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Sample records for lutjanus perciformes lutjanidae

  1. [Reproductive biology of the golden snapper Lutjanus inermis (Perciformes: Lutjanidae) in the central Mexican Pacific].

    PubMed

    Lucano-Ramírez, Gabriela; Ruiz-Ramírez, Salvador; González-Sansón, Gaspar; Ceballos-Vázquez, Bertha Patricia

    2012-03-01

    Reproductive aspects and information on the effect of fishery activities over this species stock are scarce, despite the imperative need of effective protection and resource management programs. To support the possible establishment of closed seasons and catch levels for the area, our study aimed to evaluate the spawning season of the Golden snapper (Lutjanus inermis). For this, fish caught by artisanal fisheries in the Navidad, Tenacatita and Chamela bays (Jalisco, Mexico) were sampled monthly from 1999-2008, and analyzed sex ratios, spawning season and size at first maturity. A total of 311 (53.1%) females and 275 (46.9%) males were caught, and the observed sex ratio was 1:0.88. The total length range was 14.4-37.0cm and total weight range from 48-575g. The length at first maturity was 23.9cm TL for females and 23.6cm TL for males. The gonadosomatic index showed two principal reproductive periods in the year (February-April and September-November), when the largest number of mature gonads were observed. Ovaries were of asynchronic development type and seven oocyte development stages were identified. Testicles showed lobular development and spermatozoa were observed in the center of the cysts and in the collecting ducts. It is important to mention that our results support the current suitable exploitation of this species in the area. PMID:22458233

  2. Diet and food partitioning between juveniles of mutton Lutjanus analis, dog Lutjanus jocu and lane Lutjanus synagris snappers (Perciformes: Lutjanidae) in a mangrove-fringed estuarine environment.

    PubMed

    Pimentel, C R; Joyeux, J-C

    2010-06-01

    Diet of juvenile mutton Lutjanus analis, dog Lutjanus jocu and lane Lutjanus synagris snappers were studied in the tropical Brazilian estuarine system of the Piraquê-açú and Piraquê-mirim Rivers to determine how these species share the resources in this restricted space. The three species prey principally upon Peracarida (L. synagris: relative importance index I(RIc) = 29%), Natantia (L. analis and L. synagris: I(RIc) = 39 and 38%, respectively), Reptantia (L. analis and L. jocu: I(RIc) = 28 and 43%, respectively) and Teleostei (L. jocu: I(RIc) = 24%). The three species use estuaries as nursery habitats but food overlap was not biologically significant due to a combination of interspecific differences in size, spatial distribution, microhabitat preferences and seasonal patterns of abundance and prey choice. Large marine protected areas incorporating essential habitats for all life stages are suggested to be the best tool for the management of these economically important species. PMID:20557594

  3. Mitogenomes of genus Pristipomoides, Lutjanus and Pterocaesio confirm Caesionidae nests in Lutjanidae.

    PubMed

    Guo, Yusong; Bai, Qin; Yan, Tao; Wang, Zhongduo; Liu, Chuwu

    2016-05-01

    In this study, the complete mitochondrial genome of Goldbanded jobfish (Perciformes: Lutjanidae: Etelinae: Pristipomoides multidens) was sequenced using long-PCR amplification (Accession No.: KF430626). The mitochondrial genome is highly homologous to those of other teleosts. Consensus tree based on phylogeny analysis of nucleotide sequences using the protein-coding regions combined sequences (apart from ND6) in 11 species supports the fact that Pristipomoides multidens of Etelinae and the cluster of Subfamily Lutjaninae remain the sister relationship, consistent with the traditional taxonomy, while the fusiliers (Pterocaesio tile) of family Caesionidae nested within the genus Lutjanus of family Lutjanidae and showed more closely relationship with the non-reddish snappers cluster including L. russellii and L. argentimaculatus. Conclusively, this mitogenomic phylogeny indicates that the Caesionidae is a synonym of family Lutjanidae. Given the morphologic and feeding diversity, we hypothesize that the variation of feeding systems of genus Lutjanus may drive the speciation of snappers and fusiliers. PMID:25423518

  4. Lack of Spatial Subdivision for the Snapper Lutjanus purpureus (Lutjanidae - Perciformes) from Southwest Atlantic Based on Multi-Locus Analyses.

    PubMed

    da Silva, Raimundo; Sampaio, Iracilda; Schneider, Horacio; Gomes, Grazielle

    2016-01-01

    The Caribbean snapper Lutjanus purpureus is a marine species fish commonly found associated with rocky seabeds and is widely distributed along of Western Atlantic. Data on stock delineation and stock recognition are essential for establishing conservation measures for commercially fished species. However, few studies have investigated the population genetic structure of this economically valuable species, and previous studies (based on only a portion of the mitochondrial DNA) provide an incomplete picture. The present study used a multi-locus approach (12 segments of mitochondrial and nuclear DNA) to elucidate the levels of genetic diversity and genetic connectivity of L. purpureus populations and their demographic history. L. purpureus has high levels of genetic diversity, which probably implies in high effective population sizes values for the species. The data show that this species is genetically homogeneous throughout the geographic region analyzed, most likely as a result of dispersal during larval phase. Regarding demographic history, a historical population growth event occurred, likely due to sea level changes during the Pleistocene. PMID:27556738

  5. A new species of Euryhaliotrematoides Plaisance & Kritsky, 2004 (Monogenea: Dactylogyridae) from the gills of the spotted rose snapper Lutjanus guttatus (Steindachner) (Perciformes: Lutjanidae).

    PubMed

    Soler-Jiménez, Lilia C; García-Gasca, Alejandra; Fajer-Ávila, Emma J

    2012-06-01

    Euryhaliotrematoides mehen n. sp. (Monogenea: Dactylogyridae) is described based on specimens collected from the gills of the spotted rose snapper Lutjanus guttatus (Steindachner) off Mazatlan, Sinaloa, on the northwestern coast of Mexico. The synapomorphy of this genus is the presence of a funnel-shaped base of the male copulatory organ. This new species differs from all other species of the genus by possessing a male copulatory organ with a base with a thickened margin and a membranous accessory piece resembling a scarf and covering about 60% of its distal region. PCR products of the 28S rRNA (831 bp) and 18S rRNA (662 bp) genes were sequenced and submitted to GenBank (accession numbers HQ615997 and JF938069, respectively). BLASTn searches revealed no 100% identical hits with the previously registered monogenean sequences. PMID:22581247

  6. Lack of Spatial Subdivision for the Snapper Lutjanus purpureus (LutjanidaePerciformes) from Southwest Atlantic Based on Multi-Locus Analyses

    PubMed Central

    Sampaio, Iracilda; Schneider, Horacio

    2016-01-01

    The Caribbean snapper Lutjanus purpureus is a marine species fish commonly found associated with rocky seabeds and is widely distributed along of Western Atlantic. Data on stock delineation and stock recognition are essential for establishing conservation measures for commercially fished species. However, few studies have investigated the population genetic structure of this economically valuable species, and previous studies (based on only a portion of the mitochondrial DNA) provide an incomplete picture. The present study used a multi-locus approach (12 segments of mitochondrial and nuclear DNA) to elucidate the levels of genetic diversity and genetic connectivity of L. purpureus populations and their demographic history. L. purpureus has high levels of genetic diversity, which probably implies in high effective population sizes values for the species. The data show that this species is genetically homogeneous throughout the geographic region analyzed, most likely as a result of dispersal during larval phase. Regarding demographic history, a historical population growth event occurred, likely due to sea level changes during the Pleistocene. PMID:27556738

  7. Dactylogyrids (Monogenoidea: Polyonchoinea) parasitising the gills of snappers (Perciformes: Lutjanidae): species of Euryhaliotrema Kritsky & Boeger, 2002 from the golden snapper Lutjanus johnii (Bloch) off northern Australia, with a redescription of Euryhaliotrema johni (Tripathi, 1959) and descriptions of two new species.

    PubMed

    Kritsky, Delane C; Diggles, Ben K

    2014-01-01

    Three species of Euryhaliotrema Kritsky & Boeger, 2002 (Monogenoidea: Dactylogyridae) were collected from the gills of four golden snapper Lutjanus johnii (Bloch) (Lutjanidae) from the marine and brackish waters off Darwin, Northern Territory, Australia. Type-specimens of Ancyrocephalus johni Tripathi, 1959 apparently have not survived and the possibility existed that the species was based on specimens representing more than one species. Euryhaliotrema johni (Tripathi, 1959) (sensu Young, 1968) was redescribed and determined to most likely represent A. johni, originally described from the River Hooghly, Diamond Harbour, India. Two new species were described. Euryhaliotrema longibaculoides n. sp. was most similar to Euryhaliotrema longibaculum (Zhukov, 1976) Kritsky & Boeger, 2002 from Lutjanus spp. from the western Atlantic Ocean. It differed from E. longibaculum by having a male copulatory organ (MCO) with an elongate comparatively delicate shaft and a bulbous base (MCO U- or J-shaped with funnel-shaped base in E. longibaculum). Based on the comparative morphology of the haptoral sclerites, Euryhaliotrema lisae n. sp. was most similar to Euryhaliotrema cryptophallus Kritsky & Yang, 2012 from the gills of the mangrove red snapper Lutjanus argentimaculatus (Forsskål) from the South China Sea. Euryhaliotrema lisae differed from E. cryptophallus by having a copulatory complex with an obvious weakly sclerotised J-shaped MCO (MCO cryptic, delicate, and with a shaft comprising about one counterclockwise ring in E. cryptophallus). PMID:24395576

  8. Three new gonad-infecting species of Philometra (Nematoda: Philometridae) parasitic in Lutjanus spp. (Lutjanidae) in the northern Gulf of Mexico off Florida, USA.

    PubMed

    Moravec, Frantisek; Bakenhaster, Micah; Fajer-Avila, Emma J

    2014-08-01

    Based on light and scanning electron microscopical studies, three new gonad-infecting species of Philometra Costa, 1845 (Nematoda: Philometridae) are described from marine fishes of the genus Lutjanus Bloch (Perciformes: Lutjanidae) in the northern Gulf of Mexico: P. longispicula sp. n. from the ovary of the northern red snapper L. campechanus (Poey) (type host) and silk snapper L. vivanus (Cuvier); P. latispicula sp. n. from the ovary and rarely testes of the grey snapper L. griseus (Linnaeus); and P. synagridis sp. n. (only males available) from the ovary of the lane snapper Lutjanus synagris (Linnaeus). These species are mainly characterised by the lengths of spicules (378-690 microm, 135-144 microm and 186-219 microm, respectively) and spicule shapes, structure of the distal portion of the gubernaculum and the structure of the male caudal end. These are the first valid, nominal species of gonad-infecting philometrids reported from fishes of the family Lutjanidae in the western Atlantic region. PMID:25185406

  9. Candidatus Renichlamydia lutjani, a Gram-negative bacterium in internal organs of blue striped snapper Lutjanus kasmira from Hawaii.

    USGS Publications Warehouse

    Corsaro, Daniele; Work, Thierry M.

    2012-01-01

    The blue-striped snapper Lutjanus kasmira (Perciformes, Lutjanidae) are cosmopolitan in the Indo-Pacific but were introduced into Oahu, Hawaii, USA, in the 1950s and have since colonized most of the archipelago. Studies of microparasites in blue-striped snappers from Hawaii revealed chlamydia-like organisms (CLO) infecting the spleen and kidney, characterized by intracellular basophilic granular inclusions containing Gram-negative and Gimenez-positive bacteria similar in appearance to epitheliocysts when seen under light microscopy. We provide molecular evidence that CLO are a new member of Chlamydiae, i.e. Candidatus Renichlamydia lutjani, that represents the first reported case of chlamydial infection in organs other than the gill in fishes.

  10. Monogenea of marine fishes from Hainan Island, China. VIII. Two new species of Euryhaliotrema Kritsky & Boeger, 2002 (Dactylogyridae) from Lutjanus argentimaculatus (Teleostei: Lutjanidae).

    PubMed

    Jun, Pan; Jianying, Zhang

    2006-06-01

    This paper reports two new species of Euryhaliotrema Kritsky & Boeger, 2002 collected from the gills of Lutjanus argentimaculatus (Forsskål). E. xinyingense n. sp. is similar to Euryhaliotrema atlanticum Kritsky & Boeger, 2002 in the structure of copulatory apparatus, but differs from the latter in the shape of anchors and the structure of vagina. E. hainanense n. sp. also closely resembles E. atlanticum Kritsky & Boeger, 2002, but differs from the latter in the structure of haptor and the shape of accessory piece. PMID:16612651

  11. The microecology of dactylogyrids (Monogenea: Dactylogyridae) on the gills of wild spotted rose snapper Lutjanus guttatus (Lutjanidae) from Mazatlan Bay, Mexico.

    PubMed

    Soler-Jiménez, Lilia C; Fajer-Avila, Emma J

    2012-02-01

    The spatial distribution and coexistence of monogenean dactylogyrids was assessed on the gills of 63 specimens of wild spotted rose snapper, Lutjanus guttatus (Steindachner), caught in the Mazatlan Bay, Sinaloa, Mexico. Five species are reported: Euryhaliotrema perezponcei Garcia-Vargas, Fajer-Avila et Lamothe-Argumedo, 2008, Euryhaliotrematoides sp., Haliotrematoides spinatus Kritsky et Mendoza-Franco, 2009, H. plectridium Kritsky et Mendoza-Franco, 2009, and H. guttati Garcia-Vargas, Fajer-Avila et Lamothe-Argumedo, 2008. All except E. perezponcei and H. guttati represent new geographical records for the Pacific coast. The most prevalent dactylogyrid species was E. perezponcei (100%), H. plectridium and H. spinatus had > 80% prevalence, and H. guttati and Euryhaliotrematoides sp. had the lowest prevalence. The mean abundance of H. plectridium and E. perezponcei was close to 60 parasites/fish, whereas Euryhaliotrematoides sp. and H. guttati had the lowest abundance. The dactylogyrid species exhibited a tendency for attachment to gill arch 2: 25% attachment occurring on gill arch 1, 30% on 2, 27% on 3 and 18% on 4, and showed a significant preference for the central sector of the gill (42%). Haliotrematoides plectridium had a preference for attachment to gill arches 2 and 3 and the central sector. Haliotrematoides spinatus tended to settle on the gill arches 2 and 3 and had a preference for the central sector. Euryhaliotrema perezponcei tended to settle on the gill arches 1 and 2 and the anterior gill sector. Euryhaliotrematoides sp. and H. guttati did not show a preference for any gill arch or sector. The intraspecific aggregation was stronger than the interspecific aggregation, indicating that all the dactylogyrid species on spotted rose snapper were aggregated, and there was no evidence of competition among the species. PMID:22439428

  12. First report of gastrocotylinean post-oncomiracidia (Platyhelminthes: Monogenoidea: Heteronchoinea) on gills of flyingfish (Exocoetidae), snapper (Lutjanidae), dolphinfish (Coryphaenidae), and amberjack (Carangidae) from the Gulf of Mexico: decoy hosts and the dilution effect.

    PubMed

    Kritsky, Delane C; Bullard, Stephen A; Bakenhaster, Micah D

    2011-09-01

    Larvae, identified as post-oncomiracidia of the suborder Gastrocotylinea (Monogenoidea), were collected from formalin-fixed gills excised from six species of marine fishes captured from the Gulf of Mexico off Mississippi and Florida: common dolphinfish, Coryphaena hippurus and pompano dolphinfish, Coryphaena equiselis (both Perciformes, Coryphaenidae); gray snapper, Lutjanus griseus (Perciformes, Lutjanidae); greater amberjack, Seriola dumerili (Perciformes, Carangidae); and Atlantic flyingfish, Cheilopogon melanurus and sailfin flyingfish, Parexocoetus hillianus (both Beloniformes and Exocoetidae). Based on a combination of diagnostic morphological features, the specimens were divided into two basic forms, each of which was further subdivided into two morphotypes. No gastrocotylinean post-oncomiracidium had been reported previously from these hosts. Of the six host species, only C. hippurus serves as a host (unconfirmed) for the adult of a gastrocotylinean species, suggesting that the recorded fishes from the Gulf of Mexico comprise dead-end hosts acting as decoys for the oncomiracidia. These comparatively non-susceptible "decoy hosts" apparently dilute the susceptible fish-host population and by intercepting infective larvae (oncomiracidia) decrease the abundance of parasites on their typical hosts. PMID:21497672

  13. Life-stages, exploitation status and habitat use of Lutjanus goreensis (Perciformes: Lutjanidae) in coastal marine environments of Lagos, SW Nigeria.

    PubMed

    Kafayat, A Fakoya; Martins, A Anetekhai; Shehu, L Akintola; Abdulwakil, O Sabal; Abass, Mikhail A

    2015-03-01

    The Gorean snapper, Lutanus goreensis is an important component of artisanal fisheries and trawl landings in the Gulf of Guinea. Despite its economic importance, there is a dearth of information on size structure and life history strategies of the species. Therefore, the objectives of this study were to provide baseline data on the life stages, exploitation status and habitat use for the species in Nigeria. Monthly samples were obtained from artisanal and trawl catches in Five Cowrie Creek and Lagos coastal waters between December 2008 and December 2010, respectively. Length-frequency distributions of the fishes caught were analysed to provide preliminary information on mean and modal lengths at capture and life-history strategies based on habitat use and estuarine-dependency for L. goreensis. A total of 822 specimens of L. goreensis were collected from Five Cowrie Creek while 377 specimens were collected from Lagos coastal waters. Total length varied between 7.90-34.90 cm for creek samples and from 21.90-56.10 cm for marine samples. Length-frequency histograms showed polymodal size distributions in creek and marine samples. Length-frequency distributions of L. goreensis showed a high abundance ofjuveniles (<20 cm) and sub-adults (20-35 cm) which accounted for 84.1% and 68.4% of creek and marine samples examined, respectively. For the creek samples, fish in modal length class of 13.00-13.99 cm were the most exploited while in the marine samples, length classes of 29.00-30.99 cm and 31.00-32.99cm constituted the most frequently exploited fishes. Increase in total lengths from the creek (mean +/- SD; 16.19 +/- 3.73 cm) to the marine habitat samples (32.89 +/- 6.14 cm) indicated ontogenetic shift in habitat use. Occurrence of a predominant juvenile population in Five Cowrie Creek by L. goreensis suggests estuarine-dependency and is indicative of a temporary juvenile habitat or a migratory corridor. In conclusion, data from the presently reported study and previous studies demonstrated that juvenile L. goreensis displays estuarine dependency and habitat flexibility. Hence, this underscores the importance of preserving estuarine environments as essential fish habitats to prevent overfishing. The study also concludes that the species is vulnerable to recruitment overfishing in the marine environment especially as a consequence of shrimping. Consequently, it advocates for ban on all fishing activities during peak spawning periods in breeding grounds and shrimp ground assemblage. PMID:26299125

  14. Validity of a blue stripe snapper, Lutjanus octolineatus (Cuvier 1828) and a related species, L. bengalensis (Bloch 1790) with a new species (Pisces; Lutjanidae) from the Arabian Sea.

