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Sample records for large target volumes

  1. Dosimetric Comparison of Split Field and Fixed Jaw Techniques for Large IMRT Target Volumes in the Head and Neck

    SciTech Connect

    Srivastava, Shiv P.; Das, Indra J.; Kumar, Arvind; Johnstone, Peter A.S.

    2011-04-01

    Some treatment planning systems (TPSs), when used for large-field (>14 cm) intensity-modulated radiation therapy (IMRT), create split fields that produce excessive multiple-leaf collimator segments, match-line dose inhomogeneity, and higher treatment times than nonsplit fields. A new method using a fixed-jaw technique (FJT) forces the jaw to stay at a fixed position during optimization and is proposed to reduce problems associated with split fields. Dosimetric comparisons between split-field technique (SFT) and FJT used for IMRT treatment is presented. Five patients with head and neck malignancies and regional target volumes were studied and compared with both techniques. Treatment planning was performed on an Eclipse TPS using beam data generated for Varian 2100C linear accelerator. A standard beam arrangement consisting of nine coplanar fields, equally spaced, was used in both techniques. Institutional dose-volume constraints used in head and neck cancer were kept the same for both techniques. The dosimetric coverage for the target volumes between SFT and FJT for head and neck IMRT plan is identical within {+-}1% up to 90% dose. Similarly, the organs at risk (OARs) have dose-volume coverage nearly identical for all patients. When the total monitor unit (MU) and segments were analyzed, SFT produces statistically significant higher segments (17.3 {+-} 6.3%) and higher MU (13.7 {+-} 4.4%) than the FJT. There is no match line in FJT and hence dose uniformity in the target volume is superior to the SFT. Dosimetrically, SFT and FJT are similar for dose-volume coverage; however, the FJT method provides better logistics, lower MU, shorter treatment time, and better dose uniformity. The number of segments and MU also has been correlated with the whole body radiation dose with long-term complications. Thus, FJT should be the preferred option over SFT for large target volumes.

  2. Suspect screening and target quantification of multi-class pharmaceuticals in surface water based on large-volume injection liquid chromatography and time-of-flight mass spectrometry.

    PubMed

    Vergeynst, Leendert; Van Langenhove, Herman; Joos, Pieter; Demeestere, Kristof

    2014-04-01

    The ever-growing number of emerging micropollutants such as pharmaceuticals requests rapid and sensitive full-spectrum analytical techniques. Time-of-flight high-resolution mass spectrometry (TOF-HRMS) is a promising alternative for the state-of-the-art tandem mass spectrometry instruments because of its ability to simultaneously screen for a virtually unlimited number of suspect analytes and to perform target quantification. The challenge for such suspect screening is to develop a strategy, which minimizes the false-negative rate without restraining numerous false-positives. At the same time, omitting laborious sample enrichment through large-volume injection ultra-performance liquid chromatography (LVI-UPLC) avoids selective preconcentration. A suspect screening strategy was developed using LVI-UPLC-TOF-MS aiming the detection of 69 multi-class pharmaceuticals in surface water without the a priori availability of analytical standards. As a novel approach, the screening takes into account the signal-intensity-dependent accurate mass error of TOF-MS, hereby restraining 95 % of the measured suspect pharmaceuticals present in surface water. Application on five Belgian river water samples showed the potential of the suspect screening approach, as exemplified by a false-positive rate not higher than 15 % and given that 30 out of 37 restrained suspect compounds were confirmed by the retention time of analytical standards. Subsequently, this paper discusses the validation and applicability of the LVI-UPLC full-spectrum HRMS method for target quantification of the 69 pharmaceuticals in surface water. Analysis of five Belgian river water samples revealed the occurrence of 17 pharmaceuticals in a concentration range of 17 ng L(-1) up to 3.1 μg L(-1). PMID:24633561

  3. Sci—Fri PM: Dosimetry — 03: Delta4 diode absolute dose response for large and small target volume IMRT QA

    SciTech Connect

    Simard, D; Thakur, V

    2014-08-15

    The goal of this project was to quantify the over-response/under-response of the Delta4 diodes for Helical Tomotherapy plans on extreme target volume sizes. A custom Delta4 phantom quarter with a hole to insert an ionisation chamber (IC) close to the center of the phantom have been used to acquire simultaneous IC and diodes absolute dose measurements. Eight plans for different target volumes were created from 20cm to 1cm diameter. Diodes dose measurements in the target were compared with IC measurement, to quantify absolute dose accuracy. IC measurements show a good agreement with planned dose (±2%). Diode measurements demonstrate a good agreement with IC for regular target size of 5 and 10cm (0 to 1%). For larger targets, an over-response is observed for FW 25mm and 10mm (2 to 3%). for small target of 1cm diameter, a major under-response is observed for FW 25mm and 10mm (−8 and −36%). The over-response could to be due to the extra amount of scattered radiation and the opposite for under-response. Although this scatter hypothesis still has to be proven, early testing demonstrates an over-response of 40%/20% of the central diodes compare to IC when an open helical rotational beam is delivered 75mm/25mm away from the center of the phantom. These results are in agreement with the real patient Delta4 DQA results at our center.

  4. Range resolved mode mixing in a large volume for the mitigation of speckle and strategic target orientation requirements in active millimeter-wave imaging.

    PubMed

    Patrick, Mark A; Holt, Jennifer A; Joye, Colin D; De Lucia, Frank C

    2015-04-01

    In spite of many reports of active millimeter-wave imaging in the literature, speckle and requirements for cooperative target orientation significantly reduce its practical usefulness. Here we report a new technique, range resolved mode mixing (RRMM), which significantly mitigates both of these issues. It also provides a three-dimensional (3D) image. RRMM accomplishes this by combining multimode illumination (which eliminates the requirement for cooperative target orientation) with range resolution (which provides statistical independence of speckle patterns for averaging and the 3D image). The use of a 5W extended interaction klystron amplifier results in large signal margins in the 50 m scale atrium of the Physics Department at Ohio State University. It appears that there are a number of scenarios out to a range of 1 km for which this approach is useful to provide 3D images, with minimal speckle, and no requirement for cooperative target orientation. PMID:26366774

  5. Large volume manufacture of dymalloy

    SciTech Connect

    1998-06-22

    The purpose of this research was to test the commercial viability and feasibility of Dymalloy, a composite material to measure thermal conductivity. Dymalloy was developed as part of a CRADA with Sun Microsystems. Sun Microsystems was a potential end user of Dymalloy as a substrate for MCMS. Sun had no desire to be involved in the manufacture of this material. The goal of this small business CRADA with Spectra Mat was to establish the high volume commercial manufacturing industry source for Dymalloy required by an end-user such as Sun Microsystems. The difference between the fabrication technique developed during the CRADA and this proposed work related to the mechanical technique of coating the diamond powder. Mechanical parts for the high-volume diamond powder coating process existed; however, they needed to be installed in an existing coating system for evaluation. Sputtering systems similar to the one required for this project were available at LLNL. Once the diamond powder was coated, both LLNL and Spectra Mat could make and test the Dymalloy composites. Spectra Mat manufactured Dymalloy composites in order to evaluate and establish a reasonable cost estimate on their existing processing capabilities. This information was used by Spectra Mat to define the market and cost-competitive products that could be commercialized from this new substrate material.

  6. Variation in the Gross Tumor Volume and Clinical Target Volume for Preoperative Radiotherapy of Primary Large High-Grade Soft Tissue Sarcoma of the Extremity Among RTOG Sarcoma Radiation Oncologists

    SciTech Connect

    Wang Dian; Bosch, Walter; Kirsch, David G.; Al Lozi, Rawan; El Naqa, Issam; Roberge, David; Finkelstein, Steven E.; Petersen, Ivy; Haddock, Michael; Chen, Yen-Lin E.; Saito, Naoyuki G.; Hitchcock, Ying J.; Wolfson, Aaron H.; DeLaney, Thomas F.

    2011-12-01

    Purpose: To evaluate variability in the definition of preoperative radiotherapy gross tumor volume (GTV) and clinical target volume (CTV) delineated by sarcoma radiation oncologists. Methods and Materials: Extremity sarcoma planning CT images along with the corresponding diagnostic MRI from two patients were distributed to 10 Radiation Therapy Oncology Group sarcoma radiation oncologists with instructions to define GTV and CTV using standardized guidelines. The CT data with contours were then returned for central analysis. Contours representing statistically corrected 95% (V95) and 100% (V100) agreement were computed for each structure. Results: For the GTV, the minimum, maximum, mean (SD) volumes (mL) were 674, 798, 752 {+-} 35 for the lower extremity case and 383, 543, 447 {+-} 46 for the upper extremity case. The volume (cc) of the union, V95 and V100 were 882, 761, and 752 for the lower, and 587, 461, and 455 for the upper extremity, respectively. The overall GTV agreement was judged to be almost perfect in both lower and upper extremity cases (kappa = 0.9 [p < 0.0001] and kappa = 0.86 [p < 0.0001]). For the CTV, the minimum, maximum, mean (SD) volumes (mL) were 1145, 1911, 1605 {+-} 211 for the lower extremity case and 637, 1246, 1006 {+-} 180 for the upper extremity case. The volume (cc) of the union, V95, and V100 were 2094, 1609, and 1593 for the lower, and 1533, 1020, and 965 for the upper extremity cases, respectively. The overall CTV agreement was judged to be almost perfect in the lower extremity case (kappa = 0.85 [p < 0.0001]) but only substantial in the upper extremity case (kappa = 0.77 [p < 0.0001]). Conclusions: Almost perfect agreement existed in the GTV of these two representative cases. Tshere was no significant disagreement in the CTV of the lower extremity, but variation in the CTV of upper extremity was seen, perhaps related to the positional differences between the planning CT and the diagnostic MRI.

  7. Distributed shared memory for roaming large volumes.

    PubMed

    Castanié, Laurent; Mion, Christophe; Cavin, Xavier; Lévy, Bruno

    2006-01-01

    We present a cluster-based volume rendering system for roaming very large volumes. This system allows to move a gigabyte-sized probe inside a total volume of several tens or hundreds of gigabytes in real-time. While the size of the probe is limited by the total amount of texture memory on the cluster, the size of the total data set has no theoretical limit. The cluster is used as a distributed graphics processing unit that both aggregates graphics power and graphics memory. A hardware-accelerated volume renderer runs in parallel on the cluster nodes and the final image compositing is implemented using a pipelined sort-last rendering algorithm. Meanwhile, volume bricking and volume paging allow efficient data caching. On each rendering node, a distributed hierarchical cache system implements a global software-based distributed shared memory on the cluster. In case of a cache miss, this system first checks page residency on the other cluster nodes instead of directly accessing local disks. Using two Gigabit Ethernet network interfaces per node, we accelerate data fetching by a factor of 4 compared to directly accessing local disks. The system also implements asynchronous disk access and texture loading, which makes it possible to overlap data loading, volume slicing and rendering for optimal volume roaming. PMID:17080865

  8. Interobserver Variation of Clinical Target Volume Delineation in Gastric Cancer

    SciTech Connect

    Jansen, Edwin; Verheij, Marcel

    2010-07-15

    Purpose: To evaluate interobserver variability in clinical target volume (CTV) delineation in gastric cancer performed with the help of a delineation guide. Patients and Methods: Ten radiotherapy centers that participate in the CRITICS Phase III trial were provided with a delineation atlas, preoperative CT scans, a postoperative planning CT scan, and clinical information for a gastric cancer case and were asked to construct a CTV and create a dosimetric plan according to departmental policy. Results: The volumes of the CTVs and planning target volumes (PTVs) differed greatly, with a mean (SD) CTV volume of 392 (176) cm{sup 3} (range, 240-821cm{sup 3}) and PTV volume of 915 (312) cm{sup 3} (range, 634-1677cm{sup 3}). The overlapping volume was 376cm{sup 3} for the CTV and 890cm{sup 3} for the PTV. The greatest differences in the CTV were seen at the cranial and caudal parts. After planning, dose coverage of the overlapping PTV volume showed less variability than the CTV. Conclusion: In this series of 10 plans, variability of the CTV in postoperative chemoradiotherapy for gastric cancer is large. Strict and clear delineation guidelines should be provided, especially in Phase III multicenter studies. Adaptations of these guidelines should be evaluated in clinical studies.

  9. Large volume axionic Swiss cheese inflation

    NASA Astrophysics Data System (ADS)

    Misra, Aalok; Shukla, Pramod

    2008-09-01

    Continuing with the ideas of (Section 4 of) [A. Misra, P. Shukla, Moduli stabilization, large-volume dS minimum without anti-D3-branes, (non-)supersymmetric black hole attractors and two-parameter Swiss cheese Calabi Yau's, arXiv: 0707.0105 [hep-th], Nucl. Phys. B, in press], after inclusion of perturbative and non-perturbative α corrections to the Kähler potential and (D1- and D3-) instanton generated superpotential, we show the possibility of slow roll axionic inflation in the large volume limit of Swiss cheese Calabi Yau orientifold compactifications of type IIB string theory. We also include one- and two-loop corrections to the Kähler potential but find the same to be subdominant to the (perturbative and non-perturbative) α corrections. The NS NS axions provide a flat direction for slow roll inflation to proceed from a saddle point to the nearest dS minimum.

  10. Large volume flow-through scintillating detector

    DOEpatents

    Gritzo, Russ E.; Fowler, Malcolm M.

    1995-01-01

    A large volume flow through radiation detector for use in large air flow situations such as incinerator stacks or building air systems comprises a plurality of flat plates made of a scintillating material arranged parallel to the air flow. Each scintillating plate has a light guide attached which transfers light generated inside the scintillating plate to an associated photomultiplier tube. The output of the photomultiplier tubes are connected to electronics which can record any radiation and provide an alarm if appropriate for the application.

  11. Combined Recipe for Clinical Target Volume and Planning Target Volume Margins

    SciTech Connect

    Stroom, Joep; Gilhuijs, Kenneth; Vieira, Sandra; Chen, Wei; Salguero, Javier; Moser, Elizabeth; Sonke, Jan-Jakob

    2014-03-01

    Purpose: To develop a combined recipe for clinical target volume (CTV) and planning target volume (PTV) margins. Methods and Materials: A widely accepted PTV margin recipe is M{sub geo} = aΣ{sub geo} + bσ{sub geo}, with Σ{sub geo} and σ{sub geo} standard deviations (SDs) representing systematic and random geometric uncertainties, respectively. On the basis of histopathology data of breast and lung tumors, we suggest describing the distribution of microscopic islets around the gross tumor volume (GTV) by a half-Gaussian with SD Σ{sub micro}, yielding as possible CTV margin recipe: M{sub micro} = ƒ(N{sub i}) × Σ{sub micro}, with N{sub i} the average number of microscopic islets per patient. To determine ƒ(N{sub i}), a computer model was developed that simulated radiation therapy of a spherical GTV with isotropic distribution of microscopic disease in a large group of virtual patients. The minimal margin that yielded D{sub min} <95% in maximally 10% of patients was calculated for various Σ{sub micro} and N{sub i}. Because Σ{sub micro} is independent of Σ{sub geo}, we propose they should be added quadratically, yielding for a combined GTV-to-PTV margin recipe: M{sub GTV-PTV} = √([aΣ{sub geo}]{sup 2} + [ƒ(N{sub i})Σ{sub micro}]{sup 2}) + bσ{sub geo}. This was validated by the computer model through numerous simultaneous simulations of microscopic and geometric uncertainties. Results: The margin factor ƒ(N{sub i}) in a relevant range of Σ{sub micro} and N{sub i} can be given by: ƒ(N{sub i}) = 1.4 + 0.8log(N{sub i}). Filling in the other factors found in our simulations (a = 2.1 and b = 0.8) yields for the combined recipe: M{sub GTV-PTV} = √((2.1Σ{sub geo}){sup 2} + ([1.4 + 0.8log(N{sub i})] × Σ{sub micro}){sup 2}) + 0.8σ{sub geo}. The average margin difference between the simultaneous simulations and the above recipe was 0.2 ± 0.8 mm (1 SD). Calculating M{sub geo} and M{sub micro} separately and adding them linearly overestimated PTVs by on

  12. LARGE volume string compactifications at finite temperature

    NASA Astrophysics Data System (ADS)

    Anguelova, Lilia; Calò, Vincenzo; Cicoli, Michele

    2009-10-01

    We present a detailed study of the finite-temperature behaviour of the LARGE Volume type IIB flux compactifications. We show that certain moduli can thermalise at high temperatures. Despite that, their contribution to the finite-temperature effective potential is always negligible and the latter has a runaway behaviour. We compute the maximal temperature Tmax, above which the internal space decompactifies, as well as the temperature T*, that is reached after the decay of the heaviest moduli. The natural constraint T* < Tmax implies a lower bound on the allowed values of the internal volume Script V. We find that this restriction rules out a significant range of values corresponding to smaller volumes of the order Script V ~ 104ls6, which lead to standard GUT theories. Instead, the bound favours values of the order Script V ~ 1015ls6, which lead to TeV scale SUSY desirable for solving the hierarchy problem. Moreover, our result favours low-energy inflationary scenarios with density perturbations generated by a field, which is not the inflaton. In such a scenario, one could achieve both inflation and TeV-scale SUSY, although gravity waves would not be observable. Finally, we pose a two-fold challenge for the solution of the cosmological moduli problem. First, we show that the heavy moduli decay before they can begin to dominate the energy density of the Universe. Hence they are not able to dilute any unwanted relics. And second, we argue that, in order to obtain thermal inflation in the closed string moduli sector, one needs to go beyond the present EFT description.

  13. SUSY's Ladder: reframing sequestering at Large Volume

    NASA Astrophysics Data System (ADS)

    Reece, Matthew; Xue, Wei

    2016-04-01

    Theories with approximate no-scale structure, such as the Large Volume Scenario, have a distinctive hierarchy of multiple mass scales in between TeV gaugino masses and the Planck scale, which we call SUSY's Ladder. This is a particular realization of Split Supersymmetry in which the same small parameter suppresses gaugino masses relative to scalar soft masses, scalar soft masses relative to the gravitino mass, and the UV cutoff or string scale relative to the Planck scale. This scenario has many phenomenologically interesting properties, and can avoid dangers including the gravitino problem, flavor problems, and the moduli-induced LSP problem that plague other supersymmetric theories. We study SUSY's Ladder using a superspace formalism that makes the mysterious cancelations in previous computations manifest. This opens the possibility of a consistent effective field theory understanding of the phenomenology of these scenarios, based on power-counting in the small ratio of string to Planck scales. We also show that four-dimensional theories with approximate no-scale structure enforced by a single volume modulus arise only from two special higher-dimensional theories: five-dimensional supergravity and ten-dimensional type IIB supergravity. This gives a phenomenological argument in favor of ten dimensional ultraviolet physics which is different from standard arguments based on the consistency of superstring theory.

  14. Comments on large-N volume independence

    SciTech Connect

    Poppitz, Erich; Unsal, Mithat; /SLAC /Stanford U., Phys. Dept.

    2010-06-02

    We study aspects of the large-N volume independence on R{sup 3} X L{sup {Gamma}}, where L{sup {Gamma}} is a {Gamma}site lattice for Yang-Mills theory with adjoint Wilson-fermions. We find the critical number of lattice sites above which the center-symmetry analysis on L{sup {Gamma}} agrees with the one on the continuum S{sup 1}. For Wilson parameter set to one and {Gamma}{>=}2, the two analyses agree. One-loop radiative corrections to Wilson-line masses are finite, reminiscent of the UV-insensitivity of the Higgs mass in deconstruction/Little-Higgs theories. Even for theories with {Gamma}=1, volume independence in QCD(adj) may be guaranteed to work by tuning one low-energy effective field theory parameter. Within the parameter space of the theory, at most three operators of the 3d effective field theory exhibit one-loop UV-sensitivity. This opens the analytical prospect to study 4d non-perturbative physics by using lower dimensional field theories (d=3, in our example).

  15. A new large-volume multianvil system

    NASA Astrophysics Data System (ADS)

    Frost, D. J.; Poe, B. T.; Trønnes, R. G.; Liebske, C.; Duba, A.; Rubie, D. C.

    2004-06-01

    A scaled-up version of the 6-8 Kwai-type multianvil apparatus has been developed at the Bayerisches Geoinstitut for operation over ranges of pressure and temperature attainable in conventional systems but with much larger sample volumes. This split-cylinder multianvil system is used with a hydraulic press that can generate loads of up to 5000 t (50 MN). The six tool-steel outer-anvils define a cubic cavity of 100 mm edge-length in which eight 54 mm tungsten carbide cubic inner-anvils are compressed. Experiments are performed using Cr 2O 3-doped MgO octahedra and pyrophyllite gaskets. Pressure calibrations at room temperature and high temperature have been performed with 14/8, 18/8, 18/11, 25/17 and 25/15 OEL/TEL (octahedral edge-length/anvil truncation edge-length, in millimetre) configurations. All configurations tested reach a limiting plateau where the sample-pressure no longer increases with applied load. Calibrations with different configurations show that greater sample-pressure efficiency can be achieved by increasing the OEL/TEL ratio. With the 18/8 configuration the GaP transition is reached at a load of 2500 t whereas using the 14/8 assembly this pressure cannot be reached even at substantially higher loads. With an applied load of 2000 t the 18/8 can produce MgSiO 3 perovskite at 1900 °C with a sample volume of ˜20 mm 3, compared with <3 mm 3 in conventional multianvil systems at the same conditions. The large octahedron size and use of a stepped LaCrO 3 heater also results in significantly lower thermal gradients over the sample.

  16. Large volumes and spectroscopy of walking theories

    NASA Astrophysics Data System (ADS)

    Del Debbio, L.; Lucini, B.; Patella, A.; Pica, C.; Rago, A.

    2016-03-01

    A detailed investigation of finite-size effects is performed for SU(2) gauge theory with two fermions in the adjoint representation, which previous lattice studies have shown to be inside the conformal window. The system is investigated with different spatial and temporal boundary conditions on lattices of various spatial and temporal extensions, for two values of the bare fermion mass representing a heavy and light fermion regime. Our study shows that the infinite-volume limit of masses and decay constants in the mesonic sector is reached only when the mass of the pseudoscalar particle MPS and the spatial lattice size L satisfy the relation L MPS≥15 . This bound, which is at least a factor of three higher than what is observed in QCD, is a likely consequence of the different spectral signatures of the two theories, with the scalar isosinglet (0++ glueball) being the lightest particle in our model. In addition to stressing the importance of simulating large lattice sizes, our analysis emphasizes the need to understand quantitatively the full spectrum of the theory rather than just the spectrum in the mesonic isotriplet sector. While for the lightest fermion measuring masses from gluonic operators proves to be still challenging, reliable results for glueball states are obtained at the largest fermion mass and, in the mesonic sector, for both fermion masses. As a byproduct of our investigation, we perform a finite-size scaling of the pseudoscalar mass and decay constant. The data presented in this work support the conformal behavior of this theory with an anomalous dimension γ*≃0.37 .

  17. Large-volume sampling and preconcentration for trace explosives detection.

    SciTech Connect

    Linker, Kevin Lane

    2004-05-01

    A trace explosives detection system typically contains three subsystems: sample collection, preconcentration, and detection. Sample collection of trace explosives (vapor and particulate) through large volumes of airflow helps reduce sampling time while increasing the amount of dilute sample collected. Preconcentration of the collected sample before introduction into the detector improves the sensitivity of the detector because of the increase in sample concentration. By combining large-volume sample collection and preconcentration, an improvement in the detection of explosives is possible. Large-volume sampling and preconcentration is presented using a systems level approach. In addition, the engineering of large-volume sampling and preconcentration for the trace detection of explosives is explained.

  18. Large space systems technology, 1980, volume 1

    NASA Technical Reports Server (NTRS)

    Kopriver, F., III (Compiler)

    1981-01-01

    The technological and developmental efforts in support of the large space systems technology are described. Three major areas of interests are emphasized: (1) technology pertient to large antenna systems; (2) technology related to large space systems; and (3) activities that support both antenna and platform systems.

  19. Liposome technology. Volume III: Targeted drug delivery and biological interaction

    SciTech Connect

    Gregoriadis, G.

    1984-01-01

    These three volumes cover liposome technology in pharmacology and medicine. Contributors emphasize methodology used in their own laboratories, and include a brief introduction, coverage of relevant literature, applications and critical evaluations for the methods they describe. In Volume III, the growing variety of techniques yielding targeted liposomes and approaches of studying liposomal behavior both in vitro and in vivo are discussed.

  20. Large mode-volume, large beta, photonic crystal laser resonator

    SciTech Connect

    Dezfouli, Mohsen Kamandar; Dignam, Marc M.

    2014-12-15

    We propose an optical resonator formed from the coupling of 13, L2 defects in a triangular-lattice photonic crystal slab. Using a tight-binding formalism, we optimized the coupled-defect cavity design to obtain a resonator with predicted single-mode operation, a mode volume five times that of an L2-cavity mode and a beta factor of 0.39. The results are confirmed using finite-difference time domain simulations. This resonator is very promising for use as a single mode photonic crystal vertical-cavity surface-emitting laser with high saturation output power compared to a laser consisting of one of the single-defect cavities.

  1. Technologies for imaging neural activity in large volumes.

    PubMed

    Ji, Na; Freeman, Jeremy; Smith, Spencer L

    2016-08-26

    Neural circuitry has evolved to form distributed networks that act dynamically across large volumes. Conventional microscopy collects data from individual planes and cannot sample circuitry across large volumes at the temporal resolution relevant to neural circuit function and behaviors. Here we review emerging technologies for rapid volume imaging of neural circuitry. We focus on two critical challenges: the inertia of optical systems, which limits image speed, and aberrations, which restrict the image volume. Optical sampling time must be long enough to ensure high-fidelity measurements, but optimized sampling strategies and point-spread function engineering can facilitate rapid volume imaging of neural activity within this constraint. We also discuss new computational strategies for processing and analyzing volume imaging data of increasing size and complexity. Together, optical and computational advances are providing a broader view of neural circuit dynamics and helping elucidate how brain regions work in concert to support behavior. PMID:27571194

  2. Large volume continuous counterflow dialyzer has high efficiency

    NASA Technical Reports Server (NTRS)

    Mandeles, S.; Woods, E. C.

    1967-01-01

    Dialyzer separates macromolecules from small molecules in large volumes of solution. It takes advantage of the high area/volume ratio in commercially available 1/4-inch dialysis tubing and maintains a high concentration gradient at the dialyzing surface by counterflow.

  3. Large Volume Injection Techniques in Capillary Gas Chromatography

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Large volume injection (LVI) is a prerequisite of modern gas chromatographic (GC) analysis, especially when trace sample components have to be determined at very low concentration levels. Injection of larger than usual sample volumes increases sensitivity and/or reduces (or even eliminates) the need...

  4. The Newly Upgraded Large COMPASS Polarized Target

    SciTech Connect

    Gautheron, F.

    2007-06-13

    During the CERN SPS 2005 shutdown the COMPASS target system received a major hardware upgrade for the new period of data taking starting in 2006. A new superconducting magnet with a larger acceptance combined with a new microwave cavity and a three cell target setup have been installed and already showed excellent performances that we present for the first time.

  5. Large-Volume Gravid Traps Enhance Collection of Culex Vectors.

    PubMed

    Popko, David A; Walton, William E

    2016-06-01

    Gravid mosquito collections were compared among several large-volume (infusion volume ≥35 liters) gravid trap designs and the small-volume (infusion volume  =  6 liters) Centers for Disease Control and Prevention (CDC) gravid trap used routinely by vector control districts for vector and pathogen surveillance. The numbers of gravid Culex quinquefasciatus, Cx. tarsalis, and Cx. stigmatosoma collected by large gravid traps were greater than by the CDC gravid trap during nearly all overnight trials. Large-volume gravid traps collected on average 6.6-fold more adult female Culex mosquitoes compared to small-volume CDC gravid traps across 3 seasons during the 3 years of the studies. The differences in gravid mosquito collections between large-versus small-volume gravid traps were greatest during spring, when 8- to 56-fold more Culex individuals were collected using large-volume gravid traps. The proportion of gravid females in collections did not differ appreciably among the more effective trap designs tested. Important determinants of gravid trap performance were infusion container size and type as well as infusion volume, which determined the distance between the suction trap and the infusion surface. Of lesser importance for gravid trap performance were the number of suction traps, method of suction trap mounting, and infusion concentration. Fermentation of infusions between 1 and 4 wk weakly affected total mosquito collections, with Cx. stigmatosoma collections moderately enhanced by comparatively young and organically enriched infusions. A suction trap mounted above 100 liters of organic infusion housed in a 121-liter black plastic container collected the most gravid mosquitoes over the greatest range of experimental conditions, and a 35-liter infusion with side-mounted suction traps was a promising lesser-volume alternative design. PMID:27280347

  6. Is internal target volume accurate for dose evaluation in lung cancer stereotactic body radiotherapy?

    PubMed Central

    Peng, Jiayuan; Zhang, Zhen; Wang, Jiazhou; Xie, Jiang; Hu, Weigang

    2016-01-01

    Purpose 4DCT delineated internal target volume (ITV) was applied to determine the tumor motion and used as planning target in treatment planning in lung cancer stereotactic body radiotherapy (SBRT). This work is to study the accuracy of using ITV to predict the real target dose in lung cancer SBRT. Materials and methods Both for phantom and patient cases, the ITV and gross tumor volumes (GTVs) were contoured on the maximum intensity projection (MIP) CT and ten CT phases, respectively. A SBRT plan was designed using ITV as the planning target on average projection (AVG) CT. This plan was copied to each CT phase and the dose distribution was recalculated. The GTV_4D dose was acquired through accumulating the GTV doses over all ten phases and regarded as the real target dose. To analyze the ITV dose error, the ITV dose was compared to the real target dose by endpoints of D99, D95, D1 (doses received by the 99%, 95% and 1% of the target volume), and dose coverage endpoint of V100(relative volume receiving at least the prescription dose). Results The phantom study shows that the ITV underestimates the real target dose by 9.47%∼19.8% in D99, 4.43%∼15.99% in D95, and underestimates the dose coverage by 5% in V100. The patient cases show that the ITV underestimates the real target dose and dose coverage by 3.8%∼10.7% in D99, 4.7%∼7.2% in D95, and 3.96%∼6.59% in V100 in motion target cases. Conclusions Cautions should be taken that ITV is not accurate enough to predict the real target dose in lung cancer SBRT with large tumor motions. Restricting the target motion or reducing the target dose heterogeneity could reduce the ITV dose underestimation effect in lung SBRT. PMID:26968812

  7. Cosmological moduli problem in large volume scenario and thermal inflation

    SciTech Connect

    Choi, Kiwoon; Park, Wan-Il; Shin, Chang Sub E-mail: wipark@kias.re.kr

    2013-03-01

    We show that in a large volume scenario of type IIB string or F-theory compactifications, single thermal inflation provides only a partial solution to the cosmological problem of the light volume modulus. We then clarify the conditions for double thermal inflation, being a simple extension of the usual single thermal inflation scenario, to solve the cosmological moduli problem in the case of relatively light moduli masses. Using a specific example, we demonstrate that double thermal inflation can be realized in large volume scenario in a natural manner, and the problem of the light volume modulus can be solved for the whole relevant mass range. We also find that right amount of baryon asymmetry and dark matter can be obtained via a late-time Affleck-Dine mechanism and the decays of the visible sector NLSP to flatino LSP.

  8. Performance of large electron energy filter in large volume plasma device

    SciTech Connect

    Singh, S. K.; Srivastava, P. K.; Awasthi, L. M.; Mattoo, S. K.; Sanyasi, A. K.; Kaw, P. K.; Singh, R.

    2014-03-15

    This paper describes an in-house designed large Electron Energy Filter (EEF) utilized in the Large Volume Plasma Device (LVPD) [S. K. Mattoo, V. P. Anita, L. M. Awasthi, and G. Ravi, Rev. Sci. Instrum. 72, 3864 (2001)] to secure objectives of (a) removing the presence of remnant primary ionizing energetic electrons and the non-thermal electrons, (b) introducing a radial gradient in plasma electron temperature without greatly affecting the radial profile of plasma density, and (c) providing a control on the scale length of gradient in electron temperature. A set of 19 independent coils of EEF make a variable aspect ratio, rectangular solenoid producing a magnetic field (B{sub x}) of 100 G along its axis and transverse to the ambient axial field (B{sub z} ∼ 6.2 G) of LVPD, when all its coils are used. Outside the EEF, magnetic field reduces rapidly to 1 G at a distance of 20 cm from the center of the solenoid on either side of target and source plasma. The EEF divides LVPD plasma into three distinct regions of source, EEF and target plasma. We report that the target plasma (n{sub e} ∼ 2 × 10{sup 11} cm{sup −3} and T{sub e} ∼ 2 eV) has no detectable energetic electrons and the radial gradients in its electron temperature can be established with scale length between 50 and 600 cm by controlling EEF magnetic field. Our observations reveal that the role of the EEF magnetic field is manifested by the energy dependence of transverse electron transport and enhanced transport caused by the plasma turbulence in the EEF plasma.

  9. Monte Carlo Simulations for Dosimetry in Prostate Radiotherapy with Different Intravesical Volumes and Planning Target Volume Margins

    PubMed Central

    Lv, Wei; Yu, Dong; He, Hengda; Liu, Qian

    2016-01-01

    In prostate radiotherapy, the influence of bladder volume variation on the dose absorbed by the target volume and organs at risk is significant and difficult to predict. In addition, the resolution of a typical medical image is insufficient for visualizing the bladder wall, which makes it more difficult to precisely evaluate the dose to the bladder wall. This simulation study aimed to quantitatively investigate the relationship between the dose received by organs at risk and the intravesical volume in prostate radiotherapy. The high-resolution Visible Chinese Human phantom and the finite element method were used to construct 10 pelvic models with specific intravesical volumes ranging from 100 ml to 700 ml to represent bladders of patients with different bladder filling capacities during radiotherapy. This series of models was utilized in six-field coplanar 3D conformal radiotherapy simulations with different planning target volume (PTV) margins. Each organ’s absorbed dose was calculated using the Monte Carlo method. The obtained bladder wall displacements during bladder filling were consistent with reported clinical measurements. The radiotherapy simulation revealed a linear relationship between the dose to non-targeted organs and the intravesical volume and indicated that a 10-mm PTV margin for a large bladder and a 5-mm PTV margin for a small bladder reduce the effective dose to the bladder wall to similar degrees. However, larger bladders were associated with evident protection of the intestines. Detailed dosimetry results can be used by radiation oncologists to create more accurate, individual water preload protocols according to the patient’s anatomy and bladder capacity. PMID:27441944

  10. Large-Volume High-Pressure Mineral Physics in Japan

    NASA Astrophysics Data System (ADS)

    Liebermann, Robert C.; Prewitt, Charles T.; Weidner, Donald J.

    American high-pressure research with large sample volumes developed rapidly in the 1950s during the race to produce synthetic diamonds. At that time the piston cylinder, girdle (or belt), and tetrahedral anvil devices were invented. However, this development essentially stopped in the late 1950s, and while the diamond anvil cell has been used extensively in the United States with spectacular success for high-pressure experiments in small sample volumes, most of the significant technological advances in large-volume devices have taken place in Japan. Over the past 25 years, these technical advances have enabled a fourfold increase in pressure, with many important investigations of the chemical and physical properties of materials synthesized at high temperatures and pressures that cannot be duplicated with any apparatus currently available in the United States.

  11. A Warm Magnetoactive Plasma in a Large Volume of Space

    NASA Technical Reports Server (NTRS)

    Heiles, C.

    1984-01-01

    A diffuse ionized warm gas fills a large volume of space in the general direction of Radio Loop II. There are three types of observational evidence: Faraday rotation measures (RM's) of extragalactic sources; emission measures (EM's) derived from the H alpha emission line in the diffuse interstellar medium; and magnetic field strengths in HI clouds derived from Zeeman splitting observations.

  12. Large-volume en-bloc staining for electron microscopy-based connectomics

    PubMed Central

    Hua, Yunfeng; Laserstein, Philip; Helmstaedter, Moritz

    2015-01-01

    Large-scale connectomics requires dense staining of neuronal tissue blocks for electron microscopy (EM). Here we report a large-volume dense en-bloc EM staining protocol that overcomes the staining gradients, which so far substantially limited the reconstructable volumes in three-dimensional (3D) EM. Our protocol provides densely reconstructable tissue blocks from mouse neocortex sized at least 1 mm in diameter. By relaxing the constraints on precise topographic sample targeting, it makes the correlated functional and structural analysis of neuronal circuits realistic. PMID:26235643

  13. Large discharge-volume, silent discharge spark plug

    DOEpatents

    Kang, Michael

    1995-01-01

    A large discharge-volume spark plug for providing self-limiting microdischarges. The apparatus includes a generally spark plug-shaped arrangement of a pair of electrodes, where either of the two coaxial electrodes is substantially shielded by a dielectric barrier from a direct discharge from the other electrode, the unshielded electrode and the dielectric barrier forming an annular volume in which self-terminating microdischarges occur when alternating high voltage is applied to the center electrode. The large area over which the discharges occur, and the large number of possible discharges within the period of an engine cycle, make the present silent discharge plasma spark plug suitable for use as an ignition source for engines. In the situation, where a single discharge is effective in causing ignition of the combustible gases, a conventional single-polarity, single-pulse, spark plug voltage supply may be used.

  14. Masked target transform volume clutter metric applied to vehicle search

    NASA Astrophysics Data System (ADS)

    Moore, Richard K.; Camp, H. A.; Moyer, Steve; Halford, Carl E.

    2010-04-01

    The Night Vision and Electronic Sensors Directorate's current time-limited search model, which makes use of the targeting task performance (TTP) metric to describe imager quality, does not explicitly account for the effects of clutter on observer performance. The masked target transform volume (MTTV) clutter metric has been presented previously, but is first applied to the results of a vehicle search perception experiment with simulated thermal imagery here. NVESD's Electro-Optical Simulator program was used to generate hundreds of synthetic images of tracked vehicles hidden in a rural environment. 12 observers searched for the tracked vehicles and their performance is compared to the MTTV clutter level, signal-to-clutter ratios using several clutter metrics from open literature, and to the product of target size and contrast. The investigated clutter metrics included the Schmeider-Weathersby statistical variance, Silk's statistical variance, Aviram's probability of edge detection metric, and Chang's target structural similarity metric. The MTTV was shown to better model observer performance as measured by the perception experiment than any of the other compared metrics, including the product of target size and contrast.

  15. Functional magnetic resonance imaging for defining the biological target volume

    PubMed Central

    Kauczor, Hans-Ulrich; Zechmann, Christian; Stieltjes, Bram; Weber, Marc-Andre

    2006-01-01

    Morphology as demonstrated by CT is the basis for radiotherapy planning. Intensity-modulated and adaptive radiotherapy techniques would greatly benefit from additional functional information allowing for definition of the biological target volume. MRI techniques include several which can characterize and quantify different tissue properties and their tumour-related changes. Results of perfusion MRI represent microvascular density and permeability; MR spectroscopy depicts particular metabolites; diffusion weighted imaging shows tissue at risk and tumour cellularity; while dynamic 3D acquisition (4D MRI) shows organ motion and the mobility of tumours within them. PMID:16766269

  16. Spatial considerations during cryopreservation of a large volume sample.

    PubMed

    Kilbride, Peter; Lamb, Stephen; Milne, Stuart; Gibbons, Stephanie; Erro, Eloy; Bundy, James; Selden, Clare; Fuller, Barry; Morris, John

    2016-08-01

    There have been relatively few studies on the implications of the physical conditions experienced by cells during large volume (litres) cryopreservation - most studies have focused on the problem of cryopreservation of smaller volumes, typically up to 2 ml. This study explores the effects of ice growth by progressive solidification, generally seen during larger scale cryopreservation, on encapsulated liver hepatocyte spheroids, and it develops a method to reliably sample different regions across the frozen cores of samples experiencing progressive solidification. These issues are examined in the context of a Bioartificial Liver Device which requires cryopreservation of a 2 L volume in a strict cylindrical geometry for optimal clinical delivery. Progressive solidification cannot be avoided in this arrangement. In such a system optimal cryoprotectant concentrations and cooling rates are known. However, applying these parameters to a large volume is challenging due to the thermal mass and subsequent thermal lag. The specific impact of this to the cryopreservation outcome is required. Under conditions of progressive solidification, the spatial location of Encapsulated Liver Spheroids had a strong impact on post-thaw recovery. Cells in areas first and last to solidify demonstrated significantly impaired post-thaw function, whereas areas solidifying through the majority of the process exhibited higher post-thaw outcome. It was also found that samples where the ice thawed more rapidly had greater post-thaw viability 24 h post-thaw (75.7 ± 3.9% and 62.0 ± 7.2% respectively). These findings have implications for the cryopreservation of large volumes with a rigid shape and for the cryopreservation of a Bioartificial Liver Device. PMID:27256662

  17. Ray Casting of Large Multi-Resolution Volume Datasets

    NASA Astrophysics Data System (ADS)

    Lux, C.; Fröhlich, B.

    2009-04-01

    High quality volume visualization through ray casting on graphics processing units (GPU) has become an important approach for many application domains. We present a GPU-based, multi-resolution ray casting technique for the interactive visualization of massive volume data sets commonly found in the oil and gas industry. Large volume data sets are represented as a multi-resolution hierarchy based on an octree data structure. The original volume data is decomposed into small bricks of a fixed size acting as the leaf nodes of the octree. These nodes are the highest resolution of the volume. Coarser resolutions are represented through inner nodes of the hierarchy which are generated by down sampling eight neighboring nodes on a finer level. Due to limited memory resources of current desktop workstations and graphics hardware only a limited working set of bricks can be locally maintained for a frame to be displayed. This working set is chosen to represent the whole volume at different local resolution levels depending on the current viewer position, transfer function and distinct areas of interest. During runtime the working set of bricks is maintained in CPU- and GPU memory and is adaptively updated by asynchronously fetching data from external sources like hard drives or a network. The CPU memory hereby acts as a secondary level cache for these sources from which the GPU representation is updated. Our volume ray casting algorithm is based on a 3D texture-atlas in GPU memory. This texture-atlas contains the complete working set of bricks of the current multi-resolution representation of the volume. This enables the volume ray casting algorithm to access the whole working set of bricks through only a single 3D texture. For traversing rays through the volume, information about the locations and resolution levels of visited bricks are required for correct compositing computations. We encode this information into a small 3D index texture which represents the current octree

  18. AdS/CFT and Large-N Volume Independence

    SciTech Connect

    Poppitz, Erich; Unsal, Mithat; /SLAC /Stanford U., Phys. Dept.

    2010-08-26

    We study the Eguchi-Kawai reduction in the strong-coupling domain of gauge theories via the gravity dual of N=4 super-Yang-Mills on R{sup 3} x S{sup 1}. We show that D-branes geometrize volume independence in the center-symmetric vacuum and give supergravity predictions for the range of validity of reduced large-N models at strong coupling.

  19. Large volume multiple-path nuclear pumped laser

    SciTech Connect

    Hohl, F.; Deyoung, R.J.

    1981-11-01

    Large volumes of gas are excited by using internal high reflectance mirrors that are arranged so that the optical path crosses back and forth through the excited gaseous medium. By adjusting the external dielectric mirrors of the laser, the number of paths through the laser cavity can be varied. Output powers were obtained that are substantially higher than the output powers of previous nuclear laser systems. Official Gazette of the U.S. Patent and Trademark Office

  20. Staged-volume radiosurgery for large arteriovenous malformations: a review.

    PubMed

    AlKhalili, Kenan; Chalouhi, Nohra; Tjoumakaris, Stavropoula; Rosenwasser, Robert; Jabbour, Pascal

    2014-09-01

    Stereotactic radiosurgery is an effective management strategy for properly selected patients with arteriovenous malformations (AVMs). However, the risk of postradiosurgical radiation-related injury is higher in patients with large AVMs. Multistaged volumetric management of large AVMs was undertaken to limit the radiation exposure to the surrounding normal brain. This strategy offers a promising method for obtaining high AVM obliteration rates with minimal normal tissue damage. The use of embolization as an adjunctive method in the treatment of large AVMs remains controversial. Unfortunately, staged-volume radiosurgery (SVR) has a number of potential pitfalls that affect the outcome. The aim of this article is to highlight the role of SVR in the treatment of large AVMs, to discuss the outcome comparing it to other treatment modalities, and to discuss the potential improvement that could be introduced to this method of treatment. PMID:25175440

  1. Parallel Rendering of Large Time-Varying Volume Data

    NASA Technical Reports Server (NTRS)

    Garbutt, Alexander E.

    2005-01-01

    Interactive visualization of large time-varying 3D volume datasets has been and still is a great challenge to the modem computational world. It stretches the limits of the memory capacity, the disk space, the network bandwidth and the CPU speed of a conventional computer. In this SURF project, we propose to develop a parallel volume rendering program on SGI's Prism, a cluster computer equipped with state-of-the-art graphic hardware. The proposed program combines both parallel computing and hardware rendering in order to achieve an interactive rendering rate. We use 3D texture mapping and a hardware shader to implement 3D volume rendering on each workstation. We use SGI's VisServer to enable remote rendering using Prism's graphic hardware. And last, we will integrate this new program with ParVox, a parallel distributed visualization system developed at JPL. At the end of the project, we Will demonstrate remote interactive visualization using this new hardware volume renderer on JPL's Prism System using a time-varying dataset from selected JPL applications.

  2. Large volume high-pressure cell for inelastic neutron scattering.

    PubMed

    Wang, W; Sokolov, D A; Huxley, A D; Kamenev, K V

    2011-07-01

    Inelastic neutron scattering measurements typically require two orders of magnitude longer data collection times and larger sample sizes than neutron diffraction studies. Inelastic neutron scattering measurements on pressurised samples are particularly challenging since standard high-pressure apparatus restricts sample volume, attenuates the incident and scattered beams, and contributes background scattering. Here, we present the design of a large volume two-layered piston-cylinder pressure cell with optimised transmission for inelastic neutron scattering experiments. The design and the materials selected for the construction of the cell enable its safe use to a pressure of 1.8 GPa with a sample volume in excess of 400 mm(3). The design of the piston seal eliminates the need for a sample container, thus providing a larger sample volume and reduced absorption. The integrated electrical plug with a manganin pressure gauge offers an accurate measurement of pressure over the whole range of operational temperatures. The performance of the cell is demonstrated by an inelastic neutron scattering study of UGe(2). PMID:21806195

  3. Optimized Planning Target Volume for Intact Cervical Cancer

    SciTech Connect

    Khan, Alvin; Jensen, Lindsay G.; Sun Shuai; Song, William Y.; Yashar, Catheryn M.; Mundt, Arno J.; Zhang Fuquan; Jiang, Steve B.; Mell, Loren K.

    2012-08-01

    Purpose: To model interfraction clinical target volume (CTV) variation in patients with intact cervical cancer and design a planning target volume (PTV) that minimizes normal tissue dose while maximizing CTV coverage. Methods and Materials: We analyzed 50 patients undergoing external-beam radiotherapy for intact cervical cancer using daily online cone-beam computed tomography (CBCT). The CBCTs (n = 972) for each patient were rigidly registered to the planning CT. The CTV was delineated on the planning CT (CTV{sub 0}) and the set of CBCTs ({l_brace}CTV{sub 1}-CTV{sub 25}{r_brace}). Manual (n = 98) and automated (n = 668) landmarks were placed over the surface of CTV{sub 0} with reference to defined anatomic structures. Normal vectors were extended from each landmark, and the minimum length required for a given probability of encompassing CTV{sub 1}-CTV{sub 25} was computed. The resulting expansions were used to generate an optimized PTV. Results: The mean (SD; range) normal vector length to ensure 95% coverage was 4.3 mm (2.7 mm; 1-16 mm). The uniform expansion required to ensure 95% probability of CTV coverage was 13 mm. An anisotropic margin of 20 mm anteriorly and posteriorly and 10 mm superiorly, inferiorly, and laterally also would have ensured a 95% probability of CTV coverage. The volume of the 95% optimized PTV (1470 cm{sup 3}) was significantly lower than both the anisotropic PTV (2220 cm{sup 3}) and the uniformly expanded PTV (2110 cm{sup 3}) (p < 0.001). For a 95% probability of CTV coverage, normal lengths of 1-3 mm were found along the superior and lateral regions of CTV{sub 0}, 5-10 mm along the interfaces of CTV{sub 0} with the bladder and rectum, and 10-14 mm along the anterior surface of CTV{sub 0} at the level of the uterus. Conclusion: Optimizing PTV definition according to surface landmarking resulted in a high probability of CTV coverage with reduced PTV volumes. Our results provide data justifying planning margins to use in practice and

  4. [Gross tumor volume (GTV) and clinical target volume (CTV) in radiotherapy of benign skull base tumors].

    PubMed

    Maire, J P; Liguoro, D; San Galli, F

    2001-10-01

    Skull base tumours represent about 35 to 40% of all intracranial tumours. There are now many reports in the literature confirming the fact that about 80 to 90% of such tumours are controlled with fractionated radiotherapy. Stereotactic and 3-dimensional treatment planning techniques increase local control and central nervous system tolerance. Definition of the gross tumor volume (GTV) is generally easy with currently available medical imaging systems and computers for 3-dimensional dosimetry. The definition of the clinical target volume (CTV) is more difficult to appreciate; it is defined from the CTV plus a margin, which depends on the histology and anterior therapeutic history of the tumour. It is important to take into account the visible tumour and its possible extension pathways (adjacent bone, holes at the base of skull) and/or an anatomic region (sella turcica + adjacent cavernous sinus). It is necessary to evaluate these volumes with CT Scan and MRI to appreciate tumor extension in a 3-dimentional approach, in order to reduce the risk of marginal recurrences. The aim of this paper is to discuss volume definition as a function of tumour site and tumour type to be irradiated. PMID:11715310

  5. Construction of an unyielding target for large horizontal impacts.

    SciTech Connect

    Ammerman, Douglas James; Davie, Neil Thomas; Kalan, Robert J.

    2010-10-01

    Sandia National Laboratories has constructed an unyielding target at the end of its 2000-foot rocket sled track. This target is made up of approximately 5 million pounds of concrete, an embedded steel load spreading structure, and a steel armor plate face that varies from 10 inches thick at the center to 4 inches thick at the left and right edges. The target/track combination will allow horizontal impacts at regulatory speeds of very large objects, such as a full-scale rail cask, or high-speed impacts of smaller packages. The load-spreading mechanism in the target is based upon the proven design that has been in use for over 20 years at Sandia's aerial cable facility. That target, with a weight of 2 million pounds, has successfully withstood impact forces of up to 25 million pounds. It is expected that the new target will be capable of withstanding impact forces of more than 70 million pounds. During construction various instrumentation was placed in the target so that the response of the target during severe impacts can be monitored. This paper will discuss the construction of the target and provide insights on the testing capabilities at the sled track with this new target.

  6. Geometric Measures of Large Biomolecules: Surface, Volume and Pockets

    PubMed Central

    Mach, Paul; Koehl, Patrice

    2011-01-01

    Geometry plays a major role in our attempt to understand the activity of large molecules. For example, surface area and volume are used to quantify the interactions between these molecules and the water surrounding them in implicit solvent models. In addition, the detection of pockets serves as a starting point for predictive studies of biomolecule-ligand interactions. The alpha shape theory provides an exact and robust method for computing these geometric measures. Several implementations of this theory are currently available. We show however that these implementations fail on very large macromolecular systems. We show that these difficulties are not theoretical; rather, they are related to the architecture of current computers that rely on the use of cache memory to speed up calculation. By rewriting the algorithms that implement the different steps of the alpha shape theory such that we enforce locality, we show that we can remediate these cache problems; the corresponding code, UnionBall has an apparent (n) behavior over a large range of values of n (up to tens of millions), where n is the number of atoms. As an example, it takes 136 seconds with UnionBall to compute the contribution of each atom to the surface area and volume of a viral capsid with more than five million atoms on a commodity PC. UnionBall includes functions for computing the surface area and volume of the intersection of two, three and four spheres that are fully detailed in an appendix. UnionBall is available as an OpenSource software. PMID:21823134

  7. Effect of large volume paracentesis on plasma volume--a cause of hypovolemia

    SciTech Connect

    Kao, H.W.; Rakov, N.E.; Savage, E.; Reynolds, T.B.

    1985-05-01

    Large volume paracentesis, while effectively relieving symptoms in patients with tense ascites, has been generally avoided due to reports of complications attributed to an acute reduction in intravascular volume. Measurements of plasma volume in these subjects have been by indirect methods and have not uniformly confirmed hypovolemia. We have prospectively evaluated 18 patients (20 paracenteses) with tense ascites and peripheral edema due to chronic liver disease undergoing 5 liter paracentesis for relief of symptoms. Plasma volume pre- and postparacentesis was assessed by a /sup 125/I-labeled human serum albumin dilution technique as well as by the change in hematocrit and postural blood pressure difference. No significant change in serum sodium, urea nitrogen, hematocrit or postural systolic blood pressure difference was noted at 24 or 48 hr after paracentesis. Serum creatinine at 24 hr after paracentesis was unchanged but a small but statistically significant increase in serum creatinine was noted at 48 hr postparacentesis. Plasma volume changed -2.7% (n = 6, not statistically significant) during the first 24 hr and -2.8% (n = 12, not statistically significant) during the 0- to 48-hr period. No complications from paracentesis were noted. These results suggest that 5 liter paracentesis for relief of symptoms is safe in patients with tense ascites and peripheral edema from chronic liver disease.

  8. Large volume loss during cleavage formation, Hamburg sequence, Pennsylvania

    NASA Astrophysics Data System (ADS)

    Beutner, Edward C.; Charles, Emmanuel G.

    1985-11-01

    Green reduction spots in red slate of the Hamburg sequence exposed near Shartlesville, Pennsylvania, have axial ratios of 1.42:1.0:0.28 on the limbs of near-isoclinal folds and 1.0:0.79:0.41 in fold hinge zones. Conodont cusps and denticles within the reduction spots have been brittlely pulled apart and give independent measures of extension in various directions. Comparison of conodont extensions with reduction spot shapes on limbs and hinges indicates that sedimentary compaction of 44% preceded the tectonic strain associated with cleavage formation. This strain, having identical maximum extensions but greater shortening in fold hinges as compared to limbs, was characterized by 41% extension in X, no change in Y, 50% to 59% shortening in Z, and 29% to 42% tectonic volume loss. The general lack of directed overgrowths on grains reflects the large volume loss and contrasts with other slates, where deformation was an almost constant volume process and extension in X compensated for shortening in Z. *Present address: Department of Geology, Miami University, Oxford, Ohio 45056

  9. Efficient Large Volume Lentiviral Vector Production Using Flow Electroporation

    PubMed Central

    Witting, Scott R.; Li, Lin-Hong; Jasti, Aparna; Allen, Cornell; Cornetta, Kenneth; Brady, James; Shivakumar, Rama

    2012-01-01

    Abstract Lentiviral vectors are beginning to emerge as a viable choice for human gene therapy. Here, we describe a method that combines the convenience of a suspension cell line with a scalable, nonchemically based, and GMP-compliant transfection technique known as flow electroporation (EP). Flow EP parameters for serum-free adapted HEK293FT cells were optimized to limit toxicity and maximize titers. Using a third generation, HIV-based, lentiviral vector system pseudotyped with the vesicular stomatitis glycoprotein envelope, both small- and large-volume transfections produced titers over 1×108 infectious units/mL. Therefore, an excellent option for implementing large-scale, clinical lentiviral productions is flow EP of suspension cell lines. PMID:21933028

  10. Analysis of volume holographic storage allowing large-angle illumination

    NASA Astrophysics Data System (ADS)

    Shamir, Joseph

    2005-05-01

    Advanced technological developments have stimulated renewed interest in volume holography for applications such as information storage and wavelength multiplexing for communications and laser beam shaping. In these and many other applications, the information-carrying wave fronts usually possess narrow spatial-frequency bands, although they may propagate at large angles with respect to each other or a preferred optical axis. Conventional analytic methods are not capable of properly analyzing the optical architectures involved. For mitigation of the analytic difficulties, a novel approximation is introduced to treat narrow spatial-frequency band wave fronts propagating at large angles. This approximation is incorporated into the analysis of volume holography based on a plane-wave decomposition and Fourier analysis. As a result of the analysis, the recently introduced generalized Bragg selectivity is rederived for this more general case and is shown to provide enhanced performance for the above indicated applications. The power of the new theoretical description is demonstrated with the help of specific examples and computer simulations. The simulations reveal some interesting effects, such as coherent motion blur, that were predicted in an earlier publication.

  11. Small-x parton distributions of large hadronic targets

    NASA Astrophysics Data System (ADS)

    Hebecker, A.; Weigert, H.

    1998-07-01

    A simple and intuitive calculation, based on the semiclassical approximation, demonstrates how the large size of a hadronic target introduces a new perturbative scale into the process of small-x deep inelastic scattering. The above calculation, which is performed in the target rest frame, is compared to the McLerran-Venugopalan model for scattering off large nuclei, which has first highlighted this effect in the infinite momentum frame. It is shown that the two approaches, i.e., the rest frame based semiclassical calculation and the infinite momentum frame based McLerran-Venugopalan approach are quantitatively consistent.

  12. Toward large-area targets for “TRAKULA”

    NASA Astrophysics Data System (ADS)

    Vascon, A.; Düllmann, Ch. E.; Eberhardt, K.; Kindler, B.; Lommel, B.; Runke, J.

    2011-11-01

    TRAKULA ( Transmutationsrelevante kernphysikalische Untersuchungen langlebiger Aktinide, i.e., nuclear physical investigations of long-lived actinides with relevance to transmutation) is a joint research project of the German Federal Ministry of Science and Education (BMBF) on nuclear physics investigations with modern scientific, technological and numerical methods. Experiments concerning the transmutation of radioactive waste are a central topic of the project. For this, large-area samples (≥40 cm 2) of 235,238U and 239,242Pu compounds are required for the calibration of fission chambers and for fission yield measurements. Another topic within the project requires large-area targets for precise measurements of the half-life, t1/2, of very long-lived α-particle emitters like 144Nd ( t1/2≈2×10 15 y). Here, we report on electrodeposition tests with Gd and Nd (used as chemical homologs of the actinides), which were performed to find optimal deposition conditions for small-area targets that should be applicable to future large-area targets. The layers were produced by molecular plating. A new stirring technique, ultrasonic stirring, was adopted and found to be suitable for producing large-area targets. Moreover, two different current densities (namely 0.7 and 1.4 mA/cm 2) were studied and found appropriate for target preparation. Characterization of the layers with different analytical techniques played a major role in these studies to gain a deeper understanding of the deposition process itself: neutron activation analysis and γ-spectroscopy were used for yield measurements, radiographic imaging for homogeneity studies, scanning electron microscopy for morphology studies, and atomic force microscopy for roughness studies. According to the obtained results, a new electrochemical cell for the production of large-area targets was designed.

  13. Large-scale optimal sensor array management for target tracking

    NASA Astrophysics Data System (ADS)

    Tharmarasa, Ratnasingham; Kirubarajan, Thiagalingam; Hernandez, Marcel L.

    2004-01-01

    Large-scale sensor array management has applications in a number of target tracking problems. For example, in ground target tracking, hundreds or even thousands of unattended ground sensors (UGS) may be dropped over a large surveillance area. At any one time it may then only be possible to utilize a very small number of the available sensors at the fusion center because of bandwidth limitations. A similar situation may arise in tracking sea surface or underwater targets using a large number of sonobuoys. The general problem is then to select a subset of the available sensors in order to optimize tracking performance. The Posterior Cramer-Rao Lower Bound (PCRLB), which quantifies the obtainable accuracy of target state estimation, is used as the basis for network management. In a practical scenario with even hundreds of sensors, the number of possible sensor combinations would make it impossible to enumerate all possibilities in real-time. Efficient local (or greedy) search techniques must then be used to make the computational load manageable. In this paper we introduce an efficient search strategy for selecting a subset of the sensor array for use during each sensor change interval in multi-target tracking. Simulation results illustrating the performance of the sensor array manager are also presented.

  14. Large-scale optimal sensor array management for target tracking

    NASA Astrophysics Data System (ADS)

    Tharmarasa, Ratnasingham; Kirubarajan, Thiagalingam; Hernandez, Marcel L.

    2003-12-01

    Large-scale sensor array management has applications in a number of target tracking problems. For example, in ground target tracking, hundreds or even thousands of unattended ground sensors (UGS) may be dropped over a large surveillance area. At any one time it may then only be possible to utilize a very small number of the available sensors at the fusion center because of bandwidth limitations. A similar situation may arise in tracking sea surface or underwater targets using a large number of sonobuoys. The general problem is then to select a subset of the available sensors in order to optimize tracking performance. The Posterior Cramer-Rao Lower Bound (PCRLB), which quantifies the obtainable accuracy of target state estimation, is used as the basis for network management. In a practical scenario with even hundreds of sensors, the number of possible sensor combinations would make it impossible to enumerate all possibilities in real-time. Efficient local (or greedy) search techniques must then be used to make the computational load manageable. In this paper we introduce an efficient search strategy for selecting a subset of the sensor array for use during each sensor change interval in multi-target tracking. Simulation results illustrating the performance of the sensor array manager are also presented.

  15. A precision translation stage for reproducing measured target volume motions.

    PubMed

    Litzenberg, Dale W; Hadley, Scott W; Lam, Kwok L; Balter, James M

    2007-01-01

    The development of 4D imaging, treatment planning and treatment delivery methods for radiation therapy require the use of a high-precision translation stage for testing and validation. These technologies may require spatial resolutions of 1 mm, and temporal resolutions of 2-30 Hz for CT imaging, electromagnetic tracking, and fluoroscopic imaging. A 1D programmable translation stage capable of reproducing idealized and measured anatomic motions common to the thorax has been design and built to meet these spatial and temporal resolution requirement with phantoms weighing up to 27 kg. The stage consists of a polycarbonate base and table, driven by an AC servo motor with encoder feedback by means of a belt-coupled precision screw. Complex motions are possible through a programmable motion controller that is capable of running multiple independent control and monitoring programs concurrently. Programmable input and output ports allow motion to be synchronized with beam delivery and other imaging and treatment delivery devices to within 2.0 ms. Average deviations from the programmed positions are typically 0.2 mm or less, while the average typical maximum positional errors are typically 0.5 mm for an indefinite number of idealized breathing motion cycles and while reproducing measured target volume motions for several minutes. PMID:17712294

  16. Cryogenic control system of the large COMPASS polarized target

    NASA Astrophysics Data System (ADS)

    Gautheron, F.; Ball, J.; Baum, G.; Berglund, P.; Doshita, N.; Goertz, St.; Gustafsson, K.; Horikawa, N.; Kisselev, Y.; Koivuniemi, J.; Kondo, K.; Meyer, W.; Reicherz, G.

    2004-06-01

    The dilution refrigerator used to cool the large COMPASS polarized target is monitored through a PC running LabVIEW TM 6.1 under Windows 2000 TM. About 60 parameters of the target (temperatures, pressures, flow rates) are continuously plotted and checked. They are periodically recorded in an Oracle TM database and in a data file. An alarm for every parameter can be individually activated and optionally connected to a GSM (Global System for Mobile Communication) delivery message system. A web server receives and publishes the online status of the target with online tables and graphics on a dedicated COMPASS polarized target information web site. A Siemens programmable logic controller (PLC) powered by an uninterruptable source keeps the cryogenic system safe and stable during the long beam periods by controlling valves and interlocks. This safety feature protects the dilution refrigerator against potential damages in case of power failure.

  17. SUSY’s Ladder: Reframing sequestering at Large Volume

    DOE PAGESBeta

    Reece, Matthew; Xue, Wei

    2016-04-07

    Theories with approximate no-scale structure, such as the Large Volume Scenario, have a distinctive hierarchy of multiple mass scales in between TeV gaugino masses and the Planck scale, which we call SUSY's Ladder. This is a particular realization of Split Supersymmetry in which the same small parameter suppresses gaugino masses relative to scalar soft masses, scalar soft masses relative to the gravitino mass, and the UV cutoff or string scale relative to the Planck scale. This scenario has many phenomenologically interesting properties, and can avoid dangers including the gravitino problem, flavor problems, and the moduli-induced LSP problem that plague othermore » supersymmetric theories. We study SUSY's Ladder using a superspace formalism that makes the mysterious cancelations in previous computations manifest. This opens the possibility of a consistent effective field theory understanding of the phenomenology of these scenarios, based on power-counting in the small ratio of string to Planck scales. We also show that four-dimensional theories with approximate no-scale structure enforced by a single volume modulus arise only from two special higher-dimensional theories: five-dimensional supergravity and ten-dimensional type IIB supergravity. As a result, this gives a phenomenological argument in favor of ten dimensional ultraviolet physics which is different from standard arguments based on the consistency of superstring theory.« less

  18. Large volume water sprays for dispersing warm fogs

    NASA Astrophysics Data System (ADS)

    Keller, V. W.; Anderson, B. J.; Burns, R. A.; Lala, G. G.; Meyer, M. B.

    A new method for dispersing of warm fogs which impede visibility and alter schedules is described. The method uses large volume recycled water sprays to create curtains of falling drops through which the fog is processed by the ambient wind and spray-induced air flow; the fog droplets are removed by coalescence/rainout. The efficiency of this fog droplet removal process depends on the size spectra of the spray drops and optimum spray drop size is calculated as between 0.3-1.0 mm in diameter. Water spray tests were conducted in order to determine the drop size spectra and temperature response of sprays produced by commercially available fire-fighting nozzles, and nozzle array tests were utilized to study air flow patterns and the thermal properties of the overall system. The initial test data reveal that the fog-dispersal procedure is effective.

  19. Large space telescope, phase A. Volume 1: Executive summary

    NASA Technical Reports Server (NTRS)

    1972-01-01

    The Phase A study of the Large Space Telescope (LST) is reported. The study defines an LST concept based on the broad mission guidelines provided by the Office of Space Science (OSS), the scientific requirements developed by OSS with the scientific community, and an understanding of long range NASA planning current at the time the study was performed. The LST is an unmanned astronomical observatory facility, consisting of an optical telescope assembly (OTA), scientific instrument package (SIP), and a support systems module (SSM). The report consists of five volumes. The report describes the constraints and trade off analyses that were performed to arrive at a reference design for each system and for the overall LST configuration. A low cost design approach was followed in the Phase A study. This resulted in the use of standard spacecraft hardware, the provision for maintenance at the black box level, growth potential in systems designs, and the sharing of shuttle maintenance flights with other payloads.

  20. Large volume water sprays for dispersing warm fogs

    NASA Technical Reports Server (NTRS)

    Keller, V. W.; Anderson, B. J.; Burns, R. A.; Lala, G. G.; Meyer, M. B.

    1986-01-01

    A new method for dispersing of warm fogs which impede visibility and alter schedules is described. The method uses large volume recycled water sprays to create curtains of falling drops through which the fog is processed by the ambient wind and spray-induced air flow; the fog droplets are removed by coalescence/rainout. The efficiency of this fog droplet removal process depends on the size spectra of the spray drops and optimum spray drop size is calculated as between 0.3-1.0 mm in diameter. Water spray tests were conducted in order to determine the drop size spectra and temperature response of sprays produced by commercially available fire-fighting nozzles, and nozzle array tests were utilized to study air flow patterns and the thermal properties of the overall system. The initial test data reveal that the fog-dispersal procedure is effective.

  1. Striped Bass, morone saxatilis, egg incubation in large volume jars

    USGS Publications Warehouse

    Harper, C.J.; Wrege, B.M.; Jeffery, Isely J.

    2010-01-01

    The standard McDonald jar was compared with a large volume jar for striped bass, Morone saxatilis, egg incubation. The McDonald jar measured 16 cm in diameter by 45 cm in height and had a volume of 6 L. The experimental jar measured 0.4 m in diameter by 1.3 m in height and had a volume of 200 L. The hypothesis is that there is no difference in percent survival of fry hatched in experimental jars compared with McDonald jars. Striped bass brood fish were collected from the Coosa River and spawned using the dry spawn method of fertilization. Four McDonald jars were stocked with approximately 150 g of eggs each. Post-hatch survival was estimated at 48, 96, and 144 h. Stocking rates resulted in an average egg loading rate (??1 SE) in McDonald jars of 21.9 ?? 0.03 eggs/mL and in experimental jars of 10.9 ?? 0.57 eggs/mL. The major finding of this study was that average fry survival was 37.3 ?? 4.49% for McDonald jars and 34.2 ?? 3.80% for experimental jars. Although survival in experimental jars was slightly less than in McDonald jars, the effect of container volume on survival to 48 h (F = 6.57; df = 1,5; P > 0.05), 96 h (F = 0.02; df = 1, 4; P > 0.89), and 144 h (F = 3.50; df = 1, 4; P > 0.13) was not statistically significant. Mean survival between replicates ranged from 14.7 to 60.1% in McDonald jars and from 10.1 to 54.4% in experimental jars. No effect of initial stocking rate on survival (t = 0.06; df = 10; P > 0.95) was detected. Experimental jars allowed for incubation of a greater number of eggs in less than half the floor space of McDonald jars. As hatchery production is often limited by space or water supply, experimental jars offer an alternative to extending spawning activities, thereby reducing labor and operations cost. As survival was similar to McDonald jars, the experimental jar is suitable for striped bass egg incubation. ?? Copyright by the World Aquaculture Society 2010.

  2. [Gross tumor volume (GTV) and clinical target volume (CTV) in adult gliomas].

    PubMed

    Kantor, G; Loiseau, H; Vital, A; Mazeron, J J

    2001-10-01

    Glioblastoma multiform and astrocytoma are the most frequent primary cancer of the central nervous system of adult. Definitions of gross tumor volume (GTV) and clinical target volume (CTV) are based on the confrontation of clinical presentation (age, performance status, neurologic symptoms...), histological type and imaging aspects. For glioblastoma multiform, the GTV can be defined by the area of contrast enhancement observed on the CT scan or MRI. Definition of the CTV can be more difficult and have to take into account the risk of presence of isolated malignant cells in the oedema surrounding the tumor or in the adjacent brain structures. The classical concept of GTV plus a safety margin of 2 cm around is discussed with a CTV containing at least all the oedematous area and eventually adjacent brain structures (nuclei, corpus callosum or other long associative fibers...). For low grade astrocytoma, the definition of GTV can be difficult if the tumoral infiltration is diffuse without nodular visible tumor. CTV corresponds to at least T2 MRI hypersignal area when visible. For postoperative tumor, technical considerations are important for the detection of residual tumor. A safety margin around the resected area is designed according to the risk of presence of isolated cells or involvement of adjacent brain structures. PMID:11715309

  3. Volume visualization of multiple alignment of large genomicDNA

    SciTech Connect

    Shah, Nameeta; Dillard, Scott E.; Weber, Gunther H.; Hamann, Bernd

    2005-07-25

    Genomes of hundreds of species have been sequenced to date, and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these massive ''billion basepair DNA sequences'' becomes substantial, so does the need for more powerful tools supporting the exploration of these data sets. Similarity score data used to compare aligned DNA sequences is inherently one-dimensional. One-dimensional (1D) representations of these data sets do not effectively utilize screen real estate. As a result, tools using 1D representations are incapable of providing informatory overview for extremely large data sets. We present a technique to arrange 1D data in 3D space to allow us to apply state-of-the-art interactive volume visualization techniques for data exploration. We demonstrate our technique using multi-millions-basepair-long aligned DNA sequence data and compare it with traditional 1D line plots. The results show that our technique is superior in providing an overview of entire data sets. Our technique, coupled with 1D line plots, results in effective multi-resolution visualization of very large aligned sequence data sets.

  4. Successful pregnancies with directional freezing of large volume buck semen.

    PubMed

    Gacitua, H; Arav, A

    2005-02-01

    Artificial insemination with frozen-thawed buck semen shows variable results which depend on many factors related to semen quality and the cryopreservation processing. We conducted experiments based on a new freezing method, directional freezing, of large volumes (8 ml). In the first experiment semen from three Saanen bucks, ages 1-2-years-old and genetically selected for milk improvement, was frozen individually. Two to three-years-old Saanen females (n = 164) were synchronized with controlled internal drug release (CIDR), pregnant mare serum gonadotrophin (PMSG) and prostaglandin. Double cervical inseminations were performed with frozen-thawed semen and fresh semen as control. In the second experiment we used pooled, washed frozen semen to examine the effect of washed seminal plasma. The motility after washing was 80-90% and after thawing was 55-65% for all bucks. The sperm concentration increased with the collections and the advance into the breeding season from 1.9 x 10(9) to 4.4 x 10(9) cell/ml average. Two inseminations were carried out at 8h intervals. The first insemination was performed at 32 h after CIDR withdrawal with fresh and frozen-thawed semen. Pregnancy rates were assessed by ultrasonography conducted 40 and 90 days post-insemination (from three bucks). Results were 58, 67, 50% with fresh semen, and for frozen semen were 33, 37 and 53%; these results were significantly different in one of the three bucks (P < 0.005). In the second experiment with pooled, washed semen the pregnancy rate was 41.6%, which compared with the average results of the frozen semen in the first experiment 38.9% no significant difference was found. We conclude that freezing buck semen in large volumes (8 ml) is possible. Cryobanking of buck semen will facilitate a genetic breeding program in goats and preservation of biodiversity. Washed semen did not improve the fertility of the semen when Andromed bull extender is used. PMID:15629809

  5. A large volume flat coil probe for oriented membrane proteins.

    PubMed

    Gor'kov, Peter L; Chekmenev, Eduard Y; Fu, Riqiang; Hu, Jun; Cross, Timothy A; Cotten, Myriam; Brey, William W

    2006-07-01

    15N detection of mechanically aligned membrane proteins benefits from large sample volumes that compensate for the low sensitivity of the observe nuclei, dilute sample preparation, and for the poor filling factor arising from the presence of alignment plates. Use of larger multi-tuned solenoids, however, is limited by wavelength effects that lead to inhomogeneous RF fields across the sample, complicating cross-polarization experiments. We describe a 600 MHz 15N-1H solid-state NMR probe with large (580 mm3) RF solenoid for high-power, multi-pulse sequence experiments, such as polarization inversion spin exchange at the magic angle (PISEMA). In order to provide efficient detection for 15N, a 4-turn solenoidal sample coil is used that exceeds 0.27 lambda at the 600 MHz 1H resonance. A balanced tuning-matching circuit is employed to preserve RF homogeneity across the sample for adequate magnetization transfer from 1H to 15N. We describe a procedure for optimization of the shorted 1/4 lambda coaxial trap that allows for the sufficiently strong RF fields in both 1H and 15N channels to be achieved within the power limits of 300 W 1H and 1 kW 15N amplifiers. The 8 x 6 x 12 mm solenoid sustains simultaneous B1 irradiation of 100 kHz at 1H frequency and 51 kHz at 15N frequency for at least 5 ms with 265 and 700 W of input power in the respective channels. The probe functionality is demonstrated by 2D 15N-1H PISEMA spectroscopy for two applications at 600 MHz. PMID:16580852

  6. Novel multi-slit large-volume air sampler.

    PubMed

    Buchanan, L M; Decker, H M; Frisque, D E; Phillips, C R; Dahlgren, C M

    1968-08-01

    Scientific investigators who are interested in the various facets of airborne transmission of disease in research laboratories and hospitals need a simple, continuous, high-volume sampling device that will recover a high percentage of viable microorganisms from the atmosphere. Such a device must sample a large quantity of air. It should effect direct transfer of the air into an all-purpose liquid medium in order to collect bacteria, viruses, rickettsia, and fungi, and it should be easy to use. A simple multi-slit impinger sampler that fulfills these requirements has been developed. It operates at an air-sampling rate of 500 liters/min, has a high collection efficiency, functions at a low pressure drop, and, in contrast to some earlier instruments, does not depend upon electrostatic precipitation at high voltages. When compared to the all-glass impinger, the multi-slit impinger sampler collected microbial aerosols of Serratia marcescens at 82% efficiency, and aerosols of Bacillus subtilis var. niger at 78% efficiency. PMID:4970892

  7. New Large Volume Press Beamlines at the Canadian Light Source

    NASA Astrophysics Data System (ADS)

    Mueller, H. J.; Hormes, J.; Lauterjung, J.; Secco, R.; Hallin, E.

    2013-12-01

    The Canadian Light Source, the German Research Centre for Geosciences and the Western University recently agreed to establish two new large volume press beamlines at the Canadian Lightsource. As the first step a 250 tons DIA-LVP will be installed at the IDEAS beamline in 2014. The further development is associated with the construction of a superconducting wiggler beamline at the Brockhouse sector. A 1750 tons DIA LVP will be installed there about 2 years later. Up to the completion of this wiggler beamline the big press will be used for offline high pressure high temperature experiments under simulated Earth's mantle conditions. In addition to X-ray diffraction, all up-to-date high pressure techniques as ultrasonic interferometry, deformation analyses by X-radiography, X-ray densitometry, falling sphere viscosimetry, multi-staging etc. will be available at both beamlines. After the required commissioning the beamlines will be open to the worldwide user community from Geosciences, general material sciences, physics, chemistry, biology etc. based on the evaluation and ranking of the submitted user proposals by an international review panel.

  8. OPS MCC level B/C formulation requirements: Area targets and space volumes processor

    NASA Technical Reports Server (NTRS)

    Bishop, M. J., Jr.

    1979-01-01

    The level B/C mathematical specifications for the area targets and space volumes processor (ATSVP) are described. The processor is designed to compute the acquisition-of-signal (AOS) and loss-of-signal (LOS) times for area targets and space volumes. The characteristics of the area targets and space volumes are given. The mathematical equations necessary to determine whether the spacecraft lies within the area target or space volume are given. These equations provide a detailed model of the target geometry. A semianalytical technique for predicting the AOS and LOS time periods is disucssed. This technique was designed to bound the actual visibility period using a simplified target geometry model and unperturbed orbital motion. Functional overview of the ATSVP is presented and it's detailed logic flow is described.

  9. Technology transfer from NASA to targeted industries, volume 2

    NASA Technical Reports Server (NTRS)

    Mccain, Wayne; Schroer, Bernard J.; Souder, William E.; Spann, Mary S.; Watters, Harry; Ziemke, M. Carl

    1993-01-01

    This volume contains the following materials to support Volume 1: (1) Survey of Metal Fabrication Industry in Alabama; (2) Survey of Electronics Manufacturing/Assembly Industry in Alabama; (3) Apparel Modular Manufacturing Simulators; (4) Synopsis of a Stereolithography Project; (5) Transferring Modular Manufacturing Technology to an Apparel Firm; (6) Letters of Support; (7) Fact Sheets; (8) Publications; and (9) One Stop Access to NASA Technology Brochure.

  10. High volume fabrication of laser targets using MEMS techniques

    NASA Astrophysics Data System (ADS)

    Spindloe, C.; Arthur, G.; Hall, F.; Tomlinson, S.; Potter, R.; Kar, S.; Green, J.; Higginbotham, A.; Booth, N.; Tolley, M. K.

