentarium of the National Institute of Tropical Medicine (Argentina). Although the snake appeared to be in good health, a necropsy performed following its death identified the presence of a large number of roundworms in the coelomic cavity, with indications of peritonitis and serosal adherence. Additional observations from the necropsy revealed small calcifications in the mesothelium of the coelomic cavity; solid and expressive content in the gallbladder; massive gastrointestinal obstruction due to nematodes; and lung edema and congestion. Histopathological analyses of lung sections also showed proliferative heterophilic and histiocytic pneumonia. Parasites isolated from both the intestine and coelomic cavity were identified as Hexametra boddaertii by a combination of light and scanning electron microscopic examination. Results from this necropsy identify O. guibei as a new host for H. boddaertii, and is the first report of a natural infection by Hexametra in Argentina. Since Hexametra parasites may contribute to several pathological conditions in humans, and with the recent availability of O. guibei specimens through the illegal pet trade, it is necessary to consider the possibility of zoonotic helminth transmission of Hexametra from snake to human. PMID:27270391

  8. Internal neutronics-temperature coupling in Serpent 2 - Reactivity differences resulting from choice of material property correlations

    SciTech Connect

    Valtavirta, V.

    2013-07-01

    This paper describes the unique way of simultaneously solving the power and temperature distributions of a nuclear system with the Monte Carlo neutron transport code Serpent 2. The coupled solution is achieved through the implementation of an internal temperature solver and material property correlations in the code. The program structure is reviewed concerning the temperature solver and the internal correlations as well as the internal coupling between these two and the neutron transport part. To estimate the reactivity differences resulting from correlation choices a simple pin-cell case has been calculated. It is established, that some correlation choices may result in difference in reactivity of approximately 100 pcm. (authors)

  9. Molecular cloning and characterization of satellite DNA sequences from constitutive heterochromatin of the habu snake (Protobothrops flavoviridis, Viperidae) and the Burmese python (Python bivittatus, Pythonidae).

    PubMed

    Matsubara, Kazumi; Uno, Yoshinobu; Srikulnath, Kornsorn; Seki, Risako; Nishida, Chizuko; Matsuda, Yoichi

    2015-12-01

    Highly repetitive DNA sequences of the centromeric heterochromatin provide valuable molecular cytogenetic markers for the investigation of genomic compartmentalization in the macrochromosomes and microchromosomes of sauropsids. Here, the relationship between centromeric heterochromatin and karyotype evolution was examined using cloned repetitive DNA sequences from two snake species, the habu snake (Protobothrops flavoviridis, Crotalinae, Viperidae) and Burmese python (Python bivittatus, Pythonidae). Three satellite DNA (stDNA) families were isolated from the heterochromatin of these snakes: 168-bp PFL-MspI from P. flavoviridis and 196-bp PBI-DdeI and 174-bp PBI-MspI from P. bivittatus. The PFL-MspI and PBI-DdeI sequences were localized to the centromeric regions of most chromosomes in the respective species, suggesting that the two sequences were the major components of the centromeric heterochromatin in these organisms. The PBI-MspI sequence was localized to the pericentromeric region of four chromosome pairs. The PFL-MspI and the PBI-DdeI sequences were conserved only in the genome of closely related species, Gloydius blomhoffii (Crotalinae) and Python molurus, respectively, although their locations on the chromosomes were slightly different. In contrast, the PBI-MspI sequence was also in the genomes of P. molurus and Boa constrictor (Boidae), and additionally localized to the centromeric regions of eight chromosome pairs in B. constrictor, suggesting that this sequence originated in the genome of a common ancestor of Pythonidae and Boidae, approximately 86 million years ago. The three stDNA sequences showed no genomic compartmentalization between the macrochromosomes and microchromosomes, suggesting that homogenization of the centromeric and/or pericentromeric stDNA sequences occurred in the macrochromosomes and microchromosomes of these snakes. PMID:26205503

  10. A Place of Transformation: Lessons from the Cosmic Serpent Informal Science Education Professional Development Project

    NASA Astrophysics Data System (ADS)

    Peticolas, L.; Maryboy, N.; Begay, D.; Stein, J.; Valdez, S.; Paglierani, R.

    2012-08-01

    A cultural disconnect exists between Western scientists and educators and Native communities in terms of scientific worldviews and Indigenous ways of knowing. This cultural disconnect manifests itself in the lack of participation of Native Americans in Western science and a lack of appreciation by Western scientists of Native science. Our NSF-Funded project "Cosmic Serpent: Bridging Native and Western Learning in Museum Settings" set out to provide a way for informal science education practitioners and tribal museum practitioners to learn about these two worldviews in such a way as to inform their educational practice around these concepts. We began with a pilot workshop in year one of this four-year project. We then provided two week-long professional development workshops in three regions within the Western U.S., and culminated with a final conference for all participants. In total, the workshops served 162 participants, including 115 practitioners from 19 tribal museums and 41 science, natural history, and cultural museums; 23 tribal community members; and 24 "bridge people" with knowledge of both Indigenous and Western science. For this article, we focus on the professional and personal transformations around culture, knowledge, science, and worldviews that occurred as a part of this project. We evaluated the collaborative aspects of this grant between the Indigenous Education Institute; the Center for Science Education at the University of California, Berkeley; the Institute for Learning Innovation; Native Pathways; Association for Science and Technology Centers; and the National Museum of the American Indian. Using evaluation results, as well as our personal reflections, we share our learnings from a place of transformation. We provide lessons we learned with this project, which we hope others will find relevant to their own science education work.

  11. A new species of Eimeria (Apicomplexa: Eimeriidae) from the western hognose snake, Heterodon nasicus (Serpentes: Xenodontidae), from Texas.

    PubMed

    Daszak, Peter; Ball, Stanley J; Streicker, Daniel G; Snow, Keith R

    2011-06-01

    A new species of coccidian (Apicomplexa: Eimeriidae) is described from the feces of a western hognose snake Heterodon nasicus (Serpentes: Xenodontidae) collected from Texas, and housed in the collection of the Zoological Society of London. Oocysts of Eimeria mchenryi n. sp. are cylindrical, 35.0 ± SD 1.4 (32-37) × 17.0 ± 0.7 (16-18) µm; the shape index (length/width) is 2.05. A micropyle, oocyst residuum, and polar granule are absent. Sporocysts are subspherical 9.3 (7-11.5) × 7.7 (6-9) µm, with a shape index of 1.2. There is a sporocyst residuum, but the new species is lacking Stieda bodies. The new species is distinct from those previously named from the Xenodontidae and the allied family, Colubridae. PMID:21506855

  12. Discovery of microscopic evidence for shock metamorphism at the Serpent Mound structure, south-central Ohio: Confirmation of an origin by impact

    USGS Publications Warehouse

    Carlton, R.W.; Koeberl, C.; Baranoski, M.T.; SchuMacHer, G.A.

    1998-01-01

    The origin of the Serpent Mound structure in south-central Ohio has been disputed for many years. Clearly, more evidence was needed to resolve the confusion concerning the origin of the Serpent Mound feature either by endogenic processes or by hypervelocity impact. A petrographic study of 21 samples taken from a core 903 m long drilled in the central uplift of the structure provides evidence of shock metamorphism in the form of multiple sets of planar deformation features in quartz grains, as well as the presence of clasts of altered impact-melt rock. Crystallographic orientations of the planar deformation features show maxima at the shock-characteristic planes of {101??3} and {101??2} and additional maxima at {101??1}, {213??1}, and {516??1}. Geochemical analyses of impact breccias show minor enrichments in the abundances of the siderophile elements Cr, Co, Ni, and Ir, indicating the presence of a minor meteoritic component.

  13. Anesthesia with Isoflurane and Sevoflurane in the Crested Serpent Eagle (Spilornis cheela hoya): Minimum Anesthetic Concentration, Physiological Effects, Hematocrit, Plasma Chemistry and Behavioral Effects

    PubMed Central

    CHAN, Fang-Tse; CHANG, Geng-Ruei; WANG, Hsien-Chi; HSU, Tien-Huan

    2013-01-01

    ABSTRACT The initial goal of this study was to determine the minimum anesthetic concentration (MAC) for isoflurane (ISO) and sevoflurane (SEVO) for the crested serpent eagle. Next, we compared the anesthetic effects of each on the physiological effects, hematocrit, plasma chemistry values and behavior in spontaneously breathing captive adult crested serpent eagles. Sixteen eagles were randomly allocated to two groups for anesthesia with ISO (n=8) or SEVO (n=8). First, we measured the MAC values of ISO and SEVO, and four weeks later, we investigated the effect of each on the physiological effects, hematocrit (HCT) and plasma chemistry values. The MAC values of ISO and SEVO for crested serpent eagles were 1.46 ± 0.30 and 2.03 ± 0.32%, respectively. The results revealed no significant differences between the two anesthetics in induction time, while time of extubation to recovery was significantly shorter with SEVO. A time-related increase in end-tidal CO2 and decreases in body temperature and respiratory rates were observed during anesthesia with each anesthetic. There were no significant differences between the effect of the two anesthetics on heart rate, hematocrit, plasma chemistry values or respiration, although each caused minor respiration depression. We concluded that SEVO is a more effective inhalant agent than ISO for use in eagles, showing the most rapidest induction and recovery from anesthesia. PMID:23955396

  14. Bothrops jararaca venom (BjV) induces differential leukocyte accumulation in mice genetically selected for acute inflammatory reaction: the role of host genetic background on expression of adhesion molecules and release of endogenous mediators.

    PubMed

    Carneiro, Adriana S; Ribeiro, Orlando G; Cabrera, Wafa H K; Vorraro, Francisca; De Franco, Marcelo; Ibañez, Olga M; Starobinas, Nancy

    2008-10-01

    The dynamics of the local inflammatory events induced by Bothrops jararaca venom (BjV) inoculation in footpad of mice genetically selected for maximal (AIRmax) and minimal (AIRmin) acute inflammatory reactivity (AIR) was investigated. The BjV injection induced a marked inflammatory cell infiltrate with predominance of neutrophils, with increased blood cell numbers before its accumulation, suggesting a stimulatory action of BjV on mechanisms of cell mobilization from bone marrow. The process of cell migration is regulated by different cell-adhesion molecules (CAM). Our results showed that neutrophil cells from both lines had the same pattern of response concerning CAMs expression, presenting the involvement of l-selectin, Mac-1 and PECAM-1 adhesion molecules in BjV-induced neutrophil accumulation. The effect of BjV on the release of pro-inflammatory cytokines and chemokines related with cellular migration was also studied and IL-1beta, IL-6, TNF-alpha and MIP-2 levels could be detected after venom injection. The AIRmax mice were shown to be more responsive than AIRmin with respect to leukocyte influx, expression of MIP-2 and release of IL-1beta and IL-6. These results demonstrate the importance of host genetic background in the local response and the involvement of alleles accumulated in AIRmax mice in the inflammatory events induced by BjV. PMID:18723041

  15. The Descent of the Serpent: Using a Successful Ancient Solar Observatories Webcast from Chichen Itza to Highlight Space Weather Research

    NASA Astrophysics Data System (ADS)

    Hawkins, I.; Higdon, R.; Cline, T.

    2006-12-01

    Over the past seven years, NASA's Sun-Earth Connection Education Forum has sponsored and coordinated education and public outreach events to highlight NASA's heliophysics research and discoveries. Our strategy involves using celestial events, such as total solar eclipses and the Transit of Venus, as well as Sun-Earth Day during the March Equinox, to engage K-12 schools and the general public in space science activities, demonstrations, and interactions with space scientists. In collaboration with partners that include the Exploratorium and other museums, Ideum, NASA TV, NASA heliophysics missions, and others, we produce webcasts, other multi-media, and print resources for use by school and informal educators nation-wide and internationally. We provide training and professional development to K-12 educators, museum personnel, amateur astronomers, Girl Scout leaders, etc., so they can implement their own outreach programs taking advantage of our resources. A coordinated approach promotes multiple programs occurring each year under a common theme. As part of an Ancient Observatories theme in 2005, we have successfully featured solar alignments with ancient structures made by indigenous cultures that mark the equinoxes and/or solstices in cultural and historical parks in the Americas. In partnership with the Exploratorium, we produced broadcast-quality and webcast programming during the March equinox that shared heliophysics within a broad cultural context with formal and informal education audiences internationally. The program: "Descent of the Serpent" featured the light and shadow effect at sunset that takes place during the spring equinox at the Pyramid of El Castillo, in Chichén Itzá (México). This program made unique and authentic cultural connections to the knowledge of solar astronomy of the Maya, the living Mayan culture of today, and the importance of the Sun across the ages. We involved Sun-Earth Connection scientists, their missions, and research

  16. An extended version of the SERPENT-2 code to investigate fuel burn-up and core material evolution of the Molten Salt Fast Reactor

    NASA Astrophysics Data System (ADS)

    Aufiero, M.; Cammi, A.; Fiorina, C.; Leppänen, J.; Luzzi, L.; Ricotti, M. E.

    2013-10-01

    In this work, the Monte Carlo burn-up code SERPENT-2 has been extended and employed to study the material isotopic evolution of the Molten Salt Fast Reactor (MSFR). This promising GEN-IV nuclear reactor concept features peculiar characteristics such as the on-line fuel reprocessing, which prevents the use of commonly available burn-up codes. Besides, the presence of circulating nuclear fuel and radioactive streams from the core to the reprocessing plant requires a precise knowledge of the fuel isotopic composition during the plant operation. The developed extension of SERPENT-2 directly takes into account the effects of on-line fuel reprocessing on burn-up calculations and features a reactivity control algorithm. It is here assessed against a dedicated version of the deterministic ERANOS-based EQL3D procedure (PSI-Switzerland) and adopted to analyze the MSFR fuel salt isotopic evolution. Particular attention is devoted to study the effects of reprocessing time constants and efficiencies on the conversion ratio and the molar concentration of elements relevant for solubility issues (e.g., trivalent actinides and lanthanides). Quantities of interest for fuel handling and safety issues are investigated, including decay heat and activities of hazardous isotopes (neutron and high energy gamma emitters) in the core and in the reprocessing stream. The radiotoxicity generation is also analyzed for the MSFR nominal conditions. The production of helium and the depletion in tungsten content due to nuclear reactions are calculated for the nickel-based alloy selected as reactor structural material of the MSFR. These preliminary evaluations can be helpful in studying the radiation damage of both the primary salt container and the axial reflectors.

  17. Serpent, Suppressor of Hairless and U-shaped are crucial regulators of hedgehog niche expression and prohemocyte maintenance during Drosophila larval hematopoiesis

    PubMed Central

    Tokusumi, Yumiko; Tokusumi, Tsuyoshi; Stoller-Conrad, Jessica; Schulz, Robert A.

    2010-01-01

    The lymph gland is a specialized organ for hematopoiesis, utilized during larval development in Drosophila. This tissue is composed of distinct cellular domains populated by blood cell progenitors (the medullary zone), niche cells that regulate the choice between progenitor quiescence and hemocyte differentiation [the posterior signaling center (PSC)], and mature blood cells of distinct lineages (the cortical zone). Cells of the PSC express the Hedgehog (Hh) signaling molecule, which instructs cells within the neighboring medullary zone to maintain a hematopoietic precursor state while preventing hemocyte differentiation. As a means to understand the regulatory mechanisms controlling Hh production, we characterized a PSC-active transcriptional enhancer that drives hh expression in supportive niche cells. Our findings indicate that a combination of positive and negative transcriptional inputs program the precise PSC expression of the instructive Hh signal. The GATA factor Serpent (Srp) is essential for hh activation in niche cells, whereas the Suppressor of Hairless [Su(H)] and U-shaped (Ush) transcriptional regulators prevent hh expression in blood cell progenitors and differentiated hemocytes. Furthermore, Srp function is required for the proper differentiation of niche cells. Phenotypic analyses also indicated that the normal activity of all three transcriptional regulators is essential for maintaining the progenitor population and preventing premature hemocyte differentiation. Together, these studies provide mechanistic insights into hh transcriptional regulation in hematopoietic progenitor niche cells, and demonstrate the requirement of the Srp, Su(H) and Ush proteins in the control of niche cell differentiation and blood cell precursor maintenance. PMID:20876645

  18. Detection of calcium-binding proteins in venom and Duvernoy's glands of South American snakes and their secretions.

    PubMed

    Gonçalves, L R; Yamanouye, N; Nuñez-Burgos, G B; Furtado, M F; Britto, L R; Nicolau, J

    1997-10-01

    Calcium-binding proteins (CaBPs) have been described as involved in the stimulus-secretion coupling mechanisms in secretory glands. CaBPs were revealed with 45Ca, after electrophoresis in SDS-PAGE and transference to Zeta probe membranes, in Duvernoy's or venom gland homogenates from three families of South American snakes: Viperidae (Bothrops jararaca and Crotalus durissus terrificus); Elapidae (Micrurus corallinus), and Colubridae (Phylodrias patagoniensis and Oxyrhopus trigeminus). A band with an estimated molecular weight of 12 KDa was found in all glands studied. Bands with 17, 28, and 67 KDa were found in all glands, except in O. trigeminus Duvernoy's gland. A 18 KDa band was found in Viperidae and Elapidae venom glands, and a 88 KDa band was observed only in Viperidae venom gland homogenates. Some of these CaBPs were identified by Western blotting or by immunohistochemistry, as parvalbumin (12 KDa) and calbindin (28 KDa). When the secretion of these glands were analyzed, CaBPs were detected only in B. jararaca venom, with bands of 14, 35, 42, and 72 KDa. The profile of CaBPs was not modified at different phases of the secretory cycle of the glands, as well as after isoproterenol treatment. PMID:9440247

  19. Complete mitochondrial genome of Sinovipera sichuanensis (Reptilia: Squamata: Viperidae).

    PubMed

    Zhu, Fei; Liu, Qin; Zhong, Guanghui; Xiao, Rong; Fang, Min; Guo, Peng

    2016-09-01

    Sinovipera sichuanensis is one of the Asian green pit vipers with less concern. It is endemic to China and only known in Hejiang, Sichuan Province and Jiangkou, Guizhou Province. In this study, we report the complete mitochondrial genome and characterize each partition. The complete mitochondrial genome is 17 225 bp in length containing 2 rRNAs, 13 protein-coding genes, 2 control regions and 22 tRNAs. We use Bayesian Inference (BI) and Maximum Likelihood (ML) methods to infer the phylogenetic relationship of S. sichuanensis. Both BI and ML analyses strongly support that S. sichuanensis is independent from the other two Asian green pit vipers. PMID:26406352

  20. Body Size Evolution in Insular Speckled Rattlesnakes (Viperidae: Crotalus mitchellii)

    PubMed Central

    Meik, Jesse M.; Lawing, A. Michelle; Pires-daSilva, André

    2010-01-01

    Background Speckled rattlesnakes (Crotalus mitchellii) inhabit multiple islands off the coast of Baja California, Mexico. Two of the 14 known insular populations have been recognized as subspecies based primarily on body size divergence from putative mainland ancestral populations; however, a survey of body size variation from other islands occupied by these snakes has not been previously reported. We examined body size variation between island and mainland speckled rattlesnakes, and the relationship between body size and various island physical variables among 12 island populations. We also examined relative head size among giant, dwarfed, and mainland speckled rattlesnakes to determine whether allometric differences conformed to predictions of gape size (and indirectly body size) evolving in response to shifts in prey size. Methodology/Principal Findings Insular speckled rattlesnakes show considerable variation in body size when compared to mainland source subspecies. In addition to previously known instances of gigantism on Ángel de la Guarda and dwarfism on El Muerto, various degrees of body size decrease have occurred frequently in this taxon, with dwarfed rattlesnakes occurring mostly on small, recently isolated, land-bridge islands. Regression models using the Akaike information criterion (AIC) showed that mean SVL of insular populations was most strongly correlated with island area, suggesting the influence of selection for different body size optima for islands of different size. Allometric differences in head size of giant and dwarf rattlesnakes revealed patterns consistent with shifts to larger and smaller prey, respectively. Conclusions/Significance Our data provide the first example of a clear relationship between body size and island area in a squamate reptile species; among vertebrates this pattern has been previously documented in few insular mammals. This finding suggests that selection for body size is influenced by changes in community dynamics that are related to graded differences in area over what are otherwise similar bioclimatic conditions. We hypothesize that in this system shifts to larger prey, episodic saturation and depression of primary prey density, and predator release may have led to insular gigantism, and that shifts to smaller prey and increased reproductive efficiency in the presence of intense intraspecific competition may have led to insular dwarfism. PMID:20209105

  1. The Plumed Serpent and the Red Atlantis.

    ERIC Educational Resources Information Center

    Willard, William

    1988-01-01

    Examines work of author D.H. Lawrence and John Collier, later Bureau of Indian Affairs Commissioner, during 1920s when they stayed as Mabel Dodge Luhan's guests in Taos, New Mexico. Examines their perceptions of Pueblo Indian culture, federal-Indian relationship, and Indian influences on Lawrence's and Collier's work. (TES)

  2. A bradykinin-potentiating peptide (BPP-10c) from Bothrops jararaca induces changes in seminiferous tubules

    PubMed Central

    2013-01-01

    Background The testis-specific isoform of angiotensin-converting enzyme (tACE) is exclusively expressed in germ cells during spermatogenesis. Although the exact role of tACE in male fertility is unknown, it clearly plays a critical function in spermatogenesis. The dipeptidase domain of tACE is identical to the C-terminal catalytic domain of somatic ACE (sACE). Bradykinin potentiating peptides (BPPs) from snake venoms are the first natural sACE inhibitors described and their structure–activity relationship studies were the basis for the development of antihypertensive drugs such as captopril. In recent years, it has been showed that a number of BPPs – including BPP-10c – are able to distinguish between the N- and C-active sites of sACE, what is not applicable to captopril. Considering the similarity between tACE and sACE (and since BPPs are able to distinguish between the two active sites of sACE), the effects of the BPP-10c and captopril on the structure and function of the seminiferous epithelium were characterized in the present study. BPP-10c and captopril were administered in male Swiss mice by intraperitoneal injection (4.7 μmol/kg for 15 days) and histological sections of testes were analyzed. Classification of seminiferous tubules and stage analysis were carried out for quantitative evaluation of germ cells of the seminiferous epithelium. The blood-testis barrier (BTB) permeability and distribution of claudin-1 in the seminiferous epithelium were analyzed by hypertonic fixative method and immunohistochemical analyses of testes, respectively. Results The morphology of seminiferous tubules from animals treated with BPP-10c showed an intense disruption of the epithelium, presence of atypical multinucleated cells in the lumen and degenerated germ cells in the adluminal compartment. BPP-10c led to an increase in the number of round spermatids and total support capacity of Sertoli cell in stages I, V, VII/VIII of the seminiferous epithelium cycle, without affecting BTB permeability and the distribution of claudin-1 in the seminiferous epithelium. Interestingly, no morphological or morphometric alterations were observed in animals treated with captopril. Conclusions The major finding of the present study was that BPP-10c, and not captopril, modifies spermatogenesis by causing hyperplasia of round spermatids in stages I, V, and VII/VIII of the spermatogenic cycle. PMID:24195771

  3. The complete mitochondrial genome of Gloydius intermedius (Squamata: Viperidae: Crotalinae) from China.

    PubMed

    Xu, Chunzhu; Zhao, Shuai; Li, Cheng; Dou, Huashan

    2016-07-01

    The mitochondrial genome sequence of Gloydius intermedius is analyzed and presented for the first time. The genome was 17, 226 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 2 control region. The overall base composition was A (32.4%), C (28.8%), T (25.9%), and G (12.9%). The base compositions clearly presented the A-C skew, which was most obvious in the protein-coding genes. The extended termination-associated sequence domain, the central conserved domain and the conserved sequence block domain are defined in the mitochondrial genome control region of G. intermedius. Mitochondrial genome analyses based on MP, ML, NJ and Bayesian analyses yielded identical phylogenetic trees, indicating a close phylogenetic affinity of the 13 Crotalinae species. It appeared that no less than two major phyletic lineages were present in Crotalinae. The main clades within the Crotalinae supported are: A clade including the Protobothrops. A clade (G. brevicaudus, G. ussuriensis, G. intermedius, G. saxatilis) with the Ovophis appeared as the sister taxon to Protobothrops and was supported by bootstrap values of 88%. The four Gloydius species formed a paraphyletic group with the high bootstrap value (100 %) in all examinations. PMID:26006286

  4. Sequencing and analysis of the complete mitochondrial genome of Gloydius saxatilis (Squamata: Viperidae: Crotalinae).

    PubMed

    Xu, Chunzhu; Xie, Fei; Liu, Yichen; Zhao, Shuai; Wang, Yongsheng; Ma, Teng; Zhao, Tianqing

    2016-07-01

    The mitochondrial genome sequence of Gloydius saxatilis is analyzed and presented for the public for the first time. The genome was 17,218 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 2 control regions. The overall base composition was A (32.3%), C (28.9%), T (25.8%), and G (13.0%). The base compositions presented clearly the A-C skew, which was most obviously in the protein-coding genes. The extended termination-associated sequence domain, the central conserved domain and the conserved sequence block domain are defined in the mitochondrial genome control region of G. saxatilis. Mitochondrial genomes analyses based on MP, ML, NJ and Bayesian analyses yielded identical phylogenetic trees, indicating a close phylogenetic affinity of the thirteen Crotalinae species. It appeared that no less than two major phyletic lineages were present in Crotalinae. The main clades within the Crotalinae supported are: A clade including the Protobothrops. A clade (G. brevicaudus, G. ussuriensis, G. intermedius, G. saxatilis) with the Ovophis as the sister taxon to Protobothrops and was supported by bootstrap values of 88%. The four Gloydius species formed a paraphyletic group with the high bootstrap value (100%) in all examinations. PMID:25806581

  5. Diversity-dependent cladogenesis throughout western Mexico: Evolutionary biogeography of rattlesnakes (Viperidae: Crotalinae: Crotalus and Sistrurus).

    PubMed

    Blair, Christopher; Sánchez-Ramírez, Santiago

    2016-04-01

    Rattlesnakes (Crotalus and Sistrurus) represent a radiation of approximately 42 species distributed throughout the New World from southern Canada to Argentina. Interest in this enigmatic group of snakes continues to accrue due, in part, to their ecomorphological diversity, contributions to global envenomations, and potential medicinal importance. Although the group has garnered substantial attention from systematists and evolutionary biologists for decades, little is still known regarding patterns of lineage diversification. In addition, few studies have statistically quantified broad-scale biogeographic patterns in rattlesnakes to ascertain how dispersal occurred throughout the New World, particularly among the different major biomes of the Americas. To examine diversification and biogeographic patterns in this group of snakes we assemble a multilocus data set consisting of over 6700bp encompassing three nuclear loci (NT-3, RAG-1, C-mos) and seven mitochondrial genes (12S, 16S, ATPase6, ATPase8, ND4, ND5, cytb). Fossil-calibrated phylogenetic and subsequent diversification rate analyses are implemented using maximum likelihood and Bayesian inference, to examine their evolutionary history and temporal dynamics of diversity. Based on ancestral area reconstructions we explore dispersal patterns throughout the New World. Cladogenesis occurred predominantly during the Miocene and Pliocene with only two divergences during the Pleistocene. Two different diversification rate models, advocating diversity-dependence, are strongly supported. These models indicate an early rapid radiation followed by a recent speciation rate decline. Biogeographic analyses suggest that the high elevation pine-oak forests of western Mexico served as a major speciation pump for the majority of lineages, with the desert biome of western North America colonized independently at least twice. All together, these results provide evidence for rapid diversification of rattlesnakes throughout the Mexican highlands during the Neogene, likely in response to continual orogenesis of Mexico's major mountain systems, followed by more recent dispersal into desert and tropical biomes. PMID:26802208

  6. Serpentized mantle at rifted margins: The Goban Spur example

    NASA Astrophysics Data System (ADS)

    Bullock, A. D.; Minshull, T. A.