    PubMed

    Iwatsuki, Yukio; Al-Mamry, Juma M; Heemstra, Phillip C

    2016-01-01

    Lutjanus octolineatus (Cuvier 1828), previously considered a junior synonym of Lutjanus bengalensis (Bloch 1790), is shown to be a valid species and lectotypes are designated. Both species are redescribed. The two species have overlapping distributions in the Indian Ocean, but are clearly separable by different dorsal-fin spine counts, blue-striped pattern on the body and the presence or absence of a subocular extension of cheek scales. Lutjanus octovittata (Valenciennes 1830), formerly assigned to synonymy of L. bengalensis, is considered a junior synonym of L. octolineatus based on examination of the holotype. Lutjanus sapphirolineatus n. sp., a species formerly misidentified as L. bengalensis, is described based on 10 specimens from Oman and Somalia. The new species differs from the three species above by a combination of different characters. Analysis of the mitochondrial cytochrome c oxidase subunit 1 (CO1, 603 bp) genetic marker, also strongly supports the validity of each species of the blue-striped snapper complex as distinct. PMID:27394598

  15. Two new species of Euryhaliotrema Kritsky et Boeger, 2002 (Monogenea: Dactylogyridae) from Lutjanus russellii (Bleeker) and L. argentimaculatus (Forsskål) (Teleostei: Lutjanidae) in the South China Sea.

    PubMed

    Sun, Yuan; Yang, Tingbao

    2015-01-01

    Euryhaliotrema russellum sp. n. and Euryhaliotrema tenuiaccessorium sp. n. are described from the gills of Lutjanus russellii (Bleeker) and L. argentimaculatus (Forsskål), respectively, in the South China Sea. Euryhaliotrema russellum sp. n. differs from all other members of Euryhaliotrema Kritsky et Boeger, 2002 by its unique male copulatory organ, a straight tube with a bulbous base and without an accessory piece. Euryhaliotrema tenuiaccessorium sp. n. differs from its congeners by having a copulatory organ with a bulbous base, a meandering copulatory tube with clockwise coil having less than one complete ring, and a slender accessory piece along the middle length of the copulatory tube. All species of Euryhaliotrema are listed and divided to three groups based on morpholgy of the male copulatory organ. PMID:26278378

  16. New tissue-dwelling species of Philometra Costa, 1845 and Philometroides Yamaguti, 1935 (Nematoda: Philometridae) from marine perciform fishes off the northern coast of Australia.

    PubMed

    Moravec, František; Barton, Diane P

    2016-09-01

    Based on light and scanning electron microscopical studies, three new species of philometrids (Nematoda: Philometridae) are described from females collected in marine perciform fishes off the northern coast of Australia: Philometra gracilis n. sp. and Philometroides branchiarum n. sp. from tissues behind the gills and gill arches, respectively, of the John's snapper Lutjanus johnii (Bloch) (Lutjanidae), and Philometroides stomachicus n. sp. from the stomach wall of the blackspotted croaker Protonibea diacanthus (Lacépède) (Sciaenidae). Philometra gracilis differs from other congeners described from the Lutjanidae mainly in the presence of large caudal projections, short gravid females (28-42 mm long), the oesophageal gland extending anteriorly far anterior to the level of the nerve-ring, the site in the host and its geographical distribution. Philometroides branchiarum is mainly characterised by the possession of conspicuous, sclerotised oesophageal teeth and very short gravid females (6-8 mm long), whereas P. stomachicus can be differentiated by the body length of gravid females (85-90 mm), the length of the oesophagus (2.67 mm) representing 3% of the body length, the maximum width/body length ratio of gravid females (1:28-32), cuticular bosses densely distributed throughout the body but absent from the oesophageal region, the absence of oesophageal teeth and caudal projections, and the site in the host. The presence of P. gracilis and P. branchiarum in L. johnii and that of P. stomachicus in P. diacanthus confirm the possibility of the coexistence of more philometrid species in different sites within sympatric specimens of one and the same definitive host. PMID:27522363

  17. Ethnobiology of snappers (Lutjanidae): target species and suggestions for management.

    PubMed

    Begossi, Alpina; Salivonchyk, Svetlana V; Araujo, Luciana G; Andreoli, Tainá B; Clauzet, Mariana; Martinelli, Claudia M; Ferreira, Allan G I; Oliveira, Luiz E C; Silvano, Renato A M

    2011-01-01

    In this study, we sought to investigate the biology (diet and reproduction) and ethnobiology (fishers knowledge and fishing spots used to catch snappers) of five species of snappers (Lutjanidae), including Lutjanus analis, Lutjanus synagris, Lutjanus vivanus, Ocyurus chrysurus, and Romboplites saliens at five sites along the northeast (Riacho Doce, Maceió in Alagoas State, and Porto do Sauípe, Entre Rios at Bahia State) and the southeast (SE) Brazilian coast (Paraty and Rio de Janeiro cities at Rio de Janeiro State, and Bertioga, at São Paulo State.).We collected 288 snappers and interviewed 86 fishermen. The stomach contents of each fish were examined and macroscopic gonad analysis was performed. Snappers are very important for the fisheries of NE Brazil, and our results indicated that some populations, such as mutton snapper (L. analis) and lane snapper (L. synagris), are being caught when they are too young, at early juvenile stages.Local knowledge has been shown to be a powerful tool for determining appropriate policies regarding management of target species, and artisanal fishermen can be included in management processes. Other suggestions for managing the fisheries are discussed, including proposals that could provide motivation for artisanal fishermen to participate in programs to conserve resources, such as co-management approaches that utilize local knowledge, the establishment of fishing seasons, and compensation of fishermen, through 'payment for environmental services'. These suggestions may enhance the participation of local artisanal fishermen in moving to a more realistic and less top-down management approach of the fish population. PMID:21410969

  18. Ethnobiology of snappers (Lutjanidae): target species and suggestions for management

    PubMed Central

    2011-01-01

    In this study, we sought to investigate the biology (diet and reproduction) and ethnobiology (fishers knowledge and fishing spots used to catch snappers) of five species of snappers (Lutjanidae), including Lutjanus analis, Lutjanus synagris, Lutjanus vivanus, Ocyurus chrysurus, and Romboplites saliens at five sites along the northeast (Riacho Doce, Maceió in Alagoas State, and Porto do Sauípe, Entre Rios at Bahia State) and the southeast (SE) Brazilian coast (Paraty and Rio de Janeiro cities at Rio de Janeiro State, and Bertioga, at São Paulo State.). We collected 288 snappers and interviewed 86 fishermen. The stomach contents of each fish were examined and macroscopic gonad analysis was performed. Snappers are very important for the fisheries of NE Brazil, and our results indicated that some populations, such as mutton snapper (L. analis) and lane snapper (L. synagris), are being caught when they are too young, at early juvenile stages. Local knowledge has been shown to be a powerful tool for determining appropriate policies regarding management of target species, and artisanal fishermen can be included in management processes. Other suggestions for managing the fisheries are discussed, including proposals that could provide motivation for artisanal fishermen to participate in programs to conserve resources, such as co-management approaches that utilize local knowledge, the establishment of fishing seasons, and compensation of fishermen, through 'payment for environmental services'. These suggestions may enhance the participation of local artisanal fishermen in moving to a more realistic and less top-down management approach of the fish population. PMID:21410969

  19. Metabolic acceleration in Mediterranean Perciformes

    NASA Astrophysics Data System (ADS)

    Lika, Konstadia; Kooijman, Sebastiaan A. L. M.; Papandroulakis, Nikos

    2014-11-01

    Larval stages are considered the most critical of fish development. During a very short period of time (2 to 3 months), larvae undergo major morphoanatomical and functional changes in order to transform into juveniles while remaining functioning (developing, eating, surviving). Depending on species and environmental conditions, patterns in larval development may vary. We study the patterns of larval development for nine fish species of Perciformes reared under aquaculture conditions and compare them in terms of species-specific parameters derived from DEB theory. We extended the standard DEB model to include metabolic acceleration during the larval period, where maximum specific assimilation and energy conductance increase with length between birth and metabolic metamorphosis. Metabolic acceleration has as a consequence that larvae initially grow slower than juveniles and adults. Our results indicate that the species with higher acceleration have lower growth rates at birth and they also suggest that metabolic acceleration is related to spawning season. High metabolic acceleration of demersal species is associated with summer-autumn spawning in the Mediterranean, where temperature is high and food availability is low.

  20. Kudoa hypoepicardialis n. sp. (Myxozoa: Kudoidae) and associated lesions from the heart of seven perciform fishes in the northern Gulf of Mexico.

    PubMed

    Blaylock, Reginald B; Bullard, Stephen A; Whipps, Christopher M

    2004-06-01

    Kudoa hypoepicardialis n. sp. infects the space between the epicardium and the compact myocardium and, in intense infections, the pericardial chamber of man-of-war fish (Nomeus gronovii) (Nomeidae) (the type host), blue runner (Caranx crysos) (Carangidae), Warsaw grouper (Epinephelus nigritus) (Serranidae), Atlantic tripletail (Lobotes surinamensis) (Lobotidae), northern red snapper (Lutjanus campechanus) (Lutjanidae), black drum (Pogonias cromis) (Sciaenidae), and bluefish (Pomatomus saltatrix) (Pomatomidae) in the northern Gulf of Mexico. This is the first report of a Kudoa sp. from the heart of a fish in the Gulf of Mexico, and of these hosts, only the bluefish was previously identified as a host for a species of Kudoa. Spores of the new species varied slightly in size among these hosts but were regarded as conspecific based on their nearly identical (99.9%) small-subunit (SSU) ribosomal DNA (rDNA) sequence. The new species differs both from the 4 nominal species of Kudoa reported from fishes in the Gulf of Mexico and from K. pericardialis, an allopatric species that infects the pericardial cavity, by the combination of having a large spore, a small polar capsule, and a polar filament with a single coil. The new species is morphologically and genetically most similar to K. shiomitsui, an allopatric species that infects the heart and pericardial cavity, but is distinguished from it based on a 4.2% difference in the SSU rDNA sequence. Heart lesions primarily were restricted to the vicinity of plasmodia and included a layer of fibrinous inflammation characterized by lymphocytes, macrophages, and granulomas as well as epithelioid encapsulations around plasmodia. Heavily infected hosts had melanin-like deposits and adipose cells beneath the epicardium. and the epicardium was discontinuous and apparently breached by plasmodia in some regions. Cardiac muscle, gill, liver, spleen, intestine, and kidney were normal. PMID:15270103

  1. High Levels of Genetic Connectivity among Populations of Yellowtail Snapper, Ocyurus chrysurus (LutjanidaePerciformes), in the Western South Atlantic Revealed through Multilocus Analysis

    PubMed Central

    da Silva, Raimundo; Veneza, Ivana; Sampaio, Iracilda; Araripe, Juliana; Schneider, Horacio; Gomes, Grazielle

    2015-01-01

    In the present study, five loci (mitochondrial and nuclear) were sequenced to determine the genetic diversity, population structure, and demographic history of populations of the yellowtail snapper, Ocyurus chrysurus, found along the coast of the western South Atlantic. O. chrysurus is a lutjanid species that is commonly associated with coral reefs and exhibits an ample geographic distribution, and it can therefore be considered a good model for the investigation of phylogeographic patterns and genetic connectivity in marine environments. The results reflected a marked congruence between the mitochondrial and nuclear markers as well as intense gene flow among the analyzed populations, which represent a single genetic stock along the entire coast of Brazil between the states of Pará and Espírito Santo. Our data also showed high levels of genetic diversity in the species (mainly mtDNA), as well a major historic population expansion, which most likely coincided with the sea level oscillations at the end of the Pleistocene. In addition, this species is intensively exploited by commercial fisheries, and data on the genetic structure of its populations will be essential for the development of effective conservation and management plans. PMID:25769032

  2. Carbon isotopes in otolith amino acids identify residency of juvenile snapper (Family: Lutjanidae) in coastal nurseries

    NASA Astrophysics Data System (ADS)

    McMahon, K. W.; Berumen, M. L.; Mateo, I.; Elsdon, T. S.; Thorrold, S. R.

    2011-12-01

    This study explored the potential for otolith geochemistry in snapper (Family: Lutjanidae) to identify residency in juvenile nursery habitats with distinctive carbon isotope values. Conventional bulk otolith and muscle stable isotope analyses (SIA) and essential amino acid (AA) SIA were conducted on snapper collected from seagrass beds, mangroves, and coral reefs in the Red Sea, Caribbean Sea, and Pacific coast of Panama. While bulk stable isotope values in otoliths showed regional differences, they failed to distinguish nursery residence on local scales. Essential AA δ13C values in otoliths, on the other hand, varied as a function of habitat type and provided a better tracer of residence in different juvenile nursery habitats than conventional bulk otolith SIA alone. A strong linear relationship was found between paired otolith and muscle essential AA δ13C values regardless of species, geographic region, or habitat type, indicating that otolith AAs recorded the same dietary information as muscle AAs. Juvenile snapper in the Red Sea sheltered in mangroves but fed in seagrass beds, while snapper from the Caribbean Sea and Pacific coast of Panama showed greater reliance on mangrove-derived carbon. Furthermore, compound-specific SIA revealed that microbially recycled detrital carbon, not water-column-based new phytoplankton carbon, was the primary carbon source supporting snapper production on coastal reefs of the Red Sea. This study presented robust tracers of juvenile nursery residence that will be crucial for reconstructing ontogenetic migration patterns of fishes among coastal wetlands and coral reefs. This information is key to determining the importance of nursery habitats to coral reef fish populations and will provide valuable scientific support for the design of networked marine-protected areas.

  3. Growth stanzas in an Epinephelidae-Lutjanidae complex: considerations to length-weight relationships.

    PubMed

    Renán, Ximena; Trejo-Martínez, Jorge; Caballero-Arango, Doralice; Brulé, Thierry

    2015-03-01

    Growth stanzas or abrupt changes in growth rates are present throughout the life span of fish. Identifying growth stanzas will help to adequately described growth taking into account that fishes are indeterminate growers. In this study, we used length-weight (L-W) relationships to analyze the growth stanzas in the Grouper-Snapper complex of Southern Gulf of Mexico. For this, the type of sexuality, sex and different sexual maturity phase were considered in the analyses of three species of gonochoric Snappers (Lutjanidae) and six species of protogynous hermaphrodite Groupers (Epinephelidae). Welch ANOVA tests were carried out to deter- mine the existence of differences in length and weight between juveniles and adults per sex. According to the observed differences, L-W relationship parameters (a and b), standard error (SE b) and coefficients of determination (R2) were calculated for all species separately by sex and sexual maturity phase. Snappers' juvenile-females b-value ranged from 2.44-2.77, juvenile-males from 2.16-2.94, adult-females from 2.63-2.80 and adult-males from 2.63-2.98. Groupers' b-value ranged for juvenile-females 2.66-3.20, adult-females from 2.73-3.31 and for adult-males 2.93-3.29. For each relationship b-value was 1-tested (-Student) to explore differences from the allometric coefficient (b=3), which indicated changes in body form. Hypothesis test, for regression slopes (b) between Snappers' juvenile-females vs. adult-females and juvenile-males vs. adult-males and Groupers' juvenile-females vs. adult-females and adult-females vs. adult-males, indicated different growth stanzas related to gonadal development for Snappers, and to gonadal development and sex change in Groupers. The identification of growth stanzas is crucial to avoid an overestimation or misleading growth rate which is used in fisheries management to establish some target reference points, such as maximum sustainable yield or yield-per-recruit. PMID:26299123

  4. Use of riverine through reef habitat systems by dog snapper ( Lutjanus jocu ) in eastern Brazil

    NASA Astrophysics Data System (ADS)

    Moura, Rodrigo L.; Francini-Filho, Ronaldo B.; Chaves, Eduardo M.; Minte-Vera, Carolina V.; Lindeman, Kenyon C.

    2011-11-01

    The early life history of Western Atlantic snappers from the Southern hemisphere is largely unknown. Habitat use of different life stages (i.e. size categories) of the dog snapper ( Lutjanus jocu) was examined across the largest South Atlantic reef-estuarine complex (Abrolhos Shelf, Brazil, 16-19° S). Visual surveys were conducted in different habitats across the shelf (estuary, inner-shelf reefs and mid-shelf reefs). Lutjanus jocu showed higher densities on inner-shelf habitats, with a clear increase in fish size across the shelf. Individuals <7 cm were associated with both the estuary (mangrove and rocky habitats) and inner-shelf reefs (particularly shallow fore-reefs and tide pools). Individuals ranging 10-30 cm were broadly distributed, but consistently more abundant on inner-shelf reefs. Individuals between 30 and 40 cm were more common on mid-shelf reefs, while individuals >40 cm were recorded only on mid-shelf reefs. Literature data indicate that individuals ranging 70-80 cm are common on deep offshore reefs. This pattern suggests that the dog snapper performs ontogenetic cross-shelf migrations. Protecting portions of the different habitats used by the dog snapper during its post-settlement life cycle is highlighted as an important conservation and management measure.