    2016-04-01

    The latest techniques for the fabrication of high power laser targets, using processes developed for the manufacture of Micro-Electro-Mechanical System (MEMS) devices are discussed. These laser targets are designed to meet the needs of the increased shot numbers that are available in the latest design of laser facilities. Traditionally laser targets have been fabricated using conventional machining or coarse etching processes and have been produced in quantities of 10s to low 100s. Such targets can be used for high complexity experiments such as Inertial Fusion Energy (IFE) studies and can have many complex components that need assembling and characterisation with high precision. Using the techniques that are common to MEMS devices and integrating these with an existing target fabrication capability we are able to manufacture and deliver targets to these systems. It also enables us to manufacture novel targets that have not been possible using other techniques. In addition, developments in the positioning systems that are required to deliver these targets to the laser focus are also required and a system to deliver the target to a focus of an F2 beam at 0.1Hz is discussed.

  11. Delineation of Supraclavicular Target Volumes in Breast Cancer Radiation Therapy

    SciTech Connect

    Brown, Lindsay C.; Diehn, Felix E.; Boughey, Judy C.; Childs, Stephanie K.; Park, Sean S.; Yan, Elizabeth S.; Petersen, Ivy A.; Mutter, Robert W.

    2015-07-01

    Purpose: To map the location of gross supraclavicular metastases in patients with breast cancer, in order to determine areas at highest risk of harboring subclinical disease. Methods and Materials: Patients with axial imaging of gross supraclavicular disease were identified from an institutional breast cancer registry. Locations of the metastatic lymph nodes were transferred onto representative axial computed tomography images of the supraclavicular region and compared with the Radiation Therapy Oncology Group (RTOG) breast cancer atlas for radiation therapy planning. Results: Sixty-two patients with 161 supraclavicular nodal metastases were eligible for study inclusion. At the time of diagnosis, 117 nodal metastases were present in 44 patients. Forty-four nodal metastases in 18 patients were detected at disease recurrence, 4 of whom had received prior radiation to the supraclavicular fossa. Of the 161 nodal metastases, 95 (59%) were within the RTOG consensus volume, 4 nodal metastases (2%) in 3 patients were marginally within the volume, and 62 nodal metastases (39%) in 30 patients were outside the volume. Supraclavicular disease outside the RTOG consensus volume was located in 3 regions: at the level of the cricoid and thyroid cartilage (superior to the RTOG volume), in the posterolateral supraclavicular fossa (posterolateral to the RTOG volume), and in the lateral low supraclavicular fossa (lateral to the RTOG volume). Only women with multiple supraclavicular metastases had nodal disease that extended superiorly to the level of the thyroid cartilage. Conclusions: For women with risk of harboring subclinical supraclavicular disease warranting the addition of supraclavicular radiation, coverage of the posterior triangle and the lateral low supraclavicular region should be considered. For women with known supraclavicular disease, extension of neck coverage superior to the cricoid cartilage may be warranted.

  12. Re-accretion Efficiencies in Small Impactor - Large Target Collisions

    NASA Astrophysics Data System (ADS)

    Jankowski, Tim; Wurm, G.; Jens, T.

    2013-10-01

    During the formation process of planets, small dust particles grow to km-sized planetesimals via collisions. While the collision partners are equally sized in early phases, fragmentation, catastrophic destruction and other recycling processes can lead to collisions between partners with various size ranges. The gas in protoplanetary disks exerts size- and mass-dependent drag forces on the dust particles and bodies present which is why the relative velocities between the small particles and larger bodies increase. A field of investigation are the small-impactor large-target collisions where (partial) erosion can occur and small ejected dust particles can be produced. These ejecta can couple to the gas quite rapidly and can then be recaptured by the target and stick to it in secondary collisions. We use a Monte-Carlo code to calculate re-accretion efficiencies under certain conditions i.e. in free molecular flow regime (stream lines end on target body; impactors are completely coupled to the gas). Using experimental data we developed a model for the amount, masses, directions, and velocities of the ejecta depending on the impactor mass and velocity and the position of impact. The amount of re-accreted ejecta as well as the total re-accreted mass can be determined by using the solution of the equation of motion for particles in gaseous environments. Both - the amount dependent efficiency as well as the mass dependent efficiency - are highly dependent on the seven free parameters (impact velocity, impactor size and density, target size and density, gas pressure and temperature) but generally benefit from high gas velocities and a large size difference between target and impactor. Our final intention is to provide an analytical expression for the re-accretion efficiencies in respect to the free parameters and to use this in different disk models for sweeping the free parameters dependent on the distance to the central star. One major advantage of our code is the

  13. A method of calculating a lung clinical target volume DVH for IMRT with intrafractional motion.

    PubMed

    Kung, J H; Zygmanski, P; Choi, N; Chen, G T Y

    2003-06-01

    The motion of lung tumors from respiration has been reported in the literature to be as large as 1-2 cm. This motion requires an additional margin between the Clinical Target Volume (CTV) and the Planning Target Volume (PTV). In Intensity Modulated Radiotherapy (IMRT), while such a margin is necessary, the margin may not be sufficient to avoid unintended high and low dose regions to the interior on moving CTV. Gated treatment has been proposed to improve normal tissues sparing as well as to ensure accurate dose coverage of the tumor volume. The following questions have not been addressed in the literature: (a) what is the dose error to a target volume without a gated IMRT treatment? (b) What is an acceptable gating window for such a treatment. In this study, we address these questions by proposing a novel technique for calculating the three-dimensional (3-D) dose error that would result if a lung IMRT plan were delivered without a gated linac beam. The method is also generalized for gated treatment with an arbitrary triggering window. IMRT plans for three patients with lung tumors were studied. The treatment plans were generated with HELIOS for delivery with 6 MV on a CL2100 Varian linear accelerator with a 26 pair MLC. A CTV to PTV margin of 1 cm was used. An IMRT planning system searches for an optimized fluence map phi(x,y) for each port, which is then converted into a dynamic MLC file (DMLC). The DMLC file contains information about MLC subfield shapes and the fractional Monitor Units (MUs) to be delivered for each subfield. With a lung tumor, a CTV that executes a quasiperiodic motion z(t) does not receive phi(x,y), but rather an Effective Incident Fluence EIF(x,y). We numerically evaluate the EIF(x,y) from a given DMLC file by a coordinate transformation to the Target's Eye View (TEV). In the TEV coordinate system, the CTV itself is stationary, and the MLC is seen to execute a motion -z(t) that is superimposed on the DMLC motion. The resulting EIF(x,y) is

  14. Data fusion for planning target volume and isodose prediction in prostate brachytherapy

    NASA Astrophysics Data System (ADS)

    Nouranian, Saman; Ramezani, Mahdi; Mahdavi, S. Sara; Spadinger, Ingrid; Morris, William J.; Salcudean, Septimiu E.; Abolmaesumi, Purang

    2015-03-01

    In low-dose prostate brachytherapy treatment, a large number of radioactive seeds is implanted in and adjacent to the prostate gland. Planning of this treatment involves the determination of a Planning Target Volume (PTV), followed by defining the optimal number of seeds, needles and their coordinates for implantation. The two major planning tasks, i.e. PTV determination and seed definition, are associated with inter- and intra-expert variability. Moreover, since these two steps are performed in sequence, the variability is accumulated in the overall treatment plan. In this paper, we introduce a model based on a data fusion technique that enables joint determination of PTV and the minimum Prescribed Isodose (mPD) map. The model captures the correlation between different information modalities consisting of transrectal ultrasound (TRUS) volumes, PTV and isodose contours. We take advantage of joint Independent Component Analysis (jICA) as a linear decomposition technique to obtain a set of joint components that optimally describe such correlation. We perform a component stability analysis to generate a model with stable parameters that predicts the PTV and isodose contours solely based on a new patient TRUS volume. We propose a framework for both modeling and prediction processes and evaluate it on a dataset of 60 brachytherapy treatment records. We show PTV prediction error of 10:02+/-4:5% and the V100 isodose overlap of 97+/-3:55% with respect to the clinical gold standard.

  15. Resonant RF network antennas for large-area and large-volume inductively coupled plasma sources

    NASA Astrophysics Data System (ADS)

    Hollenstein, Ch; Guittienne, Ph; Howling, A. A.

    2013-10-01

    Large-area and large-volume radio frequency (RF) plasmas are produced by different arrangements of an elementary electrical mesh consisting of two conductors interconnected by a capacitor at each end. The obtained cylindrical and planar RF networks are resonant and generate very high RF currents. The input impedance of such RF networks shows the behaviour of an RLC parallel resonance equivalent circuit. The real impedance at the resonance frequency is of great advantage for power matching compared with conventional inductive devices. Changes in the RLC equivalent circuit during the observed E-H transition will allow future interpretation of the plasma-antenna coupling. Furthermore, high power transfer efficiencies are found during inductively coupled plasma (ICP) operation. For the planar RF antenna network it is shown that the E-H transition occurs simultaneously over the entire antenna. The underlying physics of these discharges induced by the resonant RF network antenna is found to be identical to that of the conventional ICP devices described in the literature. The resonant RF network antenna is a new versatile plasma source, which can be adapted to applications in industry and research.

  16. The 1980 Large space systems technology. Volume 2: Base technology

    NASA Technical Reports Server (NTRS)

    Kopriver, F., III (Compiler)

    1981-01-01

    Technology pertinent to large antenna systems, technology related to large space platform systems, and base technology applicable to both antenna and platform systems are discussed. Design studies, structural testing results, and theoretical applications are presented with accompanying validation data. A total systems approach including controls, platforms, and antennas is presented as a cohesive, programmatic plan for large space systems.

  17. Atlas-Based Semiautomatic Target Volume Definition (CTV) for Head-and-Neck Tumors

    SciTech Connect

    Strassmann, Gerd; Abdellaoui, Soulimane; Richter, Detlef; Bekkaoui, Fayzal; Haderlein, Marlene; Fokas, Emmanouil; Timmesfeld, Nina; Vogel, Birgitt M.D.; Henzel, Martin; Engenhart-Cabillic, Rita

    2010-11-15

    Purpose: To develop a new semiautomatic method to improve target delineation in head-and-neck cancer. Methods and Materials: We implemented an atlas-based software program using fourteen anatomic landmarks as well as the most superior and inferior computerd tomography slices for automatic target delineation, using an advanced laryngeal carcinoma as an example. Registration was made by an affine transformation. Evaluation was performed with manually drawn contours for comparison. Three physicians sampled and further applied a target volume atlas to ten other computer tomography data sets. In addition, a rapid three-dimensional (3D) correction program was developed. Results: The mean time to the first semiautomatic target delineation proposal was 2.7 minutes. Manual contouring required 20.2 minutes per target, whereas semiautomatic target volume definition with the rapid 3D correction was completed in only 9.7 minutes. The net calculation time for image registration of the target volume atlas was negligible (approximately 0.6 seconds). Our method depicted a sufficient adaptation of the target volume atlas on the new data sets, with a mean similarity index of 77.2%. The similarity index increased up to 85% after 3D correction performed by the physicians. Conclusions: We have developed a new, feasible method for semiautomatic contouring that saves a significant amount (51.8%) of target delineation time for head-and-neck cancer patients. This approach uses a target volume atlas and a landmark model. The software was evaluated by means of laryngeal cancer but has important implications for various tumor types whereby target volumes remain constant in form and do not move with respiration.

  18. Target volume definition for three-dimensional conformal radiation therapy of lung cancer.

    PubMed

    Armstrong, J G

    1998-06-01

    Three-dimensional conformal radiation therapy (3DCRT) is a mode of high precision radiotherapy which has the potential to improve the therapeutic ratio of radiation therapy for locally advanced non-small cell lung cancer. The preliminary clinical experience with 3DCRT has been promising and justifies further endeavour to refine its clinical application and ultimately test its role in randomized trials. There are several steps to be taken before 3DCRT evolves into an effective single modality for the treatment of lung cancer and before it is effectively integrated with chemotherapy. This article addresses core issues in the process of target volume definition for the application of 3DCRT technology to lung cancer. The International Commission on Radiation Units and Measurements Report no. 50 definitions of target volumes are used to identify the factors influencing target volumes in lung cancer. The rationale for applying 3DCRT to lung cancer is based on the frequency of failure to eradicate gross tumour with conventional approaches. It may therefore be appropriate to ignore subclinical or microscopic extensions when designing a clinical target volume, thereby restricting target volume size and allowing dose escalation. When the clinical target volume is expanded to a planning target volume, an optimized margin would result in homogeneous irradiation to the highest dose feasible within normal tissue constraints. To arrive at such optimized margins, multiple factors, including data acquisition, data transfer, patient movement, treatment reproducibility, and internal organ and target volume motion, must be considered. These factors may vary significantly depending on technology and techniques, and published quantitative analyses are no substitute for meticulous attention to detail and audit of performance. PMID:9849380

  19. Technology transfer from NASA to targeted industries, volume 1

    NASA Technical Reports Server (NTRS)

    Mccain, Wayne; Schroer, Bernard J.; Souder, William E.; Spann, Mary S.; Watters, Harry; Ziemke, M. Carl

    1993-01-01

    This report summarizes the University of Alabama in Huntsville (UAH) technology transfer to three target industries with focus on the apparel manufacturing industry in Alabama. Also included in this report are an analysis of the 1992 problem statements submitted by Alabama firms, the results of the survey of 1987-88 NASA Tech Brief requests, the results of the followup to Alabama submitted problem statements, and the development of the model describing the MSFC technology transfer process.

  20. International Spine Radiosurgery Consortium Consensus Guidelines for Target Volume Definition in Spinal Stereotactic Radiosurgery

    SciTech Connect

    Cox, Brett W.; Spratt, Daniel E.; Lovelock, Michael; Bilsky, Mark H.; Lis, Eric; Ryu, Samuel; Sheehan, Jason; Gerszten, Peter C.; Chang, Eric; Gibbs, Iris; Soltys, Scott; Sahgal, Arjun; Deasy, Joe; Flickinger, John; Quader, Mubina; Mindea, Stefan; and others

    2012-08-01

    Purpose: Spinal stereotactic radiosurgery (SRS) is increasingly used to manage spinal metastases. However, target volume definition varies considerably and no consensus target volume guidelines exist. This study proposes consensus target volume definitions using common scenarios in metastatic spine radiosurgery. Methods and Materials: Seven radiation oncologists and 3 neurological surgeons with spinal radiosurgery expertise independently contoured target and critical normal structures for 10 cases representing common scenarios in metastatic spine radiosurgery. Each set of volumes was imported into the Computational Environment for Radiotherapy Research. Quantitative analysis was performed using an expectation maximization algorithm for Simultaneous Truth and Performance Level Estimation (STAPLE) with kappa statistics calculating agreement between physicians. Optimized confidence level consensus contours were identified using histogram agreement analysis and characterized to create target volume definition guidelines. Results: Mean STAPLE agreement sensitivity and specificity was 0.76 (range, 0.67-0.84) and 0.97 (range, 0.94-0.99), respectively, for gross tumor volume (GTV) and 0.79 (range, 0.66-0.91) and 0.96 (range, 0.92-0.98), respectively, for clinical target volume (CTV). Mean kappa agreement was 0.65 (range, 0.54-0.79) for GTV and 0.64 (range, 0.54-0.82) for CTV (P<.01 for GTV and CTV in all cases). STAPLE histogram agreement analysis identified optimal consensus contours (80% confidence limit). Consensus recommendations include that the CTV should include abnormal marrow signal suspicious for microscopic invasion and an adjacent normal bony expansion to account for subclinical tumor spread in the marrow space. No epidural CTV expansion is recommended without epidural disease, and circumferential CTVs encircling the cord should be used only when the vertebral body, bilateral pedicles/lamina, and spinous process are all involved or there is extensive metastatic

  1. Large volume flow electroporation of mRNA: clinical scale process.

    PubMed

    Li, Linhong; Allen, Cornell; Shivakumar, Rama; Peshwa, Madhusudan V

    2013-01-01

    Genetic modification for enhancing cellular function has been continuously pursued for fighting diseases. Messenger RNA (mRNA) transfection is found to be a promising solution in modifying hematopoietic and immune cells for therapeutic purpose. We have developed a flow electroporation-based system for large volume electroporation of cells with various molecules, including mRNA. This allows robust and scalable mRNA transfection of primary cells of different origin. Here we describe transfection of chimeric antigen receptor (CAR) mRNA into NK cells to modulate the ability of NK cells to target tumor cells. High levels of CAR expression in NK cells can be maintained for 3-7 days post transfection. CD19-specific CAR mRNA transfected NK cells demonstrate targeted lysis of CD19-expressing tumor cells OP-1, primary B-CLL tumor cells, and autologous CD19+ B cells in in vitro assays with enhanced potency: >80% lysis at effector-target ratio of 1:1. This allows current good manufacturing practices (cGMP) and regulatory compliant manufacture of CAR mRNA transfected NK cells for clinical delivery. PMID:23296932

  2. Defining Radiotherapy Target Volumes Using {sup 18}F-Fluoro-Deoxy-Glucose Positron Emission Tomography/Computed Tomography: Still a Pandora's Box?

    SciTech Connect

    Devic, Slobodan; Tomic, Nada; Faria, Sergio; Menard, Sonia; Lisbona, Robert; Lehnert, Shirley

    2010-12-01

    Purpose: We discuss the effect of {sup 18}F-fluoro-deoxy-glucose (FDG) positron emission tomography (PET)/computed tomography (CT) data on target volume definition for radiotherapy planning. We compared the effect of various thresholding methods on the PET-based target volume vs. the standard CT-based tumor volume. Methods and Materials: Different thresholding methods were reviewed and compared to our PET-based gross tumor volume data obtained from a cohort of 31 non-small-cell lung carcinoma patients who had undergone preoperative PET/CT scans for staging. The feasibility and limitations of FDG-based PET/CT data on target volume delineation in radiotherapy planning have been demonstrated with frequently used approaches for target outlining such as the qualitative visual method and the fixed 15% or 40% of the maximal iso-uptake value threshold methods. Results: The relationship between PET-based and CT-based volumes generally suffers from poor correlation between the two image data sets, expressed in terms of a large statistical variation in gross tumor volume ratios, irrespective of the threshold method used. However, we found that the maximal signal/background ratios in non-small-cell lung carcinoma patients correlated well with the pathologic results, with an average ratio for adenocarcinoma, large cell carcinoma, and squamous cell carcinoma of 10.5 {+-} 3.5, 12.6 {+-} 2.8, and 14.1 {+-} 5.9, respectively. Conclusion: The fluctuations in tumor volume using different quantitative PET thresholding approaches did not depend on the thresholding method used. They originated from the nature of functional imaging in general and PET imaging in particular. Functional imaging will eventually be used for biologically tailored target radiotherapy volume definition not as a replacement of CT- or magnetic resonance imaging-based anatomic gross tumor volumes but with the methods complementing each other in a complex mosaic of distinct biologic target volumes.

  3. Assessing the Effect of a Contouring Protocol on Postprostatectomy Radiotherapy Clinical Target Volumes and Interphysician Variation

    SciTech Connect

    Mitchell, Darren M.; Perry, Lesley; Smith, Steve; Elliott, Tony; Wylie, James P.; Cowan, Richard A.; Livsey, Jacqueline E.; Logue, John P.

    2009-11-15

    Purpose: To compare postprostatectomy clinical target volume (CTV) delineation before and after the introduction of a contouring protocol and to investigate its effect on interphysician variability Methods and Materials: Six site-specialized radiation oncologists independently delineated a CTV on the computed tomography (CT) scans of 3 patients who had received postprostatectomy radiotherapy. At least 3 weeks later this was repeated, but with the physicians adhering to the contouring protocol from the Medical Research Council's Radiotherapy and Androgen Deprivation In Combination After Local Surgery (RADICALS) trial. The volumes obtained before and after the protocol were compared and the effect of the protocol on interphysician variability assessed. Results: An increase in mean CTV for all patients of 40.7 to 53.9cm{sup 3} was noted as a result of observing the protocol, with individual increases in the mean CTV of 65%, 15%, and 24% for Patients 1, 2, and 3 respectively. A reduction in interphysician variability was noted when the protocol was used. Conclusions: Substantial interphysician variation in target volume delineation for postprostatectomy radiotherapy exists, which can be reduced by the use of a contouring protocol. The RADICALS contouring protocol increases the target volumes when compared with those volumes typically applied at our center. The effect of treating larger volumes on the therapeutic ratio and resultant toxicity should be carefully monitored, particularly if the same dose-response as documented in radical prostate radiotherapy applies to the adjuvant and salvage setting. Prostate cancer, Postprostatectomy, Radiotherapy, Target volume.

  4. Formation of large target residues in intermediate energy nuclear collisions

    SciTech Connect

    Loveland, W.; Aleklett, K.; Sihver, L.; Xu, Z.; Seaborg, G.T.

    1987-04-01

    We have used radiochemical techniques to measure the yields, angular distributions and velocity spectra of the large (A/sub frag/ greater than or equal to 2/3 A/sub tgt/) target residues from the fragmentation of /sup 197/Au by intermediate energy /sup 12/C, /sup 20/Ne, /sup 32/S, /sup 40/Ar, /sup 84/Kr, and /sup 139/La projectiles. The fragment moving frame angular distributions are asymmetric for the lighter projectiles (C-Ar). The fragment velocity spectra are Maxwellian for the Kr induced reactions and non-Maxwellian for the reactions induced by the lighter ions. We interpret these results in terms of a change in the dominant fragment production mechanism(s) from one(s) involving a fast non-equilibrium process for the lighter ions to a slow, equilibrium process for Kr. Comparison of the measured yields and angular distributions with calculations made using a Boltzmann transport equation with appropriate modifications for Pauli blocking, etc., show excellent agreement between data and theory. 12 refs., 12 figs.

  5. Large space telescope, phase A. Volume 3: Optical telescope assembly

    NASA Technical Reports Server (NTRS)

    1972-01-01

    The development and characteristics of the optical telescope assembly for the Large Space Telescope are discussed. The systems considerations are based on mission-related parameters and optical equipment requirements. Information is included on: (1) structural design and analysis, (2) thermal design, (3) stabilization and control, (4) alignment, focus, and figure control, (5) electronic subsystem, and (6) scientific instrument design.

  6. Large space telescope, phase A. Volume 4: Scientific instrument package

    NASA Technical Reports Server (NTRS)

    1972-01-01

    The design and characteristics of the scientific instrument package for the Large Space Telescope are discussed. The subjects include: (1) general scientific objectives, (2) package system analysis, (3) scientific instrumentation, (4) imaging photoelectric sensors, (5) environmental considerations, and (6) reliability and maintainability.

  7. RADON DIAGNOSTIC MEASUREMENT GUIDANCE FOR LARGE BUILDINGS - VOLUME 2. APPENDICES

    EPA Science Inventory

    The report discusses the development of radon diagnostic procedures and mitigation strategies applicable to a variety of large non-residential buildings commonly found in Florida. The investigations document and evaluate the nature of radon occurrence and entry mechanisms for rad...

  8. Large space telescope, phase A. Volume 5: Support systems module

    NASA Technical Reports Server (NTRS)

    1972-01-01

    The development and characteristics of the support systems module for the Large Space Telescope are discussed. The following systems and described: (1) thermal control, (2) electrical, (3) communication and data landing, (4) attitude control system, and (5) structural features. Analyses of maintainability and reliability considerations are included.

  9. Evaluation of Peritumoral Edema in the Delineation of Radiotherapy Clinical Target Volumes for Glioblastoma

    SciTech Connect

    Chang, Eric L. . E-mail: echang@mdanderson.org; Akyurek, Serap; Avalos, Tedde C; Rebueno, Neal C; Spicer, Chris C; Garcia, John C; Famiglietti, Robin; Allen, Pamela K.; Chao, K.S. Clifford; Mahajan, Anita; Woo, Shiao Y.; Maor, Moshe H.

    2007-05-01

    Purpose: To evaluate the spatial relationship between peritumoral edema and recurrence pattern in patients with glioblastoma (GBM). Methods and Materials: Forty-eight primary GBM patients received three-dimensional conformal radiotherapy that did not intentionally include peritumoral edema within the clinical target volume between July 2000 and June 2001. All 48 patients have subsequently recurred, and their original treatment planning parameters were used for this study. New theoretical radiation treatment plans were created for the same 48 patients, based on Radiation Therapy Oncology Group (RTOG) target delineation guidelines that specify inclusion of peritumoral edema. Target volume and recurrent tumor coverage, as well as percent volume of normal brain irradiated, were assessed for both methods of target delineation using dose-volume histograms. Results: A comparison between the location of recurrent tumor and peritumoral edema volumes from all 48 cases failed to show correlation by linear regression modeling (r {sup 2} 0.0007; p = 0.3). For patients with edema >75 cm{sup 3}, the percent volume of brain irradiated to 46 Gy was significantly greater in treatment plans that intentionally included peritumoral edema compared with those that did not (38% vs. 31%; p = 0.003). The pattern of failure was identical between the two sets of plans (40 central, 3 in-field, 3 marginal, and 2 distant recurrence). Conclusion: Clinical target volume delineation based on a 2-cm margin rather than on peritumoral edema did not seem to alter the central pattern of failure for patients with GBM. For patients with peritumoral edema >75 cm{sup 3}, using a constant 2-cm margin resulted in a smaller median percent volume of brain being irradiated to 30 Gy, 46 Gy, and 50 Gy compared with corresponding theoretical RTOG plans that deliberately included peritumoral edema.

  10. Large-Volume Resonant Microwave Discharge for Plasma Cleaning of a CEBAF 5-Cell SRF Cavity

    SciTech Connect

    J. Mammosser, S. Ahmed, K. Macha, J. Upadhyay, M. Nikoli, S. Popovi, L. Vuakovi

    2012-07-01

    We report the preliminary results on plasma generation in a 5-cell CEBAF superconducting radio-frequency (SRF) cavity for the application of cavity interior surface cleaning. CEBAF currently has {approx}300 of these five cell cavities installed in the Jefferson Lab accelerator which are mostly limited by cavity surface contamination. The development of an in-situ cavity surface cleaning method utilizing a resonant microwave discharge could lead to significant CEBAF accelerator performance improvement. This microwave discharge is currently being used for the development of a set of plasma cleaning procedures targeted to the removal of various organic, metal and metal oxide impurities. These contaminants are responsible for the increase of surface resistance and the reduction of RF performance in installed cavities. The CEBAF five cell cavity volume is {approx} 0.5 m2, which places the discharge in the category of large-volume plasmas. CEBAF cavity has a cylindrical symmetry, but its elliptical shape and transversal power coupling makes it an unusual plasma application, which requires special consideration of microwave breakdown. Our preliminary study includes microwave breakdown and optical spectroscopy, which was used to define the operating pressure range and the rate of removal of organic impurities.

  11. Real-time visualization of large volume datasets on standard PC hardware.

    PubMed

    Xie, Kai; Yang, Jie; Zhu, Y M

    2008-05-01

    In medical area, interactive three-dimensional volume visualization of large volume datasets is a challenging task. One of the major challenges in graphics processing unit (GPU)-based volume rendering algorithms is the limited size of texture memory imposed by current GPU architecture. We attempt to overcome this limitation by rendering only visible parts of large CT datasets. In this paper, we present an efficient, high-quality volume rendering algorithm using GPUs for rendering large CT datasets at interactive frame rates on standard PC hardware. We subdivide the volume dataset into uniform sized blocks and take advantage of combinations of early ray termination, empty-space skipping and visibility culling to accelerate the whole rendering process and render visible parts of volume data. We have implemented our volume rendering algorithm for a large volume data of 512 x 304 x 1878 dimensions (visible female), and achieved real-time performance (i.e., 3-4 frames per second) on a Pentium 4 2.4GHz PC equipped with NVIDIA Geforce 6600 graphics card ( 256 MB video memory). This method can be used as a 3D visualization tool of large CT datasets for doctors or radiologists. PMID:18243401

  12. Special Properties of Coherence Scanning Interferometers for large Measurement Volumes

    NASA Astrophysics Data System (ADS)

    Bauer, W.

    2011-08-01

    In contrast to many other optical methods the uncertainty of Coherence Scanning Interferometer (CSI) in vertical direction is independent from the field of view. Therefore CSIs are ideal instruments for measuring 3D-profiles of larger areas (36×28mm2, e.g.) with high precision. This is of advantage for the determination of form parameters like flatness, parallelism and steps heights within a short time. In addition, using a telecentric beam path allows measurements of deep lying surfaces (<70mm) and the determination of form parameters with large step-heights. The lateral and spatial resolution, however, are reduced. In this presentation different metrological characteristics together with their potential errors are analyzed for large-scale measuring CSIs. Therefore these instruments are ideal tools in quality control for good/bad selections, e.g. The consequences for the practical use in industry and for standardization are discussed by examples of workpieces of automotive suppliers or from the steel industry.

  13. Large-volume protein crystal growth for neutron macromolecular crystallography

    SciTech Connect

    Ng, Joseph D.; Baird, James K.; Coates, Leighton; Garcia-Ruiz, Juan M.; Hodge, Teresa A.; Huang, Sijay

    2015-03-30

    Neutron macromolecular crystallography (NMC) is the prevailing method for the accurate determination of the positions of H atoms in macromolecules. As neutron sources are becoming more available to general users, finding means to optimize the growth of protein crystals to sizes suitable for NMC is extremely important. Historically, much has been learned about growing crystals for X-ray diffraction. However, owing to new-generation synchrotron X-ray facilities and sensitive detectors, protein crystal sizes as small as in the nano-range have become adequate for structure determination, lessening the necessity to grow large crystals. Here, some of the approaches, techniques and considerations for the growth of crystals to significant dimensions that are now relevant to NMC are revisited. We report that these include experimental strategies utilizing solubility diagrams, ripening effects, classical crystallization techniques, microgravity and theoretical considerations.

  14. Large-volume protein crystal growth for neutron macromolecular crystallography.

    PubMed

    Ng, Joseph D; Baird, James K; Coates, Leighton; Garcia-Ruiz, Juan M; Hodge, Teresa A; Huang, Sijay

    2015-04-01

    Neutron macromolecular crystallography (NMC) is the prevailing method for the accurate determination of the positions of H atoms in macromolecules. As neutron sources are becoming more available to general users, finding means to optimize the growth of protein crystals to sizes suitable for NMC is extremely important. Historically, much has been learned about growing crystals for X-ray diffraction. However, owing to new-generation synchrotron X-ray facilities and sensitive detectors, protein crystal sizes as small as in the nano-range have become adequate for structure determination, lessening the necessity to grow large crystals. Here, some of the approaches, techniques and considerations for the growth of crystals to significant dimensions that are now relevant to NMC are revisited. These include experimental strategies utilizing solubility diagrams, ripening effects, classical crystallization techniques, microgravity and theoretical considerations. PMID:25849493

  15. Large-volume protein crystal growth for neutron macromolecular crystallography

    DOE PAGESBeta

    Ng, Joseph D.; Baird, James K.; Coates, Leighton; Garcia-Ruiz, Juan M.; Hodge, Teresa A.; Huang, Sijay

    2015-03-30

    Neutron macromolecular crystallography (NMC) is the prevailing method for the accurate determination of the positions of H atoms in macromolecules. As neutron sources are becoming more available to general users, finding means to optimize the growth of protein crystals to sizes suitable for NMC is extremely important. Historically, much has been learned about growing crystals for X-ray diffraction. However, owing to new-generation synchrotron X-ray facilities and sensitive detectors, protein crystal sizes as small as in the nano-range have become adequate for structure determination, lessening the necessity to grow large crystals. Here, some of the approaches, techniques and considerations for themore » growth of crystals to significant dimensions that are now relevant to NMC are revisited. We report that these include experimental strategies utilizing solubility diagrams, ripening effects, classical crystallization techniques, microgravity and theoretical considerations.« less

  16. Clinicopathologic Analysis of Microscopic Extension in Lung Adenocarcinoma: Defining Clinical Target Volume for Radiotherapy

    SciTech Connect

    Grills, Inga S.; Fitch, Dwight L.; Goldstein, Neal S.; Yan Di; Chmielewski, Gary W.; Welsh, Robert J.; Kestin, Larry L.

    2007-10-01

    Purpose: To determine the gross tumor volume (GTV) to clinical target volume margin for non-small-cell lung cancer treatment planning. Methods: A total of 35 patients with Stage T1N0 adenocarcinoma underwent wedge resection plus immediate lobectomy. The gross tumor size and microscopic extension distance beyond the gross tumor were measured. The nuclear grade and percentage of bronchoalveolar features were analyzed for association with microscopic extension. The gross tumor dimensions were measured on a computed tomography (CT) scan (lung and mediastinal windows) and compared with the pathologic dimensions. The potential coverage of microscopic extension for two different lung stereotactic radiotherapy regimens was evaluated. Results: The mean microscopic extension distance beyond the gross tumor was 7.2 mm and varied according to grade (10.1, 7.0, and 3.5 mm for Grade 1 to 3, respectively, p < 0.01). The 90th percentile for microscopic extension was 12.0 mm (13.0, 9.7, and 4.4 mm for Grade 1 to 3, respectively). The CT lung windows correlated better with the pathologic size than did the mediastinal windows (gross pathologic size overestimated by a mean of 5.8 mm; composite size [gross plus microscopic extension] underestimated by a mean of 1.2 mm). For a GTV contoured on the CT lung windows, the margin required to cover microscopic extension for 90% of the cases would be 9 mm (9, 7, and 4 mm for Grade 1 to 3, respectively). The potential microscopic extension dosimetric coverage (55 Gy) varied substantially between the stereotactic radiotherapy schedules. Conclusion: For lung adenocarcinomas, the GTV should be contoured using CT lung windows. Although a GTV based on the CT lung windows would underestimate the gross tumor size plus microscopic extension by only 1.2 mm for the average case, the clinical target volume expansion required to cover the microscopic extension in 90% of cases could be as large as 9 mm, although considerably smaller for high-grade tumors

  17. Image Guidance-Based Target Volume Margin Expansion in IMRT of Head and Neck Cancer.

    PubMed

    Srivastava, Shiv P; Cheng, Chee-Wai; Das, Indra J

    2016-02-01

    This study quantifies the setup uncertainties to optimize the planning target volume (PTV) margin based on daily image guidance, its dosimetric impact, and radiobiological implication for intensity-modulated radiation therapy (IMRT) in head and neck cancer. Ten patients were retrospectively chosen who had been treated with IMRT and with daily image-guided radiation therapy (IGRT). The daily setup errors of the 10 patients from on-board imaging for the entire treatment were analyzed. Planning target volumes were generated by expanding the clinical target volumes (CTVs) with 0 to 10 mm margins. The IMRT plans with the same dose-volume constraints were created in an Eclipse treatment planning system. The effect of volume expansion was analyzed with biological indices such as tumor control probability, normal tissue complication probability (NTCP), and equivalent uniform dose. Analysis of 906 daily setup corrections using daily IGRT showed that 98% of the daily setups are within ± 5 mm. The relative increase in PTV-CTV volume from 0 to 10 mm margins provides nearly 4-fold volume increase and is linearly related to monitor unit (MU). The increase in MU is about 5%/mm margin increase. The relative increase in NTCP of parotids from 5 to 10 mm margins is 3.2 ± 1.15. Increase in PTV margin increases extra tissue volume with a corresponding increase in MU for treatment and NTCP values. Even a small margin increase (eg, 1 mm) may result in increase of more than 20% in relative extra volume and 15% in NTCP value of organs at risk (OARs). With image guidance, the setup uncertainty could be achieved within ± 5 mm for 98% of the treatments, and a margin <5 mm for PTV may seem desirable to reduce the extra tissue irradiated, but at the expense of a more demanding setup accuracy. PMID:25432930

  18. Characterization of Target Volume Changes During Breast Radiotherapy Using Implanted Fiducial Markers and Portal Imaging

    SciTech Connect

    Harris, Emma J. Donovan, Ellen M.; Yarnold, John R.; Coles, Charlotte E.; Evans, Philip M.

    2009-03-01

    Purpose: To determine target volume changes by using volume and shape analysis for patients receiving radiotherapy after breast conservation surgery and to compare different methods of automatically identifying changes in target volume, position, size, and shape during radiotherapy for use in adaptive radiotherapy. Methods and Materials: Eleven patients undergoing whole breast radiotherapy had fiducial markers sutured into the excision cavity at the time of surgery. Patients underwent imaging using computed tomography (for planning and at the end of treatment) and during treatment by using portal imaging. A marker volume (MV) was defined by using the measured marker positions. Changes in both individual marker positions and MVs were identified manually and using six automated similarity indices. Comparison of the two types of analysis (manual and automated) was undertaken to establish whether similarity indices can be used to automatically detect changes in target volumes. Results: Manual analysis showed that 3 patients had significant MV reduction. This analysis also showed significant changes between planning computed tomography and the start of treatment for 9 patients, including single and multiple marker movement, deformation (shape change), and rotation. Four of the six similarity indices were shown to be sensitive to the observed changes. Conclusions: Significant changes in size, shape, and position occur to the fiducial marker-defined volume. Four similarity indices can be used to identify these changes, and a protocol for their use in adaptive radiotherapy is suggested.

  19. OPS MCC level B/C formulation requirements: Area targets and space volumes processor

    NASA Technical Reports Server (NTRS)

    Bishop, M. J., Jr.

    1979-01-01

    The level B/C mathematical specifications for the area targets and space volume processor (ATSVP) as well as the characteristics of the system are provided. The mathematical equation necessary to determine whether the spacecraft lies within the area target or space volume is presented. A semianalytical technique for predicting the acquisition of signal (AOS) and loss of signal (LOS) time periods is discussed. A functional overview of the ATSVP which includes an outline of the process required to determine precise AOS and LOS times are given.

  20. Large Volume Self-Organization of Polymer/Nanoparticle Hybrids with Millimeter Scale Grain Sizes using Brush Block Copolymers

    NASA Astrophysics Data System (ADS)

    Song, Dongpo; Watkins, James

    The lack of sufficient long-range order in self-assembled nanostructures is a bottleneck for many nanotechnology applications. In this work, we report that exceptionally large volume of highly ordered arrays (single grains) on the order of millimeters in scale can be rapidly created through a unique innate guiding mechanism of brush block copolymers (BBCPs). The grain volume is over 1 billion times larger relative to that of typical self-assembled linear BCPs (LBCPs). The use of strong interactions between nanoparticles (NPs) and BBCPs enables the high loadings of functional materials, up to 76 wt% (46 vol%) in the target domain, while maintaining excellent long-range order. Overall this work provides a simple route to precisely control the spatial orientation of functionalities at nanometer length scales over macroscopic volumes, thereby enabling the production of hybrid materials for many important applications.

  1. Systems and methods for the detection of low-level harmful substances in a large volume of fluid

    DOEpatents

    Carpenter, Michael V.; Roybal, Lyle G.; Lindquist, Alan; Gallardo, Vincente

    2016-03-15

    A method and device for the detection of low-level harmful substances in a large volume of fluid comprising using a concentrator system to produce a retentate and analyzing the retentate for the presence of at least one harmful substance. The concentrator system performs a method comprising pumping at least 10 liters of fluid from a sample source through a filter. While pumping, the concentrator system diverts retentate from the filter into a container. The concentrator system also recirculates at least part of the retentate in the container again through the filter. The concentrator system controls the speed of the pump with a control system thereby maintaining a fluid pressure less than 25 psi during the pumping of the fluid; monitors the quantity of retentate within the container with a control system, and maintains a reduced volume level of retentate and a target volume of retentate.

  2. Radiation from Large Gas Volumes and Heat Exchange in Steam Boiler Furnaces

    SciTech Connect

    Makarov, A. N.

    2015-09-15

    Radiation from large cylindrical gas volumes is studied as a means of simulating the flare in steam boiler furnaces. Calculations of heat exchange in a furnace by the zonal method and by simulation of the flare with cylindrical gas volumes are described. The latter method is more accurate and yields more reliable information on heat transfer processes taking place in furnaces.

  3. Sand tank experiment of a large volume biodiesel spill

    NASA Astrophysics Data System (ADS)

    Scully, K.; Mayer, K. U.

    2015-12-01

    Although petroleum hydrocarbon releases in the subsurface have been well studied, the impacts of subsurface releases of highly degradable alternative fuels, including biodiesel, are not as well understood. One concern is the generation of CH4­ which may lead to explosive conditions in underground structures. In addition, the biodegradation of biodiesel consumes O2 that would otherwise be available for the degradation of petroleum hydrocarbons that may be present at a site. Until now, biodiesel biodegradation in the vadose zone has not been examined in detail, despite being critical to understanding the full impact of a release. This research involves a detailed study of a laboratory release of 80 L of biodiesel applied at surface into a large sandtank to examine the progress of biodegradation reactions. The experiment will monitor the onset and temporal evolution of CH4 generation to provide guidance for site monitoring needs following a biodiesel release to the subsurface. Three CO2 and CH4 flux chambers have been deployed for long term monitoring of gas emissions. CO2 fluxes have increased in all chambers over the 126 days since the start of the experiment. The highest CO2 effluxes are found directly above the spill and have increased from < 0.5 μmol m-2 s-1 to ~3.8 μmol m-2 s-1, indicating an increase in microbial activity. There were no measurable CH4 fluxes 126 days into the experiment. Sensors were emplaced to continuously measure O2, CO2, moisture content, matric potential, EC, and temperature. In response to the release, CO2 levels have increased across all sensors, from an average value of 0.1% to 0.6% 126 days after the start of the experiment, indicating the rapid onset of biodegradation. The highest CO2 values observed from samples taken in the gas ports were 2.5%. Average O2 concentrations have decreased from 21% to 17% 126 days after the start of the experiment. O2 levels in the bottom central region of the sandtank declined to approximately 12%.

  4. Testbed for large volume surveillance through distributed fusion and resource management

    NASA Astrophysics Data System (ADS)

    Valin, Pierre; Guitouni, Adel; Bossé, Éloi; Wehn, Hans; Yates, Richard; Zwick, Harold

    2007-04-01

    DRDC Valcartier has initiated, through a PRECARN partnership project, the development of an advanced simulation testbed for the evaluation of the effectiveness of Network Enabled Operations in a coastal large volume surveillance situation. The main focus of this testbed is to study concepts like distributed information fusion, dynamic resources and networks configuration management, and self synchronising units and agents. This article presents the requirements, design and first implementation builds, and reports on some preliminary results. The testbed allows to model distributed nodes performing information fusion, dynamic resource management planning and scheduling, as well as configuration management, given multiple constraints on the resources and their communications networks. Two situations are simulated: cooperative and non-cooperative target search. A cooperative surface target behaves in ways to be detected (and rescued), while an elusive target attempts to avoid detection. The current simulation consists of a networked set of surveillance assets including aircraft (UAVs, helicopters, maritime patrol aircraft), and ships. These assets have electrooptical and infrared sensors, scanning and imaging radar capabilities. Since full data sharing over datalinks is not feasible, own-platform data fusion must be simulated to evaluate implementation and performance of distributed information fusion. A special emphasis is put on higher-level fusion concepts using knowledge-based rules, with level 1 fusion already providing tracks. Surveillance platform behavior is also simulated in order to evaluate different dynamic resource management algorithms. Additionally, communication networks are modeled to simulate different information exchange concepts. The testbed allows the evaluation of a range of control strategies from independent platform search, through various levels of platform collaboration, up to a centralized control of search platforms.

  5. Intra and Interfraction Mediastinal Nodal Region Motion: Implications for Internal Target Volume Expansions

    SciTech Connect

    Thomas, Jonathan G.; Kashani, Rojano; Balter, James M.; Tatro, Daniel; Kong, F.-M.; Pan, Charlie C.

    2009-07-01

    The purpose of this study was to determine the intra and interfraction motion of mediastinal lymph node regions. Ten patients with nonsmall-cell lung cancer underwent controlled inhale and exhale computed tomography (CT) scans during two sessions (40 total datasets) and mediastinal nodal stations 1-8 were outlined. Corresponding CT scans from different sessions were registered to remove setup error and, in this reference frame, the centroid of each nodal station was compared for right-left (RL), anterior-posterior (AP), and superior-inferior (SI) displacement. In addition, an anisotropic volume expansion encompassing the change of the nodal region margins in all directions was used. Intrafraction displacement was determined by comparing same session inhale-exhale scans. Interfraction reproducibility of nodal regions was determined by comparing the same respiratory phase scans between two sessions. Intrafraction displacement of centroid varied between nodal stations. All nodal regions moved posteriorly and superiorly with exhalation, and inferior nodal stations showed the most motion. Based on anisotropic expansion, nodal regions expanded mostly in the RL direction from inhale to exhale. The interpatient variations in intrafraction displacement were large compared with the displacements themselves. Moreover, there was substantial interfractional displacement ({approx}5 mm). Mediastinal lymph node regions clearly move during breathing. In addition, deformation of nodal regions between inhale and exhale occurs. The degree of motion and deformation varies by station and by individual. This study indicates the potential advantage of characterizing individualized nodal region motion to safely maximize conformality of mediastinal nodal targets.

  6. Sparing Healthy Tissue and Increasing Tumor Dose Using Bayesian Modeling of Geometric Uncertainties for Planning Target Volume Personalization

    SciTech Connect

    Herschtal, Alan; Te Marvelde, Luc; Mengersen, Kerrie; Foroudi, Farshad; Eade, Thomas; Pham, Daniel; Caine, Hannah; Kron, Tomas

    2015-06-01

    Objective: To develop a mathematical tool that can update a patient's planning target volume (PTV) partway through a course of radiation therapy to more precisely target the tumor for the remainder of treatment and reduce dose to surrounding healthy tissue. Methods and Materials: Daily on-board imaging was used to collect large datasets of displacements for patients undergoing external beam radiation therapy for solid tumors. Bayesian statistical modeling of these geometric uncertainties was used to optimally trade off between displacement data collected from previously treated patients and the progressively accumulating data from a patient currently partway through treatment, to optimally predict future displacements for that patient. These predictions were used to update the PTV position and margin width for the remainder of treatment, such that the clinical target volume (CTV) was more precisely targeted. Results: Software simulation of dose to CTV and normal tissue for 2 real prostate displacement datasets consisting of 146 and 290 patients treated with a minimum of 30 fractions each showed that re-evaluating the PTV position and margin width after 8 treatment fractions reduced healthy tissue dose by 19% and 17%, respectively, while maintaining CTV dose. Conclusion: Incorporating patient-specific displacement patterns from early in a course of treatment allows PTV adaptation for the remainder of treatment. This substantially reduces the dose to healthy tissues and thus can reduce radiation therapy–induced toxicities, improving patient outcomes.

  7. Center-stabilized Yang-Mills Theory:Confinement and Large N Volume Independence

    SciTech Connect

    Unsal, Mithat; Yaffe, Laurence G.; /Washington U., Seattle

    2008-03-21

    We examine a double trace deformation of SU(N) Yang-Mills theory which, for large N and large volume, is equivalent to unmodified Yang-Mills theory up to O(1/N{sup 2}) corrections. In contrast to the unmodified theory, large N volume independence is valid in the deformed theory down to arbitrarily small volumes. The double trace deformation prevents the spontaneous breaking of center symmetry which would otherwise disrupt large N volume independence in small volumes. For small values of N, if the theory is formulated on R{sup 3} x S{sup 1} with a sufficiently small compactification size L, then an analytic treatment of the non-perturbative dynamics of the deformed theory is possible. In this regime, we show that the deformed Yang-Mills theory has a mass gap and exhibits linear confinement. Increasing the circumference L or number of colors N decreases the separation of scales on which the analytic treatment relies. However, there are no order parameters which distinguish the small and large radius regimes. Consequently, for small N the deformed theory provides a novel example of a locally four-dimensional pure gauge theory in which one has analytic control over confinement, while for large N it provides a simple fully reduced model for Yang-Mills theory. The construction is easily generalized to QCD and other QCD-like theories.

  8. Necessary conditions on Calabi-Yau manifolds for large volume vacua

    NASA Astrophysics Data System (ADS)

    Gray, James; He, Yang-Hui; Jejjala, Vishnu; Jurke, Benjamin; Nelson, Brent; Simón, Joan

    2012-11-01

    We describe an efficient, construction independent, algorithmic test to determine whether Calabi-Yau threefolds admit a structure compatible with the large volume moduli stabilization scenario of type IIB superstring theory. Using the algorithm, we scan complete intersection and toric hypersurface Calabi-Yau threefolds with 2≤h1,1≤4 and deduce that 418 among 4434 manifolds have a large volume limit with a single large four-cycle. We describe major extensions to this survey, which are currently underway.

  9. Plasma response to electron energy filter in large volume plasma device

    SciTech Connect

    Sanyasi, A. K.; Awasthi, L. M.; Mattoo, S. K.; Srivastava, P. K.; Singh, S. K.; Singh, R.; Kaw, P. K.

    2013-12-15

    An electron energy filter (EEF) is embedded in the Large Volume Plasma Device plasma for carrying out studies on excitation of plasma turbulence by a gradient in electron temperature (ETG) described in the paper of Mattoo et al. [S. K. Mattoo et al., Phys. Rev. Lett. 108, 255007 (2012)]. In this paper, we report results on the response of the plasma to the EEF. It is shown that inhomogeneity in the magnetic field of the EEF switches on several physical phenomena resulting in plasma regions with different characteristics, including a plasma region free from energetic electrons, suitable for the study of ETG turbulence. Specifically, we report that localized structures of plasma density, potential, electron temperature, and plasma turbulence are excited in the EEF plasma. It is shown that structures of electron temperature and potential are created due to energy dependence of the electron transport in the filter region. On the other hand, although structure of plasma density has origin in the particle transport but two distinct steps of the density structure emerge from dominance of collisionality in the source-EEF region and of the Bohm diffusion in the EEF-target region. It is argued and experimental evidence is provided for existence of drift like flute Rayleigh-Taylor in the EEF plasma.

  10. Plasma response to electron energy filter in large volume plasma device

    NASA Astrophysics Data System (ADS)

    Sanyasi, A. K.; Awasthi, L. M.; Mattoo, S. K.; Srivastava, P. K.; Singh, S. K.; Singh, R.; Kaw, P. K.

    2013-12-01

    An electron energy filter (EEF) is embedded in the Large Volume Plasma Device plasma for carrying out studies on excitation of plasma turbulence by a gradient in electron temperature (ETG) described in the paper of Mattoo et al. [S. K. Mattoo et al., Phys. Rev. Lett. 108, 255007 (2012)]. In this paper, we report results on the response of the plasma to the EEF. It is shown that inhomogeneity in the magnetic field of the EEF switches on several physical phenomena resulting in plasma regions with different characteristics, including a plasma region free from energetic electrons, suitable for the study of ETG turbulence. Specifically, we report that localized structures of plasma density, potential, electron temperature, and plasma turbulence are excited in the EEF plasma. It is shown that structures of electron temperature and potential are created due to energy dependence of the electron transport in the filter region. On the other hand, although structure of plasma density has origin in the particle transport but two distinct steps of the density structure emerge from dominance of collisionality in the source-EEF region and of the Bohm diffusion in the EEF-target region. It is argued and experimental evidence is provided for existence of drift like flute Rayleigh-Taylor in the EEF plasma.

  11. High-density three-dimensional localization microscopy across large volumes.

    PubMed

    Legant, Wesley R; Shao, Lin; Grimm, Jonathan B; Brown, Timothy A; Milkie, Daniel E; Avants, Brian B; Lavis, Luke D; Betzig, Eric

    2016-04-01

    Extending three-dimensional (3D) single-molecule localization microscopy away from the coverslip and into thicker specimens will greatly broaden its biological utility. However, because of the limitations of both conventional imaging modalities and conventional labeling techniques, it is a challenge to localize molecules in three dimensions with high precision in such samples while simultaneously achieving the labeling densities required for high resolution of densely crowded structures. Here we combined lattice light-sheet microscopy with newly developed, freely diffusing, cell-permeable chemical probes with targeted affinity for DNA, intracellular membranes or the plasma membrane. We used this combination to perform high-localization precision, ultrahigh-labeling density, multicolor localization microscopy in samples up to 20 μm thick, including dividing cells and the neuromast organ of a zebrafish embryo. We also demonstrate super-resolution correlative imaging with protein-specific photoactivable fluorophores, providing a mutually compatible, single-platform alternative to correlative light-electron microscopy over large volumes. PMID:26950745

  12. Packed domain Rayleigh-Sommerfeld wavefield propagation for large targets.

    PubMed

    Wuttig, Andreas; Kanka, Mario; Kreuzer, Hans Jürgen; Riesenberg, Rainer

    2010-12-20

    For applications in the domain of digital holographic microscopy, we present a fast algorithm to propagate scalar wave fields from a small source area to an extended, parallel target area of coarser sampling pitch, using the first Rayleigh-Sommerfeld diffraction formula. Our algorithm can take full advantage of the fast Fourier transform by decomposing the convolution kernel of the propagation into several convolution kernel patches. Using partial overlapping of the patches together with a soft blending function, the Fourier spectrum of these patches can be reduced to a low number of significant components, which can be stored in a compact sparse array structure. This allows for rapid evaluation of the partial convolution results by skipping over negligible components through the Fourier domain pointwise multiplication and direct mapping of the remaining multiplication results into a Fourier domain representation of the coarsly sampled target patch. The algorithm has been verified experimentally at a numerical aperture of 0.62, not showing any significant resolution limitations. PMID:21196980

  13. The effect of image-guided radiation therapy on the margin between the clinical target volume and planning target volume in lung cancer

    SciTech Connect

    Liang, Jun; Li, Minghui; Zhang, Tao; Han, Wei; Chen, Dongfu; Hui, Zhouguang; Lv, Jima; Zhang, Zhong; Zhang, Yin; Zhang, Liansheng; Zheng, Rong; Dai, Jianrong; Wang, Luhua

    2014-02-15

    Introduction: This study aimed to evaluate the effect of image-guided radiation therapy (IGRT) on the margin between the clinical target volume (CTV) and planning target volume (PTV) in lung cancer. Methods: The CTV and PTV margin were determined in three dimensions by four radiation oncologists using a standard method in 10 lung cancer patients, and compared to consensus values. Transfer error was measured using a rigid phantom containing gold markers. Systematic error and random error set up errors were calculated in three dimensions from pre-treatment and post-treatment cone beam CT scans. Finally, the margin between the CTV and PTV was corrected for set up error and calculated. Results: The margins between the CTV and PTV with IGRT (and without IGRT) were 0.88 cm (0.96 cm), 0.99 cm (1.08 cm) and 1.28 cm (1.82 cm) in the anterior and posterior (AP), left and right (LR) and superior and inferior (SI) directions, respectively. Images from two other patients verified the validity of the corrected margin. The target delineation errors of the radiation oncologists are considered to be the largest compared with the set up errors. The application of IGRT reduced the set up errors and the margins between CTV and PTV. Conclusions: The delineation errors of radiation oncologists are the most important factor to consider for the margin between CTV and PTV for lung cancer. IGRT can reduce the margins by reducing the set up errors, especially in the SI direction. Further research is required to assess whether the reduction in the margin is solely based on set up errors.

  14. The effect of image-guided radiation therapy on the margin between the clinical target volume and planning target volume in lung cancer

    PubMed Central

    Liang, Jun; Li, Minghui; Zhang, Tao; Han, Wei; Chen, Dongfu; Hui, Zhouguang; Lv, Jima; Zhang, Zhong; Zhang, Yin; Zhang, Liansheng; Zheng, Rong; Dai, Jianrong; Wang, Luhua

    2014-01-01

    IntroductionThis study aimed to evaluate the effect of image-guided radiation therapy (IGRT) on the margin between the clinical target volume (CTV) and planning target volume (PTV) in lung cancer. MethodsThe CTV and PTV margin were determined in three dimensions by four radiation oncologists using a standard method in 10 lung cancer patients, and compared to consensus values. Transfer error was measured using a rigid phantom containing gold markers. Systematic error () and random error () set up errors were calculated in three dimensions from pre-treatment and post-treatment cone beam CT scans. Finally, the margin between the CTV and PTV was corrected for set up error and calculated. ResultsThe margins between the CTV and PTV with IGRT (and without IGRT) were 0.88 cm (0.96 cm), 0.99 cm (1.08 cm) and 1.28 cm (1.82 cm) in the anterior and posterior (AP), left and right (LR) and superior and inferior (SI) directions, respectively. Images from two other patients verified the validity of the corrected margin. The target delineation errors of the radiation oncologists are considered to be the largest compared with the set up errors. The application of IGRT reduced the set up errors and the margins between CTV and PTV. ConclusionsThe delineation errors of radiation oncologists are the most important factor to consider for the margin between CTV and PTV for lung cancer. IGRT can reduce the margins by reducing the set up errors, especially in the SI direction. Further research is required to assess whether the reduction in the margin is solely based on set up errors. PMID:26229633

  15. Endoclips vs large or small-volume epinephrine in peptic ulcer recurrent bleeding

    PubMed Central

    Ljubicic, Neven; Budimir, Ivan; Biscanin, Alen; Nikolic, Marko; Supanc, Vladimir; Hrabar, Davor; Pavic, Tajana

    2012-01-01

    AIM: To compare the recurrent bleeding after endoscopic injection of different epinephrine volumes with hemoclips in patients with bleeding peptic ulcer. METHODS: Between January 2005 and December 2009, 150 patients with gastric or duodenal bleeding ulcer with major stigmata of hemorrhage and nonbleeding visible vessel in an ulcer bed (Forrest IIa) were included in the study. Patients were randomized to receive a small-volume epinephrine group (15 to 25 mL injection group; Group 1, n = 50), a large-volume epinephrine group (30 to 40 mL injection group; Group 2, n = 50) and a hemoclip group (Group 3, n = 50). The rate of recurrent bleeding, as the primary outcome, was compared between the groups of patients included in the study. Secondary outcomes compared between the groups were primary hemostasis rate, permanent hemostasis, need for emergency surgery, 30 d mortality, bleeding-related deaths, length of hospital stay and transfusion requirements. RESULTS: Initial hemostasis was obtained in all patients. The rate of early recurrent bleeding was 30% (15/50) in the small-volume epinephrine group (Group 1) and 16% (8/50) in the large-volume epinephrine group (Group 2) (P = 0.09). The rate of recurrent bleeding was 4% (2/50) in the hemoclip group (Group 3); the difference was statistically significant with regard to patients treated with either small-volume or large-volume epinephrine solution (P = 0.0005 and P = 0.045, respectively). Duration of hospital stay was significantly shorter among patients treated with hemoclips than among patients treated with epinephrine whereas there were no differences in transfusion requirement or even 30 d mortality between the groups. CONCLUSION: Endoclip is superior to both small and large volume injection of epinephrine in the prevention of recurrent bleeding in patients with peptic ulcer. PMID:22611315

  16. Commonalities and Contrasts in Location, Morphology and Emplacement of Large-volume Evolved Lava Flows

    NASA Astrophysics Data System (ADS)

    Domagall, A. S.; Gregg, T. K.

    2008-12-01

    Observations of active dacite domes and evolved (SiO2 wt.% >65) plinian-style eruptions are considered to reveal typical behaviors of Si-rich volcanic systems. However, despite lack of mention in modern volcanology textbooks, large-volume (>4 km3) evolved lava flows exist globally. These large- volume evolved lava flows have many characteristics in common regardless of location and precise tectonic setting: they are associated with other large-volume deposits (both lava flow units and ignimbrites); are commonly found with large silicic systems; regionally, they are associated with bimodal volcanism and eruption of these large-volume evolved flows does not generate a caldera. Large-volume evolved lava flows have low aspect ratios, tend to be uniform in thickness from the vent to the distal margins and abruptly decrease in thickness at the flow front where they may form enormous pahoehoe-like lobes. A lack of pyroclastic textures such as bubble wall shards, pumice fragments, broken phenocrysts and lithics is taken as evidence for their lava flow origin rather than an ignimbrite origin despite their high SiO2 contents. Presence of a pervasive basal breccia and lobate distal margins also suggest a lava flow emplacement origin, that only the most intensely rheomorphic ignimbrite could potentially mimic. Our own studies and those from the literature suggest high eruption temperatures and peralkaline chemistries may be responsible for producing unusually low viscosities to account for large lateral extents; emplacement via fissure vents and insulations of the flow may also be key in attaining great volumes.

  17. A two isocenter IMRT technique with a controlled junction dose for long volume targets

    NASA Astrophysics Data System (ADS)

    Zeng, G. G.; Heaton, R. K.; Catton, C. N.; Chung, P. W.; O'Sullivan, B.; Lau, M.; Parent, A.; Jaffray, D. A.

    2007-07-01

    Most IMRT techniques have been designed to treat targets smaller than the field size of conventional linac accelerators. In order to overcome the field size restrictions in applying IMRT, we developed a two isocenter IMRT technique to treat long volume targets. The technique exploits an extended dose gradient throughout a junction region of 4-6 cm to minimize the impact of field match errors on a junction dose and manipulates the inverse planning and IMRT segments to fill in the dose gradient and achieve dose uniformity. Techniques for abutting both conventional fields with IMRT ('Static + IMRT') and IMRT fields ('IMRT + IMRT') using two separate isocenters have been developed. Five long volume sarcoma cases have been planned in Pinnacle (Philips, Madison, USA) using Elekta Synergy and Varian 2100EX linacs; two of the cases were clinically treated with this technique. Advantages were demonstrated with well-controlled junction target uniformity and tolerance to setup uncertainties. The junction target dose heterogeneity was controlled at a level of ±5% for 3 mm setup errors at the field edges, the junction target dose changed less than 5% and the dose sparing to organs at risk (OARs) was maintained. Film measurements confirmed the treatment planning results.

  18. Guidelines for delineation of lymphatic clinical target volumes for high conformal radiotherapy: head and neck region

    PubMed Central

    2011-01-01

    The success of radiotherapy depends on the accurate delineation of the clinical target volume. The delineation of the lymph node regions has most impact, especially for tumors in the head and neck region. The purpose of this article was the development an atlas for the delineation of the clinical target volume for patients, who should receive radiotherapy for a tumor of the head and neck region. Literature was reviewed for localisations of the adjacent lymph node regions and their lymph drain in dependence of the tumor entity. On this basis the lymph node regions were contoured on transversal CT slices. The probability for involvement was reviewed and a recommendation for the delineation of the CTV was generated. PMID:21854585

  19. Production of large resonant plasma volumes in microwave electron cyclotron resonance ion sources

    DOEpatents

    Alton, G.D.

    1998-11-24

    Microwave injection methods are disclosed for enhancing the performance of existing electron cyclotron resonance (ECR) ion sources. The methods are based on the use of high-power diverse frequency microwaves, including variable-frequency, multiple-discrete-frequency, and broadband microwaves. The methods effect large resonant ``volume`` ECR regions in the ion sources. The creation of these large ECR plasma volumes permits coupling of more microwave power into the plasma, resulting in the heating of a much larger electron population to higher energies, the effect of which is to produce higher charge state distributions and much higher intensities within a particular charge state than possible in present ECR ion sources. 5 figs.

  20. Production of large resonant plasma volumes in microwave electron cyclotron resonance ion sources

    DOEpatents

    Alton, Gerald D.

    1998-01-01

    Microwave injection methods for enhancing the performance of existing electron cyclotron resonance (ECR) ion sources. The methods are based on the use of high-power diverse frequency microwaves, including variable-frequency, multiple-discrete-frequency, and broadband microwaves. The methods effect large resonant "volume" ECR regions in the ion sources. The creation of these large ECR plasma volumes permits coupling of more microwave power into the plasma, resulting in the heating of a much larger electron population to higher energies, the effect of which is to produce higher charge state distributions and much higher intensities within a particular charge state than possible in present ECR ion sources.

  1. Comparison of Various Radiation Therapy Techniques in Breast Cancer Where Target Volume Includes Mammaria Interna Region

    SciTech Connect

    Dogan, Mehmet Hakan; Zincircioglu, Seyit Burhanedtin Zorlu, Faruk

    2009-04-01

    In breast cancer radiotherapy, the internal mammary lymphatic chain is treated in the target volume in a group of patients with high-risk criteria. Because of the variability of the anatomic region and structures in the irradiation field, there are a number of different techniques in breast radiotherapy. While irradiating the target volume, we also consider minimizing the dose to critical structures such as heart, lung, and contralateral breast tissue. In this study, we evaluated the dose distribution of different radiotherapy techniques in patients with left-sided breast cancer who had breast-conserving surgery. A three-dimensional computerized planning system (3DCPS) was used for each patient to compare wide-field, oblique photon-electron, and perpendicular photon-electron techniques in terms of dose homogeneities in the target volume; the doses received by the contralateral breast, heart, and lung; and the coverage of the internal mammary chain. Data from 3DCPS were controlled by the Rando-phantom and thermoluminescence dosimetry. Critical structures were irradiated with acceptable dose percentages in addition to the internal mammary chain with both wide-field and photon-electron techniques. We detected more frequent hot spots in the oblique photon-electron technique than in the other techniques, and this situation necessitated changing the junctions. The wide-field technique was easy to perform and exposed less radiation dose to the heart than photon-electron techniques. In conclusion, we suggest the use of the wide-field technique in breast irradiation when the internal mammary area is in the target volume.

  2. Intensity-Modulated Radiotherapy for Craniospinal Irradiation: Target Volume Considerations, Dose Constraints, and Competing Risks

    SciTech Connect

    Parker, William Filion, Edith; Roberge, David; Freeman, Carolyn R.

    2007-09-01

    Purpose: To report the results of an analysis of dose received to tissues and organs outside the target volume, in the setting of spinal axis irradiation for the treatment of medulloblastoma, using three treatment techniques. Methods and Materials: Treatment plans (total dose, 23.4 Gy) for a standard two-dimensional (2D) technique, a three-dimensional (3D) technique using a 3D imaging-based target volume, and an intensity-modulated radiotherapy (IMRT) technique, were compared for 3 patients in terms of dose-volume statistics for target coverage, as well as organ at risk (OAR) and overall tissue sparing. Results: Planning target volume coverage and dose homogeneity was superior for the IMRT plans for V{sub 95%} (IMRT, 100%; 3D, 96%; 2D, 98%) and V{sub 107%} (IMRT, 3%; 3D, 38%; 2D, 37%). In terms of OAR sparing, the IMRT plan was better for all organs and whole-body contour when comparing V{sub 10Gy}, V{sub 15Gy}, and V{sub 20Gy}. The 3D plan was superior for V{sub 5Gy} and below. For the heart and liver in particular, the IMRT plans provided considerable sparing in terms of V{sub 10Gy} and above. In terms of the integral dose, the IMRT plans were superior for liver (IMRT, 21.9 J; 3D, 28.6 J; 2D, 38.6 J) and heart (IMRT, 9 J; 3D, 14.1J; 2D, 19.4 J), the 3D plan for the body contour (IMRT, 349 J; 3D, 337 J; 2D, 555 J). Conclusions: Intensity-modulated radiotherapy is a valid treatment option for spinal axis irradiation. We have shown that IMRT results in sparing of organs at risk without a significant increase in integral dose.

  3. Postoperative radiation in esophageal squamous cell carcinoma and target volume delineation

    PubMed Central

    Zhu, Yingming; Li, Minghuan; Kong, Li; Yu, Jinming

    2016-01-01

    Esophageal cancer is the sixth leading cause of cancer death worldwide, and patients who are treated with surgery alone, without neoadjuvant therapies, experience frequent relapses. Whether postoperative therapies could reduce the recurrence or improve overall survival is still controversial for these patients. The purpose of our review is to figure out the value of postoperative adjuvant therapy and address the disputes about target volume delineation according to published data. Based on the evidence of increased morbidity and disadvantages on patient survival caused by postoperative chemotherapy or radiotherapy (RT) alone provided by studies in the early 1990s, the use of postoperative adjuvant therapies in cases of esophageal squamous cell carcinoma has diminished substantially and has been replaced gradually by neoadjuvant chemoradiation. With advances in surgery and RT, accumulating evidence has recently rekindled interest in the delivery of postoperative RT or chemoradiotherapy in patients with stage T3/T4 or N1 (lymph node positive) carcinomas after radical surgery. However, due to complications with the standard radiation field, a nonconforming modified field has been adopted in most studies. Therefore, we analyze different field applications and provide suggestions on the optimization of the radiation field based on the major sites of relapse and the surgical non-clearance area. For upper and middle thoracic esophageal carcinomas, the bilateral supraclavicular and superior mediastinal areas remain common sites of recurrence and should be encompassed within the clinical target volume. In contrast, a consensus has yet to be reached regarding lower thoracic esophageal carcinomas; the “standard” clinical target volume is still recommended. Further studies of larger sample sizes should focus on different recurrence patterns, categorized by tumor locations, refined classifications, and differing molecular biology, to provide more information on the

  4. ALK Signaling and Target Therapy in Anaplastic Large Cell Lymphoma

    PubMed Central

    Tabbó, Fabrizio; Barreca, Antonella; Piva, Roberto; Inghirami, Giorgio

    2012-01-01

    The discovery by Morris et al. (1994) of the genes contributing to the t(2;5)(p23;q35) translocation has laid the foundation for a molecular based recognition of anaplastic large cell lymphoma and highlighted the need for a further stratification of T-cell neoplasia. Likewise the detection of anaplastic lymphoma kinase (ALK) genetic lesions among many human cancers has defined unique subsets of cancer patients, providing new opportunities for innovative therapeutic interventions. The objective of this review is to appraise the molecular mechanisms driving ALK-mediated transformation, and to maintain the neoplastic phenotype. The understanding of these events will allow the design and implementation of novel tailored strategies for a well-defined subset of cancer patients. PMID:22649787

  5. SU-E-T-578: On Definition of Minimum and Maximum Dose for Target Volume

    SciTech Connect

    Gong, Y; Yu, J; Xiao, Y

    2015-06-15

    Purpose: This study aims to investigate the impact of different minimum and maximum dose definitions in radiotherapy treatment plan quality evaluation criteria by using tumor control probability (TCP) models. Methods: Dosimetric criteria used in RTOG 1308 protocol are used in the investigation. RTOG 1308 is a phase III randomized trial comparing overall survival after photon versus proton chemoradiotherapy for inoperable stage II-IIIB NSCLC. The prescription dose for planning target volume (PTV) is 70Gy. Maximum dose (Dmax) should not exceed 84Gy and minimum dose (Dmin) should not go below 59.5Gy in order for the plan to be “per protocol” (satisfactory).A mathematical model that simulates the characteristics of PTV dose volume histogram (DVH) curve with normalized volume is built. The Dmax and Dmin are noted as percentage volumes Dη% and D(100-δ)%, with η and d ranging from 0 to 3.5. The model includes three straight line sections and goes through four points: D95%= 70Gy, Dη%= 84Gy, D(100-δ)%= 59.5 Gy, and D100%= 0Gy. For each set of η and δ, the TCP value is calculated using the inhomogeneously irradiated tumor logistic model with D50= 74.5Gy and γ50=3.52. Results: TCP varies within 0.9% with η; and δ values between 0 and 1. With η and η varies between 0 and 2, TCP change was up to 2.4%. With η and δ variations from 0 to 3.5, maximum of 8.3% TCP difference is seen. Conclusion: When defined maximum and minimum volume varied more than 2%, significant TCP variations were seen. It is recommended less than 2% volume used in definition of Dmax or Dmin for target dosimetric evaluation criteria. This project was supported by NIH grants U10CA180868, U10CA180822, U24CA180803, U24CA12014 and PA CURE Grant.

  6. Delineation of radiation therapy target volumes for patients with postoperative glioblastoma: a review

    PubMed Central

    Zhao, Fen; Li, Minghuan; Kong, Li; Zhang, Guoli; Yu, Jinming

    2016-01-01

    Glioblastoma is the most aggressive and lethal primary malignancy of the brain, and radiotherapy (RT) is a fundamental part of its treatment. However, the optimal radiation treatment conditions are still a matter of debate, and there is no clear consensus concerning the inclusion of peritumoral edema in the clinical target volume calculation. Target delineation calculations that use postoperative residual tumor and cavity volumes plus 2 cm margins result in smaller volumes of normal brain receiving high-dose irradiation, compared to calculations that include expanded edema. Smaller RT fields may be more appropriate than larger RT fields, possibly reducing the risk of late neurological deterioration, especially in patients with significant peritumoral edema. This review focuses on the factors influencing target delineation, such as peritumoral edema, failure patterns, and prognostic factors (clinical and pathological characteristics) of patients with glioblastoma. Based on this information, we make three suggestions for radiation oncologists to refer to in daily practice. Further study is necessary to investigate the unresolved problems related to routine clinical application of RT. PMID:27313465

  7. Toxicity Profile With a Large Prostate Volume After External Beam Radiotherapy for Localized Prostate Cancer

    SciTech Connect

    Pinkawa, Michael Fischedick, Karin; Asadpour, Branka; Gagel, Bernd; Piroth, Marc D.; Nussen, Sandra; Eble, Michael J.

    2008-01-01

    Purpose: To assess the impact of prostate volume on health-related quality of life (HRQOL) before and at different intervals after radiotherapy for prostate cancer. Methods and Materials: A group of 204 patients was surveyed prospectively before (Time A), at the last day (Time B), 2 months after (Time C), and 16 months (median) after (Time D) radiotherapy, with a validated questionnaire (Expanded Prostate Cancer Index Composite). The group was divided into subgroups with a small (11-43 cm{sup 3}) and a large (44-151 cm{sup 3}) prostate volume. Results: Patients with large prostates presented with lower urinary bother scores (median 79 vs. 89; p = 0.01) before treatment. Urinary function/bother scores for patients with large prostates decreased significantly compared to patients with small prostates due to irritative/obstructive symptoms only at Time B (pain with urination more than once daily in 48% vs. 18%; p < 0.01). Health-related quality of life did not differ significantly between both patient groups at Times C and D. In contrast to a large prostate, a small initial bladder volume (with associated higher dose-volume load) was predictive for lower urinary bother scores both in the acute and late phase; at Time B it predisposed for pollakiuria but not for pain. Patients with neoadjuvant hormonal therapy reached significantly lower HRQOL scores in several domains (affecting only incontinence in the urinary domain), despite a smaller prostate volume (34 cm{sup 3} vs. 47 cm{sup 3}; p < 0.01). Conclusions: Patients with a large prostate volume have a great risk of irritative/obstructive symptoms (particularly dysuria) in the acute radiotherapy phase. These symptoms recover rapidly and do not influence long-term HRQOL.

  8. Effects of large volume, ice-cold intravenous fluid infusion on respiratory function in cardiac arrest survivors.

    PubMed

    Jacobshagen, Claudius; Pax, Anja; Unsöld, Bernhard W; Seidler, Tim; Schmidt-Schweda, Stephan; Hasenfuss, Gerd; Maier, Lars S

    2009-11-01

    International guidelines for cardiopulmonary resuscitation recommend mild hypothermia (32-34 degrees C) for 12-24h in comatose survivors of cardiac arrest. To induce therapeutic hypothermia a variety of external and intravascular cooling devices are available. A cheap and effective method for inducing hypothermia is the infusion of large volume, ice-cold intravenous fluid. There are concerns regarding the effects of rapid infusion of large volumes of fluid on respiratory function in cardiac arrest survivors. We have retrospectively studied the effects of high volume cold fluid infusion on respiratory function in 52 resuscitated cardiac arrest patients. The target temperature of 32-34 degrees C was achieved after 4.1+/-0.5h (cooling rate 0.48 degrees C/h). During this period 3427+/-210 mL ice-cold fluid was infused. Despite significantly reduced LV-function (EF 35.8+/-2.2%) the respiratory status of these patients did not deteriorate significantly. On intensive care unit admission the mean PaO(2) was 231.4+/-20.6 mmHg at a F(i)O(2) of 0.82+/-0.03 (PaO(2)/F(i)O(2)=290.0+/-24.1) and a PEEP level of 7.14+/-0.31 mbar. Until reaching the target temperature of large volume, ice-cold fluid is an effective and inexpensive method for inducing therapeutic hypothermia. Resuscitation from cardiac arrest is associated with a deterioration in respiratory function. The infusion of large volumes of cold fluid does not cause a statistically significant further deterioration in respiratory function. A larger, randomized and prospective study is required to assess the efficacy and safety of ice-cold fluid infusion for

  9. Rapid estimate of solid volume in large tuff cores using a gas pycnometer

    SciTech Connect

    Thies, C.; Geddis, A.M.; Guzman, A.G.

    1996-09-01

    A thermally insulated, rigid-volume gas pycnometer system has been developed. The pycnometer chambers have been machined from solid PVC cylinders. Two chambers confine dry high-purity helium at different pressures. A thick-walled design ensures minimal heat exchange with the surrounding environment and a constant volume system, while expansion takes place between the chambers. The internal energy of the gas is assumed constant over the expansion. The ideal gas law is used to estimate the volume of solid material sealed in one of the chambers. Temperature is monitored continuously and incorporated into the calculation of solid volume. Temperature variation between measurements is less than 0.1{degrees}C. The data are used to compute grain density for oven-dried Apache Leap tuff core samples. The measured volume of solid and the sample bulk volume are used to estimate porosity and bulk density. Intrinsic permeability was estimated from the porosity and measured pore surface area and is compared to in-situ measurements by the air permeability method. The gas pycnometer accommodates large core samples (0.25 m length x 0.11 m diameter) and can measure solid volume greater than 2.20 cm{sup 3} with less than 1% error.

  10. Optimization of the electric field distribution in a large volume tissue-equivalent proportional counter.

    PubMed

    Verma, P K; Waker, A J

    1992-10-01

    Large volume tissue-equivalent proportional counters are of interest in radiation protection metrology, as the sensitivity in terms of counts per unit absorbed dose in these devices increases as the square of the counter diameter. Conventional solutions to the problem of maintaining a uniform electric field within a counter result in sensitive volume to total volume ratios which are unacceptably low when counter dimensions of the order of 15 cm diameter are considered and when overall compactness is an important design criterion. This work describes the design and optimization of an arrangement of field discs set at different potentials which enable sensitive volume to total volume ratios to approach unity. The method has been used to construct a 12.7 cm diameter right-cylindrical tissue-equivalent proportional counter in which the sensitive volume accounts for over 95% of the total device volume and the gas gain uniformity is maintained to within 3% along the entire length of the anode wire. PMID:1438550

  11. Mechanically Cooled Large-Volume Germanium Detector Systems for Nuclear Explosion Monitoring DOENA27323-1

    SciTech Connect

    Hull, E.L.

    2006-07-28

    Compact maintenance free mechanical cooling systems are being developed to operate large volume germanium detectors for field applications. To accomplish this we are utilizing a newly available generation of Stirling-cycle mechanical coolers to operate the very largest volume germanium detectors with no maintenance. The user will be able to leave these systems unplugged on the shelf until needed. The flip of a switch will bring a system to life in ~ 1 hour for measurements. The maintenance-free operating lifetime of these detector systems will exceed 5 years. These features are necessary for remote long-duration liquid-nitrogen free deployment of large-volume germanium gamma-ray detector systems for Nuclear Explosion Monitoring. The Radionuclide Aerosol Sampler/Analyzer (RASA) will greatly benefit from the availability of such detectors by eliminating the need for liquid nitrogen at RASA sites while still allowing the very largest available germanium detectors to be reliably utilized.

  12. A system for the disposal of large volumes of air containing oxygen-15

    NASA Astrophysics Data System (ADS)

    Peters, J. M.; Quaglia, L.; del Fiore, G.; Hannay, J.; Fissore, A.

    1991-01-01

    A method is described which permits large volumes of air containing the radionuclide 15O to be vented into the atmosphere. The short half-life of this isotope (124 s) enables use to be made of a large number of small vessels connected in series. Such a device has the effect of increasing the mean transit time. The system as installed results in a reduction of the radioactive concentration in the vented air to levels below the maximum permitted values.