    2002-12-01

    The crustal structure of rifted continental margins can tell us about the processes that operated from continental extension to eventual break-up and sea floor spreading. Variations between margins may record different processes operating during extension or indicate changes in the external geological controls such as mantle plume influence. Extension between Europe and North America began in the mid Cretaceous, dated at the Goban Spur-Flemish Cap rift as late Hauterivian-early Barremian (126-128 Ma) from deep sea drilling (DSDP leg 80) results on the Goban Spur margin. Marine magnetic anomaly 34 can be identified clearly on both margins and indicates that sea floor spreading began no later than 83 Ma. Syn-rift volcanism is limited to a 20 km basaltic body, with considerable lateral extent, at the foot of the continental slope, emplaced at the end of continental rifting. \

  7. Fear the serpent: A psychometric study of snake phobia.

    PubMed

    Polák, Jakub; Sedláčková, Kristýna; Nácar, David; Landová, Eva; Frynta, Daniel

    2016-08-30

    Millions of people worldwide suffer from specific phobias. Almost any stimulus may trigger a phobic reaction, but snakes are among the most feared objects. Half of the population feel anxious about snakes and 2-3% meet the diagnostic criteria for snake phobia. Despite such a high ratio, only one instrument is commonly used, the Snake Questionnaire (SNAQ). The aim of this study was to develop a standardized Czech translation, describe its psychometric properties and analyze the distribution of snake fears. In a counter-balanced design 755 respondents were asked to complete the English and Czech SNAQ (first or last) with a 2-3 month delay; 300 of them completed both instruments. We found excellent test-retest reliability (0.94), although the total scores differed significantly when the English version was administered first. The mean score was 5.80 and Generalized Linear Models revealed significant effects of sex and field of study (women and people with no biology education scored higher than men and biologists). A cut-off point for snake phobia as derived from a previous study identified 2.6% of the subjects as phobic. Finally, the score distribution was similar to other countries supporting the view that fear of snakes is universal. PMID:27280527

  8. Chemosensory age discrimination in the snake Boa constrictor (Serpentes: Boidae).

    PubMed

    Gabirot, Marianne; Picerno, Pablo; Valencia, Jorge; Lopez, Pilar; Martin, José

    2012-12-01

    Many snakes are able to use their chemosensory system to detect scent of conspecifics, which is important in many social contexts. Age discrimination based on chemical cues may be especially important to ensure access to sexually mature potential partners. In this study, we used 24 individual Boa constrictor snakes (12 adults mature and 12 non-mature individuals) that had been captured in different areas of Ecuador, and were maintained in captivity at the Vivarium of Quito. We used tongue-flick experiments to examine whether these snakes were able to discriminate between scents from mature and non-mature individuals. Results showed that B. constrictor snakes used chemical cues to recognize conspecifics and that the scent of individuals of different ages elicited chemosensory responses of different magnitudes. The scents from adult conspecifics elicited the quickest and highest chemosensory responses (i.e., short latency times and high tongue-flick rates), although we did not find differential responses to scent of males and females. The magnitude of the responses was lower to scent of sub adult individuals, and then even lower to scent of juvenile snakes, but in all cases the scent of snakes was discriminated from a blank control. We discuss the potential chemical mechanisms that may allow age recognition and its implications for social and sexual behavior of this snake species. PMID:23342514

  9. The complete mitochondrial genome of Elaphe bimaculata (Reptilia, Serpentes, Colubridae).

    PubMed

    Yan, Long; Geng, Zhang-Zhen; Yan, Peng; Wu, Xiao-Bing

    2016-01-01

    The Chinese leopard snake (Elaphe bimaculata) is an endemic species to China. The complete nucleotide sequence of the mitochondrial (mt) genome of E. bimaculata is determined in this study. The circle genome was 17,183 bp in length and consisted of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 2 duplicate control regions. Several peculiar features were observed in mitogenome of E. bimaculata, such as the translocation of tRNA(Leu(UUR)) gene and an incomplete copy for tRNA(Pro). PMID:25090378

  10. Seasonal variation of Hepatozoon spp. (Apicomplexa, Hepatozoidae) parasitemia from Boa constrictor amarali (Serpentes, Boidae) and Hydrodynastes gigas (Serpentes, Colubridae).

    PubMed

    de Vieira Santos, Mariana Morena; O'Dwyer, Lucia Helena; da Silva, Reinaldo José

    2005-09-01

    The aim of this study was to evaluate the parasitemia variation of three Hepatozoon species in Brazilian snakes. This study was conducted between 2001 and 2003 and included Hepatozoon terzii from Boa constrictor amarali, and Hepatozoon migonei and Hepatozoon cyclagrasi from Hydrodynastes gigas. It was observed that the parasitemia tended to decrease in all three Hepatozoon species but the parasites were not eliminated. This data suggest that Hepatozoon infection may be similar to Toxoplasma gondii infection, in that it persists throughout host life. PMID:15999279

  11. The influence of body condition on 17-beta estradiol levels in relation to vitellogenesis in female Vipera aspis (Reptilia, Viperidae).

    PubMed

    Bonnet, X; Naulleau, G; Mauget, R

    1994-03-01

    Seventy-six wild Vipera aspis females were caught over 3 years and placed in outdoor enclosures; 39 reproduced and 37 did not. Almost all the reproductive females had a body condition index (BCI) greater than 0.70 when vitellogenesis began. Monthly blood samples were taken by cardiac puncture. The main plasma parameters of vitellogenesis were measured by spectrophotometry: total plasma calcium, phosphorus, phospholipids, cholesterol, triglycerides, proteins, and albumin. Plasma 17-beta estradiol levels were determined by RIA. Vitellogenesis started soon after hibernation in reproductive females with very high 17-beta estradiol concentrations (average of 4.00 ng/ml) and there was a marked mobilization of maternal reserves (fat bodies, liver, and vertebral bone) associated with very high values of plasma calcium, phosphorus, phospholipids, cholesterol, triglycerides, and proteins. The kinetics of the main plasma components were described throughout the vitellogenesis period (from March to early June), when all plasma parameters differed markedly between reproductive and nonreproductive females. After ovulation, the differences between the two groups of females disappeared except in the case of albumin, which remained at a very low level in reproductive females for 6 months. All nonreproductive females had low 17-beta estradiol plasma levels during vitellogenesis (average of 0.08 ng/ml) and there was no suggestion of mobilization of maternal reserves. After vitellogenesis plasma concentrations of estradiol were low in reproductive (an average of 0.08 ng/ml) and in nonreproductive animals (0.06 ng/ml). Five nonreproductive females kept in the laboratory were estrogenized by 17-beta estradiol silastic implants. The 17-beta estradiol concentrations were close to those measured in reproductive females during vitellogenesis. Maternal reserves were mobilized, with almost all metabolic parameters exhibiting the vitellogenic pattern. When the silastic implants were removed, 17-beta estradiol concentrations dropped sharply to a basal level, but the other components were maintained near the vitellogenic values for several months. In contrast to previous studies on viviparous snakes, these results suggest that in V. aspis 17-beta estradiol levels are linked strictly to vitellogenesis. PMID:8194742

  12. Edema induced by Bothrops asper (Squamata: Viperidae) snake venom and its inhibition by Costa Rican plant extracts.

    PubMed

    Badilla, Beatriz; Chaves, Fernando; Mora, Gerardo; Poveda, Luis J

    2006-06-01

    We tested the capacity of leaf (Urera baccifera, Loasa speciosa, Urtica leptuphylla, Chaptalia nutans, and Satureja viminea) and root (Uncaria tomentosa) extracts to inhibit edema induced by Bothrops asper snake venom. Edema-forming activity was studied plethysmographically in the rat hind paw model. Groups of rats were injected intraperitoneally with various doses of each extract and, one hour later, venom was injected subcutaneously in the right hind paw. Edema was assessed at various time intervals. The edematogenic activity was inhibited in those animals that received an injection U. tomentosa, C. nutans or L. speciosa extract. The extract of U. baccifera showed a slight inhibition of the venom effect. Extract from S. viminea and, to a lesser extent that of U. leptuphylla, induced a pro-inflammatory effect, increasing the edema at doses of 250 mg/kg at one and two hours. PMID:18494294

  13. First record of Porocephalus cf. clavatus (Pentastomida: Porocephalida) as a parasite on Bothrops asper (Squamata: Viperidae) in Costa Rica.

    PubMed

    Alvarado, G; Sánchez-Monge, A

    2015-11-01

    Pentastomids are parasites that infect respiratory cavities of vertebrates, they are pretty common but poorly known in wildlife veterinary. A Bothrops asper snake (Garman, 1884) was captured in the Caribbean region of Costa Rica and had its lung infested with pentastomids, identified as ca Porocephalus clavatus (Wyman, 1845). This represents the first record of Porocephalus (Humboldt, 1812) on B. asper as well as P. cf. clavatus in Costa Rica. Further studies are needed to clarify their taxonomic position, images and scanning electron microscopy photographs (SEM) of the specimens are given. PMID:26628232

  14. Molecular evolution of Bov-B LINEs in vertebrates.

    PubMed

    Kordis, D; Gubensek, F

    1999-09-30

    Since their discovery in family Bovidae (bovids), Bov-B LINEs, believed to be order-specific SINEs, have been found in all ruminants and recently also in Viperidae snakes. The distribution and the evolutionary relationships of Bov-B LINEs provide an indication of their origin and evolutionary dynamics in different species. The evolutionary origin of Bov-B LINE elements has been shown unequivocally to be in Squamata (squamates). The horizontal transfer of Bov-B LINE elements in vertebrates has been confirmed by their discontinuous phylogenetic distribution in Squamata (Serpentes and two lizard infra-orders) as well as in Ruminantia, by the high level of nucleotide identity, and by their phylogenetic relationships. The direction of horizontal transfer from Squamata to the ancestor of Ruminantia is evident from the genetic distances and discontinuous phylogenetic distribution of Bov-B LINE elements. The ancestor of Colubroidea snakes has been recognized as a possible donor of Bov-B LINE elements to Ruminantia. The timing of horizontal transfer has been estimated from the distribution of Bov-B LINE elements in Ruminantia and the fossil data of Ruminantia to be 40-50 My ago. The phylogenetic relationships of Bov-B LINE elements from the various Squamata species agrees with that of the species phylogeny, suggesting that Bov-B LINE elements have been stably maintained by vertical transmission since the origin of Squamata in the Mesozoic era. PMID:10570995

  15. Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes.

    PubMed

    Kordis, D; Gubensek, F

    1998-09-01

    We have shown previously by Southern blot analysis that Bov-B long interspersed nuclear elements (LINEs) are present in different Viperidae snake species. To address the question as to whether Bov-B LINEs really have been transmitted horizontally between vertebrate classes, the analysis has been extended to a larger number of vertebrate, invertebrate, and plant species. In this paper, the evolutionary origin of Bov-B LINEs is shown unequivocally to be in Squamata. The previously proposed horizontal transfer of Bov-B LINEs in vertebrates has been confirmed by their discontinuous phylogenetic distribution in Squamata (Serpentes and two lizard infra-orders) as well as in Ruminantia, by the high level of nucleotide identity, and by their phylogenetic relationships. The horizontal transfer of Bov-B LINEs from Squamata to the ancestor of Ruminantia is evident from the genetic distances and discontinuous phylogenetic distribution. The ancestor of Colubroidea snakes is a possible donor of Bov-B LINEs to Ruminantia. The timing of horizontal transfer has been estimated from the distribution of Bov-B LINEs in Ruminantia and the fossil data of Ruminantia to be 40-50 My ago. The phylogenetic relationships of Bov-B LINEs from the various Squamata species agrees with that of the species phylogeny, suggesting that Bov-B LINEs have been maintained stably by vertical transmission since the origin of Squamata in the Mesozoic era. PMID:9724768

  16. Horizontal transfer of non-LTR retrotransposons in vertebrates.

    PubMed

    Kordis, D; Gubensek, F

    1999-01-01

    Since their discovery in family Bovidae (bovids), Bov-B LINEs, believed to be order-specific SINEs, have been found in all ruminants and recently also in Viperidae snakes. The distribution and the evolutionary relationships of Bov-B LINEs provide an indication of their origin and evolutionary dynamics in different species. The evolutionary origin of Bov-B LINE elements has been shown unequivocally to be in Squamata (squamates). The horizontal transfer of Bov-B LINE elements in vertebrates has been confirmed by their discontinuous phylogenetic distribution in Squamata (Serpentes and two lizard infra-orders) as well as in Ruminantia, by the high level of nucleotide identity, and by their phylogenetic relationships. The direction of horizontal transfer from Squamata to the ancestor of Ruminantia is evident from the genetic distances and discontinuous phylogenetic distribution of Bov-B LINE elements. The ancestral snake lineage (Boidae) has been recognized as a possible donor of Bov-B LINE elements to Ruminantia. The timing of horizontal transfer has been estimated from the distribution of Bov-B LINE elements in Ruminantia and the fossil data of Ruminantia to be 40-50 mya. The phylogenetic relationships of Bov-B LINE elements from the various Squamata species agrees with that of the species phylogeny, suggesting that Bov-B LINE elements have been stably maintained by vertical transmission since the origin of Squamata in the Mesozoic era. PMID:10952205

  17. A new species of death adder (Acanthophis: Serpentes: Elapidae) from north-western Australia.

    PubMed

    Maddock, Simon T; Ellis, Ryan J; Doughty, Paul; Smith, Lawrence A; Wüster, Wolfgang

    2015-01-01

    Australian death adders (genus Acanthophis) are highly venomous snakes with conservative morphology and sit-and-wait predatory habits, with only moderate taxonomic diversity that nevertheless remains incompletely understood. Analyses of mitochondrial and nuclear gene sequences and morphological characteristics of death adders in northern Australia reveal the existence of a new species from the Kimberley region of Western Australia and the Northern Territory, which we describe as Acanthophis cryptamydros sp. nov. Although populations from the Kimberley were previously considered conspecific with Northern Territory death adders of the A. rugosus complex, our mtDNA analysis indicates that its closest relatives are desert death adders, A. pyrrhus. We found that A. cryptamydros sp. nov. is distinct in both mtDNA and nDNA analysis, and possesses multiple morphological characteristics that allow it to be distinguished from all other Acanthophis species. This study further supports the Kimberley region as an area with high endemic biodiversity. PMID:26623813

  18. Taxonomic status and morphological variation of Hydrodynastes bicinctus (Hermann, 1804) (Serpentes: Dipsadidae).

    PubMed

    Murta-Fonseca, Roberta A; Franco, Francisco L; Fernandes, Daniel Silva

    2015-01-01

    Hydrodynastes bicinctus was described with no type material or locality and it has two subspecies currently recognized that are not taxonomically well defined. We tested the validity of the two subspecies through meristic, morphometric, and color pattern characters. Two apparently distinct color patterns of H. bicinctus were noticed, one from the Cerrado open formations and the other from the Amazon rainforest. These aforementioned patterns, however, exhibited a high degree of geographic overlap and many specimens showed a blended pattern. Based on these results we propose synonymizing H. bicinctus schultzi with the nominal taxon. Furthermore, we designate a neotype for the species, present data on geographic distribution, and provide morphological descriptions of the hemipenis, cephalic glands, and skull. PMID:26623921

  19. Serpents in the Garden: English Professors in Contemporary Film and Television

    ERIC Educational Resources Information Center

    Carens, Timothy L.

    2010-01-01

    In an article on "Smart People" (2008), a film in which Dennis Quaid plays an English professor who becomes romantically involved with a former student, Jeffery J. Williams notes that a "common complaint among academics is that films don't depict them correctly, and in some ways Quaid was accoutered by central casting, beginning the movie in a…

  20. Monsters of the sea serpent: parasites of an oarfish, Regalecus russellii.

    PubMed

    Kuris, Armand M; Jaramillo, Alejandra G; McLaughlin, John P; Weinstein, Sara B; Garcia-Vedrenne, Ana E; Poinar, George O; Pickering, Maria; Steinauer, Michelle L; Espinoza, Magaly; Ashford, Jacob E; Dunn, Gabriela L P

    2015-02-01

    Examination of a small portion of the viscera of an oarfish ( Regalecus russellii ) recovered from Santa Catalina Island, southern California, revealed numerous tetraphyllidean tapeworm plerocercoids, Clistobothrium cf. montaukensis; 2 juvenile nematodes, Contracaecum sp.; and a fragment of an adult acanthocephalan, family Arhythmacanthidae. This suggests that the fish was relatively heavily parasitized. The presence of larval and juvenile worms suggests that oarfish are preyed upon by deep-swimming predators such as the shortfin mako shark, Isurus oxyrinchus , known to be a definitive host for the adult tapeworm, and also by diving mammals such as sperm whales, Physeter catodon L., hosts of Contracaecum spp. nematodes. PMID:25220829

  1. The Serpent in the Garden State: Juvenile Delinquency in 1920s New Jersey

    ERIC Educational Resources Information Center

    Ferry, Thomas M.

    2010-01-01

    School administrators, educators, psychologists, social workers, the juvenile courts, institutional reformers, and others shape the manner in which children are labeled, portrayed, and treated. However, the agendas, motivations, political language, and influence of these "helping professionals" in "treating" and "reforming" juvenile delinquents…

  2. Unique features of myogenesis in Egyptian cobra (Naja haje) (Squamata: Serpentes: Elapidae).

    PubMed

    Khannoon, Eraqi R; Rupik, Weronika; Lewandowski, Damian; Dubińska-Magiera, Magda; Swadźba, Elwira; Daczewska, Małgorzata

    2016-03-01

    During early stages of myotomal myogenesis, the myotome of Egyptian cobra (Naja haje) is composed of homogenous populations of mononucleated primary myotubes. At later developmental phase, primary myotubes are accompanied by closely adhering mononucleated cells. Based on localization and morphology, we assume that mononucleated cells share features with satellite cells involved in muscle growth. An indirect morphological evidence of the fusion of mononucleated cells with myotubes is the presence of numerous vesicles in the subsarcolemmal region of myotubes adjacent to mononucleated cell. As differentiation proceeded, secondary muscle fibres appeared with considerably smaller diameter as compared to primary muscle fibre. Studies on N. haje myotomal myogenesis revealed some unique features of muscle differentiation. TEM analysis showed in the N. haje myotomes two classes of muscle fibres. The first class was characterized by typical for fast muscle fibres regular distribution of myofibrils which fill the whole volume of muscle fibre sarcoplasm. White muscle fibres in studied species were a prominent group of muscles in the myotome. The second class showed tightly paced myofibrils surrounding the centrally located nucleus accompanied by numerous vesicles of different diameter. The sarcoplasm of these cells was characterized by numerous lipid droplets. Based on morphological features, we believe that muscle capable of lipid storage belong to slow muscle fibres and the presence of lipid droplets in the sarcoplasm of these muscles during myogenesis might be a crucial adaptive mechanisms for subsequent hibernation in adults. This phenomenon was, for the first time, described in studies on N. haje myogenesis. PMID:26025263

  3. Valid or not? Yunnan mountain snake Plagiopholis unipostocularis (Serpentes: Colubridae: Pseudoxenodontinae).

    PubMed

    Zhong, Guang Hui; Chen, Wen De; Liu, Qin; Zhu, Fei; Peng, Pei Hao; Guo, Peng

    2015-01-01

    Plagiopholis unipostocularis Zhao, Jiang & Huang, 1978 is a small snake endemic to Yunnan, southern China. Its validity is still controversial and unresolved. Based on extensive sampling in Yunnan, we conducted morphological comparison and molecular phylogenetics on the unidentified specimens of Plagiopholis from Yunnan. Based on a combination of morphological comparison and molecular phylogeny, the newly collected specimens could be identified as P. blakewayi. While some specimens exhibit one or more diagnostics of P. unipostocularis, and some characteristics are intermediate between that of Plagiopholis unipostocularis and P. blakewayi. Thus morphological continuities between two species uncovered P. unipostocularis is a synonymy of P. blakewayi, and the diagnostics of this species was revised accordingly. PMID:26624106

  4. The Development of the Skull of the Egyptian Cobra Naja h. haje (Squamata: Serpentes: Elapidae)

    PubMed Central

    Khannoon, Eraqi R.; Evans, Susan E.

    2015-01-01

    Background The study of craniofacial development is important in understanding the ontogenetic processes behind morphological diversity. A complete morphological description of the embryonic skull development of the Egyptian cobra, Naja h. haje, is lacking and there has been little comparative discussion of skull development either among elapid snakes or between them and other snakes. Methodology/Principal Findings We present a description of skull development through a full sequence of developmental stages of the Egyptian cobra, and compare it to other snakes. Associated soft tissues of the head are noted where relevant. The first visible ossification centres are in the supratemporal, prearticular and surangular, with slight ossification visible in parts of the maxilla, prefrontal, and dentary. Epiotic centres of ossification are present in the supraoccipital, and the body of the supraoccipital forms from the tectum posterior not the tectum synoticum. The venom glands are visible as distinct bodies as early at stage 5 and enlarge later to extend from the otic capsule to the maxilla level with the anterior margin of the eye. The gland becomes more prominent shortly before hatching, concomitant with the development of the fangs. The tongue shows incipient forking at stage 5, and becomes fully bifid at stage 6. Conclusions/Significance We present the first detailed staging series of cranial development for the Egyptian cobra, Naja h. haje. This is one of the first studies since the classical works of G. de Beer and W. Parker that provides a detailed description of cranial development in an advanced snake species. It allows us to correct errors and misinterpretations in previous accounts which were based on a small sample of specimens of uncertain age. Our results highlight potentially significant variation in supraoccipital formation among squamates and the need for further research in this area. PMID:25860015

  5. Taxonomic revision of Chironius flavolineatus (Jan, 1863) with description of a new species (Serpentes: Colubridae).

    PubMed

    Hamdan, Breno; Fernandes, Daniel S

    2015-01-01

    We conducted a taxonomic review of Chironius flavolineatus on the basis of continuous and discrete morphological characters. We recognize a new species which is distinguished from all currently recognized congeners by the following unique combination of characters: first third of body black or dark gray; vertebral stripe yellowish or creamish white distinct from dorsals of nape and extending throughout almost whole body length; head dorsum tan to brown, distinct from background color of first third of body; posterior temporal scales ranging one to four; cloacal shield frequently divided; two to four rows of keeled dorsal scales at midbody; venter ground color gradually darkening towards cloaca; region of medial constriction of hemipenis slightly covered with spinules separating calyces of apex from spines below region of constriction; in lateral view, sulcus spermaticus positioned on convex face of hemipenis; ascending process of premaxilla oblique anteroposteriorly to longitudinal axis of skull; optic fenestrae not exceeding frontoparietal suture; posterior border of supratemporal exceeding braincase; dorsoventral axis of quadrate oblique mesolaterally, moving away from longitudinal axis of skull. Furthermore, we provide data on morphological variation, distribution, and an emended diagnosis for C. flavolineatus. PMID:26623847

  6. Post-ovipositional development of the monocled cobra, Naja kaouthia (Serpentes: Elapidae).

    PubMed

    Jackson, Kate

    2002-01-01

    External morphological development between oviposition and hatching of the monocled cobra, Naja kaouthia, is described. Ten developmental stages are diagnosed according to nine features. These include fusion of the body wall musculature along the ventral midline, appearance of the endolymphatic ducts, formation of the eyelid, and the appearance of scales on the head and body. Additional observations of the developing skull are made at four of these ten stages, based on cleared and stained heads. PMID:16351869

  7. Two new endemic species of Epictia Gray, 1845 (Serpentes: Leptotyphlopidae) from Northern Peru.

    PubMed

    Koch, Claudia; Cruz, Roy Santa; Cárdenas, Heidy

    2016-01-01

    Herein, we describe two new thread snake species of the genus Epictia from elevations higher than 2000 meters above sea level in the Andes of the Cajamarca Region in Northern Peru. Both species share 10 midtail scale rows, a broad contact between the anterior supralabial and the supraocular scales in most of the specimens, and a yellow spot on the snout and the terminal part of the tail. Epictia venegasi sp. nov. is described on the basis of nine specimens and can further be differentiated from its congeners by having 211-221 mid-dorsal scale rows and a color pattern where each body scale is black on the anterior half and yellow on the posterior half. The description of Epictia vonmayi sp. nov. is based on two specimens which can further be differentiated from their congeners by having 196-205 mid-dorsal scale rows and 14 distinct black longitudinal stripes around the body, which run through the center of each scale and are separated by bright yellow interspaces; accordingly the tail exhibits 10 black longitudinal stripes which likewise run through the center of each scale. PMID:27515649

  8. Delivery of Duvernoy's secretion into prey by the brown tree snake, Boiga irregularis (Serpentes:Colubridae).

    PubMed

    Hayes, W K; Lavín-Murcio, P; Kardong, K V

    1993-07-01

    Many colubrid snakes, like the more venomous elapid and viperid snakes, can produce and inject an oral secretion that is toxic and may present a human health risk. However, colubrid oral toxins are produced in a Duvernoy's gland and delivered not through a hollow fang, but instead by long, often grooved teeth under low pressure. The possible role of Duvernoy's secretion in functions other than rapid killing of prey make it important to know how and where this secretion is delivered during a feeding strike. We used ELISA analysis to determine the quantity and proportional distribution of Duvernoy's secretion delivered into the integument compared to the viscera during a feeding strike by the colubrid snake Boiga irregularis. We determined that only about 54% (1-5 mg) of the secretion actually reached the viscera and that the rest remained in the integument. The amount reaching the viscera is about three to eight times the i.p. LD50 for mice, but these snakes depend more on constriction than toxins to kill their prey. Consequently, delivery of Duvernoy's secretion by B. irregularis is hypothesized to be part of a digestive function and its toxic properties a byproduct of this role. PMID:8212032

  9. Leptophis santamartensis (Serpentes, Colubridae), a junior synonym of Leptophis ahaetulla occidentalis

    USGS Publications Warehouse

    Albuquerque, Nelson R.; de Passos, Paulo; Gotte, Steve W.

    2012-01-01

    Leptophis santamartensis, known only from Sierra Nevada de Santa Marta, Colombia, is one of the more poorly known species of the genus Leptophis. The characters used for its diagnosis largely overlap with those of other Leptophis, mainly with Leptophis ahaetulla occidentalis, the only other Leptophis known to occur in the Sierra Nevada de Santa Marta. A detailed comparison of L. a. occidentalis with the two known specimens of L. santamartensis leads to the conclusion that the latter should be relegated to the synonymy of the former.

  10. Recharacterization of Rhinophis dorsimaculatus Deraniyagala, 1941 (Serpentes: Uropeltidae), including description of new material.