  5. Chromosomal complements of some Atlantic Blennioidei and Gobioidei species (Perciformes)

    PubMed Central

    Galvão, Tatiana Barbosa; Bertollo, Luiz Antonio Carlos; Molina, Wagner Franco

    2011-01-01

    Abstract A remarkable degree of chromosomal conservatism (2n=48, FN=48) has been identified in several families of Perciformes. However, some families exhibit greater karyotypic diversity, although there is still scant information on the Atlantic species. In addition to a review of karyotypic data available for representatives of the suborders Blennioidei and Gobioidei, we have performed chromosomal analyses on Atlantic species of the families Blenniidae, Ophioblennius trinitatis Miranda-Ribeiro, 1919 (2n=46; FN=64) and Scartella cristata (Linnaeus, 1758)(2n=48; FN=50), Labrisomidae, Labrisomus nuchipinnis (Quoy & Gaimard, 1824)(2n=48; FN=50) and Gobiidae, Bathygobius soporator (Valenciennes, 1837)(2n=48; FN=56). Besides variations in chromosome number and karyotype formulas, Ag-NOR sites, albeit unique, were located in different positions and/or chromosome pairs for the species analyzed. On the other hand, the heterochromatic pattern was more conservative, distributed predominantly in the centromeric/pericentromeric regions of the four species. Data already available for Gobiidae, Blenniidae and Labrisomidae show greater intra- and interspecific karyotypic diversification when compared to other groups of Perciformes, where higher uniformity is found for various chromosome characteristics. Evolutionary dynamism displayed by these two families is likely associated with population fractionation resulting from unique biological characteristics, such as lower mobility and/or specific environmental requirements. PMID:24260634

  6. Complete mitochondrial genome of Parachromis managuensis (Perciformes: Cichlidae).

    PubMed

    Liu, Lihui; He, Jinzhao; Li, Ningqiu; Fu, Xiaozhe; Lin, Qiang; Shi, Cunbin; Lv, Yejian; Zhang, Zhixin

    2016-07-01

    The complete mitochondrial genome of Parachromis managuensis (Perciformes: Cichlidae) is sequenced in this study. The genome sequence was 16 526 bp in length, with the base composition of 28.1% A, 25.5% T, 15.4% G, 31.0% C. The gene order and genes are the same as found in other previously reported cichlid fish, including 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 1 D-loop region. Except for ND6 gene and eight tRNA genes, all other mitochondrial genes were encoded on the heavy strand. Parachromis managuensis was closely related to Amphilophus citrinellus and Petenia splendid, based on its complete mitochondrial genome sequences. This complete mitogenome data provide the basis for taxonomic and conservation research of Parachromis managuensis. PMID:26153742

  7. Glugea jazanensis sp. nov. infecting Lutjanus bohar in the Red Sea: ultrastructure and phylogeny.

    PubMed

    Abdel-Baki, Abdel-Azeem S; Tamihi, Ahmad F; Al-Qahtani, Hussain A; Al-Quraishy, Saleh; Mansour, Lamjed

    2015-10-27

    During a survey of the microsporean fauna of the two-spot red snapper Lutjanus bohar Forsskål, 1775, from the Red Sea off Jizan (Saudi Arabia), a species of Glugea Thélohan, 1891 was found that did not conform to any known species. The species is characterized by the presence of spherical xenomas (ca. 2-5 mm in diameter) in the host body cavity. Examination of the lifecycle stages and mature spores using light and transmission electron microscopy also revealed morphological characteristics typical of species of the genus Glugea. Spores were elongated-ovoid with a posterior vacuole surrounded by the polar filament coils. Mature spores were 4.5 (4.0-4.8) µm long and 2.5 (2.0-2.5) µm wide. The polar filament was isofilar with 28 to 30 coils, although in most cases 29 coils, organized in 3 rows. Phylogenetic study based on the partial sequence of the small subunit (SSU) rRNA gene clustered the new microsporidia within the clade grouping species of the genus Glugea. The comprehensive analysis of the parasite's ultrastructural characteristics, together with molecular data for the SSU rDNA gene, suggests that this parasite is a new species of the genus Glugea, for which the name Glugea jazanensis sp. nov. is proposed. PMID:26503772

  8. Age and growth of mangrove red snapper Lutjanus argentimaculatus at its cool-water-range limits.

    PubMed

    Piddocke, T P; Butler, G L; Butcher, P A; Stewart, J; Bucher, D J; Christidis, L

    2015-05-01

    This study investigates the age and growth of Lutjanus argentimaculatus at its southern (cooler) range limits in eastern Australia. Specimens were collected from New South Wales and southern Queensland between November 2011 and December 2013. Fork lengths (LF ) ranged from 190 to 1019 mm, and ages ranged from 2+ to 57+ years. Growth was described by the von Bertalanffy growth function with coefficients L∞ = 874·92 mm, K = 0·087 year(-1) and t0 = -2·76 years. Estimates of the instantaneous natural mortality rate (M) ranged from 0·072 to 0·25. The LF (mm) and mass (W; g) relationship was represented by the equation: W=2·647×10-5LF2·92. The maximum age of 57+ years is the oldest reported for any lutjanid and comparisons with tropical studies suggest that the age-based demography of L. argentimaculatus follows a latitudinal gradient. High maximum ages and low natural mortality rates indicate considerable vulnerability to overexploitation at the species' cool-water-range limits. These results demonstrate the need to identify underlying processes driving latitudinal gradients in fish demography. PMID:25943148

  9. The complete mitochondrial genome of the Pundamilia nyererei (Perciformes, Cichlidae).

    PubMed

    Chen, Lingyun; Song, Xiaolei; Chen, Xi; Dang, Xiao; Wang, Wenjing

    2016-09-01

    Pundamilia nyererei (Perciformes, Cichlidae) is a member of Cichlid fishes that lives in the Great Lakes of East Africa. Fishes of the Cichlidae family can adapt spectacular trophic radiations and provide good potential examples of vertebrate adaptive radiations. Here, we firstly assembled the complete mitochondrial genome (mitogenome) of Pundamilia nyererei. The mitgenome was 16 761 bp in length, including 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 1 putative control region. Most of these protein-coding genes started with a traditional ATG codon except for COX1, which initiated with an infrequent start codon GTG instead, and terminated with the mitochondrial stop codon (TAA/AGG/AGA) or a single T base. The mitogenome structural organization is identical to other Cichlid fish. The overall GC content is 45.25%, which is lower than the AT content. According to these new determined mitogenome sequences and 10 other species under the same family or order, we have constructed the species phylogenetic tree to verify the accuracy of newly assembled mitogenome sequences. We accept that by taking the advantage of full mitogenome, we can address taxonomic issue and study the related evolutionary events. Our current data are going to provide important resources for the research of Cichlid fishes mitochondrial evolution and energy metabolism. PMID:26260178

  10. Sensory, Microbiological and Chemical Changes in Vacuum-Packaged Blue Spotted Emperor (Lethrinus sp), Saddletail Snapper (Lutjanus malabaricus), Crimson Snapper (Lutjanus erythropterus), Barramundi (Lates calcarifer) and Atlantic Salmon (Salmo salar) Fillets Stored at 4°C.

    PubMed

    Fuentes-Amaya, Luisa Fernanda; Munyard, Steve; Fernandez-Piquer, Judith; Howieson, Janet

    2016-05-01

    Quality assessment of finfish fillets during storage is important to be able to predict the shelf life of the fresh product during distribution. Microbial, chemical (pH, TMA, and TVB-N), and sensory (Quality index assessment QIA, Torry scheme) changes in vacuum-packaged blue-spotted emperor (Lethrinus sp), saddletail (Lutjanus malabaricus), crimson snapper (Lutjanus erythropterus), barramundi (Lates calcarifer), and Atlantic salmon (Salmo salar) fillets stored at 4°C were evaluated for 5 days. Microbiological study included evaluation of TVC (total viable counts), total psychrotrophic organisms, and H2S-producing bacteria. Numbers increased during storage time and reached an average of 8.5, 8.5, and 9.2 log10 cfu/g, respectively, for the five different fish species. These levels were above accepted microbiological limits for fish fillets. Although the sensory analyses showed a decrease in quality, none of the finfish fillets were considered unacceptable at the end of the storage trial. Chemically, there was a slight pH increase, but trimethylamine (TMA) levels remained low. However, total volatile basic nitrogen (TVB-N) levels increased over time, reaching levels above 35 mg/100 g for blue spotted emperor, saddletail snapper, and crimson snapper by the end of the storage period. Results show that the deterioration of finfish fillet quality is a complex event of biochemical, sensory, and microbial factors, and multiple analyses may be required to define acceptability. PMID:27247777

  11. Spatial variation in otolith chemistry of Lutjanus apodus at Turneffe Atoll, Belize

    NASA Astrophysics Data System (ADS)

    Chittaro, P. M.; Usseglio, P.; Fryer, B. J.; Sale, P. F.

    2006-05-01

    Lutjanus apodus (Schoolmaster) were collected from several mangroves and coral reefs at Turneffe Atoll, Belize, in order to investigate whether elemental concentrations from the otolith edge could be used as a means to identify the habitat (mangrove or coral reef) and site (9 mangrove sites and 6 reef sites) from which they were collected. Results of a two factor nested MANOVA (sites nested within habitat) indicated significant differences in elemental concentrations between habitats (i.e., mangrove versus reef) as well as among sites. When separate Linear Discriminant Function Analyses (LDFA) were used to assess whether the spatial variability in otolith chemistry was sufficient to differentiate individuals to their respective habitats or sites, the results indicated that fish were classified (jackknife procedure) with a moderate to poor degree of accuracy (i.e., on average, 67% and 40% of the individuals were correctly classified to the habitat and site from which they were collected, respectively). Using a partial Mantel test we did not find a significant correlation between the differences in otolith elemental concentrations between sites and the distance between sites, while controlling the effect of habitat type (mangrove or reef). This suggests that for mangrove and reef sites at Turneffe Atoll, Belize, the overlap in terms of L. apodus otolith elemental concentrations is too high for investigations of fish movement. Finally, by comparing previously published Haemulon flavolineatum otolith chemistry to that of L. apodus we assessed whether these species showed similar habitat and/or site specific patterns in their otolith chemistry. Although both species were collected from the same sites our results indicated little similarity in their elemental concentrations, thus suggesting that habitat and site elemental signatures are species specific.

  12. Broader pattern of tandem repeats in the mitochondrial control region of Perciformes

    NASA Astrophysics Data System (ADS)

    Cui, Zhaoxia; Liu, Yuan; Chu, Ka Hou

    2010-07-01

    Perciformes, the largest order of vertebrates with 20 suborders, is the most diverse fish order that dominates vertebrate ocean life. The complete mitochondrial control region (CR) of Trichiurus japonicus (Trichiuridae, Scombroidei) and Pampus sp. (Stromateidae, Stromateoidei) were amplified and sequenced. Together with data from GenBank, the tandem repeats in the mitochondrial CR from 48 species, which covered nine suborders of Perciformes, are reported in this study. The tandem repeats tend to be long in the suborder Percoidei and Stromateoidei. The identical repeats in 21 species of Cichlidae suggest a common origin and have existed before species divergence. Larimichthys crocea shows tandem repeats instead of the typical structure of the central conserved sequence blocks, which was first reported in Perciformes and vertebrates. This might have resulted from interruption of the polymerase activity during the H-strand synthesis. The four broader patterns presented here for the tandem repeats, including those in both the 5' and 3' ends, only in the either 5' or 3' end, and in the central conserved domain of the control region, will be useful for understanding the evolution of species.

  13. Diet shifts of Caribbean grunts (Haemulidae) and snappers (Lutjanidae) and the relation with nursery-to-coral reef migrations

    NASA Astrophysics Data System (ADS)

    Cocheret de la Morinière, E.; Pollux, B. J. A.; Nagelkerken, I.; van der Velde, G.

    2003-08-01

    The spatial size distribution of grunts and snappers have previously indicated the separation of juveniles in nursery habitats from the adults on the coral reef. This implies life cycle migrations from nursery habitats (such as seagrass beds and mangroves) to the coral reef. If diet shifts are related to such migrations, then the diets of these fish must change before or around the fish size at which such migrations take place. A wide size range of juveniles of two grunt species ( Haemulon sciurus and Haemulon flavolineatum) and of two snapper species ( Lutjanus apodus and Ocyurus chrysurus) were caught in seagrass beds and mangroves, and their gut contents identified and quantified. Regression analysis between fish size and dietary importance of small crustaceans showed a negative relationship in all four species. Positive relations were found for H. sciurus, L. apodus and O. chrysurus between fish length and the dietary importance of decapods, and for L. apodusand O. chrysurus between fish length and prey fish importance. Critical changes in the fish diets with fish size were examined by application of a Canonical Correspondence Analysis (CCA). The CCA yielded three clusters of size-classes of fishes with similar diets, and application of a Mantel test showed that each of these clusters had significantly different diets, and that each cluster diet was significantly specialised. The size at which a fish species 'switched' from one cluster to another was compared with size-at-maturity data and with the typical size at which these species migrate from the nursery habitats to the coral reef. H. sciurus and H. flavolineatum may be prompted to migrate from the nursery habitats to coral reef habitats because of dietary changes, or because of the development of the gonads. For L. apodus and O. chrysurus, a dietary changeover forms a more likely explanation for nursery-to-reef migrations than does sexual maturation because these species reach maturity at sizes much larger

  14. A new species of diplectanid (Monogenoidea) from Paranthias colonus (Perciformes, Serranidae) off Peru.

    PubMed

    Knoff, Marcelo; Cohen, Simone Chinicz; Cárdenas, Melissa Querido; Cárdenas-Callirgos, Jorge M; Gomes, Delir Corrêa

    2015-01-01

    Pseudorhabdosynochus jeanloui n. sp. (Monogenoidea, Diplectanidae) is described from specimens collected from the gills of the Pacific creolefish, Paranthias colonus (Perciformes, Serranidae) from a fish market in Chorrillos, Lima, Peru. The new species is differentiated from other members of the genus by the structure of its sclerotized vagina, which has two spherical chambers of similar diameter. This is the first Pseudorhabdosynochus species described from the Pacific coast of America, the third species of the genus reported from South America and the first described from a member of Paranthias. PMID:25754099

  15. A new species of diplectanid (Monogenoidea) from Paranthias colonus (Perciformes, Serranidae) off Peru

    PubMed Central

    Knoff, Marcelo; Cohen, Simone Chinicz; Cárdenas, Melissa Querido; Cárdenas-Callirgos, Jorge M.; Gomes, Delir Corrêa

    2015-01-01

    Pseudorhabdosynochus jeanloui n. sp. (Monogenoidea, Diplectanidae) is described from specimens collected from the gills of the Pacific creolefish, Paranthias colonus (Perciformes, Serranidae) from a fish market in Chorrillos, Lima, Peru. The new species is differentiated from other members of the genus by the structure of its sclerotized vagina, which has two spherical chambers of similar diameter. This is the first Pseudorhabdosynochus species described from the Pacific coast of America, the third species of the genus reported from South America and the first described from a member of Paranthias. PMID:25754099

  16. Complete mitochondrial genome of the endemic South Korean species Odontobutis interrupta (Perciformes, Odontobutidae).

    PubMed

    Jun, Jumin; Choi, Seong-Ho; Kum, Ji-Don

    2016-07-01

    The complete mitochondrial genome of Odontobutis interrupta (Perciformes, Odontobutidae), a species endemic to South Korea, is reported here for the first time. The O. interrupta mitogenome is 16 802 base pairs in total length and includes 13 PCGs, small and large rRNAs, a control region and 22 tRNAs. Nine genes are encoded on the light strand and 29 on the heavy strand. The O. interrupta mitochondrial genome has a conserved gene order compared to four other Odontobutis species and Micropercops swinhonis, a closely related species. The data will provide useful molecular information for phylogenetic studies concerning Odontobutidae and its related species. PMID:26122340

  17. Chromosomal differentiation and speciation in sister-species of Grammatidae (Perciformes) from the Western Atlantic

    NASA Astrophysics Data System (ADS)

    Molina, Wagner Franco; da Costa, Gideão Wagner Werneck Felix; de Bello Cioffi, Marcelo; Bertollo, Luiz Antonio Carlos

    2012-09-01

    In the tropical Atlantic, the ichthyofauna between the coast of Brazil and the Caribbean regions, divided by the Amazon barrier, is very similar presenting several geminate species, including Gramma brasiliensis, endemic in Brazil, and its Caribbean counterpart Gramma loreto. Morphological and molecular studies have helped establish evolutionary patterns that sister-species of these two marine habitats are subjected to. However, their chromosomal characteristics are only beginning to be better characterized. Accordingly, a comparative cytogenetic analysis was carried out in G. brasiliensis and G. loreto, seeking evidence of cytotaxonomic markers implicated in the karyotypic diversification of these species and likely associated with speciation events. Heterochromatic regions and their affinity to fluorochromes GC- or AT-specific were identified, as well as the distribution of ribosomal DNA sites in chromosomes, either by silver nitrate impregnation (Ag-NORs) or dual-color FISH mapping with 18S and 5S rDNA probes. While displaying the same diploid number, 2 n = 48 chromosomes, considered basal for Perciformes, the two species differed in karyotype structure, showing karyotypic formulas and species-specific heterochromatin pattern. The cytological characters found support the differentiating status of these species, possibly achieved under the conditions of allopatry due to the Amazon/Orinoco barrier, showing chromosomal peculiarities in Grammatidae species when compared to other groups of Perciformes.

  18. The complete mitochondrial genome sequence of Trichopodus leerii (Perciformes: Osphronemidae) and phylogenetic studies of Osphronemidae.

    PubMed

    Wang, Guang-Peng; Liu, Wen-Jie; Si, Gui-Cai; Hu, Guo-Wen

    2016-07-01

    Trichopodus leerii has been given many popular names in the ornament market, such as pearl gourami, lace gourami and mosaic gourami, which causes confusion in species identification. This species belongs in the family Osphronemidae of Perciformes. This species and its congeners are characterized by a brownish-silver body, covered in a pearl-like pattern. In this study, we first determined and described the complete mitogenome sequence of T. leerii, which is 16,472 bp in length. The overall base composition is 29.2%, 27.3%, 28.0% and 15.5% for A, C, T and G, respectively, with a slight bias in the AT content (57.2%). All protein-coding genes share the start codon ATG and most of them have TAA or TAG as the stop codon, except ND4 and ND6 use an incomplete stop codon T. Maximum likelihood tree and Bayesian analyses based on partitioned nucleotide sequences of 12 mitochondrial protein-coding genes were constructed, and both yielded identical topologies. These results are expected to provide useful molecular data for species identification and further phylogenetic studies of Osphronemidae and Perciformes. PMID:26024133

  19. Historical and contemporary evidence of a mutton snapper ( Lutjanus analis Cuvier, 1828) spawning aggregation fishery in decline

    NASA Astrophysics Data System (ADS)

    Graham, R. T.; Carcamo, R.; Rhodes, K. L.; Roberts, C. M.; Requena, N.