  13. A New Electropositive Filter for Concentrating Enterovirus and Norovirus from Large Volumes of Water - MCEARD

    EPA Science Inventory

    The detection of enteric viruses in environmental water usually requires the concentration of viruses from large volumes of water. The 1MDS electropositive filter is commonly used for concentrating enteric viruses from water but unfortunately these filters are not cost-effective...

  14. Development of a Solid Phase Extraction Method for Agricultural Pesticides in Large-Volume Water Samples

    EPA Science Inventory

    An analytical method using solid phase extraction (SPE) and analysis by gas chromatography/mass spectrometry (GC/MS) was developed for the trace determination of a variety of agricultural pesticides and selected transformation products in large-volume high-elevation lake water sa...

  15. An efficient out-of-core volume ray casting method for the visualization of large medical data sets

    NASA Astrophysics Data System (ADS)

    Xue, Jian; Tian, Jie; Chen, Jian; Dai, Yakang

    2007-03-01

    Volume ray casting algorithm is widely recognized for high quality volume visualization. However, when rendering very large volume data sets, the original ray casting algorithm will lead to very inefficient random accesses in disk and make it very slowly to render the whole volume data set. In order to solve this problem, an efficient out-of-core volume ray casting method with a new out-of-core framework for processing large volume data sets based on consumer PC hardware is proposed in this paper. The new framework gives a transparent and efficient access to the volume data set cached in disk, while the new volume ray casting method minimizes the data exchange between hard disk and physical memory and performs comparatively fast high quality volume rendering. The experimental results indicate that the new method and framework are effective and efficient for the visualization of very large medical data sets.

  16. Optimized planning target volume margin in helical tomotherapy for prostate cancer: Is there a preferred method?

    NASA Astrophysics Data System (ADS)

    Cao, Yuan Jie; Lee, Suk; Chang, Kyung Hwan; Shim, Jang Bo; Kim, Kwang Hyeon; Jang, Min Sun; Yoon, Won Sup; Yang, Dae Sik; Park, Young Je; Kim, Chul Yong

    2015-07-01

    We compare the dosimetrical differences between plans generated for helical tomotherapy by using the 2D or 3D the margining technique for the treatment of prostate cancer. Ten prostate cancer patients were included in this study. For 2D plans, the planning target volume (PTV) was created by adding 5 mm (lateral/anterior-posterior) to the clinical target volume (CTV). For 3D plans, a 5-mm margin was added not only lateral/anterior-posterior, but also superior-inferior, to the CTV. Various dosimetrical indices, including the prescription isodose to target volume (PITV) ratio, conformity index (CI), homogeneity index (HI), target coverage index (TCI), modified dose homogeneity index (MHI), conformation number (CN), critical organ scoring index (COSI), and quality factor (QF) were determined to compare the different treatment plans. Differences between the 2D and the 3D PTV indices were not significant except for the CI (p = 0.023). 3D margin plans (11195 MUs) resulted in higher (13.0%) monitor units than 2D margin plans (9728 MUs). There were no significant differences in any organs at risk (OARs) between the 2D and the 3D plans. Overall, the average dose for the 2D plan was slightly lower than that for the 3D plan dose. Compared to the 2D plan, the 3D plan increased the average treatment time by 1.5 minutes; however, this difference was not statistically significant (p = 0.082). We confirmed that the 2D and the 3D margin plans were not significantly different with regard to various dosimetric indices such as the PITV, CI, and HI for PTV and the OARs with tomotherapy.

  17. Evaluation of Bacillus oleronius as a Biological Indicator for Terminal Sterilization of Large-Volume Parenterals.

    PubMed

    Izumi, Masamitsu; Fujifuru, Masato; Okada, Aki; Takai, Katsuya; Takahashi, Kazuhiro; Udagawa, Takeshi; Miyake, Makoto; Naruyama, Shintaro; Tokuda, Hiroshi; Nishioka, Goro; Yoden, Hikaru; Aoki, Mitsuo

    2016-01-01

    In the production of large-volume parenterals in Japan, equipment and devices such as tanks, pipework, and filters used in production processes are exhaustively cleaned and sterilized, and the cleanliness of water for injection, drug materials, packaging materials, and manufacturing areas is well controlled. In this environment, the bioburden is relatively low, and less heat resistant compared with microorganisms frequently used as biological indicators such as Geobacillus stearothermophilus (ATCC 7953) and Bacillus subtilis 5230 (ATCC 35021). Consequently, the majority of large-volume parenteral solutions in Japan are manufactured under low-heat sterilization conditions of F0 <2 min, so that loss of clarity of solutions and formation of degradation products of constituents are minimized. Bacillus oleronius (ATCC 700005) is listed as a biological indicator in "Guidance on the Manufacture of Sterile Pharmaceutical Products Produced by Terminal Sterilization" (guidance in Japan, issued in 2012). In this study, we investigated whether B. oleronius is an appropriate biological indicator of the efficacy of low-heat, moist-heat sterilization of large-volume parenterals. Specifically, we investigated the spore-forming ability of this microorganism in various cultivation media and measured the D-values and z-values as parameters of heat resistance. The D-values and z-values changed depending on the constituents of large-volume parenteral products. Also, the spores from B. oleronius showed a moist-heat resistance that was similar to or greater than many of the spore-forming organisms isolated from Japanese parenteral manufacturing processes. Taken together, these results indicate that B. oleronius is suitable as a biological indicator for sterility assurance of large-volume parenteral solutions subjected to low-heat, moist-heat terminal sterilization. PMID:26889054

  18. Understanding Subcutaneous Tissue Pressure for Engineering Injection Devices for Large-Volume Protein Delivery.

    PubMed

    Doughty, Diane V; Clawson, Corbin Z; Lambert, William; Subramony, J Anand

    2016-07-01

    Subcutaneous injection allows for self-administration of monoclonal antibodies using prefilled syringes, autoinjectors, and on-body injector devices. However, subcutaneous injections are typically limited to 1 mL due to concerns of injection pain from volume, viscosity, and formulation characteristics. Back pressure can serve as an indicator for changes in subcutaneous mechanical properties leading to pain during injection. The purpose of this study was to investigate subcutaneous pressures and injection site reactions as a function of injection volume and flow rate. A pressure sensor in the fluid path recorded subcutaneous pressures in the abdomen of Yorkshire swine. The subcutaneous tissue accommodates large-volume injections and with little back pressure as long as low flow rates are used. A 1 mL injection in 10 seconds (360 mL/h flow rate) generated a pressure of 24.0 ± 3.4 kPa, whereas 10 mL delivered in 10 minutes (60 mL/h flow rate) generated a pressure of 7.4 ± 7.8 kPa. After the injection, the pressure decays to 0 over several seconds. The subcutaneous pressures and mechanical strain increased with increasing flow rate but not increasing dose volume. These data are useful for the design of injection devices to mitigate back pressure and pain during subcutaneous large-volume injection. PMID:27287520

  19. Large Eddy Simulations of Volume Restriction Effects on Canopy-Induced Increased-Uplift Regions

    NASA Astrophysics Data System (ADS)

    Chatziefstratiou, E.; Bohrer, G.; Velissariou, V.

    2012-12-01

    ABSTRACT Previous modeling and empirical work have shown the development of important areas of increased uplift past forward-facing steps, and recirculation zones past backward-facing steps. Forests edges represent a special kind of step - a semi-porous one. Current models of the effects of forest edges on the flow represent the forest with a prescribed drag term and does not account for the effects of the solid volume in the forest that restrict the airflow. The RAMS-based Forest Large Eddy Simulation (RAFLES) resolves flows inside and above forested canopies. RAFLES is spatially explicit, and uses the finite volume method to solve a descretized set of Navier-Stokes equations. It accounts for vegetation drag effects on the flow and on the flux exchange between the canopy and the canopy air, proportional to the local leaf density. For a better representation of the vegetation structure in the numerical grid within the canopy sub-domain, the model uses a modified version of the cut cell coordinate system. The hard volume of vegetation elements, in forests, or buildings, in urban environments, within each numerical grid cell is represented via a sub-grid-scale process that shrinks the open apertures between grid cells and reduces the open cell volume. We used RAFLES to simulate the effects of a canopy of varying foliage and stem densities on flow over virtual qube-shaped barriers under neutrally buoyant conditions. We explicitly tested the effects of the numerical representation of volume restriction, independent of the effects of the leaf drag by comparing drag-only simulations, where we prescribed no volume or aperture restriction to the flow, restriction-only simulations, where we prescribed no drag, and control simulations, where both drag and volume plus aperture restriction were included. Our simulations show that representation of the effects of the volume and aperture restriction due to obstacles to flow is important (figure 1) and leads to differences in the

  20. The large volume radiometric calorimeter system: A transportable device to measure scrap category plutonium

    SciTech Connect

    Duff, M.F.; Wetzel, J.R.; Breakall, K.L.; Lemming, J.F.

    1987-01-01

    An innovative design concept has been used to design a large volume calorimeter system. The new design permits two measuring cells to fit in a compact, nonevaporative environmental bath. The system is mounted on a cart for transportability. Samples in the power range of 0.50 to 12.0 W can be measured. The calorimeters will receive samples as large as 22.0 cm in diameter by 43.2 cm high, and smaller samples can be measured without lengthening measurement time or increasing measurement error by using specially designed sleeve adapters. This paper describes the design considerations, construction, theory, applications, and performance of the large volume calorimeter system. 2 refs., 5 figs., 1 tab.

  1. Target Volume Delineation for Partial Breast Radiotherapy Planning: Clinical Characteristics Associated with Low Interobserver Concordance

    SciTech Connect

    Petersen, Ross P.; Truong, Pauline T. Kader, Hosam A.; Berthelet, Eric; Lee, Junella C.; Hilts, Michelle L.; Kader, Adam S.; Beckham, Wayne A.; Olivotto, Ivo A.

    2007-09-01

    Purpose: To examine variability in target volume delineation for partial breast radiotherapy planning and evaluate characteristics associated with low interobserver concordance. Methods and Materials: Thirty patients who underwent planning CT for adjuvant breast radiotherapy formed the study cohort. Using a standardized scale to score seroma clarity and consensus contouring guidelines, three radiation oncologists independently graded seroma clarity and delineated seroma volumes for each case. Seroma geometric center coordinates, maximum diameters in three axes, and volumes were recorded. Conformity index (CI), the ratio of overlapping volume and encompassing delineated volume, was calculated for each case. Cases with CI {<=}0.50 were analyzed to identify features associated with low concordance. Results: The median time from surgery to CT was 42.5 days. For geometric center coordinates, variations from the mean were 0.5-1.1 mm and standard deviations (SDs) were 0.5-1.8 mm. For maximum seroma dimensions, variations from the mean and SDs were predominantly <5 mm, with the largest SDs observed in the medial-lateral axis. The mean CI was 0.61 (range, 0.27-0.84). Five cases had CI {<=}0.50. Conformity index was significantly associated with seroma clarity (p < 0.001) and seroma volume (p < 0.002). Features associated with reduced concordance included tissue stranding from the surgical cavity, proximity to muscle, dense breast parenchyma, and benign calcifications that may be mistaken for surgical clips. Conclusion: Variability in seroma contouring occurred in three dimensions, with the largest variations in the medial-lateral axis. Awareness of clinical features associated with reduced concordance may be applied toward training staff and refining contouring guidelines for partial breast radiotherapy trials.

  2. Cas9-Assisted Targeting of CHromosome segments CATCH enables one-step targeted cloning of large gene clusters

    PubMed Central

    Jiang, Wenjun; Zhao, Xuejin; Gabrieli, Tslil; Lou, Chunbo; Ebenstein, Yuval; Zhu, Ting F.

    2015-01-01

    The cloning of long DNA segments, especially those containing large gene clusters, is of particular importance to synthetic and chemical biology efforts for engineering organisms. While cloning has been a defining tool in molecular biology, the cloning of long genome segments has been challenging. Here we describe a technique that allows the targeted cloning of near-arbitrary, long bacterial genomic sequences of up to 100 kb to be accomplished in a single step. The target genome segment is excised from bacterial chromosomes in vitro by the RNA-guided Cas9 nuclease at two designated loci, and ligated to the cloning vector by Gibson assembly. This technique can be an effective molecular tool for the targeted cloning of large gene clusters that are often expensive to synthesize by gene synthesis or difficult to obtain directly by traditional PCR and restriction-enzyme-based methods. PMID:26323354

  3. Opto-electrical characterization and X-ray mapping of large-volume cadmium zinc telluride radiation detectors

    SciTech Connect

    Yang, G.; Bolotnikov, A.E.; Camarda, G.S.; Cui, Y.; Hossain, A.; Yao, H.W.; Kim, K.; and James, R.B.

    2009-04-13

    Large-volume cadmium zinc telluride (CZT) radiation detectors would greatly improve radiation detection capabilities and, therefore, attract extensive scientific and commercial interests. CZT crystals with volumes as large as hundreds of centimeters can be achieved today due to improvements in the crystal growth technology. However, the poor performance of large-volume CZT detectors is still a challenging problem affecting the commercialization of CZT detectors and imaging arrays. We have employed Pockels effect measurements and synchrotron X-ray mapping techniques to investigate the performance-limiting factors for large-volume CZT detectors. Experimental results with the above characterization methods reveal the non-uniform distribution of internal electric field of large-volume CZT detectors, which help us to better understand the responsible mechanism for the insufficient carrier collection in large-volume CZT detectors.

  4. Fabrication and testing of gas filled targets for large scale plasma experiments on Nova

    SciTech Connect

    Stone, G.F.; Spragge, M.; Wallace, R.J.; Rivers, C.J. |

    1995-03-06

    An experimental campaign on the Nova laser was started in July 1993 to study one st of target conditions for the point design of the National Ignition Facility (NIF). The targets were specified to investigate the current NIF target conditions--a plasma of {approximately}3 keV electron temperature and an electron density of {approximately}1.0 E + 21 cm{sup {minus}3}. A gas cell target design was chosen to confine as gas of {approximately}0.01 cm{sup 3} in volume at {approximately} 1 atmosphere. This paper will describe the major steps and processes necessary in the fabrication, testing and delivery of these targets for shots on the Nova Laser at LLNL.

  5. Retroperitoneal Sarcoma Target Volume and Organ at Risk Contour Delineation Agreement Among NRG Sarcoma Radiation Oncologists

    SciTech Connect

    Baldini, Elizabeth H.; Abrams, Ross A.; Bosch, Walter; Roberge, David; Haas, Rick L.M.; Catton, Charles N.; Indelicato, Daniel J.; Olsen, Jeffrey R.; Deville, Curtiland; Chen, Yen-Lin; Finkelstein, Steven E.; DeLaney, Thomas F.; Wang, Dian

    2015-08-01

    Purpose: The purpose of this study was to evaluate the variability in target volume and organ at risk (OAR) contour delineation for retroperitoneal sarcoma (RPS) among 12 sarcoma radiation oncologists. Methods and Materials: Radiation planning computed tomography (CT) scans for 2 cases of RPS were distributed among 12 sarcoma radiation oncologists with instructions for contouring gross tumor volume (GTV), clinical target volume (CTV), high-risk CTV (HR CTV: area judged to be at high risk of resulting in positive margins after resection), and OARs: bowel bag, small bowel, colon, stomach, and duodenum. Analysis of contour agreement was performed using the simultaneous truth and performance level estimation (STAPLE) algorithm and kappa statistics. Results: Ten radiation oncologists contoured both RPS cases, 1 contoured only RPS1, and 1 contoured only RPS2 such that each case was contoured by 11 radiation oncologists. The first case (RPS 1) was a patient with a de-differentiated (DD) liposarcoma (LPS) with a predominant well-differentiated (WD) component, and the second case (RPS 2) was a patient with DD LPS made up almost entirely of a DD component. Contouring agreement for GTV and CTV contours was high. However, the agreement for HR CTVs was only moderate. For OARs, agreement for stomach, bowel bag, small bowel, and colon was high, but agreement for duodenum (distorted by tumor in one of these cases) was fair to moderate. Conclusions: For preoperative treatment of RPS, sarcoma radiation oncologists contoured GTV, CTV, and most OARs with a high level of agreement. HR CTV contours were more variable. Further clarification of this volume with the help of sarcoma surgical oncologists is necessary to reach consensus. More attention to delineation of the duodenum is also needed.

  6. From anatomical to biological target volumes: the role of PET in radiation treatment planning

    PubMed Central

    Schinagl, D A X; Kaanders, J H A M; Oyen, W J G

    2006-01-01

    Progress in radiation oncology requires a re-evaluation of the methods of target volume delineation beyond anatomical localization. New molecular imaging techniques for tumour visualisation such as positron emission tomography (PET) provide insight into tumour characteristics and can be complementary to the anatomical data of computed tomography or magnetic resonance imaging. In this review, three issues are discussed: First, can PET identify a tumour more accurately? Second, can biological tumour characteristics be visualised? Third, can intratumoural heterogeneity of these characteristics be identified? PMID:17114062

  7. Constitutive modeling of large inelastic deformation of amorphous polymers: Free volume and shear transformation zone dynamics

    NASA Astrophysics Data System (ADS)

    Voyiadjis, George Z.; Samadi-Dooki, Aref

    2016-06-01

    Due to the lack of the long-range order in their molecular structure, amorphous polymers possess a considerable free volume content in their inter-molecular space. During finite deformation, these free volume holes serve as the potential sites for localized permanent plastic deformation inclusions which are called shear transformation zones (STZs). While the free volume content has been experimentally shown to increase during the course of plastic straining in glassy polymers, thermal analysis of stored energy due to the deformation shows that the STZ nucleation energy decreases at large plastic strains. The evolution of the free volume, and the STZs number density and nucleation energy during the finite straining are formulated in this paper in order to investigate the uniaxial post-yield softening-hardening behavior of the glassy polymers. This study shows that the reduction of the STZ nucleation energy, which is correlated with the free volume increase, brings about the post-yield primary softening of the amorphous polymers up to the steady-state strain value; and the secondary hardening is a result of the increased number density of the STZs, which is required for large plastic strains, while their nucleation energy is stabilized beyond the steady-state strain. The evolutions of the free volume content and STZ nucleation energy are also used to demonstrate the effect of the strain rate, temperature, and thermal history of the sample on its post-yield behavior. The obtained results from the model are compared with the experimental observations on poly(methyl methacrylate) which show a satisfactory consonance.

  8. Clinical target volume delineation in glioblastomas: pre-operative versus post-operative/pre-radiotherapy MRI

    PubMed Central

    Farace, P; Giri, M G; Meliadò, G; Amelio, D; Widesott, L; Ricciardi, G K; Dall'Oglio, S; Rizzotti, A; Sbarbati, A; Beltramello, A; Maluta, S; Amichetti, M

    2011-01-01

    Objectives Delineation of clinical target volume (CTV) is still controversial in glioblastomas. In order to assess the differences in volume and shape of the radiotherapy target, the use of pre-operative vs post-operative/pre-radiotherapy T1 and T2 weighted MRI was compared. Methods 4 CTVs were delineated in 24 patients pre-operatively and post-operatively using T1 contrast-enhanced (T1PRECTV and T1POSTCTV) and T2 weighted images (T2PRECTV and T2POSTCTV). Pre-operative MRI examinations were performed the day before surgery, whereas post-operative examinations were acquired 1 month after surgery and before chemoradiation. A concordance index (CI) was defined as the ratio between the overlapping and composite volumes. Results The volumes of T1PRECTV and T1POSTCTV were not statistically different (248 ± 88 vs 254 ± 101), although volume differences >100 cm3 were observed in 6 out of 24 patients. A marked increase due to tumour progression was shown in three patients. Three patients showed a decrease because of a reduced mass effect. A significant reduction occurred between pre-operative and post-operative T2 volumes (139 ± 68 vs 78 ± 59). Lack of concordance was observed between T1PRECTV and T1POSTCTV (CI = 0.67 ± 0.09), T2PRECTV and T2POSTCTV (CI = 0.39 ± 0.20) and comparing the portion of the T1PRECTV and T1POSTCTV not covered by that defined on T2PRECTV images (CI = 0.45 ± 0.16 and 0.44 ± 0.17, respectively). Conclusion Using T2 MRI, huge variations can be observed in peritumoural oedema, which are probably due to steroid treatment. Using T1 MRI, brain shifts after surgery and possible progressive enhancing lesions produce substantial differences in CTVs. Our data support the use of post-operative/pre-radiotherapy T1 weighted MRI for planning purposes. PMID:21045069

  9. Pyrometry in the Multianvil Press: New approach for temperature measurement in large volume press experiments

    NASA Astrophysics Data System (ADS)

    Sanehira, T.; Wang, Y.; Prakapenka, V.; Rivers, M. L.

    2008-12-01

    Temperature measurement in large volume press experiments has been based on thermocouple emf, which has well known problems: unknown pressure dependence of emf [e.g., 1], chemical reaction between thermocouple and other materials, deformation related texture development in the thermocouple wires [2], and so on. Thus, different techniques to measure temperatures in large volume press experiments other than thermocouples are required to measure accurate temperatures under high pressures. Here we report a new development using pyrometry in the multianvil press, where temperatures are derived on the basis of spectral radiometry. Several high pressure runs were conducted using the 1000 ton press with a DIA module installed at 13 ID-D GSECARS beamline at Advanced Photon Source (APS) [3]. The cubic pressure medium, 14 mm edge length, was made of soft-fired pyrophyllite with a graphite furnace. A moissanite (SiC) single crystal was built inside the pressure medium as a window for the thermal emission signal to go through. An MgO disk with 1.0 mm thickness was inserted in a gap between the top of the SiC crystal and thermocouple hot junction. The bottom of the window crystal was in direct contact with the tip of the anvil, which had a 1.5 mm diameter hole drilled all the way through the anvil axis. An optical fiber was inserted in this hole and the open end of fiber was in contact with the SiC crystal. Thermal spectral radiance from the inner cell assembly was obtained via the fiber and recorded by an Ocean Optics HP2000 spectrometer. The system response of spectrometer was calibrated by a tungsten ribbon ramp (OL550S, Optronic Laboratories, Inc.) with standard of spectral radiance. The cell assembly was compressed up to target value of 15 tons and then temperature was increased up to 1573 K. Radiation spectra were mainly obtained above 873 K and typical integration time was 1 ms or 10 ms. Data collection was done in the process of increase and decrease of temperature. In

  10. Lossless compression of very large volume data with fast dynamic access

    NASA Astrophysics Data System (ADS)

    Zhao, Rongkai; Tao, Tao; Gabriel, Michael; Belford, Geneva

    2002-09-01

    The volumetric data set is important in many scientific and biomedical fields. Since such sets may be extremely large, a compression method is critical to store and transmit them. To achieve a high compression rate, most of the existing volume compression methods are lossy, which is usually unacceptable in biomedical applications. We developed a new context-based non-linear prediction method to preprocess the volume data set in order to effectively lower the prediction entropy. The prediction error is further encoded using Huffman code. Unlike the conventional methods, the volume is divided into cubical blocks to take advantage of the data's spatial locality. Instead of building one Huffman tree for each block, we developed a novel binning algorithm that build a Huffman tree for each group (bin) of blocks. Combining all the effects above, we achieved an excellent compression rate compared to other lossless volume compression methods. In addition, an auxiliary data structure, Scalable Hyperspace File (SHSF) is used to index the huge volume so that we can obtain many other benefits including parallel construction, on-the-fly accessing of compressed data without global decompression, fast previewing, efficient background compressing, and scalability etc.

  11. A magnetic sorbent for the efficient and rapid extraction of organic micropollutants from large-volume environmental water samples.

    PubMed

    Zhang, Mancheng; Zhou, Qing; Li, Aimin; Shuang, Chendong; Wang, Wei; Wang, Mengqiao

    2013-11-01

    A magnetic solid-phase extraction (MSPE) method based on a novel magnetic sorbent was proposed for the extraction of target compounds from large-volume water samples. First, magnetic hypercrosslinked microspheres (NAND-1) were prepared via membrane emulsification-suspension polymerization and post crosslinking reaction. To ensure that the Fe3O4 nanoparticles could completely pass through the membrane without blocking the pores, oleic acid was used to modify the Fe3O4 nanoparticles, which enhanced lipophilicity and monodispersity of the magnetite nanoparticles. The obtained NAND-1 microspheres exhibited super paramagnetic characteristics and excellent magnetic responsiveness with a saturation magnetization of 2.53 emu/g. In addition, a uniform particle size (~8 μm) and a large average surface area (1303.59 m(2)/g) were also observed, which were both beneficial for the extraction of the target compounds. Thus, NAND-1 has the potential to simultaneously exhibit good extraction efficiencies toward different types of organic micropollutants (OMPs), including triazines, carbamazepine and diethyl phthalate. The conditions of the MSPE based on NAND-1 were optimized by single factor and orthogonal design experiments. This MSPE method needed only a small amount of sorbent (50mg/L) for the extraction of OMPs from a large-volume aquatic sample (5L) and reached equilibrium in a short amount of time (30 min). Moreover, the solution volume, the pH, and the salinity had insignificant influences on the extraction of the eight target OMPs. Under the optimum conditions, the recoveries of the eight OMPs calculated by analyzing the spiked samples were from 91.7% to 99.4%. The NAND-1 could be recycled ten times and still achieve recoveries of the eight OMPs higher than 86%. The limits of detection of the eight OMPs ranged from 1.76 to 27.56 ng/L, and the limits of quantification were from 5.71 to 92.05 ng/L. These results indicated that the proposed method, based on the use of NAND-1

  12. HYBRID BRIDGMAN ANVIL DESIGN: AN OPTICAL WINDOW FOR IN-SITU SPECTROSCOPY IN LARGE VOLUME PRESSES

    SciTech Connect

    Lipp, M J; Evans, W J; Yoo, C S

    2005-07-29

    The absence of in-situ optical probes for large volume presses often limits their application to high-pressure materials research. In this paper, we present a unique anvil/optical window-design for use in large volume presses, which consists of an inverted diamond anvil seated in a Bridgman type anvil. A small cylindrical aperture through the Bridgman anvil ending at the back of diamond anvil allows optical access to the sample chamber and permits direct optical spectroscopy measurements, such as ruby fluorescence (in-situ pressure) or Raman spectroscopy. This performance of this anvil-design has been demonstrated by loading KBr to a pressure of 14.5 GPa.

  13. Assembly, operation and disassembly manual for the Battelle Large Volume Water Sampler (BLVWS)

    SciTech Connect

    Thomas, V.W.; Campbell, R.M.

    1984-12-01

    Assembly, operation and disassembly of the Battelle Large Volume Water Sampler (BLVWS) are described in detail. Step by step instructions of assembly, general operation and disassembly are provided to allow an operator completely unfamiliar with the sampler to successfully apply the BLVWS to his research sampling needs. The sampler permits concentration of both particulate and dissolved radionuclides from large volumes of ocean and fresh water. The water sample passes through a filtration section for particle removal then through sorption or ion exchange beds where species of interest are removed. The sampler components which contact the water being sampled are constructed of polyvinylchloride (PVC). The sampler has been successfully applied to many sampling needs over the past fifteen years. 9 references, 8 figures.

  14. The large volume calorimeter for measuring the pressure cooker'' shipping container

    SciTech Connect

    Kasperski, P.W.; Duff, M.F.; Wetzel, J.R. ); Baker, L.B.; MacMurdo, K.W. )

    1991-01-01

    A precise, low wattage, large volume calorimeter system has been developed at Mound to measure two configurations of the 12081 containment vessel. This system was developed and constructed to perform verification measurements at the Savannah River Site. The calorimeter system has performance design specifications of {plus minus}0.3% error above the 2-watt level, and {plus minus}(0.03% plus 0.006 watts) at power levels below 2 watts (one sigma). Data collected during performance testing shows measurement errors well within this range, even down to 0.1-watt power levels. The development of this calorimeter shows that ultra-precise measurements can be achieved on extremely large volume sample configurations. 1 ref., 5 figs.

  15. Masked target transform volume clutter metric for human observer visual search modeling

    NASA Astrophysics Data System (ADS)

    Moore, Richard Kirk

    The Night Vision and Electronic Sensors Directorate (NVESD) develops an imaging system performance model to aid in the design and comparison of imaging systems for military use. It is intended to approximate visual task performance for a typical human observer with an imaging system of specified optical, electrical, physical, and environmental parameters. When modeling search performance, the model currently uses only target size and target-to-background contrast to describe a scene. The presence or absence of other non-target objects and textures in the scene also affect search performance, but NVESD's targeting task performance metric based time limited search model (TTP/TLS) does not currently account for them explicitly. Non-target objects in a scene that impact search performance are referred to as clutter. A universally accepted mathematical definition of clutter does not yet exist. Researchers have proposed a number of clutter metrics based on very different methods, but none account for display geometry or the varying spatial frequency sensitivity of the human visual system. After a review of the NVESD search model, properties of the human visual system, and a literature review of clutter metrics, the new masked target transform volume clutter metric will be presented. Next the results of an experiment designed to show performance variation due to clutter alone will be presented. Then, the results of three separate perception experiments using real or realistic search imagery will be used to show that the new clutter metric better models human observer search performance than the current NVESD model or any of the reviewed clutter metrics.

  16. Anti-de Sitter-space/conformal-field-theory correspondence and large-N volume independence

    SciTech Connect

    Poppitz, Erich; Uensal, Mithat

    2010-09-15

    We study the Eguchi-Kawai reduction in the strong-coupling domain of gauge theories via the gravity dual of N=4 super-Yang-Mills on R{sup 3}xS{sup 1}. We show that D-branes geometrize volume independence in the center-symmetric vacuum and give supergravity predictions for the range of validity of reduced large-N models at strong coupling.

  17. Rapid Adaptive Optical Recovery of Optimal Resolution over LargeVolumes

    PubMed Central

    Wang, Kai; Milkie, Dan; Saxena, Ankur; Engerer, Peter; Misgeld, Thomas; Bronner, Marianne E.; Mumm, Jeff; Betzig, Eric

    2014-01-01

    Using a de-scanned, laser-induced guide star and direct wavefront sensing, we demonstrate adaptive correction of complex optical aberrations at high numerical aperture and a 14 ms update rate. This permits us to compensate for the rapid spatial variation in aberration often encountered in biological specimens, and recover diffraction-limited imaging over large (> 240 μm)3 volumes. We applied this to image fine neuronal processes and subcellular dynamics within the zebrafish brain. PMID:24727653

  18. Characterization of stable brush-shaped large-volume plasma generated at ambient air

    SciTech Connect

    Tang Jie; Cao Wenqing; Zhao Wei; Wang Yishan; Duan Yixiang

    2012-01-15

    A brush-shaped, large-volume plasma was generated at ambient pressure with a dc power supply and flowing argon gas, as well as a narrow outlet slit. Based on the V-I curve and emission profiles obtained in our experiment, the plasma shows some typical glow discharge characteristics. The electron density in the positive column close to the anode is about 1.4x10{sup 14}cm{sup -3} high, which is desirable for generating abundant amounts of reactive species in the plasma. Emission spectroscopy diagnosis indicates that many reactive species, such as excited argon atoms, excited oxygen atoms, excited nitrogen molecules, OH and C{sub 2} radicals, etc., generated within the plasma are distributed symmetrically and uniformly, which is preferable to some chemical reactions in practical applications. Spectral measurement also shows that the concentration of some excited argon atoms increases with the argon flow rate when the applied voltage is unvaried, while that of these excited argon atoms declines with the discharge current in the normal/subnormal glow discharge mode with the argon flow rate fixed. The plasma size is about 15 mm x 1 mm x 19 mm (L, W, H), when 38-W of discharge power is used. Such a laminar brush-shaped large-volume plasma device ensures not only efficient utilization of the plasma gas, but also effective processing of objects with large volume and complicated structure that are susceptible to high temperatures.

  19. SDSS-III Baryon Oscillation Spectroscopic Survey data release 12: Galaxy target selection and large-scale structure catalogues

    SciTech Connect

    Reid, Beth; Ho, Shirley; Padmanabhan, Nikhil; Percival, Will J.; Tinker, Jeremy; Tojeiro, Rito; White, Marin; Daniel J. Einstein; Maraston, Claudia; Ross, Ashley J.; Sanchez, Ariel G.; Schlegel, David; Sheldon, Erin; Strauss, Michael A.; Thomas, Daniel; Wake, David; Beutler, Florian; Bizyaev, Dmitry; Bolton, Adam S.; Brownstein, Joel R.; Chuang, Chia -Hsun; Dawson, Kyle; Harding, Paul; Kitaura, Francisco -Shu; Leauthaud, Alexie; Masters, Karen; McBride, Cameron K.; More, Surhud; Olmstead, Matthew D.; Oravetz, Daniel; Nuza, Sebastian E.; Pan, Kaike; Parejko, John; Pforr, Janine; Prada, Francisco; Rodriguez-Torres, Sergio; Salazar-Albornoz, Salvador; Samushia, Lado; Schneider, Donald P.; Scoccola, Claudia G.; Simmons, Audrey; Vargas-Magana, Mariana

    2015-11-17

    The Baryon Oscillation Spectroscopic Survey (BOSS), part of the Sloan Digital Sky Survey (SDSS) III project, has provided the largest survey of galaxy redshifts available to date, in terms of both the number of galaxy redshifts measured by a single survey, and the effective cosmological volume covered. Key to analysing the clustering of these data to provide cosmological measurements is understanding the detailed properties of this sample. Potential issues include variations in the target catalogue caused by changes either in the targeting algorithm or properties of the data used, the pattern of spectroscopic observations, the spatial distribution of targets for which redshifts were not obtained, and variations in the target sky density due to observational systematics. We document here the target selection algorithms used to create the galaxy samples that comprise BOSS. We also present the algorithms used to create large-scale structure catalogues for the final Data Release (DR12) samples and the associated random catalogues that quantify the survey mask. The algorithms are an evolution of those used by the BOSS team to construct catalogues from earlier data, and have been designed to accurately quantify the galaxy sample. Furthermore, the code used, designated mksample, is released with this paper.

  20. SDSS-III Baryon Oscillation Spectroscopic Survey data release 12: Galaxy target selection and large-scale structure catalogues

    DOE PAGESBeta

    Reid, Beth; Ho, Shirley; Padmanabhan, Nikhil; Percival, Will J.; Tinker, Jeremy; Tojeiro, Rito; White, Marin; Daniel J. Einstein; Maraston, Claudia; Ross, Ashley J.; et al

    2015-11-17

    The Baryon Oscillation Spectroscopic Survey (BOSS), part of the Sloan Digital Sky Survey (SDSS) III project, has provided the largest survey of galaxy redshifts available to date, in terms of both the number of galaxy redshifts measured by a single survey, and the effective cosmological volume covered. Key to analysing the clustering of these data to provide cosmological measurements is understanding the detailed properties of this sample. Potential issues include variations in the target catalogue caused by changes either in the targeting algorithm or properties of the data used, the pattern of spectroscopic observations, the spatial distribution of targets formore » which redshifts were not obtained, and variations in the target sky density due to observational systematics. We document here the target selection algorithms used to create the galaxy samples that comprise BOSS. We also present the algorithms used to create large-scale structure catalogues for the final Data Release (DR12) samples and the associated random catalogues that quantify the survey mask. The algorithms are an evolution of those used by the BOSS team to construct catalogues from earlier data, and have been designed to accurately quantify the galaxy sample. Furthermore, the code used, designated mksample, is released with this paper.« less

  1. SDSS-III Baryon Oscillation Spectroscopic Survey Data Release 12: galaxy target selection and large-scale structure catalogues

    NASA Astrophysics Data System (ADS)

    Reid, Beth; Ho, Shirley; Padmanabhan, Nikhil; Percival, Will J.; Tinker, Jeremy; Tojeiro, Rita; White, Martin; Eisenstein, Daniel J.; Maraston, Claudia; Ross, Ashley J.; Sánchez, Ariel G.; Schlegel, David; Sheldon, Erin; Strauss, Michael A.; Thomas, Daniel; Wake, David; Beutler, Florian; Bizyaev, Dmitry; Bolton, Adam S.; Brownstein, Joel R.; Chuang, Chia-Hsun; Dawson, Kyle; Harding, Paul; Kitaura, Francisco-Shu; Leauthaud, Alexie; Masters, Karen; McBride, Cameron K.; More, Surhud; Olmstead, Matthew D.; Oravetz, Daniel; Nuza, Sebastián E.; Pan, Kaike; Parejko, John; Pforr, Janine; Prada, Francisco; Rodríguez-Torres, Sergio; Salazar-Albornoz, Salvador; Samushia, Lado; Schneider, Donald P.; Scóccola, Claudia G.; Simmons, Audrey; Vargas-Magana, Mariana

    2016-01-01

    The Baryon Oscillation Spectroscopic Survey (BOSS), part of the Sloan Digital Sky Survey (SDSS) III project, has provided the largest survey of galaxy redshifts available to date, in terms of both the number of galaxy redshifts measured by a single survey, and the effective cosmological volume covered. Key to analysing the clustering of these data to provide cosmological measurements is understanding the detailed properties of this sample. Potential issues include variations in the target catalogue caused by changes either in the targeting algorithm or properties of the data used, the pattern of spectroscopic observations, the spatial distribution of targets for which redshifts were not obtained, and variations in the target sky density due to observational systematics. We document here the target selection algorithms used to create the galaxy samples that comprise BOSS. We also present the algorithms used to create large-scale structure catalogues for the final Data Release (DR12) samples and the associated random catalogues that quantify the survey mask. The algorithms are an evolution of those used by the BOSS team to construct catalogues from earlier data, and have been designed to accurately quantify the galaxy sample. The code used, designated MKSAMPLE, is released with this paper.

  2. Three-dimensional digital holographic aperture synthesis for rapid and highly-accurate large-volume metrology

    NASA Astrophysics Data System (ADS)

    Crouch, Stephen; Kaylor, Brant M.; Barber, Zeb W.; Reibel, Randy R.

    2015-09-01

    Currently large volume, high accuracy three-dimensional (3D) metrology is dominated by laser trackers, which typically utilize a laser scanner and cooperative reflector to estimate points on a given surface. The dependency upon the placement of cooperative targets dramatically inhibits the speed at which metrology can be conducted. To increase speed, laser scanners or structured illumination systems can be used directly on the surface of interest. Both approaches are restricted in their axial and lateral resolution at longer stand-off distances due to the diffraction limit of the optics used. Holographic aperture ladar (HAL) and synthetic aperture ladar (SAL) can enhance the lateral resolution of an imaging system by synthesizing much larger apertures by digitally combining measurements from multiple smaller apertures. Both of these approaches only produce two-dimensional imagery and are therefore not suitable for large volume 3D metrology. We combined the SAL and HAL approaches to create a swept frequency digital holographic 3D imaging system that provides rapid measurement speed for surface coverage with unprecedented axial and lateral resolution at longer standoff ranges. The technique yields a "data cube" of Fourier domain data, which can be processed with a 3D Fourier transform to reveal a 3D estimate of the surface. In this paper, we provide the theoretical background for the technique and show experimental results based on an ultra-wideband frequency modulated continuous wave (FMCW) chirped heterodyne ranging system showing ~100 micron lateral and axial precisions at >2 m standoff distances.

  3. Effects of breathing variation on gating window internal target volume in respiratory gated radiation therapy

    SciTech Connect

    Cai Jing; McLawhorn, Robert; Read, Paul W.; Larner, James M.; Yin, Fang-fang; Benedict, Stanley H.; Sheng, Ke

    2010-08-15

    Purpose: To investigate the effects of breathing variation on gating window internal target volume (ITV{sub GW}) in respiratory gated radiation therapy. Method and Materials: Two-dimensional dynamic MRI (dMRI) of lung motion was acquired in ten volunteers and eight lung cancer patients. Resorted dMRI using 4DCT acquisition method (RedCAM) was generated for selected subjects by simulating the image rebinning process. A dynamic software generated phantom (dSGP) was created by moving a solid circle (to mimic the ''tumor'') with dMRI-determined motion trajectories. The gating window internal target area (ITA{sub GW}, 2D counterpart of ITV{sub GW}) was determined from both RedCAM and dSGP/dMRI. Its area (A), major axis (L1), minor axis (L2), and similarity (S) were calculated and compared. Results: In the phantom study of 3 cm tumor, measurements of the ITA{sub GW} from dSGP (A=10.0{+-}1.3 cm{sup 2}, L1=3.8{+-}0.4 cm, and L2=3.3{+-}0.1 cm) are significantly (p<0.001) greater than those from RedCAM (A=8.5{+-}0.7 cm{sup 2}, L1=3.5{+-}0.2 cm, and L2=3.1{+-}0.1 cm). Similarly, the differences are significantly greater (p<0.001) for the 1 cm tumor (A=1.9{+-}0.5 cm{sup 2}, L1=1.9{+-}0.4 cm, and L2=1.3{+-}0.1 cm in dSGP; A=1.3{+-}0.1 cm{sup 2}, L1=1.5{+-}0.2 cm, and L2=1.1{+-}0.1 cm in RedCAM). In patient studies, measurements of the ITA{sub GW} from dMRI (A=15.5{+-}8.2 cm{sup 2}, L1=5.0{+-}1.1 cm, and L2=3.8{+-}1.2 cm) are also significantly greater (p<0.05) than those from RedCAM (A=13.2{+-}8.5 cm{sup 2}, L1=4.3{+-}1.4 cm, and L2=3.7{+-}1.2 cm). Similarities were 0.9{+-}0.1, 0.8{+-}0.1, and 0.8{+-}0.1 in the 3 cm tumor phantom, 1 cm tumor phantom, and patient studies, respectively. Conclusion: ITV{sub GW} can be underestimated by 4DCT due to breathing variations. An additional margin may be needed to account for this potential error in generating a PTV{sub GW}. Cautions need to be taken when generating ITV{sub GW} from 4DCT in respiratory gated radiation therapy, especially

  4. Estimated limits of IMRT dose escalation using varied planning target volume margins

    NASA Astrophysics Data System (ADS)

    Goulet, Christopher C.; Herman, Michael G.; Hillman, David W.; Davis, Brian J.

    2008-07-01

    To estimate the limits of dose escalation for prostate cancer as a function of planning target volume (PTV) margins, the maximum achievable dose (MAD) was determined through iterative plan optimizations from data sets of 18 patients until the dose constraints for rectum, bladder and PTV could no longer be met. PTV margins of 10, 5 and 3 mm yielded a mean MAD of 83.0 Gy (range, 73.8-108.0 Gy), 113.1 Gy (range, 90.0-151.2 Gy) and 135.9 Gy (range, 102.6-189.0 Gy), respectively. All comparisons of MAD among margin groups were statistically significant (P < 0.001). Comparison of prostate volumes of 30-50 mL (n = 8) with volumes of 51-70 mL (n = 7) and 71-105 mL (n = 3) showed an inverse relationship with MAD. Decreases in PTV margin significantly decreased the PTV overlap of the rectum (P < 0.001 for all margin comparisons). With decreases in the PTV margin and maintenance of identical dose constraints, doses well above those currently prescribed for treatment of localized prostate cancer appear feasible. However, the dose escalation suggested by these findings is a theoretical estimate, and additional dose constraints will likely be necessary to limit toxicity to normal tissue.

  5. Dosimetric Advantages of Midventilation Compared With Internal Target Volume for Radiation Therapy of Pancreatic Cancer

    SciTech Connect

    Lens, Eelco Horst, Astrid van der; Versteijne, Eva; Tienhoven, Geertjan van; Bel, Arjan

    2015-07-01

    Purpose: The midventilation (midV) approach can be used to take respiratory-induced pancreatic tumor motion into account during radiation therapy. In this study, the dosimetric consequences for organs at risk and tumor coverage of using a midV approach compared with using an internal target volume (ITV) were investigated. Methods and Materials: For each of the 18 patients, 2 treatment plans (25 × 2.0 Gy) were created, 1 using an ITV and 1 using a midV approach. The midV dose distribution was blurred using the respiratory-induced motion from 4-dimensional computed tomography. The resulting planning target volume (PTV) coverage for this blurred dose distribution was analyzed; PTV coverage was required to be at least V{sub 95%} >98%. In addition, the change in PTV size and the changes in V{sub 10Gy}, V{sub 20Gy}, V{sub 30Gy}, V{sub 40Gy}, D{sub mean} and D{sub 2cc} for the stomach and for the duodenum were analyzed; differences were tested for significance using the Wilcoxon signed-rank test. Results: Using a midV approach resulted in sufficient target coverage. A highly significant PTV size reduction of 13.9% (P<.001) was observed. Also, all dose parameters for the stomach and duodenum, except the D{sub 2cc} of the duodenum, improved significantly (P≤.002). Conclusions: By using the midV approach to account for respiratory-induced tumor motion, a significant PTV reduction and significant dose reductions to the stomach and to the duodenum can be achieved when irradiating pancreatic tumors.

  6. Colorimetric paper-based detection of Escherichia coli, Salmonella spp., and Listeria monocytogenes from large volumes of agricultural water.

    PubMed

    Bisha, Bledar; Adkins, Jaclyn A; Jokerst, Jana C; Chandler, Jeffrey C; Pérez-Méndez, Alma; Coleman, Shannon M; Sbodio, Adrian O; Suslow, Trevor V; Danyluk, Michelle D; Henry, Charles S; Goodridge, Lawrence D

    2014-01-01

    This protocol describes rapid colorimetric detection of Escherichia coli, Salmonella spp., and Listeria monocytogenes from large volumes (10 L) of agricultural waters. Here, water is filtered through sterile Modified Moore Swabs (MMS), which consist of a simple gauze filter enclosed in a plastic cartridge, to concentrate bacteria. Following filtration, non-selective or selective enrichments for the target bacteria are performed in the MMS. For colorimetric detection of the target bacteria, the enrichments are then assayed using paper-based analytical devices (µPADs) embedded with bacteria-indicative substrates. Each substrate reacts with target-indicative bacterial enzymes, generating colored products that can be detected visually (qualitative detection) on the µPAD. Alternatively, digital images of the reacted µPADs can be generated with common scanning or photographic devices and analyzed using ImageJ software, allowing for more objective and standardized interpretation of results. Although the biochemical screening procedures are designed to identify the aforementioned bacterial pathogens, in some cases enzymes produced by background microbiota or the degradation of the colorimetric substrates may produce a false positive. Therefore, confirmation using a more discriminatory diagnostic is needed. Nonetheless, this bacterial concentration and detection platform is inexpensive, sensitive (0.1 CFU/ml detection limit), easy to perform, and rapid (concentration, enrichment, and detection are performed within approximately 24 hr), justifying its use as an initial screening method for the microbiological quality of agricultural water. PMID:24962090

  7. Colorimetric Paper-based Detection of Escherichia coli, Salmonella spp., and Listeria monocytogenes from Large Volumes of Agricultural Water

    PubMed Central

    Bisha, Bledar; Adkins, Jaclyn A.; Jokerst, Jana C.; Chandler, Jeffrey C.; Pérez-Méndez, Alma; Coleman, Shannon M.; Sbodio, Adrian O.; Suslow, Trevor V.; Danyluk, Michelle D.; Henry, Charles S.; Goodridge, Lawrence D.

    2014-01-01

    This protocol describes rapid colorimetric detection of Escherichia coli, Salmonella spp., and Listeria monocytogenes from large volumes (10 L) of agricultural waters. Here, water is filtered through sterile Modified Moore Swabs (MMS), which consist of a simple gauze filter enclosed in a plastic cartridge, to concentrate bacteria. Following filtration, non-selective or selective enrichments for the target bacteria are performed in the MMS. For colorimetric detection of the target bacteria, the enrichments are then assayed using paper-based analytical devices (µPADs) embedded with bacteria-indicative substrates. Each substrate reacts with target-indicative bacterial enzymes, generating colored products that can be detected visually (qualitative detection) on the µPAD. Alternatively, digital images of the reacted µPADs can be generated with common scanning or photographic devices and analyzed using ImageJ software, allowing for more objective and standardized interpretation of results. Although the biochemical screening procedures are designed to identify the aforementioned bacterial pathogens, in some cases enzymes produced by background microbiota or the degradation of the colorimetric substrates may produce a false positive. Therefore, confirmation using a more discriminatory diagnostic is needed. Nonetheless, this bacterial concentration and detection platform is inexpensive, sensitive (0.1 CFU/ml detection limit), easy to perform, and rapid (concentration, enrichment, and detection are performed within approximately 24 hr), justifying its use as an initial screening method for the microbiological quality of agricultural water. PMID:24962090

  8. Large scale optimization of beam weights under dose-volume restrictions.

    PubMed

    Langer, M; Brown, R; Urie, M; Leong, J; Stracher, M; Shapiro, J

    1990-04-01

    The problem of choosing weights for beams in a multifield plan which maximizes tumor dose under conditions that recognize the volume dependence of organ tolerance to radiation is considered, and its solution described. Structures are modelled as collections of discrete points, and the weighting problem described as a combinatorial linear program (LP). The combinatorial LP is solved as a mixed 0/1 integer program with appropriate restrictions on normal tissue dose. The method is illustrated through the assignment of weights to a set of 10 beams incident on a pelvic target. Dose-volume restrictions are placed on surrounding bowel, bladder, and rectum, and a limit placed on tumor dose inhomogeneity. Different tolerance restrictions are examined, so that the sensitivity of the target dose to changes in the normal tissue constraints may be explored. It is shown that the distributions obtained satisfy the posed constraints. The technique permits formal solution of the optimization problem, in a time short enough to meet the needs of treatment planners. PMID:2323977

  9. Large-N volume independence in conformal and confining gauge theories

    SciTech Connect

    Unsal, Mithat; Yaffe, Laurence G.; /Washington U., Seattle

    2010-08-26

    Consequences of large N volume independence are examined in conformal and confining gauge theories. In the large N limit, gauge theories compactified on R{sup d-k} x (S{sup 1}){sup k} are independent of the S{sup 1} radii, provided the theory has unbroken center symmetry. In particular, this implies that a large N gauge theory which, on R{sup d}, flows to an IR fixed point, retains the infinite correlation length and other scale invariant properties of the decompactified theory even when compactified on R{sup d-k} x (S{sup 1}){sup k}. In other words, finite volume effects are 1/N suppressed. In lattice formulations of vector-like theories, this implies that numerical studies to determine the boundary between confined and conformal phases may be performed on one-site lattice models. In N = 4 supersymmetric Yang-Mills theory, the center symmetry realization is a matter of choice: the theory on R{sup 4-k} x (S{sup 1}){sup k} has a moduli space which contains points with all possible realizations of center symmetry. Large N QCD with massive adjoint fermions and one or two compactified dimensions has a rich phase structure with an infinite number of phase transitions coalescing in the zero radius limit.

  10. Detection and Volume Estimation of Large Landslides by Using Multi-temporal Remote Sensing Data

    NASA Astrophysics Data System (ADS)

    Hsieh, Yu-chung; Hou, Chin-Shyong; Chan, Yu-Chang; Hu, Jyr-Ching; Fei, Li-Yuan; Chen, Hung-Jen; Chiu, Cheng-Lung

    2014-05-01

    Large landslides are frequently triggered by strong earthquakes and heavy rainfalls in the mountainous areas of Taiwan. The heavy rainfall brought by the Typhoon Morakot has triggered a large amount of landslides. The most unfortunate case occurred in the Xiaolin village, which was totally demolished by a catastrophic landslide in less than a minute. Continued and detailed study of the characteristics of large landslides is urgently needed to mitigate loss of lives and properties in the future. Traditionally known techniques cannot effectively extract landslide parameters, such as depth, amount and volume, which are essential in all the phases of landslide assessment. In addition, it is very important to record the changes of landslide deposits after the landslide events as accurately as possible to better understand the landslide erosion process. The acquisition of digital elevation models (DEMs) is considered necessary for achieving accurate, effective and quantitative landslide assessments. A new technique is presented in this study for quickly assessing extensive areas of large landslides. The technique uses DEMs extracted from several remote sensing approaches, including aerial photogrammetry, airborne LiDAR and UAV photogrammetry. We chose a large landslide event that occurred after Typhoon Sinlaku in Meiyuan the mount, central Taiwan in 2008. We collected and processed six data sets, including aerial photos, airborne LiDAR data and UAVphotos, at different times from 2005 to 2013. Our analyses show the landslide volume being 17.14 × 106 cubic meters, deposition volume being 12.75 × 106 cubic meters, and about 4.38 × 106 cubic meters being washed out of the region. Residual deposition ratio of this area is about 74% in 2008; while, after a few years, the residual deposition ratio is down below 50%. We also analyzed riverbed changes and sediment transfer patterns from 2005 to 2013 by multi-temporal remote sensing data with desirable accuracy. The developed

  11. A pyramid-based approach to visual exploration of a large volume of vehicle trajectory data

    NASA Astrophysics Data System (ADS)

    Sun, Jing; Li, Xiang

    2012-12-01

    Advances in positioning and wireless communicating technologies make it possible to collect large volumes of trajectory data of moving vehicles in a fast and convenient fashion. These data can be applied to traffic studies. Behind this application, a methodological issue that still requires particular attention is the way these data should be spatially visualized. Trajectory data physically consists of a large number of positioning points. With the dramatic increase of data volume, it becomes a challenge to display and explore these data. Existing commercial software often employs vector-based indexing structures to facilitate the display of a large volume of points, but their performance downgrades quickly when the number of points is very large, for example, tens of millions. In this paper, a pyramid-based approach is proposed. A pyramid method initially is invented to facilitate the display of raster images through the tradeoff between storage space and display time. A pyramid is a set of images at different levels with different resolutions. In this paper, we convert vector-based point data into raster data, and build a gridbased indexing structure in a 2D plane. Then, an image pyramid is built. Moreover, at the same level of a pyramid, image is segmented into mosaics with respect to the requirements of data storage and management. Algorithms or procedures on grid-based indexing structure, image pyramid, image segmentation, and visualization operations are given in this paper. A case study with taxi trajectory data in Shanghai is conducted. Results demonstrate that the proposed method outperforms the existing commercial software.

  12. Volume-staged radiosurgery for large arteriovenous malformations: an evolving paradigm.

    PubMed

    Seymour, Zachary A; Sneed, Penny K; Gupta, Nalin; Lawton, Michael T; Molinaro, Annette M; Young, William; Dowd, Christopher F; Halbach, Van V; Higashida, Randall T; McDermott, Michael W

    2016-01-01

    OBJECT Large arteriovenous malformations (AVMs) remain difficult to treat, and ideal treatment parameters for volume-staged stereotactic radiosurgery (VS-SRS) are still unknown. The object of this study was to compare VS-SRS treatment outcomes for AVMs larger than 10 ml during 2 eras; Era 1 was 1992-March 2004, and Era 2 was May 2004-2008. In Era 2 the authors prospectively decreased the AVM treatment volume, increased the radiation dose per stage, and shortened the interval between stages. METHODS All cases of VS-SRS treatment for AVM performed at a single institution were retrospectively reviewed. RESULTS Of 69 patients intended for VS-SRS, 63 completed all stages. The median patient age at the first stage of VS-SRS was 34 years (range 9-68 years). The median modified radiosurgery-based AVM score (mRBAS), total AVM volume, and volume per stage in Era 1 versus Era 2 were 3.6 versus 2.7, 27.3 ml versus 18.9 ml, and 15.0 ml versus 6.8 ml, respectively. The median radiation dose per stage was 15.5 Gy in Era 1 and 17.0 Gy in Era 2, and the median clinical follow-up period in living patients was 8.6 years in Era 1 and 4.8 years in Era 2. All outcomes were measured from the first stage of VS-SRS. Near or complete obliteration was more common in Era 2 (log-rank test, p = 0.0003), with 3- and 5-year probabilities of 5% and 21%, respectively, in Era 1 compared with 24% and 68% in Era 2. Radiosurgical dose, AVM volume per stage, total AVM volume, era, compact nidus, Spetzler-Martin grade, and mRBAS were significantly associated with near or complete obliteration on univariate analysis. Dose was a strong predictor of response (Cox proportional hazards, p < 0.001, HR 6.99), with 3- and 5-year probabilities of near or complete obliteration of 5% and 16%, respectively, at a dose < 17 Gy versus 23% and 74% at a dose ≥ 17 Gy. Dose per stage, compact nidus, and total AVM volume remained significant predictors of near or complete obliteration on multivariate analysis. Seventeen

  13. Very Large Area/Volume Microwave ECR Plasma and Ion Source

    NASA Technical Reports Server (NTRS)

    Foster, John E. (Inventor); Patterson, Michael J. (Inventor)

    2009-01-01

    The present invention is an apparatus and method for producing very large area and large volume plasmas. The invention utilizes electron cyclotron resonances in conjunction with permanent magnets to produce dense, uniform plasmas for long life ion thruster applications or for plasma processing applications such as etching, deposition, ion milling and ion implantation. The large area source is at least five times larger than the 12-inch wafers being processed to date. Its rectangular shape makes it easier to accommodate to materials processing than sources that are circular in shape. The source itself represents the largest ECR ion source built to date. It is electrodeless and does not utilize electromagnets to generate the ECR magnetic circuit, nor does it make use of windows.

  14. The complex aerodynamic footprint of desert locusts revealed by large-volume tomographic particle image velocimetry

    PubMed Central

    Henningsson, Per; Michaelis, Dirk; Nakata, Toshiyuki; Schanz, Daniel; Geisler, Reinhard; Schröder, Andreas; Bomphrey, Richard J.

    2015-01-01

    Particle image velocimetry has been the preferred experimental technique with which to study the aerodynamics of animal flight for over a decade. In that time, hardware has become more accessible and the software has progressed from the acquisition of planes through the flow field to the reconstruction of small volumetric measurements. Until now, it has not been possible to capture large volumes that incorporate the full wavelength of the aerodynamic track left behind during a complete wingbeat cycle. Here, we use a unique apparatus to acquire the first instantaneous wake volume of a flying animal's entire wingbeat. We confirm the presence of wake deformation behind desert locusts and quantify the effect of that deformation on estimates of aerodynamic force and the efficiency of lift generation. We present previously undescribed vortex wake phenomena, including entrainment around the wing-tip vortices of a set of secondary vortices borne of Kelvin–Helmholtz instability in the shear layer behind the flapping wings. PMID:26040598

  15. Generation of large volume hydrostatic pressure to 8 GPa for ultrasonic studies

    NASA Astrophysics Data System (ADS)

    Kozuki, Yasushi; Yoneda, Akira; Fujimura, Akio; Sawamoto, Hiroshi; Kumazawa, Mineo

    1986-09-01

    The design and performance of a liquid-solid hybrid cell to generate high hydrostatic pressures in a relatively large volume (for use in measurements of the pressure dependence of the physical properties of materials) are reported. A 4:1 methanol-ethanol mixture is employed in 12-mm-side and 20-mm-side versions of an eight-cubic-anvil apparatus driven by a 10-kt press. Pressures up to 8 GPa are obtained safely in a 16-cu cm volume by applying uniaxial force of 3 kt. The cell is used to obtain measurements of the velocity of ultrasonic waves in fused quartz: the experimental setup is described, and sample results are presented graphically.

  16. Digital fringe projection system for large-volume 360-deg shape measurement

    NASA Astrophysics Data System (ADS)

    Sitnik, Robert; Kujawinska, Malgorzata; Woznicki, Jerzy M.

    2002-02-01

    We present a system for 3-D shape measurement in large volumes based on combined digital-fringe--Gray-code projection. With the help of a new calibration procedure, the system provides accurate results despite its crossed-axis configuration and unknown aberrations of the digital light projector and CCD camera. Also, the separate clouds of points captured from different directions are automatically merged into the main cloud. The system delivers results in the form of (x,y,z) coordinates of the object points with additional (R,G,B) color information about their texture. Applicability of the system is proven by presenting sample results of measurements performed on complex objects. The uncertainty of the system was estimated at 10 -4 of the measurement volume.

  17. The complex aerodynamic footprint of desert locusts revealed by large-volume tomographic particle image velocimetry.

    PubMed

    Henningsson, Per; Michaelis, Dirk; Nakata, Toshiyuki; Schanz, Daniel; Geisler, Reinhard; Schröder, Andreas; Bomphrey, Richard J

    2015-07-01

    Particle image velocimetry has been the preferred experimental technique with which to study the aerodynamics of animal flight for over a decade. In that time, hardware has become more accessible and the software has progressed from the acquisition of planes through the flow field to the reconstruction of small volumetric measurements. Until now, it has not been possible to capture large volumes that incorporate the full wavelength of the aerodynamic track left behind during a complete wingbeat cycle. Here, we use a unique apparatus to acquire the first instantaneous wake volume of a flying animal's entire wingbeat. We confirm the presence of wake deformation behind desert locusts and quantify the effect of that deformation on estimates of aerodynamic force and the efficiency of lift generation. We present previously undescribed vortex wake phenomena, including entrainment around the wing-tip vortices of a set of secondary vortices borne of Kelvin-Helmholtz instability in the shear layer behind the flapping wings. PMID:26040598

  18. Dynamic dialysis: an efficient technique for large-volume sample desalting.

    PubMed

    Yuan, Peng; Le, Zhen; Zhong, Lipeng; Huang, Chunhong

    2015-08-18

    Dialysis is a well-known technique for laboratory separation. However, its efficiency is commonly restricted by the dialyzer volume and its passive diffusion manner. In addition, the sample is likely to be precipitated and inactive during a long dialysis process. To overcome these drawbacks, a dynamic dialysis method was described and evaluated. The dynamic dialysis was performed by two peristaltic pumps working in reverse directions, in order to drive countercurrent parallel flow of sample and buffer, respectively. The efficiency and capacity of this dynamic dialysis method was evaluated by recording and statistically comparing the variation of conductance from retentate under different conditions. The dynamic method was proven to be effective in dialyzing a large-volume sample, and its efficiency changes proportionally to the flow rate of sample. To sum up, circulating the sample and the buffer creates the highest possible concentration gradient to significantly improve dialysis capacity and shorten dialysis time. PMID:25036273

  19. Mechanically Cooled Large-Volume Germanium Detector Systems for Neclear Explosion Monitoring DOENA27323-2

    SciTech Connect

    Hull, E.L.

    2006-10-30

    Compact maintenance free mechanical cooling systems are being developed to operate large volume high-resolution gamma-ray detectors for field applications. To accomplish this we are utilizing a newly available generation of Stirling-cycle mechanical coolers to operate the very largest volume germanium detectors with no maintenance. The user will be able to leave these systems unplugged on the shelf until needed. The maintenance-free operating lifetime of these detector systems will exceed 5 years. Three important factors affect the operation of mechanically cooled germanium detectors: temperature, vacuum, and vibration. These factors will be studied in the laboratory at the most fundamental levels to insure a solid understanding of the physical limitations each factor places on a practical mechanically cooled germanium detector system. Using this knowledge, mechanically cooled germanium detector prototype systems will be designed and fabricated.

  20. Evaluation of potential internal target volume of liver tumors using cine-MRI

    SciTech Connect

    Akino, Yuichi; Oh, Ryoong-Jin; Masai, Norihisa; Shiomi, Hiroya; Inoue, Toshihiko

    2014-11-01

    Purpose: Four-dimensional computed tomography (4DCT) is widely used for evaluating moving tumors, including lung and liver cancers. For patients with unstable respiration, however, the 4DCT may not visualize tumor motion properly. High-speed magnetic resonance imaging (MRI) sequences (cine-MRI) permit direct visualization of respiratory motion of liver tumors without considering radiation dose exposure to patients. Here, the authors demonstrated a technique for evaluating internal target volume (ITV) with consideration of respiratory variation using cine-MRI. Methods: The authors retrospectively evaluated six patients who received stereotactic body radiotherapy (SBRT) to hepatocellular carcinoma. Before acquiring planning CT, sagittal and coronal cine-MRI images were acquired for 30 s with a frame rate of 2 frames/s. The patient immobilization was conducted under the same condition as SBRT. Planning CT images were then acquired within 15 min from cine-MRI image acquisitions, followed by a 4DCT scan. To calculate tumor motion, the motion vectors between two continuous frames of cine-MRI images were calculated for each frame using the pyramidal Lucas–Kanade method. The target contour was delineated on one frame, and each vertex of the contour was shifted and copied onto the following frame using neighboring motion vectors. 3D trajectory data were generated with the centroid of the contours on sagittal and coronal images. To evaluate the accuracy of the tracking method, the motion of clearly visible blood vessel was analyzed with the motion tracking and manual detection techniques. The target volume delineated on the 50% (end-exhale) phase of 4DCT was translated with the trajectory data, and the distribution of the occupancy probability of target volume was calculated as potential ITV (ITV {sub Potential}). The concordance between ITV {sub Potential} and ITV estimated with 4DCT (ITV {sub 4DCT}) was evaluated using the Dice’s similarity coefficient (DSC). Results

  1. [Postoperative radiotherapy for non-small cell lung cancer: Efficacy, target volume, dose].

    PubMed

    Dupic, G; Bellière-Calandry, A

    2016-04-01

    The rate of local failure of stage IIIA-N2 non-small cell lung cancer is 20 to 40%, even if they are managed with surgery and adjuvant chemotherapy. Postoperative radiotherapy improves local control, but its benefit on global survival remains to be demonstrated. Considered for many years as an adjuvant treatment option for pN2 cancers, it continues nevertheless to be deemed too toxic. What is the current status of postoperative radiotherapy? The Lung Adjuvant Radiotherapy Trial (Lung ART) phase III trial should give us a definitive, objective response on global survival, but inclusion of patients is difficult. The results are consequently delayed. The aim of this review is to show all the results about efficacy and tolerance of postoperative radiotherapy and to define the target volume and dose to prescribe. PMID:26996789

  2. A Novel Technique for Endovascular Removal of Large Volume Right Atrial Tumor Thrombus

    SciTech Connect

    Nickel, Barbara; McClure, Timothy Moriarty, John

    2015-08-15

    Venous thromboembolic disease is a significant cause of morbidity and mortality, particularly in the setting of large volume pulmonary embolism. Thrombolytic therapy has been shown to be a successful treatment modality; however, its use somewhat limited due to the risk of hemorrhage and potential for distal embolization in the setting of large mobile thrombi. In patients where either thrombolysis is contraindicated or unsuccessful, and conventional therapies prove inadequate, surgical thrombectomy may be considered. We present a case of percutaneous endovascular extraction of a large mobile mass extending from the inferior vena cava into the right atrium using the Angiovac device, a venovenous bypass system designed for high-volume aspiration of undesired endovascular material. Standard endovascular methods for removal of cancer-associated thrombus, such as catheter-directed lysis, maceration, and exclusion, may prove inadequate in the setting of underlying tumor thrombus. Where conventional endovascular methods either fail or are unsuitable, endovascular thrombectomy with the Angiovac device may be a useful and safe minimally invasive alternative to open resection.

  3. Large intestine-targeted nanoparticle-releasing oral vaccine to control genitorectal viral infection

    PubMed Central

    Zhu, Qing; Talton, James; Zhang, Guofeng; Cunningham, Tshaka; Wang, Zijian; Waters, Robert C.; Kirk, James; Eppler, Bärbel; Dennis M, Klinman; Sui, Yongjun; Gagnon, Susan; Belyakov, Igor M.; Mumper, Russell J.; Berzofsky, Jay A.

    2012-01-01

    Both rectal and vaginal mucosal surfaces serve as transmission routes for pathogenic microorganisms. Vaccination through large intestinal mucosa, previously proven protective for both mucosal sites in animal studies, can be achieved successfully by direct intra-colorectal (i.c.r.) administration, which is, however, clinically impractical. Oral delivery seems preferable, but risks vaccine destruction in the upper gastrointestinal tract. Therefore, we designed a large intestine-targeted oral delivery with pH-dependent microparticles containing vaccine nanoparticles, which induced colorectal immunity in mice comparably to colorectal vaccination and protected against rectal or vaginal viral challenge. Conversely, vaccine targeted to the small intestine induced only small intestinal immunity and provided no rectal or vaginal protection, demonstrating functional compartmentalization within the gut mucosal immune system. Therefore, using this oral vaccine delivery system to target the large intestine, but not the small intestine, may represent a feasible novel strategy for immune protection of rectal and vaginal mucosa. PMID:22797811

  4. Dosimetric evaluation of planning target volume margin reduction for prostate cancer via image-guided intensity-modulated radiation therapy

    NASA Astrophysics Data System (ADS)

    Hwang, Taejin; Kang, Sei-Kwon; Cheong, Kwang-Ho; Park, Soah; Yoon, Jai-Woong; Han, Taejin; Kim, Haeyoung; Lee, Meyeon; Kim, Kyoung-Joo; Bae, Hoonsik; Suh, Tae-Suk

    2015-07-01

    The aim of this study was to quantitatively estimate the dosimetric benefits of the image-guided radiation therapy (IGRT) system for the prostate intensity-modulated radiation therapy (IMRT) delivery. The cases of eleven patients who underwent IMRT for prostate cancer without a prostatectomy at our institution between October 2012 and April 2014 were retrospectively analyzed. For every patient, clinical target volume (CTV) to planning target volume (PTV) margins were uniformly used: 3 mm, 5 mm, 7 mm, 10 mm, 12 mm, and 15 mm. For each margin size, the IMRT plans were independently optimized by one medical physicist using Pinnalce3 (ver. 8.0.d, Philips Medical System, Madison, WI) in order to maintain the plan quality. The maximum geometrical margin (MGM) for every CT image set, defined as the smallest margin encompassing the rectum at least at one slice, was between 13 mm and 26 mm. The percentage rectum overlapping PTV (%V ROV ), the rectal normal tissue complication probability (NTCP) and the mean rectal dose (%RD mean ) increased in proportion to the increase of PTV margin. However the bladder NTCP remained around zero to some extent regardless of the increase of PTV margin while the percentage bladder overlapping PTV (%V BOV ) and the mean bladder dose (%BD mean ) increased in proportion to the increase of PTV margin. Without relatively large rectum or small bladder, the increase observed for rectal NTCP, %RDmean and %BD mean per 1-mm PTV margin size were 1.84%, 2.44% and 2.90%, respectively. Unlike the behavior of the rectum or the bladder, the maximum dose on each femoral head had little effect on PTV margin. This quantitative study of the PTV margin reduction supported that IG-IMRT has enhanced the clinical effects over prostate cancer with the reduction of normal organ complications under the similar level of PTV control.

  5. Targeted Large-Scale Deletion of Bacterial Genomes Using CRISPR-Nickases

    PubMed Central

    2015-01-01

    Programmable CRISPR-Cas systems have augmented our ability to produce precise genome manipulations. Here we demonstrate and characterize the ability of CRISPR-Cas derived nickases to direct targeted recombination of both small and large genomic regions flanked by repetitive elements in Escherichia coli. While CRISPR directed double-stranded DNA breaks are highly lethal in many bacteria, we show that CRISPR-guided nickase systems can be programmed to make precise, nonlethal, single-stranded incisions in targeted genomic regions. This induces recombination events and leads to targeted deletion. We demonstrate that dual-targeted nicking enables deletion of 36 and 97 Kb of the genome. Furthermore, multiplex targeting enables deletion of 133 Kb, accounting for approximately 3% of the entire E. coli genome. This technology provides a framework for methods to manipulate bacterial genomes using CRISPR-nickase systems. We envision this system working synergistically with preexisting bacterial genome engineering methods. PMID:26451892

  6. Localization Accuracy of the Clinical Target Volume During Image-Guided Radiotherapy of Lung Cancer

    SciTech Connect

    Hugo, Geoffrey D.; Weiss, Elisabeth; Badawi, Ahmed; Orton, Matthew

    2011-10-01

    Purpose: To evaluate the position and shape of the originally defined clinical target volume (CTV) over the treatment course, and to assess the impact of gross tumor volume (GTV)-based online computed tomography (CT) guidance on CTV localization accuracy. Methods and Materials: Weekly breath-hold CT scans were acquired in 17 patients undergoing radiotherapy. Deformable registration was used to propagate the GTV and CTV from the first weekly CT image to all other weekly CT images. The on-treatment CT scans were registered rigidly to the planning CT scan based on the GTV location to simulate online guidance, and residual error in the CTV centroids and borders was calculated. Results: The mean GTV after 5 weeks relative to volume at the beginning of treatment was 77% {+-} 20%, whereas for the prescribed CTV, it was 92% {+-} 10%. The mean absolute residual error magnitude in the CTV centroid position after a GTV-based localization was 2.9 {+-} 3.0 mm, and it varied from 0.3 to 20.0 mm over all patients. Residual error of the CTV centroid was associated with GTV regression and anisotropy of regression during treatment (p = 0.02 and p = 0.03, respectively; Spearman rank correlation). A residual error in CTV border position greater than 2 mm was present in 77% of patients and 50% of fractions. Among these fractions, residual error of the CTV borders was 3.5 {+-} 1.6 mm (left-right), 3.1 {+-} 0.9 mm (anterior-posterior), and 6.4 {+-} 7.5 mm (superior-inferior). Conclusions: Online guidance based on the visible GTV produces substantial error in CTV localization, particularly for highly regressing tumors. The results of this study will be useful in designing margins for CTV localization or for developing new online CTV localization strategies.

  7. Picosecond laser-driven terahertz radiation from large scale preplasmas of solid targets

    NASA Astrophysics Data System (ADS)

    Liao, G. Q.; Li, Y. T.; Li, C.; Su, L. N.; Zheng, Y.; Liu, M.; Dunn, J.; Nilsen, J.; Hunter, J.; Wang, W. M.; Sheng, Z. M.; Zhang, J.

    2016-05-01

    The terahertz (THz) radiation from the front of solid targets with a large-scale preplasma irradiated by relativistic picosecond laser pulses has been studied. The THz radiation measured at the specular direction nonlinearly increases with laser energy and an optimal plasma density scalelength is observed. Particle-in-cell simulations indicate that the radiation can be attributed to the model of mode conversion. While the THz radiation near the target normal direction is saturated with laser energy and plasma scalelength. Unlike the radiation in the specular direction’ the transient current formed at the plasma-vacuum interface could be responsible for the radiation near the target normal.

  8. RTOG Sarcoma Radiation Oncologists Reach Consensus on Gross Tumor Volume (GTV) and Clinical Target Volume (CTV) on Computed Tomographic Images for Preoperative Radiotherapy of Primary Soft Tissue Sarcoma of Extremity in RTOG Studies

    PubMed Central

    Wang, Dian; Bosch, Walter; Roberge, David; Finkelstein, Steven E.; Petersen, Ivy; Haddock, Michael; Chen, Yen-Lin E.; Saito, Naoyuki G.; Kirsch, David G.; Hitchcock, Ying J.; Wolfson, Aaron H.; DeLaney, Thomas F.

    2011-01-01

    Objective To develop an Radiation Therapy Oncology Group (RTOG) atlas delineating gross tumor volume (GTV), and clinical target volume (CTV) to be used for preoperative radiotherapy of primary extremity soft tissue sarcoma (STS). Methods A consensus meeting was held during the RTOG meeting in January 2010 to reach agreement about GTV and CTV delineation on CT images for preoperative radiotherapy of high-grade large extremity STS. Data were presented to address the local extension of STS. Extensive discussion ensued to develop optimal criteria for GTV and CTV delineation on CT images. Results A consensus was reached on appropriate CT-based GTV and CTV. GTV is gross tumor defined by T1 contrast-enhanced MRI images. Fusion of MRI and CT is recommended to delineate the GTV. CTV for high-grade large STS typically includes GTV plus 3 cm margins in the longitudinal directions. If this causes the field to extend beyond the compartment, the field can be shortened to include the end of a compartment. The radial margin from the lesion should be 1.5 cm including any portion of the tumor not confined by an intact fascial barrier, bone or skin surface. Conclusion The consensus on GTV and CTV for preoperative radiotherapy of high-grade large extremity STS is available as web-based images as well as descriptive format through the RTOG. This is expected to improve target volume consistency and allow for rigorous evaluation of the benefits and risks of such treatment. PMID:21676552

  9. GMP cryopreservation of large volumes of cells for regenerative medicine: active control of the freezing process.

    PubMed

    Massie, Isobel; Selden, Clare; Hodgson, Humphrey; Fuller, Barry; Gibbons, Stephanie; Morris, G John

    2014-09-01

    Cryopreservation protocols are increasingly required in regenerative medicine applications but must deliver functional products at clinical scale and comply with Good Manufacturing Process (GMP). While GMP cryopreservation is achievable on a small scale using a Stirling cryocooler-based controlled rate freezer (CRF) (EF600), successful large-scale GMP cryopreservation is more challenging due to heat transfer issues and control of ice nucleation, both complex events that impact success. We have developed a large-scale cryocooler-based CRF (VIA Freeze) that can process larger volumes and have evaluated it using alginate-encapsulated liver cell (HepG2) spheroids (ELS). It is anticipated that ELS will comprise the cellular component of a bioartificial liver and will be required in volumes of ∼2 L for clinical use. Sample temperatures and Stirling cryocooler power consumption was recorded throughout cooling runs for both small (500 μL) and large (200 mL) volume samples. ELS recoveries were assessed using viability (FDA/PI staining with image analysis), cell number (nuclei count), and function (protein secretion), along with cryoscanning electron microscopy and freeze substitution techniques to identify possible injury mechanisms. Slow cooling profiles were successfully applied to samples in both the EF600 and the VIA Freeze, and a number of cooling and warming profiles were evaluated. An optimized cooling protocol with a nonlinear cooling profile from ice nucleation to -60°C was implemented in both the EF600 and VIA Freeze. In the VIA Freeze the nucleation of ice is detected by the control software, allowing both noninvasive detection of the nucleation event for quality control purposes and the potential to modify the cooling profile following ice nucleation in an active manner. When processing 200 mL of ELS in the VIA Freeze-viabilities at 93.4% ± 7.4%, viable cell numbers at 14.3 ± 1.7 million nuclei/mL alginate, and protein secretion at 10.5 ± 1.7

  10. Optimized algorithm module for large volume remote sensing image processing system

    NASA Astrophysics Data System (ADS)

    Jing, Changfeng; Liu, Nan; Liu, Renyi; Wang, Jiawen; Zhang, Qin

    2007-12-01

    A new remote sensing image processing system's algorithm module has been introduced in this paper, which is coded with Visual C++ 6.0 program language and can process large volume of remote sensing image. At the same time, adopted key technologies in algorithm module are given. Two defects of American remote sensing image processing system called ERDAS has been put forward in image filter algorithm and the storage of pixel values that are out of data type range. In author's system two optimized methods has been implemented in these two aspects. By contrasted with ERDAS IMAGINE System, the two methods had been proved to be effective in image analysis.

  11. Leak testing of cryogenically pumped large-volume high-vacuum systems

    NASA Astrophysics Data System (ADS)

    Sherlock, Charles N.

    1988-01-01

    The problems that may occur in the cryogenically pumped large-volume high-vacuum chambers (LVHVCs), used for the environmental testing of aerospace components and systems, are examined. Consideration is given to the designs of the LVHVCs and the cryogenic pumps. In the procedure of leak testing with tracer gas, the success of testing depends on attaining the required test sensitivity with speed, economy, and reliability. The steps required to speed up the leak location phase of the leak testing procedure and to thoroughly clean every penetration (i.e., fitting or nozzle) of the system are discussed.