    PubMed

    Gower, David J; Wickramasinghe, L J Mendis

    2016-01-01

    The Sri Lankan uropeltid (shieldtail) snake Rhinophis dorsimaculatus Deraniyagala, 1941 was described originally from two specimens that were subsequently lost. The small amount of previously published data and lack of published colour photographs made this one of South Asia's most poorly known snake species, and this resulted in at least one instance of taxonomic misidentification. An additional 10 specimens from a historical collection from the vicinity of the type locality recently came to light. This material is reviewed and documented and the species recharacterized. An additional locality for the species is reported. The newly reported material helps to corroborate the taxonomic validity and distinctiveness of Rhinophis dorsimaculatus. The species is readily distinguished from congeners by having 227 or more ventral scales; a large, dorsally carinate rostral shield; posterior margins of paired anals that are largely separated by the posteriormost ventral scale; and a distinctive colour pattern with bilaterally asymmetrical dark blotches within a broad, pale middorsal stripe and regularly punctate flanks. PMID:27615880

  11. Ultrastructure and wear patterns of the ventral epidermis of four snake species (Squamata, Serpentes).

    PubMed

    Klein, Marie-Christin G; Gorb, Stanislav N

    2014-10-01

    Snakes are limbless tetrapods highly specialized for sliding locomotion. This locomotion leads to the skin being exposed to friction loads, especially on the ventral body side, which leads to wear. It is presumed that snakes therefore have specific optimizations for minimizing abrasion. Scales from snakes with habitat, locomotor and/or behavior specializations have specific gradients in material properties that may be due to different epidermal architecture. To approach this issue we examined the skin of Lampropeltis getula californiae (terrestrial), Epicrates cenchria cenchria (generalist), Morelia viridis (arboreal), and Gongylophis colubrinus (burrowing) with a focus on (i) the ultrastructure of the ventral epidermis and (ii) the qualitative abrasion pattern of the ventral scales. Scanning and transmission electron microscopy revealed variations in the structure, thickness, layering, and material composition of the epidermis between the species. Furthermore, SEM and white light interferometer images of the scale surface showed that the abrasion patterns differed, even when the snakes were reared on the same substrate. These data support the idea that (i) a specific gradient in material properties may be due to a variation in epidermis architecture (thickness/ultrastructure) and (ii) this variation may be an optimization of material properties for specific ways of life. PMID:25169958

  12. Scratch resistance of the ventral skin surface in four snake species (Squamata, Serpentes).

    PubMed

    Klein, Marie-Christin G; Gorb, Stanislav N

    2016-04-01

    Snakes are limbless tetrapods highly specialized for sliding locomotion on various substrates. Their skin is constantly exposed to high friction forces, which promotes abrasion. Snake skin has material and surface specializations, presumably optimized for friction and abrasion resistance. We found that different snake species living in different habitats have different abrasion patterns and hypothesized that this correlates with specific epidermal architecture and surface topography. To test this hypothesis artificial scratches, under controlled load conditions, were created on the ventral skin material (epidermis) of four snake species adapted to different habitats: Lampropeltis getula californiae (stony and sandy soil substrates), Epicrates cenchria cenchria (trees, soil and water), Morelia viridis (trees), and Gongylophis colubrinus (burrowing in sand). Abrasion appearance on the skin surface was examined using scanning electron microscopy and white light interferometry. The material failure was different between the species, which we attribute to differences in the epidermis' response to the same abrasive challenge. We also discuss abrasion resistance mechanisms and the correlation with the different ultrastructure and surface microstructure. PMID:26874374

  13. Shedding light on serpent sight: the visual pigments of henophidian snakes.

    PubMed

    Davies, Wayne L; Cowing, Jill A; Bowmaker, James K; Carvalho, Livia S; Gower, David J; Hunt, David M

    2009-06-10

    The biologist Gordon Walls proposed his "transmutation" theory through the 1930s and the 1940s to explain cone-like morphology of rods (and vice versa) in the duplex retinas of modern-day reptiles, with snakes regarded as the epitome of his hypothesis. Despite Walls' interest, the visual system of reptiles, and in particular snakes, has been widely neglected in favor of studies of fishes and mammals. By analyzing the visual pigments of two henophidian snakes, Xenopeltis unicolor and Python regius, we show that both species express two cone opsins, an ultraviolet-sensitive short-wavelength-sensitive 1 (SWS1) (lambda(max) = 361 nm) pigment and a long-wavelength-sensitive (LWS) (lambda(max) = 550 nm) pigment, providing the potential for dichromatic color vision. They also possess rod photoreceptors which express the usual rod opsin (Rh1) pigment with a lambda(max) at 497 nm. This is the first molecular study of the visual pigments expressed in the photoreceptors of any snake species. The presence of a duplex retina and the characterization of LWS, SWS1, and Rh1 visual pigments in henophidian snakes implies that "lower" snakes do not provide support for Walls' transmutation theory, unlike some "higher" (caenophidian) snakes and other reptiles, such as geckos. More data from other snake lineages will be required to test this hypothesis further. PMID:19515920

  14. Envenomation by neotropical opisthoglyphous colubrid Thamnodynastes cf. pallidus Linne, 1758 (Serpentes:Colubridae) in Venezuela.

    PubMed

    Diaz, Fresnel; Navarrete, Luis F; Pefaur, Jaime; Rodriguez-Acosta, Alexis

    2004-01-01

    This is a case report of a "non-venomous" snake bite in a herpetologist observed at the Sciences Faculty of the Universidad de los Andes (Mérida, Venezuela). The patient was bitten on the middle finger of the left hand, and shows signs of pronounced local manifestations of envenomation such as bleeding from the tooth imprint, swelling and warmth. He was treated with local care, analgesics, and steroids. He was dismissed from the hospital and observed at home during five days with marked improvement of envenomation. The snake was brought to the medical consult and identified as a Thamnodynastes cf. pallidus specimen. This report represents the first T. pallidus accident described in a human. PMID:15517037

  15. Reproductive biology of Thamnodynastes hypoconia (Serpentes: Dipsadidae) in Brazilian subtemperate wetlands.

    PubMed

    Rebelato, Marluci M; Pontes, Gláucia M F; Tozetti, Alexandro M

    2016-07-11

    This study aimed to describe the reproductive biology of populations of Thamnodynastes hypoconia in subtemperate wetlands based on macroscopic analyses of their gonads. We analyzed 101 specimens from the southernmost regions of Brazil. The males had a greater snout-vent length, but the females reached sexual maturity with a greater body size. The reproductive cycle of the females was seasonal, with secondary vitellogenesis occurring between the winter and spring (May-October). Based on macroscopic analysis of gonads, data suggests that males have a continuous reproductive cycle. Parturition occurs between the late summer and early fall (January-April). The clutch size ranged between 4 and 16 embryos and showed no relationship with the female's body size. The recorded reproductive frequency of T. hypoconia is low (38 %) compared to other phylogenetically related species. Conversely, the studied populations appear to have a high reproductive success because it is an abundant species in the study site. PMID:27411065

  16. Phylogenetic position, origin and biogeography of Palearctic and Socotran blind-snakes (Serpentes: Typhlopidae).

    PubMed

    Kornilios, P; Giokas, S; Lymberakis, P; Sindaco, R

    2013-07-01

    The majority of the family Typhlopidae occurs in the Neotropic, Australasian, Indo-Malayan and Afrotropic ecoregions. They show a restricted distribution in the western Palearctic, where they include few native species, i.e. Rhinotyphlops simoni, R. episcopus and Typhlops vermicularis. A unique species among typhlopids is T. socotranus, found in Socotra, one of the most endemic-rich archipelagoes. In this study we determine the phylogenetic position of the above mentioned species and discuss their systematics, origin and biogeography. For this purpose we use three protein-coding nuclear markers (AMEL-amelogenin, BDNF-brain-derived neurotrophic factor and NT3-neurotrophin 3) to construct a time-calibrated phylogeny of the family Typhlopidae. Our results show that T. socotranus is a sister-species to T. vermicularis, while R. simoni and R. episcopus are sister-species to each other and are found within the African clade of the family, although they are geographically distributed in west Asia. Additionally we discuss several hypotheses on their origin, as well as the occurence of typhlopids in Eurasia. PMID:23523862

  17. Cases of human envenoming caused by Philodryas olfersii and Philodryas patagoniensis (Serpentes: Colubridae).

    PubMed

    de Araújo, M E; dos Santos, A C

    1997-01-01

    The present paper reports two cases of human envenoming by colubrid snakes of Philodryas, considered as not poisonous, showing evidence of the clinical aspects and the evolution of the symptoms of envenoming. The similarity of these cases with those caused by Bothrops suggests a more careful evaluation on the victims considering the medical treatment to be adopted. PMID:9428185

  18. [The salivary glands of Philodryas patagoniensis Girard, 1857 (Serpentes, Colubridae). A morphological, morphometric and histological study].

    PubMed

    Lopes, R A; Contrera, M G; da Costa, J R; Petenusci, S O; Lima-Verde, J S

    1982-01-01

    Morphological, morphometrical and histochemical studies of the cell types in the salivary glands of Philodryas patagoniensis have been performed. It is concluded: 1) the acini of supra, infralabial and premaxillary glands are formed by mucous and mucoserous cells; the Duvernoy's gland by seromucous cells; 2) mucous cells show neutral and sulphated mucosubstances and sialic acid; mucoserous cells show neutral mucosubstance, sialic acid and protein radicals; seromucous cells of Duvernoy's gland show neutral mucosubstance and protein radicals. The acinar area, height of tubule and duct cells, and nuclear volume of acinar, tubule and duct cells were evaluated morphometrically. PMID:7181506

  19. Preliminary Results From the Serpentinite, Extension and Regional Porosity Experiment Across the Nicaraguan Trench (SERPENT)

    NASA Astrophysics Data System (ADS)

    Key, K. W.; Constable, S.; Evans, R. L.; Naif, S.; Matsuno, T.; Lizarralde, D.

    2010-12-01

    Water plays an important role in the volcanic processes occurring at convergent margins, as the release of water from the downgoing slab affects the rheology of the mantle, increases melting by lowering the solidus temperature, and alters the chemistry of arc-lavas. Yet, one of the major uncertainties in terms of fluid inputs into the subduction factory concerns the extent of serpentinization of the oceanic upper mantle and the volumes of water that are being carried into the subduction system through this route. In April 2010 we conducted a large-scale marine electromagnetic experiment along a 300 km profile offshore Nicaragua in a region that shows evidence for substantial fault related fluid circulation in the crust and possibly upper mantle, and high Ba/La ratios and water contents in adjacent onshore volcanics that suggest a strong slab fluid input into the arc-melting. Our project is the largest combined controlled-source electromagnetic (CSEM) and magnetotelluric (MT) data set ever collected on an active subduction zone. During the single 28 day research cruise aboard the R/V Melville we collected 54 stations of broadband marine magnetotelluric (MT) data and deep-towed nearly 800 km of controlled-source electromagnetic (CSEM) data. Robust multiple-station array processing of the MT data yields high quality MT responses from 10 to 20,000 s period. The MT responses are fairly 1D over the abyssal plain, showing the effects of a thin veneer of conductive sediments overlying a resistive lithosphere and a deeper conductive mantle. The responses become strongly 2D on the trench outer rise and exhibit large 3D distortions at the bottom of the trench, likely due to a combination of effects from severe topography and seafloor conductivity variations. Two circular CSEM tows of 30 km radius were measured by special long-wire EM (LEM) sensors on the abyssal plain and the outer rise. The LEM data reveals a distinct pattern of electromagnetic polarization that is characteristic of mantle transverse anisotropy. Since the conductive axis is aligned with the fossil ridge-parallel direction and reactivated normal faults in the trench, we interpret this to be caused by conductive serpentinized mantle penetrating faults. Conventional CSEM data recorded at a broad suite of transmission frequencies along the 300 km long profile and a 50 km along strike profile provide constraints on crustal conductivity variations. The analysis of these data is ongoing and will provide a comprehensive picture of the electrical conductivity structure from the seafloor to the upper mantle, representing the entire input into this part of the Central American subduction system. Since conductivity is highly dependent on thermal structure, crack porosity and the presence of serpentinite, our experiment will provide constraints on the depth of active fluid circulation within the oceanic crust and mantle, the variation of fluid circulation with distance from the trench and hence with the degree of plate bending, and the extent of dewatering of the subducting slab in the shallow portion of the mantle wedge.

  20. Sir Charles James Martin MB FRS: Australian serpents and Indian plague, one-hundred years ago.

    PubMed

    Hawgood, B J

    1997-07-01

    In 1891 as Demonstrator in Physiology at the University of Sydney, Charles Martin began the first systematic study of the chemical and physiological properties of the venoms of the Australian elapid species, Pseudechis porphyriacus and Notechis scutatus. Two major constituents were detected: a large coagulable protein which was associated with intravascular clotting, and a small proteinaceous molecule, an albumose, associated with neurotoxicity. Martin designed and constructed a high-pressure gelatin membrane ultrafilter for fractionation of venom. His studies indicated that certain physiological actions and clinical symptoms were related to the faster rate of diffusion within the tissue space of a neurotoxic constituent relative to a clotting constituent. Extending this work to toxin-antitoxin relationships, Martin provided evidence that antitoxin was a large molecule with slow diffusibility in tissue and advised the administration of curative serum (including diphtheria antitoxin) by intravenous injection. In 1903, Martin returned to London as Director of the Lister Institute of Preventive Medicine. He was soon involved in the planning of scientific work to be undertaken by the Commission for Investigation of Plague in India as the disease continued to ravage the subcontinent. Detailed epidemiological studies of possible factors involved in the spread of Pasteurella pestis showed, unequivocally, that infected rat fleas were the vector of transmission from rats to humans. PMID:9247999

  1. Sympathetic outflow activates the venom gland of the snake Bothrops jararaca by regulating the activation of transcription factors and the synthesis of venom gland proteins.

    PubMed

    Luna, Milene S A; Hortencio, Thiago M A; Ferreira, Zulma S; Yamanouye, Norma

    2009-05-01

    The venom gland of viperid snakes has a central lumen where the venom produced by secretory cells is stored. When the venom is lost from the gland, the secretory cells are activated and new venom is produced. The production of new venom is triggered by the action of noradrenaline on both alpha(1)- and beta-adrenoceptors in the venom gland. In this study, we show that venom removal leads to the activation of transcription factors NFkappaB and AP-1 in the venom gland. In dispersed secretory cells, noradrenaline activated both NFkappaB and AP-1. Activation of NFkappaB and AP-1 depended on phospholipase C and protein kinase A. Activation of NFkappaB also depended on protein kinase C. Isoprenaline activated both NFkappaB and AP-1, and phenylephrine activated NFkappaB and later AP-1. We also show that the protein composition of the venom gland changes during the venom production cycle. Striking changes occurred 4 and 7 days after venom removal in female and male snakes, respectively. Reserpine blocks this change, and the administration of alpha(1)- and beta-adrenoceptor agonists to reserpine-treated snakes largely restores the protein composition of the venom gland. However, the protein composition of the venom from reserpinized snakes treated with alpha(1)- or beta-adrenoceptor agonists appears normal, judging from SDS-PAGE electrophoresis. A sexual dimorphism in activating transcription factors and activating venom gland was observed. Our data suggest that the release of noradrenaline after biting is necessary to activate the venom gland by regulating the activation of transcription factors and consequently regulating the synthesis of proteins in the venom gland for venom production. PMID:19411547

  2. Evolution of rattlesnakes (Viperidae; Crotalus) in the warm deserts of western North America shaped by Neogene vicariance and Quaternary climate change.

    PubMed

    Douglas, Michael E; Douglas, Marlis R; Schuett, Gordon W; Porras, Louis W

    2006-10-01

    During Pleistocene, the Laurentide ice sheet rearranged and diversified biotic distributions in eastern North America, yet had minimal physical impact in western North America where lineage diversification is instead hypothesized to result from climatic changes. If Pleistocene climatic fluctuations impacted desert species, the latter would reflect patterns of restricted gene flow concomitant with indications of demographic bottlenecks. Accordingly, molecular evidence for refugia should be present within these distributions and for subsequent range expansions as conditions improved. We sought answers to these questions by evaluating mitochondrial DNA (mtDNA) sequences from four species of rattlesnakes [Crotalus mitchellii (speckled rattlesnake), Crotalus cerastes (sidewinder), Crotalus tigris (tiger rattlesnake), Crotalus ruber (red diamond rattlesnake)] with distributions restricted to desert regions of southwestern North America. We inferred relationships using parsimony and maximum likelihood, tested intraspecific clades for population expansions, applied an isolation-with-migration model to determine bi-directional migration rates (m) among regions, and inferred divergence times for species and clades by applying a semiparametric penalized likelihood approach to our molecular data. Evidence for significant range expansion was present in two of eight regions in two species (Crotalus mitchellii pyrrhus, C. tigris region north). Two species (C. cerastes, C. mitchellii) showed a distribution concomitant with northward displacement of Baja California from mainland México, followed by vicariant separation into subclades. Effects of Pleistocene climate fluctuations were found in the distributions of all four species. Three regional diversification patterns were identified: (i) shallow genetic diversity that resulted from Pleistocene climatic events (C. tigris, C. ruber); (ii) deep Pleistocene divisions indicating allopatric segregation of subclades within refugia (C. mitchellii, C. cerastes); and (iii) lineage diversifications that extended to Pliocene or Late Miocene (C. mitchellii, C. cerastes). Clade-diversifying and clade-constraining effects impacted the four species of rattlesnakes unequally. We found relatively high levels of molecular diversification in the two most broadly distributed species (C. mitchellii, C. cerastes), and lower levels of genetic diversification in the two species (C. tigris, C. ruber) whose ranges are relatively more restricted. Furthermore, in several cases, the distributions of subspecies were not congruent with our molecular information. We suggest regional conservation perspectives for southwestern deserts cannot rely upon subspecies as biodiversity surrogates, but must instead employ a molecular and deep historical perspective as a primary mechanism to frame biodiversity reserves within this region. PMID:16968275

  3. A cryptic palm-pitviper species (Squamata: Viperidae: Bothriechis) from the Costa Rican highlands, with notes on the variation within B. nigroviridis.

    PubMed

    Doan, Tiffany M; Mason, Andrew J; Castoe, Todd A; Sasa, Mahmood; Parkinson, Christopher L

    2016-01-01

    Middle America is one of the most biodiverse regions in the world, harboring an exceptional number of rare and endemic species. This is especially true of Middle American cloud forests, where montane specialists occupy restricted, high-elevation ranges making them attractive candidates for investigating historical biogeography and speciation. One such highland-restricted species, the black speckled palm-pitviper (Bothriechis nigroviridis), occupies the Central, Tilarán, and Talamanca Cordilleras in Costa Rica and Panama. In this study, we investigate the genetic and morphological variation among populations of B. nigroviridis by inferring a multilocus phylogeny (21 individuals) and analyzing meristic scale characters with a principal component analysis (64 individuals). We find B. nigroviridis sensu stricto to be composed of two deeply divergent lineages, one with a restricted range in the northern and central Cordillera Talamanca and the other ranging throughout the Central, Tilarán, and Talamanca Cordilleras. Furthermore, these two lineages are morphologically distinct, with previously unrecognized differences in several characters allowing us to name and diagnose a new species B. nubestris sp. nov. We also examine the genetic and morphological variation within B. nigroviridis and discuss biogeographic hypotheses that may have led to the diversification of Bothriechis lineages. PMID:27470764

  4. A relict lineage and new species of green palm-pitviper (Squamata, Viperidae, Bothriechis) from the Chortís Highlands of Mesoamerica

    PubMed Central

    Townsend, Josiah H.; Medina-Flores, Melissa; Wilson, Larry David; Jadin, Robert C.; Austin, James D.

    2013-01-01

    Abstract A new species of palm-pitviper of the genus Bothriechis is described from Refugio de Vida Silvestre Texíguat in northern Honduras. The new species differs from congeners by having 19 dorsal scale rows at midbody, a bright green dorsal coloration in adults, the prelacunal scale fused to the second supralabial, and in representing a northern lineage that is sister to Bothriechis lateralis, which is distributed in Costa Rica and western Panama and is isolated from the new taxon by the Nicaraguan Depression. This represents the 15th endemic species occurring in Refugio de Vida Silvestre Texíguat, one of the richest herpetofaunal sites in Honduras, itself being the country with the highest degree of herpetofaunal endemism in Central America. We name this new species in honor of a Honduran conservationist slain in fighting against illegal logging, highlighting the sacrifices of rural activists in battling these issues and the critical importance of conservation in these areas. PMID:23794885

  5. Comparative study of anticoagulant and procoagulant properties of 28 snake venoms from families Elapidae, Viperidae, and purified Russell's viper venom-factor X activator (RVV-X).

    PubMed

    Suntravat, Montamas; Nuchprayoon, Issarang; Pérez, John C

    2010-09-15

    Snake venoms consist of numerous molecules with diverse biological functions used for capturing prey. Each component of venom has a specific target, and alters the biological function of its target. Once these molecules are identified, characterized, and cloned; they could have medical applications. The activated clotting time (ACT) and clot rate were used for screening procoagulant and anticoagulant properties of 28 snake venoms. Crude venoms from Daboia russellii siamensis, Bothrops asper, Bothrops moojeni, and one Crotalus oreganus helleri from Wrightwood, CA, had procoagulant activity. These venoms induced a significant shortening of the ACT and showed a significant increase in the clot rate when compared to the negative control. Factor X activator activity was also measured in 28 venoms, and D. r. siamensis venom was 5-6 times higher than those of B. asper, B. moojeni, and C. o. helleri from Wrightwood County. Russell's viper venom-factor X activator (RVV-X) was purified from D. r. siamensis venom, and then procoagulant activity was evaluated by the ACT and clot rate. Other venoms, Crotalus atrox and two Naja pallida, had anticoagulant activity. A significant increase in the ACT and a significant decrease in the clot rate were observed after the addition of these venoms; therefore, the venoms were considered to have anticoagulant activity. Venoms from the same species did not always have the same ACT and clot rate profiles, but the profiles were an excellent way to identify procoagulant and anticoagulant activities in snake venoms. PMID:20677373

  6. Food resources influence spatial ecology, habitat selection, and foraging behavior in an ambush-hunting snake (Viperidae: Bothrops asper): an experimental study.

    PubMed

    Wasko, Dennis K; Sasa, Mahmood

    2012-06-01

    Prey availability affects many aspects of predators' life history and is considered a primary factor influencing individuals' decisions regarding spatial ecology and behavior, but few experimental data are currently available. Snakes may represent ideal model organisms relative to other animal groups for addressing such resource dependency, due to a presumably more direct link between food resources and many aspects of behavior and natural history. We experimentally investigated the relationship between food intake and spatial behavior in a population of the snake Bothrops asper in a Costa Rican lowland rainforest. Six adult snakes were allowed to forage naturally while six were offered supplemental food in the field, with both groups monitored using radiotelemetry. Mean home range size did not differ between groups presumably due to small sample size, but supplementally fed snakes demonstrated altered patterns of macro- and microhabitat selection, shorter and less frequent movements, and increased mass acquisition. Fed snakes also devoted less time to foraging efforts, instead more frequently remaining inactive and utilizing shelter. Because snakes were always fed in situ and not at designated feeding stations, observed shifts in habitat selection are not explained by animals simply moving to areas of higher food availability. Rather, B. asper may have moved to swamps in order to feed on amphibians when necessary, but remained in preferred forest habitat when food was otherwise abundant. The strong behavioral and spatiotemporal responses of snakes in this population may have been influenced by an overall scarcity of mammalian prey during the study period. PMID:22440190

  7. On the systematics of Trimeresurus labialis Fitzinger in Steindachner, 1867, a pitviper from the Nicobar Islands (India), with revalidation of Trimeresurus mutabilis Stoliczka, 1870 (Squamata, Viperidae, Crotalinae).

    PubMed

    Vogel, Gernot; David, Patrick; Chandramouli, S R

    2014-01-01

    The Asian pitviper currently identified as Trimeresurus labialis Fitzinger in Steindachner, 1867 is revised on the basis of morphological data obtained from 37 preserved specimens originating from seven islands of the Nicobar Islands. Multivariate analyses shows that these specimens can be divided into two clusters of populations which differ by a series of constant taxonomically informative morphological characters. The first cluster, which includes the name-bearing types of Trimeresurus labialis Fitzinger in Steindachner, 1867, is present only on Car Nicobar Island. The second cluster, which includes the name-bearing types of Trimeresurus mutabilis Stoliczka, 1870, is distributed on the Central Nicobar Islands. We regard these clusters as distinct species, which are morphologically diagnosable and isolated from each other. As a consequence, Trimeresurus mutabilis, long considered a synonym of T. labialis, is here resurrected to specific level. A lectotype is designated for Trimeresurus mutabilis. PMID:24869554

  8. ["Lingue di seripi", "serpents' tongues" and "glossopetrae". Highlights from the history of popular "cult" medicine in early modern times].

    PubMed

    Freller, T

    1997-01-01

    In the 16th, 17th and 18th century "Glossopetrae", popularly known as "Lingue di Serpi", found on the Mediterranean island of Malta, were extensively used for medical purposes as antidotes. These fossil teeth, including specimens of the "Carcharodon Megalodon" (an extinct variant of the great white shark), were ground to powder or used as amulet pendants and "credence" and exported to pharmacies and shops in various cities of Europe. In antiquity, authors like Plinius or Solinus, excluding any religious connotations, had regarded "Glossopetrae" as objects "fallen from heaven on dark moonless nights". However, from the beginning of the 16th century the miraculous antidotic power of the specimens found at Malta was very strongly connected with the Pauline cult there. This cult owed ist origin to the excerpt of the shipwreck of the Apostle of the Gentiles on this island, as recorded in the New Testament. As in so many cases found in medieval and early modern medicine and pharmacy, the renown, collection, distribution and use of the antidote "Glossopetrae" or "Lingue di Serpi" was never limited to its real chemical and pharmaceutical properties. In the period of enlightenment and secular thinking mythic medicine as "Glossopetrae" had lost ist "magical" power. Consequently, with beginning of the late 18th century also the Maltese "Glossopetrae" featured in literature merely as exotic objects of curiosity or symbols of an age bound to medical superstition. PMID:9333999

  9. A new canopy-dwelling species of Dendrelaphis (Serpentes: Colubridae) from Sinharaja, World Heritage Site, Sri Lanka.

    PubMed

    Wickramasinghe, L J Mendis

    2016-01-01

    A new species of Dendrelaphis, Dendrelaphis sinharajensis sp. nov. is described, the sixth species of the genus known from Sri Lanka. The new species is readily distinguished from all other congeners by its colour pattern and scalation. The species is a canopy-dweller known only from the Sinharaja World Heritage Site and its vicinity, in the lowland wet zone of Sri Lanka. PMID:27615987

  10. Lessons Learned from Cosmic Serpent: A Professional Development Project for Informal Educators on Science and Native Ways of Knowing

    NASA Astrophysics Data System (ADS)

    Peticolas, L. M.; Maryboy, N.; Begay, D.; Paglierani, R.; Frappier, R.; Teren, A.