    2008-06-01

    Scientific information on reef fish spawning aggregation fisheries is sparse in light of numerous regional declines and extirpations from overexploitation. Fisher interviews of the small-scale commercial mutton snapper ( Lutjanus analis) spawning aggregation fishery at Gladden Spit, Belize, suggests a historic decadal decline. The reported trend is supported by analysis of inter-seasonal catch and effort and yield (2000 2002) that reveals a 59% decline in catch per unit effort (CPUE) and a 22% decrease in mean landings per boat. Declining population-level trends are also supported by a significant decrease in inter-annual median lengths of mutton snappers (2000 2006). These findings demonstrate the need for additional life history information that includes length-associated age and details on growth to provide clearer support of the effects on, and responses by, populations following fishing. In view of the historical changes to mutton snapper CPUE and landings at Gladden Spit and the fishery-associated declines in fish spawning aggregations observed globally, a precautionary approach to spawning aggregation management is warranted that provides full protection from fishing to enhance population persistence. The findings also highlight the need for substantially greater enforcement and long-term fisheries monitoring under a comprehensive regional management strategy.

  20. Expression of myostatin in the spotted rose snapper Lutjanus guttatus during larval and juvenile development under cultured conditions.

    PubMed

    Torres-Velarde, J; Ibarra-Castro, L; Rodríguez-Ibarra, E; Sifuentes-Romero, I; Hernández-Cornejo, R; García-Gasca, A

    2015-11-01

    In this study, the developmental expression pattern of myostatin (mstn) in the spotted rose snapper Lutjanus guttatus under culture conditions is presented. The full coding sequence of mstn from L. guttatus was isolated from muscle tissue, obtaining 1134 nucleotides which encode a peptide of 377 amino acids. The phylogenetic analysis indicated that this sequence corresponds to mstn-1. mstn expression was detected in embryonic stages, and maintained at low levels until 28 days post-hatch, when it showed a significant increase, coinciding with the onset of metamorphosis. After that, expression was fluctuating, coinciding probably with periods of rapid and slow muscle growth or individual growth rates. mstn expression was also analysed by body mass with higher levels detected in smaller animals, irrespective of age. mstn was also expressed in other tissues from L. guttatus, presenting higher levels in brain, eye and gill. In brain for instance, two variants of mstn were isolated, both coding sequences were identical to muscle, except that one of them contained a 75 nucleotide deletion in exon 1, maintaining the reading frame but deleting two conserved cysteine residues. Phylogenetic analysis indicated that this brain variant was also mstn-1. The function of this variant is not clear and needs further investigation. These results indicate that mstn-1 participates in different physiological processes other than muscle growth in fishes. PMID:26376729

  1. Characterization and expression analysis of B Cell receptor accessory molecule CD79 gene in humphead snapper ( Lutjanus sanguineus)

    NASA Astrophysics Data System (ADS)

    Huang, Yucong; Yan, Xiuying; Cai, Shuanghu; Cai, Jia; Jian, Jichang; Lu, Yishan; Tang, Jufen; Wu, Zaohe

    2016-04-01

    CD79, a key component of the B cell antigen receptor complex, is composed of CD79α(Igα) and CD79β(Igβ) encoded by mb-1 and B29 respectively, and plays an important role in B cell signaling. In this study, we isolated and characterized mb-1 and B29 from humphead snapper ( Lutjanus sanguineus). Their tissue distribution and expression profiles after stimulations in vitro and in vivo were also investigated. The humphead snapper mb-1 and B29 contain open reading frames of 684 bp and 606 bp, encoding 227 amino acids and 201 amino acids, respectively. Both CD79α and CD79β possess signal peptide, extracellular Ig domain, transmembrane region and immunoreceptor tyrosine kinase activation motif (ITAM). Mb-1 is highly expressed in lymphoid organs (thymus, posterior kidney and spleen) and mucosal-associated lymphoid tissues (gill and intestine), while B29 is mainly detected in posterior kidney, spleen, gill and skin. Furthermore, transcription of mb-1 and B29 in head kidney leucocytes was up-regulated following lipopolysaccharide (LPS), pokeweed mitogen (PWM), and polyinosinic-polycytidylic acid (PolyI:C) stimulation, respectively, and their expression level in anterior kidney and spleen was also increased after challenged with formalin-inactived Vibrio harveyi. These results indicated that humphead snapper CD79 molecule might play an important role in immune response to pathogen infection.

  2. Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens)

    PubMed Central

    Davis, William T.; Drymon, J. Marcus; Powers, Sean P.

    2015-01-01

    Understanding the complex nature of direct and indirect species interactions is a critical precursor to successful resource management. In the northern Gulf of Mexico fisheries ecosystem, red snapper (Lutjanus campechanus) and vermilion snapper (Rhomboplites aurorubens) are two commercially harvested species within a larger reef fish complex. These two species share similar habitats and diets; however, little is known about how these species partition habitat and dietary resources. In this study we examined the extent of spatial and dietary overlap between red snapper and vermilion snapper, and experimentally compared their feeding behavior. Field data from multiple gear types demonstrates that red snapper and vermilion snapper frequently cohabited reefs in the northern Gulf of Mexico, and Pianka’s niche overlap indices suggest significantly overlapping diets. Experimental manipulations show that red snapper are the dominant forager of the two species, as red snapper foraging alone ate more shrimp per fish than vermilion snapper in both the single species (p = 0.003) and mixed species (p = 0.02) treatments. In addition, red snapper ate significantly more shrimp per fish in the mixed species treatment than in the single species treatment (p = 0.04). Vermilion snapper shrimp consumption per fish did not differ significantly between mixed and single species treatments. Cumulatively, our results suggest that spatial and dietary overlap could lead to competition between red and vermilion snapper in the study area; however, conclusively determining the existence of such competition would require further research. PMID:26630481

  3. Hematological characteristics of the spotted rose snapper Lutjanus guttatus (Steindachner, 1869) healthy and naturally infected by dactylogyrid monogeneans.

    PubMed

    Del Rio-Zaragoza, O B; Fajer-Ávila, E J; Almazán-Rueda, P; Abdo de la Parra, M I

    2011-06-01

    The aim of the present study was to obtain a basic knowledge of the hematology in order to determine changes in blood parameters of the spotted rose snapper Lutjanus guttatus. The morphological features of blood cells were described according to the observations made by light microscopy of Wright-Giemsa-stained blood films. The reference intervals and the mean value were determined for each hematological parameter evaluated in healthy fish and data were compared to those of naturally infected, with dactylogyrid monogeneans fish. Infected fish showed a prevalence of 100% and a mean intensity of 246.6 parasites per fish. Mean values of HCT, WBC, thrombocytes percentage and eosinophils percentage were significantly higher (P<0.05) in the infected fish. In addition, lymphocytes percentage and total protein were significantly lower (P<0.05) in the infected fish compared to healthy fish. Only total WBC count, lymphocytes percentage and eosinophils percentage in infected fish were outside reference interval. The hematology of the spotted rose snapper of this study might serve as a basis for future studies and diagnosis. Changes observed in blood parameters in infected fish suggest that the immune system of L. guttatus was affected by the presence of the parasites. PMID:21466888

  4. Influence of β-glucan on innate immunity and resistance of Lutjanus guttatus to an experimental infection of dactylogyrid monogeneans.

    PubMed

    Del Rio-Zaragoza, O B; Fajer-Ávila, E J; Almazán-Rueda, P

    2011-09-01

    The present study investigated the effect of β-1,3/1,6-glucan on growth, haematology, innate immunity and resistance against dactylogyrids on the spotted rose snapper (Lutjanus guttatus). Fish were fed during 5 weeks with commercial diet (control group) and same diet supplemented with three levels of β-glucans (0·05%, 0·1% and 0·5%/kg feed). The results showed that at concentrations of 0·05% and 0·1%, fish growth was enhanced, and in weeks 2 and 4, an increase in cellular responses such as percentage of monocytes, neutrophils, respiratory burst activity and nitric oxide activity was observed. In diet with 0·5%β-glucans, changes were registered at the end of the experiment. At week 2, 0·05%β-glucans showed the best response to most of the analysed parameters. In a second trial, diet with 0·05%β-glucans was chosen to prove its effect on the resistance of infected fish with monogeneans. The results showed that fish reduce significantly the number of dactylogyrids, and parameters such as WBC, percentage of lymphocytes, neutrophils and eosinophils were increased. In addition, WBC and percentage of thrombocytes increased in the control (+). The β-glucans have the potential to be use in diet formulations of the spotted rose snapper and to limit the adverse effects of dactylogyrids. PMID:21711364

  5. Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens).

    PubMed

    Davis, William T; Drymon, J Marcus; Powers, Sean P

    2015-01-01

    Understanding the complex nature of direct and indirect species interactions is a critical precursor to successful resource management. In the northern Gulf of Mexico fisheries ecosystem, red snapper (Lutjanus campechanus) and vermilion snapper (Rhomboplites aurorubens) are two commercially harvested species within a larger reef fish complex. These two species share similar habitats and diets; however, little is known about how these species partition habitat and dietary resources. In this study we examined the extent of spatial and dietary overlap between red snapper and vermilion snapper, and experimentally compared their feeding behavior. Field data from multiple gear types demonstrates that red snapper and vermilion snapper frequently cohabited reefs in the northern Gulf of Mexico, and Pianka's niche overlap indices suggest significantly overlapping diets. Experimental manipulations show that red snapper are the dominant forager of the two species, as red snapper foraging alone ate more shrimp per fish than vermilion snapper in both the single species (p = 0.003) and mixed species (p = 0.02) treatments. In addition, red snapper ate significantly more shrimp per fish in the mixed species treatment than in the single species treatment (p = 0.04). Vermilion snapper shrimp consumption per fish did not differ significantly between mixed and single species treatments. Cumulatively, our results suggest that spatial and dietary overlap could lead to competition between red and vermilion snapper in the study area; however, conclusively determining the existence of such competition would require further research. PMID:26630481

  6. Morphological Characters and Transcriptome Profiles Associated with Black Skin and Red Skin in Crimson Snapper (Lutjanus erythropterus)

    PubMed Central

    Zhang, Yan-Ping; Wang, Zhong-Duo; Guo, Yu-Song; Liu, Li; Yu, Juan; Zhang, Shun; Liu, Shao-Jun; Liu, Chu-Wu

    2015-01-01

    In this study, morphology observation and illumina sequencing were performed on two different coloration skins of crimson snapper (Lutjanus erythropterus), the black zone and the red zone. Three types of chromatophores, melanophores, iridophores and xanthophores, were organized in the skins. The main differences between the two colorations were in the amount and distribution of the three chromatophores. After comparing the two transcriptomes, 9200 unigenes with significantly different expressions (ratio change ≥ 2 and q-value ≤ 0.05) were found, of which 5972 were up-regulated in black skin and 3228 were up-regulated in red skin. Through the function annotation, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of the differentially transcribed genes, we excavated a number of uncharacterized candidate pigment genes as well as found the conserved genes affecting pigmentation in crimson snapper. The patterns of expression of 14 pigment genes were confirmed by the Quantitative real-time PCR analysis between the two color skins. Overall, this study shows a global survey of the morphological characters and transcriptome analysis of the different coloration skins in crimson snapper, and provides valuable cellular and genetic information to uncover the mechanism of the formation of pigment patterns in snappers. PMID:26569232

  7. Anatomical and surface morphology of Hedruris lutjanenses sp. n. (Nematoda: Hedruridae) from the common marinewater fish Lutjanus synagris in Damietta, Egypt.

    PubMed

    Ramadan, M M; Awad, E R; Taha, R G

    2014-08-01

    The description and tegumental ultrastructure of nematode Hedruris lutjanenses sp. n. collected from marine Lane Snapper fish Lutjanus synagris Linnaeus, 1758 collected at Manzala Lake, Damietta, Egypt was studied by light and Scanning Electron Microscopy (SEM). The new species is mainly characterized by that the buccal capsule is surrounded by four pseudolapia; one small and three larger pseudolapia, each one bears a number of papillae arranged irregularly on its surface and the presence of one pair of precloacal papillae and nine pairs of postcloacal ones in males. PMID:25597145

  8. Population model for Amyloodinium ocellatum infecting the spotted seatrout Cynoscion nebulosus and the red snapper Lutjanus campechanus.

    PubMed

    Masson, Ignacio; Lotz, Jeffrey M; Blaylock, Reginald B

    2013-10-11

    The dinoflagellate Amyloodinium ocellatum, a major pathogen in warm water mariculture, has a trophont, a tomont and a dinospore life history stage. This paper presents a population model for A. ocellatum infecting spotted seatrout Cynoscion nebulosus and red snapper Lutjanus campechanus and evaluates the relative effect of each vital rate on the A. ocellatum population growth rate. The vital rates were estimated by incubating trophonts in vitro and tracking their development through the successive life history stages at 25°C and 33 ppt. The A. ocellatum population growth rate was 1.90 d-1 for spotted seatrout and 1.92 d-1 for red snapper. Highest elasticity values (0.24 and 0.23 in spotted seatrout and red snapper, respectively) corresponded to transitions from the dinospore to the trophont stage, the trophont stage to the tomont stage and the tomont stage back to the dinospore stage in both host species (self-loops not included). A 50% change in vital rates showed that the mean number of dinospores produced by a tomont had the largest effect on the A. ocellatum population growth rate (15%), followed by the dinospore infection rate (14%), the tomont sporulation rate (12%) and the dinospore mortality rate (10%) in both host species. A comparison of modeled and experimental vital rate threshold values revealed a 2.5- (spotted seatrout) or a 2.6-fold (red snapper) difference in the values for dinospore mortality, which is the smallest difference among all the modeled and experimental vital rates. Therefore, measures that increase dinospore mortality have a greater likelihood of influencing the outcome of an epidemic. PMID:24113247

  9. Humoral immune response and TLR9 gene expression in Pacific red snapper (Lutjanus peru) experimentally exposed to Aeromonas veronii.

    PubMed

    Reyes-Becerril, Martha; Angulo, Carlos; Ascencio, Felipe

    2015-02-01

    Aquaculture production of Pacific red snapper Lutjanus peru is growing rapidly in Mexico, especially in Gulf of California. As it is a relatively new aquaculture species there are few reports evaluating its immune response to pathogens. The Gram-negative bacteria Aeromonas veronii is a heterogeneous organism that causes the disease known as motile aeromonad septicemia, which is responsible for serious economic loss in seabream culture due to bacterial infections. For the purpose of this study, juvenile Pacific red snapper specimens were intraperitoneally injected with low doses of A. veronii (1 × 10(6) CFU ml(-1)). Changes in humoral immune parameters (total protein, myeloperoxidase, lisozyme and antiprotease activities and IgM levels), as well as superoxide dismutase and catalase activities, and TLR9 gene expression were evaluated 24 and 48 h after injection. Overall, the results showed an enhanced in humoral immune parameters and SOD and CAT activities in fish infected with A. veronii compared with control group at 24 or 48 h. By real time PCR assays, the basal mRNA transcripts of TLR9 showed that were highly expressed in intestine and leucocytes compared to skin, head kidney, liver and gill. Then, the mRNA expression levels of TLR9 in head kidney, skin, liver and intestine were analyzed in non-infected and experimentally infected fish 24 and 48 h after injection. A. veronii up-regulated the expression of TLR9 at 24 or 48 h of exposure in all samples analyzed except in liver. Interestingly, intestine produced the greatest increase in transcript levels upon exposure (48 h) to A. veronii. Taken together, our results suggest that low doses of A. veronii infection inducing humoral immune system and TLR9 immune gene in Pacific red snapper that can be useful in the health control of this species. PMID:25462554

  10. Regional variation in mercury and stable isotopes of red snapper (Lutjanus campechanus) in the northern Gulf of Mexico, USA.

    PubMed

    Zapp Sluis, Michelle; Boswell, Kevin M; Chumchal, Matthew M; Wells, R J David; Soulen, Brianne; Cowan, James H

    2013-02-01

    The presence of total mercury (Hg) in fish tissue and the potential associated health risks has become a global concern in marine ecosystems. Few studies have examined basin-scale variation in Hg accumulation in marine ecosystems, and determining if Hg concentrations in fish tissue vary across marine ecosystems is a key monitoring question. The present study evaluated Hg concentrations in red snapper (Lutjanus campechanus) tissue across three regions of the northern Gulf of Mexico (Alabama, Louisiana, and Texas, USA) and between two habitat types (oil and gas platforms and nonplatforms) within each region. Nitrogen (δ(15)N), carbon (δ(13)C), and sulfur (δ(34)S) stable isotopes were used to investigate ecological differences that may affect Hg concentrations among regions and between habitats. Mercury concentrations in red snapper tissue were positively correlated with fish total length. Regional differences in Hg concentrations were significant, with fish collected from Alabama having the highest concentrations and fish collected from Louisiana having the lowest. No significant difference existed in Hg concentrations between habitats, suggesting that association with platforms may not be a significant factor contributing to red snapper Hg concentrations. While δ(15)N did not differ significantly among the three regions, Texas red snapper were more enriched in δ(34)S and depleted in δ(13)C compared with Alabama and Louisiana red snapper. Although the majority of red snapper collected in the present study had Hg concentrations below safe consumption guidelines, regional differences suggest that spatially explicit monitoring programs may be important for basin-wide assessments. PMID:23180665

  11. Metal contents in the tissues of Lutjanus fulviflamma (Smith 1949) and Epinephelus tauvina (Forskal 1775) collected from the Arabian Gulf

    SciTech Connect

    Ahmad, S.; Al-Ghais, S.M.