  12. Large Volume, Optical and Opto-Mechanical Metrology Techniques for ISIM on JWST

    NASA Technical Reports Server (NTRS)

    Hadjimichael, Theo

    2015-01-01

    The final, flight build of the Integrated Science Instrument Module (ISIM) element of the James Webb Space Telescope is the culmination of years of work across many disciplines and partners. This paper covers the large volume, ambient, optical and opto-mechanical metrology techniques used to verify the mechanical integration of the flight instruments in ISIM, including optical pupil alignment. We present an overview of ISIM's integration and test program, which is in progress, with an emphasis on alignment and optical performance verification. This work is performed at NASA Goddard Space Flight Center, in close collaboration with the European Space Agency, the Canadian Space Agency, and the Mid-Infrared Instrument European Consortium.

  13. GMP Cryopreservation of Large Volumes of Cells for Regenerative Medicine: Active Control of the Freezing Process

    PubMed Central

    Massie, Isobel; Selden, Clare; Hodgson, Humphrey; Gibbons, Stephanie; Morris, G. John

    2014-01-01

    Cryopreservation protocols are increasingly required in regenerative medicine applications but must deliver functional products at clinical scale and comply with Good Manufacturing Process (GMP). While GMP cryopreservation is achievable on a small scale using a Stirling cryocooler-based controlled rate freezer (CRF) (EF600), successful large-scale GMP cryopreservation is more challenging due to heat transfer issues and control of ice nucleation, both complex events that impact success. We have developed a large-scale cryocooler-based CRF (VIA Freeze) that can process larger volumes and have evaluated it using alginate-encapsulated liver cell (HepG2) spheroids (ELS). It is anticipated that ELS will comprise the cellular component of a bioartificial liver and will be required in volumes of ∼2 L for clinical use. Sample temperatures and Stirling cryocooler power consumption was recorded throughout cooling runs for both small (500 μL) and large (200 mL) volume samples. ELS recoveries were assessed using viability (FDA/PI staining with image analysis), cell number (nuclei count), and function (protein secretion), along with cryoscanning electron microscopy and freeze substitution techniques to identify possible injury mechanisms. Slow cooling profiles were successfully applied to samples in both the EF600 and the VIA Freeze, and a number of cooling and warming profiles were evaluated. An optimized cooling protocol with a nonlinear cooling profile from ice nucleation to −60°C was implemented in both the EF600 and VIA Freeze. In the VIA Freeze the nucleation of ice is detected by the control software, allowing both noninvasive detection of the nucleation event for quality control purposes and the potential to modify the cooling profile following ice nucleation in an active manner. When processing 200 mL of ELS in the VIA Freeze—viabilities at 93.4%±7.4%, viable cell numbers at 14.3±1.7 million nuclei/mL alginate, and protein secretion at 10.5±1.7

  14. Cryogenic loading of large volume presses for high-pressure experimentation and synthesis of novel materials

    SciTech Connect

    Lipp, M J; Evans, W J; Yoo, C S

    2005-01-21

    We present an efficient easily implemented method for loading cryogenic fluids in a large volume press. We specifically apply this method to the high-pressure synthesis of an extended solid derived from CO using a Paris-Edinburgh cell. This method employs cryogenic cooling of Bridgman type WC anvils well insulated from other press components, condensation of the load gas within a brass annulus surrounding the gasket between the Bridgman anvils. We demonstrate the viability of the described approach by synthesizing macroscopic amounts (several milligrams) of polymeric CO-derived material, which were recovered to ambient conditions after compression of pure CO to 5 GPa or above.

  15. Large volume/high horsepower submersible pumping problems in water source wells

    SciTech Connect

    Hoestenbach, R.D.

    1981-01-01

    Various problems are encountered in, or compounded by, installing large volume/high horsepower submersible pumping equipment in water source wells, in the range of 30,000 to 90,000 bbl of water/day at 320 to 1020 hp. This study discusses the many problems that have appeared during the past 12 yr in Shell Oil Co's W. Texas water supply system and the solutions that were subsequently applied. The majority of these problems will be encountered in almost any project of this type. Specifically detailed are motor, pump, and protector anomalies, accessory equipment, surface production facilities, and the protective schemes utilized to optimize equipment life.

  16. Large-volume, high-horsepower submersible pumping problems in water source wells

    SciTech Connect

    Hoestenbach, R.D.

    1982-10-01

    Little has been written concerning problems that can be encountered in, or compounded by, installing large volume, high-horsepower submersible pumping equipment in water source wells in the range of 30,000 to 90,000 BWPD at 320 to 1,020 hp. This report addresses many problems of the past 12 years in Shell Oil Co.'s west Texas water supply system and the solutions that subsequently were applied. We feel that the majority of these problems are encountered in almost any project of this type. Motor, pump, and protector anomalies, accessory equipment, surface production facilities, and the protective schemes to optimize equipment life are discussed in detail.

  17. Thickness scalability of large volume cadmium zinc telluride high resolution radiation detectors

    NASA Astrophysics Data System (ADS)

    Awadalla, S. A.; Chen, H.; Mackenzie, J.; Lu, P.; Iniewski, K.; Marthandam, P.; Redden, R.; Bindley, G.; He, Z.; Zhang, F.

    2009-06-01

    This work focuses on the thickness scalability of traveling heater method (THM) grown CdZnTe crystals to produce large volume detectors with optimized spectroscopic performance. To meet this challenge, we have tuned both our THM growth process, to grow 75 mm diameter ingots, and our postgrowth annealing process. We have increased the thickness of our sliced wafers from 6 to 12 and 18 mm allowing the production of 10 and 15 mm thick detectors. As the detectors' thickness is scaled up, the energy resolution of both types, as pseudo-Frisch grid and pixelated monolithic detectors showed no degradation indicating improved materials uniformity and transport properties.

  18. A scale down process for the development of large volume cryopreservation.

    PubMed

    Kilbride, Peter; Morris, G John; Milne, Stuart; Fuller, Barry; Skepper, Jeremy; Selden, Clare

    2014-12-01

    The process of ice formation and propagation during cryopreservation impacts on the post-thaw outcome for a sample. Two processes, either network solidification or progressive solidification, can dominate the water-ice phase transition with network solidification typically present in small sample cryo-straws or cryo-vials. Progressive solidification is more often observed in larger volumes or environmental freezing. These different ice phase progressions could have a significant impact on cryopreservation in scale-up and larger volume cryo-banking protocols necessitating their study when considering cell therapy applications. This study determines the impact of these different processes on alginate encapsulated liver spheroids (ELS) as a model system during cryopreservation, and develops a method to replicate these differences in an economical manner. It was found in the current studies that progressive solidification resulted in fewer, but proportionally more viable cells 24h post-thaw compared with network solidification. The differences between the groups diminished at later time points post-thaw as cells recovered the ability to undertake cell division, with no statistically significant differences seen by either 48 h or 72 h in recovery cultures. Thus progressive solidification itself should not prove a significant hurdle in the search for successful cryopreservation in large volumes. However, some small but significant differences were noted in total viable cell recoveries and functional assessments between samples cooled with either progressive or network solidification, and these require further investigation. PMID:25219980

  19. A scale down process for the development of large volume cryopreservation☆

    PubMed Central

    Kilbride, Peter; Morris, G. John; Milne, Stuart; Fuller, Barry; Skepper, Jeremy; Selden, Clare

    2014-01-01

    The process of ice formation and propagation during cryopreservation impacts on the post-thaw outcome for a sample. Two processes, either network solidification or progressive solidification, can dominate the water–ice phase transition with network solidification typically present in small sample cryo-straws or cryo-vials. Progressive solidification is more often observed in larger volumes or environmental freezing. These different ice phase progressions could have a significant impact on cryopreservation in scale-up and larger volume cryo-banking protocols necessitating their study when considering cell therapy applications. This study determines the impact of these different processes on alginate encapsulated liver spheroids (ELS) as a model system during cryopreservation, and develops a method to replicate these differences in an economical manner. It was found in the current studies that progressive solidification resulted in fewer, but proportionally more viable cells 24 h post-thaw compared with network solidification. The differences between the groups diminished at later time points post-thaw as cells recovered the ability to undertake cell division, with no statistically significant differences seen by either 48 h or 72 h in recovery cultures. Thus progressive solidification itself should not prove a significant hurdle in the search for successful cryopreservation in large volumes. However, some small but significant differences were noted in total viable cell recoveries and functional assessments between samples cooled with either progressive or network solidification, and these require further investigation. PMID:25219980

  20. Comparing masked target transform volume (MTTV) clutter metric to human observer evaluation of visual clutter

    NASA Astrophysics Data System (ADS)

    Camp, H. A.; Moyer, Steven; Moore, Richard K.

    2010-04-01

    The Night Vision and Electronic Sensors Directorate's current time-limited search (TLS) model, which makes use of the targeting task performance (TTP) metric to describe image quality, does not explicitly account for the effects of visual clutter on observer performance. The TLS model is currently based on empirical fits to describe human performance for a time of day, spectrum and environment. Incorporating a clutter metric into the TLS model may reduce the number of these empirical fits needed. The masked target transform volume (MTTV) clutter metric has been previously presented and compared to other clutter metrics. Using real infrared imagery of rural images with varying levels of clutter, NVESD is currently evaluating the appropriateness of the MTTV metric. NVESD had twenty subject matter experts (SME) rank the amount of clutter in each scene in a series of pair-wise comparisons. MTTV metric values were calculated and then compared to the SME observers rankings. The MTTV metric ranked the clutter in a similar manner to the SME evaluation, suggesting that the MTTV metric may emulate SME response. This paper is a first step in quantifying clutter and measuring the agreement to subjective human evaluation.

  1. Impact of motion velocity on four-dimensional target volumes: a phantom study.

    PubMed

    Nakamura, Mitsuhiro; Narita, Yuichiro; Sawada, Akira; Matsugi, Kiyotomo; Nakata, Manabu; Matsuo, Yukinori; Mizowaki, Takashi; Hiraoka, Masahiro

    2009-05-01

    This study aims to assess the impact of motion velocity that may cause motion artifacts on target volumes (TVs) using a one-dimensional moving phantom. A 20 mm diameter spherical object embedded in a QUASAR phantom sinusoidally moved with approximately 5.0 or 10.0 mm amplitude (A) along the longitudinal axis of the computed tomography (CT) couch. The motion period was manually set in the range of 2.0-10.0 s at approximately 2.0 s interval. Four-dimensional (4D) CT images were acquired by a four-slice CT scanner (LightSpeed RT; General Electric Medical Systems, Waukesha, WI) with a slice thickness of 1.25 mm in axial cine mode. The minimum gantry rotation of 1.0 s was employed to achieve the maximum in-slice temporal resolution. Projection data over a full gantry rotation (1.0 s) were used for image reconstruction. Reflective marker position was recorded by the real-time positioning management system (Varian Medical Systems, Palo Alto, CA). ADVANTAGE 4D software exported ten respiratory phase volumes and the maximum intensity volume generated from all reconstructed data (MIV). The threshold to obtain static object volume (V0, 4.19 ml) was used to automatically segment TVs on CT images, and then the union of TVs on 4D CT images (TV(4D)) was constructed. TVs on MIV (TV(MIV)) were also segmented by the threshold that can determine the area occupied within the central slice of TV(MIV). The maximum motion velocity for each phase bin was calculated using the actual averaged motion period displayed on ADVANTAGE 4D software (T), the range of phases used to construct the target phase bin (phase range), and a mathematical model of sinusoidal function. Each volume size and the motion range of TV in the cranial-caudal (CC) direction were measured. Subsequently, cross-correlation coefficients between TV size and motion velocity as well as phase range were calculated. Both misalignment and motion-blurring artifacts were caused by high motion velocity, Less than 6% phase range was

  2. Radiotherapy planning for glioblastoma based on a tumor growth model: improving target volume delineation.

    PubMed

    Unkelbach, Jan; Menze, Bjoern H; Konukoglu, Ender; Dittmann, Florian; Le, Matthieu; Ayache, Nicholas; Shih, Helen A

    2014-02-01

    Glioblastoma differ from many other tumors in the sense that they grow infiltratively into the brain tissue instead of forming a solid tumor mass with a defined boundary. Only the part of the tumor with high tumor cell density can be localized through imaging directly. In contrast, brain tissue infiltrated by tumor cells at low density appears normal on current imaging modalities. In current clinical practice, a uniform margin, typically two centimeters, is applied to account for microscopic spread of disease that is not directly assessable through imaging. The current treatment planning procedure can potentially be improved by accounting for the anisotropy of tumor growth, which arises from different factors: anatomical barriers such as the falx cerebri represent boundaries for migrating tumor cells. In addition, tumor cells primarily spread in white matter and infiltrate gray matter at lower rate. We investigate the use of a phenomenological tumor growth model for treatment planning. The model is based on the Fisher-Kolmogorov equation, which formalizes these growth characteristics and estimates the spatial distribution of tumor cells in normal appearing regions of the brain. The target volume for radiotherapy planning can be defined as an isoline of the simulated tumor cell density. This paper analyzes the model with respect to implications for target volume definition and identifies its most critical components. A retrospective study involving ten glioblastoma patients treated at our institution has been performed. To illustrate the main findings of the study, a detailed case study is presented for a glioblastoma located close to the falx. In this situation, the falx represents a boundary for migrating tumor cells, whereas the corpus callosum provides a route for the tumor to spread to the contralateral hemisphere. We further discuss the sensitivity of the model with respect to the input parameters. Correct segmentation of the brain appears to be the most

  3. Radiotherapy planning for glioblastoma based on a tumor growth model: improving target volume delineation

    NASA Astrophysics Data System (ADS)

    Unkelbach, Jan; Menze, Bjoern H.; Konukoglu, Ender; Dittmann, Florian; Le, Matthieu; Ayache, Nicholas; Shih, Helen A.

    2014-02-01

    Glioblastoma differ from many other tumors in the sense that they grow infiltratively into the brain tissue instead of forming a solid tumor mass with a defined boundary. Only the part of the tumor with high tumor cell density can be localized through imaging directly. In contrast, brain tissue infiltrated by tumor cells at low density appears normal on current imaging modalities. In current clinical practice, a uniform margin, typically two centimeters, is applied to account for microscopic spread of disease that is not directly assessable through imaging. The current treatment planning procedure can potentially be improved by accounting for the anisotropy of tumor growth, which arises from different factors: anatomical barriers such as the falx cerebri represent boundaries for migrating tumor cells. In addition, tumor cells primarily spread in white matter and infiltrate gray matter at lower rate. We investigate the use of a phenomenological tumor growth model for treatment planning. The model is based on the Fisher-Kolmogorov equation, which formalizes these growth characteristics and estimates the spatial distribution of tumor cells in normal appearing regions of the brain. The target volume for radiotherapy planning can be defined as an isoline of the simulated tumor cell density. This paper analyzes the model with respect to implications for target volume definition and identifies its most critical components. A retrospective study involving ten glioblastoma patients treated at our institution has been performed. To illustrate the main findings of the study, a detailed case study is presented for a glioblastoma located close to the falx. In this situation, the falx represents a boundary for migrating tumor cells, whereas the corpus callosum provides a route for the tumor to spread to the contralateral hemisphere. We further discuss the sensitivity of the model with respect to the input parameters. Correct segmentation of the brain appears to be the most

  4. Enrichment of diluted cell populations from large sample volumes using 3D carbon-electrode dielectrophoresis.

    PubMed

    Islam, Monsur; Natu, Rucha; Larraga-Martinez, Maria Fernanda; Martinez-Duarte, Rodrigo

    2016-05-01

    Here, we report on an enrichment protocol using carbon electrode dielectrophoresis to isolate and purify a targeted cell population from sample volumes up to 4 ml. We aim at trapping, washing, and recovering an enriched cell fraction that will facilitate downstream analysis. We used an increasingly diluted sample of yeast, 10(6)-10(2) cells/ml, to demonstrate the isolation and enrichment of few cells at increasing flow rates. A maximum average enrichment of 154.2 ± 23.7 times was achieved when the sample flow rate was 10 μl/min and yeast cells were suspended in low electrically conductive media that maximizes dielectrophoresis trapping. A COMSOL Multiphysics model allowed for the comparison between experimental and simulation results. Discussion is conducted on the discrepancies between such results and how the model can be further improved. PMID:27375816

  5. First large volume characterization of the QIE10/11 custom front-end integrated circuits

    NASA Astrophysics Data System (ADS)

    Hare, D.; Baumbaugh, A.; Dal Monte, L.; Freeman, J.; Hirschauer, J.; Hughes, E.; Roy, T.; Whitbeck, A.; Yumiceva, F.; Zimmerman, T.

    2016-02-01

    The CMS experiment at the CERN Large Hadron Collider (LHC) will upgrade the photon detection and readout systems of its barrel and endcap hadron calorimeters (HCAL) through the second long shutdown of the LHC in 2018. A central feature of this upgrade is the development of two new versions of the QIE (Charge Integrator and Encoder), a Fermilab-designed custom ASIC for measurement of charge from detectors in high-rate environments. These most recent additions to the QIE family feature 17-bits of dynamic range with 1% digitization precision for high charge and a time-to-digital converter (TDC) with half nanosecond resolution all with 16 bits of readout per bunch crossing. For the first time, the CMS experiment has produced and characterized in great detail a large volume of chips. The characteristics and performance of the new QIE and their related chip-to-chip variations as measured in a sample of 10,000 chips is described.

  6. Hybrid Parallelism for Volume Rendering on Large, Multi-core Systems

    SciTech Connect

    Howison, Mark; Bethel, E. Wes; Childs, Hank

    2010-07-12

    This work studies the performance and scalability characteristics of"hybrid'"parallel programming and execution as applied to raycasting volume rendering -- a staple visualization algorithm -- on a large, multi-core platform. Historically, the Message Passing Interface (MPI) has become the de-facto standard for parallel programming and execution on modern parallel systems. As the computing industry trends towards multi-core processors, with four- and six-core chips common today and 128-core chips coming soon, we wish to better understand how algorithmic and parallel programming choices impact performance and scalability on large, distributed-memory multi-core systems. Our findings indicate that the hybrid-parallel implementation, at levels of concurrency ranging from 1,728 to 216,000, performs better, uses a smaller absolute memory footprint, and consumes less communication bandwidth than the traditional, MPI-only implementation.

  7. Hybrid Parallelism for Volume Rendering on Large, Multi-core Systems

    SciTech Connect

    Howison, Mark; Bethel, E. Wes; Childs, Hank

    2010-06-14

    This work studies the performance and scalability characteristics of"hybrid" parallel programming and execution as applied to raycasting volume rendering -- a staple visualization algorithm -- on a large, multi-core platform. Historically, the Message Passing Interface (MPI) has become the de-facto standard for parallel programming and execution on modern parallel systems. As the computing industry trends towards multi-core processors, with four- and six-core chips common today and 128-core chips coming soon, we wish to better understand how algorithmic and parallel programming choices impact performance and scalability on large, distributed-memory multi-core systems. Our findings indicate that the hybrid-parallel implementation, at levels of concurrency ranging from 1,728 to 216,000, performs better, uses a smaller absolute memory footprint, and consumes less communication bandwidth than the traditional, MPI-only implementation.

  8. MPI-hybrid Parallelism for Volume Rendering on Large, Multi-core Systems

    SciTech Connect

    Howison, Mark; Bethel, E. Wes; Childs, Hank

    2010-03-20

    This work studies the performance and scalability characteristics of"hybrid'" parallel programming and execution as applied to raycasting volume rendering -- a staple visualization algorithm -- on a large, multi-core platform. Historically, the Message Passing Interface (MPI) has become the de-facto standard for parallel programming and execution on modern parallel systems. As the computing industry trends towards multi-core processors, with four- and six-core chips common today and 128-core chips coming soon, we wish to better understand how algorithmic and parallel programming choices impact performance and scalability on large, distributed-memory multi-core systems. Our findings indicate that the hybrid-parallel implementation, at levels of concurrency ranging from 1,728 to 216,000, performs better, uses a smaller absolute memory footprint, and consumes less communication bandwidth than the traditional, MPI-only implementation.

  9. Hybrid Parallelism for Volume Rendering on Large, Multi- and Many-core Systems

    SciTech Connect

    Howison, Mark; Bethel, E. Wes; Childs, Hank

    2011-01-01

    With the computing industry trending towards multi- and many-core processors, we study how a standard visualization algorithm, ray-casting volume rendering, can benefit from a hybrid parallelism approach. Hybrid parallelism provides the best of both worlds: using distributed-memory parallelism across a large numbers of nodes increases available FLOPs and memory, while exploiting shared-memory parallelism among the cores within each node ensures that each node performs its portion of the larger calculation as efficiently as possible. We demonstrate results from weak and strong scaling studies, at levels of concurrency ranging up to 216,000, and with datasets as large as 12.2 trillion cells. The greatest benefit from hybrid parallelism lies in the communication portion of the algorithm, the dominant cost at higher levels of concurrency. We show that reducing the number of participants with a hybrid approach significantly improves performance.

  10. Points based reconstruction and rendering of 3D shapes from large volume dataset

    NASA Astrophysics Data System (ADS)

    Zhao, Mingchang; Tian, Jie; He, Huiguang; Li, Guangming

    2003-05-01

    In the field of medical imaging, researchers often need visualize lots of 3D datasets to get the informaiton contained in these datasets. But the huge data genreated by modern medical imaging device challenge the real time processing and rendering algorithms at all the time. Spurring by the great achievement of Points Based Rendering (PBR) in the fields of computer graphics to render very large meshes, we propose a new algorithm to use the points as basic primitive of surface reconstruction and rendering to interactively reconstruct and render very large volume dataset. By utilizing the special characteristics of medical image datasets, we obtain a fast and efficient points-based reconstruction and rendering algorithm in common PC. The experimental results show taht this algorithm is feasible and efficient.

  11. Multiple distal basin plains reveal a common distribution for large volume turbidity current recurrence intervals

    NASA Astrophysics Data System (ADS)

    Clare, M. A.; Talling, P. J.; Hunt, J.; Challenor, P. G.

    2013-12-01

    Remarkably large volume (>>1 km3) deposits emplaced by turbidity currents in distal basin plains result from large submarine landslides. Such landslides may generate tsunamis, and the turbidity currents pose threats to seafloor structures as well as being one of the most important processes for sediment transport across our planet. It is therefore important to understand the recurrence intervals and timing of landslides and the turbidity currents they generate. An understanding of their frequency provides information to assist in forward-looking geohazard analyses, including probabilistic modelling of potential damage. Analysis of their frequency distribution may also help to unravel links to triggering and conditioning mechanisms. We present long term records (up to 17 Ma) of landslide-triggered turbidity current recurrence intervals. We document the distribution of recurrence intervals for large volume turbidites in four basin-plains in disparate locations worldwide, including two recent systems and two outcrop studies. The recurrence times of turbidity currents is inferred from intervals of hemipelagic mud that form by fallout of background sediment between turbidity currents, and the average accumulation rate of hemipelagic mud between dated horizons. There is very little erosion below turbidite beds in the study locations; hence they represent an almost continuous sedimentary record. This method has the advantage of providing information on the timing of many different events from a small number of cores, with such large numbers (N> 100) of beds needed for robust statistical analysis. A common frequency distribution of turbidite recurrence intervals is observed, despite their variable ages and disparate locations, suggesting similar underlying controls on triggering mechanism and frequency. This common distribution closely approximates a temporally-random Poisson distribution, such that the probability of an event occurring along the basin margin is

  12. Volume Transmission in Central Dopamine and Noradrenaline Neurons and Its Astroglial Targets.

    PubMed

    Fuxe, Kjell; Agnati, Luigi F; Marcoli, Manuela; Borroto-Escuela, Dasiel O

    2015-12-01

    Already in the 1960s the architecture and pharmacology of the brainstem dopamine (DA) and noradrenaline (NA) neurons with formation of vast numbers of DA and NA terminal plexa of the central nervous system (CNS) indicated that they may not only communicate via synaptic transmission. In the 1980s the theory of volume transmission (VT) was introduced as a major communication together with synaptic transmission in the CNS. VT is an extracellular and cerebrospinal fluid transmission of chemical signals like transmitters, modulators etc. moving along energy gradients making diffusion and flow of VT signals possible. VT interacts with synaptic transmission mainly through direct receptor-receptor interactions in synaptic and extrasynaptic heteroreceptor complexes and their signaling cascades. The DA and NA neurons are specialized for extrasynaptic VT at the soma-dendrtitic and terminal level. The catecholamines released target multiple DA and adrenergic subtypes on nerve cells, astroglia and microglia which are the major cell components of the trophic units building up the neural-glial networks of the CNS. DA and NA VT can modulate not only the strength of synaptic transmission but also the VT signaling of the astroglia and microglia of high relevance for neuron-glia interactions. The catecholamine VT targeting astroglia can modulate the fundamental functions of astroglia observed in neuroenergetics, in the Glymphatic system, in the central renin-angiotensin system and in the production of long-distance calcium waves. Also the astrocytic and microglial DA and adrenergic receptor subtypes mediating DA and NA VT can be significant drug targets in neurological and psychiatric disease. PMID:25894681

  13. Pathways of deep cyclones associated with large volume changes (LVCs) and major Baltic inflows (MBIs)

    NASA Astrophysics Data System (ADS)

    Lehmann, Andreas; Höflich, Katharina; Post, Piia; Myrberg, Kai

    2016-04-01

    Large volume changes (LVCs) and major Baltic inflows (MBIs) are essential processes for the water exchange and renewal of the deep stagnant deep water in the Baltic Sea deep basins. MBIs are considered as subset of LVCs transporting with the large water volume a big amount of highly saline and oxygenated water into the Baltic Sea. Since the early 1980s the frequency of MBIs has dropped drastically from 5 to 7 events to only one inflow per decade, and long lasting periods without MBIs became the usual state. Only in January 1993, 2003 and December 2014 MBIs occurred that were able to interrupt the stagnation periods in the deep basins of the Baltic Sea. However, in spite of the decreasing frequency of MBIs, there is no obvious decrease of LVCs. Large volume changes have been calculated for the period 1887-2014 filtering daily time series of Landsort sea surface elevation anomalies. The Landsort sea level is known to reflect the mean sea level of the Baltic Sea very well. Thus, LVCs can be calculated from the mean sea level variations. The cases with local minimum and maximum difference resulting of at least 100 km³ of water volume change have been chosen for a closer study of characteristic pathways of deep cyclones. The average duration of a LVC is about 40 days. During this time, 5-6 deep cyclones will move along characteristic storm tracks. We obtained three main routes of deep cyclones which were associated with LVCs, but also with the climatology. One is approaching from the west at about 58-62°N, passing the northern North Sea, Oslo, Sweden and the Island of Gotland, while a second, less frequent one, is approaching from the west at about 65°N, crossing Scandinavia south-eastwards passing the Sea of Bothnia and entering Finland. A third very frequent one is entering the study area north of Scotland turning north-eastwards along the northern coast of Scandinavia. Thus, the conditions for a LVC to happen are a temporal clustering of deep cyclones in certain

  14. Mechanically Cooled Large-Volume Germanium Detector Systems for Nuclear Explosion Monitoring

    SciTech Connect

    Hull, Ethan L.; Pehl, Richard H.; Lathrop, James R.; Martin, Gregory N.; Mashburn, R. B.; Miley, Harry S.; Aalseth, Craig E.; Hossbach, Todd W.; Bowyer, Ted W.

    2006-09-21

    Compact maintenance free mechanical cooling systems are being developed to operate large volume (~570 cm3, ~3 kg, 140% or larger) germanium detectors for field applications. We are using a new generation of Stirling-cycle mechanical coolers for operating the very largest volume germanium detectors with absolutely no maintenance or liquid nitrogen requirements. The user will be able to leave these systems unplugged on the shelf until needed. The flip of a switch will bring a system to life in ~1 hour for measurements. The maintenance-free operating lifetime of these detector systems will exceed five years. These features are necessary for remote long-duration liquid-nitrogen free deployment of large-volume germanium gamma-ray detector systems for Nuclear Explosion Monitoring (NEM). The Radionuclide Aerosol Sampler/Analyzer (RASA) will greatly benefit from the availability of such detectors by eliminating the need for liquid nitrogen at RASA sites while still allowing the very largest available germanium detectors to be utilized. These mechanically cooled germanium detector systems being developed here will provide the largest, most sensitive detectors possible for use with the RASA. To provide such systems, the appropriate technical fundamentals are being researched. Mechanical cooling of germanium detectors has historically been a difficult endeavor. The success or failure of mechanically cooled germanium detectors stems from three main technical issues: temperature, vacuum, and vibration. These factors affect one another. There is a particularly crucial relationship between vacuum and temperature. These factors will be experimentally studied both separately and together to insure a solid understanding of the physical limitations each factor places on a practical mechanically cooled germanium detector system for field use. Using this knowledge, a series of mechanically cooled germanium detector prototype systems are being designed and fabricated. Our collaborators

  15. Large-volume flux closure during plasmoid-mediated reconnection in coaxial helicity injection

    DOE PAGESBeta

    Ebrahimi, F.; Raman, R.

    2016-03-23

    A large-volume flux closure during transient coaxial helicity injection (CHI) in NSTX-U is demonstrated through resistive magnetohydrodynamics (MHD) simulations. Several major improvements, including the improved positioning of the divertor poloidal field coils, are projected to improve the CHI start-up phase in NSTX-U. Simulations in the NSTX-U configuration with constant in time coil currents show that with strong flux shaping the injected open field lines (injector flux) rapidly reconnect and form large volume of closed flux surfaces. This is achieved by driving parallel current in the injector flux coil and oppositely directed currents in the flux shaping coils to form amore » narrow injector flux footprint and push the injector flux into the vessel. As the helicity and plasma are injected into the device, the oppositely directed field lines in the injector region are forced to reconnect through a local Sweet-Parker type reconnection, or to spontaneously reconnect when the elongated current sheet becomes MHD unstable to form plasmoids. In these simulations for the first time, it is found that the closed flux is over 70% of the initial injector flux used to initiate the discharge. Furthermore, these results could work well for the application of transient CHI in devices that employ super conducting coils to generate and sustain the plasma equilibrium.« less

  16. Large-volume sample stacking for analysis of ethylenediaminetetraacetic acid by capillary electrophoresis.

    PubMed

    Zhu, Zhiwei; Zhang, Lifeng; Marimuthu, Arun; Yang, Zhaoguang

    2002-09-01

    A simple, quick, and sensitive capillary electrophoretic technique-large volume stacking using the electroosmotic flow (EOF) pump (LVSEP) - has been developed for determining ethylenediaminetetraacetic acid (EDTA) in drinking water for the first time. It is based on a precapillary complexation of EDTA with Fe(III) ions, followed by large-volume sample stacking and direct UV detection at 258 nm. The curve of peak response versus concentration was linear from 5.0 to 600.0 microg/L, and 0.7 to 30.0 mg/L. The regression coefficients were 0.9988 and 0.9990, respectively. The detection limit of the current technique for EDTA analysis was 0.2 microg/L with an additional 10-fold preconcentration procedure, based on the signal-to-noise ratio of 3. As opposed to the classical capillary zone electrophoresis (CE) method, the detection limit was improved about 1000-fold by using this LVSEP method. To the best of our knowledge, it represents the highest sensitivity for EDTA analysis via CE. Several drinking water samples were tested by this novel method with satisfactory results. PMID:12207295

  17. Controlled ice nucleation--Is it really needed for large-volume sperm cryopreservation?

    PubMed

    Saragusty, Joseph; Osmers, Jan-Hendrik; Hildebrandt, Thomas Bernd

    2016-04-15

    Controlled ice nucleation (CIN) is an integral stage of slow freezing process when relatively large volumes (usually 1 mL or larger) of biological samples in suspension are involved. Without it, a sample will supercool to way below its melting point before ice crystals start forming, resulting in multiple damaging processes. In this study, we tested the hypothesis that when freezing large volumes by the directional freezing technique, a CIN stage is not needed. Semen samples collected from ten bulls were frozen in 2.5-mL HollowTubes in a split-sample manner with and without a CIN stage. Thawed samples were evaluated for viability, acrosome integrity, rate of normal morphology, and, using computer-aided sperm analysis system, for a wide range of motility parameters that were also evaluated after 3 hours of incubation at 37 °C. Analysis of the results found no difference between freezing with and without CIN stage in any and all of the 29 parameters compared (P > 0.1 for all). This similarity was maintained through 3 hours of incubation at 37 °C. Possibly, because of its structure, the directional freezing device promotes continuous ice nucleation so a specific CIN stage is no longer needed, thus reducing costs, energy use, and carbon footprint. PMID:26806291

  18. Broadband frequency ECR ion source concepts with large resonant plasma volumes

    SciTech Connect

    Alton, G.D.

    1995-12-31

    New techniques are proposed for enhancing the performances of ECR ion sources. The techniques are based on the use of high-power, variable-frequency, multiple-discrete-frequency, or broadband microwave radiation, derived from standard TWT technology, to effect large resonant ``volume`` ECR sources. The creation of a large ECR plasma ``volume`` permits coupling of more power into the plasma, resulting in the heating of a much larger electron population to higher energies, the effect of which is to produce higher charge state distributions and much higher intensities within a particular charge state than possible in present forms of the ECR ion source. If successful, these developments could significantly impact future accelerator designs and accelerator-based, heavy-ion-research programs by providing multiply-charged ion beams with the energies and intensities required for nuclear physics research from existing ECR ion sources. The methods described in this article can be used to retrofit any ECR ion source predicated on B-minimum plasma confinement techniques.

  19. Generation of Diffuse Large Volume Plasma by an Ionization Wave from a Plasma Jet

    NASA Astrophysics Data System (ADS)

    Laroussi, Mounir; Razavi, Hamid

    2015-09-01

    Low temperature plasma jets emitted in ambient air are the product of fast ionization waves that are guided within a channel of a gas flow, such as helium. This guided ionization wave can be transmitted through a dielectric material and under some conditions can ignite a discharge behind the dielectric material. Here we present a novel way to produce large volume diffuse low pressure plasma inside a Pyrex chamber that does not have any electrodes or electrical energy directly applied to it. The diffuse plasma is ignited inside the chamber by a plasma jet located externally to the chamber and that is physically and electrically unconnected to the chamber. Instead, the plasma jet is just brought in close proximity to the external wall/surface of the chamber or to a dielectric tubing connected to the chamber. The plasma thus generated is diffuse, large volume and with physical and chemical characteristics that are different than the external plasma jet that ignited it. So by using a plasma jet we are able to ``remotely'' ignite volumetric plasma under controlled conditions. This novel method of ``remote'' generation of a low pressure, low temperature diffuse plasma can be useful for various applications including material processing and biomedicine.

  20. Colloids Versus Albumin in Large Volume Paracentesis to Prevent Circulatory Dysfunction: Evidence-based Case Report.

    PubMed

    Widjaja, Felix F; Khairan, Paramita; Kamelia, Telly; Hasan, Irsan

    2016-04-01

    Large volume paracentesis may cause paracentesis induced circulatory dysfunction (PICD). Albumin is recommended to prevent this abnormality. Meanwhile, the price of albumin is too expensive and there should be another alternative that may prevent PICD. This report aimed to compare albumin to colloids in preventing PICD. Search strategy was done using PubMed, Scopus, Proquest, dan Academic Health Complete from EBSCO with keywords of "ascites", "albumin", "colloid", "dextran", "hydroxyethyl starch", "gelatin", and "paracentesis induced circulatory dysfunction". Articles was limited to randomized clinical trial and meta-analysis with clinical question of "In hepatic cirrhotic patient undergone large volume paracentesis, whether colloids were similar to albumin to prevent PICD". We found one meta-analysis and four randomized clinical trials (RCT). A meta analysis showed that albumin was still superior of which odds ratio 0.34 (0.23-0.51). Three RCTs showed the same results and one RCT showed albumin was not superior than colloids. We conclude that colloids could not constitute albumin to prevent PICD, but colloids still have a role in patient who undergone paracentesis less than five liters. PMID:27550886

  1. Large-volume flux closure during plasmoid-mediated reconnection in coaxial helicity injection

    NASA Astrophysics Data System (ADS)

    Ebrahimi, F.; Raman, R.

    2016-04-01

    A large-volume flux closure during transient coaxial helicity injection (CHI) in NSTX-U is demonstrated through resistive magnetohydrodynamics (MHD) simulations. Several major improvements, including the improved positioning of the divertor poloidal field coils, are projected to improve the CHI start-up phase in NSTX-U. Simulations in the NSTX-U configuration with constant in time coil currents show that with strong flux shaping the injected open field lines (injector flux) rapidly reconnect and form large volume of closed flux surfaces. This is achieved by driving parallel current in the injector flux coil and oppositely directed currents in the flux shaping coils to form a narrow injector flux footprint and push the injector flux into the vessel. As the helicity and plasma are injected into the device, the oppositely directed field lines in the injector region are forced to reconnect through a local Sweet-Parker type reconnection, or to spontaneously reconnect when the elongated current sheet becomes MHD unstable to form plasmoids. In these simulations for the first time, it is found that the closed flux is over 70% of the initial injector flux used to initiate the discharge. These results could work well for the application of transient CHI in devices that employ super conducting coils to generate and sustain the plasma equilibrium.

  2. Development of large volume double ring penning plasma discharge source for efficient light emissions

    SciTech Connect

    Prakash, Ram; Vyas, Gheesa Lal; Jain, Jalaj; Prajapati, Jitendra; Pal, Udit Narayan; Chowdhuri, Malay Bikas; Manchanda, Ranjana

    2012-12-15

    In this paper, the development of large volume double ring Penning plasma discharge source for efficient light emissions is reported. The developed Penning discharge source consists of two cylindrical end cathodes of stainless steel having radius 6 cm and a gap 5.5 cm between them, which are fitted in the top and bottom flanges of the vacuum chamber. Two stainless steel anode rings with thickness 0.4 cm and inner diameters 6.45 cm having separation 2 cm are kept at the discharge centre. Neodymium (Nd{sub 2}Fe{sub 14}B) permanent magnets are physically inserted behind the cathodes for producing nearly uniform magnetic field of {approx}0.1 T at the center. Experiments and simulations have been performed for single and double anode ring configurations using helium gas discharge, which infer that double ring configuration gives better light emissions in the large volume Penning plasma discharge arrangement. The optical emission spectroscopy measurements are used to complement the observations. The spectral line-ratio technique is utilized to determine the electron plasma density. The estimated electron plasma density in double ring plasma configuration is {approx}2 Multiplication-Sign 10{sup 11} cm{sup -3}, which is around one order of magnitude larger than that of single ring arrangement.

  3. Diethylaminoethyl-cellulose clean-up of a large volume naphthenic acid extract.

    PubMed

    Frank, Richard A; Kavanagh, Richard; Burnison, B Kent; Headley, John V; Peru, Kerry M; Der Kraak, Glen Van; Solomon, Keith R

    2006-08-01

    The Athabasca oil sands of Alberta, Canada contain an estimated 174 billion barrels of bitumen. During oil sands refining processes, an extraction tailings mixture is produced that has been reported as toxic to aquatic organisms and is therefore collected in settling ponds on site. Investigation into the toxicity of these tailings pond waters has identified naphthenic acids (NAs) and their sodium salts as the major toxic components, and a multi-year study has been initiated to identify the principal toxic components within NA mixtures. Future toxicity studies require a large volume of a NA mixture, however, a well-defined bulk extraction technique is not available. This study investigated the use of a weak anion exchanger, diethylaminoethyl-cellulose (DEAE-cellulose), to remove humic-like material present after collecting the organic acid fraction of oil sands tailings pond water. The NA extraction and clean-up procedure proved to be a fast and efficient method to process large volumes of tailings pond water, providing an extraction efficiency of 41.2%. The resulting concentrated NA solution had a composition that differed somewhat from oil sands fresh tailings, with a reduction in the abundance of lower molecular weight NAs being the most significant difference. This reduction was mainly due to the initial acidification of tailings pond water. The DEAE-cellulose treatment had only a minor effect on the NA concentration, no noticeable effect on the NA fingerprint, and no significant effect on the mixture toxicity towards Vibrio fischeri. PMID:16469358

  4. Targeted Tandem Duplication of a Large Chromosomal Segment in Aspergillus oryzae

    PubMed Central

    Sato, Atsushi; Ogawa, Masahiro; Hanya, Yoshiki; Oguma, Tetsuya

    2014-01-01

    We describe here the first successful construction of a targeted tandem duplication of a large chromosomal segment in Aspergillus oryzae. The targeted tandem chromosomal duplication was achieved by using strains that had a 5′-deleted pyrG upstream of the region targeted for tandem chromosomal duplication and a 3′-deleted pyrG downstream of the target region. Consequently, strains bearing a 210-kb targeted tandem chromosomal duplication near the centromeric region of chromosome 8 and strains bearing a targeted tandem chromosomal duplication of a 700-kb region of chromosome 2 were successfully constructed. The strains bearing the tandem chromosomal duplication were efficiently obtained from the regenerated protoplast of the parental strains. However, the generation of the chromosomal duplication did not depend on the introduction of double-stranded breaks (DSBs) by I-SceI. The chromosomal duplications of these strains were stably maintained after five generations of culture under nonselective conditions. The strains bearing the tandem chromosomal duplication in the 700-kb region of chromosome 2 showed highly increased protease activity in solid-state culture, indicating that the duplication of large chromosomal segments could be a useful new breeding technology and gene analysis method. PMID:24837372

  5. Integrating respiratory-gated PET-based target volume delineation in liver SBRT planning, a pilot study

    PubMed Central

    2014-01-01

    Background To assess the feasibility and benefit of integrating four-dimensional (4D) Positron Emission Tomography (PET) – computed tomography (CT) for liver stereotactic body radiation therapy (SBRT) planning. Methods 8 patients with 14 metastases were accrued in the study. They all underwent a non-gated PET and a 4D PET centered on the liver. The same CT scan was used for attenuation correction, registration, and considered the planning CT for SBRT planning. Six PET phases were reconstructed for each 4D PET. By applying an individualized threshold to the 4D PET, a Biological Internal Target Volume (BITV) was generated for each lesion. A gated Planning Target Volume (PTVg) was created by adding 3 mm to account for set-up margins. This volume was compared to a manual Planning Target Volume (PTV) delineated with the help of a semi-automatic Biological Target Volume (BTV) obtained from the non-gated exam. A 5 mm radial and a 10 mm craniocaudal margins were applied to account for tumor motion and set-up margins to create the PTV. Results One undiagnosed liver metastasis was discovered thanks to the 4D PET. The semi-automatic BTV were significantly smaller than the BITV (p = 0.0031). However, after applying adapted margins, 4D PET allowed a statistically significant decrease in the PTVg as compared to the PTV (p = 0.0052). Conclusions In comparison to non-gated PET, 4D PET may better define the respiratory movements of liver targets and improve SBRT planning for liver metastases. Furthermore, non respiratory-gated PET exams can both misdiagnose liver metastases and underestimate the real internal target volumes. PMID:24885897

  6. Large volume susy breaking with a solution to the decompactification problem

    NASA Astrophysics Data System (ADS)

    Faraggi, Alon E.; Kounnas, Costas; Partouche, Hervé

    2015-10-01

    We study heterotic ground states in which supersymmetry is broken by coupling the momentum and winding charges of two large extra dimensions to the R-charges of the supersymmetry generators. The large dimensions give rise to towers of heavy string thresholds that contribute to the running of the gauge couplings. In the general case, these contributions are proportional to the volume of the two large dimensions and invalidate the perturbative string expansion. The problem is evaded if the susy breaking sectors arise as a spontaneously broken phase of N = 4 → N = 2 → N = 0 supersymmetry, provided that N = 4 supersymmetry is restored on the boundary of the moduli space. We discuss the mechanism in the case of Z2 ×Z2 orbifolds, which requires that the twisted sector that contains the large extra dimensions has no fixed points. We analyze the full string partition function and show that the twisted sectors distribute themselves in non-aligned N = 2 orbits, hence preserving the solution to the string decompactification problem. Remarkably, we find that the contribution to the vacuum energy from the N = 2 → N = 0 sectors is suppressed, and the only substantial contribution arises from the breaking of the N = 4 sector to N = 0.

  7. The Oligocene Lund Tuff, Great Basin, USA: a very large volume monotonous intermediate

    NASA Astrophysics Data System (ADS)

    Maughan, Larissa L.; Christiansen, Eric H.; Best, Myron G.; Grommé, C. Sherman; Deino, Alan L.; Tingey, David G.

    2002-03-01

    Unusual monotonous intermediate ignimbrites consist of phenocryst-rich dacite that occurs as very large volume (>1000 km 3) deposits that lack systematic compositional zonation, comagmatic rhyolite precursors, and underlying plinian beds. They are distinct from countless, usually smaller volume, zoned rhyolite-dacite-andesite deposits that are conventionally believed to have erupted from magma chambers in which thermal and compositional gradients were established because of sidewall crystallization and associated convective fractionation. Despite their great volume, or because of it, monotonous intermediates have received little attention. Documentation of the stratigraphy, composition, and geologic setting of the Lund Tuff - one of four monotonous intermediate tuffs in the middle-Tertiary Great Basin ignimbrite province - provides insight into its unusual origin and, by implication, the origin of other similar monotonous intermediates. The Lund Tuff is a single cooling unit with normal magnetic polarity whose volume likely exceeded 3000 km 3. It was emplaced 29.02±0.04 Ma in and around the coeval White Rock caldera which has an unextended north-south diameter of about 50 km. The tuff is monotonous in that its phenocryst assemblage is virtually uniform throughout the deposit: plagioclase>quartz≈hornblende>biotite>Fe-Ti oxides≈sanidine>titanite, zircon, and apatite. However, ratios of phenocrysts vary by as much as an order of magnitude in a manner consistent with progressive crystallization in the pre-eruption chamber. A significant range in whole-rock chemical composition (e.g., 63-71 wt% SiO 2) is poorly correlated with phenocryst abundance. These compositional attributes cannot have been caused wholly by winnowing of glass from phenocrysts during eruption, as has been suggested for the monotonous intermediate Fish Canyon Tuff. Pumice fragments are also crystal-rich, and chemically and mineralogically indistinguishable from bulk tuff. We postulate that

  8. Impact Factors for Microinvasion in Intrahepatic Cholangiocarcinoma: A Possible System for Defining Clinical Target Volume

    SciTech Connect

    Bi Aihong; Zeng Zhaochong; Ji Yuan; Zeng Haiying; Xu Chen; Tang Zhaoyou; Fan Jia; Zhou Jian; Zeng Mengsu; Tan Yunshan

    2010-12-01

    Purpose: To quantify microscopic invasion of intrahepatic cholangiocarcinoma (IHC) into nontumor tissue and define the gross tumor volume (GTV)-to-clinical target volume (CTV) expansion necessary for radiotherapy. Methods and Materials: One-hundred IHC patients undergoing radical resection from January 2004 to July 2008 were enrolled in this study. Pathologic and clinical data including maximum tumor diameter, tumor boundary type, TNM stage, histologic grade, tumor markers, and liver enzymes were reviewed. The distance of microinvasion from the tumor boundary was measured by microscopy. The contraction coefficient for tumor measurements in radiographs and slide-mounted tissue was calculated. SPSS15.0 was used for statistical analysis. Results: Sixty-five patients (65%) exhibited tumor microinvasions. Microinvasions ranged from 0.4-8 mm, with 96% of patients having a microinvasion distance {<=}6 mm measured on slide. The radiograph-to-slide contraction coefficient was 82.1%. The degree of microinvasion was correlated with tumor boundary type, TNM stage, histologic grade, and serum levels of carbohydrate antigen 19-9, alanine aminotransferase, aspartate aminotransferase, {gamma}-glutamyltransferase and alkaline phosphatase. To define CTV accurately, we devised a scoring system based on combination of these factors. According to this system, a score {<=}1.5 is associated with 96.1% sensitivity in detecting patients with a microextension {<=}4.9 mm in radiographs, whereas a score {>=}2 has a 95.1% sensitivity in detecting microextension {<=}7.9 mm measured on radiograph. Conclusions: Patients with a score {<=}1.5 and {>=}2 require a radiographic GTV-to-CTV expansions of 4.9 and 7.9 mm, respectively, to encompass >95% of microinvasions.

  9. Anatomic Boundaries of the Clinical Target Volume (Prostate Bed) After Radical Prostatectomy

    SciTech Connect

    Wiltshire, Kirsty L.; Brock, Kristy K.; Haider, Masoom A.; Zwahlen, Daniel; Kong, Vickie; Chan, Elisa; Moseley, Joanne; Bayley, Andrew; Catton, Charles; Chung, Peter W.M.; Gospodarowicz, Mary; Milosevic, Michael; Kneebone, Andrew; Warde, Padraig; Menard, Cynthia

    2007-11-15

    Purpose: We sought to derive and validate an interdisciplinary consensus definition for the anatomic boundaries of the postoperative clinical target volume (CTV, prostate bed). Methods and Materials: Thirty one patients who had planned for radiotherapy after radical prostatectomy were enrolled and underwent computed tomography and magnetic resonance imaging (MRI) simulation prior to radiotherapy. Through an iterative process of consultation and discussion, an interdisciplinary consensus definition was derived based on a review of published data, patterns of local failure, surgical practice, and radiologic anatomy. In validation, we analyzed the distribution of surgical clips in reference to the consensus CTV and measured spatial uncertainties in delineating the CTV and vesicourethral anastomosis. Clinical radiotherapy plans were retrospectively evaluated against the consensus CTV (prostate bed). Results: Anatomic boundaries of the consensus CTV (prostate bed) are described. Surgical clips (n = 339) were well distributed throughout the CTV. The vesicourethral anastomosis was accurately localized using central sagittal computed tomography reconstruction, with a mean {+-} standard deviation uncertainty of 1.8 {+-} 2.5 mm. Delineation uncertainties were small for both MRI and computed tomography (mean reproducibility, 0-3.8 mm; standard deviation, 1.0-2.3); they were most pronounced in the anteroposterior and superoinferior dimensions and at the superior/posterior-most aspect of the CTV. Retrospectively, the mean {+-} standard deviation CTV (prostate bed) percentage of volume receiving 100% of prescribed dose was only 77% {+-} 26%. Conclusions: We propose anatomic boundaries for the CTV (prostate bed) and present evidence supporting its validity. In the absence of gross recurrence, the role of MRI in delineating the CTV remains to be confirmed. The CTV is larger than historically practiced at our institution and should be encompassed by a microscopic tumoricidal dose.

  10. Large volume recycling of oceanic lithosphere over short time scales: geochemical constraints from the Caribbean Large Igneous Province

    NASA Astrophysics Data System (ADS)

    Hauff, F.; Hoernle, K.; Tilton, G.; Graham, D. W.; Kerr, A. C.

    2000-01-01

    isochron diagrams suggests that the age of separation of enriched and depleted components from the depleted MORB source mantle could have been ≤500 Ma before CLIP formation and interpreted to reflect the recycling time of the CLIP source. Mantle plume heads may provide a mechanism for transporting large volumes of possibly young recycled oceanic lithosphere residing in the lower mantle back into the shallow MORB source mantle.

  11. Calcium Isolation from Large-Volume Human Urine Samples for 41Ca Analysis by Accelerator Mass Spectrometry

    PubMed Central

    Miller, James J; Hui, Susanta K; Jackson, George S; Clark, Sara P; Einstein, Jane; Weaver, Connie M; Bhattacharyya, Maryka H

    2013-01-01

    Calcium oxalate precipitation is the first step in preparation of biological samples for 41Ca analysis by accelerator mass spectrometry. A simplified protocol for large-volume human urine samples was characterized, with statistically significant increases in ion current and decreases in interference. This large-volume assay minimizes cost and effort and maximizes time after 41Ca administration during which human samples, collected over a lifetime, provide 41Ca:Ca ratios that are significantly above background. PMID:23672965

  12. Note: Development of a volume-limited dot target for a high brightness extreme ultraviolet microplasma source

    SciTech Connect

    Dinh, Thanh Hung Suzuki, Yuhei; Hara, Hiroyuki; Higashiguchi, Takeshi; Hirose, Ryoichi; Ohashi, Hayato; Li, Bowen; Dunne, Padraig; O’Sullivan, Gerry; Sunahara, Atsushi

    2014-11-15

    We report on production of volume-limited dot targets based on electron beam lithographic and sputtering technologies for use in efficient high brightness extreme ultraviolet microplasma sources. We successfully produced cylindrical tin (Sn) targets with diameters of 10, 15, and 20 μm and a height of 150 nm. The calculated spectrum around 13.5 nm was in good agreement with that obtained experimentally.

  13. Large area thermal target board: An improvement to environmental effects and system parameters characterization

    NASA Astrophysics Data System (ADS)

    Watkins, Wendell R.; Bean, Brent L.; Munding, Peter D.

    1994-06-01

    Recent field tests have provided excellent opportunities to use a new characterization tool associated with the Mobile Imaging Spectroscopy Laboratory (MISL) of the Battlefield Environment Directorate, formerly the U.S. Army Atmospheric Sciences Laboratory. The MISL large area (1.8 by 1.8 m, uniform temperature, thermal target) was used for characterization and isolation of phenomena which impact target contrast. By viewing the target board from closeup and distant ranges simultaneously with the MISL thermal imagers, the inherent scene content could be calibrated and the degrading effects of atmospheric propagation could be isolated. The target board is equipped with several spatial frequency bar patterns, but only the largest 3.5-cycle full area bar pattern was used for the distant range of 1.6 km. The quantities measured with the target board include the inherent background change, the contrast transmission, and the atmospheric modulation transfer function. The MISL target board has a unique design which makes it lightweight with near perfect transition between the hot and cold portions of the bar pattern. The heated portion of the target is an elongated rectangular even which is tilted back at a 30 deg angle to form a 1.8 by 1.8 m square when viewed from the front. The cold bars we positioned in front of the heated oven surface and can be oriented in either the vertical or horizontal direction. The oven is mounted on a lightweight trailer for one- or two-man positioning. An attached metal and canvas structure is used to shield the entire target from both solar loading and cooling winds. The target board has a thin aluminum sheet front surface which is insulated from the oven's heating structure.

  14. Sphaeropsidin A shows promising activity against drug-resistant cancer cells by targeting regulatory volume increase

    PubMed Central

    Mathieu, Véronique; Chantôme, Aurélie; Lefranc, Florence; Cimmino, Alessio; Miklos, Walter; Paulitschke, Verena; Mohr, Thomas; Maddau, Lucia; Kornienko, Alexander; Berger, Walter; Vandier, Christophe; Evidente, Antonio; Delpire, Eric; Kiss, Robert

    2016-01-01

    Despite the recent advances in the treatment of tumors with intrinsic chemotherapy resistance, such as melanoma and renal cancers, their prognosis remains poor and new chemical agents with promising activity against these cancers are urgently needed. Sphaeropsidin A, a fungal metabolite whose anticancer potential had previously received little attention, was isolated from Diplodia cupressi and found to display specific anticancer activity in vitro against melanoma and kidney cancer subpanels in the National Cancer Institute (NCI) 60-cell line screen. The NCI data revealed a mean LC50 of ca. 10 μM and a cellular sensitivity profile that did not match that of any other agent in the 765,000 compound database. Subsequent mechanistic studies in melanoma and other multidrug-resistant in vitro cancer models showed that sphaeropsidin A can overcome apoptosis as well as multidrug resistance by inducing a marked and rapid cellular shrinkage related to the loss of intracellular Cl− and the decreased HCO3− concentration in the culture supernatant. These changes in ion homeostasis and the absence of effects on the plasma membrane potential were attributed to the sphaeropsidin A-induced impairment of regulatory volume increase (RVI). Preliminary results also indicate that depending on the type of cancer, the sphaeropsidin A effects on RVI could be related to Na–K–2Cl electroneutral cotransporter or Cl−/HCO3− anion exchanger(s) targeting. This study underscores the modulation of ion-transporter activity as a promising therapeutic strategy to combat drug-resistant cancers and identifies the fungal metabolite, sphaeropsidin A, as a lead to develop anticancer agents targeting RVI in cancer cells. PMID:25868554

  15. Sphaeropsidin A shows promising activity against drug-resistant cancer cells by targeting regulatory volume increase.

    PubMed

    Mathieu, Véronique; Chantôme, Aurélie; Lefranc, Florence; Cimmino, Alessio; Miklos, Walter; Paulitschke, Verena; Mohr, Thomas; Maddau, Lucia; Kornienko, Alexander; Berger, Walter; Vandier, Christophe; Evidente, Antonio; Delpire, Eric; Kiss, Robert

    2015-10-01

    Despite the recent advances in the treatment of tumors with intrinsic chemotherapy resistance, such as melanoma and renal cancers, their prognosis remains poor and new chemical agents with promising activity against these cancers are urgently needed. Sphaeropsidin A, a fungal metabolite whose anticancer potential had previously received little attention, was isolated from Diplodia cupressi and found to display specific anticancer activity in vitro against melanoma and kidney cancer subpanels in the National Cancer Institute (NCI) 60-cell line screen. The NCI data revealed a mean LC50 of ca. 10 µM and a cellular sensitivity profile that did not match that of any other agent in the 765,000 compound database. Subsequent mechanistic studies in melanoma and other multidrug-resistant in vitro cancer models showed that sphaeropsidin A can overcome apoptosis as well as multidrug resistance by inducing a marked and rapid cellular shrinkage related to the loss of intracellular Cl(-) and the decreased HCO3 (-) concentration in the culture supernatant. These changes in ion homeostasis and the absence of effects on the plasma membrane potential were attributed to the sphaeropsidin A-induced impairment of regulatory volume increase (RVI). Preliminary results also indicate that depending on the type of cancer, the sphaeropsidin A effects on RVI could be related to Na-K-2Cl electroneutral cotransporter or Cl(-)/HCO3 (-) anion exchanger(s) targeting. This study underscores the modulation of ion-transporter activity as a promising therapeutic strategy to combat drug-resistant cancers and identifies the fungal metabolite, sphaeropsidin A, as a lead to develop anticancer agents targeting RVI in cancer cells. PMID:25868554

  16. WE-D-17A-04: Magnetically Focused Proton Irradiation of Small Volume Targets

    SciTech Connect

    McAuley, G; Slater, J; Wroe, A

    2014-06-15

    Purpose: To explore the advantages of magnetic focusing for small volume proton irradiations and the potential clinical benefits for radiosurgery targets. The primary goal is to create narrow elongated proton beams of elliptical cross section with superior dose delivery characteristics compared to current delivery modalities (eg, collimated beams). In addition, more general beam shapes are also under investigation. Methods: Two prototype magnets consisting of 24 segments of samarium-cobalt (Sm2Co17) permanent magnetic material adhered into hollow cylinders were manufactured for testing. A single focusing magnet was placed on a positioning track on our Gantry 1 treatment table and 15 mm diameter proton beams with energies and modulation relevant to clinical radiosurgery applications (127 to 186 MeV, and 0 to 30 mm modulation) were delivered to a terminal water tank. Beam dose distributions were measured using a PTW diode detector and Gafchromic EBT2 film. Longitudinal and transverse dose profiles were analyzed and compared to data from Monte Carlo simulations analogous to the experimental setup. Results: The narrow elongated focused beam spots showed high elliptical symmetry indicating high magnet quality. In addition, when compared to unfocused beams, peak-to-entrance depth dose ratios were 11 to 14% larger (depending on presence or extent of modulation), and minor axis penumbras were 11 to 20% smaller (again depending on modulation) for focused beams. These results suggest that the use of rare earth magnet assemblies is practical and could improve dose-sparing of normal tissue and organs at risk while delivering enhanced dose to small proton radiosurgery targets. Conclusion: Quadrapole rare earth magnetic assemblies are a promising and inexpensive method to counteract particle out scatter that tends to degrade the peak to entrance performance of small field proton beams. Knowledge gained from current experiments will inform the design of a prototype treatment

  17. Large volume serial section tomography by Xe Plasma FIB dual beam microscopy.

    PubMed

    Burnett, T L; Kelley, R; Winiarski, B; Contreras, L; Daly, M; Gholinia, A; Burke, M G; Withers, P J

    2016-02-01

    Ga(+) Focused Ion Beam-Scanning Electron Microscopes (FIB-SEM) have revolutionised the level of microstructural information that can be recovered in 3D by block face serial section tomography (SST), as well as enabling the site-specific removal of smaller regions for subsequent transmission electron microscope (TEM) examination. However, Ga(+) FIB material removal rates limit the volumes and depths that can be probed to dimensions in the tens of microns range. Emerging Xe(+) Plasma Focused Ion Beam-Scanning Electron Microscope (PFIB-SEM) systems promise faster removal rates. Here we examine the potential of the method for large volume serial section tomography as applied to bainitic steel and WC-Co hard metals. Our studies demonstrate that with careful control of milling parameters precise automated serial sectioning can be achieved with low levels of milling artefacts at removal rates some 60× faster. Volumes that are hundreds of microns in dimension have been collected using fully automated SST routines in feasible timescales (<24h) showing good grain orientation contrast and capturing microstructural features at the tens of nanometres to the tens of microns scale. Accompanying electron back scattered diffraction (EBSD) maps show high indexing rates suggesting low levels of surface damage. Further, under high current Ga(+) FIB milling WC-Co is prone to amorphisation of WC surface layers and phase transformation of the Co phase, neither of which have been observed at PFIB currents as high as 60nA at 30kV. Xe(+) PFIB dual beam microscopes promise to radically extend our capability for 3D tomography, 3D EDX, 3D EBSD as well as correlative tomography. PMID:26683814

  18. Random forest classification of large volume structures for visuo-haptic rendering in CT images

    NASA Astrophysics Data System (ADS)

    Mastmeyer, Andre; Fortmeier, Dirk; Handels, Heinz

    2016-03-01

    For patient-specific voxel-based visuo-haptic rendering of CT scans of the liver area, the fully automatic segmentation of large volume structures such as skin, soft tissue, lungs and intestine (risk structures) is important. Using a machine learning based approach, several existing segmentations from 10 segmented gold-standard patients are learned by random decision forests individually and collectively. The core of this paper is feature selection and the application of the learned classifiers to a new patient data set. In a leave-some-out cross-validation, the obtained full volume segmentations are compared to the gold-standard segmentations of the untrained patients. The proposed classifiers use a multi-dimensional feature space to estimate the hidden truth, instead of relying on clinical standard threshold and connectivity based methods. The result of our efficient whole-body section classification are multi-label maps with the considered tissues. For visuo-haptic simulation, other small volume structures would have to be segmented additionally. We also take a look into these structures (liver vessels). For an experimental leave-some-out study consisting of 10 patients, the proposed method performs much more efficiently compared to state of the art methods. In two variants of leave-some-out experiments we obtain best mean DICE ratios of 0.79, 0.97, 0.63 and 0.83 for skin, soft tissue, hard bone and risk structures. Liver structures are segmented with DICE 0.93 for the liver, 0.43 for blood vessels and 0.39 for bile vessels.

  19. Determination of the large scale volume weighted halo velocity bias in simulations

    NASA Astrophysics Data System (ADS)

    Zheng, Yi; Zhang, Pengjie; Jing, Yipeng

    2015-06-01

    A profound assumption in peculiar velocity cosmology is bv=1 at sufficiently large scales, where bv is the volume-weighted halo(galaxy) velocity bias with respect to the matter velocity field. However, this fundamental assumption has not been robustly verified in numerical simulations. Furthermore, it is challenged by structure formation theory (Bardeen, Bond, Kaiser and Szalay, Astrophys. J. 304, 15 (1986); Desjacques and Sheth, Phys. Rev D 81, 023526 (2010), which predicts the existence of velocity bias (at least for proto-halos) due to the fact that halos reside in special regions (local density peaks). The major obstacle to measuring the volume-weighted velocity from N-body simulations is an unphysical sampling artifact. It is entangled in the measured velocity statistics and becomes significant for sparse populations. With recently improved understanding of the sampling artifact (Zhang, Zheng and Jing, 2015, PRD; Zheng, Zhang and Jing, 2015, PRD), for the first time we are able to appropriately correct this sampling artifact and then robustly measure the volume-weighted halo velocity bias. (1) We verify bv=1 within 2% model uncertainty at k ≲0.1 h /Mpc and z =0 - 2 for halos of mass ˜1012- 1013h-1M⊙ and, therefore, consolidate a foundation for the peculiar velocity cosmology. (2) We also find statistically significant signs of bv≠1 at k ≳0.1 h /Mpc . Unfortunately, whether this is real or caused by a residual sampling artifact requires further investigation. Nevertheless, cosmology based on the k ≳0.1 h /Mpc velocity data should be careful with this potential velocity bias.

  20. Measurements of Elastic and Inelastic Properties under Simulated Earth's Mantle Conditions in Large Volume Apparatus

    NASA Astrophysics Data System (ADS)

    Mueller, H. J.

    2012-12-01

    The interpretation of highly resolved seismic data from Earths deep interior require measurements of the physical properties of Earth's materials under experimental simulated mantle conditions. More than decade ago seismic tomography clearly showed subduction of crustal material can reach the core mantle boundary under specific circumstances. That means there is no longer space for the assumption deep mantle rocks might be much less complex than deep crustal rocks known from exhumation processes. Considering this geophysical high pressure research is faced the challenge to increase pressure and sample volume at the same time to be able to perform in situ experiments with representative complex samples. High performance multi anvil devices using novel materials are the most promising technique for this exciting task. Recent large volume presses provide sample volumes 3 to 7 orders of magnitude bigger than in diamond anvil cells far beyond transition zone conditions. The sample size of several cubic millimeters allows elastic wave frequencies in the low to medium MHz range. Together with the small and even adjustable temperature gradients over the whole sample this technique makes anisotropy and grain boundary effects in complex systems accessible for elastic and inelastic properties measurements in principle. The measurements of both elastic wave velocities have also no limits for opaque and encapsulated samples. The application of triple-mode transducers and the data transfer function technique for the ultrasonic interferometry reduces the time for saving the data during the experiment to about a minute or less. That makes real transient measurements under non-equilibrium conditions possible. A further benefit is, both elastic wave velocities are measured exactly simultaneously. Ultrasonic interferometry necessarily requires in situ sample deformation measurement by X-radiography. Time-resolved X-radiography makes in situ falling sphere viscosimetry and even the

  1. Probing the Earth’s interior with a large-volume liquid scintillator detector

    NASA Astrophysics Data System (ADS)

    Hochmuth, Kathrin A.; Feilitzsch, Franz V.; Fields, Brian D.; Undagoitia, Teresa Marrodán; Oberauer, Lothar; Potzel, Walter; Raffelt, Georg G.; Wurm, Michael

    2007-02-01

    A future large-volume liquid scintillator detector would provide a high-statistics measurement of terrestrial antineutrinos originating from β-decays of the uranium and thorium chains. In addition, the forward displacement of the neutron in the detection reaction ν+p→n+e provides directional information. We investigate the requirements on such detectors to distinguish between certain geophysical models on the basis of the angular dependence of the geoneutrino flux. Our analysis is based on a Monte-Carlo simulation with different levels of light yield, considering both unloaded and gadolinium-loaded scintillators. We find that a 50 kt detector such as the proposed LENA (Low Energy Neutrino Astronomy) will detect deviations from isotropy of the geoneutrino flux significantly. However, with an unloaded scintillator the time needed for a useful discrimination between different geophysical models is too large if one uses the directional information alone. A Gd-loaded scintillator improves the situation considerably, although a 50 kt detector would still need several decades to distinguish between a geophysical reference model and one with a large neutrino source in the Earth’s core. However, a high-statistics measurement of the total geoneutrino flux and its spectrum still provides an extremely useful glance at the Earth’s interior.

  2. Detection of fast flying nanoparticles by light scattering over a large volume

    NASA Astrophysics Data System (ADS)

    Pettazzi, F.; Bäumer, S.; van der Donck, J.; Deutz, A.

    2015-06-01

    is a well-known detection method which is applied in many different scientific and technology domains including atmospheric physics, environmental control, and biology. It allows contactless and remote detection of sub-micron size particles. However, methods for detecting a single fast moving particle smaller than 100 nm are lacking. In the present work we report a preliminary design study of an inline large area detector for nanoparticles larger than 50 nm which move with velocities up to 100 m/s. The detector design is based on light scattering using commercially available components. The presented design takes into account all challenges connected to the inline implementation of the scattering technique in the system: the need for the detector to have a large field of view to cover a volume with a footprint commensurate to an area of 100mm x 100mm, the necessity to sense nanoparticles transported at high velocity, and the requirement of large capture rate with a false detection as low as one false positive per week. The impact of all these stringent requirements on the expected sensitivity and performances of the device is analyzed by mean of a dedicated performance model.

  3. A large volume cell for in situ neutron diffraction studies of hydrothermal crystallizations

    NASA Astrophysics Data System (ADS)

    Xia, Fang; Qian, Gujie; Brugger, Joël; Studer, Andrew; Olsen, Scott; Pring, Allan

    2010-10-01

    A hydrothermal cell with 320 ml internal volume has been designed and constructed for in situ neutron diffraction studies of hydrothermal crystallizations. The cell design adopts a dumbbell configuration assembled with standard commercial stainless steel components and a zero-scattering Ti-Zr alloy sample compartment. The fluid movement and heat transfer are simply driven by natural convection due to the natural temperature gradient along the fluid path, so that the temperature at the sample compartment can be stably sustained by heating the fluid in the bottom fluid reservoir. The cell can operate at temperatures up to 300 °C and pressures up to 90 bars and is suitable for studying reactions requiring a large volume of hydrothermal fluid to damp out the negative effect from the change of fluid composition during the course of the reactions. The capability of the cell was demonstrated by a hydrothermal phase transformation investigation from leucite (KAlSi2O6) to analcime (NaAlSi2O6ṡH2O) at 210 °C on the high intensity powder diffractometer Wombat in ANSTO. The kinetics of the transformation has been resolved by collecting diffraction patterns every 10 min followed by Rietveld quantitative phase analysis. The classical Avrami/Arrhenius analysis gives an activation energy of 82.3±1.1 kJ mol-1. Estimations of the reaction rate under natural environments by extrapolations agree well with petrological observations.

  4. Evaluation of Large Volume SrI2(Eu) Scintillator Detectors

    SciTech Connect

    Sturm, B W; Cherepy, N J; Drury, O B; Thelin, P A; Fisher, S E; Magyar, A F; Payne, S A; Burger, A; Boatner, L A; Ramey, J O; Shah, K S; Hawrami, R

    2010-11-18

    There is an ever increasing demand for gamma-ray detectors which can achieve good energy resolution, high detection efficiency, and room-temperature operation. We are working to address each of these requirements through the development of large volume SrI{sub 2}(Eu) scintillator detectors. In this work, we have evaluated a variety of SrI{sub 2} crystals with volumes >10 cm{sup 3}. The goal of this research was to examine the causes of energy resolution degradation for larger detectors and to determine what can be done to mitigate these effects. Testing both packaged and unpackaged detectors, we have consistently achieved better resolution with the packaged detectors. Using a collimated gamma-ray source, it was determined that better energy resolution for the packaged detectors is correlated with better light collection uniformity. A number of packaged detectors were fabricated and tested and the best spectroscopic performance was achieved for a 3% Eu doped crystal with an energy resolution of 2.93% FWHM at 662keV. Simulations of SrI{sub 2}(Eu) crystals were also performed to better understand the light transport physics in scintillators and are reported. This study has important implications for the development of SrI{sub 2}(Eu) detectors for national security purposes.

  5. Lotung large-scale seismic test strong motion records. Volume 1, General description: Final report

    SciTech Connect

    Not Available

    1992-03-01

    The Electric Power Research Institute (EPRI), in cooperation with the Taiwan Power Company (TPC), constructed two models (1/4 scale and 1/12 scale) of a nuclear plant concrete containment structure at a seismically active site in Lotung, Taiwan. Extensive instrumentation was deployed to record both structural and ground responses during earthquakes. The experiment, generally referred to as the Lotung Large-Scale Seismic Test (LSST), was used to gather data for soil-structure interaction (SSI) analysis method evaluation and validation as well as for site ground response investigation. A number of earthquakes having local magnitudes ranging from 4.5 to 7.0 have been recorded at the LSST site since the completion of the test facility in September 1985. This report documents the earthquake data, both raw and processed, collected from the LSST experiment. Volume 1 of the report provides general information on site location, instrument types and layout, data acquisition and processing, and data file organization. The recorded data are described chronologically in subsequent volumes of the report.

  6. A large volume uniform plasma generator for the experiments of electromagnetic wave propagation in plasma

    SciTech Connect

    Yang Min; Li Xiaoping; Xie Kai; Liu Donglin; Liu Yanming

    2013-01-15

    A large volume uniform plasma generator is proposed for the experiments of electromagnetic (EM) wave propagation in plasma, to reproduce a 'black out' phenomenon with long duration in an environment of the ordinary laboratory. The plasma generator achieves a controllable approximate uniform plasma in volume of 260 mm Multiplication-Sign 260 mm Multiplication-Sign 180 mm without the magnetic confinement. The plasma is produced by the glow discharge, and the special discharge structure is built to bring a steady approximate uniform plasma environment in the electromagnetic wave propagation path without any other barriers. In addition, the electron density and luminosity distributions of plasma under different discharge conditions were diagnosed and experimentally investigated. Both the electron density and the plasma uniformity are directly proportional to the input power and in roughly reverse proportion to the gas pressure in the chamber. Furthermore, the experiments of electromagnetic wave propagation in plasma are conducted in this plasma generator. Blackout phenomena at GPS signal are observed under this system and the measured attenuation curve is of reasonable agreement with the theoretical one, which suggests the effectiveness of the proposed method.

  7. Alveolar albumin leakage during large tidal volume ventilation and surfactant dysfunction.

    PubMed

    Liu, J M; Evander, E; Zhao, J; Wollmer, P; Jonson, B

    2001-07-01

    Detergent given as an aerosol and large tidal volume ventilation (LTVV) have been observed, by us, to promote lung injury by an additive effect on alveolocapillary barrier function. The surfactant system may be further damaged if protein leakage occurs into the alveoli. The aim was to study the effect of detergent and LTVV on the alveolar leakage of albumin and also the effect of detergent on surface activity of lung washings and lung tissue extracts. Technetium-99m-labelled human serum albumin was given intravenously. The alveolar leakage of albumin was measured after perturbing the surfactant system with the detergent dioctyl sodium sulfosuccinate either singly or in combination with LTVV. Four groups of rabbits were studied after 3 h of experimental ventilation. Surface tension measurements of tissue extracts, lung mechanics and gas exchange did not show any differences between groups. Wet lung weight and albumin leakage were significantly increased in the two groups subjected to LTVV compared with groups given normal tidal volume ventilation. Low doses of detergent did not affect surface activity of lung tissue extracts or alveolar leakage of albumin. LTVV increased alveolar leakage of albumin and produced oedema. No additive effect was seen when detergent and LTVV were combined. PMID:11442575

  8. Detection and Isolation of H5N1 Influenza virus from Large Volumes of Natural Water

    PubMed Central

    Khalenkov, Alexey; Laver, W. Graeme; Webster, Robert G.

    2009-01-01

    Various species of aquatic or wetlands birds can be the natural reservoir of avian influenza A viruses of all hemagglutinin (HA) subtypes. Shedding of the virus into water leads to transmission between waterfowl and is a major threat for epidemics in poultry and pandemics in humans. Concentrations of the influenza virus in natural water reservoirs are often too low to be detected by most methods. The procedure was designed to detect low concentrations of the influenza virus in large volumes of water without the need for costly installations and reagents. The virus was adsorbed onto formalin-fixed erythrocytes and subsequently isolated in chicken embryos. Sensitivity of the method was determined using a reverse-genetic H5N1 virus. A concentration as low as 0.03 of the 50% egg infection dose per milliliter (EID50/ml) of the initial volume of water was effectively detected. The probability of detection was ∼13%, which is comparable to that of detecting the influenza virus M-gene by PCR amplification. The method can be used by field workers, ecologists, ornithologists, and researchers who need a simple method to isolate H5N1 influenza virus from natural reservoirs. The detection and isolation of virus in embryonated chicken eggs may help epidemiologic, genetic, and vaccine studies. PMID:18325605

  9. Large volume liquid helium relief device verifacation apparatus for the alpha magnetic spectrometer

    NASA Astrophysics Data System (ADS)

    Klimas, Richard John; McIntyre, P.; Colvin, John; Zeigler, John; Van Sciver, Steven; Ting, Samual

    2012-06-01

    Here we present details of an experiment for verifying the liquid helium vessel relief device for the Alpha Magnetic Spectrometer-02 (AMS-02). The relief device utilizes a series of rupture discs designed to open in the event of a vacuum failure of the AMS-02 cryogenic system. A failure of this type is classified to be a catastrophic loss of insulating vacuum accident. This apparatus differs from other approaches due to the size of the test volumes used. The verification apparatus consists of a 250 liter vessel used for the test quantity of liquid helium that is located inside a vacuum insulated vessel. A large diameter valve is suddenly opened to simulate the loss of insulating vacuum in a repeatable manner. Pressure and temperature vs. time data are presented and discussed in the context of the AMS-02 hardware configuration.

  10. Measurement of the Velocity of Neutrinos from the CNGS Beam with the Large Volume Detector

    NASA Astrophysics Data System (ADS)

    Agafonova, N. Yu.; Aglietta, M.; Antonioli, P.; Ashikhmin, V. V.; Bari, G.; Bertoni, R.; Bressan, E.; Bruno, G.; Dadykin, V. L.; Fulgione, W.; Galeotti, P.; Garbini, M.; Ghia, P. L.; Giusti, P.; Kemp, E.; Mal'gin, A. S.; Miguez, B.; Molinario, A.; Persiani, R.; Pless, I. A.; Ryasny, V. G.; Ryazhskaya, O. G.; Saavedra, O.; Sartorelli, G.; Shakyrianova, I. R.; Selvi, M.; Trinchero, G. C.; Vigorito, C.; Yakushev, V. F.; Zichichi, A.; Razeto, A.

    2012-08-01

    We report the measurement of the time of flight of ˜17GeV νμ on the CNGS baseline (732 km) with the Large Volume Detector (LVD) at the Gran Sasso Laboratory. The CERN-SPS accelerator has been operated from May 10th to May 24th 2012, with a tightly bunched-beam structure to allow the velocity of neutrinos to be accurately measured on an event-by-event basis. LVD has detected 48 neutrino events, associated with the beam, with a high absolute time accuracy. These events allow us to establish the following limit on the difference between the neutrino speed and the light velocity: -3.8×10-6<(vν-c)/c<3.1×10-6 (at 99% C.L.). This value is an order of magnitude lower than previous direct measurements.

  11. Isolation of organic acids from large volumes of water by adsorption chromatography

    USGS Publications Warehouse

    Aiken, George R.

    1984-01-01

    The concentrations of dissolved organic carbon from most natural waters ranges from 1 to 20 milligrams carbon per liter, of which approximately 75 percent are organic acids. These acids can be chromatographically fractionated into hydrophobic organic acids, such as humic substances, and hydrophilic organic acids. To effectively study any of these organic acids, they must be isolated from other organic and inorganic species, and concentrated. Usually, large volumes of water must be processed to obtain sufficient quantities of material, and adsorption chromatography on synthetic, macroporous resins has proven to be a particularly effective method for this purpose. The use of the nonionic Amberlite XAD-8 and Amberlite XAD-4 resins and the anion exchange resin Duolite A-7 for isolating and concentrating organic acids from water is presented.