    2011-09-01

    How can one engage native communities and the public alike in understanding nature and our universe? Our approach has been to bring together practitioners at informal science centers, cultural museums, and tribal museums to develop relationships cross-culturally, to learn about different ways of studying and learning about nature and our universe, and to start to develop informal education programs or exhibits at their institution through their new understandings and peer networks. The design of this National Science Foundation (NSF) grant has been to provide an initial week-long professional development workshop in a region in the Western U.S. with a follow-up workshop in that region the following year, culminating in a final conference for all participants. We focus on three regions: the southwest (Utah, Arizona, New Mexico, and Colorado), the northwest (Alaska, Washington, and Oregon); and California. We are in our third year of our four-year grant and have in this time organized and run three regional week-long workshops and a follow-up workshop in the southwest. We have learned many lessons through this work, including: the importance of incorporating workshop participants as presenters in the workshop agenda; how the content of astronomy, ecology, and health resonates with these museum professionals and can easily be discussed with different world views in this type of cross-cultural science education; and how to best present different ways of knowing how nature and our universe work (science) in a manner that provides a context for science educators and museum professionals. In this article, we share these and other lessons we have learned from the leadership perspective of bringing together such a diverse and under-represented-in-science group of educators.

  11. Systematics of Nothopsini (Serpentes, Dipsadidae), with a new species of Synophis from the Pacific Andean slopes of southwestern Ecuador

    PubMed Central

    Pyron, R. Alexander; Guayasamin, Juan M.; Peñafiel, Nicolás; Bustamante, Lucas; Arteaga, Alejandro

    2015-01-01

    Abstract Within Dipsadinae, some recent authors have recognized a tribe Nothopsini containing the genera Diaphorolepis, Emmochliophis, Nothopsis, Synophis, and Xenopholis, on the basis of a number of putative morphological synapomorphies. However, molecular results suggest that Nothopsis, Synophis, and Xenopholis do not form a monophyletic group, while the remaining taxa are unsampled in recent molecular phylogenies. Here, DNA-sequence data for some Diaphorolepis and Synophis species are provided for the first time, as well as additional new sequences for Nothopsis and some Synophis species. Including these and other existing data for nothopsine species, previous studies showing that Nothopsini is not a natural group are corroborated. Nothopsini Cope, 1871 is restricted to Nothopsis. Diaphorolepidini Jenner, 1981 is resurrected and re-delimited to include only Diaphorolepis, Emmochliophis, and Synophis. Finally, Xenopholis remains Dipsadinae incertae sedis. Known material of Diaphorolepidini is reviewed to generate revised and expanded descriptions and diagnoses at the tribe, genus, and species level. Numerous cryptic species are likely present in Synophis bicolor and Synophis lasallei. Finally, a new population from the low-elevation cloud forests of SW Ecuador is reported upon, which is genetically and morphologically distinct from all other species, that is here named Synophis zaheri sp. n. PMID:26798284

  12. Systematics of Nothopsini (Serpentes, Dipsadidae), with a new species of Synophis from the Pacific Andean slopes of southwestern Ecuador.

    PubMed

    Pyron, R Alexander; Guayasamin, Juan M; Peñafiel, Nicolás; Bustamante, Lucas; Arteaga, Alejandro

    2015-01-01

    Within Dipsadinae, some recent authors have recognized a tribe Nothopsini containing the genera Diaphorolepis, Emmochliophis, Nothopsis, Synophis, and Xenopholis, on the basis of a number of putative morphological synapomorphies. However, molecular results suggest that Nothopsis, Synophis, and Xenopholis do not form a monophyletic group, while the remaining taxa are unsampled in recent molecular phylogenies. Here, DNA-sequence data for some Diaphorolepis and Synophis species are provided for the first time, as well as additional new sequences for Nothopsis and some Synophis species. Including these and other existing data for nothopsine species, previous studies showing that Nothopsini is not a natural group are corroborated. Nothopsini Cope, 1871 is restricted to Nothopsis. Diaphorolepidini Jenner, 1981 is resurrected and re-delimited to include only Diaphorolepis, Emmochliophis, and Synophis. Finally, Xenopholis remains Dipsadinae incertae sedis. Known material of Diaphorolepidini is reviewed to generate revised and expanded descriptions and diagnoses at the tribe, genus, and species level. Numerous cryptic species are likely present in Synophis bicolor and Synophis lasallei. Finally, a new population from the low-elevation cloud forests of SW Ecuador is reported upon, which is genetically and morphologically distinct from all other species, that is here named Synophis zaheri sp. n. PMID:26798284

  13. On the status of three nominal species in the synonymy of Dendrelaphis calligaster (Günther, 1867) (Serpentes: Colubridae).

    PubMed

    Rooijen, Johan Van; Vogel, Gernot

    2016-01-01

    The taxonomic status of three nominal species in the synonymy of the wide ranging Australo-Papuan snake Dendrelaphis calligaster (Günther, 1867) was investigated. Dendrophis meeki Boulenger, 1895 was shown to represent an insular population of D. gastrostictus instead of D. calligaster and is therefore transferred to the synonymy of the former. A description is given of the syntypes of D. meeki. Dendrelaphis calligaster distinguendus Meise & Hennig, 1932 was found to be fairly distinct from other populations of D. calligaster. However, it is not diagnosable and may not represent an independently evolving lineage. Therefore, its placement in the synonymy of D. calligaster is maintained. A neotype (ZMB 24024) is designated and described because the original types were destroyed during World War II. Finally, Dendrophis salomonis Günther, 1872 was demonstrated to be indistinct from the D. calligaster metapopulation. It too is maintained in the synonymy of D. calligaster. A description of the syntypes is provided. PMID:27394497

  14. Molecular phylogeny and taxonomy of the Epictia goudotii Species complex (Serpentes: Leptotyphlopidae: Epictinae) in Middle America and northern South America

    PubMed Central

    McCranie, James R.

    2016-01-01

    Here we review the systematics of the threadsnakes of the Epictia goudotii Species complex in Middle and northern South America using external morphology and molecular data. Two species, Epictia goudotii and E. magnamaculata, are currently recognized from that region, but we provide evidence for recognizing, as species, three other nominal forms usually treated as subspecies of E. goudotii: E. ater, E. bakewelli, and E. phenops. Thus, together with E. columbi (Bahamas), we recognize six species in the Epictia goudotii Species complex. Because E. albifrons from northern South America has been confused with E. goudotii in the past, we also briefly discuss the taxonomic status of that species and its apparent close relative E. tenella, which are not members of the E. goudotii complex. PMID:26788430

  15. The unexpected discovery of blind snakes (Serpentes: Typhlopidae) in Micronesia: Two new species of Ramphotyphlops from the Caroline Islands

    USGS Publications Warehouse

    Wynn, A.H.; Reynolds, R.P.; Buden, D.W.; Falanruw, M.; Lynch, B.

    2012-01-01

    Two new blind snakes in the genus Ramphotyphlops are described from Ulithi (R. hatmaliyeb sp. nov.) and Ant Atoll (R. adocetus sp. nov.) in the Caroline Islands, the first blind snake species known from Micronesia east of Palau (excluding Ramphotyphlops braminus). Both species are unusual in being known only from small, low-lying atolls. They can be distinguished from other Ramphotyphlops by the combination of 22 scale rows over the length of the body; a wedge-shaped snout, without a keratinized keel; and a broad, pyriform (R. adocetus) or ovate (R. hatmaliyeb) rostral scale.

  16. The unexpected discovery of blind snakes (Serpentes: Typhlopidae) in Micronesia: two new species of Ramphotyphlops from the Caroline Islands

    USGS Publications Warehouse

    Wynn, Addison H.; Reynolds, Robert P.; Buden, Donald W.; Falanruw, Marjorie; Lynch, Brian

    2012-01-01

    Two new blind snakes in the genus Ramphotyphlops are described from Ulithi (R. hatmaliyeb sp. nov.) and Ant Atoll (R. adocetus sp. nov.) in the Caroline Islands, the first blind snake species known from Micronesia east of Palau (excluding Ramphotyphlops braminus). Both species are unusual in being known only from small, low-lying atolls. They can be distinguished from other Ramphotyphlops by the combination of 22 scale rows over the length of the body; a wedge-shaped snout, without a keratinized keel; and a broad, pyriform (R. adocetus) or ovate (R. hatmaliyeb) rostral scale.

  17. "Have You, My Little Serpents, a New Skin?" Transforming English Studies and the Scholarship of Teaching and Learning

    ERIC Educational Resources Information Center

    Easton, Lee; Hewson, Kelly

    2012-01-01

    King and Knight (2010) argue that English Studies' instructors must "articulate and develop their tacit assumptions [about English teaching] and create a discipline-grounded idiom for pedagogical research and reflection" (p. 323). We suggest that the scholarship of teaching and learning (SoTL) invites English educators to reflect more…

  18. The Eagle, the Jaguar, and the Serpent. Indian Art of the Americas; North America: Alaska, Canada, the United States.

    ERIC Educational Resources Information Center

    Covarrubias, Miguel

    The origins of Native Americans are traced through art forms in this history of American art. The basic time periods for this history are determined and defined as the formative horizon, the classic horizon, and the historical horizon. Art forms used throughout these time periods are described in terms of technique and aesthetics. The arts and…

  19. Phylogeography across a continent: the evolutionary and demographic history of the North American racer (Serpentes: Colubridae: Coluber constrictor).

    PubMed

    Burbrink, Frank T; Fontanella, Frank; Alexander Pyron, R; Guiher, Timothy J; Jimenez, Cynthia

    2008-04-01

    Most phylogeographic studies examine organisms that do not have transcontinental distributions and therefore the genetic and temporal effects of barriers across an entire continent cannot be assessed with respect to a single species. We examined the phylogeographic structure, lineage age, and historical demography using sequences from the mtDNA cytochrome b gene of the widespread North American racer (Coluber constrictor), one of the few abundant transcontinental snakes that occurs throughout many diverse biomes. Our results indicate that this complex is comprised of six lineages differing greatly in geographic extent, with the largest (a central US clade) being approximately 26 times greater than the smallest (a lineage restricted to the Florida Panhandle and nearby portions of adjacent States). Most of the six lineages appear to be separated at previously identified genetic barriers for several vertebrates with similar ranges. Lineage diversification in this species began in the late Miocene, separating populations in the Florida Peninsula from the remainder of the US. Diversification of lineages continued throughout the Pliocene and early Pleistocene. Four of the six lineages occur east of the Mississippi River, with only two distinctly young ( approximately 1.5 mya) lineages found west of the Mississippi River (one occurs west of Continental Divide). All methods of demographic inference, including the mismatch distribution, Fu and Li's D and Tajima's D , and Bayesian skyline plots revealed population expansion occurring in the mid-to-late Pleistocene for every lineage, regardless of size or proximity to formerly glaciated areas. Population expansion for lineages found east of the Mississippi River occurred earlier and was much greater than those found west of the River. PMID:18093846

  20. The real identity of Leptodira nycthemera Werner, 1901 from Ecuador: a junior synonym of Oxyrhopus petolarius (Linnaeus, 1758) (Serpentes, Dipsadidae)

    PubMed Central

    Costa, João Carlos Lopes; Kucharzewski, Christoph; Prudente, Ana Lúcia da Costa

    2015-01-01

    Abstract Leptodira nycthemera Werner, 1901, was described from a specimen collected in Ecuador. No information on the holotype was published after its description. In the most recent review of Leptodeira, Leptodira nycthemera was considered to be a synonym of Leptodeira annulata annulata, although the author emphasized that the holotype was lost and did not include the pholidotic data from the original description in his account of Leptodeira annulata annulata. Since this review, a number of authors have accepted this synonymy. Recently, analyzing specimens of Leptodeira in the Museum für Naturkunde, Berlin, Germany, we discovered the holotype of Leptodira nycthemera. This holotype is re-described here, and its correct identity is determined. Based on the analysis of meristic characters and the color of the holotype, we recognize Leptodira nycthemera as a junior synonym of Oxyrhopus petolarius. PMID:26085798

  1. Genetic differentiation among species of the genus Thermophis Malnate (Serpentes, Colubridae) and comments on T. shangrila.

    PubMed

    Hofmann, Sylvia; Tillack, Frank; Miehe, Georg

    2015-01-01

    The genus Thermophis includes the two species, T. baileyi and T. zhaoermii, which differ morphologically, geographically and molecularly. Recently, a third Thermophis species was described from Shangri-La, northern Yunnan Province, China, and named T. shangrila. The new species was based on morphological and genetic data derived from three specimens. However, the morphological features used to delimit this species seem vague, because they may fall within the range of intraspecific variation of T. zhaoermii. Furthermore, the reported genetic differences in nuclear data are questionable. They likely resulted from a misinterpretation probably due to alignment/analytical flaws or sample/sequence mix-up. Here, we used partial sequences of three mitochondrial (CO1, ND4, cytb) genes and one nuclear (c-mos) gene to analyse the genetic variation between and within species of Thermophis. We inferred the phylogeny using Bayesian Inference and Maximum Likelihood approaches and present additional morphological data that contribute to the knowledge on intraspecific variation in the genus. Our results indicate lacking robustness in the distinguishing morphological features and in the genetic differentiation of T. shangrila and highlight the need for more detailed morphological and molecular studies from a substantially larger sample. PMID:26624298

  2. Choleoeimeria ghaffari n. sp. (Apicomplexa: Eimeriidae) from the gallbladder of Eryx jayakari Boulenger (Serpentes: Boidae) in Saudi Arabia.

    PubMed

    Abdel-Baki, Abdel-Azeem S; Al-Quraishy, Saleh; Duszynski, Donald W

    2014-02-01

    Choleoeimeria ghaffari n. sp. is described from the gallbladder of Eryx jayakari Boulenger in Saudi Arabia. Oöcysts are tetrasporocystic, cylindroidal, 23 × 14 μm, with a smooth bi-layered wall and length/width ratio of 1.5, without micropyle, oöcyst residuum and polar granule. Sporocysts are subspheroidal to ellipsoidal, 8 × 6 μm, with length/width ratio of 1.4, without Stieda, sub-Stieda and para-Stieda bodies but with sporocyst residuum. Sporozoites are banana-shaped measuring 10 × 1.5 μm. The endogenous development was found to occur in the gallbladder epithelium and the extrahepatic bile ducts. Mature meronts are spheroidal, c.10 μm wide, and suspected to produce 12-16 merozoites. Microgamonts are irregular in shape, 13 × 10 μm, whereas macrogamonts are mostly subspheroidal, c.12 μm wide, with a prominent centrally-located nucleus. Based on oöcyst morphology and the site of endogenous development (epithelium of the gallbladder and bile ducts) the new eimeriid coccidian was placed in the genus Choleoeimeria Paperna & Landsberg, 1989. PMID:24474042

  3. Physiological, ecological, and behavioural correlates of the size of the geographic ranges of sea kraits (Laticauda; Elapidae, Serpentes): A critique

    NASA Astrophysics Data System (ADS)

    Heatwole, Harold; Lillywhite, Harvey; Grech, Alana

    2016-09-01

    Recent, more accurate delineation of the distributions of sea kraits and prior dubious use of proxy temperatures and mean values in correlative studies requires re-assessment of the relationships of temperature and salinity as determinants of the size of the geographic ranges of sea kraits. Correcting the sizes of geographic ranges resolved the paradox of lack of correspondence of size of range with degree of terrestrialism, but did not form a definitive test of the theory. Recent ecological, physiological, and behavioural studies provide an example of the kind of approach likely to either validate or refute present theory.

  4. A new species of Hepatozoon (Apicomplexa: Adeleorina) from Python regius (Serpentes: Pythonidae) and its experimental transmission by a mosquito vector.

    PubMed

    Sloboda, Michal; Kamler, Martin; Bulantová, Jana; Votýpka, Jan; Modrý, David

    2007-10-01

    Hepatozoon ayorgbor n. sp. is described from specimens of Python regius imported from Ghana. Gametocytes were found in the peripheral blood of 43 of 55 snakes examined. Localization of gametocytes was mainly inside the erythrocytes; free gametocytes were found in 15 (34.9%) positive specimens. Infections of laboratory-reared Culex quinquefasciatus feeding on infected snakes, as well as experimental infection of juvenile Python regius by ingestion of infected mosquitoes, were performed to complete the life cycle. Similarly, transmission to different snake species (Boa constrictor and Lamprophis fuliginosus) and lizards (Lepidodactylus lugubris) was performed to assess the host specificity. Isolates were compared with Hepatozoon species from sub-Saharan reptiles and described as a new species based on the morphology, phylogenetic analysis, and a complete life cycle. PMID:18163356

  5. Cryptodacus Hendel, 1914 (Insecta: Diptera: TEPHRITIDAE): Proposed conservation by suppression of Cryptodacus Gundlach, 1862 (Reptilia: Serpentes: COLUBRIDAE)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The purpose of this application under Articles 78.1, 80.2.2, and 81.2.1 is to conserve current usage of the well-established genus-group name Cryptodacus Hendel, 1914 for a genus of Neotropical fruit flies by suppression of the earlier name Cryptodacus Gundlach, 1862, currently a junior synonym of A...

  6. Three new endemic species of Epictia Gray, 1845 (Serpentes: Leptotyphlopidae) from the dry forest of northwestern Peru.

    PubMed

    Koch, Claudia; Venegas, Pablo J; Böhme, Wolfgang

    2015-01-01

    Three new blind snake species of the genus Epictia are described based on material collected in the Peruvian Regions Amazonas, Cajamarca and La Libertad. All three species are well differentiated from all congeners based on characteristics of their morphology and coloration. They share 10 scale rows around the middle of the tail and possess two supralabials with the anterior one in broad contact with the supraocular. Epictia septemlineata sp. nov. has 16 subcaudal scales, 257 mid-dorsal scale rows, a yellowish-white rostral, and a black terminal spine. Epictia vanwallachi sp. nov. exhibits 16 subcaudals, 188 mid-dorsal scale rows, a grayish-brown rostral, and a yellow terminal spine. Epictia antoniogarciai sp. nov. features 14-18 subcaudals, 195-208 mid-dorsal scale rows, a bright yellow or yellowish-white rostral, and the terminal spine and terminal portion of the tail yellow. All three species were collected in the interandean dry forest valleys of the Marañón River and its tributaries. This region is an area of endemism and warrants further attention from systematic and conservation biologists. PMID:26249433

  7. Annotated checklist of the recent and extinct pythons (Serpentes, Pythonidae), with notes on nomenclature, taxonomy, and distribution

    PubMed Central

    Schleip, Wulf D.; O’Shea, Mark

    2010-01-01

    Abstract McDiarmid et al. (1999) published the first part of their planned taxonomic catalog of the snakes of the world. Since then, several new python taxa have been described in both the scientific literature and non-peer-reviewed publications. This checklist evaluates the nomenclatural status of the names and discusses the taxonomic status of the new taxa, and aims to continue the work of McDiarmid et al. (1999) for the family Pythonidae, covering the period 1999 to 2010. Numerous new taxa are listed, and where appropriate recent synonymies are included and annotations are made. A checklist and a taxonomic identification key of valid taxa are provided. PMID:21594030

  8. Case 3693 Cryptodacus Hendel, 1914 (Insecta: Diptera: Tephritidae): Proposed suppression of Cryptodacus Gundlach, 1862 (Reptilia, Serpentes, Colubridae)

    USGS Publications Warehouse

    Norrbom, Allen L.; McDiarmid, Roy W.; Chen, Xiao-Lin; David, King J.; De Meyer, Marc; Freidberg, Amnon; Han, Ho-Yeon; Steck, Gary J.; Thompson, F. Christian; White, Ian M.; Zucchi, Roberto A.

    2015-01-01

    The purpose of this application, under Article 23.9.3, is to conserve current usage of the well-established genus-group name Cryptodacus Hendel, 1914 for a genus of Neotropical fruit flies by suppression of the earlier, unused name Crypto- dacus Gundlach, 1862, currently a junior synonym of Arrhyton Günther, 1858, a genus of snakes, under the plenary power of the Commission, in the interest of nomenclatural stability. Cryptodacus Gundlach has not been used as a valid name since 1883, whereas Cryptodacus Hendel has been used in a significant body of literature relating to fruit fly systematics, morphology and phylogeny and is the currently used name in various name and molecular databases. 

  9. Recruitment of striatonigral disinhibitory and nigrotectal inhibitory GABAergic pathways during the organization of defensive behavior by mice in a dangerous environment with the venomous snake Bothrops alternatus (Reptilia, Viperidae).

    PubMed

    Almada, Rafael Carvalho; Coimbra, Norberto Cysne

    2015-06-01

    The neuropsychopharmacological basis of fear- or panic-related behavior has been the focus of several studies. Some mesencephalic tectum (MT) structures, such as the superior colliculus (SC) and dorsal periaqueductal gray matter (dPAG), are considered to be responsible for the control of defensive responses evoked during threatening situations. Furthermore, the pars reticulata of the substantia nigra (SNpr) sends inputs to the SC that can work as a sensory channel to MT neurons fundamental for the elaboration of defensive responses. The purpose of the present study was to investigate the role of striato-nigral GABAergic inputs in the activity of nigro-tectal outputs during the elaboration of defensive behavior using a GABA(A) receptor selective blockade in the MT of mice confronted pre-treated with Bothrops alternatus. Mice with injections of physiological saline into the SNpr and treated with a GABA(A) receptor selective antagonist in the MT displayed an increase in panic-related behavior, expressed by an increase in the duration of freezing, frequency of nonoriented escape and frequency of total escape responses during the confrontation with the snake. However, intra-SNpr injections of cobalt chloride followed by MT injections of bicuculline caused a significant decrease in the duration of freezing and total escape responses. In addition, intra-SNpr injections of lidocaine followed by MT injections of bicuculline caused an increase in panic-related behavior. The results highlight the involvement of SNpr and MT structures in the organization of defensive behaviors and suggest an inhibitory control of striatonigral-nigrotectal pathways during the elaboration of fear- and panic-related behavior. PMID:25727065

  10. Biological and immunological properties of the venom of Bothrops alcatraz, an endemic species of pitviper from Brazil.

    PubMed

    Furtado, M F D

    2005-06-01

    Bothrops alcatraz is a new pitviper species derived from the Bothrops jararaca group, whose natural habitat is situated in Alcatrazes Archipelago, a group of marine islands near São Paulo State coast in Brazil. Herein, the biological and biochemical properties of venoms of four adult specimens of B. alcatraz were examined comparatively to a reference pool of Bothrops jararaca venom. Both venoms showed similar activities and electrophoretic patterns, but B. alcatraz venom showed three protein bands of molecular masses of 97, 80 and 38 kDa that were not present in B. jararaca reference venom. The i.p. median lethal dose of B. alcatraz venom ranged from 5.1 to 6.6 mg/kg, while it was 1.5 mg/kg for B. jararaca venom. The minimum hemorrhagic dose of B. jararaca venom was 0.63, whereas 2.28 mug/mouse for B. alcatraz venom. In contrast, B. alcatraz venom was more potent in regard to procoagulant and proteolytic activities. These differences were supported by western blotting and neutralization tests, employing commercial bothropic antivenom, which showed that hemorrhagic and lethal activities of B. alcatraz venom were less effectively inhibited than B. jararaca venom. Such results evidence that B. alcatraz shows quantitative and qualitative differences in venom composition in comparison with its B. jararaca relatives, which might represent an optimization of venom towards a specialized diet. PMID:16002343

  11. Optimization of geometry, material and economic parameters of a two-zone subcritical reactor for transmutation of nuclear waste with SERPENT Monte Carlo code

    NASA Astrophysics Data System (ADS)

    Gulik, Volodymyr; Tkaczyk, Alan Henry

    2014-06-01

    An optimization study of a subcritical two-zone homogeneous reactor was carried out, taking into consideration geometry, material, and economic parameters. The advantage of a two-zone subcritical system over a single-zone system is demonstrated. The study investigated the optimal volume ratio for the inner and outer zones of the subcritical reactor, in terms of the neutron-physical parameters as well as fuel cost. Optimal geometrical parameters of the system are suggested for different material compositions.

  12. "So it really does exist-the sea-Serpent we've never believed in!" Ferenczi's influence on Freud revisited.

    PubMed

    Bonomi, Carlo

    2013-12-01

    In the last phase of his work, Ferenczi created a new language for trauma, based on the fragmentation of mental life. In the paper on "The principles of relaxation and neocatharsis," Ferenczi reformulated the goal of analysis by proposing that "no analysis can be regarded … as complete unless we have succeed in penetrating the traumatic material", where the "traumatic material" was not to be sought in the neurotic reactions and adaptive solutions of the ego but in more primitive reactions, such as the psychotic turning away from reality, splitting, and fragmentation. This was exactly the material that Freud assimilated in the essay "A disturbance of memory on the Acropolis", after the death of Ferenczi. Freud visited Athens in 1904, and the walk up to the Parthenon represented the successful coronation of his self-analysis. Actually, the hallucination turned out to be so uncanny that he never again visited Athens. In a letter to Fliess, written shortly before the meeting in Nuremberg, on January 24, 1897, Freud reported on a case history turning on a "scene about the circumcision of a girl," who later was convincingly identified by Schur as Emma Eckstein. Did Freud have the germinal idea that Emma Eckstein's hallucination of the penis contained the wish to overcome her trauma and the hope to have a restored genital? Is this the holy visitation, which haunted him on the Acropolis? Why did he give up the profound insight that the dreams of gigantic snakes had a traumatic origin? PMID:24309686

  13. Geographic genetic structure in two laticaudine sea kraits, Laticauda laticaudata and Laticauda semifasciata (Serpentes: Elapidae), in the Ryukyu-Taiwan region as inferred from mitochondrial cytochrome b sequences.

    PubMed

    Tandavanitj, Nontivich; Ota, Hidetoshi; Cheng, Yuan-Cheng; Toda, Mamoru

    2013-08-01

    The Ryukyu-Taiwan region is an island arch with intervening waters of varying distances and depths. This study examines the geographic genetic structure of two sympatric sea kraits, Laticauda laticaudata and L. semifasciata, in the region, to infer factors affecting the extent of dispersal and other biogeographical traits of these amphibious reptiles. Sequence analyses of the mitochondrial cytochrome b gene revealed four and 16 haplotypes for L. laticaudata (136 individuals) and L. semifasciata (177 individuals), respectively. For both species, population pairwise F ST analyses revealed significant genetic differentiations among islands and island groups, which are separated by deep straits, suggesting that deep waters serve as obstacles for dispersal in both species. Significant genetic differentiation was detected even among islands of the same basin in L. laticaudata, but not in L. semifasciata, and the isolation by distance analyses revealed no significant correlation between geographic and genetic distances in the former species. These results further suggest that L. laticaudata has stronger site fidelity or degree of philopatry than L. semifasciata. Based on the geographic genetic patterns, the historical biogeography of the two species in the Ryukyu-Taiwan region is also discussed. PMID:23915156

  14. A new species of Serpentirhabdias Tkach, Kuzmin & Snyder, 2014 (Nematoda: Rhabdiasidae) parasitic in the brown ground snake Atractus major Boulenger (Reptilia: Serpentes: Dipsadidae) in Brazil.