    1996-12-01

    The role heavy metals (the non-degradable and commutative chemicals) play as pollutants is widely recognized. In the sea, accumulation of pollutants may cause the toxicity to the aquatic organism and subsequently transferred to man through the food chain. Among the major sources of metal contamination are industrial activities and mining. Natural processes such as volcanic eruptions, erosion and wind are also important. At many places, industrial and agricultural discharges were found primary source of metal poisoning of fish e.g. Poland, Canada. Highway or motorboat traffic has also been reported as a major contributor of the problem. Exposure to heavy metals through air, water and/or the food chain is known to induce a wide variety of toxic effects in humans and animals. Some of these heavy metals are considered as essential elements for normal physiological functions of the human as well as for the most of animals micronutrients but the higher levels may be toxic or harmful. Extensive studies have been carried out in many parts of the world to determine toxicity and bio-accumulation of these metals in fish and other marine flora and fauna. However, there is a gap in our knowledge of the kind and extent of marine pollution by heavy metals around the coast of the United Arab Emirates (UAE) and the resultant contamination of the aquatic habitat. In continuation of our interest in marine environment, this study was designed to investigate and to compare the concentrations of cadmium, copper, manganese, nickel, lead and zinc in the skin, muscle and liver, and mercury in the muscle tissues only of Lutjanus fulviflamma and Epinephelus tauvina. These species have been selected as these are among the highly commercial fish species found in the trap fishery of United Arab Emirates. 25 refs., 3 figs., 5 tabs.

  12. Characterization and expression of MHC class II alpha and II beta genes in mangrove red snapper (Lutjanus argentimaculatus).

    PubMed

    Wang, Tianyan; Tan, Shangjin; Cai, Zhonghua

    2015-12-01

    The major histocompatibility complex (MHC) class II plays a key role in adaptive immunity by presenting foreign peptides to CD4(+) T cells and by triggering the adaptive immune response. While the structure and function of MHC class II have been well characterized in mammalian, limited research has been done on fishes. In this study, we characterized the gene structure and expression of MHC class II α (Lunar-DAA) and II β (Lunar-DAB) of mangrove red snapper (Lutjanus argentimaculatus). Both genes shared, respectively, a high similarity and typical features with other vertebrate MHC class II α and II β. The phylogenetic analysis of the deduced peptides revealed that both Lunar-DAA and Lunar-DAB were located in the teleost subclass. Western blotting analyses indicated that both MHC class II α and II β were expressed ubiquitously in immune-related cells, tissues and organs, and that MHC class II α and II β chains existed mainly as heterodimers. While it was highly expressed in gills, thymus, head kidney (HK), spleen, head kidney macrophage and spleen leucocytes, MHC class II β chain was expressed with a low abundance in skin, intestine, stomach and heart. The highest expression of MHC class II β in thymus confirmed the conclusion that thymus is one of the primary lymphoid organs in fishes. The detection of MHC class II αβ dimers in HK macrophages and spleen leucocytes indicated that HK macrophages and spleen leucocytes play a critical role in the adaptive immunity in fishes. All these results provide valuable information for understanding the structure of MHC class II α and II β and their function in immune responses. PMID:26454477

  13. Chromosome Mapping of Repetitive Sequences in Rachycentron canadum (Perciformes: Rachycentridae): Implications for Karyotypic Evolution and Perspectives for Biotechnological Uses

    PubMed Central

    Jacobina, Uedson Pereira; Cioffi, Marcelo de Bello; Souza, Luiz Gustavo Rodrigues; Calado, Leonardo Luiz; Tavares, Manoel; Manzella, João; Bertollo, Luiz Antonio Carlos; Molina, Wagner Franco

    2011-01-01

    The cobia, Rachycentron canadum, a species of marine fish, has been increasingly used in aquaculture worldwide. It is the only member of the family Rachycentridae (Perciformes) showing wide geographic distribution and phylogenetic patterns still not fully understood. In this study, the species was cytogenetically analyzed by different methodologies, including Ag-NOR and chromomycin A3 (CMA3)/DAPI staining, C-banding, early replication banding (RGB), and in situ fluorescent hybridization with probes for 18S and 5S ribosomal genes and for telomeric sequences (TTAGGG)n. The results obtained allow a detailed chromosomal characterization of the Atlantic population. The chromosome diversification found in the karyotype of the cobia is apparently related to pericentric inversions, the main mechanism associated to the karyotypic evolution of Perciformes. The differential heterochromatin replication patterns found were in part associated to functional genes. Despite maintaining conservative chromosomal characteristics in relation to the basal pattern established for Perciformes, some chromosome pairs in the analyzed population exhibit markers that may be important for cytotaxonomic, population, and biodiversity studies as well as for monitoring the species in question. PMID:21541243

  14. Complete mitochondrial genome of the African pompano Alectis ciliaris (Perciformes: Carangidae).

    PubMed

    Li, Yufang; Chen, Zuozhi; Zhang, Peng; Liang, Peiwen; Chen, Sen; Guo, Yihui; Li, Min

    2016-05-01

    The African pompano Alectis ciliaris (Perciformes: Carangidae) is an economic fish species distributed throughout the tropical oceans and seas of the world. In this study, we assembled the complete mitochondrial genome of A. ciliaris from contiguous, overlapping segments amplified by polymerase chain reactions. The complete mitogenome sequence was 16,570 bp in length, consisting of 37 typical animal mitochondrial genes and 1 control region, same with the typical vertebrate mitochondrial gene arrangement. There were 10 regions of gene overlaps totaling 30 bp and 12 intergenic spacer regions totaling 67 bp. The overall base composition of the heavy strand was 28.32% for A, 26.77% for T, 16.16% for G, 28.75% for C with a slight AT bias of 55.09%. PMID:25317642

  15. Complete mitogenome of the foxface rabbitfish Siganus vulpinus (Perciformes, Siganidae): indication of potential interbreeding in rabbitfishes.

    PubMed

    Yan, Shuai; Wang, Ming; Yang, Tingbao

    2016-05-01

    In the present study, the complete mitochondrial genome of the foxface rabbitfish Siganus vulpinus (Perciformes, Siganidae) is determined. The entire sequence is 16,505 bp in length, including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 1 control region. The genome organization is similar to those found in other rabbitfishes. Apart from ND6 and 8 tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Overall base compositions of mitogenome are 29.3% of A, 29.3% of C, 25.7% of T, and 15.7% of G, showing an obvious anti-G bias which is commonly found in fishes. The high similarity of mitochondrial genome between S. vulpinus and S. unimaculatus indicate that natural interbreeding might exist in breeding season. PMID:25329262

  16. The complete mitochondrial genome of longfin yellowtail S. rivoliana (Perciformes: Carangidae).

    PubMed

    Chen, Zuozhi; Li, Yufang; Liang, Peiwen; Li, Min

    2016-09-01

    The complete mitochondrial genome of the longfin yellowtail Seriola rivoliana (Perciformes: Carangidae) was obtained in this study. The entire genome was sequenced via primer walking after long PCRs. The size of the genome was 16,530 bp in length, containing the usual 2 rRNA genes, 13 protein-coding genes, 22 tRNA genes, and one non-coding control region. The genome composition and gene order were similar to most vertebrates. Most mitochondrial genes (excepted for ND6 and eight tRNA genes) were encoded on the heavy strand. The complete mitogenome of S. rivoliana could provide a basic data for studies on species identification, molecular systematics and conservation genetics. PMID:25714153

  17. Two gonad-infecting species of Philometra (Nematoda: Philometridae) from marine fishes off the northern coast of Australia

    PubMed Central

    Moravec, František; Barton, Diane P.

    2015-01-01

    Two different gonad-infecting species of Philometra Costa, 1845 were collected from the ovary of marine perciform fishes, the blackspotted croaker Protonibea diacanthus (Sciaenidae) and the John’s snapper Lutjanus johnii (Lutjanidae), from off the northern coast of Australia. Nematodes (males and females) from P. diacanthus represent a new taxon, Philometra protonibeae n. sp., which is mainly characterized by the body length of the males (3.37–3. 90 mm), broad, equally long spicules (length 126–141 μm) and the shape and structure of the gubernaculum with a dorsally lamellate distal tip. The nematodes (only females) from L. johnii may represent an undescribed species, but, because of the absence of conspecific males, they could not be specifically identified. Philometra protonibeae is the fifth nominal gonad-infecting species of this genus recorded from marine fishes in Australian waters and the seventh species of these parasites described from fishes of the family Sciaenidae. PMID:25654578

  18. Two new gonad-infecting species of Philometra Costa, 1845 (Nematoda: Philometridae) from marine fishes off the northern coast of Australia.

    PubMed

    Moravec, František; Diggles, Ben K

    2014-09-01

    Based on light and electron microscopical studies, two new gonad-infecting species of Philometra Costa, 1845 (Nematoda: Philometridae) are described from the ovary of marine perciform fishes off the northern coast of Australia (near Darwin): Philometra carangis n. sp. from the bluespotted trevally Caranx bucculentus Alleyne & Macleay (Carangidae) and P. carponotati n. sp. from the Spanish flag snapper Lutjanus carponotatus (Richardson) (Lutjanidae). Philometra carangis is mainly characterised by the length of the spicules (153-189 µm), the presence of a distinct dorsal protuberance consisting of two dorsolateral lamellar parts separated from each other by a smooth median field, a V-shaped mound on the male caudal extremity, a pair of large post-cloacal papillae and the body length of the males (3.22-4.15 mm). Philometra carponotati is distinguished from other congeneric species parasitising lutjanids by the length of the spicules and gubernaculum (225-252 and 99-117 µm, respectively), the absence of a dorsal protuberance on the distal lamellar part of the gubernaculum, the presence of a U-shaped mound on the male caudal extremity, a pair of large post-cloacal papillae and the body length of the male (3.74-4.31 mm). Besides the recently established Philometra zabidii Moravec & Diggles, 2014 (based on a single female), these two newly described nematodes are the only nominal gonad-infecting species of Philometra known to parasitise marine fishes in Australian waters. PMID:25079814

  19. Philometrid nematodes infecting fishes from the Everglades National Park, Florida, U.S.A.

    PubMed

    Moravec, Frantisek; Bakenhaster, Micah

    2010-09-01

    The following three species of the Philometridae (Nematoda: Dracunculoidea) are described from marine perciform fishes of the Everglades National Park (northern Gulf of Mexico), Florida, U.S.A.: Philometra brevispicula sp. n. (male and females) from the subcutaneous tissue of mouth of the gray snapper Lutjanus griseus (Linnaeus) (Lutjanidae), Philometroides grandipapillatus sp. n. (only females) from pectoral fin muscle of the crevalle jack Caranx hippos (Linnaeus) (Carangidae), and Caranginema americanum Moravec, Montoya-Mendoza et Salgado-Maldonado, 2008 (females) from the subcutaneous fascia of trunk muscle in crevalle jack C. hippos. Philometra brevispicula is mainly characterized by small cephalic papillae of the external circle, the absence of oesophageal teeth and the presence of small caudal projections in gravid female, markedly short spicules (45 microm) in male, and by its location in the host. Philometroides grandipapillatus differs from congeners mainly in the shape of the cephalic region (narrow, conspicuously protruding), large cephalic papillae of the external circle and the absence of caudal projections in female, and by the site of infection in the host. Caranginema americanum is for the first time recorded from the northern Gulf of Mexico. PMID:20941913

  20. Spatial and temporal variability in the otolith chemistry of the Brazilian snapper Lutjanus alexandrei from estuarine and coastal environments.

    PubMed

    Aschenbrenner, A; Ferreira, B P; Rooker, J R

    2016-07-01

    Otolith chemistry of juvenile and adult individuals of the Brazilian snapper Lutjanus alexandrei was measured to assess the utility of natural markers for investigating individual movements. Individuals were collected over a 3-year period (2010-2012) along the north-eastern coast of Brazil from both estuarine (juvenile to sub-adult stages) and coastal (sub-adult to adult stages) areas. Six elements ((7) Li, (24) Mg, (55) Mn, (59) Co, (88) Sr and (137) Ba) were measured in sectioned otoliths of L. alexandrei using laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS). Edge composition analysis indicated that element:Ca ratios in the otoliths of juvenile and sub-adult L. alexandrei from estuaries were not significantly different among the three consecutive years (2010, 2011 and 2012), suggesting that physicochemical conditions within the nursery area investigated were temporally stable. Similarly, apart from two elements (Ba and Co), element:Ca ratios for larger L. alexandrei inhabiting coastal waters were also similar. In contrast, otolith chemistry of similar sized L. alexandrei from estuarine and coastal areas was significantly different (based on recently accreted material). Otolith Mn:Ca and Ba:Ca were both significantly higher for L. alexandrei collected in estuaries compared to fish from adjacent coastal reefs, while the opposite trend was observed for Sr:Ca. Given the pronounced differences in otolith chemistry between estuarine and coastal areas, element:Ca transects were constructed from the core to margin of the otoliths for adults (age 7+ years) collected on reefs to determine the timing of movement (ontogenetic migration) from estuarine to coastal areas. Based on observed patterns of decline for both Mn:Ca and Ba:Ca, it appears that L. alexandrei begin the move to more coastal habitats (i.e. lower element:Ca ratios) after age 2 years. The patterns observed for this species highlight the importance of conserving connectivity between

  1. Effects of dietary protein level on growth and utilization of protein and energy by juvenile mangrove red snapper (Lutjanus argentimaculatus)

    NASA Astrophysics Data System (ADS)

    Ghulam, Abbas; Khalid, Jamil; Rukhsana, Akhtar; Lin, Hong

    2005-01-01

    A feeding trial was conducted in a recirculating water system to investigate the effects of dietary protein levels on growth, feed utilization, hepatosomatic index and liver lipid deposition of juvenile red snapper, Lutjanus argentimaculatus (average initial wet weight 8.0 ± 0.39 g and total length 3.14 ± 0.3 cm). In the experiment, six fishmeal-based diets were formulated to contain various protein levels (20% to 45% in 5% increments), with dietary energy ranging from 2210.7kJ lOOg to 2250.2kJlOOg dry matter. The protein to energy ratios of diets ranged from 8.58 mg protein kJ-1 to 20.03 mg protein kJ-1. Diets were fed for 90d to triplicate groups of fish stocked in 0.128m3 seawater tanks, 25 individuals each. The daily ration of 2% wet body weight was offered to the fish thrice a day. The fish at the end of the study had more than ten-fold (77.0g) increase in weight compared to the initial (8.0g). Fish fed diets of 40% and 45% protein produced significantly (P<0.05) higher weight gain of 77.2g and 76.5g, and specific growth rate (SGR) of 2.65% and 2.62% than those of 67.0 g and 68.3g, and 2.49% and 2.51% of the other diets. The broken-line regression of SGR against dietary protein level yielded an optimum dietary protein requirement of 42.6% (Y=-1.6295 + 0.1114 X 2,P<0.05). Survival remained 100% among groups. Feed conversion ratio decreased from 0.45 for fish fed 20% dietary protein to 0.35 for fish fed 45% dietary protein. Nitrogen intake increased with an increase in dietary protein, which in turn resulted in an increase in nitrogen gain of fish whole body. Fish fed 40% and 45% protein diets showed higher (P<0.05) nitrogen gain (0.27g and 0.26g) than those (0.23g and 025g) fed all other diets. Gross energy intake (GEI) in fish fed 45% protein was lower (600.67kJ) than that (607.97 kJ) of 40% protein diet, though the differences were not statistically significant (P>0.05); GEI ranging from 677.31 kJ to 663.20 kJ at remaining four diets (20% to 35% protein

  2. Cloning and expression analysis of recombination activating genes (RAG1/2) in red snapper (Lutjanus sanguineus).

    PubMed

    Zhang, X L; Lu, Y S; Jian, J C; Wu, Z H

    2012-04-01

    Recombination activating genes (RAG1 and RAG2), involved in the V(D)J recombination of immunoglobulin and T-cell receptor genes play a crucial role in the adaptive immune response in vertebrates. The expression of these genes was required for the proper development and maturity of lymphocytes so that they can be used as useful markers to evaluate the development of lymphoid organ. In this paper, the cDNA of RAG1 and RAG2 in red snapper, Lutjanus sanguineus were cloned by homological cloning and rapid amplification of cDNA ends (RACE) methods. Results showed the full length of RAG1 cDNA was 3944 bp, containing a 5' untranslated region (UTR) of 200 bp, a 3'-UTR of 561 bp and an open reading frame of 3183 bp encoding 1060 amino acids. Three important structural motifs, a RING/U-box domain, a RING/FYVE/PHD-type domain and a RAG Nonamer-binding domain were detected in the deduced amino acid sequence of RAG1 by InterProScan analysis. The full length of RAG2 cDNA was 2200 bp, consisting of a 141 bp 5'-UTR, a 457 bp 3'-UTR and an open reading frame of 1602 bp encoding 533 amino acids. Two important structural motifs, a Galactose oxidase/kelch, beta-propeller domain and a kelch-type beta-propeller domain were detected in the deduced amino acid sequence of RAG2 by InterProScan analysis. BLAST analysis revealed that the RAG1 and RAG2 in red snapper shared a high homology with other known RAG1 and RAG2 genes, while the greatest degree of identity was observed with Hippoglossus hippoglossus RAG1 at 82% and Takifugu rubripes RAG2 at 87%, respectively. The differential expressions of RAG1 and RAG2 in various tissues of red snapper were analyzed by fluorescent quantitative real-time PCR. The overall expression pattern of the two genes was quite similar. In healthy red snappers, the RAGs transcripts were mainly detected in thymus, following head kidney, spleen, intestine, liver and brain. After vaccinated with inactivated Vibrio alginolyticus 48 h later, the RAGs m

  3. Organization and characterization of the mitochondrial genome of the Razorbelly scad Alepes kleinii (Perciformes: Carangidae).