  12. Measurement of the velocity of neutrinos from the CNGS beam with the large volume detector.

    PubMed

    Agafonova, N Yu; Aglietta, M; Antonioli, P; Ashikhmin, V V; Bari, G; Bertoni, R; Bressan, E; Bruno, G; Dadykin, V L; Fulgione, W; Galeotti, P; Garbini, M; Ghia, P L; Giusti, P; Kemp, E; Mal'gin, A S; Miguez, B; Molinario, A; Persiani, R; Pless, I A; Ryasny, V G; Ryazhskaya, O G; Saavedra, O; Sartorelli, G; Shakyrianova, I R; Selvi, M; Trinchero, G C; Vigorito, C; Yakushev, V F; Zichichi, A; Razeto, A

    2012-08-17

    We report the measurement of the time of flight of ∼17 GeV ν(μ) on the CNGS baseline (732 km) with the Large Volume Detector (LVD) at the Gran Sasso Laboratory. The CERN-SPS accelerator has been operated from May 10th to May 24th 2012, with a tightly bunched-beam structure to allow the velocity of neutrinos to be accurately measured on an event-by-event basis. LVD has detected 48 neutrino events, associated with the beam, with a high absolute time accuracy. These events allow us to establish the following limit on the difference between the neutrino speed and the light velocity: -3.8 × 10(-6) < (v(ν)-c)/c < 3.1 × 10(-6) (at 99% C.L.). This value is an order of magnitude lower than previous direct measurements. PMID:23006352

  13. Monte Carlo calculations of the HPGe detector efficiency for radioactivity measurement of large volume environmental samples.

    PubMed

    Azbouche, Ahmed; Belgaid, Mohamed; Mazrou, Hakim

    2015-08-01

    A fully detailed Monte Carlo geometrical model of a High Purity Germanium detector with a (152)Eu source, packed in Marinelli beaker, was developed for routine analysis of large volume environmental samples. Then, the model parameters, in particular, the dead layer thickness were adjusted thanks to a specific irradiation configuration together with a fine-tuning procedure. Thereafter, the calculated efficiencies were compared to the measured ones for standard samples containing (152)Eu source filled in both grass and resin matrices packed in Marinelli beaker. From this comparison, a good agreement between experiment and Monte Carlo calculation results was obtained highlighting thereby the consistency of the geometrical computational model proposed in this work. Finally, the computational model was applied successfully to determine the (137)Cs distribution in soil matrix. From this application, instructive results were achieved highlighting, in particular, the erosion and accumulation zone of the studied site. PMID:25982445

  14. A large volume 2000 MPA air source for the radiatively driven hypersonic wind tunnel

    SciTech Connect

    Constantino, M

    1999-07-14

    An ultra-high pressure air source for a hypersonic wind tunnel for fluid dynamics and combustion physics and chemistry research and development must provide a 10 kg/s pure air flow for more than 1 s at a specific enthalpy of more than 3000 kJ/kg. The nominal operating pressure and temperature condition for the air source is 2000 MPa and 900 K. A radial array of variable radial support intensifiers connected to an axial manifold provides an arbitrarily large total high pressure volume. This configuration also provides solutions to cross bore stress concentrations and the decrease in material strength with temperature. [hypersonic, high pressure, air, wind tunnel, ground testing

  15. Aerodynamics of the Large-Volume, Flow-Through Detector System. Final report

    SciTech Connect

    Reed, H.; Saric, W.; Laananen, D.; Martinez, C.; Carrillo, R.; Myers, J.; Clevenger, D.

    1996-03-01

    The Large-Volume Flow-Through Detector System (LVFTDS) was designed to monitor alpha radiation from Pu, U, and Am in mixed-waste incinerator offgases; however, it can be adapted to other important monitoring uses that span a number of potential markets, including site remediation, indoor air quality, radon testing, and mine shaft monitoring. Goal of this effort was to provide mechanical design information for installation of LVFTDS in an incinerator, with emphasis on ability to withstand the high temperatures and high flow rates expected. The work was successfully carried out in three stages: calculation of pressure drop through the system, materials testing to determine surrogate materials for wind-tunnel testing, and wind-tunnel testing of an actual configuration.

  16. The ADVANCE project: Formal evaluation of the targeted deployment. Volume 1

    SciTech Connect

    1997-01-01

    The Advanced Driver and Vehicle Advisory Navigation ConcEpt (ADVANCE) was an invehicle advanced traveler information system (ATIS) that operated in the northwest suburbs of Chicago, Illinois. It was designed to provide origin-destination shortest-time route guidance to a vehicle based on (a) an on-board static (fixed) data base of average network link travel times by time of day, combined as available and appropriate with (b) dynamic (real-time) information on traffic conditions provided by radio frequency (RF) communications to and from a traffic information center (TIC). Originally conceived in 1990 as a major project that would have installed 3,000 to 5,000 route guidance units in privately owned vehicles throughout the test area, ADVANCE was restructured in 1995 as a {open_quotes}targeted deployment,{close_quotes} in which approximately 80 vehicles were to be equipped with the guidance units - Mobile Navigation Assistants (MNAs) - to be in full communication with the TIC while driving the ADVANCE test area road system. Volume one consists of the evaluation managers overview report, and several appendices containing test results.

  17. Rapid plasma volume decline upon quiet standing reflects large filtration capacity in dependent limbs.

    PubMed

    Lundvall, J; Bjerkhoel, P; Quittenbaum, S; Lindgren, P

    1996-10-01

    The plasma volume (PV) decline upon 1.5, 3, 5, 8, 10, 15 and 35 min periods of quiet standing was studied (Hb/Hct) in male volunteers (n = 7). This approach permitted detailed definition of the time-course of the volume change. PV decreased by as much as 8.5 +/- 0.4% (328 +/- 15 mL) after 3 min standing and by no less than 11.7 +/- 0.4% (466 +/- 22 mL) after 5 min. The reduction was 14.3 +/- 0.7, 16.8 +/- 0.8, 17.7 +/- 0.8 and 17.4 +/- 0.9% after 8, 10, 15 and 35 min, or 568 +/- 30, 671 +/- 39, 707 +/- 41 and 691 +/- 44 mL. These data, in conjunction with the 1.5 min experiments, indicated a very rapid approximately 125 mL min-1 fluid loss initially on standing. However, the PV loss showed marked decline with time and was virtually completed within 10 min. Finally, the observation was made that the rate of PV recovery after standing was inversely related to the duration of standing. It is suggested that (a) the transcapillary hydraulic conductivity in the dependent limbs, the predominant targets for fluid filtration on standing, is about 0.010 mL min-1 100 mL-1 mmHg-1 and much greater than indicated previously. However, protective mechanisms restrict rapid fluid loss to early phases of standing. (b) Decrease in PV may contribute importantly to haemodynamic stress and to orthostatic, fainting reactions during short quiet standing. Apparently, PV loss may be equally important as pooling of blood, traditionally regarded as a dominant cause of adverse orthostatic reactions. (c) The duration of standing, as such, may be critical for the rate of PV recovery after standing. PMID:8899063

  18. Anatomic Landmarks Versus Fiducials for Volume-Staged Gamma Knife Radiosurgery for Large Arteriovenous Malformations

    SciTech Connect

    Petti, Paula L. . E-mail: ppetti@radonc.ucsf.edu; Coleman, Joy; McDermott, Michael; Smith, Vernon; Larson, David A.

    2007-04-01

    Purpose: The purpose of this investigation was to compare the accuracy of using internal anatomic landmarks instead of surgically implanted fiducials in the image registration process for volume-staged gamma knife (GK) radiosurgery for large arteriovenous malformations. Methods and Materials: We studied 9 patients who had undergone 10 staged GK sessions for large arteriovenous malformations. Each patient had fiducials surgically implanted in the outer table of the skull at the first GK treatment. These markers were imaged on orthogonal radiographs, which were scanned into the GK planning system. For the same patients, 8-10 pairs of internal landmarks were retrospectively identified on the three-dimensional time-of-flight magnetic resonance imaging studies that had been obtained for treatment. The coordinate transformation between the stereotactic frame space for subsequent treatment sessions was then determined by point matching, using four surgically embedded fiducials and then using four pairs of internal anatomic landmarks. In both cases, the transformation was ascertained by minimizing the chi-square difference between the actual and the transformed coordinates. Both transformations were then evaluated using the remaining four to six pairs of internal landmarks as the test points. Results: Averaged over all treatment sessions, the root mean square discrepancy between the coordinates of the transformed and actual test points was 1.2 {+-} 0.2 mm using internal landmarks and 1.7 {+-} 0.4 mm using the surgically implanted fiducials. Conclusion: The results of this study have shown that using internal landmarks to determine the coordinate transformation between subsequent magnetic resonance imaging scans for volume-staged GK arteriovenous malformation treatment sessions is as accurate as using surgically implanted fiducials and avoids an invasive procedure.

  19. Building high-performance system for processing a daily large volume of Chinese satellites imagery

    NASA Astrophysics Data System (ADS)

    Deng, Huawu; Huang, Shicun; Wang, Qi; Pan, Zhiqiang; Xin, Yubin

    2014-10-01

    The number of Earth observation satellites from China increases dramatically recently and those satellites are acquiring a large volume of imagery daily. As the main portal of image processing and distribution from those Chinese satellites, the China Centre for Resources Satellite Data and Application (CRESDA) has been working with PCI Geomatics during the last three years to solve two issues in this regard: processing the large volume of data (about 1,500 scenes or 1 TB per day) in a timely manner and generating geometrically accurate orthorectified products. After three-year research and development, a high performance system has been built and successfully delivered. The high performance system has a service oriented architecture and can be deployed to a cluster of computers that may be configured with high end computing power. The high performance is gained through, first, making image processing algorithms into parallel computing by using high performance graphic processing unit (GPU) cards and multiple cores from multiple CPUs, and, second, distributing processing tasks to a cluster of computing nodes. While achieving up to thirty (and even more) times faster in performance compared with the traditional practice, a particular methodology was developed to improve the geometric accuracy of images acquired from Chinese satellites (including HJ-1 A/B, ZY-1-02C, ZY-3, GF-1, etc.). The methodology consists of fully automatic collection of dense ground control points (GCP) from various resources and then application of those points to improve the photogrammetric model of the images. The delivered system is up running at CRESDA for pre-operational production and has been and is generating good return on investment by eliminating a great amount of manual labor and increasing more than ten times of data throughput daily with fewer operators. Future work, such as development of more performance-optimized algorithms, robust image matching methods and application

  20. Lens-free optical tomographic microscope with a large imaging volume on a chip

    PubMed Central

    Isikman, Serhan O.; Bishara, Waheb; Mavandadi, Sam; Yu, Frank W.; Feng, Steve; Lau, Randy; Ozcan, Aydogan

    2011-01-01

    We present a lens-free optical tomographic microscope, which enables imaging a large volume of approximately 15 mm3 on a chip, with a spatial resolution of < 1 μm ×  < 1 μm ×  < 3 μm in x, y and z dimensions, respectively. In this lens-free tomography modality, the sample is placed directly on a digital sensor array with, e.g., ≤ 4 mm distance to its active area. A partially coherent light source placed approximately 70 mm away from the sensor is employed to record lens-free in-line holograms of the sample from different viewing angles. At each illumination angle, multiple subpixel shifted holograms are also recorded, which are digitally processed using a pixel superresolution technique to create a single high-resolution hologram of each angular projection of the object. These superresolved holograms are digitally reconstructed for an angular range of ± 50°, which are then back-projected to compute tomograms of the sample. In order to minimize the artifacts due to limited angular range of tilted illumination, a dual-axis tomography scheme is adopted, where the light source is rotated along two orthogonal axes. Tomographic imaging performance is quantified using microbeads of different dimensions, as well as by imaging wild-type Caenorhabditis elegans. Probing a large volume with a decent 3D spatial resolution, this lens-free optical tomography platform on a chip could provide a powerful tool for high-throughput imaging applications in, e.g., cell and developmental biology. PMID:21504943

  1. Effects of Pre-Existing Target Structure on the Formation of Large Craters

    NASA Technical Reports Server (NTRS)

    Barnouin-Jha, O. S.; Cintala, M. J.; Crawford, D. A.

    2003-01-01

    The shapes of large-scale craters and the mechanics responsible for melt generation are influenced by broad and small-scale structures present in a target prior to impact. For example, well-developed systems of fractures often create craters that appear square in outline, good examples being Meteor Crater, AZ and the square craters of 433 Eros. Pre-broken target material also affects melt generation. Kieffer has shown how the shock wave generated in Coconino sandstone at Meteor crater created reverberations which, in combination with the natural target heterogeneity present, created peaks and troughs in pressure and compressed density as individual grains collided to produce a range of shock mineralogies and melts within neighboring samples. In this study, we further explore how pre-existing target structure influences various aspects of the cratering process. We combine experimental and numerical techniques to explore the connection between the scales of the impact generated shock wave and the pre-existing target structure. We focus on the propagation of shock waves in coarse, granular media, emphasizing its consequences on excavation, crater growth, ejecta production, cratering efficiency, melt generation, and crater shape. As a baseline, we present a first series of results for idealized targets where the particles are all identical in size and possess the same shock impedance. We will also present a few results, whereby we increase the complexities of the target properties by varying the grain size, strength, impedance and frictional properties. In addition, we investigate the origin and implications of reverberations that are created by the presence of physical and chemical heterogeneity in a target.

  2. Designing an elastomeric binder for large-volume-change electrodes for lithium-ion batteries

    NASA Astrophysics Data System (ADS)

    Chen, Zonghai

    It is of commercial importance to develop high capacity negative and positive electrode materials for lithium-ion batteries to meet the energy requirements of portable electronic devices. Excellent capacity retention has been achieved for thin sputtered films of amorphous Si, Ge and Si-Sn alloys even when cycled to 2000 mAh/g and above, which suggests that amorphous alloys are capable of extended cycling. However, PVDF-based composite electrodes incorporating a-Si0.64Sn0.36/Ag powder (10 wt% silver coating) (˜10mum) still suffer from severe capacity fading because of the huge volumetric changes of a-Si0.64Sn0.36/Ag during charge/discharge cycling. It is the objective of this thesis to understand the problem scientifically and to propose practical solutions to solve this problem. Mechanical studies of binders for lithium battery electrodes have never been reported in the literature. The mechanical properties of commonly used binders, such as poly(vinylidene fluoride) (PVDF), haven't been challenged because commercially used active materials, such as LiCoO2 and graphite, have small volumetric changes (<10%) during charge/discharge cycling. However, the recently proposed metallic alloys have huge volumetric changes (up to 250%) during cycling. In this case, the mechanical properties of the binder become critical. A tether model is proposed to qualitatively understand the capacity fading of high-volume-change electrodes, and to predict the properties of a good binder system. A crosslinking/coupling route was used to modify the binder system according to the requirements of the tether model. A poly(vinylidene fluoride-tetrafluoroethylenepropylene)-based elastomeric binder system was designed to successfully improve the capacity retention of a-Si0.64 Sn0.36/Ag composite electrodes. In this thesis, it has also proven nontrivial to maximize the capacity retention of large-volume-change electrodes even when a fixed elastomeric binder system was used. The parameters that

  3. Frontiers of High-Pressure Research: Next Generation Large Volume Gem Anvil Devices

    NASA Astrophysics Data System (ADS)

    Hemley, R. J.; Yan, C.; Xu, J.; Mao, W.; Mao, H.

    2003-12-01

    By any measure, the diamond anvil cell has revolutionized static high-pressure research, and in particular experimental study of Earth and planetary deep interiors. Despite the prowess of the technique, however, its range of applicability is in many ways quite limited and its potential not yet fully realized. We have embarked on a program to develop the next generation high-pressure devices that will allow new classes of in situ high P-T measurements critical to understanding the structure, dynamics, and evolution of planetary bodies. A crucial component of this effort is the enlargement of sample volume without sacrificing the unmatched pressure range and versatility of diamond anvil cells. In conventional studies, pressures to several hundred GPa are generated on sample volumes down to the picoliter range. The small sample size is determined by the availability of perfect diamonds as anvils, which are currently of order of 0.2-0.4 up to a few carats. The small sample size has precluded, or greatly limited the accuracy of, certain classes of high pressure experiments. The production of high-quality single-crystal diamond by microwave plasma chemical vapor deposition (CVD) at very high growth rate of 50-150 μ m/h has opened new opportunities for the creation of large perfect single crystal diamond as anvils.1 This morphology, photoluminescence, Raman spectra, and mechanical properties of the CVD diamond have been examined in detail. Of particular interest is our finding of very high strength and improved optical properties of CVD diamond annealed at high pressures and temperatures.2 In addition, hybrid conventional synthetic/CVD single crystals have been successfully used to generate pressures in the multimegabar range (>200 GPa).3 A parallel initiative involves the continued development of moissanite anvils, which can already be produced as large, perfect crystals and can reach pressures above 60 GPa. Recent advances include the design and fabrication of

  4. Determination of 235U enrichment with a large volume CZT detector

    NASA Astrophysics Data System (ADS)

    Mortreau, Patricia; Berndt, Reinhard

    2006-01-01

    Room-temperature CdZnTe and CdTe detectors have been routinely used in the field of Nuclear Safeguards for many years [Ivanov et al., Development of large volume hemispheric CdZnTe detectors for use in safeguards applications, ESARDA European Safeguards Research and Development Association, Le Corum, Montpellier, France, 1997, p. 447; Czock and Arlt, Nucl. Instr. and Meth. A 458 (2001) 175; Arlt et al., Nucl. Instr. and Meth. A 428 (1999) 127; Lebrun et al., Nucl. Instr. and Meth. A 448 (2000) 598; Aparo et al., Development and implementation of compact gamma spectrometers for spent fuel measurements, in: Proceedings, 21st Annual ESARDA, 1999; Arlt and Rudsquist, Nucl. Instr. and Meth. A 380 (1996) 455; Khusainov et al., High resolution pin type CdTe detectors for the verification of nuclear material, in: Proceedings, 17th Annual ESARDA European Safeguards Research and Development Association, 1995; Mortreau and Berndt, Nucl. Instr. and Meth. A 458 (2001) 183; Ruhter et al., UCRL-JC-130548, 1998; Abbas et al., Nucl. Instr. and Meth. A 405 (1998) 153; Ruhter and Gunnink, Nucl. Instr. and Meth. A 353 (1994) 716]. Due to their performance and small size, they are ideal detectors for hand-held applications such as verification of spent and fresh fuel, U/Pu attribute tests as well as for the determination of 235U enrichment. The hemispherical CdZnTe type produced by RITEC (Riga, Latvia) [Ivanov et al., 1997] is the most widely used detector in the field of inspection. With volumes ranging from 2 to 1500 mm 3, their spectral performance is such that the use of electronic processing to correct the pulse shape is not required. This paper reports on the work carried out with a large volume (15×15×7.5 mm 3) and high efficiency hemispherical CdZnTe detector for the determination of 235U enrichment. The measurements were made with certified uranium samples whose enrichment ranging from 0.31% to 92.42%, cover the whole range of in-field measurement conditions. The interposed

  5. Large Volume Coagulation Utilizing Multiple Cavitation Clouds Generated by Array Transducer Driven by 32 Channel Drive Circuits

    NASA Astrophysics Data System (ADS)

    Nakamura, Kotaro; Asai, Ayumu; Sasaki, Hiroshi; Yoshizawa, Shin; Umemura, Shin-ichiro

    2013-07-01

    High-intensity focused ultrasound (HIFU) treatment is a noninvasive treatment, in which focused ultrasound is generated outside the body and coagulates a diseased tissue. The advantage of this method is minimal physical and mental stress to the patient, and the disadvantage is the long treatment time caused by the smallness of the therapeutic volume by a single exposure. To improve the efficiency and shorten the treatment time, we are focusing attention on utilizing cavitation bubbles. The generated microbubbles can convert the acoustic energy into heat with a high efficiency. In this study, using the class D amplifiers, which we have developed, to drive the array transducer, we demonstrate a new method to coagulate a large volume by a single HIFU exposure through generating cavitation bubbles distributing in a large volume and vibrating all of them. As a result, the coagulated volume by the proposed method was 1.71 times as large as that of the conventional method.

  6. Use of volume-targeted non-invasive bilevel positive airway pressure ventilation in a patient with amyotrophic lateral sclerosis*,**

    PubMed Central

    Diaz-Abad, Montserrat; Brown, John Edward

    2014-01-01

    Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease in which most patients die of respiratory failure. Although volume-targeted non-invasive bilevel positive airway pressure (BPAP) ventilation has been studied in patients with chronic respiratory failure of various etiologies, its use in ALS has not been reported. We present the case of a 66-year-old woman with ALS and respiratory failure treated with volume-targeted BPAP ventilation for 15 weeks. Weekly data downloads showed that disease progression was associated with increased respiratory muscle weakness, decreased spontaneous breathing, and increased use of non-invasive positive pressure ventilation, whereas tidal volume and minute ventilation remained relatively constant. PMID:25210968

  7. Phylogeny-driven target selection for large-scale genome-sequencing (and other) projects

    PubMed Central

    Göker, Markus; Klenk, Hans-Peter

    2013-01-01

    Despite the steadily decreasing costs of genome sequencing, prioritizing organisms for sequencing remains important in large-scale projects. Phylogeny-based selection is of interest to identify those organisms whose genomes can be expected to differ most from those that have already been sequenced. Here, we describe a method that infers a phylogenetic scoring independent of which set of organisms has previously been targeted, which is computationally simple and easy to apply in practice. The scoring itself, as well as pre- and post-processing of the data, is illustrated using two real-world examples in which the method has already been applied for selecting targets for genome sequencing. These projects are the JGI CSP Genomic Encyclopedia of Bacteria and Archaea phase I, targeting 1,000 type strains, and, on a smaller-scale, the phylogenomics of the Roseobacter clade. Potential artifacts of the method are discussed and compared to a selection approach based on the taxonomic classification. PMID:23991265

  8. Calibration target reconstruction for 3-D vision inspection system of large-scale engineering objects

    NASA Astrophysics Data System (ADS)

    Yin, Yongkai; Peng, Xiang; Guan, Yingjian; Liu, Xiaoli; Li, Ameng

    2010-11-01

    It is usually difficult to calibrate the 3-D vision inspection system that may be employed to measure the large-scale engineering objects. One of the challenges is how to in-situ build-up a large and precise calibration target. In this paper, we present a calibration target reconstruction strategy to solve such a problem. First, we choose one of the engineering objects to be inspected as a calibration target, on which we paste coded marks on the object surface. Next, we locate and decode marks to get homologous points. From multiple camera images, the fundamental matrix between adjacent images can be estimated, and then the essential matrix can be derived with priori known camera intrinsic parameters and decomposed to obtain camera extrinsic parameters. Finally, we are able to obtain the initial 3D coordinates with binocular stereo vision reconstruction, and then optimize them with the bundle adjustment by considering the lens distortions, leading to a high-precision calibration target. This reconstruction strategy has been applied to the inspection of an industrial project, from which the proposed method is successfully validated.

  9. TU-A-12A-06: Intra-Observer Variability in Delineation of Target Volumes in Breast Radiotherapy and Its Effect On Accuracy of Deformation Measurements

    SciTech Connect

    Juneja, P; Harris, E; Bonora, M; Evans, P

    2014-06-15

    Purpose: In breast radiotherapy, the target volume may change during treatment and need adaptation of the treatment plan. This is possible for both tumour bed (TB) and whole breast (WB) target volumes. Delineation of the target (to detect changes) is also subject to uncertainty due to intra- and inter-observer variability. This work measured the uncertainty, due to intraobserver variability, in the quantification of tissue deformation. Methods: Datasets consisting of paired prone and supine CT scans of three patients were used. Significant deformation in target volumes is expected between prone and supine patient positions. The selected cases had 1) no seroma, 2) some seroma, and 3) large seroma. The TB and WB were outlined on each dataset three times by one clinician. Delineation variability was defined as the standard deviations of the distances between observer outlines. For each target volume and each case, tissue deformation between prone and supine delineations was quantified using the Dice similarity coefficient (DSC) and the average surface distance (ASD). The uncertainty in the tissue deformation (due to delineation variability) was quantified by measuring the ranges of DSC and ASD using all combinations of pairs of outlines (9 pairs). Results: For the TB, the range of delineation variability was 0.44-1.16 mm. The deformation, DSC and ASD, (and uncertainty in measurement) of the TB between prone and supine position of the cases were: 1) 0.21 (0.17-0.28) and 12.4 mm (11.8-13 mm); 2) 0.54 (0.51-0.57) and 3.3 mm (3.1-3.5 mm); 3) 0.62 (0.61-0.64) and 4.9 mm (4.6-5.2 mm). WB deformation measurements were subject to less uncertainty due to delineation variability than TB deformation measurements. Conclusion: For the first time, the uncertainty, due to observer variability, in the measurement of the deformation of breast target volumes was investigated. Deformations in these ranges would be difficult to detect. This work was supported in part by Cancer Research

  10. Large-volume methacrylate monolith for plasmid purification. Process engineering approach to synthesis and application.

    PubMed

    Danquah, Michael K; Forde, Gareth M

    2008-04-25

    The extent of exothermicity associated with the construction of large-volume methacrylate monolithic columns has somewhat obstructed the realisation of large-scale rapid biomolecule purification especially for plasmid-based products which have proven to herald future trends in biotechnology. A novel synthesis technique via a heat expulsion mechanism was employed to prepare a 40 mL methacrylate monolith with a homogeneous radial pore structure along its thickness. Radial temperature gradient was recorded to be only 1.8 degrees C. Maximum radial temperature recorded at the centre of the monolith was 62.3 degrees C, which was only 2.3 degrees C higher than the actual polymerisation temperature. Pore characterisation of the monolithic polymer showed unimodal pore size distributions at different radial positions with an identical modal pore size of 400 nm. Chromatographic characterisation of the polymer after functionalisation with amino groups displayed a persistent dynamic binding capacity of 15.5 mg of plasmid DNA/mL. The maximum pressure drop recorded was only 0.12 MPa at a flow rate of 10 mL/min. The polymer demonstrated rapid separation ability by fractionating Escherichia coli DH5alpha-pUC19 clarified lysate in only 3 min after loading. The plasmid sample collected after the fast purification process was tested to be a homogeneous supercoiled plasmid with DNA electrophoresis and restriction analysis. PMID:18329651

  11. Major risk from rapid, large-volume landslides in Europe (EU Project RUNOUT)

    NASA Astrophysics Data System (ADS)

    Kilburn, Christopher R. J.; Pasuto, Alessandro

    2003-08-01

    Project RUNOUT has investigated methods for reducing the risk from large-volume landslides in Europe, especially those involving rapid rates of emplacement. Using field data from five test sites (Bad Goisern and Köfels in Austria, Tessina and Vajont in Italy, and the Barranco de Tirajana in Gran Canaria, Spain), the studies have developed (1) techniques for applying geomorphological investigations and optical remote sensing to map landslides and their evolution; (2) analytical, numerical, and cellular automata models for the emplacement of sturzstroms and debris flows; (3) a brittle-failure model for forecasting catastrophic slope failure; (4) new strategies for integrating large-area Global Positioning System (GPS) arrays with local geodetic monitoring networks; (5) methods for raising public awareness of landslide hazards; and (6) Geographic Information System (GIS)-based databases for the test areas. The results highlight the importance of multidisciplinary studies of landslide hazards, combining subjects as diverse as geology and geomorphology, remote sensing, geodesy, fluid dynamics, and social profiling. They have also identified key goals for an improved understanding of the physical processes that govern landslide collapse and runout, as well as for designing strategies for raising public awareness of landslide hazards and for implementing appropriate land management policies for reducing landslide risk.

  12. Large intestine-targeted, nanoparticle-releasing oral vaccine to control genitorectal viral infection.

    PubMed

    Zhu, Qing; Talton, James; Zhang, Guofeng; Cunningham, Tshaka; Wang, Zijian; Waters, Robert C; Kirk, James; Eppler, Bärbel; Klinman, Dennis M; Sui, Yongjun; Gagnon, Susan; Belyakov, Igor M; Mumper, Russell J; Berzofsky, Jay A

    2012-08-01

    Both rectal and vaginal mucosal surfaces serve as transmission routes for pathogenic microorganisms. Vaccination through large intestinal mucosa, previously proven protective for both of these mucosal sites in animal studies, can be achieved successfully by direct intracolorectal (i.c.r.) administration, but this route is clinically impractical. Oral vaccine delivery seems preferable but runs the risk of the vaccine's destruction in the upper gastrointestinal tract. Therefore, we designed a large intestine-targeted oral delivery with pH-dependent microparticles containing vaccine nanoparticles, which induced colorectal immunity in mice comparably to colorectal vaccination and protected against rectal and vaginal viral challenge. Conversely, vaccine targeted to the small intestine induced only small intestinal immunity and provided no rectal or vaginal protection, demonstrating functional compartmentalization within the gut mucosal immune system. Therefore, using this oral vaccine delivery system to target the large intestine, but not the small intestine, may represent a feasible new strategy for immune protection of rectal and vaginal mucosa. PMID:22797811

  13. Sequential transcription factor targeting for diffuse large B-cell lymphomas

    PubMed Central

    Cerchietti, Leandro C; Polo, Jose M; Da Silva, Gustavo F; Farinha, Pedro; Shaknovich, Rita; Gascoyne, Randy D; Dowdy, Steven F; Melnick, Ari

    2009-01-01

    Transcription factors play a central role in malignant transformation by activating or repressing waves of downstream target genes. Therapeutic targeting of transcription factors can reprogram cancer cells to lose their advantages in growth and survival. The BCL6 transcriptional repressor plays a central role in the pathogenesis of diffuse large B-cell lymphomas (DLBCLs) and controls downstream checkpoints including the p53 tumor suppressor gene. We report that a specific inhibitor of BCL6 called BPI can trigger a p53 response in DLBCL cells. This was partially due to induction of p53 activity and partially due to relief of direct repression by BCL6 of p53 target genes. BPI could thus induce a p53-like response even in the presence of mutant p53. Moreover, sequential BCL6 peptide inhibitors followed by p53 peptide or small molecule activators provided a more powerful anti-lymphoma effect than either treatment alone by maximally restoring p53 target gene expression. Therefore, tandem targeting of the overlapping BCL6 and p53 transcriptional programs can correct aberrant survival pathways in DLBCL and might provide an effective therapeutic approach to lymphoma therapy. PMID:18451163

  14. The oligocene Lund Tuff, Great Basin, USA: A very large volume monotonous intermediate

    USGS Publications Warehouse

    Maughan, L.L.; Christiansen, E.H.; Best, M.G.; Gromme, C.S.; Deino, A.L.; Tingey, D.G.

    2002-01-01

    Unusual monotonous intermediate ignimbrites consist of phenocryst-rich dacite that occurs as very large volume (> 1000 km3) deposits that lack systematic compositional zonation, comagmatic rhyolite precursors, and underlying plinian beds. They are distinct from countless, usually smaller volume, zoned rhyolite-dacite-andesite deposits that are conventionally believed to have erupted from magma chambers in which thermal and compositional gradients were established because of sidewall crystallization and associated convective fractionation. Despite their great volume, or because of it, monotonous intermediates have received little attention. Documentation of the stratigraphy, composition, and geologic setting of the Lund Tuff - one of four monotonous intermediate tuffs in the middle-Tertiary Great Basin ignimbrite province - provides insight into its unusual origin and, by implication, the origin of other similar monotonous intermediates. The Lund Tuff is a single cooling unit with normal magnetic polarity whose volume likely exceeded 3000 km3. It was emplaced 29.02 ?? 0.04 Ma in and around the coeval White Rock caldera which has an unextended north-south diameter of about 50 km. The tuff is monotonous in that its phenocryst assemblage is virtually uniform throughout the deposit: plagioclase > quartz ??? hornblende > biotite > Fe-Ti oxides ??? sanidine > titanite, zircon, and apatite. However, ratios of phenocrysts vary by as much as an order of magnitude in a manner consistent with progressive crystallization in the pre-eruption chamber. A significant range in whole-rock chemical composition (e.g., 63-71 wt% SiO2) is poorly correlated with phenocryst abundance. These compositional attributes cannot have been caused wholly by winnowing of glass from phenocrysts during eruption, as has been suggested for the monotonous intermediate Fish Canyon Tuff. Pumice fragments are also crystal-rich, and chemically and mineralogically indistinguishable from bulk tuff. We

  15. Beautiful small: Misleading large randomized controlled trials? The example of colloids for volume resuscitation.

    PubMed

    Wiedermann, Christian J; Wiedermann, Wolfgang

    2015-01-01

    In anesthesia and intensive care, treatment benefits that were claimed on the basis of small or modest-sized trials have repeatedly failed to be confirmed in large randomized controlled trials. A well-designed small trial in a homogeneous patient population with high event rates could yield conclusive results; however, patient populations in anesthesia and intensive care are typically heterogeneous because of comorbidities. The size of the anticipated effects of therapeutic interventions is generally low in relation to relevant endpoints. For regulatory purposes, trials are required to demonstrate efficacy in clinically important endpoints, and therefore must be large because clinically important study endpoints such as death, sepsis, or pneumonia are dichotomous and infrequently occur. The rarer endpoint events occur in the study population; that is, the lower the signal-to-noise ratio, the larger the trials must be to prevent random events from being overemphasized. In addition to trial design, sample size determination on the basis of event rates, clinically meaningful risk ratio reductions and actual patient numbers studied are among the most important characteristics when interpreting study results. Trial size is a critical determinant of generalizability of study results to larger or general patient populations. Typical characteristics of small single-center studies responsible for their known fragility include low variability of outcome measures for surrogate parameters and selective publication and reporting. For anesthesiology and intensive care medicine, findings in volume resuscitation research on intravenous infusion of colloids exemplify this, since both the safety of albumin infusion and the adverse effects of the artificial colloid hydroxyethyl starch have been confirmed only in large-sized trials. PMID:26330723

  16. Beautiful small: Misleading large randomized controlled trials? The example of colloids for volume resuscitation

    PubMed Central

    Wiedermann, Christian J; Wiedermann, Wolfgang

    2015-01-01

    In anesthesia and intensive care, treatment benefits that were claimed on the basis of small or modest-sized trials have repeatedly failed to be confirmed in large randomized controlled trials. A well-designed small trial in a homogeneous patient population with high event rates could yield conclusive results; however, patient populations in anesthesia and intensive care are typically heterogeneous because of comorbidities. The size of the anticipated effects of therapeutic interventions is generally low in relation to relevant endpoints. For regulatory purposes, trials are required to demonstrate efficacy in clinically important endpoints, and therefore must be large because clinically important study endpoints such as death, sepsis, or pneumonia are dichotomous and infrequently occur. The rarer endpoint events occur in the study population; that is, the lower the signal-to-noise ratio, the larger the trials must be to prevent random events from being overemphasized. In addition to trial design, sample size determination on the basis of event rates, clinically meaningful risk ratio reductions and actual patient numbers studied are among the most important characteristics when interpreting study results. Trial size is a critical determinant of generalizability of study results to larger or general patient populations. Typical characteristics of small single-center studies responsible for their known fragility include low variability of outcome measures for surrogate parameters and selective publication and reporting. For anesthesiology and intensive care medicine, findings in volume resuscitation research on intravenous infusion of colloids exemplify this, since both the safety of albumin infusion and the adverse effects of the artificial colloid hydroxyethyl starch have been confirmed only in large-sized trials. PMID:26330723

  17. Analytical and Experimental Investigation of Mixing in Large Passive Containment Volumes

    SciTech Connect

    Per F. Peterson

    2002-10-17

    This final report details results from the past three years of the three-year UC Berkeley NEER investigation of mixing phenomena in large-scale passive reactor containments. We have completed all of our three-year deliverables specified in our proposal, as summarized for each deliverable in the body of this report, except for the experiments of steam condensation in the presence of noncondensable gas. We have particularly exiting results from the experiments studying the mixing in large insulated containment with a vertical cooling plate. These experiments now have shown why augmentation has been observed in wall-condensation experiments due to the momentum of the steam break-flow entering large volumes. More importantly, we also have shown that the forced-jet augmentation can be predicted using relatively simple correlations, and that it is independent of the break diameter and depends only on the break flow orientation, location, and momentum. This suggests that we will now be able to take credit for this augmentation in reactor safety analysis, improving safety margins for containment structures. We have finished the version 1 of 1-D Lagrangian flow and heat transfer code BMIX++. This version has ability to solve many complex stratified problems, such as multi-components problems, multi-enclosures problems (two enclosures connected by one connection for the current version), incompressible and compressible problems, multi jets, plumes, sinks in one enclosure problems, problems with wall conduction, and the combinations of the above problems. We believe the BMIX++ code is a very powerful computation tool to study stratified enclosures mixing problems.

  18. Deflagration to detonation transition on large confined volume of lean hydrogen-air mixtures

    SciTech Connect

    Dorofeev, S.B.; Sidorov, V.P.; Dvoinishnikov, A.E.; Breitung, W.

    1996-01-01

    The results of large-scale experiments on turbulent flame propagation and transition to detonation in a confined volume of lean hydrogen-air mixtures are presented. The experiments were in a strong concrete enclosure of 480 m{sup 3}, and of 69.9 m length. The experimental volume consists first of a channel (34.6 m length, 2.3 m height, 2.5 m width) with or without obstacles, a canyon (10.55 {times} 6.3 {times} 2.5 m), and a final channel. Ignition was with a weak electric spark at the beginning of the first channel. The effect of hydrogen concentration (9.8%--14% vol.) on turbulent flame propagation and transition to detonation was studied. The obstacle configuration in the first channel (blockage ratio 0.3, 0.6, and no obstacles), exit cross section to the canyon (1.4, 2, and 5.6 m{sup 2}), and vent area at the end (0, 2.5, and 4 m{sup 2}) were varied in the tests. Details of turbulent flame propagation, of pressure field, and of detonation onset are presented. A minimum of 12.5% of hydrogen was found to be necessary for transition to detonation. This is a much less sensitive mixture than those in which the onset of spontaneous detonation has previously been observed (minimum of 15% of hydrogen in air). The effect of scale on the onset conditions for spontaneous detonation is discussed. The characteristic geometrical size of the mixture for transition to detonation is shown to be strongly related to the mixture sensitivity.

  19. Defining the Clinical Target Volume for Bladder Cancer Radiotherapy Treatment Planning

    SciTech Connect

    Jenkins, Peter; Anjarwalla, Salim; Gilbert, Hugh; Kinder, Richard

    2009-12-01

    Purpose: There are currently no data for the expansion margin required to define the clinical target volume (CTV) around bladder tumors. This information is particularly relevant when perivesical soft tissue changes are seen on the planning scan. While this appearance may reflect extravesical extension (EVE), it may also be an artifact of previous transurethral resection (TUR). Methods and Materials: Eighty patients with muscle-invasive bladder cancer who had undergone radical cystectomy were studied. All patients underwent preoperative TUR and staging computed tomography (CT) scans. The presence and extent of tumor growth beyond the outer bladder wall was measured radiologically and histopathologically. Results: Forty one (51%) patients had histologically confirmed tumor extension into perivesical fat. The median and mean extensions beyond the outer bladder wall were 1.7 and 3.1 mm, respectively. Thirty five (44%) patients had EVE, as seen on CT scans. The sensitivity and specificity of CT scans for EVE were 56% and 79%, respectively. False-positive results were infrequent and not affected by either the timing or the amount of tissue resected at TUR. CT scans consistently tended to overestimate the extent of EVE. Tumor size and the presence of either lymphovascular invasion or squamoid differentiation predict a greater extent of EVE. Conclusions: In patients with radiological evidence of extravesical disease, the CTV should comprise the outer bladder wall plus a 10-mm margin. In patients with no evidence of extravesical disease on CT scans, the CTV should be restricted to the outer bladder wall plus a 6-mm margin. These recommendations would encompass microscopic disease extension in 90% of cases.

  20. Definition and delineation of the clinical target volume for rectal cancer

    SciTech Connect

    Roels, Sarah; Duthoy, Wim; Haustermans, Karin . E-mail: Karin.Haustermans@uzleuven.be; Penninckx, Freddy; Vandecaveye, Vincent; Boterberg, Tom; Neve, Wilfried de

    2006-07-15

    Purpose: Optimization of radiation techniques to maximize local tumor control and to minimize small bowel toxicity in locally advanced rectal cancer requires proper definition and delineation guidelines for the clinical target volume (CTV). The purpose of this investigation was to analyze reported data on the predominant locations and frequency of local recurrences and lymph node involvement in rectal cancer, to propose a definition of the CTV for rectal cancer and guidelines for its delineation. Methods and Materials: Seven reports were analyzed to assess the incidence and predominant location of local recurrences in rectal cancer. The distribution of lymphatic spread was analyzed in another 10 reports to record the relative frequency and location of metastatic lymph nodes in rectal cancer, according to the stage and level of the primary tumor. Results: The mesorectal, posterior, and inferior pelvic subsites are most at risk for local recurrences, whereas lymphatic tumor spread occurs mainly in three directions: upward into the inferior mesenteric nodes; lateral into the internal iliac lymph nodes; and, in a few cases, downward into the external iliac and inguinal lymph nodes. The risk for recurrence or lymph node involvement is related to the stage and the level of the primary lesion. Conclusion: Based on a review of articles reporting on the incidence and predominant location of local recurrences and the distribution of lymphatic spread in rectal cancer, we defined guidelines for CTV delineation including the pelvic subsites and lymph node groups at risk for microscopic involvement. We propose to include the primary tumor, the mesorectal subsite, and the posterior pelvic subsite in the CTV in all patients. Moreover, the lateral lymph nodes are at high risk for microscopic involvement and should also be added in the CTV.

  1. In vivo experiments and numerical investigations on nanocryosurgical freezing of target tissues with large blood vessels.

    PubMed

    Sun, Zi-Qiao; Yang, Yang; Liu, Jing

    2012-02-01

    This study presented the first in vivo animal experiments of using nano-cryosurgical modality to completely freezing tumor tissues embedded with large blood vessels, which is a tough issue to tackle otherwise. Three-dimensional theoretical simulations were also performed on the complex freezing problems by considering flow and heat transfer of blood flow in large vessels. According to the experimental measurements and numerical predictions, injecting the nanoparticles with high thermal conductivity into the freezing target can significantly reduce the heating effect of blood vessel, shorten the freezing time, and enlarge the freezing range. Most importantly, the introduction of nanoparticles successfully overcomes the classical challenges in completely ablating the tumor region with large blood vessel and enhancing the freezing efficacy of cryosurgery. This investigation consolidates the practical and theoretical foundation for nano-cryosurgery which suggests a highly efficient freezing strategy for treating late stage tumor. PMID:22515090

  2. Targeting Large Kinase Active Site with Rigid, Bulky Octahedral Ruthenium Complexes

    SciTech Connect

    Maksimoska, Jasna; Feng, Li; Harms, Klaus; Yi, Chunling; Kissil, Joseph; Marmorstein, Ronen; Meggers, Eric

    2009-09-02

    A strategy for targeting protein kinases with large ATP-binding sites by using bulky and rigid octahedral ruthenium complexes as structural scaffolds is presented. A highly potent and selective GSK3 and Pim1 half-sandwich complex NP309 was successfully converted into a PAK1 inhibitor by making use of the large octahedral compounds {Lambda}-FL172 and {Lambda}-FL411 in which the cyclopentadienyl moiety of NP309 is replaced by a chloride and sterically demanding diimine ligands. A 1.65 {angstrom}cocrystal structure of PAK1 with {Lambda}-FL172 reveals how the large coordination sphere of the ruthenium complex matches the size of the active site and serves as a yardstick to discriminate between otherwise closely related binding sites.

  3. RTOG Sarcoma Radiation Oncologists Reach Consensus on Gross Tumor Volume and Clinical Target Volume on Computed Tomographic Images for Preoperative Radiotherapy of Primary Soft Tissue Sarcoma of Extremity in Radiation Therapy Oncology Group Studies

    SciTech Connect

    Wang Dian; Bosch, Walter; Roberge, David; Finkelstein, Steven E.; Petersen, Ivy; Haddock, Michael; Chen, Yen-Lin E.; Saito, Naoyuki G.; Kirsch, David G.; Hitchcock, Ying J.; Wolfson, Aaron H.; DeLaney, Thomas F.

    2011-11-15

    Objective: To develop a Radiation Therapy Oncology Group (RTOG) atlas delineating gross tumor volume (GTV) and clinical target volume (CTV) to be used for preoperative radiotherapy of primary extremity soft tissue sarcoma (STS). Methods and Materials: A consensus meeting was held during the RTOG meeting in January 2010 to reach agreement about GTV and CTV delineation on computed tomography (CT) images for preoperative radiotherapy of high-grade large extremity STS. Data were presented to address the local extension of STS. Extensive discussion ensued to develop optimal criteria for GTV and CTV delineation on CT images. Results: A consensus was reached on appropriate CT-based GTV and CTV. The GTV is gross tumor defined by T1 contrast-enhanced magnetic resonance images. Fusion of magnetic resonance and images is recommended to delineate the GTV. The CTV for high-grade large STS typically includes the GTV plus 3-cm margins in the longitudinal directions. If this causes the field to extend beyond the compartment, the field can be shortened to include the end of a compartment. The radial margin from the lesion should be 1.5 cm, including any portion of the tumor not confined by an intact fascial barrier, bone, or skin surface. Conclusion: The consensus on GTV and CTV for preoperative radiotherapy of high-grade large extremity STS is available as web-based images and in a descriptive format through the RTOG. This is expected to improve target volume consistency and allow for rigorous evaluation of the benefits and risks of such treatment.

  4. Implementation of a target volume design function for intrafractional range variation in a particle beam treatment planning system

    PubMed Central

    Inaniwa, T; Miki, K; Shirai, T; Noda, K

    2014-01-01

    Objective: Treatment planning for charged particle therapy in the thoracic and abdominal regions should take account of range uncertainty due to intrafractional motion. Here, we developed a design tool (4Dtool) for the target volume [field-specific target volume (FTV)], which accounts for this uncertainty using four-dimensional CT (4DCT). Methods: Target and normal tissue contours were input manually into a treatment planning system (TPS). These data were transferred to the 4Dtool via the picture archiving and communication system (PACS). Contours at the reference phase were propagated to other phases by deformable image registration. FTV was calculated using 4DCT on the 4Dtool. The TPS displays FTV contours using digital imaging and communications in medicine files imported from the PACS. These treatment parameters on the CT image at the reference phase were then used for dose calculation on the TPS. The tool was tested in single clinical case randomly selected from patients treated at our centre for lung cancer. Results: In this clinical case, calculation of dose distribution with the 4Dtool resulted in the successful delivery of carbon-ion beam at the reference phase of 95% of the prescribed dose to the clinical target volume (CTV). Application to the other phases also provided sufficient dose to the CTV. Conclusion: The 4Dtool software allows the design of the target volume with consideration to intrafractional range variation and is now in routine clinical use at our institution. Advances in knowledge: Our alternative technique represents a practical approach to four-dimensional treatment planning within the current state of charged particle therapy. PMID:25168286

  5. Relationship Between Pelvic Organ-at-Risk Dose and Clinical Target Volume in Postprostatectomy Patients Receiving Intensity-Modulated Radiotherapy

    SciTech Connect

    Stanic, Sinisa; Mathai, Mathew; Cui Jing; Purdy, James A.; Valicenti, Richard K.

    2012-04-01

    Purpose: To investigate dose-volume consequences of inclusion of the seminal vesicle (SV) bed in the clinical target volume (CTV) for the rectum and bladder using biological response indices in postprostatectomy patients receiving intensity-modulated radiotherapy (IMRT). Methods and Materials: We studied 10 consecutive patients who underwent prostatectomy for prostate cancer and subsequently received adjuvant or salvage RT to the prostate fossa. The CTV to planning target volume (PTV) expansion was 7 mm, except posterior expansion, which was 5 mm. Two IMRT plans were generated for each patient, including either the prostate fossa alone or the prostate fossa with the SV bed, but identical in all other aspects. Prescription dose was 68.4 Gy in 1.8-Gy fractions prescribed to {>=}95% PTV. Results: With inclusion of the SV bed in the treatment volume, PTV increased and correlated with PTV-bladder and PTV-rectum volume overlap (Spearman {rho} 0.91 and 0.86, respectively; p < 0.05). As a result, the dose delivered to the bladder and rectum was higher (p < 0.05): mean bladder dose increased from 11.3 {+-} 3.5 Gy to 21.2 {+-} 6.6 Gy, whereas mean rectal dose increased from 25.8 {+-} 5.5 Gy to 32.3 {+-} 5.5 Gy. Bladder and rectal equivalent uniform dose correlated with mean bladder and rectal dose. Inclusion of the SV bed in the treatment volume increased rectal normal tissue complication probability from 2.4% to 4.8% (p < 0.01). Conclusions: Inclusion of the SV bed in the CTV in postprostatectomy patients receiving IMRT increases bladder and rectal dose, as well as rectal normal tissue complication probability. The magnitude of PTV-bladder and PTV-rectal volume overlap and subsequent bladder and rectum dose increase will be higher if larger PTV expansion margins are used.

  6. Large-angle production of charged pions with incident pion beams on nuclear targets

    SciTech Connect

    Apollonio, M.; Chimenti, P.; Giannini, G.; Artamonov, A.; Giani, S.; Gilardoni, S.; Gorbunov, P.; Grant, A.; Grossheim, A.; Ivanchenko, A.; Ivanchenko, V.; Kayis-Topaksu, A.; Panman, J.; Papadopoulos, I.; Tcherniaev, E.; Tsukerman, I.; Wiebusch, C.; Zucchelli, P.; Bagulya, A.; Grichine, V.

    2009-12-15

    Measurements of the double-differential {pi}{sup {+-}} production cross section in the range of momentum 100{<=}p{<=}800 MeV/c and angle 0.35{<=}{theta}{<=}2.15 rad using {pi}{sup {+-}} beams incident on beryllium, aluminum, carbon, copper, tin, tantalum, and lead targets are presented. The data were taken with the large-acceptance hadron production (HARP) detector in the T9 beam line of the CERN Proton Synchrotron. The secondary pions were produced by beams in a momentum range from 3 to 12.9GeV/c hitting a solid target with a thickness of 5% of a nuclear interaction length. The tracking and identification of the produced particles was performed using a small-radius cylindrical time projection chamber placed inside a solenoidal magnet. Incident particles were identified by an elaborate system of beam detectors. Results are obtained for the double-differential cross sections d{sup 2}{sigma}/dp d{theta} at six incident-beam momenta. Data at 3,5,8, and 12GeV/c are available for all targets, while additional data at 8.9 and 12.9GeV/c were taken in positive particle beams on Be and Al targets, respectively. The measurements are compared with several generators of GEANT4 and the MARS Monte Carlo simulation.

  7. Large-angle production of charged pions with incident pion beams on nuclear targets

    NASA Astrophysics Data System (ADS)

    Apollonio, M.; Artamonov, A.; Bagulya, A.; Barr, G.; Blondel, A.; Bobisut, F.; Bogomilov, M.; Bonesini, M.; Booth, C.; Borghi, S.; Bunyatov, S.; Burguet-Castell, J.; Catanesi, M. G.; Cervera-Villanueva, A.; Chimenti, P.; Coney, L.; Capua, E. Di; Dore, U.; Dumarchez, J.; Edgecock, R.; Ellis, M.; Ferri, F.; Gastaldi, U.; Giani, S.; Giannini, G.; Gibin, D.; Gilardoni, S.; Gorbunov, P.; Gößling, C.; Gómez-Cadenas, J. J.; Grant, A.; Graulich, J. S.; Grégoire, G.; Grichine, V.; Grossheim, A.; Guglielmi, A.; Howlett, L.; Ivanchenko, A.; Ivanchenko, V.; Kayis-Topaksu, A.; Kirsanov, M.; Kolev, D.; Krasnoperov, A.; Martín-Albo, J.; Meurer, C.; Mezzetto, M.; Mills, G. B.; Morone, M. C.; Novella, P.; Orestano, D.; Palladino, V.; Panman, J.; Papadopoulos, I.; Pastore, F.; Piperov, S.; Polukhina, N.; Popov, B.; Prior, G.; Radicioni, E.; Schmitz, D.; Schroeter, R.; Skoro, G.; Sorel, M.; Tcherniaev, E.; Temnikov, P.; Tereschenko, V.; Tonazzo, A.; Tortora, L.; Tsenov, R.; Tsukerman, I.; Vidal-Sitjes, G.; Wiebusch, C.; Zucchelli, P.

    2009-12-01

    Measurements of the double-differential π± production cross section in the range of momentum 100⩽p⩽800 MeV/c and angle 0.35⩽θ⩽2.15 rad using π± beams incident on beryllium, aluminum, carbon, copper, tin, tantalum, and lead targets are presented. The data were taken with the large-acceptance hadron production (HARP) detector in the T9 beam line of the CERN Proton Synchrotron. The secondary pions were produced by beams in a momentum range from 3 to 12.9GeV/c hitting a solid target with a thickness of 5% of a nuclear interaction length. The tracking and identification of the produced particles was performed using a small-radius cylindrical time projection chamber placed inside a solenoidal magnet. Incident particles were identified by an elaborate system of beam detectors. Results are obtained for the double-differential cross sections d2σ/dpdθ at six incident-beam momenta. Data at 3,5,8, and 12GeV/c are available for all targets, while additional data at 8.9 and 12.9GeV/c were taken in positive particle beams on Be and Al targets, respectively. The measurements are compared with several generators of GEANT4 and the MARS Monte Carlo simulation.

  8. Annealing as grown large volume CZT single crystals increased spectral resolution

    SciTech Connect

    Dr. Longxia Li

    2008-03-19

    The spectroscopic performance of current large-volume Cadmium 10% Zinc Telluride, Cd{sub 0.9}Zn{sub 0.1}Te, (CZT) detectors is impaired by cumulative effect of tellurium precipitates (secondary phases) presented in CZT single-crystal grown by low-pressure Bridgman techniques(1). This statistical effect may limit the energy resolution of large-volume CZT detectors (typically 2-5% at 662 keV for 12-mm thick devices). The stochastic nature of the interaction prevents the use of any electronic or digital charge correction techniques without a significant reduction in the detector efficiency. This volume constraint hampers the utility of CZT since the detectors are inefficient at detecting photons >1MeV and/or in low fluency situations. During the project, seven runs CZT ingots have been grown, in these ingots the indium dopant concentrations have been changed in the range between 0.5ppm to 6ppm. The I-R mapping imaging method has been employed to study the Te-precipitates. The Teprecipitates in as-grown CZT wafers, and after annealing wafers have been systematically studied by using I-R mapping system (home installed, resolution of 1.5 {micro}m). We employed our I-R standard annealing CZT (Zn=4%) procedure or two-steps annealing into radiation CZT (Zn=10%), we achieved the 'non'-Te precipitates (size < 1 {micro}m) CZT n+-type with resistivity > 10{sup 9-10} {Omega}-cm. We believe that the Te-precipitates are the p-type defects, its reducing number causes the CZT became n+-type, therefore we varied or reduced the indium dapant concentration during the growth and changed the Te-precipitates size and density by using different Cd-temperature and different annealing procedures. We have made the comparisons among Te-precipitates size, density and Indium dopant concentrations, and we found that the CZT with smaller size of Te-precipitates is suitable for radiation uses but non-Te precipitates is impossible to be used in the radiation detectors, because the CZT would became

  9. Detecting Boosted Dark Matter from the Sun with Large Volume Neutrino Detectors

    SciTech Connect

    Berger, Joshua; Cui, Yanou; Zhao, Yue; /Stanford U., ITP /Stanford U., Phys. Dept.

    2015-04-02

    We study novel scenarios where thermal dark matter (DM) can be efficiently captured in the Sun and annihilate into boosted dark matter. In models with semi-annihilating DM, where DM has a non-minimal stabilization symmetry, or in models with a multi-component DM sector, annihilations of DM can give rise to stable dark sector particles with moderate Lorentz boosts. We investigate both of these possibilities, presenting concrete models as proofs of concept. Both scenarios can yield viable thermal relic DM with masses O(1)-O(100) GeV. Taking advantage of the energetic proton recoils that arise when the boosted DM scatters off matter, we propose a detection strategy which uses large volume terrestrial detectors, such as those designed to detect neutrinos or proton decays. In particular, we propose a search for proton tracks pointing towards the Sun. We focus on signals at Cherenkov-radiation-based detectors such as Super-Kamiokande (SK) and its upgrade Hyper-Kamiokande (HK). We find that with spin-dependent scattering as the dominant DM-nucleus interaction at low energies, boosted DM can leave detectable signals at SK or HK, with sensitivity comparable to DM direct detection experiments while being consistent with current constraints. Our study provides a new search path for DM sectors with non-minimal structure.

  10. A Parallel, Finite-Volume Algorithm for Large-Eddy Simulation of Turbulent Flows

    NASA Technical Reports Server (NTRS)

    Bui, Trong T.

    1999-01-01

    A parallel, finite-volume algorithm has been developed for large-eddy simulation (LES) of compressible turbulent flows. This algorithm includes piecewise linear least-square reconstruction, trilinear finite-element interpolation, Roe flux-difference splitting, and second-order MacCormack time marching. Parallel implementation is done using the message-passing programming model. In this paper, the numerical algorithm is described. To validate the numerical method for turbulence simulation, LES of fully developed turbulent flow in a square duct is performed for a Reynolds number of 320 based on the average friction velocity and the hydraulic diameter of the duct. Direct numerical simulation (DNS) results are available for this test case, and the accuracy of this algorithm for turbulence simulations can be ascertained by comparing the LES solutions with the DNS results. The effects of grid resolution, upwind numerical dissipation, and subgrid-scale dissipation on the accuracy of the LES are examined. Comparison with DNS results shows that the standard Roe flux-difference splitting dissipation adversely affects the accuracy of the turbulence simulation. For accurate turbulence simulations, only 3-5 percent of the standard Roe flux-difference splitting dissipation is needed.

  11. A uniform laminar air plasma plume with large volume excited by an alternating current voltage

    NASA Astrophysics Data System (ADS)

    Li, Xuechen; Bao, Wenting; Chu, Jingdi; Zhang, Panpan; Jia, Pengying

    2015-12-01

    Using a plasma jet composed of two needle electrodes, a laminar plasma plume with large volume is generated in air through an alternating current voltage excitation. Based on high-speed photography, a train of filaments is observed to propagate periodically away from their birth place along the gas flow. The laminar plume is in fact a temporal superposition of the arched filament train. The filament consists of a negative glow near the real time cathode, a positive column near the real time anode, and a Faraday dark space between them. It has been found that the propagation velocity of the filament increases with increasing the gas flow rate. Furthermore, the filament lifetime tends to follow a normal distribution (Gaussian distribution). The most probable lifetime decreases with increasing the gas flow rate or decreasing the averaged peak voltage. Results also indicate that the real time peak current decreases and the real time peak voltage increases with the propagation of the filament along the gas flow. The voltage-current curve indicates that, in every discharge cycle, the filament evolves from a Townsend discharge to a glow one and then the discharge quenches. Characteristic regions including a negative glow, a Faraday dark space, and a positive column can be discerned from the discharge filament. Furthermore, the plasma parameters such as the electron density, the vibrational temperature and the gas temperature are investigated based on the optical spectrum emitted from the laminar plume.

  12. A study on high strength concrete prepared with large volumes of low calcium fly ash

    SciTech Connect

    Poon, C.S.; Lam, L.; Wong, Y.L.

    2000-03-01

    This paper presents the results of a laboratory study on high strength concrete prepared with large volumes of low calcium fly ash. The parameters studied included compressive strength, heat of hydration, chloride diffusivity, degree of hydration, and pore structures of fly ash/cement concrete and corresponding pastes. The experimental results showed that concrete with a 28-day compressive strength of 80 MPA could be obtained with a water-to-binder (w/b) ratio of 0.24, with a fly ash content of 45%. Such concrete has lower heat of hydration and chloride diffusivity than the equivalent plain cement concrete or concrete prepared with lower fly ash contents. The test results showed that at lower w/b ratios, the contribution to strength by the fly ash was higher than in the mixes prepared with higher w/b ratios. The study also quantified the reaction rates of cement and fly ash in the cementitious materials. The results demonstrated the dual effects of fly ash in concrete: (1) act as a micro-aggregate and (2) being a pozzolana. It was also noted that the strength contribution of fly ash in concrete was better than in the equivalent cement/fly ash pastes suggesting the fly ash had improved the interfacial bond between the past and the aggregates in the concrete. Such an improvement was also reflected in the results of the mercury intrusion porosimetry (MIP) test.

  13. Detecting boosted dark matter from the Sun with large volume neutrino detectors

    SciTech Connect

    Berger, Joshua; Cui, Yanou; Zhao, Yue E-mail: ycui@perimeterinstitute.ca

    2015-02-01

    We study novel scenarios where thermal dark matter (DM) can be efficiently captured in the Sun and annihilate into boosted dark matter. In models with semi-annihilating DM, where DM has a non-minimal stabilization symmetry, or in models with a multi-component DM sector, annihilations of DM can give rise to stable dark sector particles with moderate Lorentz boosts. We investigate both of these possibilities, presenting concrete models as proofs of concept. Both scenarios can yield viable thermal relic DM with masses O(1)-O(100) GeV. Taking advantage of the energetic proton recoils that arise when the boosted DM scatters off matter, we propose a detection strategy which uses large volume terrestrial detectors, such as those designed to detect neutrinos or proton decays. In particular, we propose a search for proton tracks pointing towards the Sun. We focus on signals at Cherenkov-radiation-based detectors such as Super-Kamiokande (SK) and its upgrade Hyper-Kamiokande (HK). We find that with spin-dependent scattering as the dominant DM-nucleus interaction at low energies, boosted DM can leave detectable signals at SK or HK, with sensitivity comparable to DM direct detection experiments while being consistent with current constraints. Our study provides a new search path for DM sectors with non-minimal structure.

  14. Development testing of large volume water sprays for warm fog dispersal

    NASA Technical Reports Server (NTRS)

    Keller, V. W.; Anderson, B. J.; Burns, R. A.; Lala, G. G.; Meyer, M. B.; Beard, K. V.

    1986-01-01

    A new brute-force method of warm fog dispersal is described. The method uses large volume recycled water sprays to create curtains of falling drops through which the fog is processed by the ambient wind and spray induced air flow. Fog droplets are removed by coalescence/rainout. The efficiency of the technique depends upon the drop size spectra in the spray, the height to which the spray can be projected, the efficiency with which fog laden air is processed through the curtain of spray, and the rate at which new fog may be formed due to temperature differences between the air and spray water. Results of a field test program, implemented to develop the data base necessary to assess the proposed method, are presented. Analytical calculations based upon the field test results indicate that this proposed method of warm fog dispersal is feasible. Even more convincingly, the technique was successfully demonstrated in the one natural fog event which occurred during the test program. Energy requirements for this technique are an order of magnitude less than those to operate a thermokinetic system. An important side benefit is the considerable emergency fire extinguishing capability it provides along the runway.

  15. Configuration Analysis of the ERS Points in Large-Volume Metrology System

    PubMed Central

    Jin, Zhangjun; Yu, Cijun; Li, Jiangxiong; Ke, Yinglin

    2015-01-01

    In aircraft assembly, multiple laser trackers are used simultaneously to measure large-scale aircraft components. To combine the independent measurements, the transformation matrices between the laser trackers’ coordinate systems and the assembly coordinate system are calculated, by measuring the enhanced referring system (ERS) points. This article aims to understand the influence of the configuration of the ERS points that affect the transformation matrix errors, and then optimize the deployment of the ERS points to reduce the transformation matrix errors. To optimize the deployment of the ERS points, an explicit model is derived to estimate the transformation matrix errors. The estimation model is verified by the experiment implemented in the factory floor. Based on the proposed model, a group of sensitivity coefficients are derived to evaluate the quality of the configuration of the ERS points, and then several typical configurations of the ERS points are analyzed in detail with the sensitivity coefficients. Finally general guidance is established to instruct the deployment of the ERS points in the aspects of the layout, the volume size and the number of the ERS points, as well as the position and orientation of the assembly coordinate system. PMID:26402685

  16. Performance of the Goulden large volume sampler for acidic compounds in natural waters

    SciTech Connect

    Headley, J.; Dickson, L.; Swyngedouw, C.; Crosley, D.; Whitley, G.

    1995-12-31

    The Goulden large volume sampler (LVX) has received extensive use for monitoring and surveillance surveys of natural waters impacted by pulp and paper mills, and agricultural run-off water. Despite this use, there is a lack of performance criteria for acidic contaminants, There are concerns about whether this sampler which was originally developed for extractions of OCs, PCBs and PAHs, was suitable for sampling polar acidic compounds. Performance tests conducted in this work, indicated that with the exception of 4-bromophenol and dichlorophenylacetic acid, surrogate compounds were recovered from pH 2 adjusted samples (20 1) at approximately 80 {+-} 15--35% recovery. Although these recoveries were comparable to values attainable for neutral pesticides, the standard deviations were up to four times greater than values reported for neutral compounds, for concentrations of analytes at low ppt levels. Specific performance criteria (percent recoveries where the number of determinations are given in parenthesis) observed for the proposed surrogates heptadecanoic acid, dichlorophenylacetic acid, 4-bromophenol, o-methylpodocarpic acid and 2,4,6-tribromophenol were: 86.6(19) {+-} 26.8; 46.1(18) {+-} 14.5; 31.6(19) {+-} 24.1; 78.4(18) {+-} 14.7; and95.2(18) {+-} 33.6 respectively. These values can be used to provide guidelines for acceptable surrogate recoveries, and validation of extractions of acidic polar compounds.

  17. Twinning in vapour-grown, large volume Cd1-xZnxTe crystals

    NASA Astrophysics Data System (ADS)

    Tanner, B. K.; Mullins, J. T.; Pym, A. T. G.; Maneuski, D.

    2016-08-01

    The onset of twinning from (2 bar 1 bar 1 bar) to (1 bar 3 bar 3 bar) in large volume Cd1-xZnxTe crystals, grown by vapour transport on (2 bar 1 bar 1 bar) , often referred to as (211)B, oriented GaAs seeds, has been investigated using X-ray diffraction imaging (X-ray topography). Twinning is not associated with strains at the GaAs/CdTe interface as the initial growth was always in (2 bar 1 bar 1 bar) orientation. Nor is twinning related to lattice strains associated with injection of Zn subsequent to initial nucleation and growth of pure CdTe as in both cases twinning occurred after growth of several mm length of Cd1-xZnxTe. While in both cases examined, there was a region of disturbed growth prior to the twinning transition, in neither crystal does this strain appear to have nucleated the twinning process. In both cases, un-twinned material remained after twinning was observed, the scale of the resulting twin boundaries being sub-micron. Simultaneous twinning across the whole sample surface was observed in one sample, whereas in the other, twinning was nucleated at different points and times in the growth.

  18. Analysis of Nucleosides in Municipal Wastewater by Large-Volume Liquid Chromatography Tandem Mass Spectrometry

    PubMed Central

    Brewer, Alex J.; Lunte, Craig

    2015-01-01

    Nucleosides are components of both DNA and RNA, and contain either a ribose (RNA) or 2deoxyribose (DNA) sugar and a purine or pyrimidine base. In addition to DNA and RNA turnover, modified nucleosides found in urine have been correlated to a diminished health status associated with AIDS, cancers, oxidative stress and age. Nucleosides found in municipal wastewater influent are potentially useful markers of community health status, and as of now, remain uninvestigated. A method was developed to quantify nucleosides in municipal wastewater using large-volume injection, liquid chromatography, and mass spectrometry. Method accuracy ranged from 92 to 139% when quantified by using isotopically labeled internal standards. Precision ranged from 6.1 to 19% of the relative standard deviation. The method’s utility was demonstrated by the analysis of twenty-four hour composite wastewater influent samples that were collected over a week to investigate community nucleoside excretion. Nucleosides originating from RNA were more abundant that DNA over the study period, with total loads of nucleosides ranging from 2 to 25 kg/day. Given this relatively high amount of nucleosides found over the study period they present an attractive analyte for the investigation of community health. PMID:26322136

  19. Spectroscopic properties of large-volume virtual Frisch-grid CdMnTe detectors

    NASA Astrophysics Data System (ADS)

    Kim, K. H.; Park, Chansun; Kim, Pilsu; Cho, Shinhaeng; Lee, Jinseo; Hong, T. K.; Hossain, A.; Bolotnikov, A. E.; James, R. B.

    2015-06-01

    CdMnTe(CMT) is a promising alternative material for use as a room-temperature radiation detector. Frisch-grid detectors have a simple configuration and outstanding spectral performance compared with other single-carrier collection techniques. The energy resolution of large-volume virtual Frisch-grid CMT detectors was tested by using several isotopes such as 57Co, 22 Na, 133Ba, and 137Cs together or separately. Energy resolutions of 6.7% and 2.1% were obtained for 122-keV 57Co and 662-keV 137Cs gamma rays, respectively, without using any additional signal processing techniques. Also, a 12-mm-thick CMT detector detected the 511-keV and 1.277-MeV gamma peaks of 22Na with values of the full width at half maximum (FWHM) of 2.7% and 1.5%, respectively. In addition, multiple low- and high-energy gamma peaks of 133Ba were well separated. The mobilitylifetime product calculated from the shift of the 662-keV photo-peak vs. bias by using Hecht's equation was 7 × 10 -3 cm2/V. These results show the possibility of using CMT detectors in response to various requirements for gamma-ray detection at room-temperature.

  20. A large-volume microwave plasma source based on parallel rectangular waveguides at low pressures

    NASA Astrophysics Data System (ADS)

    Zhang, Qing; Zhang, Guixin; Wang, Shumin; Wang, Liming

    2011-02-01

    A large-volume microwave plasma with good stability, uniformity and high density is directly generated and sustained. A microwave cavity is assembled by upper and lower metal plates and two adjacently parallel rectangular waveguides with axial slots regularly positioned on their inner wide side. Microwave energy is coupled into the plasma chamber shaped by quartz glass to enclose the space of working gas at low pressures. The geometrical properties of the source and the existing modes of the electric field are determined and optimized by a numerical simulation without a plasma. The calculated field patterns are in agreement with the observed experimental results. Argon, helium, nitrogen and air are used to produce a plasma for pressures ranging from 1000 to 2000 Pa and microwave powers above 800 W. The electron density is measured with a Mach-Zehnder interferometer to be on the order of 1014 cm-3 and the electron temperature is obtained using atomic emission spectrometry to be in the range 2222-2264 K at a pressure of 2000 Pa at different microwave powers. It can be seen from the interferograms at different microwave powers that the distribution of the plasma electron density is stable and uniform.

  1. A new large-volume metal reference standard for radioactive waste management

    PubMed Central

    Tzika, F.; Hult, M.; Stroh, H.; Marissens, G.; Arnold, D.; Burda, O.; Kovář, P.; Suran, J.; Listkowska, A.; Tyminski, Z.

    2016-01-01

    A new large-volume metal reference standard has been developed. The intended use is for calibration of free-release radioactivity measurement systems and is made up of cast iron tubes placed inside a box of the size of a Euro-pallet (80 × 120 cm). The tubes contain certified activity concentrations of 60Co (0.290±0.006 Bq g−1) and 110mAg (3.05±0.09 Bq g−1) (reference date: 30 September 2013). They were produced using centrifugal casting from a smelt into which 60Co was first added and then one piece of neutron irradiated silver wire was progressively diluted. The iron castings were machined to the desirable dimensions. The final material consists of 12 iron tubes of 20 cm outer diameter, 17.6 cm inner diameter, 40 cm length/height and 245.9 kg total mass. This paper describes the reference standard and the process of determining the reference activity values. PMID:25977349

  2. Quantitative analysis of cytoskeletal reorganization during epithelial tissue sealing by large-volume electron tomography.

    PubMed

    Eltsov, Mikhail; Dubé, Nadia; Yu, Zhou; Pasakarnis, Laurynas; Haselmann-Weiss, Uta; Brunner, Damian; Frangakis, Achilleas S

    2015-05-01

    The closure of epidermal openings is an essential biological process that causes major developmental problems such as spina bifida in humans if it goes awry. At present, the mechanism of closure remains elusive. Therefore, we reconstructed a model closure event, dorsal closure in fly embryos, by large-volume correlative electron tomography. We present a comprehensive, quantitative analysis of the cytoskeletal reorganization, enabling separated epidermal cells to seal the epithelium. After establishing contact through actin-driven exploratory filopodia, cells use a single lamella to generate 'roof tile'-like overlaps. These shorten to produce the force, 'zipping' the tissue closed. The shortening overlaps lack detectable actin filament ensembles but are crowded with microtubules. Cortical accumulation of shrinking microtubule ends suggests a force generation mechanism in which cortical motors pull on microtubule ends as for mitotic spindle positioning. In addition, microtubules orient filopodia and lamellae before zipping. Our 4D electron microscopy picture describes an entire developmental process and provides fundamental insight into epidermal closure. PMID:25893916

  3. Configuration Analysis of the ERS Points in Large-Volume Metrology System.

    PubMed

    Jin, Zhangjun; Yu, Cijun; Li, Jiangxiong; Ke, Yinglin

    2015-01-01

    In aircraft assembly, multiple laser trackers are used simultaneously to measure large-scale aircraft components. To combine the independent measurements, the transformation matrices between the laser trackers' coordinate systems and the assembly coordinate system are calculated, by measuring the enhanced referring system (ERS) points. This article aims to understand the influence of the configuration of the ERS points that affect the transformation matrix errors, and then optimize the deployment of the ERS points to reduce the transformation matrix errors. To optimize the deployment of the ERS points, an explicit model is derived to estimate the transformation matrix errors. The estimation model is verified by the experiment implemented in the factory floor. Based on the proposed model, a group of sensitivity coefficients are derived to evaluate the quality of the configuration of the ERS points, and then several typical configurations of the ERS points are analyzed in detail with the sensitivity coefficients. Finally general guidance is established to instruct the deployment of the ERS points in the aspects of the layout, the volume size and the number of the ERS points, as well as the position and orientation of the assembly coordinate system. PMID:26402685

  4. On `light' fermions and proton stability in `big divisor' D3/ D7 large volume compactifications

    NASA Astrophysics Data System (ADS)

    Misra, Aalok; Shukla, Pramod

    2011-06-01

    Building on our earlier work (Misra and Shukla, Nucl. Phys. B 827:112, 2010; Phys. Lett. B 685:347-352, 2010), we show the possibility of generating "light" fermion mass scales of MeV-GeV range (possibly related to the first two generations of quarks/leptons) as well as eV (possibly related to first two generations of neutrinos) in type IIB string theory compactified on Swiss-Cheese orientifolds in the presence of a mobile space-time filling D3-brane restricted to (in principle) stacks of fluxed D7-branes wrapping the "big" divisor Σ B . This part of the paper is an expanded version of the latter half of Sect. 3 of a published short invited review (Misra, Mod. Phys. Lett. A 26:1, 2011) written by one of the authors [AM]. Further, we also show that there are no SUSY GUT-type dimension-five operators corresponding to proton decay, and we estimate the proton lifetime from a SUSY GUT-type four-fermion dimension-six operator to be 1061 years. Based on GLSM calculations in (Misra and Shukla, Nucl. Phys. B 827:112, 2010) for obtaining the geometric Kähler potential for the "big divisor," using further the Donaldson's algorithm, we also briefly discuss in the first of the two appendices the metric for the Swiss-Cheese Calabi-Yau used, which we obtain and which becomes Ricci flat in the large-volume limit.

  5. Curling probe measurement of large-volume pulsed plasma confined by surface magnetic field

    NASA Astrophysics Data System (ADS)

    Pandey, Anil; Sakakibara, Wataru; Matsuoka, Hiroyuki; Nakamura, Keiji; Sugai, Hideo; Chubu University Team; DOWA Thermotech Collaboration

    2015-09-01

    Curling probe (CP) has recently been developed which enables the local electron density measurement even in plasma for non-conducting film CVD. The electron density is obtained from a shift of resonance frequency of spiral antenna in discharge ON and OFF monitored by a network analyzer (NWA). In case of a pulsed glow discharge, synchronization of discharge pulse with frequency sweep of NWA must be established. In this paper, we report time and space-resolved CP measurement of electron density in a large volume plasma (80 cm diameter, 110 cm length) confined by surface magnetic field (multipole cusp field ~0.03 T). For plasma-aided modification of metal surface, the plasma is produced by 1 kV glow discharge at pulse frequency of 0.3 - 25 kHz with various duty ratio in gas (Ar, N2, C2H2) at pressure ~ 1 Pa. A radially movable CP revealed a remarkable effect of surface magnetic confinement: detach of plasma from the vessel wall and a fairly uniform plasma in the central region. In afterglow phase, the electron density was observed to decrease much faster in C2H2 discharge than in Ar discharge.

  6. Thermal runaway features of large format prismatic lithium ion battery using extended volume accelerating rate calorimetry

    NASA Astrophysics Data System (ADS)

    Feng, Xuning; Fang, Mou; He, Xiangming; Ouyang, Minggao; Lu, Languang; Wang, Hao; Zhang, Mingxuan

    2014-06-01

    In this paper, the thermal runaway features of a 25 Ah large format prismatic lithium ion battery with Li(NixCoyMnz)O2 (NCM) cathode are evaluated using the extended volume-accelerating rate calorimetry (EV-ARC). 4 thermocouples are set at different positions of the battery. The temperature inside the battery is 870 °C or so, much higher than that outside the battery. The temperature difference is calculated from the recorded data. The temperature difference within the battery stays lower than 1 °C for 97% of the test period, while it rises to its highest, approximately 520 °C, when thermal runaway happens. The voltage of the battery is also measured during the test. It takes 15-40 s from the sharp drop of voltage to the instantaneous rise of temperature. Such a time interval is beneficial for early warning of the thermal runaway. Using a pulse charge/discharge profile, the internal resistance is derived from the quotient of the pulse voltage and the current during the ARC test. The internal resistance of the battery increases slowly from 20 mΩ to 60 mΩ before thermal runaway, while it rises to 370 mΩ when thermal runaway happens indicating the loss of the integrity of the separator or the battery swell.