    PubMed

    Kuzmin, Yuriy; Melo, Francisco Tiago de Vasconcelos; dos Santos, Jeannie Nascimento

    2014-10-01

    Serpentirhabdias atracti n. sp. is described based on specimens discovered in the lung of Atractus major Boulenger from Caxiuanã National Forest, Pará, Brazil. The new species is assigned to Serpentirhabdias Tkach, Kuzmin & Snyder, 2014 based on morphological characters (comparatively thin body cuticle without prominent inflations, arrangement of circumoral papillae in two lateral groups, pre-equatorial position of vulva, eggs in uteri at early cleavage stages), as well as because of its parasitism in snakes. The new species is most similar to S. vellardi (Pereira, 1928) due to the absence of lips and buccal capsule, similar body dimensions, and the specificity to dipsadid snakes in Brazil. The two species differ in the shape of the tail (bulbous dilatation in the posterior part followed by a thread-like tail tip present in S. atracti n. sp.), the width of the oesophagus, and the size of the excretory glands. Serpentirhabdias atracti n. sp. is the sixth species of this genus found in the Neotropical Region. PMID:25204597

  15. Redescription of Haemogregarina garnhami (Apicomplexa: Adeleorina) from the blood of Psammophis schokari (Serpentes: Colubridae) as Hepatozoon garnhami n. comb. based on molecular, morphometric and morphologic characters.

    PubMed

    Abdel-Baki, Abdel-Azeem S; Al-Quraishy, Saleh; Zhang, J Y

    2014-06-01

    Hepatozoon garnhami n. comb. was redescribed from Schokari sand snakes (Psammophis schokari) collected from Riyadh city in Saudi Arabia. Gametocytes were found in the peripheral blood of 2 of 15 snakes examined. Based on the similar morphological and morphometric characteristics, the same host and a similar host habitat environment, it can be concluded for the first time that the present species is conspecific with Haemogregarina garnhami previously reported from Psammophis shokari aegyptius. To further characterize this parasite, the partial 18S rRNA gene was amplified and sequenced. The sequence analysis also showed that Haemogregarina garnhami should be reassigned into the genus Hepatozoon as Hepatozoon garnhami which has 99.5% (859/863 bp) sequence similarity to Hepatozoon ayorgbor, infecting the erythrocytes of Python regius in Ghana. Phylogenetic analysis showed that H. garnhami formed a mixed clade with Hepatozoon spp. from geckos, snakes and rodents and ophidian Hepatozoon spp. did not form a separated phylogenetic unit. Also, Psammophis schokari-infecting Hepatozoon contained several different genetic lineages. To our knowledge, the present work extends the geographic distribution of H. garnhami and is the first report of Hepatozoon infection in snakes from Saudi Arabia. PMID:24827101

  16. Genetic divergence and diversity in the Mona and Virgin Islands Boas, Chilabothrus monensis (Epicrates monensis) (Serpentes: Boidae), West Indian snakes of special conservation concern.

    PubMed

    Rodríguez-Robles, Javier A; Jezkova, Tereza; Fujita, Matthew K; Tolson, Peter J; García, Miguel A

    2015-07-01

    Habitat fragmentation reduces the extent and connectivity of suitable habitats, and can lead to changes in population genetic structure. Limited gene flow among isolated demes can result in increased genetic divergence among populations, and decreased genetic diversity within demes. We assessed patterns of genetic variation in the Caribbean boa Chilabothrus monensis (Epicrates monensis) using two mitochondrial and seven nuclear markers, and relying on the largest number of specimens of these snakes examined to date. Two disjunct subspecies of C. monensis are recognized: the threatened C. m. monensis, endemic to Mona Island, and the rare and endangered C. m. granti, which occurs on various islands of the Puerto Rican Bank. Mitochondrial and nuclear markers revealed unambiguous genetic differences between the taxa, and coalescent species delimitation methods indicated that these snakes likely are different evolutionary lineages, which we recognize at the species level, C. monensis and C. granti. All examined loci in C. monensis (sensu stricto) are monomorphic, which may indicate a recent bottleneck event. Each population of C. granti exclusively contains private mtDNA haplotypes, but five of the seven nuclear genes assayed are monomorphic, and nucleotide diversity is low in the two remaining markers. The faster pace of evolution of mtDNA possibly reflects the present-day isolation of populations of C. granti, whereas the slower substitution rate of nuDNA may instead mirror the relatively recent episodes of connectivity among the populations facilitated by the lower sea level during the Pleistocene. The small degree of overall genetic variation in C. granti suggests that demes of this snake could be managed as a single unit, a practice that would significantly increase their effective population size. PMID:25837733

  17. Phylogenetic relationships within Bothrops neuwiedi group (Serpentes, Squamata): geographically highly-structured lineages, evidence of introgressive hybridization and Neogene/Quaternary diversification.

    PubMed

    Machado, Taís; Silva, Vinícius X; Silva, Maria José de J

    2014-02-01

    Eight current species of snakes of the Bothrops neuwiedi group are widespread in South American open biomes from northeastern Brazil to southeastern Argentina. In this paper, 140 samples from 93 different localities were used to investigate species boundaries and to provide a hypothesis of phylogenetic relationships among the members of this group based on 1122bp of cyt b and ND4 from mitochondrial DNA and also investigate the patterns and processes occurring in the evolutionary history of the group. Combined data recovered the B. neuwiedi group as a highly supported monophyletic group in maximum parsimony, maximum likelihood and Bayesian analyses, as well as four major clades (Northeast I, Northeast II, East-West, West-South) highly-structured geographically. Monophyly was recovered only for B. pubescens. By contrast, B. diporus, B. lutzi, B. erythromelas, B. mattogrossensis, B. neuwiedi, B. marmoratus, and B. pauloensis, as currently defined on the basis of morphology, were polyphyletic. Sympatry, phenotypic intergrades and shared mtDNA haplotypes, mainly between B. marmoratus and B. pauloensis suggest recent introgressive hybridization and the possible occurrence of a narrow hybrid zone in Central Brazil. Our data suggest at least three candidate species: B. neuwiedi from Espinhaço Range, B. mattogrossensis (TM173) from Serra da Borda (MT) and B. diporus (PT3404) from Castro Barros, Argentina. Divergence estimates highlight the importance of Neogene events in the origin of B. neuwiedi group, and the origin of species and diversification of populations of the Neotropical fauna from open biomes during the Quaternary climate fluctuations. Data reported here represent a remarkable increase of the B. neuwiedi group sampling size, since representatives of all the current recognized species from a wide geographic range are included in this study, providing basic information for understanding the evolution and conservation of Neotropical biodiversity. PMID:24140980

  18. The Seminole Serpent Warrior At Miramar, FL, Shows Settlement Locations Enabled Environmental Monitoring Reminiscent Of the Four-corners Kokopelli-like EMF Phenomena, and Related to Earthquakes, Tornados and Hurricanes.

    NASA Astrophysics Data System (ADS)

    Balam Matagamon, Chan; Pawa Matagamon, Sagamo

    2004-03-01

    Certain Native Americans of the past seem to have correctly deduced that significant survival information for their tradition-respecting cultures resided in EMF-based phenomena that they were monitoring. This is based upon their myths and the place or cult-hero names they bequeathed us. The sites we have located in FL have been detectable by us visually, usually by faint blue light, or by the elicitation of pin-like prickings, by somewhat intense nervous-system response, by EMF interactions with aural electrochemical systems that can elicit tinitus, and other ways. In the northeast, Cautantowit served as a harbinger of Indian summer, and appears to be another alter ego of the EMF. The Miami, FL Tequesta site along the river clearly correlates with tornado, earthquake and hurricane locations. Sites like the Mohave Deserts giant man may have had similar significance.

  19. Alsophinase, a new P-III metalloproteinase with α-fibrinogenolytic and hemorrhagic activity from the venom of the rear-fanged Puerto Rican Racer Alsophis portoricensis (Serpentes: Dipsadidae).

    PubMed

    Weldon, Caroline L; Mackessy, Stephen P

    2012-05-01

    Metalloproteinases from snake venoms are often multi-domain enzymes involved in degradation of a variety of structural proteins. Hemorrhage and tissue necrosis are common manifestations of viperid envenomations in humans, largely due to the actions of prominent metalloproteinases, and envenomation by rear-fanged snakes may also cause hemorrhage. We purified the major metalloproteinase in Alsophis portoricensis (Puerto Rican Racer) venom through HPLC size exclusion and ion exchange chromatography. Named alsophinase, it is the first protein purified and characterized from the venom of Alsophis. Alsophinase is a single polypeptide chain protein, and based on mass, activity and complete inhibition by 1,10-phenanthroline, it is a class P-III snake venom member of the M12 ADAM family of metalloproteinases. Alsophinase has a molecular mass of 56.003kDa and an N-terminal sequence of QDTYLNAKKYIEFYLVVDNGMFxKYSxxFTV, with 67% sequence identity to a metalloproteinase isolated from venom of Philodryas olfersii (another rear-fanged species). Alsophinase rapidly catalyzed cleavage of only the Ala14-Leu15 bond of oxidized insulin B chain, had potent hemorrhagic activity in mice, and degraded only the α-subunit of human fibrinogen in vitro. Alsophinase is responsible for hemorrhagic and fibrinogenolytic activity of crude venom, and it may contribute to localized edema and ecchymosis associated with human envenomations by A. portoricensis. It may be more specific in peptide bond recognition than many well-characterized viperid P-III metalloproteinases, and it could have utility as a new protein fragmentation enzyme for mass spectrometry studies. PMID:22349739

  20. Some aspects of the venom proteome of the Colubridae snake Philodryas olfersii revealed from a Duvernoy's (venom) gland transcriptome.

    PubMed

    Ching, Ana T C; Rocha, Marisa M T; Paes Leme, Adriana F; Pimenta, Daniel C; de Fátima D Furtado, Maria; Serrano, Solange M T; Ho, Paulo L; Junqueira-de-Azevedo, Inácio L M

    2006-08-01

    We investigated the putative toxins of Philodryas olfersii (Colubridae), a representative of a family of snakes neglected in venom studies despite their growing medical importance. Transcriptomic data of the venom gland complemented by proteomic analysis of the gland secretion revealed the presence of major toxin classes from the Viperidae family, including serine proteases, metalloproteases, C-type lectins, Crisps, and a C-type natriuretic peptide (CNP). Interestingly, the phylogenetic analysis of the CNP precursor showed it as a linker between two related precursors found in Viperidae and Elapidae snakes. We suggest that these precursors constitute a monophyletic group derived from the vertebrate CNPs. PMID:16857193

  1. 77 FR 30524 - Pesticide Products; Receipt of Applications To Register New Uses

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-05-23

    ..., Mediterranean mandarin, Mount White lime, New Guinea wild lime, Russell River lime, sweet lime, tachibana orange...-headed, serpent), lily (bulb), onion (bulbs of common, Chinese, pearl, potato), shallot (bulb)...

  2. RICIS Software Engineering 90 Symposium: Aerospace Applications and Research Directions Proceedings

    NASA Technical Reports Server (NTRS)

    1990-01-01

    Papers presented at RICIS Software Engineering Symposium are compiled. The following subject areas are covered: synthesis - integrating product and process; Serpent - a user interface management system; prototyping distributed simulation networks; and software reuse.

  3. Haematopoiesis in snakes (Ophidia) in early postnatal development.

    PubMed

    Dabrowski, Z; Sano Martins, I S; Tabarowski, Z; Witkowska-Pelc, E; Spadacci Morena, D D; Spodaryk, K; Podkowa, D

    2007-05-01

    The occurrence of haematopoiesis has been studied in various parts of the spine and in the ribs in four species of snakes (Boa constrictor L., Elaphe guttata L., Lamprophis fulaginosus Boie., Bothrops jararaca Wied.) from hatching until 150 days of postnatal development. Marrow spaces are formed by chondrolysis with various time frames depending on the studied species. Marrow cells egress to the general circulation in two ways: via migration through the endothelial cells lining the venous sinuses or by the rupture of protrusions. Erythroblasts are present in the lumen of marrow sinuses suggesting their final maturation there. Various relationships of the spleen to the pancreas have been found. No myelopoietic foci occur in the spleen, liver or kidney of any of the studied species. However, erythropoiesis (sparse islets) has been observed in Bothrops jararaca spleen. PMID:17225172

  4. Snakebite.

    PubMed

    Dutta, T K; Mukta, V

    2006-05-01

    The five families of poisonous snakes are: Viperidae, elapidae, colubridae, hydrophidae, atractaspididae. The commonly seen snakes in India are saw scaled viper, Russell's viper, common cobri and common crait. The venom of a single snake contains all the toxins. The venom of viperidae is haemotoxic. It may complicate with acute renal failure if left untreated. The venom of elapidae is neurotoxic. Management consists in two parts-general and specific. Supportive treatment is done with the use of antibiotics and tetanus immunoglobulin/toxoid. Specific therapy for viper bite is elaborated in this article. Elapid bite and hydrophidae bites are also discussed. Prevention of snakebite is done with avoidance of contact with a snake by using protective knee length footwear and thick gloves. Venom toxoids are used for secondary prevention among the farmers of Japan. PMID:17058570

  5. Comment on Spracklandus Hoser, 2009 (Reptilia, Serpentes, ELAPIDAE): request for confirmation of availability of the generic name and for the nomenclatural validation of the journal in which it was published (Case 3601; BZN 70:234–237; 71:30–38; 133-135,181-182 ,252-253)

    USGS Publications Warehouse

    Rhodin, Anders G.J.; Kaiser, Hinrich; van Dijk, Peter Paul; Wüster, Wolfgang; O’Shea, Mark; Archer, Michael; Auliya, Mark; Boitani, Luigi; Bour, Roger; Clausnitzer, Viola; Contreras-MacBeath, Topiltzin; Crother, Brian I.; Daza, Juan M.; Driscoll, Carlos A.; Flores-Villela, Oscar; Frazier, Jack; Fritz, Uwe; Gardner, Alfred L.; Gascon, Claude; Georges, Arthur; Glaw, Frank; Grazziotin, Felipe G.; Groves, Colin P.; Haszprunar, Gerhard; Havaš, Peter; Hero, Jean-Marc; Hoffmann, Michael; Hoogmoed, Marinus S.; Horne, Brian D.; Iverson, John B.; Jäch, Manfred; Jenkins, Christopher L.; Jenkins, Richard K.B.; Kiester, A. Ross; Keogh, J. Scott; Lacher, Thomas E., Jr.; Lovich, Jeffrey E.; Luiselli, Luca; Mahler, D. Luke; Mallon, David P.; Mast, Roderic; McDiarmid, Roy W.; Measey, John; Mittermeier, Russell A.; Molur, Sanjay; Mosbrugger, Volker; Murphy, Robert W.; Naish, Darren; Niekisch, Manfred; Ota, Hidetoshi; Parham, James F.; Parr, Michael J.; Pilcher, Nicolas J.; Pine, Ronald H.; Rylands, Anthony B.; Sanderson, James G.; Savage, Jay M.; Schleip, Wulf; Scrocchi, Gustavo J.; Shaffer, H. Bradley; Smith, Eric N.; Sprackland, Robert; Stuart, Simon N.; Vetter, Holger; Vitt, Laurie J.; Waller, Tomás; Webb, Grahame; Wilson, Edward O.; Zaher, Hussam; Thomson, Scott

    2015-01-01

    In Case 3601 Raymond Hoser has asked the Commission to validate for the purposes of nomenclature the name Spracklandus Hoser, 2009, and ‘the journal in which it was published,’ issue 7 of the Australasian Journal of Herpetology (AJH). We note that the entire run of AJH has been written, edited, and published solely by Hoser. Although his requests to the Commission were presented as narrow and, in his words, ‘routine matters,’ we are convinced that they represent an important tipping-point with broad implications of major concern for zoological taxonomy and nomenclature as a whole and, by extension, the greater scientific community. Since Hoser’s actions and works have failed to follow scientific best practices (e.g. Turtle Taxonomy Working Group, 2007, 2014; Kaiser et al., 2013; Kaiser, 2014) and both the Commission’s general Recommendations and Code of Ethics in Appendix A, the global herpetological community has widely rejected his taxonomic decisions and resultant nomenclature. This has unfortunately caused a confusing dual nomenclature to develop in the herpetological community, with most boycotting or ignoring Hoser’s 700+ new names coined in the AJH, while he and a few personal followers actively promote their usage. We believe that suppression of the name Spracklandus, and all issues of AJH, is the only effective way to bring this contentious and confusing issue to resolution. The plenary power available under Article 81.1 of the Code exist specifically to allow the Commission to make rulings in individual cases that disturb stability and cause confusion, whether the works are Code-compliant or not. We maintain that it is in the interest of nomenclatural stability, not only for herpetology, but for all of zoological taxonomy, that the plenary power be invoked to declare the works in AJH unavailable, regardless of any narrow interpretation of their technical Code-compliance. We present our arguments for rejection of the validity of AJH in the following commentary. In view of the wide-reaching implications of this case for all of zoology, and reflecting the deep and broad-based community concern over these issues, our contributing authors include 70 global scientific leaders and accomplished amateurs from a wide variety of zoological disciplines.

  6. Asclepius, Caduceus, and Simurgh as medical symbols, part I.

    PubMed

    Nayernouri, Touraj

    2010-01-01

    This is the first of two articles reviewing the history of medical symbols. In this first article I have briefly reviewed the evolution of the Greek god, Asclepius, (and his Roman counterpart Aesculapius) with the single serpent entwined around a wooden rod as a symbol of western medicine and have alluded to the misplaced adoption of the Caduceus of the Greek god Hermes (and his Roman counterpart Mercury) with its double entwined serpents as an alternative symbol. In the second part of this article (to be published later), I have made a tentative suggestion of why the Simorgh might be adopted as an Eastern or an Asian symbol for medicine. PMID:20039773

  7. Interior view, detail view of the balustrade; the balustrade is ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Interior view, detail view of the balustrade; the balustrade is cast bronze and consists of two ribbed posts alternating with a single post decorated with twisted serpents - New Post Office Building, Twelfth Street and Pennsylvania Avenue, Washington, District of Columbia, DC

  8. Software engineering activities at SEI (Software Engineering Institute)

    NASA Technical Reports Server (NTRS)

    Chittister, Clyde

    1990-01-01

    Prototyping was shown to ease system specification and implementation, especially in the area of user interfaces. Other prototyping approaches do not allow for the evolution of the prototype into a production system or support maintenance after the system is fielded. A set of goals is presented for a modern user interface environment and Serpent, a prototype implementation that achieves these goals, is described.

  9. Animal Symbols in the Art of the Hodensaunee.

    ERIC Educational Resources Information Center

    Hill, Richard

    1987-01-01

    Explains the significance of the main animal symbols incorporated into the social, cultural, artistic, and spiritual fabric of the Hodenosaunee (the People of the Longhouse) also known as the Six Nations Iroquois: the eagle, turtle, bear, wolf, hawk, heron, snipe, eel, deer, beaver, moose, snake, and serpent. (NEC)

  10. Applications of twin analysis to studying meteorite impact structures

    NASA Astrophysics Data System (ADS)

    Schedl, Andrew

    2006-04-01

    This paper describes a technique, twin analysis of dolomite and calcite, which was used to estimate the level of erosion of an impact crater. If the age of impact is known, the level of erosion gives the amount of sediments present at that time. The estimate of the level of erosion, and the presence or absence of tectonic strains in calcite constrains the age of impact. This technique might also be useful in identifying deeply eroded impact structures. Twin analysis gives the greatest shortening direction, ɛ1. Tilt corrected ɛ1 directions converge at or above the present day surface, if a shallow gas explosion or meteorite impact explains the structure, rather than a deep gas or cryptovolcanic explosion. The energy density recorded by twinning distinguishes an impact from a shallow gas explosion for structures ≤ 100 m diameter. At Serpent Mound, a well-established impact structure, ɛ1 directions converge at 1400 ± 390 m (95% confidence interval of the mean) above the present day structure and the sample closest to the center of the structure records an energy density of 1.7 × 10 7 J/m 3. These results are consistent with previous studies showing that Serpent Mound is an impact (e.g., [R.W. Carlton, C. Koeberl, M.T. Baranoski, G.A. Schumacker, Discovery of microscopic evidence for shock metamorphism at the Serpent Mound structure, south-central Ohio: confirmation of an origin by impact, Earth and Planet. Sci. Lett. 162 (1998) 177-185]). The level of erosion and other data suggests that Serpent Mound formed between 290 and 256 Ma and was originally 8.5 to 11 km in diameter. Dolomite twinning is not observed at Serpent Mound suggesting that this technique may only be useful for studying larger, more deeply eroded structures.

  11. Peptide T, a novel bradykinin potentiator isolated from Tityus serrulatus scorpion venom.

    PubMed

    Ferreira, L A; Alves, E W; Henriques, O B

    1993-08-01

    A bradykinin-potentiating peptide was isolated and characterized from venom of the scorpion Tityus serrulatus by chromatographic techniques followed by biological assays. The complete amino acid sequence (13 residues) of peptide is presented. The peptide potentiated the contractile activity of bradykinin on the isolated guinea-pig ileum, and inhibited the hydrolysis of bradykinin by angiotensin-converting enzyme from B. jararaca plasma and the conversion of angiotensin I to angiotensin II by kininase II from guinea-pig ileum tissue. The peptide also increased the depressor effect of bradykinin on arterial blood pressure in the anaesthetized rat. PMID:8212046

  12. Inhibition of Hemorragic Snake Venom Components: Old and New Approaches

    PubMed Central

    Panfoli, Isabella; Calzia, Daniela; Ravera, Silvia; Morelli, Alessandro

    2010-01-01

    Snake venoms are complex toxin mixtures. Viperidae and Crotalidae venoms, which are hemotoxic, are responsible for most of the envenomations around the world. Administration of antivenins aimed at the neutralization of toxins in humans is prone to potential risks. Neutralization of snake venom toxins has been achieved through different approaches: plant extracts have been utilized in etnomedicine. Direct electric current from low voltage showed neutralizing properties against venom phospholipase A2 and metalloproteases. This mini-review summarizes new achievements in venom key component inhibition. A deeper knowledge of alternative ways to inhibit venom toxins may provide supplemental treatments to serum therapy. PMID:22069593

  13. Distribution of low molecular weight platelet aggregation inhibitors from snake venoms.

    PubMed

    Oyama, Etsuko; Takahashi, Hidenobu

    2007-03-01

    An assay of platelet aggregation inhibitors measured by the turbidimeter using Aggregometer PAM 8C (Mebanix) was performed after each crude snake venom (57 species) was subjected to ultrafiltration using MILLIPORE UFP 1 LGC. The snake venoms of Viperidae (three species), Elapidae (11 species), and Hydrophiidae (two species) inhibited ADP-induced rabbit platelet aggregation. In particular, six venoms of Bitis gabonica, Pseudocerastes persicus, Dendroaspis angusticeps, D. polylepis, Ophiophagus hannah, and N. nigricollis crawshawii strongly inhibited platelet aggregation. Furthermore, adenosine was identified from Bitis gabonica venom using HPLC and FAB/MS analysis. PMID:17141819

  14. [Rod of Asclepius. Symbol of medicine].

    PubMed

    Young, Pablo; Finn, Bárbara C; Bruetman, Julio E; Cesaro Gelos, Jorge; Trimarchi, Hernán

    2013-09-01

    Symbolism is one of the most archaic forms of human thoughts. Symbol derives from the Latin word symbolum, and the latter from the Greek symbolon or symballo, which means "I coincide, I make matches". The Medicine symbol represents a whole series of historical and ethical values. Asclepius Rod with one serpent entwined, has traditionally been the symbol of scientific medicine. In a misconception that has lasted 500 years, the Caduceus of Hermes, entwined by two serpents and with two wings, has been considered the symbol of Medicine. However, the Caduceus is the current symbol of Commerce. Asclepius Rod and the Caduceus of Hermes represent two professions, Medicine and Commerce that, in ethical practice, should not be mixed. Physicians should be aware of their real emblem, its historical origin and meaning. PMID:24522424

  15. Extremely low nerve growth facior (NGF) activity of sea snake (Hydrophiidae) venoms.

    PubMed

    Mariam, Khafizova; Tu, Anthony T

    2002-12-01

    Sea snake venoms contain less protein than those of land snakes (Toom et al., 1969). Sea snake venoms lack arginine ester hydrolyzing activity, whereas those of Crotalidae and Viperidae have such activity (Tu et al., 1966). Sea snakes live in salty water, and their venoms may be different from those of land snakes. Because of the difficulty in obtaining sea snake venoms, information about sea snake venoms is quite incomplete. NGF is commonly present in the venoms of land snakes such as Elapidae, Viperidae, and Crotalidae (Cohen and Levi-Montalcini, 1956; Lipps, 2002). It is therefore of interest to investigate the presence or absence of NGF in sea snake venoms. In order to investigate the presence or absence of NGF, five sea snake venoms were selected. Lapemis hardwickii (Hardwick's sea snake) and Acalyptophis peronii venom were obtained from the Gulf of Thailand. Hydrophis cyanocinctus (common sea snake) and Enhydrina schistosa (beaked sea snake) venom were obtained from the Strait of Malacca. Laticauda semifasciata (broad band blue sea snake) venom was also examined and the venom was obtained from Gato Island in the Philippines. PMID:12503884

  16. [Role of antivenoms in the treatment of snake envenomation].

    PubMed

    Chippaux, Jean-Philippe

    2013-01-01

    The production of antivenoms, which were long deemed ineffective, dangerous and difficult to use, has improved dramatically. These antibodies (immunoglobulin G) are now fragmented, purified and controlled for their quality, leading to significantly better safety and facilitating their emergency use. Envenomation can result in various syndromes depending on the snake species: Viperidae venoms are highly inflammatory, hemorrhagic and necrotising, while Elapidae venoms can cause fatal respiratory paralysis. However, some Viperidae venoms can lead to asphyxiation similar to that observed in Elapidae envenomation while, conversely, Elapidae bites may be complicated by hemorrhage or necrosis, thus complicating etiologic diagnosis. Symptomatic treatment is complex, often insufficient, and frequently associated with adverse events. In contrast, antivenoms neutralize the venom and accelerate its clearance, thus providing an etiological treatment for envenomation, particularly in remote healthcare facilities in developing countries. Current formulations consist of polyvalent antivenoms covering most of the venomous species present in a specific region. The main limitation is their high cost, and the priority should be to develop new treatment strategies, including more affordable antivenoms, especially in developing countries where they are most needed. PMID:25518165

  17. Behavioral Plasticity and the Origins of Novelty: The Evolution of the Rattlesnake Rattle.

    PubMed

    Allf, Bradley C; Durst, Paul A P; Pfennig, David W

    2016-10-01

    Environmentally induced behavior (behavioral plasticity) has long been hypothesized to promote the origins of novel morphological traits, but this idea remains controversial. One context in which this hypothesis can be evaluated is animal communication, where behavior and morphology are often linked. Here, we examined the evolution of one of nature's most spectacular communication signals: the rattlesnake rattle. We specifically evaluated whether rattlesnake rattling behavior-and, hence, the rattle-originated from a simple behavior: vibrating the tail when threatened. By reconstructing the ancestral state of defensive tail vibration, we show that this behavior is nearly ubiquitous in the Viperidae (the family that includes rattlesnakes) and widespread in the Colubridae (the largest snake family, nearly all of which are nonvenomous), suggesting a shared origin for the behavior between these families. After measuring tail vibration in 56 species of Viperidae and Colubridae, we show that the more closely related a species was to rattlesnakes, the more similar it was to rattlesnakes in duration and rate of tail vibration. Thus, the rattlesnake rattle might have evolved via elaboration of a simple behavior. These data thereby support the long-standing hypothesis that behavioral plasticity often precedes-and possibly instigates-the evolution of morphological novelty. PMID:27622880

  18. Viper metalloproteinase (Agkistrodon halys pallas) with antimicrobial activity against multi-drug resistant human pathogens.