    PubMed

    Li, Min; Zou, Keshu

    2016-01-01

    The complete mitochondrial genome sequence of Alepes kleinii (Perciformes: Carangidae) was determined in this study. The entire sequence was 16,571 bp in length which contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions (the control region and the light strand replication origin). Gene organization and gene order were similar to that observed in most other vertebrates. Overall base compositions of the sequence were 28.0% of A, 28.5% of C, 27.0% of T, and 16.5% of G, showing an obvious anti-G bias commonly observed in teleosts. Apart from the ND6 and eight tRNA genes, all other genes were encoded on the heavy strand. Three types of initiation codons were detected in the open reading frames of the protein-coding genes, including codon ATA which was rarely detected in Carangidae species. The complete mitogenome sequence data of A. kleinii could provide useful information for taxonomic and phylogenetics studies. PMID:24438294

  4. Discovery of toll-like receptor 13 exists in the teleost fish: Miiuy croaker (Perciformes, Sciaenidae).

    PubMed

    Wang, Yanjin; Bi, Xueyi; Chu, Qing; Xu, Tianjun

    2016-08-01

    Toll-like receptors (TLRs) play an indispensable role in the immune response for pathogen recognition and triggering not only innate immunity but also adaptive immunity. Here we report the TLR13 homologue, one member of TLRs, in Perciformes (especially Sciaenidae). And we used the miiuy croaker as represented species for further functional experiments. Former study reported the TLR13 only expressed in murine, and we are the first to report the teleost TLR13 (mmiTLR13). MmiTLR13 expressed highly in immune defense related tissues, such as the liver, spleen, and kidney, and Vibrio anguillarum or poly(I:C) infection showed the immune response of mmiTLR13. Further luciferase reporter assays showed the ability for activation of ISRE luciferase reporter, but it failed to active NF-κB. And further gene silence by short hairpin RNA (shRNA) confirmed the results. Immunofluorescence of mmiTLR13 presents the cytoplasmic distribution in Hela cell. In addition, the Toll/interleukin 1 receptor (TIR) domain of mammal TLR5 exhibits high identity with TLR13, which indicated the high homology between TLR5 and TLR13. These findings will lay the fundamental cornerstone for further research of teleost TLR13 and expand the horizon for better understand the teleost TLRs system. PMID:26952767

  5. Molecular cytogenetic analyses of Epinephelus bruneus and Epinephelus moara (Perciformes, Epinephelidae).

    PubMed

    Guo, Minglan; Wang, Shifeng; Su, Yongquan; Zhou, Yongcan; Liu, Min; Wang, Jun

    2014-01-01

    Genus Epinephelus (Perciformes, Epinephelidae), commonly known as groupers, are usually difficult in species identification for the lack and/or change of morphological specialization. In this study, molecular cytogenetic analyses were firstly performed to identify the closely related species Epinephelus bruneus and E. moara in this genus. The species-specific differences of both fish species showed in karyotype, chromosomal distribution of nucleolar organizer regions (NORs) and localization of 18S rDNA. The heterochromatin (interstitial C-bands) and distribution pattern of telomere (TTAGGG) n in E. bruneus revealed the chromosomal rearrangements and different karyotypic evolutionary characteristics compared to those in E. moara. The cytogenetic data suggested that the lineages of E. bruneus and E. moara were recently derived within the genus Epinephelus, and E. moara exhibited more plesiomorphic features than E. bruneus. All results confirmed that E. moara, which has long been considered a synonym of E. bruneus, is a distinct species in the family Epinephelidae. In addition, molecular cytogenetic analyses are useful in species differentiation and phylogenetic reconstruction in groupers. PMID:24949234

  6. Molecular systematics of Selene (Perciformes: Carangidae) based on cytochrome B sequences.

    PubMed

    Reed, D L; deGravelle, M J; Carpenter, K E

    2001-12-01

    The marine fishes of the genus Selene are morphologically unique, although little is known about how these species are related to other members of the family Carangidae (Perciformes). In addition, questions remain about the potential validity of two putative species and how species groups with unique body forms within Selene are related. We used DNA sequences of the mitochondrial cytochrome b gene to reconstruct the phylogeny of the seven species of Selene along with five additional species of carangids. Maximum-likelihood and maximum-parsimony analyses were used to examine the sequence data and both phylogenetic methods were compared. Maximum-likelihood produced a monophyletic Selene, whereas parsimony analyses did not. Both maximum-likelihood and maximum-parsimony produced similar support for species groups within Selene. Maximum-likelihood produced two monophyletic subgroups within the genus Selene, the "long-finned" and "short-finned" Selene. Maximum-parsimony produced the same monophyletic "long-finned" group but a paraphyletic "short-finned" group. Both analyses confirm that S. brownii and S. setapinnis are distinct species, expunging the question of conspecificity. The phylogenetic placement of the most basal taxon within Selene, S. orstedii, was problematic and differed among analyses. More data are needed to resolve with confidence its correct phylogenetic placement and, thus, the monophyly of the genus Selene. PMID:11741387

  7. An annotated list of fish parasites (Isopoda, Copepoda, Monogenea, Digenea, Cestoda, Nematoda) collected from Snappers and Bream (Lutjanidae, Nemipteridae, Caesionidae) in New Caledonia confirms high parasite biodiversity on coral reef fish

    PubMed Central

    2012-01-01

    Background Coral reefs are areas of maximum biodiversity, but the parasites of coral reef fishes, and especially their species richness, are not well known. Over an 8-year period, parasites were collected from 24 species of Lutjanidae, Nemipteridae and Caesionidae off New Caledonia, South Pacific. Results Host-parasite and parasite-host lists are provided, with a total of 207 host-parasite combinations and 58 parasite species identified at the species level, with 27 new host records. Results are presented for isopods, copepods, monogeneans, digeneans, cestodes and nematodes. When results are restricted to well-sampled reef fish species (sample size > 30), the number of host-parasite combinations is 20–25 per fish species, and the number of parasites identified at the species level is 9–13 per fish species. Lutjanids include reef-associated fish and deeper sea fish from the outer slopes of the coral reef: fish from both milieus were compared. Surprisingly, parasite biodiversity was higher in deeper sea fish than in reef fish (host-parasite combinations: 12.50 vs 10.13, number of species per fish 3.75 vs 3.00); however, we identified four biases which diminish the validity of this comparison. Finally, these results and previously published results allow us to propose a generalization of parasite biodiversity for four major families of reef-associated fishes (Lutjanidae, Nemipteridae, Serranidae and Lethrinidae): well-sampled fish have a mean of 20 host-parasite combinations per fish species, and the number of parasites identified at the species level is 10 per fish species. Conclusions Since all precautions have been taken to minimize taxon numbers, it is safe to affirm than the number of fish parasites is at least ten times the number of fish species in coral reefs, for species of similar size or larger than the species in the four families studied; this is a major improvement to our estimate of biodiversity in coral reefs. Our results suggest that

  8. Neobenedenia melleni Parasite of Red Snapper, Lutjanus erythropterus, with Regression Statistical Analysis between Fish Length, Temperature, and Parasitic Intensity in Infected Fish, Cultured at Jerejak Island, Penang, Malaysia

    PubMed Central

    Ravi, Rajiv

    2016-01-01

    The fish parasites collected from Lutjanus erythropterus fish species showed a correlation with parasitic intensity, fish size, and temperature, and statistical model summary was produced using SPSS version 20, statistical software. Statistical model summary concluded that among the variables which significantly predict the prevalence of Neobenedenia melleni parasites are fish length and water temperature, both significant at 1% and 5%. Furthermore, the increase in one unit of fish length, holding other variables constant, increases the prevalence of parasite by approximately 1 (0.7≈1) unit. Also, increasing the temperature from 32°C to 33°C will positively increase the number of parasites by approximately 0.32 units, holding other variables constant. The model can be summarized as estimated number of Neobenedenia melleni parasites = 8.2 + 0.7 ⁎ (fish length) + 0.32 ⁎ (water temperature). Next, this study has also shown the DNA sequence and parasitic morphology of Neobenedenia melleni. Nucleotide sequence for 18s ribosomal gene RNA in this study showed 99% similarity with N. melleni EU707804.1 from GenBank. Finally, all the sequence of Neobenedenia melleni in this study was deposited in GenBank with accession numbers of KU843501, KU843502, KU843503, and KU843504. PMID:27190634

  9. Development of Formaldehyde Biosensor for Determination of Formalin in Fish Samples; Malabar Red Snapper (Lutjanus malabaricus) and Longtail Tuna (Thunnus tonggol).

    PubMed

    Noor Aini, Bohari; Siddiquee, Shafiquzzaman; Ampon, Kamaruzaman

    2016-01-01

    Electrochemical biosensors are widely recognized in biosensing devices due to the fact that gives a direct, reliable, and reproducible measurement within a short period. During bio-interaction process and the generation of electrons, it produces electrochemical signals which can be measured using an electrochemical detector. A formaldehyde biosensor was successfully developed by depositing an ionic liquid (IL) (e.g., 1-ethyl-3-methylimidazolium trifluoromethanesulfonate ([EMIM][Otf])), gold nanoparticles (AuNPs), and chitosan (CHIT), onto a glassy carbon electrode (GCE). The developed formaldehyde biosensor was analyzed for sensitivity, reproducibility, storage stability, and detection limits. Methylene blue was used as a redox indicator for increasing the electron transfer in the electrochemical cell. The developed biosensor measured the NADH electron from the NAD⁺ reduction at a potential of 0.4 V. Under optimal conditions, the differential pulse voltammetry (DPV) method detected a wider linear range of formaldehyde concentrations from 0.01 to 10 ppm within 5 s, with a detection limit of 0.1 ppm. The proposed method was successfully detected with the presence of formalin in fish samples, Lutjanus malabaricus and Thunnus Tonggol. The proposed method is a simple, rapid, and highly accurate, compared to the existing technique. PMID:27376338

  10. A new species of Gobius (Perciformes: Gobiidae) from the Mediterranean Sea and the redescription of Gobius bucchichi.

    PubMed

    Kovačić, M; Šanda, R

    2016-03-01

    A new species of the gobiid genus Gobius (Gobiidae, Perciformes), Gobius incognitus sp. nov. is described from the Mediterranean Sea, and its most morphologically similar species Gobius bucchichi is redescribed. The new species is distinguished from its congeners by: scales in lateral series 51-59; predorsal scales 25-35; opercle scaled in adults with 10-16 scales present; pectoral fin with ray count 18-20 and free tips on upper rays well developed and on the first ray longer than two thirds of the entire ray length; pelvic disc complete and with well-developed anterior membrane without lateral lobes; anterior oculoscapular canal with pore α at rear of orbit; oculoscapular row x(1) not extending forwards to pore β; suborbital row d discontinuous with large gap below suborbital rows 3 and 4; eye diameter 1·08-1·32 in snout length; by pigment rows on cheek and pigmentation on pectoral-fin base. PMID:26822387

  11. Spatial and temporal distribution patterns of the silver mojarra Eucinostomus argenteus (Perciformes: Gerreidae) in a tropical semi-enclosed bay.

    PubMed

    Corrêa, B; Vianna, M

    2016-07-01

    This study determined the spatial and temporal distributions of the silver mojarra Eucinostomus argenteus (Perciformes: Gerreidae), one of the most abundant teleost species in bays and estuaries. Sampling was conducted from July 2005 to June 2007. The species was captured on all sampling dates and at six of the seven sampling stations. Approximately 80% of the individuals were below the size of first sexual maturity (12·0 cm total length, LT ). Although the spatial distribution of juveniles and adults differed throughout the study period, the environmental variables measured explained only a small part of their distribution. The recruitment period occurred during the first part of each year. Despite the high pollution levels in Guanabara Bay, this coastal system plays an important role as a nursery ground and for the growth of E. argenteus. PMID:26686645

  12. Nutrition and feeding research in the spotted rose snapper (Lutjanus guttatus) and bullseye puffer (Sphoeroides annulatus), new species for marine aquaculture.

    PubMed

    García-Ortega, Armando

    2009-03-01

    The spotted rose snapper (Lutjanus guttatus) and bullseye puffer (Sphoeroides annulatus) are fish species from the tropical Eastern Pacific for which controlled production of larvae and juveniles has been accomplished in recent years. Diverse topics relating to their biology and aquaculture production are currently under study, in particular the nutrition and feeding aspects required to formulate practical feeds and rearing protocols. Improvements in larval growth and survival are possible by feeding live food organisms with natural or enhanced essential fatty acids content and highly digestible artificial microdiets. The ontogeny of the digestive tract and the expression and activity of digestive enzymes have been described for S. annulatus larvae. The effect of various protein and lipid levels on growth and feed utilization has been studied in juvenile and on-growing fish. Both species have carnivorous feeding habits and require high levels of protein in their diets, from 40% to 45% (dry weight) in spotted rose snapper and above 50% in bullseye puffer, with the younger stages requiring the highest protein levels. Encouraging results have been obtained in feeding experiments with different sources of dietary protein from animal and plant origin to evaluate their suitability as feed ingredients in practical diets. Optimization of fish culture practices through feeding management has also been investigated. Trials with various fish densities and feeding frequencies in intensive culture systems are providing information to improve feed utilization and growth in on-growing fish. Further research is underway to evaluate factors in broodstock nutrition which have an impact on egg and larval quality, and into the use of various commercially available oil sources in on-growing diets. In this paper, the results on nutrition and feeding research with both species are reviewed and research needs to support their commercial production in the region are discussed. PMID

  13. Effects of temperature and diet on length-weight relationship and condition factor of the juvenile Malabar blood snapper (Lutjanus malabaricus Bloch & Schneider, 1801).

    PubMed

    Mazumder, Sabuj Kanti; Das, Simon Kumar; Bakar, Yosni; Ghaffar, Mazlan Abd

    2016-08-01

    In this study we aimed to analyze the effects of water temperature and diet on the length-weight relationship and condition of juvenile Malabar blood snapper Lutjanus malabaricus over a 30-d experimental period. The experiment was conducted in the laboratory using a flow-through-sea-water system. The fish were subjected to four different temperatures (22, 26, 30, and 34 °C) and two diets (commercial pellet and natural shrimp). Fish were fed twice daily. L. malabaricus exhibited negative allometric growth (b<3) at the beginning of the experiment (Day 0) at all temperatures and both diets except for 22 °C fed with shrimp, which showed isometric growth (b=3). Conversely, at the end of the experiment (Day 30) fish showed isometric growth (b=3) at 30 °C fed with the pellet diet, indicating that the shape of the fish did not change with increasing weight and length, and a positive allometric growth (b>3) at 30 °C fed with shrimp diet, which indicated that fish weight increases faster than their length. The rest of the temperatures represented negative allometric growth (b<3) on both diet, meaning that fish became lighter with increasing size. The condition factors in the initial and final measurements were greater than 1, indicating the state of health of the fish, except for those fed on a pellet diet at 34 °C. However, the best condition was obtained at 30 °C on both diets. Nevertheless, diets did not have a significant effect on growth and condition of juvenile L. malabaricus. The data obtained from this study suggested culturing L. malabaricus at 30 °C and feeding on the pellet or shrimp diet, which will optimize the overall production and condition of this commercially important fish species. PMID:27487803

  14. Effects of temperature and diet on length-weight relationship and condition factor of the juvenile Malabar blood snapper (Lutjanus malabaricus Bloch & Schneider, 1801)*

    PubMed Central

    Mazumder, Sabuj Kanti; Das, Simon Kumar; Bakar, Yosni; Ghaffar, Mazlan Abd.

    2016-01-01

    In this study we aimed to analyze the effects of water temperature and diet on the length-weight relationship and condition of juvenile Malabar blood snapper Lutjanus malabaricus over a 30-d experimental period. The experiment was conducted in the laboratory using a flow-through-sea-water system. The fish were subjected to four different temperatures (22, 26, 30, and 34 °C) and two diets (commercial pellet and natural shrimp). Fish were fed twice daily. L. malabaricus exhibited negative allometric growth (b<3) at the beginning of the experiment (Day 0) at all temperatures and both diets except for 22 °C fed with shrimp, which showed isometric growth (b=3). Conversely, at the end of the experiment (Day 30) fish showed isometric growth (b=3) at 30 °C fed with the pellet diet, indicating that the shape of the fish did not change with increasing weight and length, and a positive allometric growth (b>3) at 30 °C fed with shrimp diet, which indicated that fish weight increases faster than their length. The rest of the temperatures represented negative allometric growth (b<3) on both diet, meaning that fish became lighter with increasing size. The condition factors in the initial and final measurements were greater than 1, indicating the state of health of the fish, except for those fed on a pellet diet at 34 °C. However, the best condition was obtained at 30 °C on both diets. Nevertheless, diets did not have a significant effect on growth and condition of juvenile L. malabaricus. The data obtained from this study suggested culturing L. malabaricus at 30 °C and feeding on the pellet or shrimp diet, which will optimize the overall production and condition of this commercially important fish species. PMID:27487803

  15. Severe glomerular disease in juvenile grey snapper Lutjanus griseus L. in the Gulf of Mexico caused by the myxozoan Sphaerospora motemarini n. sp.

    PubMed Central

    Holzer, Astrid S.; Pecková, Hanka; Patra, Sneha; Brennan, Nathan P.; Yanes-Roca, Carlos; Main, Kevan L.

    2013-01-01

    In the eastern Gulf of Mexico, off the coast of Florida, grey snapper, Lutjanus griseus was found to be infected with the myxozoan parasite Sphaerospora motemarini n. sp., with high prevalence (83%) and intensity of infection occuring in age-0 fish, and with parasite levels decreasing with age (age-1 snapper 40%; age-2 snapper 0%). The morphological, molecular and phylogenetic characterisation of the myxozoan showed that it is a member of the typically marine, polysporoplasmid Sphaerospora spp. which form a subclade within the Sphaerospora sensu stricto clade of myxozoans, which is characterised by large expansion segments in their SSU rDNA sequences. Presporogonic stages of S. motemarini n. sp. were detected in the blood, using PCR. Pseudoplasmodia and spores were found to develop in the renal corpuscles of the host, causing their massive expansion. Macroscopic and histopathological changes were observed in age-0 fish and show that S. motemarini n. sp. causes severe glomerulonephritis in L. griseus leading to a compromised host condition, which makes it more susceptible to stress (catch-and-release, predators, water quality) and can result in mortalities. These results are discussed in relation to the exploitation of grey snapper populations by commercial and recreational fisheries and with the observed increased mortalities with temperature along the coast of Florida. In the future, we would like to determine prevalence and intensity of infection with S. motemarini n. sp. in juvenile L. griseus in different areas of the Gulf of Mexico in order to be able to estimate the temperature dependence of S. motemarini n. sp. proliferation and to be able to predict its distribution and severity during climatic changes in the Gulf. PMID:24533325

  16. Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish flag snapper (Lutjanus carponotatus) on the Great Barrier Reef.