  7. High-resolution and large-volume tomography reconstruction for x-ray microscopy

    NASA Astrophysics Data System (ADS)

    Cheng, Chang-Chieh; Hwu, Yeukuang; Ching, Yu-Tai

    2016-03-01

    This paper presents a method of X-ray image acquisition for the high-resolution tomography reconstruction that uses a light source of synchrotron radiation to reconstruct a three-dimensional tomographic volume dataset for a nanoscale object. For large objects, because of the limited field-of-view, a projection image of an object should to be taken by several shots from different locations, and using an image stitching method to combine these image blocks together. In this study, the overlap of image blocks should be small because our light source is the synchrotron radiation and the X-ray dosage should be minimized as possible. We use the properties of synchrotron radiation to enable the image stitching and alignment success when the overlaps between adjacent image blocks are small. In this study, the size of overlaps can reach to 15% of the size of each image block. During the reconstruction, the mechanical stability should be considered because it leads the misalignment problem in tomography. We adopt the feature-based alignment

  8. A new large-volume metal reference standard for radioactive waste management.

    PubMed

    Tzika, F; Hult, M; Stroh, H; Marissens, G; Arnold, D; Burda, O; Kovář, P; Suran, J; Listkowska, A; Tyminski, Z

    2016-03-01

    A new large-volume metal reference standard has been developed. The intended use is for calibration of free-release radioactivity measurement systems and is made up of cast iron tubes placed inside a box of the size of a Euro-pallet (80 × 120 cm). The tubes contain certified activity concentrations of (60)Co (0.290 ± 0.006 Bq g(-1)) and (110m)Ag (3.05 ± 0.09 Bq g(-1)) (reference date: 30 September 2013). They were produced using centrifugal casting from a smelt into which (60)Co was first added and then one piece of neutron irradiated silver wire was progressively diluted. The iron castings were machined to the desirable dimensions. The final material consists of 12 iron tubes of 20 cm outer diameter, 17.6 cm inner diameter, 40 cm length/height and 245.9 kg total mass. This paper describes the reference standard and the process of determining the reference activity values. PMID:25977349

  9. Multi-stage polymer systems for the autonomic regeneration of large damage volumes

    NASA Astrophysics Data System (ADS)

    Santa Cruz, Windy Ann

    Recovery of catastrophic damage requires a robust chemistry capable of addressing the complex challenges encountered by autonomic regeneration. Although self-healing polymers have the potential to increase material lifetimes and safety, these systems have been limited to recovery of internal microcracks and surface damage. Current technologies thereby fail to address the restoration of large, open damage volumes. A regenerative chemistry was developed by incorporating a gel scaffold within liquid healing agents. The healing system undergoes two stages, sol-gel and gel-polymer. Stage 1, rapid formation of a crosslinked gel, creates a synthetic support for the healing agents as they deposit across the damage region. Stage 2 comprises the polymerization of monomer using a room temperature redox initiation system to recover the mechanical properties of the substrate. The two stages are chemically compatible and only react when a specific reaction trigger is introduced -- an acid catalyst for gelation and initiator-promoter for polymerization. Cure kinetics, chemical and mechanical properties can be tuned by employing different monomer systems. The versatile gelation chemistry gels over 20 vinyl monomers to yield both thermoplastic and thermosetting polymers. The healing efficacy of the two-stage system was studied in thin, vascularized epoxy sheets. By splitting the chemistry into two low viscosity fluids, we demonstrated regeneration of gaps up to 9 mm in diameter. The combination of microvascular networks and a new healing chemistry demonstrates an innovative healing system that significantly exceeds the performance of traditional methods.

  10. A simple method for the production of large volume 3D macroporous hydrogels for advanced biotechnological, medical and environmental applications

    PubMed Central

    Savina, Irina N.; Ingavle, Ganesh C.; Cundy, Andrew B.; Mikhalovsky, Sergey V.

    2016-01-01

    The development of bulk, three-dimensional (3D), macroporous polymers with high permeability, large surface area and large volume is highly desirable for a range of applications in the biomedical, biotechnological and environmental areas. The experimental techniques currently used are limited to the production of small size and volume cryogel material. In this work we propose a novel, versatile, simple and reproducible method for the synthesis of large volume porous polymer hydrogels by cryogelation. By controlling the freezing process of the reagent/polymer solution, large-scale 3D macroporous gels with wide interconnected pores (up to 200 μm in diameter) and large accessible surface area have been synthesized. For the first time, macroporous gels (of up to 400 ml bulk volume) with controlled porous structure were manufactured, with potential for scale up to much larger gel dimensions. This method can be used for production of novel 3D multi-component macroporous composite materials with a uniform distribution of embedded particles. The proposed method provides better control of freezing conditions and thus overcomes existing drawbacks limiting production of large gel-based devices and matrices. The proposed method could serve as a new design concept for functional 3D macroporous gels and composites preparation for biomedical, biotechnological and environmental applications. PMID:26883390

  11. A simple method for the production of large volume 3D macroporous hydrogels for advanced biotechnological, medical and environmental applications

    NASA Astrophysics Data System (ADS)

    Savina, Irina N.; Ingavle, Ganesh C.; Cundy, Andrew B.; Mikhalovsky, Sergey V.

    2016-02-01

    The development of bulk, three-dimensional (3D), macroporous polymers with high permeability, large surface area and large volume is highly desirable for a range of applications in the biomedical, biotechnological and environmental areas. The experimental techniques currently used are limited to the production of small size and volume cryogel material. In this work we propose a novel, versatile, simple and reproducible method for the synthesis of large volume porous polymer hydrogels by cryogelation. By controlling the freezing process of the reagent/polymer solution, large-scale 3D macroporous gels with wide interconnected pores (up to 200 μm in diameter) and large accessible surface area have been synthesized. For the first time, macroporous gels (of up to 400 ml bulk volume) with controlled porous structure were manufactured, with potential for scale up to much larger gel dimensions. This method can be used for production of novel 3D multi-component macroporous composite materials with a uniform distribution of embedded particles. The proposed method provides better control of freezing conditions and thus overcomes existing drawbacks limiting production of large gel-based devices and matrices. The proposed method could serve as a new design concept for functional 3D macroporous gels and composites preparation for biomedical, biotechnological and environmental applications.

  12. Molecular Classification, Pathway Addiction, and Therapeutic Targeting in Diffuse Large B-cell Lymphoma

    PubMed Central

    Puvvada, Soham; Kendrick, Samantha; Rimsza, Lisa

    2015-01-01

    The rapid emergence of molecularly-based techniques to detect changes in the genetic landscape of diffuse large B-cell lymphoma (DLBCL) including gene expression, DNA and RNA sequencing, and epigenetic profiling, has significantly impacted the understanding and therapeutic targeting of DLBCL. In this review, we will briefly discuss the new methods used in the study of DLBCL. We will describe the influence of the generated data on DLBCL classification and the identification of new entities and altered cell survival strategies with a focus on the renewed interest in some classic oncogenic pathways that are currently targeted for new therapy. Lastly, we will examine the molecular genomic studies that revealed the importance of the tumor microenvironment in the pathogenesis of DLBCL. PMID:24080457

  13. Different effects of laser contrast on proton emission from normal large foils and transverse-size-reduced targets

    NASA Astrophysics Data System (ADS)

    Fang, Yuan; Ge, Xulei; Yang, Su; Wei, Wenqing; Yu, Tongpu; Liu, Feng; Chen, Min; Liu, Jingquan; Yuan, Xiaohui; Sheng, Zhengming; Zhang, Jie

    2016-07-01

    We report experimental results on the effects of laser contrast on beam divergence and energy spectrum of protons emitted from ultrashort intense laser interactions with normal large foils and transverse-size-reduced targets. Correlations between beam divergence and spectral shape are found. Large divergence and near-plateau shape energy spectrum are observed for both types of targets when the laser pulse contrast is low. With high contrast laser irradiation, proton beam divergence is remarkably reduced and the energy spectral shape is changed to exponential for large foil targets. In comparison, a similar large divergence and the near-plateau spectral shape remain for transverse-size-reduced targets. The results could be explained by the preplasma formation and target deformation at different laser contrasts and modified accelerating sheath field evolution in transverse-size-reduced target, which were supported by the 2D hydrodynamic and PIC simulations.

  14. Large-Scale High-Resolution Simulations of High Gain Direct-Drive ICF targets

    NASA Astrophysics Data System (ADS)

    Schmitt, Andrew J.

    2003-10-01

    High gain directly-driven targets have been designed using new concepts that mitigate the Richtmyer-Meshkov (RM) and Rayleigh-Taylor (RT) instabilities. Two-dimensional simulations of pellets using these techniques (e.g., "picket" laser pulses) show that high (>100) gain can survive in the face of the hydro instabilities seeded by laser and pellet imperfections. These new designs appear to be substantially more robust than earlier designs. We are using the highly-parallelized sliding-zone Eulerian FAST radiation hydrocode to study yield degradation in these designs. The special challenge in performing these simulations for direct-drive laser ICF is that both high resolution and large dynamic range are needed. High resolution of the whole target is needed to represent all of the scales important during the implosion. A large dynamic range is required to resolve the initially tiny surface and imprint perturbations that grow exponentially during acceleration. We find that the rapid growth of the shell perturbations during the acceleration phase is in good agreement with simple RT modeling before significant nonlinearity occurs. However, the Richtmyer-Meshkov growth during the early pellet compression phase poses a challenge particularly for multimode simulations because of the extremely small initial amplitude for each mode. We will present the results from large-scale pellet implosion simulations, and discuss the challenges and progress achieved in the numerical modeling of these high gain designs.

  15. Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

    PubMed Central

    2012-01-01

    Background The analysis of next-generation sequencing data from large genomes is a timely research topic. Sequencers are producing billions of short sequence fragments from newly sequenced organisms. Computational methods for reconstructing whole genomes/transcriptomes (de novo assemblers) are typically employed to process such data. However, these methods require large memory resources and computation time. Many basic biological questions could be answered targeting specific information in the reads, thus avoiding complete assembly. Results We present Mapsembler, an iterative micro and targeted assembler which processes large datasets of reads on commodity hardware. Mapsembler checks for the presence of given regions of interest that can be constructed from reads and builds a short assembly around it, either as a plain sequence or as a graph, showing contextual structure. We introduce new algorithms to retrieve approximate occurrences of a sequence from reads and construct an extension graph. Among other results presented in this paper, Mapsembler enabled to retrieve previously described human breast cancer candidate fusion genes, and to detect new ones not previously known. Conclusions Mapsembler is the first software that enables de novo discovery around a region of interest of repeats, SNPs, exon skipping, gene fusion, as well as other structural events, directly from raw sequencing reads. As indexing is localized, the memory footprint of Mapsembler is negligible. Mapsembler is released under the CeCILL license and can be freely downloaded from http://alcovna.genouest.org/mapsembler/. PMID:22443449

  16. Advances in large, transportable, highly spin-polarized, solid HD targets operable in the frozen-spin mode in a 1-4K temperature environment

    NASA Astrophysics Data System (ADS)

    Lewis, Aaron Paul

    The development of large, portable highly spin-polarized solid HD targets has been in progress at Syracuse University for the past 5 years. These targets are scheduled for deployment at Brookhaven National Laboratory, bearing the acronym SPHICE (Spin-Polarized Hydrogen Ice), for studies of the electro-magnetic spin structure of the nucleus via scattering of polarized gammas from the HD polarized protons and deuterons. The target work has just reached the milestone demonstration of the complete system, including polarization of triple targets containing 4 moles of solid HD, aging of these targets so that they retain their polarization for months under storage at a temperature of 1.3K and in an 8 Tesla field, and for at least a week at operational conditions of 1.3K and 0.7 Tesla in an in-beam cryostat. Cold-transfers of the polarized targets to a storage cryostat have been successfully carried out, and the storage cryostat has been trucked from Syracuse to BNL with one polarized target, sufficient to test the in-beam operations there. The complete system is presented here, with emphasis on innovations for engagement and disengagement of multiple targets, a solution to the challenge of attaining sufficiently strong RF fields in the large volume probe coils at acceptable power dissipation in the cables, and the polarization production and monitoring in the highly inhomogeneous magnetic fields owing to the multiple targets and the large dimensions of the targets. In this first multiple target production and extraction-to-storage cycle, air-ice accumulation in the dilution refrigerator due to repetitive use of cold sliding o-ring seals resulted in a rupture of one of the inserted targets, and a consequent partial thermal short from a solid HD ice bridge. The o-ring fault was cured with double evacuatable o-ring seals, and the air-ice was successfully cleaned out. However, the refrigerator operating base temperature was substantially higher than that normally obtained

  17. Performance tests of a large volume cerium tribromide (CeBr3) scintillation detector.

    PubMed

    Naqvi, A A; Khiari, F Z; Liadi, F A; Khateeb-Ur-Rehman; Isab, A A

    2016-08-01

    The response of a large cylindrical 76mm×76mm (height×diameter) cerium tribromide (CeBr3) detector was measured for prompt gamma rays. The total intrinsic activity of the CeBr3 detector, which was measured over 0.33-3.33MeV range, was found to be 0.022±0.001 counts/s/cm(3). The partial intrinsic activity ( due to (227)Ac contamination), was measured over a energy range of 1.22-2.20MeV energy, was found to be 0.007±0.001 counts/s/cm(3). Compared to intrinsic activities of LaBr3:Ce and LaCl3:Ce detectors of equivalent volume, the CeBr3 detector has 7-8 times less total intrinsic activity. The detector response for low energy prompt gamma rays was measured over 0.3-0.6MeVgamma energy range using a portable neutron generator-based Prompt Gamma Neutron Activation Analysis (PGNAA) setup. The experimental yield of boron, cadmium and mercury prompt gamma-rays was measured from water samples contaminated with 0.75-2.5wt% mercury, 0.31-2.50wt% boron, and 0.0625-0.500wt% cadmium, respectively. An excellent agreement has been observed between the calculated and experimental yields of the gamma rays. Also minimum detection limit (MDC) of the CeBr3 detector was measured for boron, cadmium and mercury samples. The CeBr3 detector has 23% smaller value of MDCB and 18% larger value of MDCCd than those of a LaBr3:Ce detector of equivalent size. This study has shown that CeBr3 detector has an excellent response for the low energy prompt gamma-rays with almost an order of magnitude low intrinsic activity as compared to LaCl3:Ce and LaBr3:Ce detectors of equivalent volume. PMID:27180221

  18. “Finite” non-Gaussianities and tensor-scalar ratio in large volume Swiss-cheese compactifications

    NASA Astrophysics Data System (ADS)

    Misra, Aalok; Shukla, Pramod

    2009-03-01

    Developing on the ideas of (Section 4 of) [A. Misra, P. Shukla, Moduli stabilization, large-volume dS minimum without anti-D3-branes, (non-)supersymmetric black hole attractors and two-parameter Swiss cheese Calabi-Yau's, Nucl. Phys. B 799 (2008) 165-198, arXiv: 0707.0105] and [A. Misra, P. Shukla, Large volume axionic Swiss-cheese inflation, Nucl. Phys. B 800 (2008) 384-400, arXiv: 0712.1260 [hep-th

  19. Evaluation of a laser scanner for large volume coordinate metrology: a comparison of results before and after factory calibration

    NASA Astrophysics Data System (ADS)

    Ferrucci, M.; Muralikrishnan, B.; Sawyer, D.; Phillips, S.; Petrov, P.; Yakovlev, Y.; Astrelin, A.; Milligan, S.; Palmateer, J.

    2014-10-01

    Large volume laser scanners are increasingly being used for a variety of dimensional metrology applications. Methods to evaluate the performance of these scanners are still under development and there are currently no documentary standards available. This paper describes the results of extensive ranging and volumetric performance tests conducted on a large volume laser scanner. The results demonstrated small but clear systematic errors that are explained in the context of a geometric error model for the instrument. The instrument was subsequently returned to the manufacturer for factory calibration. The ranging and volumetric tests were performed again and the results are compared against those obtained prior to the factory calibration.

  20. Application of ultradisperse magnetic adsorbents for removal of small concentrations of pollutants from large volumes of water

    NASA Astrophysics Data System (ADS)

    Nechitailo, Galina S.; Kuznetsov, Anatoli; Kuznetsov, Oleg

    2016-07-01

    with the adsorbed toluidine blue were removed from the solution by magnetic separation. The sorbent was proven to have high sorption capacity and rapid adsorption kinetics for toluidine blue. These experiments demonstrated the validity of the method, where a small concentration of a pollutant was successfully collected from a large volume of water. By varying the ratio of the sorbent/pollutant, it is possible to optimize the sorbent use and the time required to adsorb all pollutant present in the treated water. A variety of magnetically controlled sorbents can be designed and used in this method, from broad-spectrum adsorbing sorbents to sorbents specifically targeting a particular pollutant. These sorbents can be used either individually or as mixtures of sorbents with different properties, depending on the desired purification goals. Simplicity and scalability of this method allow a variety of ecological applications, as well as industrial ones, from process water purification to wastewater treatment.

  1. A New Suggestion for the Radiation Target Volume After a Subtotal Gastrectomy in Patients With Stomach Cancer

    SciTech Connect

    Nam, Heerim; Lim, Do Hoon Kim, Sung; Kang, Won Ki; Sohn, Tae Sung; Noh, Jae Hyung; Kim, Yong Il; Park, Chan Hyung; Park, Chul Keun; Ahn, Yong Chan; Huh, Seung Jae

    2008-06-01

    Purpose: To compare treatment results between the use of two different radiation fields including and excluding remnant stomach and suggest new target volumes excluding remnant stomach after subtotal gastrectomy (STG) in patients with stomach cancer. Methods and Materials: We retrospectively analyzed 291 patients treated with adjuvant chemoradiotherapy after STG and D2 dissection at the Samsung Medical Center, Seoul, South Korea. Eighty-three patients registered from 1995 to 1997 underwent irradiation according to the INT 0116 protocol that recommended the inclusion of remnant stomach within the target volume (Group A). After this period, we excluded remnant stomach from the target volume for 208 patients (Group B). Median follow-up was 67 months. Results: Treatment failure developed in 93 patients (32.0%). Local and regional recurrence rates for Group A vs. Group B were 10.8% vs. 5.3% (p = not significant) and 9.6% vs. 6.3% (p = not significant), and recurrence rates for remnant stomach were 7.2% vs. 1.4% (p = 0.018), respectively. Overall and disease-free survival rates were not different between the two groups. Grade 3 or 4 vomiting and diarrhea developed more frequently in Group A than Group B (4.8% vs. 1.4% and 6.0% vs. 1.9%, respectively; p = 0.012; p < 0.001). Conclusion: Exclusion of remnant stomach from the radiation field had no effect on failure rates or survival, and a low complication rate occurred in patients treated excluding remnant stomach. We suggest that remnant stomach be excluded from the radiation target volume for patients with stomach cancer who undergo STG and D2 dissection.

  2. {sup 11}C-methionine PET improves the target volume delineation of meningiomas treated with stereotactic fractionated radiotherapy

    SciTech Connect

    Grosu, Anca-Ligia . E-mail: anca-ligia.grosu@lrz.tum.de; Weber, Wolfgang A.; Astner, Sabrina T.; Adam, Markus; Krause, Bernd J.; Schwaiger, Markus; Molls, Michael; Nieder, Carsten

    2006-10-01

    Purpose: To evaluate the role of {sup 11}C-methionine positron emission tomography (MET-PET) in target volume delineation for meningiomas and to determine the interobserver variability. Methods and Materials: Two independent observers performed treatment planning in 10 patients according to a prospective written protocol. In the first step, they used coregistered computed tomography (CT) and magnetic resonance imaging (MRI). In the second step, MET-PET was added to CT/MRI (image fusion based on mutual information). Results: The correlation between gross tumor volume (GTVs) delineated by the two observers based on CT/MRI was r = 0.855 (Spearman's correlation coefficient, p = 0.002) and r = 0.988 (p = 0.000) when MET-PET/CT/MRI were used. The number of patients with agreement in more then 80% of the outlined volume increased with the availability of MET-PET from 1 in 10 to 5 in 10. The median volume of intersection between the regions delineated by two observers increased significantly from 69% (from the composite volume) to 79%, by the addition of MET-PET (p = 0.005). The information of MET-PET was useful to delineate GTV in the area of cavernous sinus, orbit, and base of the skull. Conclusions: The hypothesis-generating findings of potential normal tissue sparing and reduced interobserver variability provide arguments for invasive studies of the correlation between MET-PET images and histologic tumor extension and for prospective trials of target volume delineation with CT/MRI/MET-PET image fusion.

  3. Multinucleated Giant Cells Are Specialized for Complement-Mediated Phagocytosis and Large Target Destruction

    PubMed Central

    Milde, Ronny; Ritter, Julia; Tennent, Glenys A.; Loesch, Andrzej; Martinez, Fernando O.; Gordon, Siamon; Pepys, Mark B.; Verschoor, Admar; Helming, Laura

    2015-01-01

    Summary Multinucleated giant cells (MGCs) form by fusion of macrophages and are presumed to contribute to the removal of debris from tissues. In a systematic in vitro analysis, we show that IL-4-induced MGCs phagocytosed large and complement-opsonized materials more effectively than their unfused M2 macrophage precursors. MGC expression of complement receptor 4 (CR4) was increased, but it functioned primarily as an adhesion integrin. In contrast, although expression of CR3 was not increased, it became functionally activated during fusion and was located on the extensive membrane ruffles created by excess plasma membrane arising from macrophage fusion. The combination of increased membrane area and activated CR3 specifically equips MGCs to engulf large complement-coated targets. Moreover, we demonstrate these features in vivo in the recently described complement-dependent therapeutic elimination of systemic amyloid deposits by MGCs. MGCs are evidently more than the sum of their macrophage parts. PMID:26628365

  4. The prevalence of two 'commonly' encountered synthetic target fibres within a large urban environment.

    PubMed

    Palmer, R; Burnett, E; Luff, N; Wagner, C; Stinga, G; Carney, C; Sheridan, K

    2015-03-01

    A target fibre study was carried out to assess the random prevalence of two ostensibly commonly encountered synthetic fibre types; black acrylic and blue polyester. The study was performed in an environment which maximised the number of random contacts between textile garments in the population and specific surfaces, namely; seating relating to buses, public houses and cinemas found within a large urban conurbation. Surface debris tapings were collected from samples of bus seats (30), pub seats (54) and cinema seats (53). Using low power stereomicroscopy, a total of 114 and 68 fibres, superficially similar to the respective black acrylic and blue polyester target fibres, were recovered from these tapings. The full range of comparative microscopical and instrumental analysis used in operational forensic laboratories was performed on the recovered fibres. No matches were found with either of the target fibres. These findings are in accordance with similar studies which show that the probability of an 'adventitious' match with a particular fibre type/colour combination is extremely low. In addition, the findings demonstrate that the current techniques and instrumentation employed by operational forensic laboratories are fit for purpose. Importantly, the findings demonstrate that databases and surveys (e.g. fibre population studies) which do not consider the analytical/comparison processes, must not be used in isolation when evaluating fibre evidence at source level. PMID:25753995

  5. NT-proBNP Changes in Patients with Ascites during Large Volume Paracentesis

    PubMed Central

    Zielinski, Rob; Harnett, Paul; Chan, Henry; Vootakuru, Nikitha; Khan, Montaha; Phillips, Shani; George, Jacob; van der Poorten, David

    2013-01-01

    Background. N-terminal probrain natriuretic peptide (NT-proBNP) is a hormone involved in the regulation of cardiovascular homeostasis. Changes in serum NT-proBNP during large volume paracentesis (LVP) in patients with ascites have never before been examined. Aims. To determine if significant changes in serum NT-proBNP occur in patients undergoing LVP and the associated clinical correlates in patients with cirrhosis. Method. A total of 45 patients with ascites were prospectively recruited. Serum NT-proBNP, biochemistry, and haemodynamics were determined at baseline and at key time points during and after paracentesis. Results. 34 patients were analysed; 19 had ascites due to cirrhosis and 15 from malignancy. In those with cirrhosis, NT-proBNP decreased by 77.3 pg/mL at 2 L of drainage and 94.3 pg/mL at the end of paracentesis, compared with an increase of 10.5 pg/mL and 77.2 pg/mL in cancer patients at the same time points (P = 0.05 and P = 0.03). Only congestive cardiac failure (CCF) was an independent predictor of significant NT-proBNP changes at the end of drainage in cirrhotic patients (P < 0.01). There were no significant changes in haemodynamics or renal biochemistry for either group. Conclusion. Significant reductions in serum NT-proBNP during LVP occur in patients with cirrhosis but not malignancy, and only comorbid CCF appeared to predict such changes.

  6. Large-volume lava flow fields on Venus: Dimensions and morphology

    NASA Technical Reports Server (NTRS)

    Lancaster, M. G.; Guest, J. E.; Roberts, K. M.; Head, James W., III

    1992-01-01

    Of all the volcanic features identified in Magellan images, by far the most extensive and really important are lava flow fields. Neglecting the widespread lava plains themselves, practically every C1-MIDR produced so far contains several or many discrete lava flow fields. These range in size from a few hundred square kilometers in area (like those fields associated with small volcanic edifices for example), through all sizes up to several hundred thousand square kilometers in extent (such as many rift related fields). Most of these are related to small, intermediate, or large-scale volcanic edifices, coronae, arachnoids, calderas, fields of small shields, and rift zones. An initial survey of 40 well-defined flow fields with areas greater than 50,000 sq km (an arbitrary bound) has been undertaken. Following Columbia River Basalt terminology, these have been termed great flow fields. This represents a working set of flow fields, chosen to cover a variety of morphologies, sources, locations, and characteristics. The initial survey is intended to highlight representative flow fields, and does not represent a statistical set. For each flow field, the location, total area, flow length, flow widths, estimated flow thicknesses, estimated volumes, topographic slope, altitude, backscatter, emissivity, morphology, and source has been noted. The flow fields range from about 50,000 sq km to over 2,500,000 sq km in area, with most being several hundred square kilometers in extent. Flow lengths measure between 140 and 2840 km, with the majority of flows being several hundred kilometers long. A few basic morphological types have been identified.

  7. Trace analysis of semivolatile organic compounds in large volume samples of snow, lake water, and groundwater.

    PubMed

    Usenko, Sascha; Hageman, Kimberly J; Schmedding, Dave W; Wilson, Glenn R; Simonich, Staci L

    2005-08-15

    An analytical method was developed for the trace analysis of a wide range of semivolatile organic compounds (SOCs) in 50-L high-elevation snow and lake water samples. The method was validated for 75 SOCs from seven different chemical classes (polycyclic aromatic hydrocarbons, organochlorine pesticides, amides, triazines, polychlorinated biphenyls, thiocarbamates, and phosphorothioates) that covered a wide range of physical-chemical properties including 7 orders of magnitude of octanol-water partition coefficient (log K(ow) = 1.4-8.3). The SOCs were extracted using a hydrophobically and hydrophilically modified divinylbenzene solid-phase extraction device (modified Speedisk). The average analyte recovery from 50 L of reverse osmosis water, using the modified Speedisk, was 99% with an average relative standard deviation of 4.8%. Snow samples were collected from the field, melted, and extracted using the modified Speedisk and a poly(tetrafluoroethylene) remote sample adapter in the laboratory. Lake water was sampled, filtered, and extracted in situ using an Infiltrex 100 fitted with a 1-microm glass fiber filter to trap particulate matter and the modified Speedisk to trap dissolved SOCs. The extracts were analyzed by gas chromatographic mass spectrometry with electron impact ionization and electron capture negative ionization using isotope dilution and selective ion monitoring. Estimated method detection limits for snow and lake water ranged from 0.2 to 125 pg/L and 0.5-400 pg/L, respectively. U.S. historic and current-use pesticides were identified and quantified in snow and lake water samples collected from Rocky Mountain National Park, CO. The application of the analytical method to the analysis of SOCs in large-volume groundwater samples is also shown. PMID:16173557

  8. Bichromatic Cooling used to Achieve a Large Number of Cold Atoms in a Compact Volume

    NASA Astrophysics Data System (ADS)

    Cubel Liebisch, Tara; Donley, Elizabeth; Blanshan, Eric; Kitching, John

    2010-03-01

    For cold atomic samples to be used in emerging technologies such as compact atomic clocks and sensors it is necessary to achieve small sample sizes with a large number of cold atoms. This is a challenge because in a magneto-optical trap (MOT) the number of cooled and trapped atoms scales as d^4, where d is the diameter of the laser beams (Gibble et.al.OL17, 526 (1992)). In a MOT the maximum radiation force is limited by spontaneous emission to hkγ/2. Bichromatic cooling first studied by Söding et.al. (PRL78,1420(1997)), takes advantage of stimulated emission and driven Rabi oscillations to cool atoms over a broad velocity range with forces >> hkγ/2. With the faster cooling rates, larger atom numbers can be obtained in very small cooling volumes. We report on preliminary results of cooling a thermal beam down to MOT capture velocities over distances of <1cm, our experimental set up, and theoretical results using our experimental parameters. We expect to be able to load a MOT with 1mm diameter beams with a factor of 100 more atoms than if loaded from a background vapor. With this atom sample we estimate we could achieve a clock stability of 1E-12 @ 1s with a Ramsey time of 4ms, a cycle time of 10ms, and a clock transition frequency of 6.8GHz. [0pt] We would like to acknowledge funding from NIST, DARPA, and NRC.

  9. A pomegranate-inspired nanoscale design for large-volume-change lithium battery anodes

    NASA Astrophysics Data System (ADS)

    Liu, Nian; Lu, Zhenda; Zhao, Jie; McDowell, Matthew T.; Lee, Hyun-Wook; Zhao, Wenting; Cui, Yi

    2014-03-01

    Silicon is an attractive material for anodes in energy storage devices, because it has ten times the theoretical capacity of its state-of-the-art carbonaceous counterpart. Silicon anodes can be used both in traditional lithium-ion batteries and in more recent Li-O2 and Li-S batteries as a replacement for the dendrite-forming lithium metal anodes. The main challenges associated with silicon anodes are structural degradation and instability of the solid-electrolyte interphase caused by the large volume change (~300%) during cycling, the occurrence of side reactions with the electrolyte, and the low volumetric capacity when the material size is reduced to a nanometre scale. Here, we propose a hierarchical structured silicon anode that tackles all three of these problems. Our design is inspired by the structure of a pomegranate, where single silicon nanoparticles are encapsulated by a conductive carbon layer that leaves enough room for expansion and contraction following lithiation and delithiation. An ensemble of these hybrid nanoparticles is then encapsulated by a thicker carbon layer in micrometre-size pouches to act as an electrolyte barrier. As a result of this hierarchical arrangement, the solid-electrolyte interphase remains stable and spatially confined, resulting in superior cyclability (97% capacity retention after 1,000 cycles). In addition, the microstructures lower the electrode-electrolyte contact area, resulting in high Coulombic efficiency (99.87%) and volumetric capacity (1,270 mAh cm-3), and the cycling remains stable even when the areal capacity is increased to the level of commercial lithium-ion batteries (3.7 mAh cm-2).

  10. Hepatic Arterial Embolization and Chemoembolization in the Management of Patients with Large-Volume Liver Metastases

    SciTech Connect

    Kamat, Paresh P.; Gupta, Sanjay Ensor, Joe E.; Murthy, Ravi; Ahrar, Kamran; Madoff, David C.; Wallace, Michael J.; Hicks, Marshall E.

    2008-03-15

    The purpose of this study was to assess the role of hepatic arterial embolization (HAE) and chemoembolization (HACE) in patients with large-volume liver metastases. Patients with metastatic neuroendocrine tumors, melanomas, or gastrointestinal stromal tumors (GISTs) with >75% liver involvement who underwent HAE or HACE were included in the study. Radiologic response, progression-free survival (PFS), overall survival (OS), and postprocedure complications were assessed. Sixty patients underwent 123 treatment sessions. Of the 48 patients for whom follow-up imaging was available, partial response was seen in 12 (25%) patients, minimal response in 6 (12%), stable disease in 22 (46%), and progressive disease in 8 (17%). Median OS and PFS were 9.3 and 4.9 months, respectively. Treatment resulted in radiologic response or disease stabilization in 82% and symptomatic response in 65% of patients with neuroendocrine tumors. Patients with neuroendocrine tumors had higher response rates (44% vs. 27% and 0%; p = 0.31) and longer PFS (9.2 vs. 2.0 and 2.3 months; p < 0.0001) and OS (17.9 vs. 2.4 and 2.3 months; p < 0.0001) compared to patients with melanomas and GISTs. Major complications occurred in 21 patients after 23 (19%) of the 123 sessions. Nine of the 12 patients who developed major complications resulting in death had additional risk factors-carcinoid heart disease, sepsis, rapidly worsening performance status, or anasarca. In conclusion, in patients with neuroendocrine tumors with >75% liver involvement, HAE/HACE resulted in symptom palliation and radiologic response or disease stabilization in the majority of patients. Patients with hepatic metastases from melanomas and GISTs, however, did not show any appreciable benefit from this procedure. Patients with massive liver tumor burden, who have additional risk factors, should not be subjected to HAE/HACE because of the high risk of procedure-related mortality.

  11. Changes in the planning target volume and liver volume dose based on the selected respiratory phase in respiratory-gated radiation therapy for a hepatocellular carcinoma

    NASA Astrophysics Data System (ADS)

    Lee, Jae-Seung; Im, In-Chul; Kang, Su-Man; Goo, Eun-Hoe; Baek, Seong-Min

    2013-11-01

    The aim of this study was to quantitatively analyze the changes in the planning target volume (PTV) and liver volume dose based on the respiratory phase to identify the optimal respiratory phase for respiratory-gated radiation therapy for a hepatocellular carcinoma (HCC). Based on the standardized procedure for respiratory-gated radiation therapy, we performed a 4-dimensional computed tomography simulation for 0 ˜ 90%, 30 ˜ 70%, and 40 ˜ 60% respiratory phases to assess the respiratory stability (S R ) and the defined PTV i for each respiratory phase i. A treatment plan was established, and the changes in the PTV i and dose volume of the liver were quantitatively analyzed. Most patients (91.5%) passed the respiratory stability test (S R = 0.111 ± 0.015). With standardized respiration training exercises, we were able to minimize the overall systematic error caused by irregular respiration. Furthermore, a quantitative analysis to identify the optimal respiratory phase revealed that when a short respiratory phase (40 ˜ 60%) was used, the changes in the PTV were concentrated inside the center line; thus, we were able to obtain both a PTV margin accounting for respiration and a uniform radiation dose within the PTV.

  12. Expediting SRM assay development for large-scale targeted proteomics experiments

    SciTech Connect

    Wu, Chaochao; Shi, Tujin; Brown, Joseph N.; He, Jintang; Gao, Yuqian; Fillmore, Thomas L.; Shukla, Anil K.; Moore, Ronald J.; Camp, David G.; Rodland, Karin D.; Qian, Weijun; Liu, Tao; Smith, Richard D.

    2014-10-03

    Due to their high sensitivity and specificity, targeted proteomics measurements, e.g. selected reaction monitoring (SRM), are becoming increasingly popular for biological and translational applications. Selection of optimal transitions and optimization of collision energy (CE) are important assay development steps for achieving sensitive detection and accurate quantification; however, these steps can be labor-intensive, especially for large-scale applications. Herein, we explored several options for accelerating SRM assay development evaluated in the context of a relatively large set of 215 synthetic peptide targets. We first showed that HCD fragmentation is very similar to CID in triple quadrupole (QQQ) instrumentation, and by selection of top six y fragment ions from HCD spectra, >86% of top transitions optimized from direct infusion on QQQ instrument are covered. We also demonstrated that the CE calculated by existing prediction tools was less accurate for +3 precursors, and a significant increase in intensity for transitions could be obtained using a new CE prediction equation constructed from the present experimental data. Overall, our study illustrates the feasibility of expediting the development of larger numbers of high-sensitivity SRM assays through automation of transitions selection and accurate prediction of optimal CE to improve both SRM throughput and measurement quality.

  13. Discovery of Manassantin A Protein Targets Using Large-Scale Protein Folding and Stability Measurements.

    PubMed

    Geer Wallace, M Ariel; Kwon, Do-Yeon; Weitzel, Douglas H; Lee, Chen-Ting; Stephenson, Tesia N; Chi, Jen-Tsan; Mook, Robert A; Dewhirst, Mark W; Hong, Jiyong; Fitzgerald, Michael C

    2016-08-01

    Manassantin A is a natural product that has been shown to have anticancer activity in cell-based assays, but has a largely unknown mode-of-action. Described here is the use of two different energetics-based approaches to identify protein targets of manassantin A. Using the stability of proteins from rates of oxidation technique with an isobaric mass tagging strategy (iTRAQ-SPROX) and the pulse proteolysis technique with a stable isotope labeling with amino acids in cell culture strategy (SILAC-PP), over 1000 proteins in a MDA-MB-231 cell lysate grown under hypoxic conditions were assayed for manassantin A interactions (both direct and indirect). A total of 28 protein hits were identified with manassantin A-induced thermodynamic stability changes. Two of the protein hits (filamin A and elongation factor 1α) were identified using both experimental approaches. The remaining 26 hit proteins were only assayed in either the iTRAQ-SPROX or the SILAC-PP experiment. The 28 potential protein targets of manassantin A identified here provide new experimental avenues along which to explore the molecular basis of manassantin A's mode of action. The current work also represents the first application iTRAQ-SPROX and SILAC-PP to the large-scale analysis of protein-ligand binding interactions involving a potential anticancer drug with an unknown mode-of-action. PMID:27322910

  14. Expediting SRM Assay Development for Large-Scale Targeted Proteomics Experiments

    PubMed Central

    2015-01-01

    Because of its high sensitivity and specificity, selected reaction monitoring (SRM)-based targeted proteomics has become increasingly popular for biological and translational applications. Selection of optimal transitions and optimization of collision energy (CE) are important assay development steps for achieving sensitive detection and accurate quantification; however, these steps can be labor-intensive, especially for large-scale applications. Herein, we explored several options for accelerating SRM assay development evaluated in the context of a relatively large set of 215 synthetic peptide targets. We first showed that HCD fragmentation is very similar to that of CID in triple quadrupole (QQQ) instrumentation and that by selection of the top 6 y fragment ions from HCD spectra, >86% of the top transitions optimized from direct infusion with QQQ instrumentation are covered. We also demonstrated that the CE calculated by existing prediction tools was less accurate for 3+ precursors and that a significant increase in intensity for transitions could be obtained using a new CE prediction equation constructed from the present experimental data. Overall, our study illustrated the feasibility of expediting the development of larger numbers of high-sensitivity SRM assays through automation of transition selection and accurate prediction of optimal CE to improve both SRM throughput and measurement quality. PMID:25145539

  15. Expediting SRM assay development for large-scale targeted proteomics experiments

    SciTech Connect

    Wu, Chaochao; Shi, Tujin; Brown, Joseph N.; He, Jintang; Gao, Yuqian; Fillmore, Thomas L.; Shukla, Anil K.; Moore, Ronald J.; Camp, David G.; Rodland, Karin D.; Qian, Weijun; Liu, Tao; Smith, Richard D.

    2014-08-22

    Due to their high sensitivity and specificity, targeted proteomics measurements, e.g. selected reaction monitoring (SRM), are becoming increasingly popular for biological and translational applications. Selection of optimal transitions and optimization of collision energy (CE) are important assay development steps for achieving sensitive detection and accurate quantification; however, these steps can be labor-intensive, especially for large-scale applications. Herein, we explored several options for accelerating SRM assay development evaluated in the context of a relatively large set of 215 synthetic peptide targets. We first showed that HCD fragmentation is very similar to CID in triple quadrupole (QQQ) instrumentation, and by selection of top six y fragment ions from HCD spectra, >86% of top transitions optimized from direct infusion on QQQ instrument are covered. We also demonstrated that the CE calculated by existing prediction tools was less accurate for +3 precursors, and a significant increase in intensity for transitions could be obtained using a new CE prediction equation constructed from the present experimental data. Overall, our study illustrates the feasibility of expediting the development of larger numbers of high-sensitivity SRM assays through automation of transitions selection and accurate prediction of optimal CE to improve both SRM throughput and measurement quality.

  16. Expediting SRM assay development for large-scale targeted proteomics experiments

    DOE PAGESBeta

    Wu, Chaochao; Shi, Tujin; Brown, Joseph N.; He, Jintang; Gao, Yuqian; Fillmore, Thomas L.; Shukla, Anil K.; Moore, Ronald J.; Camp, David G.; Rodland, Karin D.; et al

    2014-08-22

    Due to their high sensitivity and specificity, targeted proteomics measurements, e.g. selected reaction monitoring (SRM), are becoming increasingly popular for biological and translational applications. Selection of optimal transitions and optimization of collision energy (CE) are important assay development steps for achieving sensitive detection and accurate quantification; however, these steps can be labor-intensive, especially for large-scale applications. Herein, we explored several options for accelerating SRM assay development evaluated in the context of a relatively large set of 215 synthetic peptide targets. We first showed that HCD fragmentation is very similar to CID in triple quadrupole (QQQ) instrumentation, and by selection ofmore » top six y fragment ions from HCD spectra, >86% of top transitions optimized from direct infusion on QQQ instrument are covered. We also demonstrated that the CE calculated by existing prediction tools was less accurate for +3 precursors, and a significant increase in intensity for transitions could be obtained using a new CE prediction equation constructed from the present experimental data. Overall, our study illustrates the feasibility of expediting the development of larger numbers of high-sensitivity SRM assays through automation of transitions selection and accurate prediction of optimal CE to improve both SRM throughput and measurement quality.« less

  17. Toroidal transducer with two large focal zones for increasing the coagulated volume

    NASA Astrophysics Data System (ADS)

    Vincenot, J.; Melodelima, D.; Kocot, A.; Chavrier, F.; Chapelon, J. Y.

    2012-11-01

    Toroidal HIFU transducers have been shown to generate large conical ablations (7 cm3 in 40 seconds). The focal zone is composed of a first ring-shaped focal zone and an overlap of ultrasound beams behind this first focus. A HIFU device has been developed on this principle to treat liver metastases during an open procedure. Although these large lesions contribute to reduce treatment time, it is still needed to juxtapose 4 to 9 single HIFU lesions to treat liver metastasis (2 cm in diameter) with safety margins. In this work, a different toroidal geometry was used. With this transducer, the overlap area is located between the probe and the focal ring. The objective was to use this transducer with electronic focusing in order to create a spherical shape lesion with sufficient volume for the destruction of a metastasis of 2 cm in diameter without any mechanical displacement. The operating frequency of the toroidal transducer was 2.5 MHz. The radius of curvature was 70 mm with a diameter of 67 mm. The focal ring had a radius of 15 mm. The overlap zone extent between 35 to 55 mm from the emitting surface. An ultrasound-imaging probe (working at 7.5 MHz) was placed in a central circular opening of 26 mm in the HIFU transducer and was aligned with the focal plane. The transducer was divided into 32 rings of 78 mm2. Using a 32 channels amplifier with a phase resolution of 1.4 degrees, it was possible to change the diameter (0 to 15 mm) and depth (45 to 85 mm) of the focus circle to maximize dimensions of the lesion. Tests were conducted in vitro, in bovine liver samples. This toroidal geometry and the use of electronic beam steering allow the creation of roughly spherical lesions (diameter of 47 mm, depth of 35 mm). This treatment was obtained in 6 minutes and 10 seconds without any mechanical displacement of the transducer. The lesions obtained were homogeneous and no untreated area was observed. In conclusion, these results indicate that the treatment of a liver

  18. Validation of a 4D-PET Maximum Intensity Projection for Delineation of an Internal Target Volume

    SciTech Connect

    Callahan, Jason; Kron, Tomas; Schneider-Kolsky, Michal; Dunn, Leon; Thompson, Mick; Siva, Shankar; Aarons, Yolanda; Binns, David; Hicks, Rodney J.

    2013-07-15

    Purpose: The delineation of internal target volumes (ITVs) in radiation therapy of lung tumors is currently performed by use of either free-breathing (FB) {sup 18}F-fluorodeoxyglucose-positron emission tomography-computed tomography (FDG-PET/CT) or 4-dimensional (4D)-CT maximum intensity projection (MIP). In this report we validate the use of 4D-PET-MIP for the delineation of target volumes in both a phantom and in patients. Methods and Materials: A phantom with 3 hollow spheres was prepared surrounded by air then water. The spheres and water background were filled with a mixture of {sup 18}F and radiographic contrast medium. A 4D-PET/CT scan was performed of the phantom while moving in 4 different breathing patterns using a programmable motion device. Nine patients with an FDG-avid lung tumor who underwent FB and 4D-PET/CT and >5 mm of tumor motion were included for analysis. The 3 spheres and patient lesions were contoured by 2 contouring methods (40% of maximum and PET edge) on the FB-PET, FB-CT, 4D-PET, 4D-PET-MIP, and 4D-CT-MIP. The concordance between the different contoured volumes was calculated using a Dice coefficient (DC). The difference in lung tumor volumes between FB-PET and 4D-PET volumes was also measured. Results: The average DC in the phantom using 40% and PET edge, respectively, was lowest for FB-PET/CT (DCAir = 0.72/0.67, DCBackground 0.63/0.62) and highest for 4D-PET/CT-MIP (DCAir = 0.84/0.83, DCBackground = 0.78/0.73). The average DC in the 9 patients using 40% and PET edge, respectively, was also lowest for FB-PET/CT (DC = 0.45/0.44) and highest for 4D-PET/CT-MIP (DC = 0.72/0.73). In the 9 lesions, the target volumes of the FB-PET using 40% and PET edge, respectively, were on average 40% and 45% smaller than the 4D-PET-MIP. Conclusion: A 4D-PET-MIP produces volumes with the highest concordance with 4D-CT-MIP across multiple breathing patterns and lesion sizes in both a phantom and among patients. Freebreathing PET/CT consistently

  19. 21 CFR 201.323 - Aluminum in large and small volume parenterals used in total parenteral nutrition.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... used in total parenteral nutrition. 201.323 Section 201.323 Food and Drugs FOOD AND DRUG ADMINISTRATION... parenteral nutrition. (a) The aluminum content of large volume parenteral (LVP) drug products used in total parenteral nutrition (TPN) therapy must not exceed 25 micrograms per liter (µg/L). (b) The package insert...

  20. 21 CFR 201.323 - Aluminum in large and small volume parenterals used in total parenteral nutrition.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... used in total parenteral nutrition. 201.323 Section 201.323 Food and Drugs FOOD AND DRUG ADMINISTRATION... parenteral nutrition. (a) The aluminum content of large volume parenteral (LVP) drug products used in total parenteral nutrition (TPN) therapy must not exceed 25 micrograms per liter (µg/L). (b) The package insert...

  1. 21 CFR 201.323 - Aluminum in large and small volume parenterals used in total parenteral nutrition.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... used in total parenteral nutrition. 201.323 Section 201.323 Food and Drugs FOOD AND DRUG ADMINISTRATION... parenteral nutrition. (a) The aluminum content of large volume parenteral (LVP) drug products used in total parenteral nutrition (TPN) therapy must not exceed 25 micrograms per liter (µg/L). (b) The package insert...

  2. 21 CFR 201.323 - Aluminum in large and small volume parenterals used in total parenteral nutrition.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... used in total parenteral nutrition. 201.323 Section 201.323 Food and Drugs FOOD AND DRUG ADMINISTRATION... parenteral nutrition. (a) The aluminum content of large volume parenteral (LVP) drug products used in total parenteral nutrition (TPN) therapy must not exceed 25 micrograms per liter (µg/L). (b) The package insert...

  3. 21 CFR 201.323 - Aluminum in large and small volume parenterals used in total parenteral nutrition.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... used in total parenteral nutrition. 201.323 Section 201.323 Food and Drugs FOOD AND DRUG ADMINISTRATION... parenteral nutrition. (a) The aluminum content of large volume parenteral (LVP) drug products used in total parenteral nutrition (TPN) therapy must not exceed 25 micrograms per liter (µg/L). (b) The package insert...

  4. ENVIRONMENTAL ASSESSMENT OF NOX CONTROL ON A SPARK-IGNITED LARGE BORE RECIPROCATING INTERNAL COMBUSTION ENGINE. VOLUME 2. DATA SUPPLEMENT

    EPA Science Inventory

    Volume II of the report is a compendium of detailed emission and test data from field tests of a large-bore, spark-ignited reciprocating engine and laboratory analyses of collected samples. The engine was tested in two operating modes: a baseline (normal) operation, and with incr...

  5. ENVIRONMENTAL ASSESSMENT OF NOX CONTROL ON A COMPRESSION IGNITION LARGE BORE RECIPROCATING INTERNAL COMBUSTION ENGINE. VOLUME 1. TECHNICAL RESULTS

    EPA Science Inventory

    Volume I of the report gives emission results from field tests of the exhaust gas from a large-bore, compression-ignition reciprocating engine burning diesel fuel. An objective of the tests was to evaluate the operating efficiency of the engine with combustion modification NOx co...

  6. ENVIRONMENTAL ASSESSMENT OF NOX CONTROL ON A COMPRESSION IGNITION LARGE BORE RECIPROCATING INTERNAL COMBUSTION ENGINE. VOLUME 2. DATA SUPPLEMENT

    EPA Science Inventory

    Volume II of the report is a compendium of detailed emission and test data from field tests of a large-bore, compression-ignition reciprocating engine burning diesel fuel. The engine was tested during two operating modes: at baseline (normal operation), and with fuel injection re...

  7. Effect of filtration rates on hollow fiber ultrafilter concentration of viruses and protozoans from large volumes of water

    EPA Science Inventory

    Aims: To describe the ability of tangential flow hollow-fiber ultrafiltration to recover viruses from large volumes of water when run either at high filtration rates or lower filtration rates and recover Cryptosporidium parvum at high filtration rates. Methods and Results: Wate...

  8. ANALYSIS OF LOW-LEVEL PESTICIDES FROM HIGH-ELEVATION LAKE WATERS BY LARGE VOLUME INJECTION GCMS

    EPA Science Inventory

    This paper describes the method development for the determination of ultra-low level pesticides from high-elevation lake waters by large-volume injection programmable temperature vaporizer (LVI-PTV) GC/MS. This analytical method is developed as a subtask of a larger study, backgr...

  9. Large-Scale Targeted Proteomics Using Internal Standard Triggered-Parallel Reaction Monitoring (IS-PRM)*

    PubMed Central

    Gallien, Sebastien; Kim, Sang Yoon; Domon, Bruno

    2015-01-01

    Targeted high-resolution and accurate mass analyses performed on fast sequencing mass spectrometers have opened new avenues for quantitative proteomics. More specifically, parallel reaction monitoring (PRM) implemented on quadrupole-orbitrap instruments exhibits exquisite selectivity to discriminate interferences from analytes. Furthermore, the instrument trapping capability enhances the sensitivity of the measurements. The PRM technique, applied to the analysis of limited peptide sets (typically 50 peptides or less) in a complex matrix, resulted in an improved detection and quantification performance as compared with the reference method of selected reaction monitoring performed on triple quadrupole instruments. However, the implementation of PRM for the analysis of large peptide numbers requires the adjustment of mass spectrometry acquisition parameters, which affects dramatically the quality of the generated data, and thus the overall output of an experiment. A newly designed data acquisition scheme enabled the analysis of moderate-to-large peptide numbers while retaining a high performance level. This new method, called internal standard triggered-parallel reaction monitoring (IS-PRM), relies on added internal standards and the on-the-fly adjustment of acquisition parameters to drive in real-time measurement of endogenous peptides. The acquisition time management was designed to maximize the effective time devoted to measure the analytes in a time-scheduled targeted experiment. The data acquisition scheme alternates between two PRM modes: a fast low-resolution “watch mode” and a “quantitative mode” using optimized parameters ensuring data quality. The IS-PRM method exhibited a highly effective use of the instrument time. Applied to the analysis of large peptide sets (up to 600) in complex samples, the method showed an unprecedented combination of scale and analytical performance, with limits of quantification in the low amol range. The successful

  10. SU-E-J-78: Internal Target Volume Delineation for Lung Tumors in Patients Treated with Robotic Radiosurgery

    SciTech Connect

    Descovich, M; Pinnaduwage, D; Kirby, N; Gottschalk, A; Yom, S; Pouliot, J; Braunstein, S

    2014-06-01

    Purpose: To compare different approaches for Internal Target Volume (ITV) delineation for patients treated with fiducial-free robotic radiosurgery for primary and metastatic lung tumors. Methods: Ten patients undergoing Lung-Optimized Treatment (LOT) for robotic radiosurgery were imaged with inhale and exhale breath-hold CT scans and 8-phase 4DCT scan. We evaluated the differences in internal target volume (ITV) delineated using three approaches: 1) maximum intensity projection (MIP) images reconstructed from 4DCT scan (ITV-MIP); 2) linear interpolation of Gross Tumor Volumes (GTV) segmented on inhale and exhale breath-hold scans (ITV-BH); 3) linear interpolation of GTV segmented on inhale and exhale phases of 4DCT scan (ITV-2Phase). All contours were independently generated by the same radiation oncologist using lung window settings. Patients had ITV-MIP volumes ranging from 1.5 to 146.9 cc (mean 36.8 cc) located in various parts of the lung. Volume overlap and matching index (MI) were calculated and compared. The MI between two volumes was defined as the ratio of their intersection to their union. MI of 1 indicates the volumes are identical; MI of 0 indicates that there is no overlap. Results: The three approaches generated very different results. The average (SD) MI for ITV-MIP and ITV-BH was 0.52 (0.24); for ITV-MIP and ITV-2Phase it was 0.69 (0.13); and for ITV-BH and ITV-2Phase was 0.57 (0.21), (ANOVA, p=0.16). Relative to the ITV-MIP, the percentage of volume overlap was 72% (26%) and 90% (7%) for ITV-BH and ITV-2Phase, respectively (t-test, p=0.05). Conclusion: Differences between ITV-BH and ITV-MIP are due to inconsistent lung filling at breath-hold and nonlinear tumor motion. Therefore, methods to check breath-hold scanning against regular patient breathing patterns should be developed. Whenever possible, ITV-BH generated by the LOT workflow should be verified by 4DCT data.

  11. Comparative Analysis of the Post-Lumpectomy Target Volume Versus the Use of Pre-Lumpectomy Tumor Volume for Early-Stage Breast Cancer: Implications for the Future

    SciTech Connect

    Nichols, Elizabeth M.; Dhople, Anil A.; Mohiuddin, Majid M.; Flannery, Todd W.; Yu, Cedric X.; Regine, William F.

    2010-05-01

    Purpose: Three-dimensional conformal accelerated partial breast irradiation (APBI-3D-CRT) is commonly associated with the treatment of large amounts of normal breast tissue. We hypothesized that a planning tumor volume (PTV) generation based on an expansion of the pre-lumpectomy (pre-LPC) intact tumor volume would result in smaller volumes of irradiated normal breast tissue compared with using a PTV based on the post-lumpectomy cavity (post-LPC). Use of PTVs based on the pre-LPC might also result in greater patient eligibility for APBI-3D-CRT. Methods and Materials: Forty-one early-stage breast cancers were analyzed. Preoperative imaging was used to determine a pre-LPC tumor volume. PTVs were developed in the pre- and post-LPC settings as per National Surgical Breast and Bowel Project (NSABP)-B39 guidelines. The pre- and post-LPC PTV volumes were compared and eligibility for APBI-3D-CRT determined using NSABP-B39 criteria. Results: The post-LPC PTV exceeded the pre-LPC PTV in all cases. The median volume for the pre- and post-LPC PTVs were 93 cm{sup 3} (range, 24-570 cm{sup 3}) and 250 cm{sup 3} (range, 45-879 cm{sup 3}), respectively, p <0.001. The difference between pre- and post-LPC PTVs represented a median of 165 cc (range, 21-482 cc) or 16% (range, 3%-42%) of the whole breast volume. Three of 41 vs. 13 of 41 cases were ineligible for APBI-3D-CRT when using the pre- and post-LPC PTVs, respectively. Conclusion: PTVs based on pre-LPC tumor expansion are likely associated with reduced amounts of irradiated normal breast tissue compared with post-LPC PTVs, possibly leading to greater patient eligibility for APBI-3D-CRT. These findings support future investigation as to the feasibility of neoadjuvant APBI-3D-CRT.

  12. Development of deployable structures for large space platform systems. Volume 1: Executive summary

    NASA Technical Reports Server (NTRS)

    Cox, R. L.; Nelson, R. A.

    1983-01-01

    Candidate deployable linear platform system concepts suitable for development to technology readiness by 1986 are reviewed. The systems concepts were based on trades of alternate deployable/retractable structure concepts, integration of utilities, and interface approaches for docking and assembly of payloads and subsystems. The deployable volume studies involved generation of concepts for deployable volumes which could be used as unpressurized or pressurized hangars, habitats and interconnecting tunnels. Concept generation emphasized using flexible materials and deployable truss structure technology.

  13. Large-Scale Chemical Similarity Networks for Target Profiling of Compounds Identified in Cell-Based Chemical Screens

    PubMed Central

    Lo, Yu-Chen; Senese, Silvia; Li, Chien-Ming; Hu, Qiyang; Huang, Yong; Damoiseaux, Robert; Torres, Jorge Z.

    2015-01-01

    Target identification is one of the most critical steps following cell-based phenotypic chemical screens aimed at identifying compounds with potential uses in cell biology and for developing novel disease therapies. Current in silico target identification methods, including chemical similarity database searches, are limited to single or sequential ligand analysis that have limited capabilities for accurate deconvolution of a large number of compounds with diverse chemical structures. Here, we present CSNAP (Chemical Similarity Network Analysis Pulldown), a new computational target identification method that utilizes chemical similarity networks for large-scale chemotype (consensus chemical pattern) recognition and drug target profiling. Our benchmark study showed that CSNAP can achieve an overall higher accuracy (>80%) of target prediction with respect to representative chemotypes in large (>200) compound sets, in comparison to the SEA approach (60–70%). Additionally, CSNAP is capable of integrating with biological knowledge-based databases (Uniprot, GO) and high-throughput biology platforms (proteomic, genetic, etc) for system-wise drug target validation. To demonstrate the utility of the CSNAP approach, we combined CSNAP's target prediction with experimental ligand evaluation to identify the major mitotic targets of hit compounds from a cell-based chemical screen and we highlight novel compounds targeting microtubules, an important cancer therapeutic target. The CSNAP method is freely available and can be accessed from the CSNAP web server (http://services.mbi.ucla.edu/CSNAP/). PMID:25826798

  14. Associations Between IQ, Total and Regional Brain Volumes and Demography in a Large Normative Sample of Healthy Children and Adolescents

    PubMed Central

    Lange, Nicholas; Froimowitz, Michael P.; Bigler, Erin D.; Lainhart, Janet E.

    2010-01-01

    In the course of efforts to establish quantitative MRI-based norms for healthy brain development (Brain Development Cooperative Group, 2006), previously unreported associations of parental education and temporal and frontal lobe volumes with full scale IQ and its verbal and performance subscales were discovered. Our findings were derived from the largest, most representative MRI sample to date of healthy children and adolescents, ages 4 years 10 months to 18 years 4 months. We first find that parental education has a strong association with IQ in children that is not mediated by total or regional brain volumes. Second, we find that our observed associations between temporal gray matter, temporal white matter and frontal white matter volumes with full scale IQ, between 0.14 to 0.27 in children and adolescents, are due in large part to their correlations with performance IQ and not verbal IQ. The volumes of other lobar gray and white matter, subcortical gray matter (thalamus, caudate nucleus, putamen and globus pallidus), cerebellum and brainstem do not contribute significantly to IQ variation. Third, we find that head circumference is an insufficient index of cerebral volume in typically developing older children and adolescents. The relations between total and regional brain volumes and IQ can best be discerned when additional variables known to be associated with IQ, especially parental education and other demographic measures, are considered concurrently. PMID:20446134

  15. Short Communication: Conformal Therapy for Peri-Ventricular Brain Tumors: Is Target Volume Deformation an Issue?

    SciTech Connect

    Bauman, Glenn Woodford, Curtis; Yartsev, Slav

    2008-04-01

    Physiologic variations in ventricular volumes could have important implications for treating patients with peri-ventricular brain tumors, yet no data exist in the literature addressing this issue. Daily megavoltage computed tomography (CT) scans in a patient with neurocytoma receiving fractionated radiation revealed minimal changes, suggesting that margins accounting for ventricular deformation are not necessary.

  16. Target Volume Delineation in Dynamic Positron Emission Tomography Based on Time Activity Curve Differences

    NASA Astrophysics Data System (ADS)

    Teymurazyan, Artur

    Tumor volume delineation plays a critical role in radiation treatment planning and simulation, since inaccurately defined treatment volumes may lead to the overdosing of normal surrounding structures and potentially missing the cancerous tissue. However, the imaging modality almost exclusively used to determine tumor volumes, X-ray Computed Tomography (CT), does not readily exhibit a distinction between cancerous and normal tissue. It has been shown that CT data augmented with PET can improve radiation treatment plans by providing functional information not available otherwise. Presently, static PET scans account for the majority of procedures performed in clinical practice. In the radiation therapy (RT) setting, these scans are visually inspected by a radiation oncologist for the purpose of tumor volume delineation. This approach, however, often results in significant interobserver variability when comparing contours drawn by different experts on the same PET/CT data sets. For this reason, a search for more objective contouring approaches is underway. The major drawback of conventional tumor delineation in static PET images is the fact that two neighboring voxels of the same intensity can exhibit markedly different overall dynamics. Therefore, equal intensity voxels in a static analysis of a PET image may be falsely classified as belonging to the same tissue. Dynamic PET allows the evaluation of image data in the temporal domain, which often describes specific biochemical properties of the imaged tissues. Analysis of dynamic PET data can be used to improve classification of the imaged volume into cancerous and normal tissue. In this thesis we present a novel tumor volume delineation approach (Single Seed Region Growing algorithm in 4D (dynamic) PET or SSRG/4D-PET) in dynamic PET based on TAC (Time Activity Curve) differences. A partially-supervised approach is pursued in order to allow an expert reader to utilize the information available from other imaging

  17. Determination of Internal Target Volume From a Single Positron Emission Tomography/Computed Tomography Scan in Lung Cancer

    SciTech Connect

    Chang Guoping; Chang Tingting; Pan Tinsu; Clark, John W.; Mawlawi, Osama R.

    2012-05-01

    Purpose: The use of four-dimensional computed tomography (4D-CT) to determine the tumor internal target volume (ITV) is usually characterized by high patient radiation exposure. The objective of this study was to propose and evaluate an approach that relies on a single static positron emission tomography (PET)/CT scan to determine the ITV, thereby eliminating the need for 4D-CT and thus reduce patient radiation dose. Methods and Materials: The proposed approach is based on the concept that the observed PET image is the result of a joint convolution of an ideal PET image (free from motion and partial volume effect) with a motion-blurring kernel (MBK) and partial volume effect. In this regard, the MBK and tumor ITV are then estimated from the deconvolution of this joint model. To test this technique, phantom and patient studies were performed using different sphere/tumor sizes and motion trajectories. In all studies, a 4D-CT and a PET/CT image of the sphere/tumor were acquired. The ITV from the proposed technique was then compared to the maximum intensity projection (MIP) volume of the 4D-CT images. A Dice coefficient of the two volumes was calculated to represent the similarity between the two ITVs. Results: The average ITVs of the proposed technique were 97.2% {+-} 0.3% and 81.0% {+-} 16.7% similar to the MIP volume in the phantom and patient studies, respectively. The average dice coefficients were 0.87 {+-} 0.05 and 0.73 {+-} 0.16, respectively, for the two studies. Conclusion: Using the proposed approach, a single static PET/CT scan has the potential to replace a 4D-CT to determine the tumor ITV. This approach has the added advantage of reducing patient radiation exposure and determining the tumor MBK compared to 4D-CT/MIP-CT.

  18. Impact of 7-TeV/c large hadron collider proton beam on a copper target

    NASA Astrophysics Data System (ADS)

    Tahir, N. A.; Goddard, B.; Kain, V.; Schmidt, R.; Shutov, A.; Lomonosov, I. V.; Piriz, A. R.; Temporal, M.; Hoffmann, D. H. H.; Fortov, V. E.

    2005-04-01

    The large hadron collider (LHC) will allow for collision between two 7TeV/c proton beams, each comprising 2808 bunches with 1.1×1011 protons per bunch, traveling in opposite direction. The bunch length is 0.5ns and two neighboring bunches are separated by 25ns so that the duration of the entire beam is about 89μs. The beam power profile in the transverse direction is a Gaussian with a standard deviation of 0.2mm. The energy stored in each beam is about 350MJ that is sufficient to melt 500kg of copper. In case of a failure in the machine protection systems, the entire beam could impact directly onto an accelerator equipment. A first estimate of the scale of damage resulting from such a failure has been assessed for a solid copper target hit by the beam by carrying out three-dimensional energy deposition calculations and two-dimensional numerical simulations of the hydrodynamic and thermodynamic response of the target. This work has shown that the penetration depth of the LHC protons will be between 10 and 40m in solid copper. These calculations show that material conditions obtained in the target are similar to those planned for beam impact at dedicated accelerators designed to study the physics of high-energy-density states of matter, for example, the Facility for Antiprotons and Ion Research at the Gesellschaft für Schwerionenforschung, Darmstadt [W. F. Henning, Nucl. Instrum Methods Phys. Res. B 214, 211 (2004)].

  19. Targeting the Large Subunit of Human Ribonucleotide Reductase for Cancer Chemotherapy

    PubMed Central

    Wijerathna, Sanath R.; Ahmad, Md. Faiz; Xu, Hai; Fairman, James W.; Zhang, Andrew; Kaushal, Prem Singh; Wan, Qun; Kiser, Jianying; Dealwis, Chris G.

    2011-01-01

    Ribonucleotide reductase (RR) is a crucial enzyme in de novo DNA synthesis, where it catalyses the rate determining step of dNTP synthesis. RRs consist of a large subunit called RR1 (α), that contains two allosteric sites and one catalytic site, and a small subunit called RR2 (β), which houses a tyrosyl free radical essential for initiating catalysis. The active form of mammalian RR is an αnβm hetero oligomer. RR inhibitors are cytotoxic to proliferating cancer cells. In this brief review we will discuss the three classes of RR, the catalytic mechanism of RR, the regulation of the dNTP pool, the substrate selection, the allosteric activation, inactivation by ATP and dATP, and the nucleoside drugs that target RR. We will also discuss possible strategies for developing a new class of drugs that disrupts the RR assembly. PMID:23115527

  20. Targeting Atmospheric Simulation Algorithms for Large Distributed Memory GPU Accelerated Computers

    SciTech Connect

    Norman, Matthew R

    2013-01-01

    Computing platforms are increasingly moving to accelerated architectures, and here we deal particularly with GPUs. In [15], a method was developed for atmospheric simulation to improve efficiency on large distributed memory machines by reducing communication demand and increasing the time step. Here, we improve upon this method to further target GPU accelerated platforms by reducing GPU memory accesses, removing a synchronization point, and better clustering computations. The modification ran over two times faster in some cases even though more computations were required, demonstrating the merit of improving memory handling on the GPU. Furthermore, we discover that the modification also has a near 100% hit rate in fast on-chip L1 cache and discuss the reasons for this. In concluding, we remark on further potential improvements to GPU efficiency.

  1. Pathophysiological significance and therapeutic targeting of germinal center kinase in diffuse large B-cell lymphoma.

    PubMed

    Matthews, Julie Marie; Bhatt, Shruti; Patricelli, Matthew P; Nomanbhoy, Tyzoon K; Jiang, Xiaoyu; Natkunam, Yasodha; Gentles, Andrew J; Martinez, Ezequiel; Zhu, Daxing; Chapman, Jennifer Rose; Cortizas, Elena; Shyam, Ragini; Chinichian, Shideh; Advani, Ranjana; Tan, Li; Zhang, Jianming; Choi, Hwan Geun; Tibshirani, Robert; Buhrlage, Sara J; Gratzinger, Dita; Verdun, Ramiro; Gray, Nathanael S; Lossos, Izidore S

    2016-07-14

    Diffuse large B-cell lymphoma (DLBCL) is the most common subtype of non-Hodgkin lymphoma, yet 40% to 50% of patients will eventually succumb to their disease, demonstrating a pressing need for novel therapeutic options. Gene expression profiling has identified messenger RNAs that lead to transformation, but critical events transforming cells are normally executed by kinases. Therefore, we hypothesized that previously unrecognized kinases may contribute to DLBCL pathogenesis. We performed the first comprehensive analysis of global kinase activity in DLBCL, to identify novel therapeutic targets, and discovered that germinal center kinase (GCK) was extensively activated. GCK RNA interference and small molecule inhibition induced cell-cycle arrest and apoptosis in DLBCL cell lines and primary tumors in vitro and decreased the tumor growth rate in vivo, resulting in a significantly extended lifespan of mice bearing DLBCL xenografts. GCK expression was also linked to adverse clinical outcome in a cohort of 151 primary DLBCL patients. These studies demonstrate, for the first time, that GCK is a molecular therapeutic target in DLBCL tumors and that inhibiting GCK may significantly extend DLBCL patient survival. Because the majority of DLBCL tumors (∼80%) exhibit activation of GCK, this therapy may be applicable to most patients. PMID:27151888

  2. Large-scale 3D simulations of ICF and HEDP targets

    NASA Astrophysics Data System (ADS)

    Marinak, Michael M.

    2000-10-01

    The radiation hydrodynamics code HYDRA continues to be developed and applied to 3D simulations of a variety of targets for both inertial confinement fusion (ICF) and high energy density physics. Several packages have been added enabling this code to perform ICF target simulations with similar accuracy as two-dimensional codes of long-time historical use. These include a laser ray trace and deposition package, a heavy ion deposition package, implicit Monte Carlo photonics, and non-LTE opacities, derived from XSN or the linearized response matrix approach.(R. More, T. Kato, Phys. Rev. Lett. 81, 814 (1998), S. Libby, F. Graziani, R. More, T. Kato, Proceedings of the 13th International Conference on Laser Interactions and Related Plasma Phenomena, (AIP, New York, 1997).) LTE opacities can also be calculated for arbitrary mixtures online by combining tabular values generated by different opacity codes. Thermonuclear burn, charged particle transport, neutron energy deposition, electron-ion coupling and conduction, and multigroup radiation diffusion packages are also installed. HYDRA can employ ALE hydrodynamics; a number of grid motion algorithms are available. Multi-material flows are resolved using material interface reconstruction. Results from large-scale simulations run on up to 1680 processors, using a combination of massively parallel processing and symmetric multiprocessing, will be described. A large solid angle simulation of Rayleigh-Taylor instability growth in a NIF ignition capsule has resolved simultaneously the full spectrum of the most dangerous modes that grow from surface roughness. Simulations of a NIF hohlraum illuminated with the initial 96 beam configuration have also been performed. The effect of the hohlraum’s 3D intrinsic drive asymmetry on the capsule implosion will be considered. We will also discuss results from a Nova experiment in which a copper sphere is crushed by a planar shock. Several interacting hydrodynamic instabilities, including

  3. A clip-based protocol for breast boost radiotherapy provides clear target visualisation and demonstrates significant volume reduction over time

    SciTech Connect

    Lewis, Lorraine; Cox, Jennifer; Morgia, Marita; Atyeo, John; Lamoury, Gillian

    2015-09-15

    The clinical target volume (CTV) for early stage breast cancer is difficult to clearly identify on planning computed tomography (CT) scans. Surgical clips inserted around the tumour bed should help to identify the CTV, particularly if the seroma has been reabsorbed, and enable tracking of CTV changes over time. A surgical clip-based CTV delineation protocol was introduced. CTV visibility and its post-operative shrinkage pattern were assessed. The subjects were 27 early stage breast cancer patients receiving post-operative radiotherapy alone and 15 receiving post-operative chemotherapy followed by radiotherapy. The radiotherapy alone (RT/alone) group received a CT scan at median 25 days post-operatively (CT1rt) and another at 40 Gy, median 68 days (CT2rt). The chemotherapy/RT group (chemo/RT) received a CT scan at median 18 days post-operatively (CT1ch), a planning CT scan at median 126 days (CT2ch), and another at 40 Gy (CT3ch). There was no significant difference (P = 0.08) between the initial mean CTV for each cohort. The RT/alone cohort showed significant CTV volume reduction of 38.4% (P = 0.01) at 40 Gy. The Chemo/RT cohort had significantly reduced volumes between CT1ch: median 54 cm{sup 3} (4–118) and CT2ch: median 16 cm{sup 3}, (2–99), (P = 0.01), but no significant volume reduction thereafter. Surgical clips enable localisation of the post-surgical seroma for radiotherapy targeting. Most seroma shrinkage occurs early, enabling CT treatment planning to take place at 7 weeks, which is within the 9 weeks recommended to limit disease recurrence.

  4. Detection of triazole deicing additives in soil samples from airports with low, mid, and large volume aircraft deicing activities.

    PubMed

    McNeill, K S; Cancilla, D A

    2009-03-01

    Soil samples from three USA airports representing low, mid, and large volume users of aircraft deicing fluids (ADAFs) were analyzed by LC/MS/MS for the presence of triazoles, a class of corrosion inhibitors historically used in ADAFs. Triazoles, specifically the 4-methyl-1H-benzotriazole and the 5-methyl-1H-benzotriazole, were detected in a majority of samples and ranged from 2.35 to 424.19 microg/kg. Previous studies have focused primarily on ground and surface water impacts of larger volume ADAF users. The detection of triazoles in soils at low volume ADAF use airports suggests that deicing activities may have a broader environmental impact than previously considered. PMID:19082516

  5. Large-aperture broadband sapphire windows for common aperture, target acquisition, tracking, and surveillance systems

    NASA Astrophysics Data System (ADS)

    Askinazi, Joel

    1997-06-01

    State of the art optical sensing systems performing target acquisition/tracking and surveillance functions are being designed to incorporate a number of sensors into one package. These include visual and MWIR cameras, FLIRs, and laser range finders. These combined systems are being configured to view through a common aperture window. Typical window diameters are to eleven inches, but some surveillance applications have windows approaching twenty inches in diameter. These sensor windows typically operate in hostile environments including very high pressure differentials, large thermal gradients, and severe rain and sand abrasion. EMI/EMC protection and de-icing capabilities are also commonly required. For airborne applications and to minimize thermal gradients, thinner, lightweight, high strength windows are also necessary. Sapphire is an ideal window material to satisfy these requirements due to its high strength, UV-MWIR bandpass, minimal optical scatter, excellent index of refraction homogeneity and very high scratch/impact resistance. Associated optical fabrication, grid lithography and optical coating processes have been developed at Hughes Danbury for sapphire windows. This paper addresses the development of a family of large aperture, broadband sapphire windows which also provide EMI/EMC protection and de-icing capabilities. The resulting design configuration and performance characteristics are also addressed. Future technology development requirements are also discussed.

  6. Toxicity assessment for RMA target contaminants. Volume 1. Endangerment assessment RMA, task 35. Final draft report

    SciTech Connect

    1987-06-01

    This report is detailed discussion of the evaluations performed to develop the toxicity assessment for RMA contaminants in soil. The objectives of the toxicity assessment are to determine the nature and extent of health and environmental hazards associated with exposure to contaminants present at the site and identify a quantitative index of toxicity for each target contaminant, referred to in this assessment as DT. The toxicity assessment for the RMA target contaminants has been performed consistent with published EPA guidelines and addresses only human health hazards associated with contaminants in soil. Each toxicity profile is composed of seven sections: 1. summary; 2. chemical and physical properties; and 3. transport and rate.

  7. Nonthermal ablation of deep brain targets: A simulation study on a large animal model

    PubMed Central

    Top, Can Barış; White, P. Jason; McDannold, Nathan J.

    2016-01-01

    Purpose: Thermal ablation with transcranial MRI-guided focused ultrasound (FUS) is currently limited to central brain targets because of heating and other beam effects caused by the presence of the skull. Recently, it was shown that it is possible to ablate tissues without depositing thermal energy by driving intravenously administered microbubbles to inertial cavitation using low-duty-cycle burst sonications. A recent study demonstrated that this ablation method could ablate tissue volumes near the skull base in nonhuman primates without thermally damaging the nearby bone. However, blood–brain disruption was observed in the prefocal region, and in some cases, this region contained small areas of tissue damage. The objective of this study was to analyze the experimental model with simulations and to interpret the cause of these effects. Methods: The authors simulated prior experiments where nonthermal ablation was performed in the brain in anesthetized rhesus macaques using a 220 kHz clinical prototype transcranial MRI-guided FUS system. Low-duty-cycle sonications were applied at deep brain targets with the ultrasound contrast agent Definity. For simulations, a 3D pseudospectral finite difference time domain tool was used. The effects of shear mode conversion, focal steering, skull aberrations, nonlinear propagation, and the presence of skull base on the pressure field were investigated using acoustic and elastic wave propagation models. Results: The simulation results were in agreement with the experimental findings in the prefocal region. In the postfocal region, however, side lobes were predicted by the simulations, but no effects were evident in the experiments. The main beam was not affected by the different simulated scenarios except for a shift of about 1 mm in peak position due to skull aberrations. However, the authors observed differences in the volume, amplitude, and distribution of the side lobes. In the experiments, a single element passive

  8. Dual-domain microchip-based process for volume reduction solid phase extraction of nucleic acids from dilute, large volume biological samples.

    PubMed

    Reedy, Carmen R; Hagan, Kristin A; Strachan, Briony C; Higginson, Joshua J; Bienvenue, Joan M; Greenspoon, Susan A; Ferrance, Jerome P; Landers, James P

    2010-07-01

    A microfluidic device was developed to carry out integrated volume reduction and purification of nucleic acids from dilute, large volume biological samples commonly encountered in forensic genetic analysis. The dual-phase device seamlessly integrates two orthogonal solid-phase extraction (SPE) processes, a silica solid phase using chaotrope-driven binding and an ion exchange phase using totally aqueous chemistry (chitosan phase), providing the unique capability of removing polymerase chain reaction (PCR) inhibitors used in silica-based extractions (guanidine and isopropanol). Nucleic acids from a large volume sample are shown to undergo a substantial volume reduction on the silica phase, followed by a more stringent extraction on the chitosan phase. The key to interfacing the two steps is mixing of the eluted nucleic acids from the first phase with loading buffer which is facilitated by flow-mediated mixing over a herringbone mixing region in the device. The complete aqueous chemistry associated with the second purification step yields a highly concentrated PCR-ready eluate of nucleic acids devoid of PCR inhibitors that are reagent-based (isopropanol) and sample-based (indigo dye), both of which are shown to be successfully removed using the dual-phase device but not by the traditional microfluidic SPE (muSPE). The utility of the device for purifying DNA was demonstrated with dilute whole blood, dilute semen, a semen stain, and a blood sample inhibited with indigo dye, with the resultant DNA from all shown to be PCR amplifiable. The same samples purified using muSPE were not all PCR amplifiable due to a smaller concentration of the DNA and the lack of PCR-compatible aqueous chemistry in the extraction method. The utility of the device for the purification of RNA was also demonstrated, by the extraction of RNA from a dilute semen sample, with the resulting RNA amplified using reverse transcription (RT)-PCR. The vrSPE-SPE device reliably yields a volume reduction for

  9. Development of deployable structures for large space platforms. Volume 2: Design development

    NASA Technical Reports Server (NTRS)

    Greenberg, H. S.

    1983-01-01

    Design evolution, test article design, test article mass properties, and structural analysis of deployable platform systems are discussed. Orbit transfer vehicle (OTV) hangar development, OTV hangar concept selection, and manned module development are discussed. Deployable platform systems requirements, material data base, technology development needs, concept selection and deployable volume enclosures are also discussed.

  10. COMPARISON OF TWO DIFFERENT SOLID PHASE EXTRACTION/LARGE VOLUME INJECTION PROCEDURES FOR METHOD 8270

    EPA Science Inventory

    Two solid phase (SPE) and one traditional continuous liquid-liquid extraction method are compared for analysis of Method 8270 SVOCs. Productivity parameters include data quality, sample volume, analysis time and solvent waste.

    One SPE system, unique in the U.S., uses aut...