    PubMed

    Samy, Ramar Perumal; Gopalakrishnakone, Ponnampalam; Chow, Vincent T K; Ho, Bow

    2008-07-01

    Metalloproteinases are abundant enzymes in crotalidae and viperidae snake venoms. Snake venom metalloproteinases (SVMPs) comprise a family of zinc-dependent enzymes, which display many different biological activities. A 23.1 kDa protein was isolated from Agkistrodon halys (pallas, Chinese viper) snake venom. The toxin is a single chain polypeptide with a molecular weight of 23146.61 and an N-terminal sequence (MIQVLLVTICLAVFPYQGSSIILES) relatively similar to that of other metalloprotein-like proteases isolated from the snake venoms of the Viperidae family. The antibacterial effect of Agkistrodon halys metalloproteinase (AHM) on Burkholderia pseudomallei (strains TES and KHW), Escherichia coli, Enterobacter aerogenes, Proteus vulgaris, Proteus mirabilis, Pseudomonas aeruginosa (Gram-negative bacteria) and Staphylococcus aureus (Gram-positive bacterium) was studied at a concentration 120 microM. Interestingly, we found that the metalloproteinase exhibited antibacterial properties and was more active against S. aureus, P. vulgaris, P. mirabilis and multi-drug resistant B. pseudomallei (strain KHW) bacteria. AHM variants with high bacteriostatic activity (MIC 1.875-60 microM) also tended to be less cytotoxic against U-937 human monocytic cells up to 1 mM concentrations. These results suggest that this metalloprotein exerts its antimicrobial effect by altering membrane packing and inhibiting mechanosensitive targets. PMID:18297685

  19. Finite-difference, time-domain analysis of a folded acoustic transmission line.

    PubMed

    Jackson, Charles M

    2005-03-01

    Recently designed, modern versions of renais sance woodwind instruments such as the recorder and serpent use square cross sections and a folded acoustic transmission line. Conventional microwave techniques would expect that this bend would cause unwanted reflections and impedance discontinuities. This paper analyses the folded acoustic transmission line using finite-difference, time-domain techniques and shows that the discontinuity can be compensated with by the use of a manufacturable method. PMID:15857045

  20. Ophiuchus

    NASA Astrophysics Data System (ADS)

    Murdin, P.

    2000-11-01

    (the Serpent-bearer; abbrev. Oph, gen. Ophiuchi; area 948 sq. deg.) An equatorial constellation which lies between Hercules and Scorpius, and culminates at midnight in mid-June. The ecliptic cuts across the southern part of Ophiuchus, but the constellation is not included among the constellations of the zodiac. Ophiuchus is usually said to represent Asclepius, the Greek god of medicine, and is sh...

  1. Five in situ observations of live oarfish Regalecus glesne (Regalecidae) by remotely operated vehicles in the oceanic waters of the northern Gulf of Mexico.

    PubMed

    Benfield, M C; Cook, S; Sharuga, S; Valentine, M M

    2013-07-01

    As part of the SERPENT Project, five observations of apparently healthy oarfish Regalecus glesne by remotely operated vehicles are reported from the northern Gulf of Mexico. Regalecus glesne were observed between 2008 and 2011 at depths from within the epipelagic and mesopelagic zones. These observations include the deepest verified record of R. glesne (463-492 m) and the first record of an arthropod ectoparasite (isopod). PMID:23808690

  2. Computation of a Canadian SCWR unit cell with deterministic and Monte Carlo codes

    SciTech Connect

    Harrisson, G.; Marleau, G.

    2012-07-01

    The Canadian SCWR has the potential to achieve the goals that the generation IV nuclear reactors must meet. As part of the optimization process for this design concept, lattice cell calculations are routinely performed using deterministic codes. In this study, the first step (self-shielding treatment) of the computation scheme developed with the deterministic code DRAGON for the Canadian SCWR has been validated. Some options available in the module responsible for the resonance self-shielding calculation in DRAGON 3.06 and different microscopic cross section libraries based on the ENDF/B-VII.0 evaluated nuclear data file have been tested and compared to a reference calculation performed with the Monte Carlo code SERPENT under the same conditions. Compared to SERPENT, DRAGON underestimates the infinite multiplication factor in all cases. In general, the original Stammler model with the Livolant-Jeanpierre approximations are the most appropriate self-shielding options to use in this case of study. In addition, the 89 groups WIMS-AECL library for slight enriched uranium and the 172 groups WLUP library for a mixture of plutonium and thorium give the most consistent results with those of SERPENT. (authors)

  3. Snake venom galactoside-binding lectins: a structural and functional overview.

    PubMed

    Sartim, Marco A; Sampaio, Suely V

    2015-01-01

    Snake venom galactoside-binding lectins (SVgalLs) comprise a class of toxins capable of recognizing and interacting with terminal galactoside residues of glycans. In the past 35 years, since the first report on the purification of thrombolectin from Bothrops atrox snake venom, several SVgalLs from Viperidae and Elapidae snake families have been described, as has progressive improvement in the investigation of structural/functional aspects of these lectins. Moreover, the advances of techniques applied in protein-carbohydrate recognition have provided important approaches in order to screen for possible biological targets. The present review describes the efforts over the past 35 years to elucidate SVgalLs, highlighting their structure and carbohydrate recognition function involved in envenomation pathophysiology and potential biomedical applications. PMID:26413085

  4. Biochemical Characterization, Action on Macrophages, and Superoxide Anion Production of Four Basic Phospholipases A2 from Panamanian Bothrops asper Snake Venom

    PubMed Central

    Rueda, Aristides Quintero; Rodríguez, Isela González; Arantes, Eliane C.; Setúbal, Sulamita S.; Calderon, Leonardo de A.; Zuliani, Juliana P.; Stábeli, Rodrigo G.; Soares, Andreimar M.

    2013-01-01

    Bothrops asper (Squamata: Viperidae) is the most important venomous snake in Central America, being responsible for the majority of snakebite accidents. Four basic PLA2s (pMTX-I to -IV) were purified from crude venom by a single-step chromatography using a CM-Sepharose ion-exchange column (1.5 × 15 cm). Analysis of the N-terminal sequence demonstrated that pMTX-I and III belong to the catalytically active Asp49 phospholipase A2 subclass, whereas pMTX-II and IV belong to the enzymatically inactive Lys49 PLA2s-like subclass. The PLA2s isolated from Panama Bothrops asper venom (pMTX-I, II, III, and IV) are able to induce myotoxic activity, inflammatory reaction mainly leukocyte migration to the muscle, and induce J774A.1 macrophages activation to start phagocytic activity and superoxide production. PMID:23509779

  5. Venomous bites and stings in the tropical world.

    PubMed

    Warrell, D A

    Snakes of the families Viperidae and Elapidae are responsible for the high incidence of morbidity and mortality after snake bites in countries of West Africa, the Indian subcontinent, South-East Asia, New Guinea and Latin America. Envenoming can cause local effects, notably tissue necrosis; and systemic effects, including paralysis, haemostatic disturbances, shock, increased capillary permeability, myocardial damage, rhabdomyolysis and acute renal failure. Specific hyperimmune serum (antivenom) is the mainstay of medical treatment for severe envenoming. Ancillary treatments such as assisted ventilation, repletion of circulating volume, renal dialysis and surgical debridement of necrotic tissues are needed in some cases. Scorpion stings are a common medical problem in middle and southern America, North Africa and the Middle East. Vasodilator drugs are important to counter the effects of massive catecholamine release. Bites by spiders and stings by hymenoptera and marine animals are responsible for deaths and morbidity in some tropical countries. PMID:8264466

  6. High-level expression, purification, characterization and structural prediction of a snake venom metalloproteinase inhibitor in Pichia pastoris.

    PubMed

    Shi, Yi; Ji, Ming-Kai; Xu, Jian-Wen; Lin, Xu; Lin, Jian-Yin

    2012-03-01

    Snake venom metalloproteinase inhibitor BJ46a is from the serum of the venomous snake Bothrops jararaca. It has been proven to possess the capacity to inhibit matrix metalloproteinases (MMPs), likely based on its structural similarity to MMPs. This report describes the successful expression, purification, and characterization of the recombinant protein BJ46a in Pichia pastoris. Purified recombinant protein BJ46a was found to inhibit MMPs. Structural modeling was completed and should provide the foundation for further functional research. To our knowledge, this is the first report on the large scale expression of BJ46a, and it provides promise as a method for generation of BJ46a and investigation of its potential use as a new drug for treatment of antitumor invasion and metastasis. PMID:22307654

  7. Snakebite envenomation and death in the developing world.

    PubMed

    Cruz, Luzia S; Vargas, Roberto; Lopes, Antônio Alberto

    2009-01-01

    The purpose of this review is to address the global incidence and management of snakebite envenomation and to describe the clinical characteristics and pathogenesis of envenomation by species of the family Viperidae, genera Bothrops and Crotalus, the most common venomous snakes in Brazil. We focus on the pathogenesis of the acute renal failure induced by these snakes. Envenomation after snakebite is an underestimated and neglected public health issue responsible for substantial illness and death as well as socioeconomic hardship to impoverished populations living in rural and tropical Africa, Asia, Oceania, and Latin America. In developed nations, snake bite typically occurs during recreational activities, whereas in developing countries it is an occupational disease more likely to affect young agricultural workers, predominantly men. Scarcity and delay of administration of antivenom, poor health services, and difficulties with transportation from rural areas to health centers are major factors that contribute to the high case-fatality ratio of snakebite envenomation. PMID:19484874

  8. The proteolytic action of Arvin on human fibrinogen

    PubMed Central

    Ewart, M. R.; Hatton, M. W. C.; Basford, J. M.; Dodgson, K. S.

    1970-01-01

    1. Human fibrinogen was subjected to proteolysis by enzyme preparations (clinical Arvin and IRC-50 Arvin) from the venom of Agkistrodon rhodostoma. 2. IRC-50 Arvin releases three peptides from fibrinogen, and these were identified as fibrinopeptides AP, AY and A. 3. The less purified `clinical' Arvin releases, in addition to fibrinopeptides AP, AY and A, small amounts of two heptapeptides derived from fibrinopeptides AP and A, probably because it contains another enzyme as well as Arvin. 4. No fibrinopeptide B is released by either Arvin preparation. 5. Thus, although Arvin is known to differ from `reptilase' from Bothrops jararaca in that it does not activate the enzyme that cross-links fibrin (fibrin-stabilizing factor), it is identical with reptilase with respect to the peptides that it liberates from fibrinogen. PMID:5529716

  9. Novel pharmaceutical composition of bradykinin potentiating penta peptide with beta-cyclodextrin: physical-chemical characterization and anti-hypertensive evaluation.

    PubMed

    Denadai, Angelo M L; Ianzer, Danielle; Alcântara, Antônio Flávio de C; Santoro, Marcelo M; Santos, Cynthia F F; Lula, Ivana Silva; de Camargo, Antônio C M; Faljoni-Alario, Adelaide; dos Santos, Robson A S; Sinisterra, Rubén D

    2007-05-01

    This work describes chemical properties and anti-hypertensive activity of an oral pharmaceutical formulation obtained from the complexation of beta-cyclodextrin (beta-CD) with bradykinin potentiating penta peptide (BPP-5a) founded in the Bothrops jararaca poison. Physical chemistry characterizations were recorded in order to investigate the intermolecular interactions between species in complex. Circular dichroism data indicated conformational changes of BPP-5a upon complexation with beta-CD. ROESY and theoretical calculations showed a selective approximation of triptophan moiety into cavity of beta-CD. Isothermal titration calorimetry data indicated an exothermic formation of the complex, which is accomplished by reduction of entropy. The anti-hypertensive activity of the BPP-5a/beta-CD complex has been evaluated in spontaneous hypertensive rats, showing better results than pure BPP-5a. PMID:17196774

  10. Current challenges for confronting the public health problem of snakebite envenoming in Central America.

    PubMed

    Gutiérrez, José María

    2014-01-01

    Snakebite envenoming is a serious public health problem in Central America, where approximately 5,500 cases occur every year. Panama has the highest incidence and El Salvador the lowest. The majority, and most severe, cases are inflicted by the pit viper Bothrops asper (family Viperidae), locally known as 'terciopelo', 'barba amarilla' or 'equis'. About 1% of the bites are caused by coral snakes of the genus Micrurus (family Elapidae). Despite significant and successful efforts in Central America regarding snakebite envenomings in the areas of research, antivenom manufacture and quality control, training of health professionals in the diagnosis and clinical management of bites, and prevention of snakebites, much remains to be done in order to further reduce the impact of this medical condition. This essay presents seven challenges for improving the confrontation of snakebite envenoming in Central America. Overcoming these challenges demands a coordinated partnership of highly diverse stakeholders though inter-sectorial and inter-programmatic interventions. PMID:24602234

  11. Histology of the Skin of Three Limbless Squamates Dwelling in Mesic and Arid Environments.

    PubMed

    Allam, Ahmed A; Daza, Juan D; Abo-Eleneen, Rasha E

    2016-07-01

    The skin of limbless squamates has an increased contact with the substrate compared with limbed counterparts. Comparatively, the contact with the substrate is intensified in fossorial species, where the whole circumference of the body interacts with the soil during underground locomotion. Although fossoriality in Squamata, specifically lizards and snakes, has been studied ecologically and morphologically (e.g., osteological changes), not enough detail is yet available regarding changes in organs critical for underground lifestyle such as the skin. Here we used histological and microscopical techniques (scanning electron microscopy and transmission electron microscopy) to uncover the structural detail of the epidermis and dermis in three limbless reptiles, the amphisbaenian Diplometopon zarudnyi, and two snakes, Indotyphlops braminus (Typhlopidae) and Cerastes cerastes (Viperidae). The skin of these taxa shows pronounced morphological diversity, which is likely associated to different environmental and functional demands upon these reptiles. Anat Rec, 299:979-989, 2016. © 2016 Wiley Periodicals, Inc. PMID:27111253

  12. Venomous snakebite in Thailand. I: Medically important snakes.

    PubMed

    Chanhome, L; Cox, M J; Wilde, H; Jintakoon, P; Chaiyabutr, N; Sitprija, V

    1998-05-01

    Thailand has an abundance of venomous snakes. Among the neurotoxic family Elapidae, there are three species of the genus Naja (cobras), three of the genus Bungarus (kraits), and the king cobra of the genus Ophiophagus. Other Elapidae snakes in Thailand include sea snakes and Asian coral snakes of the genus Calliophis. They have potent venoms but rarely bite humans. Tissue and hemotoxic snakes are represented by family Viperidae, subfamilies Viperinae and Crotalinae. They remain an occupational hazard for farmers and rubber tappers, causing serious morbidity but only rare deaths, since competent treatment is now widely available throughout Thailand. Purified equine antivenin is manufactured locally for the monocled and Siamese spitting cobras (Naja kaouthia and N. siamensis), king cobra (Ophiophagus hannah), banded krait (Bungarus fasciatus), most green pit vipers (Trimeresurus sp.), Malayan pit viper (Calloselasma rhodostoma), and the Siamese Russell's viper (Daboia russelli siamensis). PMID:9597848

  13. Inhibition of lung tumor colonization and cell migration with the disintegrin crotatroxin 2 isolated from the venom of Crotalus atrox.

    PubMed

    Galán, Jacob A; Sánchez, Elda E; Rodríguez-Acosta, Alexis; Soto, Julio G; Bashir, Sajid; McLane, Mary Ann; Paquette-Straub, Carrie; Pérez, John C

    2008-06-01

    Disintegrins are low molecular weight proteins (4-15 kDa) with an RGD binding region at their binding loop. Disintegrin and disintegrin-like proteins are found in the venom of four families of snakes: Atractaspididae, Elapidae, Viperidae, and Colubridae. This report describes the biological activity of a disintegrin, crotatroxin 2, isolated by a three-step chromatography procedure from the venom of the Western diamondback rattlesnake (Crotalus atrox). The intact molecular mass for crotatroxin 2 was 7.384 kDa and 71 amino acids. Crotatroxin 2 inhibited human whole blood platelet aggregation with an IC(50) of 17.5 nM, inhibited cell (66.3p) migration by 63%, and inhibited experimental lung tumor colonization in BALB/c mice at 1000 microg/kg. Our data suggest that while crotatroxin 2 inhibits platelet aggregation, cancer cell migration, and lung tumor colonization, it is done via different integrins. PMID:18387648

  14. Hematopoiesis in snakes (Ophidia).

    PubMed

    Dabrowski, Z; Tabarowski, Z; Sano-Martins, I S; Spadacci-Morena, D D; Witkowska-Pelc, E; Krzysztofowicz, E; Spodaryk, K

    2002-01-01

    Locations of the hematopoietic tissue have been described in the following ophidian species: Bothrops jararaca, Bothrops jararacusu, Waglerophis merremii, Elaphe teniura teniura, Boa constrictor, and Python reticulatus. Studies were carried out on perfusion fixed vertebrae, ribs, spleen, liver, thymus, and kidney. Routine histological technique was applied using both light and electron microscopy. Hematopoietic tissue was found in the following locations of the vertebrae: neural spine, neural arch, postzygophysis processes, hypapophysis, vertebral centre. Moreover, intense hematopoiesis was found inside the ribs. In the spleen and thymus, only lymphopoiesis was found. Hematopoietic islets in the spleen were sporadically found only in young specimens. No hematopoiesis was observed in the liver and kidney. In the studied species, there were no differences in the location of hematopoietic tissue. A new model of mature and immature blood cell release to the lumen of marrow sinuses different from that known to operate in higher vertebrates is proposed. PMID:12056654

  15. Biochemical characterization, action on macrophages, and superoxide anion production of four basic phospholipases A2 from Panamanian Bothrops asper snake venom.

    PubMed

    Rueda, Aristides Quintero; Rodríguez, Isela González; Arantes, Eliane C; Setúbal, Sulamita S; Calderon, Leonardo de A; Zuliani, Juliana P; Stábeli, Rodrigo G; Soares, Andreimar M

    2013-01-01

    Bothrops asper (Squamata: Viperidae) is the most important venomous snake in Central America, being responsible for the majority of snakebite accidents. Four basic PLA2s (pMTX-I to -IV) were purified from crude venom by a single-step chromatography using a CM-Sepharose ion-exchange column (1.5 × 15 cm). Analysis of the N-terminal sequence demonstrated that pMTX-I and III belong to the catalytically active Asp49 phospholipase A2 subclass, whereas pMTX-II and IV belong to the enzymatically inactive Lys49 PLA2s-like subclass. The PLA2s isolated from Panama Bothrops asper venom (pMTX-I, II, III, and IV) are able to induce myotoxic activity, inflammatory reaction mainly leukocyte migration to the muscle, and induce J774A.1 macrophages activation to start phagocytic activity and superoxide production. PMID:23509779

  16. [A survey on the venomous snakes of the vicinity of Kindia (Guinea) and considerations on the treatment of snakebite].

    PubMed

    Baldé, M C; Mané, Y; Trape, J F

    2009-02-01

    Between June and December 2004, snake collections were undertaken in eight villages of the vicinity of Kindia, an area of Guinea Conakry where the incidence of snakebite is among the highest reported in the world. A total of 916 specimens were collected, including 90 Elapidae (9.8 %) and 174 Viperidae (19.0%). The Black Mamba Dendroaspis polylepis was represented by eight specimens, i.e. almost 1% of the snakes collected. This species, which is considered as very rare in West Africa, appears common in this area of Guinea. The current difficulties for the treatment of snakebite due to the high increase of the cost of antivenom therapy are discussed. PMID:19499730

  17. Wide distribution of cysteine-rich secretory proteins in snake venoms: isolation and cloning of novel snake venom cysteine-rich secretory proteins.

    PubMed

    Yamazaki, Yasuo; Hyodo, Fumiko; Morita, Takashi

    2003-04-01

    Cysteine-rich secretory proteins (CRISPs) are found in epididymis and granules of mammals, and they are thought to function in sperm maturation and in the immune system. Recently, we isolated and obtained clones for novel snake venom proteins that are classified as CRISP family proteins. To elucidate the distribution of snake venom CRISP family proteins, we evaluated a wide range of venoms for immuno-cross-reactivity. Then we isolated, characterized, and cloned genes for three novel CRISP family proteins (piscivorin, ophanin, and catrin) from the venom of eastern cottonmouth (Agkistrodon piscivorus piscivorus), king cobra (Ophiophagus hannah), and western diamondback rattlesnake (Crotalus atrox). Our results show the wide distribution of snake venom CRISP family proteins among Viperidae and Elapidae from different continents, indicating that CRISP family proteins compose a new group of snake venom proteins. PMID:12646276

  18. Software system for three-dimensional volumetric reconstruction of histological sections: a case study for the snake chondrocranium.

    PubMed

    Hofstadler-Deiques, Clarice; Walter, Marcelo; Mierlo, Fábio; Ruduit, Rodrigo

    2005-10-01

    Volumetric digital computer-assisted reconstruction of histological sections is an attractive possibility for developmental studies. Commercial solutions are very expensive for many educational institutions. Therefore, we developed a software system for three-dimensional reconstruction of anatomical virtual models. The input data for the system are the digitized images from the histological samples of the chondrocranium of two crotalines, Bothrops jararaca and Crotalus durissus terrificus, and one colubrid, Philodryas olfersii, using a stereomicroscope connected to a digital camera. These images are then manually registered and segmented. We use computer graphics visualization algorithms such as marching cubes and ray casting to generate three-dimensional visualizations of the volumes. The results show that the digital reconstruction is as good as the manual reconstruction with the advantages of speed of reconstruction, accuracy, and flexibility to handle and study the volume. Compared with commercial options, our system has approximately the same features, and it is available free for the scientific community. PMID:16114067

  19. Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation

    PubMed Central

    Zektser, Yulia; Mahajan, Shivani; Bachtrog, Doris

    2013-01-01

    Snakes exhibit genetic sex determination, with female heterogametic sex chromosomes (ZZ males, ZW females). Extensive cytogenetic work has suggested that the level of sex chromosome heteromorphism varies among species, with Boidae having entirely homomorphic sex chromosomes, Viperidae having completely heteromorphic sex chromosomes, and Colubridae showing partial differentiation. Here, we take a genomic approach to compare sex chromosome differentiation in these three snake families. We identify homomorphic sex chromosomes in boas (Boidae), but completely heteromorphic sex chromosomes in both garter snakes (Colubridae) and pygmy rattlesnake (Viperidae). Detection of W-linked gametologs enables us to establish the presence of evolutionary strata on garter and pygmy rattlesnake sex chromosomes where recombination was abolished at different time points. Sequence analysis shows that all strata are shared between pygmy rattlesnake and garter snake, i.e., recombination was abolished between the sex chromosomes before the two lineages diverged. The sex-biased transmission of the Z and its hemizygosity in females can impact patterns of molecular evolution, and we show that rates of evolution for Z-linked genes are increased relative to their pseudoautosomal homologs, both at synonymous and amino acid sites (even after controlling for mutational biases). This demonstrates that mutation rates are male-biased in snakes (male-driven evolution), but also supports faster-Z evolution due to differential selective effects on the Z. Finally, we perform a transcriptome analysis in boa and pygmy rattlesnake to establish baseline levels of sex-biased expression in homomorphic sex chromosomes, and show that heteromorphic ZW chromosomes in rattlesnakes lack chromosome-wide dosage compensation. Our study provides the first full scale overview of the evolution of snake sex chromosomes at the genomic level, thus greatly expanding our knowledge of reptilian and vertebrate sex chromosomes

  20. Preliminary Analysis of the Transient Reactor Test Facility (TREAT) with PROTEUS

    SciTech Connect

    Connaway, H. M.; Lee, C. H.

    2015-11-30

    The neutron transport code PROTEUS has been used to perform preliminary simulations of the Transient Reactor Test Facility (TREAT). TREAT is an experimental reactor designed for the testing of nuclear fuels and other materials under transient conditions. It operated from 1959 to 1994, when it was placed on non-operational standby. The restart of TREAT to support the U.S. Department of Energy’s resumption of transient testing is currently underway. Both single assembly and assembly-homogenized full core models have been evaluated. Simulations were performed using a historic set of WIMS-ANL-generated cross-sections as well as a new set of Serpent-generated cross-sections. To support this work, further analyses were also performed using additional codes in order to investigate particular aspects of TREAT modeling. DIF3D and the Monte-Carlo codes MCNP and Serpent were utilized in these studies. MCNP and Serpent were used to evaluate the effect of geometry homogenization on the simulation results and to support code-to-code comparisons. New meshes for the PROTEUS simulations were created using the CUBIT toolkit, with additional meshes generated via conversion of selected DIF3D models to support code-to-code verifications. All current analyses have focused on code-to-code verifications, with additional verification and validation studies planned. The analysis of TREAT with PROTEUS-SN is an ongoing project. This report documents the studies that have been performed thus far, and highlights key challenges to address in future work.

  1. Astronomy at Teotihuacan

    NASA Astrophysics Data System (ADS)

    Iwaniszewski, Stanisław

    Located 37 km from Mexico City, during the first part of the first millennium AD, Teotihuacan was one of the world's largest and most populated cities. The city controlled the obsidian mines and developed far-reaching economic and political interactions, especially with the Classic Maya dynasties, Monte Albán in the Valley of Oaxaca and the Mexican Gulf Coast. Teotihuacan-made pottery and jewelry along with talud-tablero architectural style and the cult of the Feathered Serpent and Rain gods was spread throughout Mesoamerica.

  2. Spectroscopy of Moses Rock Kimberlite Diatreme

    NASA Technical Reports Server (NTRS)

    Pieters, C. M.; Mustard, J. F.

    1985-01-01

    Three types of remote sensing data (Airborne Imaging Spectroscopy (AIS), NS001, Zeiss IR-photographs) were obtained for the Moses Rock kimberlite dike in southern Utah. The goal is to identify and characterize the mantle derived mafic component in such volcanic features. The Zeiss and NS001 images provide information on the regional setting and allow units of the dike to be distinguished from surrounding material. A potential unmapped satellite dike was identified. The AIS data provide characterizing information of the surface composition of the dike. Serpentized olivine-bearing soils are (tentatively) identified from the AIS spectra for a few areas within the dike.

  3. Spatial and spectral effects in subcritical system pulsed experiments

    SciTech Connect

    Dulla, S.; Nervo, M.; Ravetto, P.; Carta, M.

    2013-07-01

    Accurate neutronic models are needed for the interpretation of pulsed experiments in subcritical systems. In this work, the extent of spatial and spectral effects in the pulse propagation phenomena is investigated and the analysis is applied to the GUINEVERE experiment. The multigroup cross section data is generated by the Monte Carlo SERPENT code and the neutronic evolution following the source pulse is simulated by a kinetic diffusion code. The results presented show that important spatial and spectral aspects need to be properly accounted for and that a detailed energy approach may be needed to adequately capture the physical features of the system to the pulse injection. (authors)

  4. Geobotanical techniques for discriminating serpentine rock types in Western United States

    NASA Technical Reports Server (NTRS)

    Mouat, D.; Elvidge, C.; Lyon, R.