    PubMed

    Cooke, Steven J; Messmer, Vanessa; Tobin, Andrew J; Pratchett, Morgan S; Clark, Timothy D

    2014-01-01

    Fisheries and marine park management strategies for large predatory reef fish can mean that a large proportion of captured fish are released. Despite being released, these fish may experience high mortality while they traverse the water column to locate suitable refuge to avoid predators, all the while recovering from the stress of capture. The predatory reef fish Spanish flag snapper (Lutjanus carponotatus) is frequently released because of a minimum-size or bag limit or by fishers targeting more desirable species. Using L. carponotatus as a model, we tested whether simulated fishing stress (exercise and air exposure) resulted in impairments in reflexes (e.g., response to stimuli) and the ability to identify and use refuge in a laboratory arena and whether any impairments were associated with blood physiology or metabolic recovery. Control fish were consistently responsive to reflex tests and rapidly located and entered refugia in the arena within seconds. Conversely, treatment fish (exhausted and air exposed) were unresponsive to stimuli, took longer to search for refugia, and were more apprehensive to enter the refuge once it was located. Consequently, treatment fish took more than 70 times longer than control fish to enter the coral refuge (26.12 vs. 0.36 min, respectively). The finding that fish exposed to stress were hesitant to use refugia suggests that there was likely cognitive, visual, and/or physiological impairment. Blood lactate, glucose, and hematocrit measures were perturbed at 15 and 30 min after the stressor, relative to controls. However, measurements of oxygen consumption rate revealed that about 50% of metabolic recovery occurred within 30 min after the stressor, coinciding with apparent cognitive/visual/physiological recovery. Recovering the treatment fish in aerated, flow-through chambers for 30 min before introduction to the behavioral arena restored reflexes, and "recovered" fish behaved more similarly to controls. Therefore, we suggest that

  17. Growth, Age Validation, Mortality, and other Population Characteristics of the Red Emperor Snapper, Lutjanus sebae (Cuvier, 1828), off the Kimberley Coast of North-Western Australia

    NASA Astrophysics Data System (ADS)

    Newman, S. J.; Dunk, I. J.

    2002-07-01

    Red emperor, Lutjanus sebae, were examined from commercial catches in the Northern Demersal Scalefish Fishery (NDSF) of north-western Australia from 1997 to 1999. Specimens ranged from 183 to 728 mm fork length (FL); males had a mean FL of 509 mm, and were significantly larger than females that had a mean FL of 451 mm. Ages were estimated from thin sections of sagittal otoliths. Marginal increment analysis of sagittal otoliths showed a single annual minimum during September and October and indicated that one annulus is formed each year. Male L. sebae (n=977; 211-728 mm FL) ranged from age 2 to 30 years and females (n=1384; 183-584 mm FL) ranged from age 1 to 34 years. Sagittal otolith weight and height were significantly correlated with age for each sex. There was significant differential growth between sexes. The relationship of observed fork length at age was described by the von Bertalanffy growth equation for males, Lt=627·8 {1-exp [-0·151 (t+0·595)]} and females, Lt=482·6 {1-exp [-0·271 (t-0·065)]}. The slow growth, long life span and large size and age at maturity of L. sebae indicate that this species has a low production potential and hence spatial area closures are vulnerable to over-exploitation. The instantaneous rate of natural mortality (M) ranged from 0·104 to 0·122. The optimum rate of fishing mortality was estimated to be 0·052-0·061. The instantaneous rate of total mortality (Z) estimated from catch at age data for fully recruited ages, was 0·374 in 1997/98 and 0·242 in 1998/99. Hence, the NDSF population of L. sebae is exploited above optimum levels. Given their low production potential, populations of L. sebae in north-western Australia and elsewhere in the Indo-Pacific region require prudent management. Furthermore, fishery managers need to consider as part of any harvest strategy for these fish to preserve significant levels of the spawning stock.

  18. Rapid infection and proliferation of dactylogyrid monogeneans on gills of spotted rose snapper (Lutjanus guttatus) after transfer to a sea-cage.

    PubMed

    Soler-Jiménez, Lilia C; Morales-Serna, Francisco N; Fajer-Ávila, Emma J

    2015-06-15

    Finfish mariculture is typically threatened by parasite and disease outbreaks. Therefore, it is important to identify parasite species of potential risk for this activity. Snappers are valuable food fish worldwide. In the Eastern Pacific, spotted rose snapper (Lutjanus guttatus [Steindachner, 1869]) is a firm candidate for sea-cage aquaculture. In the current study, the parasitism of caged L. guttatus by dactylogyrids was evaluated for the first time during a complete farming period. Twenty five thousand juvenile fish produced at the Research Center for Food and Development (CIAD, Mazatlan Unit) were reared in a sentinel sea-cage from February to November 2012 in Mazatlan Bay, Mexico. A fish sample (n=15) was obtained every month. Dactylogyrids from the left second gill arch were identified and quantified. A total of 18,704 dactylogyrids distributed in three species, Euryhaliotrema perezponcei García-Vargas, Fajer-Ávila and Lamothe-Argumedo, 2008, E. mehen (Soler-Jiménez, García-Gasca and Fajer-Ávila, 2012), and Haliotrematoides guttati García-Vargas, Fajer-Ávila and Lamothe-Argumedo, 2008 (Monogenea: Dactylogyridae) was found, which were able to infect caged L. guttatus since the first month of the farming period. Prevalence of these parasite species was 100% all the time, except for initial low values for E. mehen and H. guttati. The mean intensity of infection of each dactylogyrid species varied significantly between sampling months. Euryhaliotrema perezponcei was the most abundant parasite, reaching the highest mean intensity in May, June and July (154.3, 296.9 and 176.6 parasites/host, respectively). No clear seasonality of infection was observed; however, the influence of the water temperature on the observed infection levels is discussed. There was no mortality, change on behavior or pathological signs. However, given the rapid infection and proliferation of dactylogyrids, particularly E. perezponcei on L. guttaus reared in a sentinel sea

  19. Aporocotyle michaudi n. sp. (Digenea: Aporocotylidae) from the emerald rock cod, Trematomus bernacchii (Teleostei: Perciformes) in Antarctica.

    PubMed

    Santoro, Mario; Cipriani, Paolo; Pankov, Plamen; Lawton, Scott P

    2015-10-01

    Aporocotyle michaudi n. sp. is described from the gill blood vessels of the emerald rock cod Trematomus bernacchii in the Ross Sea, Antarctica. It is distinguished from all other species of Aporocotyle by its body tegument showing single conical spines, spinous buccal capsule, and genital atrium positioned medially; all congeners described to date are characterized by clusters of tegumental spines, unspined buccal capsule and genital atrium located in the lateral part of the body. Aporocotyle michaudi n. sp. clearly differs from A. notothenia (the only other species of Aporocotyle found in a perciform fish) in its shape and arrangement of tegumental spines, buccal capsule features, location of genital atrium, body size, ratio of esophagus/body length, anterior caeca/posterior caeca ratio, number of testes, cirrus sac and ovary size and shape, and host. The new species is easily distinguished from A. argentinensis (the species that most closely resembles A. michaudi) by the shape and arrangement of tegumental spines, buccal capsule features, genital atrium location, left anterior caecum longer than right, esophagus/body length ratio, number of testes, cirrus sac size and shape, host and molecular analyses. Phylogenetic analyses of partial 28S rDNA genetic data showed that sequences representing the new species form a distinct clade with all other sequences for species of Aporocotyle and appear basal within the genus. Aporocotyle michaudi n. sp. represents the only species of genus described in Antarctica. PMID:25979611

  20. Complete mitochondrial genome of the giant croaker Nibea japonica (Perciformes, Sciaenidae) and phylogenetic analysis of the Sciaenidae.

    PubMed

    Hu, Zehui; Chai, Xuejun; Wang, Yuebin; Zhu, Yunhai; Zhu, Dongfa

    2016-09-01

    The giant croaker Nibea japonica (Perciformes, Sciaenidae) is an important economic fish distributing in the East China Sea, South China Sea, and Japan southern coast. In this study, the complete mitochondrial genome of N. japonica was firstly determined. It is 16 496 bp-length and consists of 22 tRNA genes, 13 protein-coding genes, two rRNA genes, and a control region. Except for eight tRNA and ND6 genes, all other mitochondrial genes are encoded on the heavy strand. Phylogenetic analysis revealed that N. japonica, A. amoyensis, and other seven fish first clustered into the Argyrosominae clade. It is consistent with the taxonomic status. Then, the Argyrosominae, Pseudosciaeninae, and Sciaeniae formed the sister group, while the Johniinae became a separate clade, which is inconsistent with the previous phenotypic report. It is suggested that the researches of single gene and taxionomic might lose some significant evolutionary characters. This study will contribute to phyogenetic analysis of the Sciaenidae and the natural resources conservation. PMID:26369837

  1. Trends on the Karyotype Acrocentrization Within Carangidae (Perciformes): A New Phylogenetic Evidence About a Traditional Marine Paradigm.

    PubMed

    Jacobina, Uedson Pereira; Martinez, Pablo Ariel; Torres, Rodrigo Augusto; Souza, Gustavo

    2016-02-01

    Carangidae is a morphologically diverse family of marine fish, characterized by stable karyotypes, predominantly with 2n = 48, composed of acrocentric chromosomes (A). This stability is shared with other families of the order Perciformes, which resulted in the hypothesis that 48A is a plesiomorphic karyotype of the group. We tested this hypothesis in the Carangidae family using comparative phylogenetic methods, investigating the evolution of karyotype characters (including chromosome number, morphology, and number of chromosome arms per karyotype [fundamental number, FN]). Our analyses revealed that 2n = 48 is most likely the ancestral chromosome number for the family. However, an extremely variable number of FNs, always above 48, was observed in basal clades within the family and sister groups. On the other hand, the reduced FN = 48 was consistently observed only in the most derived clades, indicating a tendency for acrocentrization. The number of acrocentric chromosomes apparently was accompanied by a trend of reduction in the genome size (1C-value), suggesting that these changes might be correlated. Our data contradict the marine fish hypothesis that the 2n = 48 acrocentric karyotype is plesiomorphic, at least for Carangidae, and reveal the importance for the correct interpretation of karyotype in a temporal and phylogenetic context. PMID:26716977

  2. [Analysis of diet composition and overlap in four species of the genus Diplectrum (Perciformes: Serranidae) in the Mexican Central Pacific].

    PubMed

    Aguilar Palomino, Bernabé; González Sansón, Gaspar

    2010-12-01

    Analysis of diet composition and overlap in four species of the genus Diplectrum (Perciformes: Serranidae) in the Mexican Central Pacific. The information of trophic interactions among species is essential to understand ecosystem function. To assess this in four Diplectrum species, we analyzed the stomach contents of 397 individuals caught using shrimp trawling nets off the coasts of Jalisco and Colima, Mexico. Main food component of D. eumelum were fish of the Order Pleuronectiformes, followed by shrimps (Metapenaeopsis spp). D. euryplectrum feeds mainly on crustaceans, with stomatopods (Squilla mantoidea) as main food items followed by shrimps and brachyurans. Fish and polychaetes had a low representation in the diet of this species. D. labarum feeds mainly on crustaceans, mollusks and fish. The stomatopod Eurysquilla veleronis contributed to with a high diet percentage by weight, followed by shrimps (mostly Solenoceraflorae) and brachyurans, as well as the squid Lolliguncula diomedae. Fishes (Ophidion spp.) were also an important component of the diet of this species. The most common preys of D. rostrum were crustaceans, mollusks, polychaetes and fish. The squid Lolliguncula diomedae and fishes of genus Ophidion were also well represented in the diet. Diet breadth index yielded significant differences between species. The number of diet items varied from 16 in D. euryplectrum to 6 in D. eumelum. The average value of overlap (0.247) was not significantly different (p = 0.118) from the expected one for a null model (0.174). The observed variance of the overlap index (0.071) was significantly higher (V = 0.025, p = 0.0004) than the value expected for a null model. PMID:21250475

  3. Two new species of Aristocleidus (Monogenea) from the gills of the Mexican mojarra Eugerres mexicanus (Perciformes, Gerreidae) from southwestern Mexico.

    PubMed

    Mendoza-Franco, Edgar F; Osorio, Marina Tapia; Caspeta-Mandujano, Juan Manuel

    2015-01-01

    Aristocleidus mexicanus n. sp. and Aristocleidus lacantuni n. sp. are described from the gills of the Mexican mojarra Eugerres mexicanus (Gerreidae, Perciformes) from the Rio Lacantún basin, Chiapas State, Mexico. These new species differ from previously described congeneric species in the characteristics of several structures, including: (a) ventral anchors, with differences in length (i.e. 46-50 µm in A. mexicanus vs. 38-43 µm, 34-37 µm, and 26-33 µm in Aristocleidus hastatus Mueller, 1936, Aristocleidus sp. of Mendoza-Franco, Violante-González & Roche 2009, and Aristocleidus lamothei Kritsky & Mendoza-Franco, 2008, respectively) and shape (i.e. slightly angular union of elongate arcing shaft and point in A. mexicanus vs. point and shaft united at a conspicuous angular bend in A. hastatus and Aristocleidus sp., and evenly curved shaft and point in A. lamothei); (b) male copulatory organ, i.e. a coiled tube with less than one ring in A. mexicanus and A. lacantuni (vs. a coiled tube of about 1½ in Aristocleidus sp.); (c) distal end of the accessory piece (ornate in A. mexicanus vs. distally flattened and trifid in A. hastatus and A. lamothei, respectively); (d) vaginal tube (moderately long in A. mexicanus vs. short in A. lamothei and looping in Aristocleidus sp.); and (e) ventral bar (anteromedial process with terminal horn-like ornamentation in A. lacantuni vs. ornamentation absent in the other species). This study reports for the first time species of Aristocleidus from freshwater environments in Mexico. PMID:26605987

  4. Two new species of Aristocleidus (Monogenea) from the gills of the Mexican mojarra Eugerres mexicanus (Perciformes, Gerreidae) from southwestern Mexico

    PubMed Central

    Mendoza-Franco, Edgar F.; Osorio, Marina Tapia; Caspeta-Mandujano, Juan Manuel

    2015-01-01

    Aristocleidus mexicanus n. sp. and Aristocleidus lacantuni n. sp. are described from the gills of the Mexican mojarra Eugerres mexicanus (Gerreidae, Perciformes) from the Rio Lacantún basin, Chiapas State, Mexico. These new species differ from previously described congeneric species in the characteristics of several structures, including: (a) ventral anchors, with differences in length (i.e. 46–50 µm in A. mexicanus vs. 38–43 µm, 34–37 µm, and 26–33 µm in Aristocleidus hastatus Mueller, 1936, Aristocleidus sp. of Mendoza-Franco, Violante-González & Roche 2009, and Aristocleidus lamothei Kritsky & Mendoza-Franco, 2008, respectively) and shape (i.e. slightly angular union of elongate arcing shaft and point in A. mexicanus vs. point and shaft united at a conspicuous angular bend in A. hastatus and Aristocleidus sp., and evenly curved shaft and point in A. lamothei); (b) male copulatory organ, i.e. a coiled tube with less than one ring in A. mexicanus and A. lacantuni (vs. a coiled tube of about 1½ in Aristocleidus sp.); (c) distal end of the accessory piece (ornate in A. mexicanus vs. distally flattened and trifid in A. hastatus and A. lamothei, respectively); (d) vaginal tube (moderately long in A. mexicanus vs. short in A. lamothei and looping in Aristocleidus sp.); and (e) ventral bar (anteromedial process with terminal horn-like ornamentation in A. lacantuni vs. ornamentation absent in the other species). This study reports for the first time species of Aristocleidus from freshwater environments in Mexico. PMID:26605987

  5. Brain and sense organ anatomy and histology of the Falkland Islands mullet, Eleginops maclovinus (Eleginopidae), the sister group of the Antarctic notothenioid fishes (Perciformes: Notothenioidei).

    PubMed

    Eastman, Joseph T; Lannoo, Michael J

    2008-01-01

    The perciform notothenioid fish Eleginops maclovinus, representing the monotypic family Eleginopidae, has a non-Antarctic distribution in the Falkland Islands and southern South America. It is the sister group of the five families and 103 species of Antarctic notothenioids that dominate the cold shelf waters of Antarctica. Eleginops is the ideal subject for documenting the ancestral morphology of nervous and sensory systems that have not had historical exposure to the unusual Antarctic thermal and light regimes, and for comparing these systems with those of the phyletically derived Antarctic species. We present a detailed description of the brain and cranial nerves of Eleginops and ask how does the neural and sensory morphology of this non-Antarctic notothenioid differ from that seen in the phyletically derived Antarctic notothenioids? The brain of Eleginops is similar to those of visually oriented temperate and tropical perciforms. The tectum is smaller but it has well-developed olfactory and mechanoreceptive lateral line areas and a large, caudally projecting corpus cerebellum. Eye diameter is about twofold smaller in Eleginops than in many Antarctic species. Eleginops has a duplex (rod and cone) retina with single and occasional twin cones conspicuous centrally. Ocular vascular structures include a large choroid rete mirabile and a small lentiform body; a falciform process and hyaloid arteries are absent. The olfactory rosette is oval with 50-55 lamellae, a large number for notothenioids. The inconspicuous bony canals of the cephalic lateral line system are simple with membranous secondary branches that lack neuromasts. In Antarctic species, the corpus cerebellum is the most variable brain region, ranging in size from large and caudally projecting to small and round. "Stalked" brains showing reduction in the size of the telencephalon, tectum, and corpus cerebellum are present in the deep-living artedidraconid Dolloidraco longedorsalis and in most of the deep

  6. Brain and sense organ anatomy and histology of two species of phyletically basal non-Antarctic thornfishes of the Antarctic suborder Notothenioidei (Perciformes: Bovichtidae).