  11. Internal target volume determined with expansion margins beyond composite gross tumor volume in three-dimensional conformal radiotherapy for lung cancer

    SciTech Connect

    Shih, Helen A.; Jiang, Steve B.; Aljarrah, Khaled M.; Doppke, Karen P.; Choi, Noah C. . E-mail: nchoi@partners.org

    2004-10-01

    Purpose: Gross tumor volume (GTV) of lung cancer defined by fast helical CT scan represents an image of moving tumor captured at a point in active respiratory movement. However, the method for defining internal margins beyond GTV to account for its expected physiologic movement and all variations in size and shape during the administration of radiation has not been established. The goal of this study was to determine the internal margins with expansion margins beyond individual GTVs defined with (1) fast scan at shallow free breathing (2) breath-hold scans at the end of tidal volume inspiration and expiration, and (3) 4-s slow scan to approximate the composite GTV of all scans. Methods and materials: A series of sequential CT scans were acquired with (1) a fast helical scan at shallow free breathing and (2) breath-hold scans at the end of tidal volume expiration and inspiration for the first 6 patients, and (3) a 4-s slow scan at quiet free breathing, which was added for the latter 7 patients. We fused breath-hold scans and the 4-s slow scan to the fast scan at shallow free breathing to generate the composite GTV. Margins necessary to encompass the composite GTV beyond individual GTVs defined by either fast scan at quiet free breathing, breath-hold scans, or the 4-s slow scan at quiet free breathing were defined as expansion or internal margins and termed the internal target volumes. The centroid of the tumor volume was also used as another reference for tumor movement. Results: Thirteen patients with 14 tumors were enrolled into the study. Substantial tumor movement was noted by either the extent of internal margins beyond each GTV or the movement of the centroid. Internal margins varied significantly according to the method of CT scanning for determination of GTV. Even for tumors in the same lobe of the lung, a wide range of internal margins and significant variation in the centroid movement in all directions (x, y, and z) were observed. The GTV of a single fast

  12. Fabrics, Facies And Flow Through A Large-Volume Ignimbrite: Pampa De Oxaya, Chile.

    NASA Astrophysics Data System (ADS)

    Platzman, Ellen; Cooper, Frances

    2016-04-01

    Large volume pyroclastic currents form during some of the most destructive volcanic eruptions on the planet, yet because they are underrepresented in the geological record they remain poorly understood. The Miocene Oxaya ignimbrites, exposed along the western Andean slopes in northern Chile, form one of the largest ignimbrite provinces on earth. We use anisotropy of magnetic susceptibility (AMS) in conjunction with rock magnetic measurements to investigate flow behavior and depositional processes in one of the largest members of the Oxaya succession, the Cardones ignimbrite. Despite its prominence the location of the source caldera remains unknown and fundamental processes remain poorly constrained. During 2012 nearly 8km (7,773m) of core was recovered from the early Miocene ignimbrites in 11 holes at elevations ranging from 2336m to 3805m along the Andean escarpment east of Arica, Chile. The drill cores are remarkable in that they penetrate through the entirety of the ignimbrite sequence and into the basement below. Samples for this study were collected from a > 1 km long core drilled at an altitude 3692m. The core sampled 981 m of Cardones ignimbrite and 15 m of underlying sediments and volcaniclastics before penetrating 148 m of basement. Detailed measurements of the variation in bulk magnetic properties including natural remanent magnetization (NRM), susceptibility, ARM, and IRM, were used to monitor changes in concentration, composition and grainsize of the magnetic components though the ignimbrite. AMS in conjunction with detailed rock magnetic measurements were used to constrain flow processes. The data reveal a well-defined flow direction and systematic variations in flow processes with depth. Low field bulk magnetic susceptibility averages 3.2x10-3 SI. Rock magnetic studies and petrographic examination indicate that magnetite is likely to be the dominant magnetic phase although paramagnetic mineral phases also contribute to the magnetic fabric. The degree

  13. Quantification and Minimization of Uncertainties of Internal Target Volume for Stereotactic Body Radiation Therapy of Lung Cancer

    SciTech Connect

    Ge Hong; Cai Jing; Kelsey, Chris R.; Yin Fangfang

    2013-02-01

    Purpose: To quantify uncertainties in delineating an internal target volume (ITV) and to understand how these uncertainties may be individually minimized for stereotactic body radiation therapy (SBRT) of early stage non-small cell lung cancer (NSCLC). Methods and Materials: Twenty patients with NSCLC who were undergoing SBRT were imaged with free-breathing 3-dimensional computed tomography (3DCT) and 10-phase 4-dimensional CT (4DCT) for delineating gross tumor volume (GTV){sub 3D} and ITV{sub 10Phase} (ITV3). The maximum intensity projection (MIP) CT was also calculated from 10-phase 4DCT for contouring ITV{sub MIP} (ITV1). Then, ITV{sub COMB} (ITV2), ITV{sub 10Phase+GTV3D} (ITV4), and ITV{sub 10Phase+ITVCOMB} (ITV5) were generated by combining ITV{sub MIP} and GTV{sub 3D}, ITV{sub 10phase} and GTV{sub 3D}, and ITV{sub 10phase} and ITV{sub COMB}, respectively. All 6 volumes (GTV{sub 3D} and ITV1 to ITV5) were delineated in the same lung window by the same radiation oncologist. The percentage of volume difference (PVD) between any 2 different volumes was determined and was correlated to effective tumor diameter (ETD), tumor motion ranges, R{sub 3D}, and the amplitude variability of the recorded breathing signal (v) to assess their volume variations. Results: The mean (range) tumor motion (R{sub SI}, R{sub AP}, R{sub ML}, and R{sub 3D}) and breathing variability (v) were 7.6 mm (2-18 mm), 4.0 mm (2-8 mm), 3.3 mm (0-7.5 mm), 9.9 mm (4.1-18.7 mm), and 0.17 (0.07-0.37), respectively. The trend of volume variation was GTV{sub 3D} volumes were 11.1 {+-} 9.3 cc, 13.2 {+-} 10.5 cc, 14.9 {+-} 11.0 cc, 14.7 {+-} 11.4 cc, 15.9 {+-} 11.7 cc, and 16.4 {+-} 11.8 cc, respectively. All comparisons between the target volumes showed statistical significance (P{<=}.001), except for ITV2 and ITV3 (P=.594). The PVDs for all volume pairs correlated negatively with ETD (r{<=}-0.658, P{<=}.006) and positively with

  14. Pre-caldera forming pyroclastic deposits: Implications for the origin of the large volume Rainier Mesa ash-flow sheet

    SciTech Connect

    Huysken, K.T.; Vogel, T.A. . Dept. of Geological Sciences)

    1992-01-01

    Small ash-flow layers directly underlying the voluminous Rainier Mesa ash-flow sheet are chemically equivalent to the overlying ash-flow. However, chemical variability of these precaldera-collapse pyroclastic deposits indicates they could not have erupted from the large volume Rainier Mesa Member (RMM) magma body. The RMM is a voluminous chemically and mineralogically layered and zoned ash-flow sheet. Directly underlying the RMM is a sequence of tephra-fall deposits interbedded with thin ash-flow layers, traditionally interpreted as pre-caldera-collapse deposits from the large magma body. Chemical comparison of 14 thin flows with the overlying RMM was made in order to decipher the relationship between earlier erupted ash-flow layers and the large ash-flow sheet. Within each thin ash-flow layer, there is substantial variation in major, trace, and REE concentrations over a thickness of only 0.5 to 5 m. The extremely small volume of pre-Rainier Mesa ash-flow layers would represent a negligible volume of the magma body. The observed chemical zoning would not occur if these small volume deposits erupted from the RMM magma body. Major and trace element variation among the small ash-flow layers spans that of the entire high-silica portion of the RMM ash-flow sheet, which makes up 90% of the total volume of the ash-flow. Moreover, REE concentrations among the thin ash-flow layers are as variable as the REE concentrations of the entire overlying ash-flow sheet. Because there is significant chemical variation both within and among small ash-flow layers underlying the RMM, the authors reject the possibility of a larger differentiating magma body as the source of the small pre-Rainier ash-flow layers.

  15. A Distributed GPU-Based Framework for Real-Time 3D Volume Rendering of Large Astronomical Data Cubes

    NASA Astrophysics Data System (ADS)

    Hassan, A. H.; Fluke, C. J.; Barnes, D. G.

    2012-05-01

    We present a framework to volume-render three-dimensional data cubes interactively using distributed ray-casting and volume-bricking over a cluster of workstations powered by one or more graphics processing units (GPUs) and a multi-core central processing unit (CPU). The main design target for this framework is to provide an in-core visualization solution able to provide three-dimensional interactive views of terabyte-sized data cubes. We tested the presented framework using a computing cluster comprising 64 nodes with a total of 128GPUs. The framework proved to be scalable to render a 204GB data cube with an average of 30 frames per second. Our performance analyses also compare the use of NVIDIA Tesla 1060 and 2050GPU architectures and the effect of increasing the visualization output resolution on the rendering performance. Although our initial focus, as shown in the examples presented in this work, is volume rendering of spectral data cubes from radio astronomy, we contend that our approach has applicability to other disciplines where close to real-time volume rendering of terabyte-order three-dimensional data sets is a requirement.

  16. Determination of Internal Target Volume for Radiation Treatment Planning of Esophageal Cancer by Using 4-Dimensional Computed Tomography (4DCT)

    SciTech Connect

    Chen, Xiaojian; Lu, Haijun; Tai, An; Johnstone, Candice; Gore, Elizabeth; Li, X. Allen

    2014-09-01

    Purpose: To determine an efficient strategy for the generation of the internal target volume (ITV) for radiation treatment planning for esophageal cancer using 4-dimensional computed tomography (4DCT). Methods and Materials: 4DCT sets acquired for 20 patients with esophageal carcinoma were analyzed. Each of the 4DCT sets was binned into 10 respiratory phases. For each patient, the gross tumor volume (GTV) was delineated on the 4DCT set at each phase. Various strategies to derive ITV were explored, including the volume from the maximum intensity projection (MIP; ITV{sub M}IP), unions of the GTVs from selected multiple phases ITV2 (0% and 50% phases), ITV3 (ITV2 plus 80%), and ITV4 (ITV3 plus 60%), as well as the volumes expanded from ITV2 and ITV3 with a uniform margin. These ITVs were compared to ITV10 (the union of the GTVs for all 10 phases) and the differences were measured with the overlap ratio (OR) and relative volume ratio (RVR) relative to ITV10 (ITVx/ITV10). Results: For all patients studied, the average GTV from a single phase was 84.9% of ITV10. The average ORs were 91.2%, 91.3%, 94.5%, and 96.4% for ITV{sub M}IP, ITV2, ITV3, and ITV4, respectively. Low ORs were associated with irregular breathing patterns. ITV3s plus 1 mm uniform margins (ITV3+1) led to an average OR of 98.1% and an average RVR of 106.4%. Conclusions: The ITV generated directly from MIP underestimates the range of the respiration motion for esophageal cancer. The ITV generated from 3 phases (ITV3) may be used for regular breathers, whereas the ITV generated from 4 phases (ITV4) or ITV3 plus a 1-mm uniform margin may be applied for irregular breathers.

  17. Microspheres targeted with a mesothelin antibody and loaded with doxorubicin reduce tumor volume of human mesotheliomas in xenografts

    PubMed Central

    2013-01-01

    Background Malignant mesotheliomas (MMs) are chemoresistant tumors related to exposure to asbestos fibers. The long latency period of MM (30-40 yrs) and heterogeneity of tumor presentation make MM difficult to diagnose and treat at early stages. Currently approved second-line treatments following surgical resection of MMs include a combination of cisplatin or carboplatin (delivered systemically) and pemetrexed, a folate inhibitor, with or without subsequent radiation. The systemic toxicities of these treatments emphasize the need for more effective, localized treatment regimens. Methods Acid-prepared mesoporous silica (APMS) microparticles were loaded with doxorubicin (DOX) and modified externally with a mesothelin (MB) specific antibody before repeated intraperitoneal (IP) injections into a mouse xenograft model of human peritoneal MM. The health/weight of mice, tumor volume/weight, tumor necrosis and cell proliferation were evaluated in tumor-bearing mice receiving saline, DOX high (0.2 mg/kg), DOX low (0.05 mg/kg), APMS-MB, or APMS-MB-DOX (0.05 mg/kg) in saline. Results Targeted therapy (APMS-MB-DOX at 0.05 mg/kg) was more effective than DOX low (0.05 mg/kg) and less toxic than treatment with DOX high (0.2 mg/kg). It also resulted in the reduction of tumor volume without loss of animal health and weight, and significantly decreased tumor cell proliferation. High pressure liquid chromatography (HPLC) of tumor tissue confirmed that APMS-MB-DOX particles delivered DOX to target tissue. Conclusions Data suggest that targeted therapy results in greater chemotherapeutic efficacy with fewer adverse side effects than administration of DOX alone. Targeted microparticles are an attractive option for localized drug delivery. PMID:24024776

  18. Development of whole-building energy design targets for commercial buildings: Phase 1, Planning: Volume 2, Technical report

    SciTech Connect

    Crawley, D.B.; Briggs, R.S.; Jones, J.W.; Seaton, W.W.; Kaufman, J.E.; Deringer, J.J.; Kennett, E.W.

    1987-08-01

    This is the second volume of the Phase 1 report and discusses the 10 tasks performed in Phase 1. The objective of this research is to develop a methodology for setting energy design targets to provide voluntary guidelines for the buildings industry. The whole-building energy targets project is being conducted at the Pacific Northwest Laboratory (PNL) for the US Department of Energy (DOE) to encourage the construction of energy-efficient buildings by informing designers and owners about cost-effective goals for energy use in new commercial buildings. The outcome of this research will be a flexible methodology for setting such targets. The tasks are listed and discussed in this report as follows: Task 1 - Develop Detailed Project Goals and Objectives; Task 2 - Establish Buildings-Industry Liaison; Task 3 - Develop Approaches to the Energy Targets Model, Building Operations, and Climate; Task 4 - Develop an Approach for Treating Economic Considerations; Task 5 - Develop an Approach for Treating Energy Sources; Task 6 - Collect Energy-Use Data; Task 7 - Survey Energy Expert Opinion; Task 8 - Evaluation Procedure Specification and Integration; Task 9 - Phase 1 Report Development; and Task 10 - Phase 1 Review Planning.

  19. Effect of Bra Use during Radiotherapy for Large-Breasted Women: Acute Toxicity and Treated Heart and Lung Volumes

    PubMed Central

    Keller, Lanea; Cohen, Randi; Sopka, Dennis M; Li, Tianyu; Li, Linna; Anderson, Penny R; Fowble, Barbara L.; Freedman, Gary M

    2012-01-01

    Purpose Large breast size presents special problems during radiation simulation, planning and patient treatment, including increased skin toxicity, in women undergoing breast-conserving surgery and radiotherapy (BCT). We report our experience using a bra during radiation in large-breasted women and its effect on acute toxicity and heart and lung dosimetry. Materials and methods From 2001 to 2006, 246 consecutive large-breasted women (bra size ≥ 38 and/or ≥ D cup) were treated with BCT using either 3D conformal (3D-CRT) or Intensity Modulated Radiation (IMRT). In 58 cases, at the physicians’ discretion, a custom-fit bra was used during simulation and treatment. Endpoints were acute radiation dermatitis, and dosimetric comparison of heart and lung volumes in a subgroup of 12 left-sided breast cancer patients planned with and without a bra. Results The majority of acute skin toxicities were grade 2 and were experienced by 90% of patients in a bra compared to 70% of patients not in a bra (p=0.003). On multivariate analysis significant predictors of grade 2/3 skin toxicity included 3D-CRT instead of IMRT (OR=3.9, 95% CI:1.8-8.5) and the use of a bra (OR=5.5, 95% CI:1.6-18.8). For left-sided patients, use of a bra was associated with a volume of heart in the treatment fields decreased by 63.4% (p=0.002), a volume of left lung decreased by 18.5% (p=0.25), and chest wall separation decreased by a mean of 1 cm (p=0.03). Conclusions The use of a bra to augment breast shape and position in large-breasted women is an alternative to prone positioning and associated with reduced chest wall separation and reduced heart volume within the treatment field. PMID:23459714

  20. Melt production in large-scale impact events: Calculations of impact-melt volumes and crater scaling

    NASA Technical Reports Server (NTRS)

    Cintala, Mark J.; Grieve, Richard A. F.

    1992-01-01

    Along with an apparent convergence in estimates of impact-melt volumes produced during planetary impact events, intensive efforts at deriving scaling relationships for crater dimensions have also yielded results. It is now possible to examine a variety of phenomena associated with impact-melt production during large cratering events and apply them to planetary problems. This contribution describes a method of combining calculations of impact-melt production with crater scaling to investigate the relationship between the two.

  1. Protein 4.1-mediated membrane targeting of human discs large in epithelial cells.

    PubMed

    Hanada, Toshihiko; Takeuchi, Atsuko; Sondarva, Gautam; Chishti, Athar H

    2003-09-01

    Human discs large (hDlg) protein binds to protein 4.1R via a motif encoded by an alternatively spliced exon located between the SH3 and the C-terminal guanylate kinase-like domains. To evaluate the functional significance of protein 4.1R binding for subcellular localization of hDlg in vivo, we expressed full-length recombinant constructs of two naturally occurring isoforms of hDlg termed hDlg-I2 and hDlg-I3. The hDlg-I3 but not the hDlg-I2 isoform binds to the FERM (Four.1-Ezrin-Radixin-Moesin) domain of protein 4.1R in vitro. Upon transient transfection into subconfluent Madine-Darby canine kidney (MDCK) epithelial cells, the hDlg-I3 fused with the green fluorescent protein accumulated predominantly at the plasma membrane of cell-cell contact sites, whereas the hDlg-I2 fusion protein distributed in the cytoplasm. In contrast, in stably transfected confluent MDCK cells, both hDlg-I2 and -I3 isoforms localized efficiently to the lateral membrane, consistent with the previous notion that the N-terminal domain of hDlg mediates its membrane targeting in polarized epithelial cells. We introduced a double mutation (I38A/I40A) into the N-terminal domain of hDlg, which disrupted its interaction with DLG2, a key event in the membrane targeting of hDlg. Interestingly, the hDlg-I2 isoform harboring the I38A/I40A mutation mislocalized from the membrane into cytoplasm. Importantly, the hDlg-I3 isoform with the same mutation localized efficiently to the membrane of confluent MDCK cells. Together, our results demonstrate that in addition to the N-terminal targeting domain, the alternatively spliced I3 insertion plays a critical role in recruiting hDlg to the lateral membrane in epithelial cells via its interaction with protein 4.1R. PMID:12807908

  2. Genetic influences on schizophrenia and subcortical brain volumes: large-scale proof of concept.

    PubMed

    Franke, Barbara; Stein, Jason L; Ripke, Stephan; Anttila, Verneri; Hibar, Derrek P; van Hulzen, Kimm J E; Arias-Vasquez, Alejandro; Smoller, Jordan W; Nichols, Thomas E; Neale, Michael C; McIntosh, Andrew M; Lee, Phil; McMahon, Francis J; Meyer-Lindenberg, Andreas; Mattheisen, Manuel; Andreassen, Ole A; Gruber, Oliver; Sachdev, Perminder S; Roiz-Santiañez, Roberto; Saykin, Andrew J; Ehrlich, Stefan; Mather, Karen A; Turner, Jessica A; Schwarz, Emanuel; Thalamuthu, Anbupalam; Yao, Yin; Ho, Yvonne Y W; Martin, Nicholas G; Wright, Margaret J; O'Donovan, Michael C; Thompson, Paul M; Neale, Benjamin M; Medland, Sarah E; Sullivan, Patrick F

    2016-03-01

    Schizophrenia is a devastating psychiatric illness with high heritability. Brain structure and function differ, on average, between people with schizophrenia and healthy individuals. As common genetic associations are emerging for both schizophrenia and brain imaging phenotypes, we can now use genome-wide data to investigate genetic overlap. Here we integrated results from common variant studies of schizophrenia (33,636 cases, 43,008 controls) and volumes of several (mainly subcortical) brain structures (11,840 subjects). We did not find evidence of genetic overlap between schizophrenia risk and subcortical volume measures either at the level of common variant genetic architecture or for single genetic markers. These results provide a proof of concept (albeit based on a limited set of structural brain measures) and define a roadmap for future studies investigating the genetic covariance between structural or functional brain phenotypes and risk for psychiatric disorders. PMID:26854805

  3. Gravitational search for cryptovolcanism on the Moon: Evidence for large volumes of early igneous activity

    NASA Astrophysics Data System (ADS)

    Sori, Michael M.; Zuber, Maria T.; Head, James W.; Kiefer, Walter S.

    2016-07-01

    We define lunar cryptovolcanism as volcanic deposits on the Moon hidden by overlying material. Notably, cryptovolcanism includes both cryptomaria (subsurface extrusive basaltic deposits that are obscured by overlying higher albedo basin and crater ejecta) and earlier candidate extrusives, such as the Mg-suite. Knowledge of the volume and extent of cryptovolcanism is necessary for a comprehensive understanding of lunar volcanic history, particularly in early (pre 3.8 Ga) epochs when abundant impact craters and basins obscured surface volcanic deposits by lateral emplacement of ejecta. We use Gravity Recovery and Interior Laboratory (GRAIL) gravity and Lunar Orbiter Laser Altimeter (LOLA) topography data to construct maps of the Moon's positive Bouguer and isostatic gravity anomalies, and explore the possibility that these features are due to mass excesses associated with cryptovolcanism by cross-referencing the regions with geologic data such as dark halo craters. We model the potential cryptovolcanic deposits as buried high-density rectangular prisms at depth in the upper crust, and find a volume of candidate buried cryptovolcanism between 0.4 × 106 km3 and 4.8 × 106 km3, depending on assumptions about density and crustal compensation state. These candidate deposits correspond to a surface area of between 0.50 × 106 km2 and 1.14 × 106 km2, which would increase the amount of the lunar surface containing volcanic deposits from 16.6% to between 17.9% and 19.5%. The inferred volume of cryptovolcanism is comparable to the smallest estimates of the volume of visible mare basalts and up to ∼50% of the largest estimates; the high-resolution GRAIL and LOLA observations thus would collectively indicate that early (pre 3.8 Ga) lunar volcanism is an important element of lunar thermal evolution. Alternatively, the buried material could represent the presence of intrusive Mg-suite sills or plutons.

  4. Effect of radical prostatectomy surgeon volume on complication rates from a large population-based cohort

    PubMed Central

    Almatar, Ashraf; Wallis, Christopher J.D.; Herschorn, Sender; Saskin, Refik; Kulkarni, Girish S.; Kodama, Ronald T.; Nam, Robert K.

    2016-01-01

    Introduction: Surgical volume can affect several outcomes following radical prostatectomy (RP). We examined if surgical volume was associated with novel categories of treatment-related complications following RP. Methods: We examined a population-based cohort of men treated with RP in Ontario, Canada between 2002 and 2009. We used Cox proportional hazard modeling to examine the effect of physician, hospital and patient demographic factors on rates of treatment-related hospital admissions, urologic procedures, and open surgeries. Results: Over the study interval, 15 870 men were treated with RP. A total of 196 surgeons performed a median of 15 cases per year (range: 1–131). Patients treated by surgeons in the highest quartile of annual case volume (>39/year) had a lower risk of hospital admission (hazard ratio [HR]=0.54, 95% CI 0.47–0.61) and urologic procedures (HR=0.69, 95% CI 0.64–0.75), but not open surgeries (HR=0.83, 95% CI 0.47–1.45) than patients treated by surgeons in the lowest quartile (<15/year). Treatment at an academic hospital was associated with a decreased risk of hospitalization (HR=0.75, 95% CI 0.67–0.83), but not of urologic procedures (HR=0.94, 95% CI 0.88–1.01) or open surgeries (HR=0.87, 95% CI 0.54–1.39). There was no significant trend in any of the outcomes by population density. Conclusions: The annual case volume of the treating surgeon significantly affects a patient’s risk of requiring hospitalization or urologic procedures (excluding open surgeries) to manage treatment-related complications. PMID:26977206

  5. Toxicity assessment for RMA target contaminants. Volume 2. Endangerment assessment, RMA, task 35. Final draft report

    SciTech Connect

    1987-06-01

    This report is a detailed discussion of the evaluations performed to develop the toxicity assessment for RMA contaminants in soil. The objectives of the toxicity assessment are to: (1) determine the nature and extent of health and environmental hazards associated with exposure to contaminants present at the site and (2) identify a quantitative index of toxicity for each target contaminant, referred to in this assessment as DT. The toxicity assessment for the RMA target contaminants has been performed consistent with published EPA guidelines and addresses only human health hazards associated with contaminants in soil. Each toxicity profile is composed of seven sections: (1) summary; (2) chemical and physical properties; and (3) transport and fate.

  6. Large scale prop-fan structural design study. Volume 1: Initial concepts

    NASA Technical Reports Server (NTRS)

    Billman, L. C.; Gruska, C. J.; Ladden, R. M.; Leishman, D. K.; Turnberg, J. E.

    1988-01-01

    In recent years, considerable attention has been directed toward improving aircraft fuel consumption. Studies have shown that the inherent efficiency advantage that turboprop propulsion systems have demonstrated at lower cruise speeds may now be extended to the higher speeds of today's turbofan and turbojet-powered aircraft. To achieve this goal, new propeller designs will require features such as thin, high speed airfoils and aerodynamic sweep, features currently found only in wing designs for high speed aircraft. This is Volume 1 of a 2 volume study to establish structural concepts for such advanced propeller blades, to define their structural properties, to identify any new design, analysis, or fabrication techniques which were required, and to determine the structural tradeoffs involved with several blade shapes selected primarily on the basis of aero/acoustic design considerations. The feasibility of fabricating and testing dynamically scaled models of these blades for aeroelastic testing was also established. The preliminary design of a blade suitable for flight use in a testbed advanced turboprop was conducted and is described in Volume 2.

  7. Physics of laser fusion. Volume II. Diagnostics of experiments on laser fusion targets at LLNL

    SciTech Connect

    Ahlstrom, H.G.

    1982-01-01

    These notes present the experimental basis and status for laser fusion as developed at LLNL. There are two other volumes in this series: Vol. I, by C.E. Max, presents the theoretical laser-plasma interaction physics; Vol. III, by J.F. Holzrichter et al., presents the theory and design of high-power pulsed lasers. A fourth volume will present the theoretical implosion physics. The notes consist of six sections. The first, an introductory section, provides some of the history of inertial fusion and a simple explanation of the concepts involved. The second section presents an extensive discussion of diagnostic instrumentation used in the LLNL Laser Fusion Program. The third section is a presentation of laser facilities and capabilities at LLNL. The purpose here is to define capability, not to derive how it was obtained. The fourth and fifth sections present the experimental data on laser-plasma interaction and implosion physics. The last chapter is a short projection of the future.

  8. The optimization of intensity modulated radiotherapy in cases where the planning target volume extends into the build-up region.

    PubMed

    Nguyen, T B; Hoole, A C F; Burnet, N G; Thomas, S J

    2009-04-21

    A common clinical problem in IMRT, especially when treating head and neck cases, is that the clinical target volume (CTV) stops short of the skin surface, whilst the margin for geometric uncertainties may take the planning target volume (PTV) to the skin surface or beyond. In these cases, optimization leads to over-dosing of the skin, unless the planner resorts to procedural tricks to avoid this, such as the use of pretend bolus or reduction of the PTV followed by adding 'flash' after optimization. This paper describes a method of avoiding the need for these tricks by using a multiple-isocentre CTV-based objective function. This enables plans to be produced that will give good coverage of the CTV for all the geometrical uncertainties that would have been covered by the PTV without causing the problem of over-dosing the skin. Eight isocentre shifts, equally distributed on the surface of a sphere with a radius equal to the CTV-PTV margin, are shown to be adequate for the optimization process. The resulting fluence maps are much simpler than those resulting from PTV optimization and will therefore be simpler to deliver. The method also permits better sparing of organs at risk such as the spinal cord. PMID:19336846

  9. Elective Clinical Target Volumes for Conformal Therapy in Anorectal Cancer: A Radiation Therapy Oncology Group Consensus Panel Contouring Atlas

    SciTech Connect

    Myerson, Robert J. Garofalo, Michael C.; El Naqa, Issam; Abrams, Ross A.; Apte, Aditya; Bosch, Walter R.; Das, Prajnan; Gunderson, Leonard L.; Hong, Theodore S.; Kim, J.J. John; Willett, Christopher G.; Kachnic, Lisa A.

    2009-07-01

    Purpose: To develop a Radiation Therapy Oncology Group (RTOG) atlas of the elective clinical target volume (CTV) definitions to be used for planning pelvic intensity-modulated radiotherapy (IMRT) for anal and rectal cancers. Methods and Materials: The Gastrointestinal Committee of the RTOG established a task group (the nine physician co-authors) to develop this atlas. They responded to a questionnaire concerning three elective CTVs (CTVA: internal iliac, presacral, and perirectal nodal regions for both anal and rectal case planning; CTVB: external iliac nodal region for anal case planning and for selected rectal cases; CTVC: inguinal nodal region for anal case planning and for select rectal cases), and to outline these areas on individual computed tomographic images. The imaging files were shared via the Advanced Technology Consortium. A program developed by one of the co-authors (I.E.N.) used binomial maximum-likelihood estimates to generate a 95% group consensus contour. The computer-estimated consensus contours were then reviewed by the group and modified to provide a final contouring consensus atlas. Results: The panel achieved consensus CTV definitions to be used as guidelines for the adjuvant therapy of rectal cancer and definitive therapy for anal cancer. The most important difference from similar atlases for gynecologic or genitourinary cancer is mesorectal coverage. Detailed target volume contouring guidelines and images are discussed. Conclusion: This report serves as a template for the definition of the elective CTVs to be used in IMRT planning for anal and rectal cancers, as part of prospective RTOG trials.

  10. Systems definition study for shuttle demonstration flights of large space structures. Volume 1: Executive summary

    NASA Technical Reports Server (NTRS)

    1979-01-01

    The development of large space structure technology is discussed, with emphasis on space fabricated structures which are automatically manufactured in space from sheet-strip materials and assembled on-orbit. Definition of a flight demonstration involving an Automated Beam Builder and the building and assembling of large structures is presented.

  11. Very Large Data Volumes Analysis of Collaborative Systems with Finite Number of States

    ERIC Educational Resources Information Center

    Ivan, Ion; Ciurea, Cristian; Pavel, Sorin

    2010-01-01

    The collaborative system with finite number of states is defined. A very large database is structured. Operations on large databases are identified. Repetitive procedures for collaborative systems operations are derived. The efficiency of such procedures is analyzed. (Contains 6 tables, 5 footnotes and 3 figures.)

  12. Risk factors and patterns of lymph node involvement in primary gastric large B-cell lymphoma: implications for target definition

    PubMed Central

    Zhang, Ximei; Wang, Peiguo; Zhao, Lujun; Yuan, Zhiyong; Wang, Ping

    2016-01-01

    Background The aim of this study was to identify the appropriate radiation volume for primary gastric diffuse large B-cell lymphoma (PG-DLBCL). Methods We retrospectively analyzed the clinical and pathological findings of 68 patients treated with total gastrectomy and D2 lymphadenectomy. Results There were 23, 14, and 29 patients with stage I, stage II, and stage IIE disease, respectively, and 30 patients had lymph node involvement. Primary tumor location, as well as the depth of invasion, was significantly associated with lymph node involvement. When the tumor was limited to the muscularis, the involved lymph nodes were found to be perigastric nodes. For tumors invading beyond the muscularis, regional lymph nodes were involved. Conclusion The optimal radiation volume for patients with PG-DLBCL is largely dependent on the primary location and depth of invasion. Larger series and longer follow-up are needed to further delineate the radiation volumes for PG-DLBCL. PMID:27536138

  13. Target Volume Delineation in Oropharyngeal Cancer: Impact of PET, MRI, and Physical Examination

    SciTech Connect

    Thiagarajan, Anuradha; Caria, Nicola; Schoeder, Heiko; Iyer, N. Gopalakrishna; Wolden, Suzanne; Wong, Richard J.; Sherman, Eric; Fury, Matthew G.; Lee, Nancy

    2012-05-01

    Introduction: Sole utilization of computed tomography (CT) scans in gross tumor volume (GTV) delineation for head-and-neck cancers is subject to inaccuracies. This study aims to evaluate contributions of magnetic resonance imaging (MRI), positron emission tomography (PET), and physical examination (PE) to GTV delineation in oropharyngeal cancer (OPC). Methods: Forty-one patients with OPC were studied. All underwent contrast-enhanced CT simulation scans (CECTs) that were registered with pretreatment PETs and MRIs. For each patient, three sets of primary and nodal GTV were contoured. First, reference GTVs (GTVref) were contoured by the treating radiation oncologist (RO) using CT, MRI, PET, and PE findings. Additional GTVs were created using fused CT/PET scans (GTVctpet) and CT/MRI scans (GTVctmr) by two other ROs blinded to GTVref. To compare GTVs, concordance indices (CI) were calculated by dividing the respective overlap volumes by overall volumes. To evaluate the contribution of PE, composite GTVs derived from CT, MRI, and PET (GTVctpetmr) were compared with GTVref. Results: For primary tumors, GTVref was significantly larger than GTVctpet and GTVctmr (p < 0.001). Although no significant difference in size was noted between GTVctpet and GTVctmr (p = 0.39), there was poor concordance between them (CI = 0.62). In addition, although CI (ctpetmr vs. ref) was low, it was significantly higher than CI (ctpet vs. ref) and CI (ctmr vs. ref) (p < 0.001), suggesting that neither modality should be used alone. Qualitative analyses to explain the low CI (ctpetmr vs. ref) revealed underestimation of mucosal disease when GTV was contoured without knowledge of PE findings. Similar trends were observed for nodal GTVs. However, CI (ctpet vs. ref), CI (ctmr vs. ref), and CI (ctpetmr vs. ref) were high (>0.75), indicating that although the modalities were complementary, the added benefit was small in the context of CECTs. In addition, PE did not aid greatly in nodal GTV delineation

  14. PIM kinases are progression markers and emerging therapeutic targets in diffuse large B-cell lymphoma

    PubMed Central

    Brault, L; Menter, T; Obermann, E C; Knapp, S; Thommen, S; Schwaller, J; Tzankov, A

    2012-01-01

    Background: PIM serine/threonine kinases are often highly expressed in haematological malignancies. We have shown that PIM inhibitors reduced the survival and migration of leukaemic cells. Here, we investigated PIM kinases in diffuse large B-cell lymphoma (DLBCL) biopsy samples and DLBCL cell lines. Methods: Immunohistochemical staining for PIM kinases and CXCR4 was performed on tissue microarrays from a cohort of 101 DLBCL cases, and the effects of PIM inhibitors on the survival and migration of DLBCL cell lines were determined. Results: PIM1 expression significantly correlated with the activation of signal transducer and activator of transcription (STAT) 3 and 5, P-glycoprotein expression, CXCR4-S339 phosphorylation, and cell proliferation. Whereas most cases exhibited cytoplasmic or cytoplasmic and nuclear PIM1 and PIM2 expression, 12 cases (10 of the non-germinal centre DLBCL type) expressed PIM1 predominately in the nucleus. Interestingly, nuclear expression of PIM1 significantly correlated with disease stage. Exposure of DLBCL cell lines to PIM inhibitors modestly impaired cellular proliferation and CXCR4-mediated migration. Conclusion: This work demonstrates that PIM expression in DLBCL is associated with activation of the JAK/STAT signalling pathway and with the proliferative activity. The correlation of nuclear PIM1 expression with disease stage and the modest response to small-molecule inhibitors suggests that PIM kinases are progression markers rather than primary therapeutic targets in DLBCL. PMID:22722314

  15. Small, medium, large or supersize? The development and evaluation of interventions targeted at portion size.

    PubMed

    Vermeer, W M; Steenhuis, I H M; Poelman, M P

    2014-07-01

    In the past decades, portion sizes of high-caloric foods and drinks have increased and can be considered an important environmental obesogenic factor. This paper describes a research project in which the feasibility and effectiveness of environmental interventions targeted at portion size was evaluated. The studies that we conducted revealed that portion size labeling, offering a larger variety of portion sizes, and proportional pricing (that is, a comparable price per unit regardless of the size) were considered feasible to implement according to both consumers and point-of-purchase representatives. Studies into the effectiveness of these interventions demonstrated that the impact of portion size labeling on the (intended) consumption of soft drinks was, at most, modest. Furthermore, the introduction of smaller portion sizes of hot meals in worksite cafeterias in addition to the existing size stimulated a moderate number of consumers to replace their large meals by a small meal. Elaborating on these findings, we advocate further research into communication and marketing strategies related to portion size interventions; the development of environmental portion size interventions as well as educational interventions that improve people's ability to deal with a 'super-sized' environment; the implementation of regulation with respect to portion size labeling, and the use of nudges to stimulate consumers to select healthier portion sizes. PMID:25033959

  16. Genomic islands of divergence in hybridizing Heliconius butterflies identified by large-scale targeted sequencing

    PubMed Central

    Nadeau, Nicola J.; Whibley, Annabel; Jones, Robert T.; Davey, John W.; Dasmahapatra, Kanchon K.; Baxter, Simon W.; Quail, Michael A.; Joron, Mathieu; ffrench-Constant, Richard H.; Blaxter, Mark L.; Mallet, James; Jiggins, Chris D.

    2012-01-01

    Heliconius butterflies represent a recent radiation of species, in which wing pattern divergence has been implicated in speciation. Several loci that control wing pattern phenotypes have been mapped and two were identified through sequencing. These same gene regions play a role in adaptation across the whole Heliconius radiation. Previous studies of population genetic patterns at these regions have sequenced small amplicons. Here, we use targeted next-generation sequence capture to survey patterns of divergence across these entire regions in divergent geographical races and species of Heliconius. This technique was successful both within and between species for obtaining high coverage of almost all coding regions and sufficient coverage of non-coding regions to perform population genetic analyses. We find major peaks of elevated population differentiation between races across hybrid zones, which indicate regions under strong divergent selection. These ‘islands’ of divergence appear to be more extensive between closely related species, but there is less clear evidence for such islands between more distantly related species at two further points along the ‘speciation continuum’. We also sequence fosmid clones across these regions in different Heliconius melpomene races. We find no major structural rearrangements but many relatively large (greater than 1 kb) insertion/deletion events (including gain/loss of transposable elements) that are variable between races. PMID:22201164

  17. Small, medium, large or supersize? The development and evaluation of interventions targeted at portion size

    PubMed Central

    Vermeer, W M; Steenhuis, I H M; Poelman, M P

    2014-01-01

    In the past decades, portion sizes of high-caloric foods and drinks have increased and can be considered an important environmental obesogenic factor. This paper describes a research project in which the feasibility and effectiveness of environmental interventions targeted at portion size was evaluated. The studies that we conducted revealed that portion size labeling, offering a larger variety of portion sizes, and proportional pricing (that is, a comparable price per unit regardless of the size) were considered feasible to implement according to both consumers and point-of-purchase representatives. Studies into the effectiveness of these interventions demonstrated that the impact of portion size labeling on the (intended) consumption of soft drinks was, at most, modest. Furthermore, the introduction of smaller portion sizes of hot meals in worksite cafeterias in addition to the existing size stimulated a moderate number of consumers to replace their large meals by a small meal. Elaborating on these findings, we advocate further research into communication and marketing strategies related to portion size interventions; the development of environmental portion size interventions as well as educational interventions that improve people's ability to deal with a ‘super-sized' environment; the implementation of regulation with respect to portion size labeling, and the use of nudges to stimulate consumers to select healthier portion sizes. PMID:25033959

  18. Pharmacoproteomics identifies combinatorial therapy targets for diffuse large B cell lymphoma

    PubMed Central

    Goldstein, Rebecca L.; Yang, Shao Ning; Taldone, Tony; Chang, Betty; Gerecitano, John; Elenitoba-Johnson, Kojo; Shaknovich, Rita; Tam, Wayne; Leonard, John P.; Chiosis, Gabriela; Cerchietti, Leandro; Melnick, Ari

    2015-01-01

    Rationally designed combinations of targeted therapies for refractory cancers, such as activated B cell–like diffuse large B cell lymphoma (ABC DLBCL), are likely required to achieve potent, durable responses. Here, we used a pharmacoproteomics approach to map the interactome of a tumor-enriched isoform of HSP90 (teHSP90). Specifically, we chemically precipitated teHSP90-client complexes from DLBCL cell lines with the small molecule PU-H71 and found that components of the proximal B cell receptor (BCR) signalosome were enriched within teHSP90 complexes. Functional assays revealed that teHSP90 facilitates BCR signaling dynamics by enabling phosphorylation of key BCR signalosome components, including the kinases SYK and BTK. Consequently, treatment of BCR-dependent ABC DLBCL cells with PU-H71 attenuated BCR signaling, calcium flux, and NF-κB signaling, ultimately leading to growth arrest. Combined exposure of ABC DLBCL cell lines to PU-H71 and ibrutinib, a BCR pathway inhibitor, more potently suppressed BCR signaling than either drug alone. Correspondingly, PU-H71 combined with ibrutinib induced synergistic killing of lymphoma cell lines, primary human lymphoma specimens ex vivo, and lymphoma xenografts in vivo, without notable toxicity. Together, our results demonstrate that a pharmacoproteome-driven rational combination therapy has potential to provide more potent BCR-directed therapy for ABC DLCBL patients. PMID:26529251

  19. Determination of Atto- to Femtogram Levels of Americium and Curium Isotopes in Large-Volume Urine Samples by Compact Accelerator Mass Spectrometry.

    PubMed

    Dai, Xiongxin; Christl, Marcus; Kramer-Tremblay, Sheila; Synal, Hans-Arno

    2016-03-01

    Ultralow level analysis of actinides in urine samples may be required for dose assessment in the event of internal exposures to these radionuclides at nuclear facilities and nuclear power plants. A new bioassay method for analysis of sub-femtogram levels of Am and Cm in large-volume urine samples was developed. Americium and curium were co-precipitated with hydrous titanium oxide from the urine matrix and purified by column chromatography separation. After target preparation using mixed titanium/iron oxides, the final sample was measured by compact accelerator mass spectrometry. Urine samples spiked with known quantities of Am and Cm isotopes in the range of attogram to femtogram levels were measured for method evaluation. The results are in good agreement with the expected values, demonstrating the feasibility of compact accelerator mass spectrometry (AMS) for the determination of minor actinides at the levels of attogram/liter in urine samples to meet stringent sensitivity requirements for internal dosimetry assessment. PMID:26822907

  20. The Influence of Treatment Position (Prone vs. Supine) on Clip Displacement, Seroma, Tumor Bed and Partial Breast Target Volumes: Comparative Study.

    PubMed

    Lakosi, Ferenc; Gulyban, Akos; Simoni, Selma Ben-Mustapha; Nguyen, Paul Viet; Cucchiaro, Séverine; Seidel, Laurence; Janvary, Levente; Nicolas, Sophie; Vavassis, Peter; Coucke, Philippe

    2016-07-01

    To analyse the displacement of surgical clips in prone (Pr) position and assess the consequences on target volumes and integral dose of partial breast irradiation (PBI). 30 post-lumpectomy breast cancer patients underwent CT imaging in supine (Su) and Pr. Clip displacements were measured by the distances from the clips to a common fix bony reference point. On each dataset, the tumour bed (TB = clips ± seroma), clinical target volume (CTV = TB + 1.5 cm) and planning target volumes (PTV = CTV + 1 cm) for PBI were determined and the volume pairs were compared. Furthermore estimation of integral dose ratio (IDR) within the breast from tangential treatment was performed as the ratio of the irradiated breast volume and the volume encompassing all clips. Clips close to the chest wall (CW) in Su showed significantly less displacement in Pr. The mean volumes of seroma, CTV and PTV were significantly higher in Pr than in Su. The PTV volume difference (Pr-Su) was significantly higher in patients with presence of seroma, deep clips and TB location in the superior-internal-quadrant (SIQ) and at the junction of superior quadrants (jSQ). In a multivariate analysis two factors remained significant: seroma and TB localization in SIQ-jSQ. The IDR was significantly larger in Su than in Pr (7.6 vs. 4.1 p < 0.01). Clip displacements varied considerably with respect to their relative position to the CW. In selected patients Pr position potentially leads to a significant increase in target volumes of PBI. Tangential beam arrangement for PBI should be avoided, not only in Su but in Pr as well in case of clip-based target volume definition. PMID:26676979

  1. Hypervelocity Impact (HVI). Volume 3; WLE Small-Scale Fiberglass Panel Flat Target C-1

    NASA Technical Reports Server (NTRS)

    Gorman, Michael R.; Ziola, Steven M.

    2007-01-01

    During 2003 and 2004, the Johnson Space Center's White Sands Testing Facility in Las Cruces, New Mexico conducted hypervelocity impact tests on the space shuttle wing leading edge. Hypervelocity impact tests were conducted to determine if Micro-Meteoroid/Orbital Debris impacts could be reliably detected and located using simple passive ultrasonic methods. The objective of Target C-1 was to study hypervelocity impacts on the reinforced carbon-carbon (RCC) panels of the Wing Leading Edge. Fiberglass was used in place of RCC in the initial tests. Impact damage was detected using lightweight, low power instrumentation capable of being used in flight.

  2. Hypervelocity Impact (HVI). Volume 4; WLE Small-Scale Fiberglass Panel Flat Target C-2

    NASA Technical Reports Server (NTRS)

    Gorman, Michael R.; Ziola, Steven M.

    2007-01-01

    During 2003 and 2004, the Johnson Space Center's White Sands Testing Facility in Las Cruces, New Mexico conducted hypervelocity impact tests on the space shuttle wing leading edge. Hypervelocity impact tests were conducted to determine if Micro-Meteoroid/Orbital Debris impacts could be reliably detected and located using simple passive ultrasonic methods. The objective of Target C-2 was to study impacts through the reinforced carboncarbon (RCC) panels of the Wing Leading Edge. Fiberglass was used in place of RCC in the initial tests. Impact damage was detected using lightweight, low power instrumentation capable of being used in flight.

  3. Construction of Large-Volume Tissue Mimics with 3D Functional Vascular Networks.

    PubMed

    Kang, Tae-Yun; Hong, Jung Min; Jung, Jin Woo; Kang, Hyun-Wook; Cho, Dong-Woo

    2016-01-01

    We used indirect stereolithography (SL) to form inner-layered fluidic networks in a porous scaffold by introducing a hydrogel barrier on the luminal surface, then seeded the networks separately with human umbilical vein endothelial cells and human lung fibroblasts to form a tissue mimic containing vascular networks. The artificial vascular networks provided channels for oxygen transport, thus reducing the hypoxic volume and preventing cell death. The endothelium of the vascular networks significantly retarded the occlusion of channels during whole-blood circulation. The tissue mimics have the potential to be used as an in vitro platform to examine the physiologic and pathologic phenomena through vascular architecture. PMID:27228079

  4. Construction of Large-Volume Tissue Mimics with 3D Functional Vascular Networks

    PubMed Central

    Kang, Tae-Yun; Hong, Jung Min; Jung, Jin Woo; Kang, Hyun-Wook; Cho, Dong-Woo

    2016-01-01

    We used indirect stereolithography (SL) to form inner-layered fluidic networks in a porous scaffold by introducing a hydrogel barrier on the luminal surface, then seeded the networks separately with human umbilical vein endothelial cells and human lung fibroblasts to form a tissue mimic containing vascular networks. The artificial vascular networks provided channels for oxygen transport, thus reducing the hypoxic volume and preventing cell death. The endothelium of the vascular networks significantly retarded the occlusion of channels during whole-blood circulation. The tissue mimics have the potential to be used as an in vitro platform to examine the physiologic and pathologic phenomena through vascular architecture. PMID:27228079

  5. Estimating the eruptive volume of a large pyroclastic body: the Otowi Member of the Bandelier Tuff, Valles caldera, New Mexico

    NASA Astrophysics Data System (ADS)

    Cook, Geoffrey W.; Wolff, John A.; Self, Stephen

    2016-02-01

    The 1.60 Ma caldera-forming eruption of the Otowi Member of the Bandelier Tuff produced Plinian and coignimbrite fall deposits, outflow and intracaldera ignimbrite, all of it deposited on land. We present a detailed approach to estimating and reconstructing the original volume of the eroded, partly buried large ignimbrite and distal ash-fall deposits. Dense rock equivalent (DRE) volume estimates for the eruption are 89 + 33/-10 km3 of outflow ignimbrite and 144 ± 72 km3 of intracaldera ignimbrite. Also, there was at least 65 km3 (DRE) of Plinian fall when extrapolated distally, and 107 + 40/-12 km3 of coignimbrite ash was "lost" from the outflow sheet to form an unknown proportion of the distal ash fall. The minimum total volume is 216 km3 and the maximum is 550 km3; hence, the eruption overlaps the low end of the super-eruption spectrum (VEI ˜8.0). Despite an abundance of geological data for the Otowi Member, the errors attached to these estimates do not allow us to constrain the proportions of intracaldera (IC), outflow (O), and distal ash (A) to better than a factor of three. We advocate caution in applying the IC/O/A = 1:1:1 relation of Mason et al. (2004) to scaling up mapped volumes of imperfectly preserved caldera-forming ignimbrites.

  6. Large Deployable Reflector Science and Technology Workshop. Volume 3: Systems and Technology Assessment

    NASA Technical Reports Server (NTRS)

    Leidich, C. A. (Editor); Pittman, R. B. (Editor)

    1984-01-01

    The results of five technology panels which convened to discuss the Large Deployable Reflector (LDR) are presented. The proposed LDR is a large, ambient-temperature, far infrared/submillimeter telescope designed for space. Panel topics included optics, materials and structures, sensing and control, science instruments, and systems and missions. The telescope requirements, the estimated technology levels, and the areas in which the generic technology work has to be augmented are enumerated.

  7. Proceedings of the Large Deployable Reflector Science and Technology Workshop. Volume 1: Executive Summary

    NASA Technical Reports Server (NTRS)

    Leidich, C. A.; Pittman, B.

    1984-01-01

    A large ambient temperature, for infrared submillimeter telescope in space was discussed. The results of the scientific and technical activities were summarized. The scientific effort consisted of reviewing the science rationale for the Large Deployable Reflector (LDR) and arriving at a concensus set of scientific requirements. The telescope requirements were then compared to the current and anticipated state of the various technologies involved, and the technological shortfalls identified.

  8. Nuclear waste calorimeter for very large drums with 385 litres sample volume

    SciTech Connect

    Jossens, G.; Mathonat, C.; Bachelet, F.

    2015-03-15

    Calorimetry is a very precise and well adapted tool for the classification of drums containing nuclear waste material depending on their level of activities (low, medium, high). A new calorimeter has been developed by SETARAM Instrumentation and the CEA Valduc in France. This new calorimeter is designed for drums having a volume bigger than 100 liters. It guarantees high operator safety by optimizing drum handling and air circulation for cooling, and optimized software for direct measurement of the quantity of nuclear material. The LVC1380 calorimeter makes it possible to work over the range 10 to 3000 mW, which corresponds to approximately 0.03 to 10 g of tritium or 3 to 955 g of {sup 241}Pu in a volume up to 385 liters. This calorimeter is based on the heat flow measurement using Peltier elements which surround the drum in the 3 dimensions and therefore measure all the heat coming from the radioactive stuff whatever its position inside the drum. Calorimeter's insulating layers constitute a thermal barrier designed to filter disturbances until they represent less than 0.001 Celsius degrees and to eliminate long term disturbances associated, for example, with laboratory temperature variations between day and night. A calibration device based on Joule effect has also been designed. Measurement time has been optimized but remains long compared with other methods of measurement such as gamma spectrometry but its main asset is to have a good accuracy for low level activities.

  9. Variability of atmospheric circulation patterns associated with large volume changes of the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Lehmann, A.; Post, P.

    2015-10-01

    Salinity and stratification in the deep basins of the Baltic Sea are linked to the occurrence of Major Baltic Inflows (MBIs) of higher saline water of North Sea origin, which occur sporadically and transport higher saline and oxygenated water to deeper layers. Since the mid-1970s, the frequency and intensity of MBIs have decreased. They were completely absent between February 1983 and January 1993. However, in spite of the decreasing frequency of MBIs, there was no obvious decrease of larger Baltic Sea volume changes (LVCs). A LVC is defined by a total volume change of at least 100 km3. LVCs can be identified from the sea level changes at Landsort which is known to represent the mean sea level of the Baltic Sea very well. Strong inflows leading to LVCs are associated to a special sequence of atmospheric circulation patterns. Our analysis based on Jenkinson-Collison circulation (JCC) types confirms that most effective inflows occur if about a month before the main inflow period, eastern air flow with anticyclonic vorticity over the western Baltic prevails. These conditions reduce the mean sea level of the Baltic Sea and lead to an increased saline stratification in the Belt Sea area. An immediate period of strong to very strong westerly winds trigger the inflow and force LVCs/MBIs. The lack of MBIs coincide with a negative trend of eastern types and a parallel increase of western type JCCs.

  10. Large scale prop-fan structural design study. Volume 2: Preliminary design of SR-7

    NASA Technical Reports Server (NTRS)

    Billman, L. C.; Gruska, C. J.; Ladden, R. M.; Leishman, D. K.; Turnberg, J. E.

    1988-01-01

    In recent years, considerable attention has been directed toward improving aircraft fuel consumption. Studies have shown that the inherent efficiency advantage that turboprop propulsion systems have demonstrated at lower cruise speeds may now be extended to the higher speeds of today's turbofan and turbojet-powered aircraft. To achieve this goal, new propeller designs will require features such as thin, high speed airfoils and aerodynamic sweep, features currently found only in wing designs for high speed aircraft. This is Volume 2 of a 2 volume study to establish structural concepts for such advanced propeller blades, to define their structural properties, to identify any new design, analysis, or fabrication techniques which were required, and to determine the structural tradeoffs involved with several blade shapes selected primarily on the basis of aero/acoustic design considerations. The feasibility of fabricating and testing dynamically scaled models of these blades for aeroelastic testing was also established. The preliminary design of a blade suitable for flight use in a testbed advanced turboprop was conducted and is described.

  11. Accuracy of relocation, evaluation of geometric uncertainties and clinical target volume (CTV) to planning target volume (PTV) margin in fractionated stereotactic radiotherapy for intracranial tumors using relocatable Gill-Thomas-Cosman (GTC) frame.

    PubMed

    Das, Saikat; Isiah, Rajesh; Rajesh, B; Ravindran, B Paul; Singh, Rabi Raja; Backianathan, Selvamani; Subhashini, J

    2011-01-01

    The present study is aimed at determination of accuracy of relocation of Gill-Thomas-Cosman frame during fractionated stereotactic radiotherapy. The study aims to quantitatively determine the magnitudes of error in anteroposterior, mediolateral and craniocaudal directions, and determine the margin between clinical target volume to planning target volume based on systematic and random errors. Daily relocation error was measured using depth helmet and measuring probe. Based on the measurements, translational displacements in anteroposterior (z), mediolateral (x), and craniocaudal (y) directions were calculated. Based on the displacements in x, y and z directions, systematic and random error were calculated and three-dimensional radial displacement vector was determined. Systematic and random errors were used to derive CTV to PTV margin. The errors were within ± 2 mm in 99.2% cases in anteroposterior direction (AP), in 99.6% cases in mediolateral direction (ML), and in 97.6% cases in craniocaudal direction (CC). In AP, ML and CC directions, systematic errors were 0.56, 0.38, 0.42 mm and random errors were 1.86, 1.36 and 0.73 mm, respectively. Mean radial displacement was 1.03 mm ± 0.34. CTV to PTV margins calculated by ICRU formula were 1.86, 1.45 and 0.93 mm; by Stroom's formula they were 2.42, 1.74 and 1.35 mm; by van Herk's formula they were 2.7, 1.93 and 1.56 mm (AP, ML and CC directions). Depth helmet with measuring probe provides a clinically viable way for assessing the relocation accuracy of GTC frame. The errors were within ± 2 mm in all directions. Systematic and random errors were more along the anteroposterior axes. According to the ICRU formula, a margin of 2 mm around the tumor seems to be adequate. PMID:21587166

  12. The ADVANCE project: Formal evaluation of the targeted deployment. Volume 3

    SciTech Connect

    1997-01-01

    ADVANCE [Advanced Driver and Vehicle Advisory Navigation ConcEpt] was a public/private partnership conceived and developed by four founding parties. The founding parties include the Federal Highway Administration (FHWA), the Illinois Department of Transportation (IDOT), the University of Illinois at Chicago and Northwestern University operating together under the auspices of the Illinois Universities Transportation Research Consortium (IUTRC), and Motorola, Inc. The major responsibilities of each party are fully described in the Project agreement. Subsequently, these four were joined on the Steering Committee by the American Automobile Association (AAA). This unique blending of public sector, private sector and university interests, augmented by more than two dozen other private sector participants, provided a strong set of resources for ADVANCE. The ADVANCE test area covered over 300 square miles including portions of the City of Chicago and 40 northwest suburban communities. The Project encompasses the high growth areas adjacent to O`Hare International Airport, the Schaumbura/Hoffman Estates office and retail complexes, and the Lake-Cook Road development corridor. It also includes major sports and entertainment complexes such as the Arlington International Racecourse and the Rosemont Horizon. The population in the area is more than 750,000. This volume provides a summary of the insights and achievements made as a result of this field test, and selected appendices containing more detailed information.

  13. Comparison of planning target volumes based on three-dimensional and four-dimensional CT imaging of thoracic esophageal cancer

    PubMed Central

    Wang, Wei; Li, Jianbin; Zhang, Yingjie; Shao, Qian; Xu, Min; Fan, Tingyong; Wang, Jinzhi

    2016-01-01

    Background and purpose To investigate the definition of planning target volumes (PTVs) based on four-dimensional computed tomography (4DCT) compared with conventional PTV definition and PTV definition using asymmetrical margins for thoracic primary esophageal cancer. Materials and methods Forty-three patients with esophageal cancer underwent 3DCT and 4DCT simulation scans during free breathing. The motions of primary tumors located in the proximal (group A), middle (group B), and distal (group C) thoracic esophagus were obtained from the 4DCT scans. PTV3D was defined on 3DCT using the tumor motion measured based on 4DCT, PTV conventional (PTVconv) was defined on 3DCT by adding a 1.0 cm margin to the clinical target volume, and PTV4D was defined as the union of the target volumes contoured on the ten phases of the 4DCT images. The centroid positions, volumetric differences, and dice similarity coefficients were evaluated for all PTVs. Results The median centroid shifts between PTV3D and PTV4D and between PTVconv and PTV4D in all three dimensions were <0.3 cm for the three groups. The median size ratios of PTV4D to PTV3D were 0.80, 0.88, and 0.71, and PTV4D to PTVconv were 0.67, 0.73, and 0.76 (χ2=−3.18, −2.98, and −3.06; P=0.001, 0.003, and 0.002) for groups A, B, and C, respectively. The dice similarity coefficients were 0.87, 0.90, and 0.81 between PTV4D and PTV3D and 0.80, 0.84, and 0.83 between PTV4D and PTVconv (χ2 =−3.18, −2.98, and −3.06; P=0.001, 0.003, and 0.002) for groups A, B, and C, respectively. The difference between the degree of inclusion of PTV4D in PTV3D and that of PTV4D in PTVconv was <2% for all groups. Compared with PTVconv, the amount of irradiated normal tissue for PTV3D was decreased by 11.81% and 11.86% in groups A and B, respectively, but was increased by 2.93% in group C. Conclusion For proximal and middle esophageal cancer, 3DCT-based PTV using asymmetrical margins provides good coverage of PTV4D; however, for distal

  14. A large volume striped bass egg incubation chamber: design and comparison with a traditional method

    USGS Publications Warehouse

    Harper, C.J.

    2009-01-01

    I conducted a comparative study of a new jar design (experimental chamber) with a standard egg incubation vessel (McDonald jar). Experimental chambers measured 0.4 m in diameter by 1.3 m in height and had a volume of 200 L. McDonald hatching jars measured 16 cm in diameter by 45 cm in height and had a volume of 6 L. Post-hatch survival was estimated at 48, 96 and 144 h. Stocking rates resulted in an average egg density of 21.9 eggs ml-1 (range = 21.6 – 22.1) for McDonald jars and 10.9 eggs ml-1 (range = 7.0 – 16.8) for experimental chambers. I was unable to detect an effect of container type on survival to 48, 96 or 144 h. At 144 h striped bass fry survival averaged 37.3% for McDonald jars and 34.2% for experimental chambers. Survival among replicates was significantly different. Survival of striped bass significantly decreased between 96 and 144 h. Mean survival among replicates ranged from 12.4 to 57.3%. I was unable to detect an effect of initial stocking density on survival. Experimental jars allow for incubation of a larger number of eggs in a much smaller space. As hatchery production is often limited by space or water supply, experimental chambers offer an alternative to extending spawning activities, thereby reducing manpower and cost. However, the increase in the number of eggs per rearing container does increase the risk associated with catastrophic loss of a production unit. I conclude the experimental chamber is suitable for striped bass egg incubation.

  15. Quantifying the Impact of Immediate Reconstruction in Postmastectomy Radiation: A Large, Dose-Volume Histogram-Based Analysis

    SciTech Connect

    Ohri, Nisha; Cordeiro, Peter G.; Keam, Jennifer; Ballangrud, Ase; Shi Weiji; Zhang Zhigang; Nerbun, Claire T.; Woch, Katherine M.; Stein, Nicholas F.; Zhou Ying; McCormick, Beryl; Powell, Simon N.; Ho, Alice Y.

    2012-10-01

    Purpose: To assess the impact of immediate breast reconstruction on postmastectomy radiation (PMRT) using dose-volume histogram (DVH) data. Methods and Materials: Two hundred forty-seven women underwent PMRT at our center, 196 with implant reconstruction and 51 without reconstruction. Patients with reconstruction were treated with tangential photons, and patients without reconstruction were treated with en-face electron fields and customized bolus. Twenty percent of patients received internal mammary node (IMN) treatment. The DVH data were compared between groups. Ipsilateral lung parameters included V20 (% volume receiving 20 Gy), V40 (% volume receiving 40 Gy), mean dose, and maximum dose. Heart parameters included V25 (% volume receiving 25 Gy), mean dose, and maximum dose. IMN coverage was assessed when applicable. Chest wall coverage was assessed in patients with reconstruction. Propensity-matched analysis adjusted for potential confounders of laterality and IMN treatment. Results: Reconstruction was associated with lower lung V20, mean dose, and maximum dose compared with no reconstruction (all P<.0001). These associations persisted on propensity-matched analysis (all P<.0001). Heart doses were similar between groups (P=NS). Ninety percent of patients with reconstruction had excellent chest wall coverage (D95 >98%). IMN coverage was superior in patients with reconstruction (D95 >92.0 vs 75.7%, P<.001). IMN treatment significantly increased lung and heart parameters in patients with reconstruction (all P<.05) but minimally affected those without reconstruction (all P>.05). Among IMN-treated patients, only lower lung V20 in those without reconstruction persisted (P=.022), and mean and maximum heart doses were higher than in patients without reconstruction (P=.006, P=.015, respectively). Conclusions: Implant reconstruction does not compromise the technical quality of PMRT when the IMNs are untreated. Treatment technique, not reconstruction, is the primary

  16. Real-time target detection technology of large view-field infrared image based on multicore DSP parallel processing

    NASA Astrophysics Data System (ADS)

    Sun, Gang; Liu, Songlin; Wang, Weihua; Chen, Zengping

    2013-10-01

    In order to implement real-time detection of hedgehopping target in large view-field infrared (LVIR) image, the paper proposes a fast algorithm flow to extract the target region of interest (ROI). The ground building region was rejected quickly and target ROI was segmented roughly through the background classification. Then the background image containing target ROI was matched with previous frame based on a mean removal normalized product correlation (MRNPC) similarity measure function. Finally, the target motion area was extracted by inter-frame difference in time domain. According to the proposed algorithm flow, this paper designs the high-speed real-time signal processing hardware platform based on FPGA + DSP, and also presents a new parallel processing strategy that called function-level and task-level, which could parallel process LVIR image by multi-core and multi-task. Experimental results show that the algorithm can extract low altitude aero target with complex background in large view effectively, and the new design hardware platform could implement real time processing of the IR image with 50000x288 pixels per second in large view-field infrared search system (LVIRSS).

  17. Comparison and Consensus Guidelines for Delineation of Clinical Target Volume for CT- and MR-Based Brachytherapy in Locally Advanced Cervical Cancer

    SciTech Connect

    Viswanathan, Akila N.; Gaffney, David K.; Beriwal, Sushil; Bhatia, Sudershan K.; Lee Burnett, Omer; D'Souza, David P.; Patil, Nikhilesh; Haddock, Michael G.; Jhingran, Anuja; Jones, Ellen L.; Kunos, Charles A.; Lee, Larissa J.; Mayr, Nina A.; Petersen, Ivy; Petric, Primoz; Portelance, Lorraine; Small, William; Strauss, Jonathan B.; and others

    2014-10-01

    Objective: To create and compare consensus clinical target volume (CTV) contours for computed tomography (CT) and 3-Tesla (3-T) magnetic resonance (MR) image-based cervical-cancer brachytherapy. Methods and Materials: Twenty-three experts in gynecologic radiation oncology contoured the same 3 cervical cancer brachytherapy cases: 1 stage IIB near-complete response (CR) case with a tandem and ovoid, 1 stage IIB partial response (PR) case with tandem and ovoid with needles, and 1 stage IB2 CR case with a tandem and ring applicator. The CT contours were completed before the MRI contours. These were analyzed for consistency and clarity of target delineation using an expectation maximization algorithm for simultaneous truth and performance level estimation (STAPLE), with κ statistics as a measure of agreement between participants. The conformity index was calculated for each of the 6 data sets. Dice coefficients were generated to compare the CT and MR contours of the same case. Results: For all 3 cases, the mean tumor volume was smaller on MR than on CT (P<.001). The κ and conformity index estimates were slightly higher for CT, indicating a higher level of agreement on CT. The Dice coefficients were 89% for the stage IB2 case with a CR, 74% for the stage IIB case with a PR, and 57% for the stage IIB case with a CR. Conclusion: In a comparison of MR-contoured with CT-contoured CTV volumes, the higher level of agreement on CT may be due to the more distinct contrast medium visible on the images at the time of brachytherapy. MR at the time of brachytherapy may be of greatest benefit in patients with large tumors with parametrial extension that have a partial or complete response to external beam. On the basis of these results, a 95% consensus volume was generated for CT and for MR. Online contouring atlases are available for instruction at (http://www.nrgoncology.org/Resources/ContouringAtlases/GYNCervicalBrachytherapy.aspx)

  18. Combinatorial support vector machines approach for virtual screening of selective multi-target serotonin reuptake inhibitors from large compound libraries.

    PubMed

    Shi, Z; Ma, X H; Qin, C; Jia, J; Jiang, Y Y; Tan, C Y; Chen, Y Z

    2012-02-01

    Selective multi-target serotonin reuptake inhibitors enhance antidepressant efficacy. Their discovery can be facilitated by multiple methods, including in silico ones. In this study, we developed and tested an in silico method, combinatorial support vector machines (COMBI-SVMs), for virtual screening (VS) multi-target serotonin reuptake inhibitors of seven target pairs (serotonin transporter paired with noradrenaline transporter, H(3) receptor, 5-HT(1A) receptor, 5-HT(1B) receptor, 5-HT(2C) receptor, melanocortin 4 receptor and neurokinin 1 receptor respectively) from large compound libraries. COMBI-SVMs trained with 917-1951 individual target inhibitors correctly identified 22-83.3% (majority >31.1%) of the 6-216 dual inhibitors collected from literature as independent testing sets. COMBI-SVMs showed moderate to good target selectivity in misclassifying as dual inhibitors 2.2-29.8% (majority <15.4%) of the individual target inhibitors of the same target pair and 0.58-7.1% of the other 6 targets outside the target pair. COMBI-SVMs showed low dual inhibitor false hit rates (0.006-0.056%, 0.042-0.21%, 0.2-4%) in screening 17 million PubChem compounds, 168,000 MDDR compounds, and 7-8181 MDDR compounds similar to the dual inhibitors. Compared with similarity searching, k-NN and PNN methods, COMBI-SVM produced comparable dual inhibitor yields, similar target selectivity, and lower false hit rate in screening 168,000 MDDR compounds. The annotated classes of many COMBI-SVMs identified MDDR virtual hits correlate with the reported effects of their predicted targets. COMBI-SVM is potentially useful for searching selective multi-target agents without explicit knowledge of these agents. PMID:22064367

  19. Systems definition study for shuttle demonstration flights of large space structures. Volume 3: Thermal analyses

    NASA Technical Reports Server (NTRS)

    1979-01-01

    the development of large space structure technology is discussed. A detailed thermal analysis of a model space fabricated 1 meter beam is presented. Alternative thermal coatings are evaluated, and deflections, stresses, and stiffness variations resulting from flight orientations and solar conditions are predicted.

  20. RADON DIAGNOSTIC MEASUREMENT GUIDANCE FOR LARGE BUILDINGS - VOLUME 1. TECHNICAL REPORT

    EPA Science Inventory

    The report discusses the development of radon diagnostic procedures and mitigation strategies applicable to a variety of large non-residential buildings commonly found in Florida. The investigations document and evaluate the nature of radon occurrence and entry mechanisms for rad...

  1. Annular Momentum Control Device (AMCD). Volume 2: Application to a large space telescope

    NASA Technical Reports Server (NTRS)

    1975-01-01

    A conceptual design and set of dynamic equations of a gimbaled AMCD adapted to a Large Space Telescope are presented. Such a system could provide maneuver capability and precision pointing by means of one external gimbal, wheel speed control, and small motions of the rim within the magnetic gap.

  2. SU-E-J-75: Importance of 4DCT for Target Volume Definition in Stereotactic Lung Radiotherapy

    SciTech Connect

    Goksel, E; Cone, D; Kucucuk, H; Senkesen, O; Yilmaz, M; Aslay, I; Tezcanli, E; Garipagaoglu, M; Sengoz, M

    2014-06-01

    Purpose: We aimed to investigate the importance of 4DCT for lung tumors treated with SBRT and whether maximum intensity projection (MIP) and free breathing (FB) images can compansate for tumor movement. Methods: Six patients with primary lung cancer and 2 patients with lung metastasis with a median age of 69.5 (42–86) were included. Patients were positioned supine on a vacuum bag. In addition to FB planning CT images, 4DCT images were obtained at 3 mm intervals using Varian RPM system with (Siemens Somatom Sensetion 64). MIP series were reconstructed using 4DCT images. PTV-FB and PTV-MIP (GTV+5mm) volumes were contoured using FB and MIP series, respectively. GTVs were defined on each of eight different breathing phase images and were merged to create the ITV. PTV-4D was generated with a 5 mm margin to ITV. PTV-MIP and PTV-4D contours were copied to FB CT series and treatment plans for PTV-MIP and PTV-FB were generated using RapidArc (2 partial arc) technique in Eclipse (version 11, AAA algorithm). The prescription dose was 5600cGy in 7 fractions. ITV volumes receiving prescription dose (%) and V95 for ITV were calculated for each treatment plan. Results: The mean PTV-4B, PTV-MIP and PTV-FB volumes were 23.2 cc, 15.4cc ve 11cc respectively. Median volume of ITV receiving the prescription dose was 34.6% (16.4–70 %) and median V95 dose for ITV was 1699cGy (232cGy-5117cGy) in the plan optimized for PTV-FB as the reference. When the plan was optimized for PTV-MIP, median ITV volume receiving the prescription dose was 67.15% (26–86%) and median V95 dose for ITV was 4231cGy (1735cGy-5290cGy). Conclusion: Images used in lung SBRT are critical for treatment quality; FB and MIP images did not compensate target movement, therefore 4DCT images should be obtained for all patients undergoing lung SBRT or the safety margins should be adjusted.

  3. Zircon U-Pb geochronology of the Mount Givens Granodiorite: Implications for the genesis of large volumes of eruptible magma

    NASA Astrophysics Data System (ADS)

    Frazer, Ryan E.; Coleman, Drew S.; Mills, Ryan D.

    2014-04-01

    The Mount Givens Granodiorite, a large pluton in the central Sierra Nevada batholith, California, is similar in area to zoned intrusive suites yet is comparatively chemically and texturally homogenous. New zircon U-Pb geochronology indicates that the pluton was constructed over at least 7 Ma from 97.92 ± 0.06 Ma to 90.87 ± 0.05 Ma. Combining the new geochronology with the exposed volume of the pluton yields an estimated magma flux of <0.001 km3/a. The geochronologic data are at odds with the previously speculated links between plutons such as the Mount Givens Granodiorite and large-volume homogeneous ignimbrites (often termed monotonous intermediates). Existing data indicate that large plutons accumulate at rates of ≤0.001 km3/a, 1-2 orders of magnitude less than fluxes calculated for dated monotonous intermediates. If monotonous intermediates are remobilized, erupted plutons accumulated at rates comparable to dated examples, they should preserve a record of zircon growth of up to 10 Ma. Alternatively, the long history of zircon growth recorded in plutons may be erased during the processes of reheating and remobilization that precede supervolcano eruption. However, zircon dissolution modeling, based on hypothetical temperature-time histories for preeruptive monotonous intermediates, indicates that rejuvenation events would not sufficiently dissolve zircon. We suggest that eruptions of monotonous intermediates occur during high magmatic flux events, leaving little behind in the intrusive rock record, whereas low fluxes favor pluton accumulation.

  4. Radar detection of low-altitude targets in a maritime environment. Volume 1: Final analysis

    NASA Astrophysics Data System (ADS)

    Anderson, Kenneth D.

    1993-10-01

    Results from a unique analytical and measurement effort to assess low-altitude, short-range, radar detection capabilities in an evaporation ducting environment validate propagation model predictions of reduced radar detection ranges within the radio horizon. In addition, discrepancies between measured and predicted radar data demand a close examination of both meteorological data and surface layer theory. At ranges near and beyond the horizon, radar detection crucially depends both on the surface layer refractivity profile and on the adjacent mixed layer refractivity profile. A unified boundary layer model, an empirical model to merge the surface layer with the mixed layer, is described. Other discrepancies, which are thought to be caused either by inadequate surface layer modeling (perhaps the moisture stability function) or by inadequate boundary layer meteorological measurements, suggest the need for improvements in surface layer modeling and the need for new techniques to measure the refractivity structure. The combination of direct boundary layer (surface and mixed layer) meteorological measurements, remotely sensed radar measurements, and advanced numerical modeling capability provides valuable insight for a better understanding of the atmospheric boundary layer and its effects on the radar detection of low-altitude short-range targets.

  5. Are We Ready for Positron Emission Tomography/Computed Tomography-based Target Volume Definition in Lymphoma Radiation Therapy?

    SciTech Connect

    Yeoh, Kheng-Wei; Mikhaeel, N. George

    2013-01-01

    Fluorine-18 fluorodeoxyglucose (FDG)-positron emission tomography (PET)/computed tomography (CT) has become indispensable for the clinical management of lymphomas. With consistent evidence that it is more accurate than anatomic imaging in the staging and response assessment of many lymphoma subtypes, its utility continues to increase. There have therefore been efforts to incorporate PET/CT data into radiation therapy decision making and in the planning process. Further, there have also been studies investigating target volume definition for radiation therapy using PET/CT data. This article will critically review the literature and ongoing studies on the above topics, examining the value and methods of adding PET/CT data to the radiation therapy treatment algorithm. We will also discuss the various challenges and the areas where more evidence is required.

  6. Fast Quantitation of Target Analytes in Small Volumes of Complex Samples by Matrix-Compatible Solid-Phase Microextraction Devices.

    PubMed

    Piri-Moghadam, Hamed; Ahmadi, Fardin; Gómez-Ríos, German Augusto; Boyacı, Ezel; Reyes-Garcés, Nathaly; Aghakhani, Ali; Bojko, Barbara; Pawliszyn, Janusz

    2016-06-20

    Herein we report the development of solid-phase microextraction (SPME) devices designed to perform fast extraction/enrichment of target analytes present in small volumes of complex matrices (i.e. V≤10 μL). Micro-sampling was performed with the use of etched metal tips coated with a thin layer of biocompatible nano-structured polypyrrole (PPy), or by using coated blade spray (CBS) devices. These devices can be coupled either to liquid chromatography (LC), or directly to mass spectrometry (MS) via dedicated interfaces. The reported results demonstrated that the whole analytical procedure can be carried out within a few minutes with high sensitivity and quantitation precision, and can be used to sample from various biological matrices such as blood, urine, or Allium cepa L single-cells. PMID:27158909

  7. Bar coded retroreflective target

    DOEpatents

    Vann, Charles S.

    2000-01-01

    This small, inexpensive, non-contact laser sensor can detect the location of a retroreflective target in a relatively large volume and up to six degrees of position. The tracker's laser beam is formed into a plane of light which is swept across the space of interest. When the beam illuminates the retroreflector, some of the light returns to the tracker. The intensity, angle, and time of the return beam is measured to calculate the three dimensional location of the target. With three retroreflectors on the target, the locations of three points on the target are measured, enabling the calculation of all six degrees of target position. Until now, devices for three-dimensional tracking of objects in a large volume have been heavy, large, and very expensive. Because of the simplicity and unique characteristics of this tracker, it is capable of three-dimensional tracking of one to several objects in a large volume, yet it is compact, light-weight, and relatively inexpensive. Alternatively, a tracker produces a diverging laser beam which is directed towards a fixed position, and senses when a retroreflective target enters the fixed field of view. An optically bar coded target can be read by the tracker to provide information about the target. The target can be formed of a ball lens with a bar code on one end. As the target moves through the field, the ball lens causes the laser beam to scan across the bar code.

  8. Ultra-large scale AFM of lipid droplet arrays: investigating the ink transfer volume in dip pen nanolithography

    NASA Astrophysics Data System (ADS)

    Förste, Alexander; Pfirrmann, Marco; Sachs, Johannes; Gröger, Roland; Walheim, Stefan; Brinkmann, Falko; Hirtz, Michael; Fuchs, Harald; Schimmel, Thomas

    2015-05-01

    There are only few quantitative studies commenting on the writing process in dip-pen nanolithography with lipids. Lipids are important carrier ink molecules for the delivery of bio-functional patters in bio-nanotechnology. In order to better understand and control the writing process, more information on the transfer of lipid material from the tip to the substrate is needed. The dependence of the transferred ink volume on the dwell time of the tip on the substrate was investigated by topography measurements with an atomic force microscope (AFM) that is characterized by an ultra-large scan range of 800 × 800 μm2. For this purpose arrays of dots of the phospholipid1,2-dioleoyl-sn-glycero-3-phosphocholine were written onto planar glass substrates and the resulting pattern was imaged by large scan area AFM. Two writing regimes were identified, characterized of either a steady decline or a constant ink volume transfer per dot feature. For the steady state ink transfer, a linear relationship between the dwell time and the dot volume was determined, which is characterized by a flow rate of about 16 femtoliters per second. A dependence of the ink transport from the length of pauses before and in between writing the structures was observed and should be taken into account during pattern design when aiming at best writing homogeneity. The ultra-large scan range of the utilized AFM allowed for a simultaneous study of the entire preparation area of almost 1 mm2, yielding good statistic results.