    1982-01-01

    The effectiveness of airborne multispectral imagery for identifying vegetation indicative of serpentine soils, which usually contain deposits of Ni, Cr, and Co, was examined with ground truth data. Analyses were carried out in SW Oregon, the Jasper Ridge of the Santa Cruz Mountains, and the Sierra Nevada foothills. Airborne studies were performed with 10-channel scanner, a IR scanner, and with false color composites, while ground studies classified the vegetation and mineral contents of the soil. The airborne studies were successfully used to discern serpentine soils from nonultramafic rock types, although difficulties were encountered in separating serpentine from nonserpentinized peridotite. A lack of deciduous trees on serpentized land was noted.

  5. Diving Down in Partnership - Technology assists science outreach

    NASA Astrophysics Data System (ADS)

    Marshall-Brown, K.

    2009-04-01

    Advances in underwater technology are revealing a world hitherto unseen - the deep ocean. Advances in web technology are enabling scientists to share their discoveries with the world. Underwater robot cameras are allowing scientists to observe animal behaviour and study habitats at depths of 6000 metres. And the Internet is providing a window on this exotic world for everyone with access to the web. The UK's National Oceanography Centre, Southampton operates Isis, a scientific deep-diving remotely-operated vehicle (ROV). The results are phenomenal, producing footage of life in the abyss and the ability to take samples and conduct experiments on the ocean floor. The Centre also hosts a novel project making use of the robot cameras used in the oil and gas industry for maintenance and exploration. Scientists are using this equipment during stand-by time to study animals in their own habitat. The SERPENT project - Scientific and Environmental ROV Partnership using Existing industrial Technology - is an international collaboration with industry, academia and museums. The SERPENT website is updated with the latest information and images attracting some 2000 visitors a month, which is set to rise with recent web developments. A vital part of the Centre's role is communication with the public to increase awareness of the marine environment. Images are essential for outreach especially as audiences continue to seek pictures from remote and inaccessible locations. This talk will explore how TV and the Internet are changing science outreach and the new challenges that it brings.

  6. Polyarnye siyaniya sistemy avroral'nogo ovala kak kosmoloficheskij obraz drevnej mifologii %t The northern light of the auroral oval system as a cosmological concept of the archaic mythology

    NASA Astrophysics Data System (ADS)

    Alekseeva, L. M.

    Since archaic epochs people attentively observe the sky. They used to associate the sky phenomena with gods, heroes, spirits, etc. People interpreted the regularities in the motion of celestial objects in terms of their mythological model of the Universe. These observations and interpretations were first steps of the archaeoastronomy. Many remarkable features are inherent in the patterns of northern lights of the auroral oval system. Their manifestations are fairly regular. Did the ancients observe and some how classify these northern light phenomena? If yes, with which mythological personages were they associated? When were studies of the polar lights initiated? The present work is an attempt to answer these questions. We shall see that the ancient people assumed the spirit-world to be situated on the North. If so, it should manifest itself in spectacular polar aurorae. The specifically northern mythic cosmology formed the basis for Slavic fairy tales (theme of the Serpent and Serpent Fighter) and folk-beliefs. Other inhabitants of snowy latitudes should also manifest similar views. Studying the mythological reflections of typical auroral phenomena, it is possible to trace up long-standing ideological trends from the late glaciation epoch to the present time. Our results can help geophysicists in studying paleoauroral phenomena.

  7. Mars Hand Lens Imager (MAHLI) Efforts and Observations at the Rocknest Eolian Sand Shadow in Curiosity's Gale Crater Field Site

    NASA Technical Reports Server (NTRS)

    Edgett, K. S.; Yingst, R. A.; Minitti, M. E.; Goetz, W.; Kah, L. C.; Kennedy, M. R.; Lipkaman, L. J.; Jensen, E. H.; Anderson, R. C.; Beegle, L. W.; Carsten, J. L.; Cooper, B.; Deen, R. G.; Dromart, G.; Eigenbrode, J. L.; Grotzinger, J. P.; Gupta, S.; Hamilton, V. E.; Hardgrove, C. J.; Harker, D. E.; Herkenhoff, K. E.; Herrera, P. N.; Hurowitz, J. A.; Jandura, L.; Ming, D. W.

    2013-01-01

    The Mars Science Laboratory (MSL) mission is focused on assessing the past or present habitability of Mars, through interrogation of environment and environmental records at the Curiosity rover field site in Gale crater. The MSL team has two methods available to collect, process and deliver samples to onboard analytical laboratories, the Chemistry and Mineralogy instrument (CheMin) and the Sample Analysis at Mars (SAM) instrument suite. One approach obtains samples by drilling into a rock, the other uses a scoop to collect loose regolith fines. Scooping was planned to be first method performed on Mars because materials could be readily scooped multiple times and used to remove any remaining, minute terrestrial contaminants from the sample processing system, the Collection and Handling for In-Situ Martian Rock Analysis (CHIMRA). Because of this cleaning effort, the ideal first material to be scooped would consist of fine to very fine sand, like the interior of the Serpent Dune studied by the Mars Exploration Rover (MER) Spirit team in 2004 [1]. The MSL team selected a linear eolian deposit in the lee of a group of cobbles they named Rocknest (Fig. 1) as likely to be similar to Serpent Dune. Following the definitions in Chapter 13 of Bagnold [2], the deposit is termed a sand shadow. The scooping campaign occurred over approximately 6 weeks in October and November 2012. To support these activities, the Mars Hand Lens Imager (MAHLI) acquired images for engineering support/assessment and scientific inquiry.

  8. Explicit temperature treatment in Monte Carlo neutron tracking routines - First results

    SciTech Connect

    Tuomas, V.; Jaakko, L.

    2012-07-01

    This article discusses the preliminary implementation of the new explicit temperature treatment method to the development version Monte Carlo reactor physics code Serpent 2 and presents the first practical results calculated using the method. The explicit temperature treatment method, as introduced in [1], is a stochastic method for taking the effect of thermal motion into account on-the-fly in a Monte Carlo neutron transport calculation. The method is based on explicit treatment of the motion of target nuclei at collision sites and requires cross sections at 0 K temperature only, regardless of the number of temperatures in the problem geometry. The method includes a novel capability of modelling continuous temperature distributions. Test calculations are performed for two test cases, a PWR pin-cell and a HTGR system. The resulting k{sub eff} and flux spectra are compared to a reference solution calculated using Serpent 1.1.16 with Doppler-broadening rejection correction [2]. The results are in very good agreement with the reference and also the increase in calculation time due to the new method is on acceptable level although not fully insignificant. On the basis of the current study, the explicit treatment method can be considered feasible for practical calculations. (authors)

  9. Is Continuing Contumely Relative to Mc Leod's Vision and ``Secret Sacred Science, (SSS),'': Contagiously Counterproductive in Science, or an Unhealthy Artifact of ``Turf Wars''?

    NASA Astrophysics Data System (ADS)

    Leod, Roger

    2007-04-01

    Mc Leod confirmed, with physics, his models for vision, and for electromagnetic artifacts, by traditional methods, associated with phenomena like tornados, hurricanes, and earthquakes. The latter confirmations are evidently apparent across current ethnology, cultures, linguistics, religion, rituals, exotic astronomy, somewhat concealed evidence of native record-keeping/writing, and iconography. Use of cultural anthropology while observing a modern Peruvian sacred-site-sweeping at Cuzco, coupled with their assertion that Ñari Huallac means ``serpent God,'' plus electromagnet information, reveals that their religious world-view include(s)(d) applied science that is still otherwise unacknowledged. Alexander Thom's precise megalithic site-measurements also imply that ``The Ancients' Serpent'' made/makes precise tracks that convey valuable information. The linguistics of words like Seminole, and unusual visual effects, reveal some traditionalists have done better than most scientists, for vision, and observational physics, and earth science. Tornado and hurricane tracks are predictable, as are some earthquakes. Tornado ``detuning'' or shutdown is electromagnetically possible. To cite this abstract, use the following reference: http://meetings.aps.org/link/BAPS.2007.NES07.C2.7

  10. Ophidascaris wangi sp. n. and O. najae (Gedoelst, 1916) (Ascaridida: Ascaridoidea) from snakes in China.

    PubMed

    Li, Liang; Guo, Yan-Ning; Li, Jian; Zhang, Lu-Ping

    2014-12-01

    Ophidascaris wangi sp. n. collected from the king rat snake Elaphe carinata (Günther) (Serpentes: Colubridae) in China is described using both light and scanning electron microscopy. The new species differs from its congeners in the presence of narrow lateral alae originating a short distance posterior to the base of the ventrolateral lips, its relatively long oesophagus (3.57-4.54 mm long, representing 6.6-7.6% of body length), its short spicules (1.89-2.14 mm long, representing 3.9-4.3% of body length), the number and arrangement of caudal papillae (49-57 pairs in total, arranged as follows: 43-51 pairs precloacal, 2 pairs joined paracloacal and 4 pairs postcloacal), the presence of a particular papilliform medioventral, postcloacal ornamentation and the morphology of the eggs and tip of the female tail. In addition, Ophidascaris najae (Gedoelst, 1916), collected from the king cobra Ophiophagus hannah Cantor (Serpentes: Elapidae) in China, is also redescribed. The morphology of the cervical papillae, labial denticles and phasmids of the female is described for the first time. PMID:25651700

  11. Improved Neutronics Treatment of Burnable Poisons for the Prismatic HTR

    SciTech Connect

    Y. Wang; A. A. Bingham; J. Ortensi; C. J. Permann

    2012-10-01

    In prismatic block High Temperature Reactors (HTR), highly absorbing material such a burnable poison (BP) cause local flux depressions and large gradients in the flux across the blocks which can be a challenge to capture accurately with traditional homogenization methods. The purpose of this paper is to quantify the error associated with spatial homogenization, spectral condensation and discretization and to highlight what is needed for improved neutronics treatments of burnable poisons for the prismatic HTR. A new triangular based mesh is designed to separate the BP regions from the fuel assembly. A set of packages including Serpent (Monte Carlo), Xuthos (1storder Sn), Pronghorn (diffusion), INSTANT (Pn) and RattleSnake (2ndorder Sn) is used for this study. The results from the deterministic calculations show that the cross sections generated directly in Serpent are not sufficient to accurately reproduce the reference Monte Carlo solution in all cases. The BP treatment produces good results, but this is mainly due to error cancellation. However, the Super Cell (SC) approach yields cross sections that are consistent with cross sections prepared on an “exact” full core calculation. In addition, very good agreement exists between the various deterministic transport and diffusion codes in both eigenvalue and power distributions. Future research will focus on improving the cross sections and quantifying the error cancellation.

  12. Molecular evolution of HoxA13 and the multiple origins of limbless morphologies in amphibians and reptiles

    PubMed Central

    Singarete, Marina E.; Grizante, Mariana B.; Milograna, Sarah R.; Nery, Mariana F.; Kin, Koryu; Wagner, Günter P.; Kohlsdorf, Tiana

    2015-01-01

    Developmental processes and their results, morphological characters, are inherited through transmission of genes regulating development. While there is ample evidence that cis-regulatory elements tend to be modular, with sequence segments dedicated to different roles, the situation for proteins is less clear, being particularly complex for transcription factors with multiple functions. Some motifs mediating protein-protein interactions may be exclusive to particular developmental roles, but it is also possible that motifs are mostly shared among different processes. Here we focus on HoxA13, a protein essential for limb development. We asked whether the HoxA13 amino acid sequence evolved similarly in three limbless clades: Gymnophiona, Amphisbaenia and Serpentes. We explored variation in ω (dN/dS) using a maximum-likelihood framework and HoxA13sequences from 47 species. Comparisons of evolutionary models provided low ω global values and no evidence that HoxA13 experienced relaxed selection in limbless clades. Branch-site models failed to detect evidence for positive selection acting on any site along branches of Amphisbaena and Gymnophiona, while three sites were identified in Serpentes. Examination of alignments did not reveal consistent sequence differences between limbed and limbless species. We conclude that HoxA13 has no modules exclusive to limb development, which may be explained by its involvement in multiple developmental processes. PMID:26500429

  13. Stabilising the Integrity of Snake Venom mRNA Stored under Tropical Field Conditions Expands Research Horizons

    PubMed Central

    Logan, Rhiannon A. E.; Leung, Kam-Yin D.; Newberry, Fiona J.; Rowley, Paul D.; Dunbar, John P.; Wagstaff, Simon C.; Casewell, Nicholas R.; Harrison, Robert A.

    2016-01-01

    Background Snake venoms contain many proteinaceous toxins that can cause severe pathology and mortality in snakebite victims. Interestingly, mRNA encoding such toxins can be recovered directly from venom, although yields are low and quality is unknown. It also remains unclear whether such RNA contains information about toxin isoforms and whether it is representative of mRNA recovered from conventional sources, such as the venom gland. Answering these questions will address the feasibility of using venom-derived RNA for future research relevant to biomedical and antivenom applications. Methodology/Principal Findings Venom was extracted from several species of snake, including both members of the Viperidae and Elapidae, and either lyophilized or immediately added to TRIzol reagent. TRIzol-treated venom was incubated at a range of temperatures (4–37°C) for a range of durations (0–48 hours), followed by subsequent RNA isolation and assessments of RNA quantity and quality. Subsequently, full-length toxin transcripts were targeted for PCR amplification and Sanger sequencing. TRIzol-treated venom yielded total RNA of greater quantity and quality than lyophilized venom, and with quality comparable to venom gland-derived RNA. Full-length sequences from multiple Viperidae and Elapidae toxin families were successfully PCR amplified from TRIzol-treated venom RNA. We demonstrated that venom can be stored in TRIzol for 48 hours at 4–19°C, and 8 hours at 37°C, at minimal cost to RNA quality, and found that venom RNA encoded multiple toxin isoforms that seemed homologous (98–99% identity) to those found in the venom gland. Conclusions/Significance The non-invasive experimental modifications we propose will facilitate the future investigation of venom composition by using venom as an alternative source to venom gland tissue for RNA-based studies, thus obviating the undesirable need to sacrifice snakes for such research purposes. In addition, they expand research horizons

  14. Presence of a radioactive gas in archaeological excavations, determination and mitigation.

    PubMed

    Balcázar, M; Gómez, S; Peña, P; Zavala Arredondo, J; Gazzola, J; Villamares, A

    2014-01-01

    During recent archaeological discovery and excavation of a tunnel build approximately 2000 years ago by the Teotihuacans under the feathered serpent temple, in Mexico, abnormal radon concentrations up to 700 Bq m(-3) were measured at several excavation stages. The tunnel is at 15m below the earth surface with a vertical rectangular entrance of 4×4 m(2), a semi cylindrical shape of 3m in diameter, with a probable length of 100 m. This study supports the assumption that at the opening of the tunnel radon concentration was around 5500 Bq m(-3); however, although natural convection in the tunnel atmosphere naturally pups radon out, it build up to a maximum concentration of 2000 Bq m(-3). This paper presents the identification of the radon problem in this archaeological site, dose determination, and the mitigation actions that reduced the radon concentration down to 40 Bq m(-3) that ensure a negligible radon risk for archaeologist. PMID:23938077

  15. Teotihuacan and its influence in Mesoamerica. Archaeomagnetic studies

    NASA Astrophysics Data System (ADS)

    Terán, A.; Soler-Arechalde, A. M.

    2013-05-01

    Teotihuacan located at the north of the Basin of Mexico was one of the most important metropolises of Mesoamerica between AD 300-500. The chronological information of the city and its neighborhoods is very important to understand its evolution. We present the results of the sampling at the Feathered Serpent Temple and E complex at La Ciudadela, a zone at the south area of the Pyramids of the Sun and the Moon. These results correspond with a stratigraphic sequence between the 50 BC to AD 500. Two ritual events related with the beginning and the end of the Xolalpan stage (AD325-AD545) were archaeomagnetic dated, events that had been observed too at Teopancazco, the neighborhood of the taylors located at the SE of the city, denoting the importance of them. The beginning of Xolalpan stage is related with the exile of a group of teotihuacan warriors that arrived to Tikal.

  16. An elastica arm scale.

    PubMed

    Bosi, F; Misseroni, D; Dal Corso, F; Bigoni, D

    2014-09-01

    The concept of a 'deformable arm scale' (completely different from a traditional rigid arm balance) is theoretically introduced and experimentally validated. The idea is not intuitive, but is the result of nonlinear equilibrium kinematics of rods inducing configurational forces, so that deflection of the arms becomes necessary for equilibrium, which would be impossible for a rigid system. In particular, the rigid arms of usual scales are replaced by a flexible elastic lamina, free to slide in a frictionless and inclined sliding sleeve, which can reach a unique equilibrium configuration when two vertical dead loads are applied. Prototypes designed to demonstrate the feasibility of the system show a high accuracy in the measurement of load within a certain range of use. Finally, we show that the presented results are strongly related to snaking of confined beams, with implications for locomotion of serpents, plumbing and smart oil drilling. PMID:25197248

  17. Hunter-gatherers and other primates as prey, predators, and competitors of snakes.

    PubMed

    Headland, Thomas N; Greene, Harry W

    2011-12-27

    Relationships between primates and snakes are of widespread interest from anthropological, psychological, and evolutionary perspectives, but surprisingly, little is known about the dangers that serpents have posed to people with prehistoric lifestyles and nonhuman primates. Here, we report ethnographic observations of 120 Philippine Agta Negritos when they were still preliterate hunter-gatherers, among whom 26% of adult males had survived predation attempts by reticulated pythons. Six fatal attacks occurred between 1934 and 1973. Agta ate pythons as well as deer, wild pigs, and monkeys, which are also eaten by pythons, and therefore, the two species were reciprocally prey, predators, and potential competitors. Natural history data document snake predation on tree shrews and 26 species of nonhuman primates as well as many species of primates approaching, mobbing, killing, and sometimes eating snakes. These findings, interpreted within the context of snake and primate phylogenies, corroborate the hypothesis that complex ecological interactions have long characterized our shared evolutionary history. PMID:22160702

  18. We Detect Blue Light Phenomena Correlating with Environmental and Weather Changes, and Historic Native Americans or Their Place Names.

    NASA Astrophysics Data System (ADS)

    Ochs, Michael Ann; Mc Leod, Roger D.; Mc Leod, Edward M.

    2003-10-01

    Katahdin (Christ Cathar Spirit-signal stronghold) in Maine is sacred to the Penobscot Indian Nation. That mountain complex, and areas like Ellis Pond, ME and Penley Hill/Anasagunticook (adherent of Jesus Christ Spirit-signal doctor church) of the Mexico/Rumford/Mountain Valley region, also in Maine, have an association with historic Native Americans like the medicine woman Molocket/Molly Ockett. We have observed that these and other regions generate electromagnetic field (EMF) signals, which we can detect visually and in other ways. Such signals have sometimes been associated with significant and dynamic weather phenomena. Ohio's Serpent Mound and associated regions, or those now occupied by the Hopi Indian Nation, formerly an ancient Anasazi site, or areas of the current and earlier Mayan Nations, or the Nazca Plateau of Peru, may generate signals correlating with climate change, that may impact our technology, as in major power blackouts.

  19. Floridas Miami Tequesta Indian Site, Its Calusa Indian Locations, the Matacumbe Keys, and Orlandos Wikiwa Springs Generate Environmentally Significant EMFs.

    NASA Astrophysics Data System (ADS)

    Mac Dougall, Jean S.; Mc Leod, Roger D.; Mc Leod, David M.

    2003-10-01

    Florida purchased the Tequesta ([Langue] doc Christ Spirit-signal) Indian site along the Miami River site that vigorously pulsates with even minor rainstorms entering or leaving the area. Although there is a laughable chimera of a fountain of youth associated with Ponce de Leons discovery of the Florida peninsula in about AD 1513, the Calusa (Royal Christ Jesus Spirit-signal) Indian Nation has an associated significance with EMF signals they possibly monitored throughout their area of activity. Our efforts have also led to the investigation of cultural and other influences implied by the Matacumbe Keys that indicate a shared commonality of awareness with Native Americans of the northeast such as Metacomet, or regions like Maines Grand Lake Matagamon and its associated electromagnetic Spirit Signal. Wikiwa Springs near Orlando shares much with Massachusetts (adherent of serpent Jesus Christ Spirit-signal) Natick, and New Hampshires Naticook Island. These are the locales of environmentally sensitive instrumentation.

  20. Origins of the ancient constellations: I. The Mesopotamian traditions

    NASA Astrophysics Data System (ADS)

    Rogers, J. H.

    1998-02-01

    In the sky-map of ancient Babylon, constellations had two different roles, and thus developed into two overlapping traditions. One set of constellations represented the gods and their symbols; the other set represented rustic activities and provided a farming calendar. Many constellations were shared by the two traditions, but in some regions of sky there were alternative divine and rustic figures. These figures developed in stages from ~3200 BC to ~500 BC. Of the divine set, the most important (although the last to be finalised) were the twelve zodiacal signs, plus several associated animals (the serpent, crow, eagle, and fish), which were all transmitted to the classical Greek sky-map that we still use today. Conversely, the rustic constellations of workers and tools and animals were not transmitted to the West. However, a few of them may have survived in Bedouin Arab sky-maps of the first millennium AD.

  1. Alteration of Al-rich inclusions inside amoeboid olivine aggregates in the Allende meteorite

    NASA Astrophysics Data System (ADS)

    Hashimoto, A.; Grossman, L.

    1987-06-01

    The primary phases of Al-rich inclusions in amoeboid olivine aggregates have undergone alteration reactions with the solar nebular gas. The simplest interpretation of the present observations is that melilite was the first primary phase to disappear with falling temperature, and was replaced by grossular + anorthite + feldspathoids, followed by fassaite; spinel was the last phase to be altered. Thermodynamic calculations suggest that Na-rich phlogopite could have formed at about 470 K and chlorite at about 328 K at a water fugacity of 0.000001, which is that of a gas of solar composition in this temperature range. The olivine around Al-rich inclusions is not serpentized, indicating the cessation of gas-solid equilibrium above 274 K.

  2. Alteration of Al-rich inclusions inside amoeboid olivine aggregates in the Allende meteorite

    NASA Technical Reports Server (NTRS)

    Hashimoto, Akihiko; Grossman, Lawrence

    1987-01-01

    The primary phases of Al-rich inclusions in amoeboid olivine aggregates have undergone alteration reactions with the solar nebular gas. The simplest interpretation of the present observations is that melilite was the first primary phase to disappear with falling temperature, and was replaced by grossular + anorthite + feldspathoids, followed by fassaite; spinel was the last phase to be altered. Thermodynamic calculations suggest that Na-rich phlogopite could have formed at about 470 K and chlorite at about 328 K at a water fugacity of 0.000001, which is that of a gas of solar composition in this temperature range. The olivine around Al-rich inclusions is not serpentized, indicating the cessation of gas-solid equilibrium above 274 K.

  3. On the Asclepian spirit and the future of psychoanalysis.

    PubMed

    Whitehead, Clay C

    2002-01-01

    The dynamics of the Asclepian myth are analyzed, and generic dynamics of the healing imperative are illustrated. The story teaches much about the early theories and practice of ancient medicine, and originated the healing symbol of the staff and serpent which appears on the emblem of the American Academy. The multi-modal therapeutic approach used at the Asclepia was often climaxed by dream incubation as a centerpiece of the treatment. Dreams from modern physicians in analysis will be introduced to show that while our practice has changed in external trappings, the underlying dynamics of ancient and modern healers reflect a common humanity. Modern therapists have reacquired the use of dreams and invented a new set of explanatory myths. Consideration of future developments leads to linking the "psychosomatic model" of antiquity with the psychopharmacological interventions which are now common-place in psychodynamic psychotherapy. The Asclepian emphasis on spirituality is also finding increasing recognition among psychoanalysts and other scientists. PMID:12064034

  4. S. Weir mitchell and his snakes: unraveling the "united web and woof of popular and scientific beliefs".

    PubMed

    Cervetti, Nancy

    2007-09-01

    Although best known as a nineteenth-century neurologist and creator of the rest cure, S. Weir Mitchell was one of the first Americans to engage in large-scale animal experimentation. In 1860 he published Researches Upon the Venom of the Rattlesnake, and in 1886, in collaboration with Dr. Edward T. Reichert, he published Researches Upon the Venoms of Poisonous Serpents. Yet, Mitchell's pioneering work in scientific medicine remains a little known aspect of his career. This essay, based mainly on primary source material, tells the story of Mitchell's medical education and research on venomous snakes in order to reveal the ways myth and metaphor influenced medicine as it was becoming a science. PMID:17629777

  5. NMR-based diffusion lattice imaging.

    PubMed

    Laun, Frederik Bernd; Müller, Lars; Kuder, Tristan Anselm

    2016-03-01

    Nuclear magnetic resonance (NMR) diffusion experiments are widely employed as they yield information about structures hindering the diffusion process, e.g., about cell membranes. While it has been shown in recent articles that these experiments can be used to determine the shape of closed pores averaged over a volume of interest, it is still an open question how much information can be gained in open well-connected systems. In this theoretical work, it is shown that the full structure information of connected periodic systems is accessible. To this end, the so-called "SEquential Rephasing by Pulsed field-gradient Encoding N Time intervals" (SERPENT) sequence is used, which employs several diffusion encoding gradient pulses with different amplitudes. Two two-dimensional solid matrices that are surrounded by an NMR-visible medium are considered: a hexagonal lattice of cylinders and a rectangular lattice of isosceles triangles. PMID:27078384

  6. Abundance and distribution of ultramafic microbreccia in Moses Rock dike - Quantitative application of mapping spectroscopy

    NASA Technical Reports Server (NTRS)

    Mustard, John F.; Pieters, Carle M.

    1987-01-01

    Data from the Airborne Imaging Spectrometer were used to map the distribution and abundance of the serpentized ultramafic microbreccia (SUM) component in the Moses Rock dike, which is a Tertiary diatreme located on the Colorado Plateau in Utah. The geologic setting and composition of Moses Rock dike are discussed together with its texture and the relationship to the bedrock of surface materials. These observations along with laboratory spectroscopic data are used to interpret surface mineralogy of the dike and the surrounding regions from the imaging spectometer data. The spatial distribution and the abundance of the primary surface components were calculated using a nonlinear model for the mixing of spectra from multicomponent surfaces. The derived SUM distribution and abundance data support McGetchin's (1968) model for the emplacement of Moses Rock dike as a fluidized system.

  7. Environmental Aspects of Sites Like America's Stonehenge, (AS), Florida's Miami Tequesta Site, and Lowell's A.D. 1069

    NASA Astrophysics Data System (ADS)

    Ochs, Michael Ann; Mc Leod, Roger D.

    2002-04-01

    Subtle ``instrumentation" is often unnoticed. Stone-chamber transponder-receivers are principle and secondary wave detectors, part of the ``technologic" arsenal of men like Passaconaway/Metacomen of colonial-era Massachusetts, or the earthquake-predicting Shawnee Tecumseh of the Ohio Valley region, during 1811-1813. An Ohio stone-effigy ``serpent" is a thunderstorm precursor signal indicator. The Hopi require similar ``equipment," when duping gullible ``rain-dance" patrons. Tornado/waterspout activity is documented right in the Tequesta site at the river in Miami, Florida, which generates detectable signals. Columbus could have used similar ``secret sacred science" previously learned from American Indians, and thereby successfully predicted an anomalous hurricane on a subsequent trip. These, and the Hawaiian volcano goddess Pelee, seem to be a mythic equivalent of electromagnetically generated signals, i.e., a metaphor for ``environmental applied physics" we detect at A.S.