  9. Soft SUSY breaking parameters and RG running of squark and slepton masses in large volume Swiss Cheese compactifications

    NASA Astrophysics Data System (ADS)

    Misra, Aalok; Shukla, Pramod

    2010-03-01

    We consider type IIB large volume compactifications involving orientifolds of the Swiss Cheese Calabi-Yau WCP[1,1,1,6,9] with a single mobile space-time filling D3-brane and stacks of D7-branes wrapping the “big” divisor ΣB (as opposed to the “small” divisor usually done in the literature thus far) as well as supporting D7-brane fluxes. After reviewing our proposal of [1] (Misra and Shukla, 2010) for resolving a long-standing tension between large volume cosmology and phenomenology pertaining to obtaining a 10 GeV gravitino in the inflationary era and a TeV gravitino in the present era, and summarizing our results of [1] (Misra and Shukla, 2010) on soft supersymmetry breaking terms and open-string moduli masses, we discuss the one-loop RG running of the squark and slepton masses in mSUGRA-like models (using the running of the gaugino masses) to the EW scale in the large volume limit. Phenomenological constraints and some of the calculated soft SUSY parameters identify the D7-brane Wilson line moduli as the first two generations/families of squarks and sleptons and the D3-brane (restricted to the big divisor) position moduli as the two Higgses for MSSM-like models at TeV scale. We also discuss how the obtained open-string/matter moduli make it easier to impose FCNC constraints, as well as RG flow of off-diagonal squark mass(-squared) matrix elements.

  10. Using large volume samplers for the monitoring of particle bound micro pollutants in rivers

    NASA Astrophysics Data System (ADS)

    Kittlaus, Steffen; Fuchs, Stephan

    2015-04-01

    The requirements of the WFD as well as substance emission modelling at the river basin scale require stable monitoring data for micro pollutants. The monitoring concepts applied by the local authorities as well as by many scientists use single sampling techniques. Samples from water bodies are usually taken in volumes of about one litre and depending on predetermined time steps or through discharge thresholds. For predominantly particle bound micro pollutants the small sample size of about one litre results in a very small amount of suspended particles. To measure micro pollutant concentrations in these samples is demanding and results in a high uncertainty of the measured concentrations, if the concentration is above the detection limit in the first place. In many monitoring programs most of the measured values were below the detection limit. This results in a high uncertainty if river loads were calculated from these data sets. The authors propose a different approach to gain stable concentration values for particle bound micro pollutants from river monitoring: A mixed sample of about 1000 L was pumped in a tank with a dirty-water pump. The sampling usually is done discharge dependant by using a gauge signal as input for the control unit. After the discharge event is over or the tank is fully filled, the suspended solids settle in the tank for 2 days. After this time a clear separation of water and solids can be shown. A sample (1 L) from the water phase and the total mass of the settled solids (about 10 L) are taken to the laboratory for analysis. While the micro pollutants can't hardly be detected in the water phase, the signal from the sediment is high above the detection limit, thus certain and very stable. From the pollutant concentration in the solid phase and the total tank volume the initial pollutant concentration in the sample can be calculated. If the concentration in the water phase is detectable, it can be used to correct the total load. This

  11. Reirradiation of Large-Volume Recurrent Glioma With Pulsed Reduced-Dose-Rate Radiotherapy

    SciTech Connect

    Adkison, Jarrod B.; Tome, Wolfgang; Seo, Songwon; Richards, Gregory M.; Robins, H. Ian; Rassmussen, Karl; Welsh, James S.; Mahler, Peter A.; Howard, Steven P.

    2011-03-01

    Purpose: Pulsed reduced-dose-rate radiotherapy (PRDR) is a reirradiation technique that reduces the effective dose rate and increases the treatment time, allowing sublethal damage repair during irradiation. Patients and Methods: A total of 103 patients with recurrent glioma underwent reirradiation using PRDR (86 considered to have Grade 4 at PRDR). PRDR was delivered using a series of 0.2-Gy pulses at 3-min intervals, creating an apparent dose rate of 0.0667 Gy/min to a median dose of 50 Gy (range, 20-60) delivered in 1.8-2.0-Gy fractions. The mean treatment volume was 403.5 {+-} 189.4 cm{sup 3} according to T{sub 2}-weighted magnetic resonance imaging and a 2-cm margin. Results: For the initial or upgraded Grade 4 cohort (n = 86), the median interval from the first irradiation to PRDR was 14 months. Patients undergoing PRDR within 14 months of the first irradiation (n = 43) had a median survival of 21 weeks. Those treated {>=}14 months after radiotherapy had a median survival of 28 weeks (n = 43; p = 0.004 and HR = 1.82 with a 95% CI ranging from 1.25 to 3.10). These data compared favorably to historical data sets, because only 16% of the patients were treated at first relapse (with 46% treated at the second relapse, 32% at the third or fourth relapse, and 4% at the fourth or fifth relapse). The median survival since diagnosis and retreatment was 6.3 years and 11.4 months for low-grade, 4.1 years and 5.6 months for Grade 3, and 1.6 years and 5.1 months for Grade 4 tumors, respectively, according to the initial histologic findings. Multivariate analysis revealed age at the initial diagnosis, initial low-grade disease, and Karnofsky performance score of {>=}80 to be significant predictors of survival after initiation of PRDR. Conclusion: PRDR allowed for safe retreatment of larger volumes to high doses with palliative benefit.

  12. Cranial location of level II lymph nodes in laryngeal cancer: Implications for elective nodal target volume delineation

    SciTech Connect

    Braam, Petra M. . E-mail: P.M.Braam@umcutrecht.nl; Raaijmakers, Cornelis P.J.; Terhaard, Chris

    2007-02-01

    Purpose: To analyze the cranial distribution of level II lymph nodes in patients with laryngeal cancer to optimize the elective radiation nodal target volume delineation. Methods and Materials: The most cranially located metastatic lymph node was delineated in 67 diagnostic CT data sets. The minimum distance from the base of the skull (BOS) to the lymph node was determined. Results: A total of 98 lymph nodes were delineated including 62 ipsilateral and 36 contralateral lymph nodes. The mean ipsilateral and contralateral distance from the top of the most cranial metastatic lymph node to the BOS was 36 mm (range, -9-120; standard deviation [SD], 17.9) and 35 mm (range, 14-78; SD 15.0), respectively. Only 5% and 12% of the ipsilateral and 3% and 9% of the contralateral metastatic lymph nodes were located within 15 mm and 20 mm below the BOS, respectively. No significant differences were found between patients with only ipsilateral metastatic lymph nodes and patients with bilateral metastatic lymph nodes. Between tumors that do cross the midline and those that do not, no significant difference was found in the distance of the most cranial lymph node to the BOS and the occurrence ipsilateral or contralateral. Conclusions: Setting the cranial border of the nodal target volume 1.5 cm below the base of the skull covers 95% of the lymph nodes and should be considered in elective nodal irradiation for laryngeal cancer. Bilateral neck irradiation is mandatory, including patients with unilateral laryngeal cancer, when elective irradiation is advised.

  13. Sci—Fri AM: Mountain — 06: Optimizing planning target volume in lung radiotherapy using deformable registration

    SciTech Connect

    Hoang, P; Wierzbicki, M

    2014-08-15

    A four dimensional computed tomography (4DCT) image is acquired for all radically treated, lung cancer patients to define the internal target volume (ITV), which encompasses tumour motion due to breathing and subclinical disease. Patient set-up error and anatomical motion that is not due to breathing is addressed through an additional 1 cm margin around the ITV to obtain the planning target volume (PTV). The objective of this retrospective study is to find the minimum PTV margin that provides an acceptable probability of delivering the prescribed dose to the ITV. Acquisition of a kV cone beam computed tomography (CBCT) image at each fraction was used to shift the treatment couch to accurately align the spinal cord and carina. Our method utilized deformable image registration to automatically position the planning ITV on each CBCT. We evaluated the percentage of the ITV surface that fell within various PTVs for 79 fractions across 18 patients. Treatment success was defined as a situation where at least 99% of the ITV is covered by the PTV. Overall, this is to be achieved in at least 90% of the treatment fractions. The current approach with a 1cm PTV margin was successful ∼96% of the time. This analysis revealed that the current margin can be reduced to 0.8cm isotropic or 0.6×0.6×1 cm{sup 3} non-isotropic, which were successful 92 and 91 percent of the time respectively. Moreover, we have shown that these margins maintain accuracy, despite intrafractional variation, and maximize CBCT image guidance capabilities.

  14. Under conditions of large geometric miss, tumor control probability can be higher for static gantry intensity-modulated radiation therapy compared to volume-modulated arc therapy for prostate cancer.

    PubMed

    Balderson, Michael; Brown, Derek; Johnson, Patricia; Kirkby, Charles

    2016-01-01

    The purpose of this work was to compare static gantry intensity-modulated radiation therapy (IMRT) with volume-modulated arc therapy (VMAT) in terms of tumor control probability (TCP) under scenarios involving large geometric misses, i.e., those beyond what are accounted for when margin expansion is determined. Using a planning approach typical for these treatments, a linear-quadratic-based model for TCP was used to compare mean TCP values for a population of patients who experiences a geometric miss (i.e., systematic and random shifts of the clinical target volume within the planning target dose distribution). A Monte Carlo approach was used to account for the different biological sensitivities of a population of patients. Interestingly, for errors consisting of coplanar systematic target volume offsets and three-dimensional random offsets, static gantry IMRT appears to offer an advantage over VMAT in that larger shift errors are tolerated for the same mean TCP. For example, under the conditions simulated, erroneous systematic shifts of 15mm directly between or directly into static gantry IMRT fields result in mean TCP values between 96% and 98%, whereas the same errors on VMAT plans result in mean TCP values between 45% and 74%. Random geometric shifts of the target volume were characterized using normal distributions in each Cartesian dimension. When the standard deviations were doubled from those values assumed in the derivation of the treatment margins, our model showed a 7% drop in mean TCP for the static gantry IMRT plans but a 20% drop in TCP for the VMAT plans. Although adding a margin for error to a clinical target volume is perhaps the best approach to account for expected geometric misses, this work suggests that static gantry IMRT may offer a treatment that is more tolerant to geometric miss errors than VMAT. PMID:27067229

  15. Large Deployable Reflector (LDR) system concept and technology definition study. Volume 1: Executive summary, analyses and trades, and system concepts

    NASA Astrophysics Data System (ADS)

    Agnew, Donald L.; Jones, Peter A.

    1989-04-01

    A study was conducted to define reasonable and representative large deployable reflector (LDR) system concepts for the purpose of defining a technology development program aimed at providing the requisite technological capability necessary to start LDR development by the end of 1991. This volume includes the executive summary for the total study, a report of thirteen system analysis and trades tasks (optical configuration, aperture size, reflector material, segmented mirror, optical subsystem, thermal, pointing and control, transportation to orbit, structures, contamination control, orbital parameters, orbital environment, and spacecraft functions), and descriptions of three selected LDR system concepts. Supporting information is contained in appendices.

  16. Implication for the Core-collapse Supernova Rate from 21 Years of Data of the Large Volume Detector

    NASA Astrophysics Data System (ADS)

    Agafonova, N. Y.; Aglietta, M.; Antonioli, P.; Ashikhmin, V. V.; Badino, G.; Bari, G.; Bertoni, R.; Bressan, E.; Bruno, G.; Dadykin, V. L.; Dobrynina, E. A.; Enikeev, R. I.; Fulgione, W.; Galeotti, P.; Garbini, M.; Ghia, P. L.; Giusti, P.; Gomez, F.; Kemp, E.; Malgin, A. S.; Molinario, A.; Persiani, R.; Pless, I. A.; Porta, A.; Ryasny, V. G.; Ryazhskaya, O. G.; Saavedra, O.; Sartorelli, G.; Shakiryanova, I. R.; Selvi, M.; Trinchero, G. C.; Vigorito, C.; Yakushev, V. F.; Zichichi, A.; LVD Collaboration

    2015-03-01

    The Large Volume Detector (LVD) has been continuously taking data since 1992 at the INFN Gran Sasso National Laboratory. The LVD is sensitive to neutrino bursts from gravitational stellar collapses with full detection probability over the Galaxy. We have searched for neutrino bursts in LVD data taken over 7,335 days of operation. No evidence of neutrino signals has been found between 1992 June and 2013 December. The 90% C.L. upper limit on the rate of core collapse and failed supernova explosions out to distances of 25 kpc is found to be 0.114 yr-1.

  17. Large Deployable Reflector (LDR) system concept and technology definition study. Volume 1: Executive summary, analyses and trades, and system concepts

    NASA Technical Reports Server (NTRS)

    Agnew, Donald L.; Jones, Peter A.

    1989-01-01

    A study was conducted to define reasonable and representative large deployable reflector (LDR) system concepts for the purpose of defining a technology development program aimed at providing the requisite technological capability necessary to start LDR development by the end of 1991. This volume includes the executive summary for the total study, a report of thirteen system analysis and trades tasks (optical configuration, aperture size, reflector material, segmented mirror, optical subsystem, thermal, pointing and control, transportation to orbit, structures, contamination control, orbital parameters, orbital environment, and spacecraft functions), and descriptions of three selected LDR system concepts. Supporting information is contained in appendices.

  18. Large Deployable Reflector Science and Technology Workshop. Volume 2: Scientific Rationale and Technology Requirements

    NASA Technical Reports Server (NTRS)

    Hollenbach, D. (Editor)

    1983-01-01

    The scientific rationale for the large deployable reflector (LDR) and the overall technological requirements are discussed. The main scientific objectives include studies of the origins of planets, stars and galaxies, and of the ultimate fate of the universe. The envisioned studies require a telescope with a diameter of at least 20 m, diffraction-limited to wavelengths as short as 30-50 micron. In addition, light-bucket operation with 1 arcsec spatial resolution in the 2-4 microns wavelength region would be useful in studies of high-redshifted galaxies. Such a telescope would provide a large increase in spectroscopic sensitivity and spatial resolving power compared with existing or planned infrared telescopes.

  19. Large-area chromogenics: Materials and devices for transmittance control. Volume IS 4

    SciTech Connect

    Lampert, C.M.; Granqvist, C.G.

    1990-12-31

    Chromogenic materials can alter their optical properties in a persistent yet reversible manner when subjected to a change in external conditions such as irradiation intensity, temperature, or electric-field strength. In the future chromogenic materials may be used on large scale to regulate the throughput of radiant energy for windows in buildings and cars, so that comfortable lighting and temperature are maintained without excessive air conditioning. The purpose of this book is to give a broad coverage of large-area chromogenics and to discuss their applications. The book is divided into the following areas: applications; photochromic materials; thermochromic materials; inorganic electrochromic materials; inorganic electrochromic materials; organic electrochromic materials; conductors for ions and electrons in electrochromic devices; electrochromic devices; and liquid crystals materials and devices. Separate abstracts were prepared for 33 papers in this book.

  20. Extraterrestrial processing and manufacturing of large space systems. Volume 3: Executive summary

    NASA Technical Reports Server (NTRS)

    Miller, R. H.; Smith, D. B. S.

    1979-01-01

    Facilities and equipment are defined for refining processes to commercial grade of lunar material that is delivered to a 'space manufacturing facility' in beneficiated, primary processed quality. The manufacturing facilities and the equipment for producing elements of large space systems from these materials and providing programmatic assessments of the concepts are also defined. In-space production processes of solar cells (by vapor deposition) and arrays, structures and joints, conduits, waveguides, RF equipment radiators, wire cables, converters, and others are described.

  1. Extraterrestrial processing and manufacturing of large space systems, volume 1, chapters 1-6

    NASA Technical Reports Server (NTRS)

    Miller, R. H.; Smith, D. B. S.

    1979-01-01

    Space program scenarios for production of large space structures from lunar materials are defined. The concept of the space manufacturing facility (SMF) is presented. The manufacturing processes and equipment for the SMF are defined and the conceptual layouts are described for the production of solar cells and arrays, structures and joints, conduits, waveguides, RF equipment radiators, wire cables, and converters. A 'reference' SMF was designed and its operation requirements are described.

  2. Study of auxiliary propulsion requirements for large space systems, volume 2

    NASA Technical Reports Server (NTRS)

    Smith, W. W.; Machles, G. W.

    1983-01-01

    A range of single shuttle launched large space systems were identified and characterized including a NASTRAN and loading dynamics analysis. The disturbance environment, characterization of thrust level and APS mass requirements, and a study of APS/LSS interactions were analyzed. State-of-the-art capabilities for chemical and ion propulsion were compared with the generated propulsion requirements to assess the state-of-the-art limitations and benefits of enhancing current technology.

  3. Operation of a DC large aperture volume-production H sup minus source

    SciTech Connect

    Kwan, J.W.; Ackerman, G.D.; Anderson, O.A.; Chan, C.F.; Cooper, W.S.; deVries, G.J.; Leung, K.N.; Lietzke, A.F.; Steele, W.F.

    1989-04-01

    In testing a multicusp volume-production H{sup {minus}} ion source (20 cm diameter, 23 cm long), we optimized the gas pressure, the plasma electrode bias potential and the magnetic filter. At the optimum pressure of 9 mT, the H{sup {minus}} beam output increased linearly with discharge power. The maximum H{sup {minus}} beam, measured with a current transformer downstream of the accelerator, was 100 mA while using a 6.67 cm{sup 2} aperture. Presently we are limited by overheating of the cathodes by the plasma ions. Under similar discharge conditions the maximum H{sup {minus}} current density was found to vary as a{sup {minus}0.7} where a is the aperture radius. Results from emittance measurements showed that the effective H{sup {minus}} ion temperature increased with a for a {gt} 0.8 cm. Thus the brightness of the beam decreased with increasing aperture radius. Operating the source with cesium would increase the H{sup {minus}} output however our accelerator must be improved to avoid breakdowns caused by the cesium contamination. 8 refs., 6 figs.

  4. Neutron spectrometry with large volume, heavy-loaded superheated droplet detectors: a simple spin-off.

    PubMed

    Ramos, A R; Giuliani, F; Felizardo, M; Girard, T A; Morlat, T; Marques, J G; Oliveira, C; Limagne, D; Waysand, G; Fernandes, A C

    2005-01-01

    SIMPLE is a superheated droplet detector (SDD) experiment designed to search for the evidence of spin-dependent weakly interacting neutralino dark matter (WIMPs). SDDs, a type of emulsion detector, consist of a uniform suspension of superheated liquid droplets in a compliant material such as a polymeric or aqueous gel. We report on the first neutron spectrometry experiments with SIMPLE SDDs, a spin-off of the neutron detector calibrations performed at the Portuguese Research Reactor. SIMPLE SDDs differ from most SDDs available commercially as they have a 10 times higher loading factor, containing 10(3) times more freon than their commercial counterparts and a 100 times larger volume. We have analysed the response of SIMPLE SDDs to two quasi-monochromatic neutron beams of energies 54 and 144 keV obtained with passive filters. Results show that the characteristic peaks in the fluence distribution of both filters could be determined and their energy position obtained using a simple thermodynamic relation. PMID:16381754

  5. Inclusion of fluid-solid interaction in Volume of Fluid to simulate spreading and dewetting for large contact angles

    NASA Astrophysics Data System (ADS)

    Mahady, Kyle; Afkhami, Shahriar; Kondic, Lou

    2014-11-01

    The van der Waals (vdW) interaction between molecules is of fundamental importance in determining the behavior of three phase systems in fluid mechanics. This interaction gives rise to interfacial energies, and thus the contact angle for a droplet on a solid surface, and additionally leads to instability of very thin liquid films. We develop a hybrid method for including a Lennard-Jones type vdW interaction in a finite volume, Volume of Fluid (VoF) based solver for the full two-phase Navier-Stokes equations. This method includes the full interaction between each fluid phase and the solid substrate via a finite-volume approximation of the vdW body force. Our work is distinguished from conventional VoF based implementations in that the contact angle arises from simulation of the underlying physics, as well as successfully treating vdW induced film rupture. At the same time, it avoids the simplifications of calculations based on disjoining-pressure, where the vdW interaction is included as a pressure jump across the interface which is derived under the assumption of a flat film. This is especially relevant in the simulation of nanoscale film ruptures involving large contact angles, which have been studied recently in the context of bottom-up nanoparticle fabrication. This work is partially supported by the Grants NSF DMS-1320037 and CBET-1235710.

  6. Defining the Optimal Planning Target Volume in Image-Guided Stereotactic Radiosurgery of Brain Metastases: Results of a Randomized Trial

    SciTech Connect

    Kirkpatrick, John P.; Wang, Zhiheng; Sampson, John H.; McSherry, Frances; Herndon, James E.; Allen, Karen J.; Duffy, Eileen; Hoang, Jenny K.; Chang, Zheng; Yoo, David S.; Kelsey, Chris R.; Yin, Fang-Fang

    2015-01-01

    Purpose: To identify an optimal margin about the gross target volume (GTV) for stereotactic radiosurgery (SRS) of brain metastases, minimizing toxicity and local recurrence. Methods and Materials: Adult patients with 1 to 3 brain metastases less than 4 cm in greatest dimension, no previous brain radiation therapy, and Karnofsky performance status (KPS) above 70 were eligible for this institutional review board–approved trial. Individual lesions were randomized to 1- or 3- mm uniform expansion of the GTV defined on contrast-enhanced magnetic resonance imaging (MRI). The resulting planning target volume (PTV) was treated to 24, 18, or 15 Gy marginal dose for maximum PTV diameters less than 2, 2 to 2.9, and 3 to 3.9 cm, respectively, using a linear accelerator–based image-guided system. The primary endpoint was local recurrence (LR). Secondary endpoints included neurocognition Mini-Mental State Examination, Trail Making Test Parts A and B, quality of life (Functional Assessment of Cancer Therapy-Brain), radionecrosis (RN), need for salvage radiation therapy, distant failure (DF) in the brain, and overall survival (OS). Results: Between February 2010 and November 2012, 49 patients with 80 brain metastases were treated. The median age was 61 years, the median KPS was 90, and the predominant histologies were non–small cell lung cancer (25 patients) and melanoma (8). Fifty-five, 19, and 6 lesions were treated to 24, 18, and 15 Gy, respectively. The PTV/GTV ratio, volume receiving 12 Gy or more, and minimum dose to PTV were significantly higher in the 3-mm group (all P<.01), and GTV was similar (P=.76). At a median follow-up time of 32.2 months, 11 patients were alive, with median OS 10.6 months. LR was observed in only 3 lesions (2 in the 1 mm group, P=.51), with 6.7% LR 12 months after SRS. Biopsy-proven RN alone was observed in 6 lesions (5 in the 3-mm group, P=.10). The 12-month DF rate was 45.7%. Three months after SRS, no significant change in

  7. Large-volume volcanic edifi ce failures in Central America and associated hazards

    USGS Publications Warehouse

    Siebert, L.; Alvarado, Guillermo E.; Vallance, J.W.; Van Wyk, De Vries, B.

    2006-01-01

    Edifi ce-collapse phenomena have, to date, received relatively little attention in Central America, although ??40 major collapse events (??0.1 km3) from about two dozen volcanoes are known or inferred in this volcanic arc. Volcanoes subjected to gravitational failure are concentrated at the arc's western and eastern ends. Failures correlate positively with volcano elevation, substrate elevation, edifi ce height, volcano volume, and crustal thickness and inversely with slab descent angle. Collapse orientations are strongly infl uenced by the direction of slope of the underlying basement, and hence are predominately perpendicular to the arc (preferentially to the south) at its extremities and display more variable failure directions in the center of the arc. The frequency of collapse events in Central America is poorly constrained because of the lack of precise dating of deposits, but a collapse interval of ??1000-2000 yr has been estimated during the Holocene. These high-impact events fortunately occur at low frequency, but the proximity of many Central American volcanoes to highly populated regions, including some of the region's largest cities, requires evaluation of their hazards. The primary risks are from extremely mobile debris avalanches and associated lahars, which in Central America have impacted now-populated areas up to ??50 km from a source volcano. Lower probability risks associated with volcanic edifi ce collapse derive from laterally directed explosions and tsunamis. The principal hazards of the latter here result from potential impact of debris avalanches into natural or man-made lakes. Much work remains on identifying and describing debris-avalanche deposits in Central America. The identifi cation of potential collapse sites and assessing and monitoring the stability of intact volcanoes is a major challenge for the next decade. ?? 2006 Geological Society of America.

  8. Hierarchical storage of large volume of multidector CT data using distributed servers

    NASA Astrophysics Data System (ADS)

    Ratib, Osman; Rosset, Antoine; Heuberger, Joris; Bandon, David

    2006-03-01

    Multidector scanners and hybrid multimodality scanners have the ability to generate large number of high-resolution images resulting in very large data sets. In most cases, these datasets are generated for the sole purpose of generating secondary processed images and 3D rendered images as well as oblique and curved multiplanar reformatted images. It is therefore not essential to archive the original images after they have been processed. We have developed an architecture of distributed archive servers for temporary storage of large image datasets for 3D rendering and image processing without the need for long term storage in PACS archive. With the relatively low cost of storage devices it is possible to configure these servers to hold several months or even years of data, long enough for allowing subsequent re-processing if required by specific clinical situations. We tested the latest generation of RAID servers provided by Apple computers with a capacity of 5 TBytes. We implemented a peer-to-peer data access software based on our Open-Source image management software called OsiriX, allowing remote workstations to directly access DICOM image files located on the server through a new technology called "bonjour". This architecture offers a seamless integration of multiple servers and workstations without the need for central database or complex workflow management tools. It allows efficient access to image data from multiple workstation for image analysis and visualization without the need for image data transfer. It provides a convenient alternative to centralized PACS architecture while avoiding complex and time-consuming data transfer and storage.

  9. Systems definition study for shuttle demonstration flights of large space structures, Volume 2: Technical Report

    NASA Technical Reports Server (NTRS)

    1979-01-01

    The development of large space structure (LSS) technology is discussed, with emphasis on space fabricated structures which are automatically manufactured in space from sheet-strip materials and assembled on-orbit. It is concluded that an LSS flight demonstration using an Automated Beam Builder and the orbiter as a construction base, could be performed in the 1983-1984 time period. The estimated cost is $24 million exclusive of shuttle launch costs. During the mission, a simple space platform could be constructed in-orbit to accommodate user requirements associated with earth viewing and materials exposure experiments needs.

  10. No evidence of a threshold in traffic volume affecting road-kill mortality at a large spatio-temporal scale

    SciTech Connect

    Grilo, Clara; Ferreira, Flavio Zanchetta; Revilla, Eloy

    2015-11-15

    Previous studies have found that the relationship between wildlife road mortality and traffic volume follows a threshold effect on low traffic volume roads. We aimed at evaluating the response of several species to increasing traffic intensity on highways over a large geographic area and temporal period. We used data of four terrestrial vertebrate species with different biological and ecological features known by their high road-kill rates: the barn owl (Tyto alba), hedgehog (Erinaceus europaeus), red fox (Vulpes vulpes) and European rabbit (Oryctolagus cuniculus). Additionally, we checked whether road-kill likelihood varies when traffic patterns depart from the average. We used annual average daily traffic (AADT) and road-kill records observed along 1000 km of highways in Portugal over seven consecutive years (2003–2009). We fitted candidate models using Generalized Linear Models with a binomial distribution through a sample unit of 1 km segments to describe the effect of traffic on the probability of finding at least one victim in each segment during the study. We also assigned for each road-kill record the traffic of that day and the AADT on that year to test for differences using Paired Student's t-test. Mortality risk declined significantly with traffic volume but varied among species: the probability of finding road-killed red foxes and rabbits occurs up to moderate traffic volumes (< 20,000 AADT) whereas barn owls and hedgehogs occurred up to higher traffic volumes (40,000 AADT). Perception of risk may explain differences in responses towards high traffic highway segments. Road-kill rates did not vary significantly when traffic intensity departed from the average. In summary, we did not find evidence of traffic thresholds for the analysed species and traffic intensities. We suggest mitigation measures to reduce mortality be applied in particular on low traffic roads (< 5000 AADT) while additional measures to reduce barrier effects should take into account

  11. Large-volume data delivery from low-Earth orbit to ground using efficient single-mode optical receivers

    NASA Astrophysics Data System (ADS)

    Robinson, B. S.; Schieler, C. M.; Boroson, D. M.

    2016-03-01

    Space systems operating in low-Earth orbit are often constrained by how much data can be delivered from space to ground. Traditional data delivery approaches are often limited by either large link losses associated with transmission via a geosynchronous relay satellite or short contact times and spectrum-constrained data rates associated with direct-to-Earth radio-frequency links. Direct-to-Earth optical communication links from low-Earth orbit based on fiber telecommunications technologies that can operate at high data rates (> 100 Gb/s per wavelength channel) can enable the delivery of extremely large volumes of data from space to ground. We analyze the performance of such systems and discuss the performance gains that are enabled by coupling the received signal to an efficient single-mode-fiber-based receiver, even in the presence of turbulence-induced losses.

  12. Characteristics of surface-wave and volume-wave plasmas produced with internally mounted large-area planar microwave launcher

    SciTech Connect

    Nagatsu, Masaaki; Naito, Katsutoshi; Ogino, Akihisa; Ninomiya, Keigo; Nanko, Shohei

    2005-10-17

    We studied discharge characteristics of microwave plasmas excited with a large-area planar microwave launcher installed internally in a 600-mm-diam cylindrical vacuum chamber. With the microwave power less than roughly 400 W, we demonstrated the large volumetric volume-wave plasma (VWP) spread in the entire chamber at a pressure of 14-27 Pa in He. Above 400 W, the plasma discharge made a sudden transition to higher-density, uniform surface-wave plasma (SWP) having a spatial uniformity of {+-}3.5% over 300 mm in diameter. Electron energy probability functions in the downstream region were studied using Langmuir probe measurements with Druyvesteyn method in both the SWP and VWP discharges.

  13. Requirements for a mobile communications satellite system. Volume 3: Large space structures measurements study

    NASA Technical Reports Server (NTRS)

    Akle, W.

    1983-01-01

    This study report defines a set of tests and measurements required to characterize the performance of a Large Space System (LSS), and to scale this data to other LSS satellites. Requirements from the Mobile Communication Satellite (MSAT) configurations derived in the parent study were used. MSAT utilizes a large, mesh deployable antenna, and encompasses a significant range of LSS technology issues in the areas of structural/dynamics, control, and performance predictability. In this study, performance requirements were developed for the antenna. Special emphasis was placed on antenna surface accuracy, and pointing stability. Instrumentation and measurement systems, applicable to LSS, were selected from existing or on-going technology developments. Laser ranging and angulation systems, presently in breadboard status, form the backbone of the measurements. Following this, a set of ground, STS, and GEO-operational were investigated. A third scale (15 meter) antenna system as selected for ground characterization followed by STS flight technology development. This selection ensures analytical scaling from ground-to-orbit, and size scaling. Other benefits are cost and ability to perform reasonable ground tests. Detail costing of the various tests and measurement systems were derived and are included in the report.

  14. X-ray imaging of uniform large scale-length plasmas created from gas-filled targets on Nova

    SciTech Connect

    Kalantar, D.H.; MacGowan, B.J.; Bernat, T.P.; Klem, D.E.; Montgomery, D.S.; Moody, J.D.; Munro, D.H.; Stone, G.F. ); Hsing, W.W. ); Failor, B.H. )

    1995-01-01

    We report on the production and characterization of large scale-length plasmas created by illuminating gas-filled thin-walled balloonlike targets using the Nova laser. The targets consisted of a 5--6000 A skin surrounding 1 atm of neopentane which when ionized becomes a plasma with 10[sup 21] electrons/cm[sup 3]. Results are presented from x-ray imaging used to evaluate the uniformity of the plasma. The most uniform plasmas were produced by illuminating the target with large converging beams that overlapped to cover most of the surface of the gas bag. An alternate focus geometry using small beam spots resulted in a less uniform plasma with low density holes in it.

  15. Large Dog Relinquishment to Two Municipal Facilities in New York City and Washington, D.C.: Identifying Targets for Intervention

    PubMed Central

    Weiss, Emily; Slater, Margaret; Garrison, Laurie; Drain, Natasha; Dolan, Emily; Scarlett, Janet M.; Zawistowski, Stephen L.

    2014-01-01

    Simple Summary While the overall trend in euthanasia has been decreasing nationally, large dogs are at a higher risk of euthanasia than other-sized dogs in most animal shelters in the United States. We hypothesized that one way to increase the lives saved with regard to large dogs in shelters is to keep them home in the first place when possible. Our research is the first to collect data in New York City and Washington, D.C., identifying the process leading to the owner relinquishment of large dogs. We found that targets for interventions to decrease large dog relinquishment are likely different in each community. Abstract While the overall trend in euthanasia has been decreasing nationally, large dogs are at a higher risk of euthanasia than other sized dogs in most animal shelters in the United States. We hypothesized one way to increase the lives saved with respect to these large dogs is to keep them home when possible. In order to develop solutions to decrease relinquishment, a survey was developed to learn more about the reasons owners relinquish large dogs. The survey was administered to owners relinquishing their dogs at two large municipal facilities, one in New York City and one in Washington, D.C. There were 157 responses between the two facilities. We found both significant similarities and differences between respondents and their dogs from the two cities. We identified opportunities to potentially support future relinquishers and found that targets for interventions are likely different in each community. PMID:26480315

  16. Pre-column dilution large volume injection ultra-high performance liquid chromatography-tandem mass spectrometry for the analysis of multi-class pesticides in cabbages.

    PubMed

    Zhong, Qisheng; Shen, Lingling; Liu, Jiaqi; Yu, Dianbao; Li, Siming; Yao, Jinting; Zhan, Song; Huang, Taohong; Hashi, Yuki; Kawano, Shin-ichi; Liu, Zhaofeng; Zhou, Ting

    2016-04-15

    Pre-column dilution large volume injection (PD-LVI), a novel sample injection technique for reverse phase ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS), was developed in this study. The PD-LVI UHPLC-MS/MS system was designed by slightly modifying the commercial UHPLC-MS/MS equipment with a mixer chamber. During the procedure of PD-LVI, sample solution of 200μL was directly carried by the organic mobile phase to the mixer and diluted with the aqueous mobile phase. After the mixture was introduced to the UHPLC column in a mobile phase of acetonitrile-water (15/85, v/v), the target analytes were stacked on the head of the column until following separation. Using QuEChERS extraction, no additional steps such as solvent evaporation or residue redissolution were needed before injection. The features of PD-LVI UHPLC-MS/MS system were systematically investigated, including the injection volume, the mixer volume, the precondition time and the gradient elution. The efficiency of this approach was demonstrated by direct analysis of 24 pesticides in cabbages. Under the optimized conditions, low limits of detection (0.00074-0.8 ng/kg) were obtained. The recoveries were in the range of 63.3-109% with relative standard deviations less than 8.1%. Compared with common UHPLC-MS/MS technique, PD-LVI UHPLC-MS/MS showed significant advantages such as excellent sensitivity and reliability. The mechanism of PD-LVI was demonstrated to be based on the column-head stacking effect with pre-column dilution. Based on the results, PD-LVI as a simple and effective sample injection technique of reverse phase UHPLC-MS/MS for the analysis of trace analytes in complex samples showed a great promising prospect. PMID:26979268

  17. Pros: concurrent chemo-radiotherapy remains the ideal treatment in fit patients with large volume unresectable stage III non-small cell lung cancer

    PubMed Central

    Rabatic, Bryan M.

    2016-01-01

    The debate of treating stage III, large volume non-small cell lung cancer (NSCLC) with definitive chemo-radiotherapy continues to be waged. A physically fit patient, having large volume and unresectable disease is the ideal candidate for this treatment approach. The ability of this patient population to successfully complete, and thereby benefit from an aggressive, combined treatment to improve local control and survival, drives the recommendation of treating oncologists for this approach. Until a phase III trial proves otherwise, concurrent chemo-radiotherapy will remain the ideal treatment for fit patients having large volume unresectable stage III NSCLC. PMID:27186513

  18. Aging and large-scale functional networks: white matter integrity, gray matter volume, and functional connectivity in the resting state.

    PubMed

    Marstaller, L; Williams, M; Rich, A; Savage, G; Burianová, H

    2015-04-01

    Healthy aging is accompanied by neurobiological changes that affect the brain's functional organization and the individual's cognitive abilities. The aim of this study was to investigate the effect of global age-related differences in the cortical white and gray matter on neural activity in three key large-scale networks. We used functional-structural covariance network analysis to assess resting state activity in the default mode network (DMN), the fronto-parietal network (FPN), and the salience network (SN) of young and older adults. We further related this functional activity to measures of cortical thickness and volume derived from structural MRI, as well as to measures of white matter integrity (fractional anisotropy [FA], mean diffusivity [MD], and radial diffusivity [RD]) derived from diffusion-weighted imaging. First, our results show that, in the direct comparison of resting state activity, young but not older adults reliably engage the SN and FPN in addition to the DMN, suggesting that older adults recruit these networks less consistently. Second, our results demonstrate that age-related decline in white matter integrity and gray matter volume is associated with activity in prefrontal nodes of the SN and FPN, possibly reflecting compensatory mechanisms. We suggest that age-related differences in gray and white matter properties differentially affect the ability of the brain to engage and coordinate large-scale functional networks that are central to efficient cognitive functioning. PMID:25644420

  19. Large-scale automatic extraction of side effects associated with targeted anticancer drugs from full-text oncological articles.

    PubMed

    Xu, Rong; Wang, QuanQiu

    2015-06-01

    Targeted anticancer drugs such as imatinib, trastuzumab and erlotinib dramatically improved treatment outcomes in cancer patients, however, these innovative agents are often associated with unexpected side effects. The pathophysiological mechanisms underlying these side effects are not well understood. The availability of a comprehensive knowledge base of side effects associated with targeted anticancer drugs has the potential to illuminate complex pathways underlying toxicities induced by these innovative drugs. While side effect association knowledge for targeted drugs exists in multiple heterogeneous data sources, published full-text oncological articles represent an important source of pivotal, investigational, and even failed trials in a variety of patient populations. In this study, we present an automatic process to extract targeted anticancer drug-associated side effects (drug-SE pairs) from a large number of high profile full-text oncological articles. We downloaded 13,855 full-text articles from the Journal of Oncology (JCO) published between 1983 and 2013. We developed text classification, relationship extraction, signaling filtering, and signal prioritization algorithms to extract drug-SE pairs from downloaded articles. We extracted a total of 26,264 drug-SE pairs with an average precision of 0.405, a recall of 0.899, and an F1 score of 0.465. We show that side effect knowledge from JCO articles is largely complementary to that from the US Food and Drug Administration (FDA) drug labels. Through integrative correlation analysis, we show that targeted drug-associated side effects positively correlate with their gene targets and disease indications. In conclusion, this unique database that we built from a large number of high-profile oncological articles could facilitate the development of computational models to understand toxic effects associated with targeted anticancer drugs. PMID:25817969

  20. A device for the nondestructive decontamination of large volumes of infected egg waste.

    PubMed

    Ackland, N R; Tannock, G A; Young, I F

    1985-04-01

    A device for the decontamination of large numbers of infected eggs which remain as by-products of vaccine production is described. Homogenates of infected eggs were heated to 60 degrees C and maintained at that temperature for 3 h in a specially constructed recirculation tank. The infectivity of all detectable influenza viruses and more than 99% of the bacteria associated with the homogenates was destroyed by this procedure. Eggshell material was separated from the proteins present in the homogenate at the end of the heating cycle by means of a cyclone separator. The proportions of all the amino acids, except cystine, in the proteins remaining in the suspension after the heating cycle were similar to that normally present in whole embryos. PMID:3839121

  1. Study of electrical and chemical propulsion systems for auxiliary propulsion of large space systems, volume 2

    NASA Technical Reports Server (NTRS)

    Smith, W. W.

    1981-01-01

    The five major tasks of the program are reported. Task 1 is a literature search followed by selection and definition of seven generic spacecraft classes. Task 2 covers the determination and description of important disturbance effects. Task 3 applies the disturbances to the generic spacecraft and adds maneuver and stationkeeping functions to define total auxiliary propulsion systems requirements for control. The important auxiliary propulsion system characteristics are identified and sensitivities to control functions and large space system characteristics determined. In Task 4, these sensitivities are quantified and the optimum auxiliary propulsion system characteristics determined. Task 5 compares the desired characteristics with those available for both electrical and chemical auxiliary propulsion systems to identify the directions technology advances should take.

  2. Critical joints in large composite primary aircraft structures. Volume 2: Technology demonstration test report

    NASA Technical Reports Server (NTRS)

    Bunin, Bruce L.

    1985-01-01

    A program was conducted to develop the technology for critical structural joints in composite wing structure that meets all the design requirements of a 1990 commercial transport aircraft. The results of four large composite multirow bolted joint tests are presented. The tests were conducted to demonstrate the technology for critical joints in highly loaded composite structure and to verify the analytical methods that were developed throughout the program. The test consisted of a wing skin-stringer transition specimen representing a stringer runout and skin splice on the wing lower surface at the side of the fuselage attachment. All tests were static tension tests. The composite material was Toray T-300 fiber with Ciba-Geigy 914 resin in 10 mil tape form. The splice members were metallic, using combinations of aluminum and titanium. Discussions are given of the test article, instrumentation, test setup, test procedures, and test results for each of the four specimens. Some of the analytical predictions are also included.

  3. A device for the nondestructive decontamination of large volumes of infected egg waste.

    PubMed Central

    Ackland, N R; Tannock, G A; Young, I F

    1985-01-01

    A device for the decontamination of large numbers of infected eggs which remain as by-products of vaccine production is described. Homogenates of infected eggs were heated to 60 degrees C and maintained at that temperature for 3 h in a specially constructed recirculation tank. The infectivity of all detectable influenza viruses and more than 99% of the bacteria associated with the homogenates was destroyed by this procedure. Eggshell material was separated from the proteins present in the homogenate at the end of the heating cycle by means of a cyclone separator. The proportions of all the amino acids, except cystine, in the proteins remaining in the suspension after the heating cycle were similar to that normally present in whole embryos. Images PMID:3839121

  4. A Heavy Ion Inertial Fusion Target with a Large Beam Spot

    NASA Astrophysics Data System (ADS)

    Callahan-Miller, Debra A.; Tabak, Max

    2000-10-01

    Because the achievable beam spot size for a heavy ion accelerator appropriate for heavy ion inertial fusion is uncertain, it is important to have a portfolio of target designs that cover the possible parameter space. While we have demonstrated that very high gains can be achieved with small spots [1], we are now concentrating on targets with larger spots and lower gains. Integrated Lasnex calculations of a target that is a hybrid between the ``end radiator'' [2] and the ``distributed radiator'' [3] predict that gain 60 is achievable from 6.7 MJ of beam energy in a 4.5 mm radius beam spot. Since accelerators are efficient (η ~ 25-35%), gain 60 is still adequate to get the η G > 10 required by the reactor. This ``hybrid'' target increases the beam spot radius by 66% over the distributed radiator target with an energy penalty of only 15%. [1] D. A. Callahan-Miller, M. Tabak, Phys. Plasmas, 7, 2083 (2000). [2] D. D.-M. Ho, J. A. Harte, M. Tabak, Nuc. Fusion, 38, 701 (1998). [3] M. Tabak, D. Callahan-Miller, Phys. Plasmas, 5, 1895 (1998).

  5. High-throughput screening of large volumes of whole blood using structured illumination and fluorescent on-chip imaging

    PubMed Central

    Arpali, Serap Altay; Arpali, Caglar; Coskun, Ahmet F.; Chiang, Hsin-Hao; Ozcan, Aydogan

    2012-01-01

    Undiluted blood samples are difficult to image in large volumes since blood constitutes a highly absorbing and scattering medium. As a result of this limitation, optical imaging of rare cells (e.g., circulating tumour cells) within unprocessed whole blood remains a challenge, demanding the use of special micro-fluidic technologies. Here we demonstrate a new fluorescent on-chip imaging modality that can rapidly screen large volumes of absorbing and scattering media such as undiluted whole blood samples for detection of fluorescent micro-objects at low concentrations (for example ≤ 50–100 particles/mL). In this high-throughput imaging modality, a large area micro-fluidic device (e.g., 7–18 cm2), which contains for example ~0.3–0.7 mL of undiluted whole blood sample, is directly positioned onto a wide-field opto-electronic sensor-array such that the fluorescent emission within the micro-channel can be detected without the use of any imaging lenses. This micro-fluidic device is then illuminated and laterally scanned with an array of Gaussian excitation spots, which is generated through a spatial light modulator. For each scanning position of this excitation array, a lensfree fluorescent image of the blood sample is captured using the opto-electronic sensor-array, resulting in a sequence of images (e.g., 144 lensfree frames captured in ~36 seconds) for the same sample chip. Digitally merging these lensfree fluorescent images based on a Maximum Intensity Projection (MIP) algorithm enabled us to significantly boost the signal-to-noise ratio (SNR) and contrast of the fluorescent micro-objects within whole blood, which normally remain undetected (i.e., hidden) using conventional uniform excitation schemes, involving plane wave illumination. This high-throughput on-chip imaging platform based on structured excitation could be useful for rare cell research by enabling rapid screening of large volume micro-fluidic devices that process whole blood and other optically

  6. Solar neutrino detection in a large volume double-phase liquid argon experiment

    NASA Astrophysics Data System (ADS)

    Franco, D.; Giganti, C.; Agnes, P.; Agostino, L.; Bottino, B.; Canci, N.; Davini, S.; De Cecco, S.; Fan, A.; Fiorillo, G.; Galbiati, C.; Goretti, A. M.; Hungerford, E. V.; Ianni, Al.; Ianni, An.; Jollet, C.; Marini, L.; Martoff, C. J.; Meregaglia, A.; Pagani, L.; Pallavicini, M.; Pantic, E.; Pocar, A.; Razeti, M.; Renshaw, A. L.; Rossi, B.; Rossi, N.; Suvorov, Y.; Testera, G.; Tonazzo, A.; Wang, H.; Zavatarelli, S.

    2016-08-01

    Precision measurements of solar neutrinos emitted by specific nuclear reaction chains in the Sun are of great interest for developing an improved understanding of star formation and evolution. Given the expected neutrino fluxes and known detection reactions, such measurements require detectors capable of collecting neutrino-electron scattering data in exposures on the order of 1 ktonne-yr, with good energy resolution and extremely low background. Two-phase liquid argon time projection chambers (LAr TPCs) are under development for direct Dark Matter WIMP searches, which possess very large sensitive mass, high scintillation light yield, good energy resolution, and good spatial resolution in all three cartesian directions. While enabling Dark Matter searches with sensitivity extending to the ``neutrino floor'' (given by the rate of nuclear recoil events from solar neutrino coherent scattering), such detectors could also enable precision measurements of solar neutrino fluxes using the neutrino-electron elastic scattering events. Modeling results are presented for the cosmogenic and radiogenic backgrounds affecting solar neutrino detection in a 300 tonne (100 tonne fiducial) LAr TPC operating at LNGS depth (3,800 meters of water equivalent). The results show that such a detector could measure the CNO neutrino rate with ~15% precision, and significantly improve the precision of the 7Be and pep neutrino rates compared to the currently available results from the Borexino organic liquid scintillator detector.

  7. Study of auxiliary propulsion requirements for large space systems. Volume 1: Executive summary

    NASA Technical Reports Server (NTRS)

    Smith, W. W.; Machles, G. W.

    1983-01-01

    An insight into auxiliary propulsion systems (APS) requirements for large space systems (LSS) launchable by a single shuttle is presented. In an effort to scope the APS requirements for LSS, a set of generic LSSs were defined. For each generic LSS class a specific structural configuration, representative of that most likely to serve the needs of the 1980's and 1990's was defined. The environmental disturbance forces and torques which would be acting on each specific structural configuration in LEO and GEO orbits were then determined. Auxiliary propulsion requirements were determined as a function of: generic class specific configuration, size and openness of structure, orbit, angle of orientation, correction frequency, duty cycle, number and location of thrusters and direction of thrusters and APS/LSS interactions. The results of this analysis were used to define the APS characteristics of: (1) number and distribution of thrusters, (2) thruster modulation, (3) thrust level, (4) mission energy requirements, (5) total APS mass component breakdown, and (6) state of the art adequacy/deficiency.

  8. The thermal-mechanical analysis of targets for the high volume production of molybdenum-99 using a low-enriched uranium metal foil

    NASA Astrophysics Data System (ADS)

    Turner, Kyler Kriens

    Molybdenum-99 diagnostic imaging is the most commonly practiced procedure in nuclear medicine today with the majority molybdenum-99 produced with proliferation sensitive HEU. International and domestic efforts to develop non-HEU production techniques have taking the first steps toward establishing a new non-HEU molybdenum-99 based supply chain. The focus of the research presented in this work is on the analysis of a new high U-235 density LEU based molybdenum-99 production target. Converting directly to LEU using current manufacturing techniques greatly reduces the molybdenum-99 yield per target making high volume production uneconomical. The LEU based foil target analyzed in this research increases the yield per target making economic high volume production with LEU possible. The research analyzed the thermal-mechanical response of an LEU foil target during irradiation. Thermal-mechanical studies focused on deflections and stresses to assess the probability of target failure. Simpler analytical models were used to determine the proper shape of the target and to benchmark the numerical modeling software. Numerical studies using Abaqus focused on analyzing various heating and cooling conditions and assessing the effects of curvature on the target. Finally, experiments were performed to simulate low power heating and further benchmark the models. The results from all of these analyses indicate a LEU foil target could survive irradiation depending on the conditions seen during irradiation.

  9. Captured metagenomics: large-scale targeting of genes based on ‘sequence capture’ reveals functional diversity in soils

    PubMed Central

    Manoharan, Lokeshwaran; Kushwaha, Sandeep K.; Hedlund, Katarina; Ahrén, Dag

    2015-01-01

    Microbial enzyme diversity is a key to understand many ecosystem processes. Whole metagenome sequencing (WMG) obtains information on functional genes, but it is costly and inefficient due to large amount of sequencing that is required. In this study, we have applied a captured metagenomics technique for functional genes in soil microorganisms, as an alternative to WMG. Large-scale targeting of functional genes, coding for enzymes related to organic matter degradation, was applied to two agricultural soil communities through captured metagenomics. Captured metagenomics uses custom-designed, hybridization-based oligonucleotide probes that enrich functional genes of interest in metagenomic libraries where only probe-bound DNA fragments are sequenced. The captured metagenomes were highly enriched with targeted genes while maintaining their target diversity and their taxonomic distribution correlated well with the traditional ribosomal sequencing. The captured metagenomes were highly enriched with genes related to organic matter degradation; at least five times more than similar, publicly available soil WMG projects. This target enrichment technique also preserves the functional representation of the soils, thereby facilitating comparative metagenomics projects. Here, we present the first study that applies the captured metagenomics approach in large scale, and this novel method allows deep investigations of central ecosystem processes by studying functional gene abundances. PMID:26490729

  10. On the automated definition of mobile target volumes from 4D-CT images for stereotactic body radiotherapy

    SciTech Connect

    Zhang Tiezhi; Orton, Nigel P.; Tome, Wolfgang A.

    2005-11-15

    Stereotactic body radiotherapy (SBRT) can be used to treat small lesions in the chest. A vacuum-based immobilization system is used in our clinic for SBRT, and a motion envelope is used in treatment planning. The purpose of this study is to automatically derive motion envelopes using deformable image registration of 4D-CT images, and to assess the effect of abdominal pressure on the motion envelopes. 4D-CT scans at ten phases were acquired prior to treatment for both free and restricted breathing using a vacuum-based immobilization system that includes an abdominal pressure pillow. To study the stability of the motion envelope over the course of treatment, a mid-treatment 4D-CT scan was obtained after delivery of the third fraction for two patients. The planning target volume excluding breathing motion (PTV{sub ex}) was defined on the image set at full exhalation phase and transformed into all other phases using displacement maps from deformable image registration. The motion envelope was obtained as the union of PTV{sub ex} masks of all phases. The ratios of the motion envelope to PTV{sub ex} volume ranged from 1.3 to 2.5. When pressure was applied, the ratios were reduced by as much as 29% compared to free breathing for some patients, but increased by up to 9% for others. The abdominal pressure pillow has more motion restriction effects on the anterior/inferior region of the lung. For one of the two patients for whom the 4D-CT scan was repeated at mid-treatment, the motion envelope was reproducible. However, for the other patient the tumor location and lung motion pattern significantly changed due to changes in the anatomy surrounding the tumor during the course of treatment, indicating that an image-guided approach to SBRT may increase the efficacy of this treatment.

  11. Residual Tumor After Neoadjuvant Chemoradiation Outside the Radiation Therapy Target Volume: A New Prognostic Factor for Survival in Esophageal Cancer

    SciTech Connect

    Muijs, Christina; Smit, Justin; Karrenbeld, Arend; Beukema, Jannet; Mul, Veronique; Dam, Go van; Hospers, Geke; Kluin, Phillip; Langendijk, Johannes; Plukker, John

    2014-03-15

    Purpose/Objective(s): The aim of this study was to analyze the accuracy of gross tumor volume (GTV) delineation and clinical target volume (CTV) margins for neoadjuvant chemoradiation therapy (neo-CRT) in esophageal carcinoma at pathologic examination and to determine the impact on survival. Methods and Materials: The study population consisted of 63 esophageal cancer patients treated with neo-CRT. GTV and CTV borders were demarcated in situ during surgery on the esophagus, using anatomical reference points to provide accurate information regarding tumor location at pathologic evaluation. To identify prognostic factors for disease-free survival (DFS) and overall survival (OS), a Cox regression analysis was performed. Results: After resection, macroscopic residual tumor was found outside the GTV in 7 patients (11%). Microscopic residual tumor was located outside the CTV in 9 patients (14%). The median follow-up was 15.6 months. With multivariate analysis, only microscopic tumor outside the CTV (hazard ratio [HR], 4.96; 95% confidence interval [CI], 1.03-15.36), and perineural growth (HR, 5.77; 95% CI, 1.27-26.13) were identified as independent prognostic factors for OS. The 1-year OS was 20% for patients with tumor outside the CTV and 86% for those without (P<.01). For DFS, microscopic tumor outside the CTV (HR, 5.92; 95% CI, 1.89-18.54) and ypN+ (HR, 3.36; 95% CI, 1.33-8.48) were identified as independent adverse prognostic factors. The 1-year DFS was 23% versus 77% for patients with or without tumor outside the CTV (P<.01). Conclusions: Microscopic tumor outside the CTV is associated with markedly worse OS after neo-CRT. This may either stress the importance of accurate tumor delineation or reflect aggressive tumor behavior requiring new adjuvant treatment modalities.

  12. Fabrication and testing of gas-filled targets for large-scale plasma experiments on nova

    SciTech Connect

    Stone, G.F.; Rivers, C.J.; Spragge, M.R.; Wallace, R.J.

    1996-06-01

    The proposed next-generation ICF facility, the National Ignition Facility (NIF) is designed to produce energy gain from x-ray heated {open_quotes}indirect-drive{close_quotes} fuel capsules. For indirect-drive targets, laser light heats the inside of the Au hohlraum wall and produces x rays which in turn heat and implode the capsule to produce fusion conditions in the fuel. Unlike Nova targets, in NIF-scale targets laser light will propagate through several millimeters of gas, producing a plasma, before impinging upon the Au hohlraum wall. The purpose of the gas-produced plasma is to provide sufficient pressure to keep the radiating Au surface from expanding excessively into the hohlraum cavity. Excessive expansion of the Au wall interacts with the laser pulse and degrades the drive symmetry of the capsule implosion. The authors have begun an experimental campaign on the Nova laser to study the effect of hohlraum gas on both laser-plasma interaction and implosion symmetry. In their current NIF target design, the calculated plasma electron temperature is T{sub e} {approx} 3 keV and the electron density is N{sub e} {approx} 10{sup 21}cm{sup {minus}3}.

  13. Setup Variations in Radiotherapy of Anal Cancer: Advantages of Target Volume Reduction Using Image-Guided Radiation Treatment

    SciTech Connect

    Chen Yijen; Suh, Steve; Nelson, Rebecca A.; Liu An; Pezner, Richard D.; Wong, Jeffrey Y.C.

    2012-09-01

    Purpose: To define setup variations in the radiation treatment (RT) of anal cancer and to report the advantages of image-guided RT (IGRT) in terms of reduction of target volume and treatment-related side effects. Methods and Materials: Twelve consecutive patients with anal cancer treated by combined chemoradiation by use of helical tomotherapy from March 2007 to November 2008 were selected. With patients immobilized and positioned in place, megavoltage computed tomography (MVCT) scans were performed before each treatment and were automatically registered to planning CT scans. Patients were shifted per the registration data and treated. A total of 365 MVCT scans were analyzed. The primary site received a median dose of 55 Gy. To evaluate the potential dosimetric advantage(s) of IGRT, cases were replanned according to Radiation Therapy Oncology Group 0529, with and without adding recommended setup variations from the current study. Results: Significant setup variations were observed throughout the course of RT. The standard deviations for systematic setup correction in the anterior-posterior (AP), lateral, and superior-inferior (SI) directions and roll rotation were 1.1, 3.6, and 3.2 mm, and 0.3 Degree-Sign , respectively. The average random setup variations were 3.8, 5.5, and 2.9 mm, and 0.5 Degree-Sign , respectively. Without daily IGRT, margins of 4.9, 11.1, and 8.5 mm in the AP, lateral, and SI directions would have been needed to ensure that the planning target volume (PTV) received {>=}95% of the prescribed dose. Conversely, daily IGRT required no extra margins on PTV and resulted in a significant reduction of V15 and V45 of intestine and V10 of pelvic bone marrow. Favorable toxicities were observed, except for acute hematologic toxicity. Conclusions: Daily MVCT scans before each treatment can effectively detect setup variations and thereby reduce PTV margins in the treatment of anal cancer. The use of concurrent chemotherapy and IGRT provided favorable

  14. Distance-to-Agreement Investigation of Tomotherapy's Bony Anatomy-Based Autoregistration and Planning Target Volume Contour-Based Optimization

    SciTech Connect

    Suh, Steve; Schultheiss, Timothy E.

    2013-03-01

    Purpose: To compare Tomotherapy's megavoltage computed tomography bony anatomy autoregistration with the best achievable registration, assuming no deformation and perfect knowledge of planning target volume (PTV) location. Methods and Materials: Distance-to-agreement (DTA) of the PTV was determined by applying a rigid-body shift to the PTV region of interest of the prostate from its reference position, assuming no deformations. Planning target volume region of interest of the prostate was extracted from the patient archives. The reference position was set by the 6 degrees of freedom (dof)—x, y, z, roll, pitch, and yaw—optimization results from the previous study at this institution. The DTA and the compensating parameters were calculated by the shift of the PTV from the reference 6-dof to the 4-dof—x, y, z, and roll—optimization. In this study, the effectiveness of Tomotherapy's 4-dof bony anatomy–based autoregistration was compared with the idealized 4-dof PTV contour-based optimization. Results: The maximum DTA (maxDTA) of the bony anatomy-based autoregistration was 3.2 ± 1.9 mm, with the maximum value of 8.0 mm. The maxDTA of the contour-based optimization was 1.8 ± 1.3 mm, with the maximum value of 5.7 mm. Comparison of Pearson correlation of the compensating parameters between the 2 4-dof optimization algorithms shows that there is a small but statistically significant correlation in y and z (0.236 and 0.300, respectively), whereas there is very weak correlation in x and roll (0.062 and 0.025, respectively). Conclusions: We find that there is an average improvement of approximately 1 mm in terms of maxDTA on the PTV going from 4-dof bony anatomy-based autoregistration to the 4-dof contour-based optimization. Pearson correlation analysis of the 2 4-dof optimizations suggests that uncertainties due to deformation and inadequate resolution account for much of the compensating parameters, but pitch variation also makes a statistically significant

  15. Early Miocene Kirka-Phrigian caldera, western Anatolia - an example of large volume silicic magma generation in extensional setting

    NASA Astrophysics Data System (ADS)

    Seghedi, Ioan; Helvacı, Cahit

    2014-05-01

    Large rhyolitic ignimbrite occurrences are close connected to the Early Miocene initiation of extensional processes in the central-west Anatolia along Taşvanlı-Afyon zones. Field correlations, petrographical, geochemical and geochronological data lead to a substantial reinterpretation of the ignimbrite surrounding Kırka area, known from its world-class borate deposits, as representing the climatic event of a caldera collapse, unknown up to now and newly named "Kırka-Phrigian caldera". The caldera, which is roughly oval (24 km x 15km) in shape, one of the largest in Turkey, is supposed to have been formed in a single stage collapse event, at ~19 Ma that generated huge volume extracaldera outflow ignimbrites. Transtensive/distensive tectonic stresses since 25 Ma ago resulted in the NNW-SSE elongation of the magma chamber and influenced the roughly elliptical shape of the subsided block (caldera floor) belonging to the apex of Eskişehir-Afyon-Isparta volcanic area. Intracaldera post-collapse sedimentation and volcanism (at ~ 18 Ma) was controlled through subsidence-related faults with generation of a series of volcanic structures (mainly domes) showing a large compositional range from saturated silicic rhyolites and crystal-rich trachytes to undersaturated lamproites. Such volcanic rock association is typical for lithospheric extension. In this scenario, enriched mantle components within the subcontinental lithospheric mantle will begin to melt via decompression melting during the initiation of extension. Interaction of these melts with crustal rocks, fractionation processes and crustal anatexis driven by the heat contained in the ascending mantle melts produced the silicic compositions in a large crustal reservoir. Such silicic melts generated the initial eruptions of Kırka-Phrigian caldera ignimbrites. The rock volume and geochemical evidence suggests that silicic volcanic rocks come from a long-lived magma chamber that evolved episodically; after caldera

  16. SU-E-T-379: Concave Approximations of Target Volume Dose Metrics for Intensity- Modulated Radiotherapy Treatment Planning

    SciTech Connect

    Xie, Y; Chen, Y; Wickerhauser, M; Deasy, J

    2014-06-01

    Purpose: The widely used treatment plan metric Dx (mimimum dose to the hottest x% by volume of the target volume) is simple to interpret and use, but is computationally poorly behaved (non-convex), this impedes its use in computationally efficient intensity-modulated radiotherapy (IMRT) treatment planning algorithms. We therefore searched for surrogate metrics that are concave, computationally efficient, and accurately correlated to Dx values in IMRT treatment plans. Methods: To find concave surrogates of D95—and more generally, Dx values with variable x values—we tested equations containing one or two generalized equivalent uniform dose (gEUD) functions. Fits were obtained by varying gEUD ‘a’ parameter values, as well as the linear equation coefficients. Fitting was performed using a dataset of dose-volume histograms from 498 de-identified head and neck IMRT treatment plans. Fit characteristics were tested using a crossvalidation process. Reported root-mean-square error values were averaged over the cross-validation shuffles. Results: As expected, the two-gEUD formula provided a superior fit, compared to the single-gEUD formula. The best approximation uses two gEUD terms: 16.25 x gEUD[a=0.45] – 15.30 x gEUD[a=1.75] – 0.69. The average root-mean-square error on repeated (70/30) cross validation was 0.94 Gy. In addition, a formula was found that reasonably approximates Dx for x between 80% and 96%. Conclusion: A simple concave function using two gEUD terms was found that correlates well with PTV D95s for these head and neck treatment plans. More generally, a formula was found that represents well the Dx for x values from 80% to 96%, thus providing a computationally efficient formula for use in treatment planning optimization. The formula may need to be adjusted for other institutions with different treatment planning protocols. We conclude that the strategy of replacing Dx values with gEUD-based formulas is promising.

  17. A dosimetric comparison of 3D-CRT, IMRT, and static tomotherapy with an SIB for large and small breast volumes

    SciTech Connect

    Michalski, Andrea; Atyeo, John; Cox, Jennifer; Rinks, Marianne; Morgia, Marita; Lamoury, Gillian

    2014-07-01

    Radiation therapy to the breast is a complex task, with many different techniques that can be employed to ensure adequate dose target coverage while minimizing doses to the organs at risk. This study compares the dose planning outcomes of 3 radiation treatment modalities, 3 dimensional conformal radiation therapy (3D-CRT), intensity-modulated radiation therapy (IMRT), and static tomotherapy, for left-sided whole-breast radiation treatment with a simultaneous integrated boost (SIB). Overall, 20 patients with left-sided breast cancer were separated into 2 cohorts, small and large, based on breast volume. Dose plans were produced for each patient using 3D-CRT, IMRT, and static tomotherapy. All patients were prescribed a dose of 45 Gy in 20 fractions to the breast with an SIB of 56 Gy in 20 fractions to the tumor bed and normalized so that D{sub 98%} > 95% of the prescription dose. Dosimetric comparisons were made between the 3 modalities and the interaction of patient size. All 3 modalities offered adequate planning target volume (PTV) coverage with D{sub 98%} > 95% and D{sub 2%} < 107%. Static tomotherapy offered significantly improved (p = 0.006) dose homogeneity to the PTV{sub boost} {sub eval} (0.079 ± 0.011) and breast minus the SIB volume (Breast{sub SIB}) (p < 0.001, 0.15 ± 0.03) compared with the PTV{sub boost} {sub eval} (0.085 ± 0.008, 0.088 ± 0.12) and Breast{sub SIB} (0.22 ± 0.05, 0.23 ± 0.03) for IMRT and 3D-CRT, respectively. Static tomotherapy also offered statistically significant reductions (p < 0.001) in doses to the ipsilateral lung mean dose of 6.79 ± 2.11 Gy compared with 7.75 ± 2.54 Gy and 8.29 ± 2.76 Gy for IMRT and 3D-CRT, respectively, and significantly (p < 0.001) reduced heart doses (mean = 2.83 ± 1.26 Gy) compared to both IMRT and 3D-CRT (mean = 3.70 ± 1.44 Gy and 3.91 ± 1.58 Gy). Static tomotherapy is the dosimetrically superior modality for the whole breast with an SIB compared with IMRT and 3D-CRT. IMRT is superior to 3D

  18. Development and Validation of a Concentration Method for the Detection of Influenza A Viruses from Large Volumes of Surface Water▿

    PubMed Central

    Deboosere, Nathalie; Horm, Srey Viseth; Pinon, Anthony; Gachet, Jessica; Coldefy, Chloé; Buchy, Philippe; Vialette, Michèle

    2011-01-01

    Contamination of lakes and ponds plays an essential role as a reservoir of avian influenza A virus (AIV) in the environment. A method to concentrate waterborne AIV is a prerequisite for the detection of virus present at low levels in water. The aim of this study was to develop and validate a method for the concentration and detection of infectious AIV from large volumes of surface water samples. Two filtration systems, glass wool and electropositive NanoCeram filter, were studied. The individual effects of filtration-elution and polyethylene glycol (PEG) concentration parameters on the recovery efficiency of the H1N1 strain from 10-liter surface water samples were assessed. An ultimate 1% recovery rate of infectious viruses was achieved with the optimal protocol, corresponding to filtration through glass wool, followed by a viral elution step and then a PEG concentration. This method was validated for the detection of highly pathogenic H5N1 strains from artificially contaminated larger water volumes, from 10 to up to 50 liters, from different sources. The viral recovery efficiencies ranged from 0.01% to 7.89% and from 3.63% to 13.79% with lake water and rainwater, respectively. A theoretical detection threshold of 2.25 × 102 TCID50 (50% tissue culture infectious dose) in the filtered volume was obtained for seeded lake waters by M gene reverse transcriptase PCR (RT-PCR). Moreover, the method was used successfully in field studies for the detection of naturally occurring influenza A viruses in lake water in France. PMID:21498756

  19. Does Size Really Matter? Analysis of the Effect of Large Fibroids and Uterine Volumes on Complication Rates of Uterine Artery Embolisation

    SciTech Connect

    Parthipun, A. A. Taylor, J.; Manyonda, I.; Belli, A. M.

    2010-10-15

    The purpose of this study was to determine whether there is a correlation between large uterine fibroid diameter, uterine volume, number of vials of embolic agent used and risk of complications from uterine artery embolisation (UAE). This was a prospective study involving 121 patients undergoing UAE embolisation for symptomatic uterine fibroids at a single institution. Patients were grouped according to diameter of largest fibroid and uterine volume. Results were also stratified according to the number of vials of embolic agent used and rate of complications. No statistical difference in complication rate was demonstrated between the two groups according to diameter of the largest fibroid (large fibroids were classified as {>=}10 cm; Fisher's exact test P = 1.00), and no statistical difference in complication rate was demonstrated according to uterine volume (large uterine volume was defined as {>=}750 cm{sup 3}; Fisher's exact test P = 0.70). 84 of the 121 patients had documentation of the number of vials used during the procedure. Patients were divided into two groups, with {>=}4 used defined as a large number of embolic agent. There was no statistical difference between these two groups and no associated increased risk of developing complications. This study showed no increased incidence of complications in women with large-diameter fibroids or uterine volumes as defined. In addition, there was no evidence of increased complications according to quantity of embolic material used. Therefore, UAE should be offered to women with large fibroids and uterine volumes.

  20. Cavitation-enhanced nonthermal ablation in deep brain targets: feasibility in a large animal model.

    PubMed

    Arvanitis, Costas D; Vykhodtseva, Natalia; Jolesz, Ferenc; Livingstone, Margaret; McDannold, Nathan

    2016-05-01

    OBJECT Transcranial MRI-guided focused ultrasound (TcMRgFUS) is an emerging noninvasive alternative to surgery and radiosurgery that is undergoing testing for tumor ablation and functional neurosurgery. The method is currently limited to central brain targets due to skull heating and other factors. An alternative ablative approach combines very low intensity ultrasound bursts and an intravenously administered microbubble agent to locally destroy the vasculature. The objective of this work was to investigate whether it is feasible to use this approach at deep brain targets near the skull base in nonhuman primates. METHODS In 4 rhesus macaques, targets near the skull base were ablated using a clinical TcMRgFUS system operating at 220 kHz. Low-duty-cycle ultrasound exposures (sonications) were applied for 5 minutes in conjunction with the ultrasound contrast agent Definity, which was administered as a bolus injection or continuous infusion. The acoustic power level was set to be near the inertial cavitation threshold, which was measured using passive monitoring of the acoustic emissions. The resulting tissue effects were investigated with MRI and with histological analysis performed 3 hours to 1 week after sonication. RESULTS Thirteen targets were sonicated in regions next to the optic tract in the 4 animals. Inertial cavitation, indicated by broadband acoustic emissions, occurred at acoustic pressure amplitudes ranging from 340 to 540 kPa. MRI analysis suggested that the lesions had a central region containing red blood cell extravasations that was surrounded by edema. Blood-brain barrier disruption was observed on contrast-enhanced MRI in the lesions and in a surrounding region corresponding to the prefocal area of the FUS system. In histology, lesions consisting of tissue undergoing ischemic necrosis were found in all regions that were sonicated above the inertial cavitation threshold. Tissue damage in prefocal areas was found in several cases, suggesting that in

  1. Plasma properties in a large-volume, cylindrical and asymmetric radio-frequency capacitively coupled industrial-prototype reactor

    NASA Astrophysics Data System (ADS)

    Lazović, Saša; Puač, Nevena; Spasić, Kosta; Malović, Gordana; Cvelbar, Uroš; Mozetič, Miran; Radetić, Maja; Petrović, Zoran Lj

    2013-02-01

    We have developed a large-volume low-pressure cylindrical plasma reactor with a size that matches industrial reactors for treatment of textiles. It was shown that it efficiently produces plasmas with only a small increase in power as compared with a similar reactor with 50 times smaller volume. Plasma generated at 13.56 MHz was stable from transition to streamers and capable of long-term continuous operation. An industrial-scale asymmetric cylindrical reactor of simple design and construction enabled good control over a wide range of active plasma species and ion concentrations. Detailed characterization of the discharge was performed using derivative, Langmuir and catalytic probes which enabled determination of the optimal sets of plasma parameters necessary for successful industry implementation and process control. Since neutral atomic oxygen plays a major role in many of the material processing applications, its spatial profile was measured using nickel catalytic probe over a wide range of plasma parameters. The spatial profiles show diffusion profiles with particle production close to the powered electrode and significant wall losses due to surface recombination. Oxygen atom densities range from 1019 m-3 near the powered electrode to 1017 m-3 near the wall. The concentrations of ions at the same time are changing from 1016 to the 1015 m-3 at the grounded chamber wall.

  2. Determination of pesticides in vegetables using large-volume injection column liquid chromatography-electrospray tandem mass spectrometry.

    PubMed

    Hogenboom, A C; Hofman, M P; Kok, S J; Niessen, W M; Brinkman, U A

    2000-09-15

    Direct injection of a large volume (900 microl) of a sample extract onto a liquid chromatographic (LC) column, LC separation and electrospray tandem mass spectrometric detection were used for the quantitative analysis of a wide polarity range of pesticides in carrots and potatoes. Rapid sample preparation involved extraction of a small amount of sample (2 g) with a small volume of organic solvent (3 ml), clean-up over a filter and dilution of the organic extract with the aqueous LC eluent. The extraction efficiency for the selected pesticides was studied using methanol, acetone and acetonitrile as solvents. Evaluation of the performance of the overall method, using extraction with acetonitrile and detection in the selected-reaction-monitoring mode, showed excellent linearity in the range of 2-100 microg/kg with limits of detection of 0.5-2 microg/kg for both types of vegetable. With relative standard deviations of the MS peak area measurements of less than 6.5% (n=8) the repeatability of the method was fully satisfactory. PMID:11045499

  3. Thermo-mechanical response of poly(methyl methacrylate) (PMMA) large volumes exposed to time-dependent environmental conditions

    NASA Astrophysics Data System (ADS)

    Fraldi, M.; Esposito, L.; Perrella, G.; Cutolo, A.

    2014-02-01

    Low thermal conductivity and elevated absorbance of large bulky volumes of poly(methyl methacrylate) (PMMA) exposed to moderately aggressive environmental conditions may cooperate to determine critical mechanical conditions, kindling unexpected high thermal stresses values which lead the material to failure. From the engineering point of view, this can be explained as the result of two concomitant phenomena which activate a cascade of events: very sharp thermal gradients engendered by transient thermal processes induced by cyclic environmental conditions, combined with significant bulk heat generation due to the high thermal inertia of massive PMMA volumes, in turn aggravating the steepness of the thermal gradients, may in fact ingenerate severe stress regimes, potentially undermining the structural stability of the material. Moving from these considerations, the present study is aimed to investigate possible rupture of PMMA blocks experiencing heating processes as a consequence of their exposure to outdoor cyclic environmental conditions. The problem is approached by means of both rigorous analytical arguments and the Finite Element based numerical methods, finally exploiting the theoretical outcomes to formulate a hypothesis which might explain the still unclear phenomenon of the sudden breaking of the PMMA structure, named Huge Wine Glass and designed by the world famous Japanese architect Toyo Ito, which occurred in Pescara (Italy) in 2009.

  4. Eruption and emplacement of flood basalt. An example from the large-volume Teepee Butte Member, Columbia River Basalt Group

    SciTech Connect

    Reidel, S.P. ); Tolan, T.L. )

    1992-12-01

    Flows of the Teepee Butte Member, Grande Ronde Basalt, issued from a vent system in southeastern Washington, northeastern Oregon, and western Idaho. Three distinct basalt flows were erupted: the Limekiln Rapids flow, the Joseph Creek flow, and the Pruitt Draw flow. Together these mappable flows cover more than 52,000 km[sup 2] and have a volume exceeding 5,000 km[sup 3]. A portion of the vent system for the Joseph Creek flow is exposed in cross section in Joseph Canyon, Washington; it is one of the best preserved Columbia River Basalt Group vent complexes known. The vent complex is about 1 km in cross section, 30 m high, and composed of deposits characteristic of Hawaiian-type volcanism. The vent is asymmetrical; the eastern rampart consists of intercalated pyroclastic deposits and thin pahoehoe flows; the western rampart is composed wholly of pahoehoe flows. Flows of the Teepee Butte Member are compositionally homogeneous and were emplaced as sheet flows, each having several local flow units. Our study supports the importance of linear vent systems and the westward Palouse Slope, along with the large-volume lava flows, in controlling the distribution of Columbia River Basalt Group flows. Other factors, including the number of active fissure segments and topography, modified the shape of the flows and the number of flow units. 45 refs., 19 figs., 2 tabs.

  5. Yardea Dacite -large-volume, high-temperature felsic volcanism from the Middle Proterozoic of South Australia

    SciTech Connect

    Creaser, R.A.; White, A.J.R. )

    1991-01-01

    The Yardea Dacite is a large-volume felsic volcanic unit from the Middle Proterozoic Gawler Range Volcanics of South Australia; it has been previously described as an ignimbrite. However, some samples contain no petrographic evidence for a pyroclastic origin, but have characteristics compatible with final crystallization from a nonfragmented magma. These samples may have erupted as lavas, but others are likely to be extremely densely welded ignimbrites, suggesting a compound nature for the unit. Geothermometry and phase equilibria indicate that the Yardea Dacite originated from a high-temperature ({approximately}1,000{degree}C) felsic magma with a low water content ({le}2%). The Yardea Dacite is not associated with a known caldera of the Valles type, and shares many characteristics of recently described Cenozoic felsic volcanic rocks from the western United States, interpreted as rheoignimbrites or as unusually extensive lavas.

  6. A 5 kA pulsed power supply for inductive and plasma loads in large volume plasma device

    NASA Astrophysics Data System (ADS)

    Srivastava, P. K.; Singh, S. K.; Sanyasi, A. K.; Awasthi, L. M.; Mattoo, S. K.

    2016-07-01

    This paper describes 5 kA, 12 ms pulsed power supply for inductive load of Electron Energy Filter (EEF) in large volume plasma device. The power supply is based upon the principle of rapid sourcing of energy from the capacitor bank (2.8 F/200 V) by using a static switch, comprising of ten Insulated Gate Bipolar Transistors (IGBTs). A suitable mechanism is developed to ensure equal sharing of current and uniform power distribution during the operation of these IGBTs. Safe commutation of power to the EEF is ensured by the proper optimization of its components and by the introduction of over voltage protection (>6 kV) using an indigenously designed snubber circuit. Various time sequences relevant to different actions of power supply, viz., pulse width control and repetition rate, are realized through optically isolated computer controlled interface.

  7. Determination of synthetic phenolic antioxidants in edible oils using microvial insert large volume injection gas-chromatography.

    PubMed

    Cacho, Juan Ignacio; Campillo, Natalia; Viñas, Pilar; Hernández-Córdoba, Manuel

    2016-06-01

    Three synthetic phenolic antioxidants, butylated hydroxyanisole (BHA), butylated hydroxytoluene (BHT) and tert-butyl hydroquinone (TBHQ), were determined in different edible vegetable oil samples. The analyses were carried out by gas chromatography-mass spectrometry (GC-MS) using microvial insert large volume injection (LVI). Several parameters affecting this sample introduction step, such as temperatures, times and gas flows, were optimised. Quantification was carried out by the matrix-matched calibration method using carvacrol as internal standard, providing quantification limits between 0.08 and 0.10 ng g(-1), depending on the compound. The three phenolic compounds were detected in several of the samples, BHT being the most frequently found. Recovery assays for oil samples spiked at two concentration levels, 2.5 and 10 ng g(-1), provided recoveries in the 86-115% range. PMID:26830586

  8. A 5 kA pulsed power supply for inductive and plasma loads in large volume plasma device.

    PubMed

    Srivastava, P K; Singh, S K; Sanyasi, A K; Awasthi, L M; Mattoo, S K

    2016-07-01

    This paper describes 5 kA, 12 ms pulsed power supply for inductive load of Electron Energy Filter (EEF) in large volume plasma device. The power supply is based upon the principle of rapid sourcing of energy from the capacitor bank (2.8 F/200 V) by using a static switch, comprising of ten Insulated Gate Bipolar Transistors (IGBTs). A suitable mechanism is developed to ensure equal sharing of current and uniform power distribution during the operation of these IGBTs. Safe commutation of power to the EEF is ensured by the proper optimization