  8. Spectroscopy of Moses Rock dike using remote sensing

    NASA Technical Reports Server (NTRS)

    Mustard, J. F.; Pieters, C. M.

    1985-01-01

    Zeiss IR-photographs, NS0001 (TM simulator) and airborne imaging spectrometer (AIS) data were obtained for the Moses Rock kimberlite dike in southern Utah to identify and characterize the distinctive mafic mineralogy of the dike as well as the surrounding sedimentary rocks. The Zeiss and NS001 images provide information on the regional setting and allow units of the dike to be distinguished from the sediments. The AIS data are narrow images obtained in 128 near-infrared channels and provide characterizing information on the surface composition through. Three distinct spectroscopic units were found which have been tentatively identified as serpentized olivine-bearing soils found in the dike and two types of gypsum bearing soils found in the surrounding sedimentary soils.

  9. Envenomation by a juvenile Malayan pit viper (Agkistrodon rhodostoma).

    PubMed

    Vest, D K; Kardong, K V

    1980-05-01

    Following an accidental bite inflicted by a juvenile Malayan pit viper (Agkistrodon rhodostoma), the progress of envenomation was carefully monitored and subsequent laboratory work performed to determine the amount and quality of venom injected. Even a very small amount of venom from this species is capable of inducing noticeable local symptoms including edema, subcutaneous bleeding, and throbbing. Constitutional symptoms were present but minimal. The extent of inflammation present at any given time following envenomation was found to be a more accurate diagnostic signal than the speed with which it developed. This case is similar to that of bites by juveniles of other species of viperines and crotalines and may serve to aid in the diagnosis and treatment of bites by juvenile specimens of serpents in these families. PMID:7398218

  10. Report on the Development of the Advanced Encryption Standard (AES)

    PubMed Central

    Nechvatal, James; Barker, Elaine; Bassham, Lawrence; Burr, William; Dworkin, Morris; Foti, James; Roback, Edward

    2001-01-01

    In 1997, the National Institute of Standards and Technology (NIST) initiated a process to select a symmetric-key encryption algorithm to be used to protect sensitive (unclassified) Federal information in furtherance of NIST’s statutory responsibilities. In 1998, NIST announced the acceptance of 15 candidate algorithms and requested the assistance of the cryptographic research community in analyzing the candidates. This analysis included an initial examination of the security and efficiency characteristics for each algorithm. NIST reviewed the results of this preliminary research and selected MARS, RC™, Rijndael, Serpent and Twofish as finalists. Having reviewed further public analysis of the finalists, NIST has decided to propose Rijndael as the Advanced Encryption Standard (AES). The research results and rationale for this selection are documented in this report.

  11. e-MERLIN data reduction pipeline

    NASA Astrophysics Data System (ADS)

    Argo, Megan

    2014-07-01

    Written in Python and utilizing ParselTongue (ascl:1208.020) to interface with AIPS (ascl:9911.003), the e-MERLIN data reduction pipeline processes, calibrates and images data from the UK's radio interferometric array (Multi-Element Remote-Linked Interferometer Network). Driven by a plain text input file, the pipeline is modular and can be run in stages. The software includes options to load raw data, average in time and/or frequency, flag known sources of interference, flag more comprehensively with SERPent (ascl:1312.001), carry out some or all of the calibration procedures (including self-calibration), and image in either normal or wide-field mode. It also optionally produces a number of useful diagnostic plots at various stages so data quality can be assessed.

  12. We Detect Blue Light Phenomena Correlating with Environmental and Weather Changes, and Historic Native Americans or Their Place Names.

    NASA Astrophysics Data System (ADS)

    Ochs, Michael Ann; Mc Leod, Roger D.; Mc Leod, Edward M.

    2003-10-01

    Katahdin (Christ Cathar Spirit-signal stronghold) in Maine is sacred to the Penobscot Indian Nation. That mountain complex, and areas like Ellis Pond, ME and Penley Hill/Anasagunticook (adherent of Jesus Christ Spirit-signal doctor church) of the Mexico/Rumford/Mountain Valley region, also in Maine, have an association with historic Native Americans like the medicine woman Molocket/Molly Ockett. We have observed that these and other regions generate electromagnetic field (EMF) signals, which we can detect visually and in other ways. Such signals have sometimes been associated with significant and dynamic weather phenomena. Ohio's Serpent Mound and associated regions, or those now occupied by the Hopi Indian Nation, formerly an ancient Anasazi site, or areas of the current and earlier Mayan Nations, or the Nazca Plateau of Peru, may generate signals correlating with climate change, that may impact our technology, as in major power blackouts.

  13. Can Portable Technology Capture Subtle Phenomena, Related to Quakes, Hurricanes, Tornados, and Volcanoes, Culturally Reported in the Americas by an Equivalent of ``Kokopelli'' or Ñari Huallac, i.e., the EMF?

    NASA Astrophysics Data System (ADS)

    Ataide, Jade; McLeod, Roger

    2006-03-01

    Peruvians who produced the CD ÑARI HUALAC say this name of their home village represents two of their few original words, meaning ``serpent God.'' Arizona, hurricane, mullah, Molocket, Millinocket and Allagash of Maine, Allahpata, and Apalachicola of FL, and Allegheny of PA are some partial cognates for these ancient words. They are culturally detected aspects of the EMF, like Kokopelli, the ``hunchbacked, flute-playing, dancing around'' icon of our southwest. That aspect of `flutes' indicated by tinnitus, and its co-associated symptoms of Meuniere's syndrome, along with the sensation of `pins and needles', signify the rotation of secondary magnetic poles, stimulating nerve endings with their EMF that technology can detect, here and in Brazil. Can they fool us about some religious concepts?

  14. Cyanoacrylate repair of laser in situ keratomileusis corneal flap perforation by a snake bite.

    PubMed

    Korn, Bobby S; Korn, Tommy S

    2005-11-01

    A 30-year-old man who had laser in situ keratomileusis (LASIK) for myopia 1 year earlier developed a corneal perforation in the left eye from a boa constrictor. The patient presented to the emergency room, and a small corneal perforation just outside the visual axis was diagnosed within the LASIK flap. Cyanoacrylate adhesive was used to close the corneal perforation. The patient went on to full visual recovery with an uncorrected visual acuity of 20/20. This is the first reported case of a penetrating corneal injury from a serpent in an eye that had LASIK. Cyanoacrylate may be used to repair small traumatic corneal perforations with a favorable visual outcome in eyes that have had LASIK. PMID:16412943

  15. An elastica arm scale

    PubMed Central

    Bosi, F.; Misseroni, D.; Dal Corso, F.; Bigoni, D.

    2014-01-01

    The concept of a ‘deformable arm scale’ (completely different from a traditional rigid arm balance) is theoretically introduced and experimentally validated. The idea is not intuitive, but is the result of nonlinear equilibrium kinematics of rods inducing configurational forces, so that deflection of the arms becomes necessary for equilibrium, which would be impossible for a rigid system. In particular, the rigid arms of usual scales are replaced by a flexible elastic lamina, free to slide in a frictionless and inclined sliding sleeve, which can reach a unique equilibrium configuration when two vertical dead loads are applied. Prototypes designed to demonstrate the feasibility of the system show a high accuracy in the measurement of load within a certain range of use. Finally, we show that the presented results are strongly related to snaking of confined beams, with implications for locomotion of serpents, plumbing and smart oil drilling. PMID:25197248

  16. Snakes as hazards: modelling risk by chasing chimpanzees.

    PubMed

    McGrew, William C

    2015-04-01

    Snakes are presumed to be hazards to primates, including humans, by the snake detection hypothesis (Isbell in J Hum Evol 51:1-35, 2006; Isbell, The fruit, the tree, and the serpent. Why we see so well, 2009). Quantitative, systematic data to test this idea are lacking for the behavioural ecology of living great apes and human foragers. An alternative proxy is snakes encountered by primatologists seeking, tracking, and observing wild chimpanzees. We present 4 years of such data from Mt. Assirik, Senegal. We encountered 14 species of snakes a total of 142 times. Almost two-thirds of encounters were with venomous snakes. Encounters occurred most often in forest and least often in grassland, and more often in the dry season. The hypothesis seems to be supported, if frequency of encounter reflects selective risk of morbidity or mortality. PMID:25600837

  17. NMR-based diffusion lattice imaging

    NASA Astrophysics Data System (ADS)

    Laun, Frederik Bernd; Müller, Lars; Kuder, Tristan Anselm

    2016-03-01

    Nuclear magnetic resonance (NMR) diffusion experiments are widely employed as they yield information about structures hindering the diffusion process, e.g., about cell membranes. While it has been shown in recent articles that these experiments can be used to determine the shape of closed pores averaged over a volume of interest, it is still an open question how much information can be gained in open well-connected systems. In this theoretical work, it is shown that the full structure information of connected periodic systems is accessible. To this end, the so-called "SEquential Rephasing by Pulsed field-gradient Encoding N Time intervals" (SERPENT) sequence is used, which employs several diffusion encoding gradient pulses with different amplitudes. Two two-dimensional solid matrices that are surrounded by an NMR-visible medium are considered: a hexagonal lattice of cylinders and a rectangular lattice of isosceles triangles.

  18. Status Report on the First Round of the Development of the Advanced Encryption Standard

    PubMed Central

    Nechvatal, James; Barker, Elaine; Dodson, Donna; Dworkin, Morris; Foti, James; Roback, Edward

    1999-01-01

    In 1997, the National Institute of Standards and Technology (NIST) initiated a process to select a symmetric-key encryption algorithm to be used to protect sensitive (unclassified) Federal information in furtherance of NIST’s statutory responsibilities. In 1998, NIST announced the acceptance of 15 candidate algorithms and requested the assistance of the cryptographic research community in analyzing the candidates. This analysis included an initial examination of the security and efficiency characteristics for each algorithm. NIST has reviewed the results of this research and selected five algorithms (MARS, RC6™, Rijndael, Serpent and Twofish) as finalists. The research results and rationale for the selection of the finalists are documented in this report. The five finalists will be the subject of further study before the selection of one or more of these algorithms for inclusion in the Advanced Encryption Standard.

  19. Fabrication and characteristics of hexagonal Zn nanowires prepared by heating a mixture of Zn and graphite powders.

    PubMed

    Kim, Hyoun Woo; Kwon, Yong Jung; Cho, Hong Yeon; Na, Han Gil; Lee, Chongmu

    2014-12-01

    We report the fabrication of thin (< 100 nm) hexagonal Zn nanowires in a conventional reactor, by heating a mixture of Zn and graphite powders. By material characterization, the products were identified as one-dimensional nanowires of serpent-like morphology with a hexagonal Zn phase. The main growth mechanism of the Zn nanowires was proposed to be a vapor-solid process, which was corroborated by the absence of any tip catalyst. Raman spectra of the Zn nanowires exhibited a prominent peak at around 570 cm(-1). X-ray photoelectron spectroscopy revealed that the surface of the Zn nanowires was clearly oxygen-deficient in comparison to that of ZnO nanowires. Photoluminescence analysis indicated that the Zn nanowires exhibited emission bands centered at 1.6, 2.0, 2.4, 3.0, and 3.3 eV, respectively. PMID:25970988

  20. Report on the Development of the Advanced Encryption Standard (AES).

    PubMed

    Nechvatal, J; Barker, E; Bassham, L; Burr, W; Dworkin, M; Foti, J; Roback, E

    2001-01-01

    In 1997, the National Institute of Standards and Technology (NIST) initiated a process to select a symmetric-key encryption algorithm to be used to protect sensitive (unclassified) Federal information in furtherance of NIST's statutory responsibilities. In 1998, NIST announced the acceptance of 15 candidate algorithms and requested the assistance of the cryptographic research community in analyzing the candidates. This analysis included an initial examination of the security and efficiency characteristics for each algorithm. NIST reviewed the results of this preliminary research and selected MARS, RC™, Rijndael, Serpent and Twofish as finalists. Having reviewed further public analysis of the finalists, NIST has decided to propose Rijndael as the Advanced Encryption Standard (AES). The research results and rationale for this selection are documented in this report. PMID:27500035

  1. Differentiation of Sex Chromosomes and Karyotype Characterisation in the Dragonsnake Xenodermus javanicus (Squamata: Xenodermatidae).

    PubMed

    Rovatsos, Michail; Johnson Pokorná, Martina; Kratochvíl, Lukáš

    2015-01-01

    Highly differentiated heteromorphic ZZ/ZW sex chromosomes with a heterochromatic W are a basic principle among advanced snakes of the lineage Colubroidea, while other snake lineages generally lack these characteristics. For the first time, we cytogenetically examined the dragonsnake, Xenodermus javanicus, a member of the family Xenodermatidae, which is phylogenetically nested between snake lineages with and without differentiated sex chromosomes. Although most snakes have a karyotype with a stable chromosomal number of 2n = 36, the dragonsnake has an unusual, derived karyotype with 2n = 32 chromosomes. We found that heteromorphic ZZ/ZW sex chromosomes with a heterochromatic W are present in the dragonsnake, which suggests that the emergence of a highly differentiated W sex chromosome within snakes predates the split of Xenodermatidae and the clade including families Pareatidae, Viperidae, Homalopsidae, Lamprophiidae, Elapidae, and Colubridae. Although accumulations of interstitial telomeric sequences have not been previously reported in snakes, by using FISH with a telomeric probe we discovered them in 6 pairs of autosomes as well as in the W sex chromosome of the dragonsnake. Similarly to advanced snakes, the sex chromosomes of the dragonsnake have a significant accumulation of repeats containing a (GATA)n sequence. The results facilitate the dating of the differentiation of sex chromosomes within snakes back to the split between Xenodermatidae and other advanced snakes, i.e. around 40-75 mya. PMID:26575989

  2. Ophidian Spectaculitis and Spectacular Dysecdysis: A Histologic Description.

    PubMed

    Da Silva, M O; Bertelsen, M F; Heegaard, S; Garner, M M

    2015-11-01

    The histologic features of abnormal spectacles in 60 snakes from the 5 families of Boidae, Colubridae, Elapidae, Pythonidae, and Viperidae are described in a retrospective study conducted on specimens submitted to a private diagnostic service during a period of 15 years. Fifty-two snakes had inflammatory reactions in the spectacle. The stroma and outer epithelium of the spectacle were the layers most often involved in inflammatory disease. Lesions of the outer epithelium included edema, hyperkeratosis, and granulocyte infiltration occasionally with bacterial colonies and fungal elements. The stroma had infectious agents and inflammatory reactions in vessels and between the collagen fibrils. The inner epithelium had varying degrees of hyperplasia and hypertrophy, but no infectious agents were seen. Infectious agents in these cases included mites, bacterial disease, fungal disease, or a combination of bacterial and fungal disease. Special stains identified the bacteria most commonly involved to be Gram-positive cocci. Thirteen snakes had dysecdysis of the spectacle. Of these, 5 displayed a concurrent inflammatory reaction of the spectacle, while the remaining 8 snakes had extra keratin layers on a spectacle with an otherwise normal appearance. These keratin layers were attached to serocellular crusts located on the inner surface of the periocular scales. The cause for dyskeratotic lesions of the spectacle was not always apparent, and concurrent acariasis, other forms of dermatitis, trauma, suboptimal husbandry, and visceral disease were considered possible contributing factors. It was notable that only 4% of the submitted cases were found to have spectaculitis and/or spectacular dysecdysis. PMID:26077780

  3. Interaction of toxic venoms with the complement system

    PubMed Central

    Birdsey, Vanessa; Lindorfer, Jean; Gewurz, H.

    1971-01-01

    Thirty-nine venoms from various vertebrate and invertebrate species were tested for their ability to consume haemolytic complement (C) activity upon incubation in fresh guinea-pig serum. Nineteen had `anti-complementary' activity, and these were provisionally sorted into the following groups: Pattern I—exemplified by the Naja haje (Egyptian cobra) and six other Elapidae species (all cobras), which induced selective consumption of C3—C9, and led to formation of a stable C3—C9-consuming intermediate; Pattern II—exemplified by the Agkistrodon rhodostoma (Malayan pit viper), Bitis arietans (puff adder), Bothrops jararaca (South American pit viper), Bothrops atrox (Fer de Lance) and three other species, which induced marked consumption of C4 and C2, as well as C3—C9, but did not form a stable C3—C9-consuming intermediate; and individual animals, e.g. the Lachesis muta (bushmaster), which induced other patterns (III—VI) of complement component consumption. Active fractions of representative venoms were partially purified by ion exchange and gel filtration chromatography and their interactions with the complement system characterized further. It is anticipated that these enzymes, with a capacity to activate the complement system in unique ways, will prove to be of further experimental usefulness. PMID:4398349

  4. Recombinant expression of the precursor of the hemorrhagic metalloproteinase HF3 and its non-catalytic domains using a cell-free synthesis system.

    PubMed

    Menezes, Milene C; Imbert, Lionel; Kitano, Eduardo S; Vernet, Thierry; Serrano, Solange M T

    2016-09-01

    Snake venom metalloproteinases (SVMPs) participate in snakebite pathology such as hemorrhage, inflammation, and necrosis. They are synthesized as latent multi-domain precursors whose processing generates either catalytically active enzymes or free non-enzymatic domains. Recombinant expression of the precursor of P-III class SVMPs has failed due to the instability of the multi-domain polypeptide structure. Conversely, functional recombinant non-catalytic domains were obtained by prokaryotic expression systems. Here, we show for the first time the recombinant expression of the precursor of HF3, a highly hemorrhagic SVMP from Bothrops jararaca, and its non-catalytic domains, using an E. coli-based cell-free synthesis system. The precursor of HF3, composed of pro-, metalloproteinase-, disintegrin-like-, and cysteine-rich domains, and containing 38 Cys residues, was successfully expressed and purified. A protein composed of the disintegrin-like and cysteine-rich domains (DC protein) and the cysteine-rich domain alone (C protein) were expressed in vitro individually and purified. Both proteins were shown to be functional in assays monitoring the interaction with matrix proteins and in modulating the cleavage of fibrinogen by HF3. These data indicate that recombinant expression using prokaryotic-based cell-free synthesis emerges as an attractive alternative for the study of the structure and function of multi-domain proteins with a high content of Cys residues. PMID:27209197

  5. Small serum protein-1 changes the susceptibility of an apoptosis-inducing metalloproteinase HV1 to a metalloproteinase inhibitor in habu snake (Trimeresurus flavoviridis)

    PubMed Central

    Shioi, Narumi; Ogawa, Eiki; Mizukami, Yuki; Abe, Shuhei; Hayashi, Rieko; Terada, Shigeyuki

    2013-01-01

    Viperidae snakes containing various venomous proteins also have several anti-toxic proteins in their sera. However, the physiological function of serum protein has been elucidated incompletely. Small serum protein (SSP)-1 is a major component of the SSPs isolated from the serum of a Japanese viper, the habu snake (Trimeresurus flavoviridis). It exists in the blood as a binary complex with habu serum factor (HSF), a snake venom metalloproteinase inhibitor. Affinity chromatography of the venom on an SSP-1-immobilized column identified HV1, an apoptosis-inducing metalloproteinase, as the target protein of SSP-1. Biacore measurements revealed that SSP-1 was bound to HV1 with a dissociation constant of 8.2 × 10−8 M. However, SSP-1 did not inhibit the peptidase activity of HV1. Although HSF alone showed no inhibitory activity or binding affinity to HV1, the SSP-1–HSF binary complex bound to HV1 formed a ternary complex that non-competitively inhibited the peptidase activity of HV1 with a inhibition constant of 5.1 ± 1.3 × 10−9 M. The SSP-1–HSF complex also effectively suppressed the apoptosis of vascular endothelial cells and caspase 3 activation induced by HV1. Thus, SSP-1 is a unique protein that non-covalently attaches to HV1 and changes its susceptibility to HSF. PMID:23100271

  6. Current challenges for confronting the public health problem of snakebite envenoming in Central America

    PubMed Central

    2014-01-01

    Snakebite envenoming is a serious public health problem in Central America, where approximately 5,500 cases occur every year. Panama has the highest incidence and El Salvador the lowest. The majority, and most severe, cases are inflicted by the pit viper Bothrops asper (family Viperidae), locally known as ‘terciopelo’, ‘barba amarilla’ or ‘equis’. About 1% of the bites are caused by coral snakes of the genus Micrurus (family Elapidae). Despite significant and successful efforts in Central America regarding snakebite envenomings in the areas of research, antivenom manufacture and quality control, training of health professionals in the diagnosis and clinical management of bites, and prevention of snakebites, much remains to be done in order to further reduce the impact of this medical condition. This essay presents seven challenges for improving the confrontation of snakebite envenoming in Central America. Overcoming these challenges demands a coordinated partnership of highly diverse stakeholders though inter-sectorial and inter-programmatic interventions. PMID:24602234

  7. Isolation and characterization of DM40 and DM43, two snake venom metalloproteinase inhibitors from Didelphis marsupialis serum.

    PubMed

    Neves-Ferreira, A G; Cardinale, N; Rocha, S L; Perales, J; Domont, G B

    2000-05-01

    From Didelphis marsupialis serum, two antihemorrhagic proteins were isolated by DEAE-Sephacel, Phenyl-Sepharose and Superdex 200 and characterized. Their masses by mass spectrometry were 40318 AMU for DM40 and 42373 and 43010 AMU for DM43, indicating the presence of isoforms for the last. Molecular masses of 44.8 and 47.3 were obtained by SDS-PAGE, respectively for DM40 and DM43. Both inhibitors showed isoelectric points lower than 3.5 and glycosylation percentages varying from 20.5 to 29.0%, as estimated by chemical deglycosylation and amino acid analysis. N-terminal sequences of the first 17 residues of DM40 and DM43 were identical except for the exchange of R9 for P9. Both were homologous to oprin, a similar inhibitor from Didelphis virginiana serum. No evidence of complex formation between DM40 and DM43 was observed either by native PAGE or gel filtration chromatography. In addition to the antihemorrhagic activity, DM40 and DM43 inhibited the hydrolysis of casein, fibrinogen and fibronectin by Bothrops jararaca venom. DM43 also showed antilethal, antiedematogenic and antihyperalgesic activities. None of the inhibitors showed enzymatic activity on casein. Both proteins formed stable complexes with jararhagin and inhibited its hemorrhagic effect as well as the enzymatic activity of this toxin on fluorogenic substrate. PMID:10779682

  8. PO41, a snake venom metalloproteinase inhibitor isolated from Philander opossum serum.

    PubMed

    Jurgilas, Patrícia B; Neves-Ferreira, Ana G C; Domont, Gilberto B; Perales, Jonas

    2003-11-01

    PO41 was isolated from Philander opossum serum by DEAE-Sephacel, Phenyl Superose and Superdex 200 chromatographies and showed a molecular mass of 41,330 Da by MALDI-TOF MS. Molecular masses of 81.5 and 84.5 kDa were obtained by size exclusion chromatography and dynamic laser light scattering, respectively, suggesting that PO41 is dimeric. Its isoelectric point was estimated to be lower than 3.5. PO41 presented similar amino terminal sequence to those of DM40 and DM43, two antihaemorrhagins previously isolated from Didelphis marsupialis serum and was recognized by polyclonal antibodies raised against D. marsupialis antibothropic fraction. To study the inhibitory properties of this protein, the metalloproteinases bothrolysin and jararhagin were isolated from Bothrops jararaca venom by chromatographies on Superdex 200 and Phenyl Superose. Jararhagin was further submitted to a Mono Q column. The proteolytic and haemorrhagic effects of these haemorrhagins were neutralized by PO41. Both snake venom metalloproteinases formed stable complexes with PO41. The stoichiometry of the complex PO41-jararhagin was one inhibitor subunit to one molecule of the enzyme. These results show that PO41 has physicochemical, structural, immunoreactive and biological properties similar to other metalloproteinase inhibitors belonging to the supergene family of immunoglobulins. PMID:14602117

  9. Purification and renal effects of phospholipase A(2) isolated from Bothrops insularis venom.

    PubMed

    Machado Braga, Marcus Davis; Costa Martins, Alice Maria; Alves, Claudênio Diógenes; de Menezes, Dalgimar Beserra; Martins, René Duarte; Ferreira Barbosa, Paulo Sérgio; de Sousa Oliveira, Isadora Maria; Toyama, Marcos Hikari; Toyama, Daniela Oliveira; Dos Santos Diz Filho, Eduardo Brito; Ramos Fagundes, Fabio Henrique; Fonteles, Manassés Claudino; Azul Monteiro, Helena Serra

    2008-02-01

    Bothrops insularis venom contains a variety of substances presumably responsible for several pharmacological effects. We investigated the biochemical and biological effects of phospholipase A(2) protein isolated from B. insularis venom and the chromatographic profile showed 7 main fractions and the main phospholipase A(2) (PLA(2)) enzymatic activity was detected in fractions IV and V. Fraction IV was submitted to a new chromatographic procedure on ion exchange chromatography, which allowed the elution of 5 main fractions designated as IV-1 to IV-5, from which IV-4 constituted the main fraction. The molecular homogeneity of this fraction was characterized by high-performance liquid chromatography (HPLC) and demonstrated by mass spectrometry (MS), which showed a molecular mass of 13984.20 Da; its N-terminal sequence presented a high amino acid identity (up to 95%) with the PLA(2) of Bothrops jararaca and Bothrops asper. Phospholipase A(2) isolated from B. insularis (Bi PLA(2) ) venom (10 microg/mL) was also studied as to its effect on the renal function of isolated perfused kidneys of Wistar rats (n=6). Bi PLA(2) increased perfusion pressure (PP), renal vascular resistance (RVR), urinary flow (UF) and glomerular filtration rate (GFR). Sodium (%TNa(+)) and chloride tubular reabsorption (%TCl(-)) decreased at 120 min, without alteration in potassium transport. In conclusion, PLA(2) isolated from B. insularis venom promoted renal alterations in the isolated perfused rat kidney. PMID:17953979

  10. Proteomic and Glycoproteomic Profilings Reveal That Post-translational Modifications of Toxins Contribute to Venom Phenotype in Snakes.

    PubMed

    Andrade-Silva, Débora; Zelanis, André; Kitano, Eduardo S; Junqueira-de-Azevedo, Inácio L M; Reis, Marcelo S; Lopes, Aline S; Serrano, Solange M T

    2016-08-01

    Snake venoms are biological weapon systems composed of secreted proteins and peptides that are used for immobilizing or killing prey. Although post-translational modifications are widely investigated because of their importance in many biological phenomena, we currently still have little understanding of how protein glycosylation impacts the variation and stability of venom proteomes. To address these issues, here we characterized the venom proteomes of seven Bothrops snakes using a shotgun proteomics strategy. Moreover, we compared the electrophoretic profiles of native and deglycosylated venoms and, in order to assess their subproteomes of glycoproteins, we identified the proteins with affinity for three lectins with different saccharide specificities and their putative glycosylation sites. As proteinases are abundant glycosylated toxins, we examined the effect of N-deglycosylation on their catalytic activities and show that the proteinases of the seven venoms were similarly affected by removal of N-glycans. Moreover, we prospected putative glycosylation sites of transcripts of a B. jararaca venom gland data set and detected toxin family related patterns of glycosylation. Based on our global analysis, we report that Bothrops venom proteomes and glycoproteomes contain a core of components that markedly define their composition, which is conserved upon evolution in parallel to other molecular markers that determine their phylogenetic classification. PMID:27297130