    PubMed

    Eastman, Joseph T; Lannoo, Michael J

    2007-06-01

    The predominantly non-Antarctic family Bovichtidae is phyletically basal within the perciform suborder Notothenioidei, the dominant component of the Antarctic fish fauna. In this article we focus on the South Atlantic bovichtids Bovichtus diacanthus, the klipfish from tide pools at Tristan da Cunha, and Cottoperca gobio, the frogmouth from the Patagonian shelf and Falkland Islands. We document the anatomy and histology of the brains, olfactory apparatus, retina, and cephalic lateral line system. We also use the microvascular casting agent Microfil to examine ocular vascular structures. We provide detailed drawings of the brains and cranial nerves of both species. Typical of perciforms, the brains of both species have a well-developed tectum and telencephalon and robust thalamic nuclei. The telencephalon of C. gobio is prominently lobed, with the dorsomedial nucleus more conspicuous than in any other notothenioid. The corpus cerebelli is relatively small and upright and, unlike other notothenioids, has prominent transverse sulci on the dorsal and caudal surfaces. Areas for lateral line mechanoreception (eminentia granularis and crista cerebellaris) are also conspicuous but olfactory, gustatory, and somatosensory areas are less prominent. The anterior lateral line nerve complex is larger than the posterior lateral line nerve in B. diacanthus, and in their cephalic lateral line systems both species possess branched membranous tubules (which do not contain neuromasts) with small pores. These are especially complex in B. diacanthus where they become increasingly branched and more highly pored in progressively larger specimens. Superficial neuromasts are sparse. Both species have duplex (cone and rod) retinae that are 1.25-fold thicker and have nearly 5-fold more photoreceptors and than those of most Antarctic notothenioids. Convergence ratios are also high for bovichtids. Bovichtus diacanthus has a yellow intraocular filter in the dorsal aspect of the cornea. Both

  7. Redescription and new host record of Capsala laevis (Monogenoidea: Capsalidae: Capsalinae) from gill of roundscale spearfish, Tetrapturus georgii (Perciformes: Istiophoridae) in the northwestern Atlantic Ocean.

    PubMed

    Barse, Ann M; Bullard, Stephen A

    2012-08-01

    Specimens of a capsalid collected from the gill arches of 2 roundscale spearfish, Tetrapturus georgii Lowe, 1840, (Perciformes: Istiophoridae), captured in the northwestern Atlantic Ocean were identified as Capsala laevis (Verrill, 1875) Johnston, 1929 by having the combination of papillae on the ventral surface of haptor, dorsomarginal body sclerites in a single column extending the entire body length, haptoral accessory sclerites, conical papillae distributing over the ventral body surface, and an anterior attachment organ with a fimbriated posterior margin. The new specimens plus the holotype were used to conduct a taxonomic redescription of C. laevis using light and scanning electron microscopy. We documented that the holotype (USNPC No. 7179) and the new specimens of C. laevis from roundscale spearfish each had papillae on the ventral surface of the anterior attachment organs and sensory papillae on the dorsal body surface. Although data are insufficient at this time to justify proposal of a new species, the new specimens differed from the holotype and published accounts of C. laevis by having a sinistral dorsomarginal patch comprising 27-35 sclerites whereas the holotype has a dorsomarginal patch comprising 60 sclerites. Capsala laevis morphologically most closely resembles Capsala ovalis (Goto, 1894) Price, 1938 , but can be most easily differentiated from it by having dorsomarginal body sclerites. This represents the first record of any parasite from the recently taxonomically resurrected roundscale spearfish, long considered by some as a junior subjective synonym of white marlin, Tetrapturus albidus Poey, 1860 and, concomitantly, a new host record for Capsalidae Baird, 1853. An updated list of host records for C. laevis is provided. A perusal of that literature reveals that the identity of the type host for C. laevis is indeterminate beyond Istiophoridae species and that subsequent reports of the type host as ' T. albidus ' are presumptuous (originally

  8. Chronic kisspeptin administration stimulated gonadal development in pre-pubertal male yellowtail kingfish (Seriola lalandi; Perciformes) during the breeding and non-breeding season.

    PubMed

    Nocillado, Josephine N; Zohar, Yonathan; Biran, Jakob; Levavi-Sivan, Berta; Elizur, Abigail

    2013-09-15

    The kisspeptin system is now accepted as a key regulator of vertebrate reproductive function, particularly the onset of puberty. In teleosts, the stimulatory effect of exogenous kisspeptins has been demonstrated mainly at the hypothalamic and pituitary levels of the reproductive axis, with very limited information pertaining to gonadal response. We determined the effect of chronic peripheral administration of the conserved kisspeptin decapeptides (YNLNSFGLRY or Kiss1-10; and FNFNPFGLRF or Kiss2-10) on gonadal development of pre-pubertal yellowtail kingfish (Seriola lalandi), a Perciform teleost, during the breeding and non-breeding season. We utilized slow-release implants to chronically deliver the synthesized peptides, which were based on the yellowtail kingfish kiss1 and kiss2 cDNA sequences that we isolated. The expression level of kiss2r and gnrh1 in the brain or hypothalamus did not vary between treated and control groups. Pituitary expression of fshβ and lhβ was upregulated only with Kiss1-10 treatment regardless of the season. Based on histological evidence, gonadal development was stimulated in male fish with either Kiss1-10 or Kiss2-10, with Kiss2-10 being more effective during the non-breeding period. Overall, our results suggest that kisspeptins modulate the early gonadal development of male yellowtail kingfish, however that may vary with the breeding season. PMID:23791760

  9. The barred grunt Conodon nobilis (Perciformes: Haemulidae) in shallow areas of a tropical bight: spatial and temporal distribution, body growth and diet

    NASA Astrophysics Data System (ADS)

    Pombo, Maíra; Denadai, Márcia Regina; Bessa, Eduardo; Santos, Flávia Borges; de Faria, Vanessa Hermann; Turra, Alexander

    2014-06-01

    This study aimed to comprehensively investigate the population biology of Conodon nobilis (Perciformes, Haemulidae) in Caraguatatuba Bight, southeastern Brazil. Monthly trawls were performed from October 2003 through October 2004 in two areas of the bight that are similar to but distant from each other, South and North. For all specimens, the size was measured and the sex and reproductive stage identified. Abundance and size were compared over areas and months. Body growth parameters were parameterized according to the Von Bertalanffy growth function. The stomach contents were identified and quantified. C. nobilis occurred mainly in the North area and showed an erratic pattern of abundance over time. Several cohorts entered in different periods, but very few large and mature individuals were observed. The results indicate a preference for shallow, ocean-influenced habitats and some degree of segregation between young and older individuals. The species showed a distribution consistent with an r-strategist species, with high abundance and a high growth constant ( K = 0.68 year-1 and L max = 34.2 cm). Both the relative length of the digestive tube and the prey items indicated a carnivorous feeding habit; mysids were the main item of the diet throughout the study period, indicating that this grunt is a specialist feeder. Other frequently observed items were amphipods and fish fragments. Ingestion of scales is possibly intentional.

  10. Characterization of the mitochondrial genome of the Whitefin trevally Carangoides equula (Perciformes: Carangidae): a novel initiation codon for ATP6 gene.

    PubMed

    Zou, Keshu; Li, Min

    2016-05-01

    The complete mitochondrial genome sequence of Carangoides equula (Perciformes: Carangidae) was determined. The size of the genome was 16,588 bp and overall base compositions of the sequence were 26.3% of A, 30.3% of C, 25.3% of T and 18.1% of G, showing an obvious anti G bias commonly observed in teleosts. The genome contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions (the control region and the light strand replication origin). Gene organization and gene order was similar to that observed in most other vertebrates. The initiation codon GTG was detected in the open reading frames of ATPase subunit 6, which was novel for ATP6 gene in Carangidae species. The mitogenome of C. equula shared 84.1% and 84.0% sequence similarity with two other Carangoides species Carangoides malabaricus and Carangoides armatus, respectively. The complete mitogenome sequence data of C. equula could provide useful information for taxonomic and phylogenetics studies. PMID:25259445

  11. Discriminatory profile of rDNA sites and trend for acrocentric chromosome formation in the genus Trachinotus Lacépède, 1801 (Perciformes, Carangidae).

    PubMed

    Jacobina, Uedson Pereira; Vicari, Marcelo Ricardo; Bertollo, Luiz Antonio Carlos; Molina, Wagner Franco

    2012-01-01

    Chromosomal traits have provided valuable information for phylogeny and taxonomy of several fish groups. Three Atlantic Carangidae species of the genus Trachinotus Lacépède, 1801 (Trachinotus goodei Jordan et Evermann, 1896, Trachinotus carolinus (Linnaeus, 1766)and Trachinotus falcatus (Linnaeus, 1758)) were investigated, having 2n=48 chromosomes but different chromosomal arms (FN number), i.e., 52, 56 and 58, respectively, in view of the different number of two-armed chromosomes found in their karyotypes. Thus, Trachinotus goodei, Trachinotus carolinus and Trachinotus falcatus present a progressive distancefrom the probable basal karyotype proposed for Perciformes (2n=48 acrocentrics, FN=48). At first sight, these findings do not agree with the phylogenetic hypothesis based on mitochondrial sequences, where Trachinotus goodei appear as the most derived species, followed by Trachinotus falcatus and Trachinotus carolinus, respectively. However, the chromosomal mapping of ribosomal DNAs was informative for clarifying this apparent conflict. Indeed, the multiple 5S and 18S rDNA sites found in Trachinotus goodei corroborate the most derived condition for this species. In this sense, the occurrence of the unexpected number of two-armed chromosomes and FN value for this species, as well as for Trachinotus carolinus, must be due to additional rounds of acrocentric formation in these species, modifying the macrostructure of their karyotypes. PMID:24260676

  12. Discriminatory profile of rDNA sites and trend for acrocentric chromosome formation in the genus Trachinotus Lacépède, 1801 (Perciformes, Carangidae)

    PubMed Central

    Jacobina, Uedson Pereira; Vicari, Marcelo Ricardo; Bertollo, Luiz Antonio Carlos; Molina, Wagner Franco

    2012-01-01

    Abstract Chromosomal traits have provided valuable information for phylogeny and taxonomy of several fish groups. Three Atlantic Carangidae species of the genus Trachinotus Lacépède, 1801 (Trachinotus goodei Jordan et Evermann, 1896, Trachinotus carolinus (Linnaeus, 1766)and Trachinotus falcatus (Linnaeus, 1758)) were investigated, having 2n=48 chromosomes but different chromosomal arms (FN number), i.e., 52, 56 and 58, respectively, in view of the different number of two-armed chromosomes found in their karyotypes. Thus, Trachinotus goodei, Trachinotus carolinus and Trachinotus falcatus present a progressive distancefrom the probable basal karyotype proposed for Perciformes (2n=48 acrocentrics, FN=48). At first sight, these findings do not agree with the phylogenetic hypothesis based on mitochondrial sequences, where Trachinotus goodei appear as the most derived species, followed by Trachinotus falcatus and Trachinotus carolinus, respectively. However, the chromosomal mapping of ribosomal DNAs was informative for clarifying this apparent conflict. Indeed, the multiple 5S and 18S rDNA sites found in Trachinotus goodei corroborate the most derived condition for this species. In this sense, the occurrence of the unexpected number of two-armed chromosomes and FN value for this species, as well as for Trachinotus carolinus, must be due to additional rounds of acrocentric formation in these species, modifying the macrostructure of their karyotypes. PMID:24260676

  13. Two new species of Cryptocephalum n. gen. (Monogenoidea: Dactylogyridae) from the cephalic lateral line of Percichthys trucha (Perciformes: Percichthyidae) in Patagonia, Argentina.

    PubMed

    Vega, Rocío M; Viozzi, Gustavo P; Brugni, Norma L

    2011-04-01

    Two new species of Monogenoidea were found parasitizing the cephalic lateral line canals of Percichthys trucha (Valenciennes) (Perciformes: Percichthyidae). These species are described as members of a newly proposed genus of Dactylogyridae. Cryptocephalum n. gen. is characterized by the site of infection and the combination of the several features: ventral and dorsal anchor/bar complexes, anchors with strongly elongated shaft and recurved point, shaft and point of dorsal anchors protruding laterally from haptor, hooks with 2 subunits and with pair 5 smaller than the others; gonads overlapping; coiled male copulatory organ with counterclockwise rings, accessory piece formed by 2 distinct parts, and a tubular, sclerotized ventral vagina. C ryptocephalum petreum n. sp. is characterized by having both anchor pairs protruding laterally from haptor, male copulatory organ with a coil of 2-1/2 rings, accessory piece tweezers-shaped, and sclerotized vaginal vestibule. Cryptocephalum spiralis n. sp. has ventral anchors protruding ventrally and dorsal ones protruding laterally, male copulatory organ with a coil of 1-1/2 rings, the antero-dorsal part of the accessory piece saddle-shaped, vaginal vestibule not present, and coiled vagina. This is the first record of Dactylogyridae species parasitizing the cephalic lateral line of fishes. PMID:21506871

  14. [Comparative analysis of three length based methods for estimating growth of the tilapia Oreochromis aureus (Perciformes: Cichlidae) in a tropical lake of Mexico].

    PubMed

    Arellano-Torres, Andrés; Hernández Montaño, Daniel; Meléndez Galicia, Carlos

    2013-09-01

    A comparative analysis of three length based methods for estimating growth of the tilapia Oreochromis aureus (Perciformes: Cichlidae) in a tropical lake of Mexico. Several methods are now available to estimate fish individual growth based upon the distribution of body lengths in a population. Comparative analyses of length-based methods have been undertaken mainly for marine species; nevertheless, limited information is available for inland species. Tilapia is one of the most important freshwater fisheries and its growth parameters have been estimated by several authors, usually using one length-based method. Thus, the main objectives of this study were: a) to estimate growth parameters of O. aureus from Chapala lake, Mexico, using three length-based methods ELEFAN, PROJMAT and SLCA; b) to quantify the effect of input data variations in growth parameters estimates by the jackknife technique; and c) to compare the new estimates with those previously reported, through the standard growth index phi. We collected and analyzed a total of 1,973 specimens from commercial landings from January to December 2010. The three length-base methods used in the present study resulted in parameter estimates within the range of those reported in other studies. Results derived from jackknife analysis revealed lowest values in the error percentage and coefficient of variation for L infinity when applying ELEFAN, while PROJMAT showed lowest values in the precision estimators for K, which was very similar to ELEFAN. Estimates of the comparative growth index phi were also very similar to those reported for the same species when studied in different reservoirs. Considering our results, we suggest the use of ELEFAN rather than SLCA due to its accuracy to estimate growth parameters for O. aureus. PMID:24044136

  15. Six new and one previously described species of Pseudorhabdosynochus (Monogenoidea, Diplectanidae) infecting the gills of groupers (Perciformes, Serranidae) from the Pacific coasts of Mexico and Panama.

    PubMed

    Mendoza-Franco, Edgar F; Violante-González, Juan; Rojas Herrera, Agustín A

    2011-02-01

    Six new and 1 previously described species of Pseudorhabdosynochus (Diplectanidae) are described and/or reported from the gill lamellae of 5 serranid (Perciformes) fish species from the Pacific waters in Guerrero State of Mexico and Panama City, Panama. These species are Pseudorhabdosynochus guerreroensis n. sp. from the Pacific mutton hamlet Alphestes inmaculatus Breder (type host), rivulated mutton hamlet Alphestes multiguttatus (Günther), and spotted grouper Epinephelus analogus Gill from Mexico; Pseudorhabdosynochus urceolus n. sp. from the Pacific graysby Cephalopholis panamensis (Steindachner) from Taboga Island in Panama; Pseudorhabdosynochus spirani n. sp. from the starry grouper Epinephelus labriformis (Jenyns) from Mexico and the Perlas Archipelago and Taboga Island in Panama; Pseudorhabdosynochus fulgidus n. sp. from E. labriformis from Mexico and the Perlas Archipelago and Taboga Island (type locality) in Panama; Pseudorhabdosynochus tabogaensis n. sp. from E. labriformis from Mexico and the Perlas Archipelago and Taboga Island (type locality) in Panama; Pseudorhabdosynochus anulus n. sp. from E. labriformis from Mexico and Taboga Island (type locality) in Panama; and Pseudorhabdosynochus amplidiscatum (Bravo-Hollis, 1954) Kritsky and Beverley-Burton, 1986 from E. analogus and E. labriformis from Mexico and the Perlas Archipelago and Taboga Island in Panama. All new species are mainly distinguished from other species of the genus by the shape and size of the sclerotized vagina and haptoral structures. The present specimens of Alphestes, Cephalopholis, and Epinephelus spp. represent new host records and Panama represents a new geographic record for species of Pseudorhabdosynochus. The apparent common feature supporting a close similarity of these diplectanids is a single, secondary ejaculatory bulb with thickened wall. PMID:21348602

  16. Gene flow, population growth and a novel substitution rate estimate in a subtidal rock specialist, the black-faced blenny Tripterygion delaisi (Perciformes, Blennioidei, Tripterygiidae) from the Adriatic Sea

    PubMed Central

    Koblmüller, Stephan; Steinwender, Bernd; Weiß, Sara; Sefc, Kristina M.

    2015-01-01

    Population histories depend on the interplay between exogeneous and endogeneous factors. In marine species, phylogeographic and demographic patterns are often shaped by sea level fluctuations, water currents and dispersal ability. Using mitochondrial control region sequences (n = 120), we infer phylogeographic structure and historic population size changes of a common littoral fish species, the black-faced blenny Tripterygion delaisi (Perciformes, Blennioidei, Tripterygiidae) from the north-eastern Adriatic Sea. We find that Adriatic T. delaisi are differentiated from conspecific populations in the remaining Mediterranean, but display little phylogeographic structure within the Adriatic basin. The pattern is consistent with passive dispersal of planktonic larvae along cyclonic currents within the Adriatic Sea, but limited active dispersal of adults. Demographic reconstructions are consistent with recent population expansion, probably triggered by rising sea levels after the last glacial maximum (LGM). Placing the onset of population growth between the LGM and the warming of surface waters (18 000–13 000 years BP) and employing a novel expansion dating approach, we inferred a substitution rate of 2.61–3.61% per site per MY. Our study is one of only few existing investigations of the genetic structure of animals within the Adriatic basin and is the first to provide an estimate for mitochondrial control region substitution rates in blennioid fishes. PMID:26617435

  17. Acanthocercodes n. g. (Monogenoidea: Diplectanidae) for species parasitising threadfins (Perciformes: Polynemidae), with description of Acanthocercodes bullardi n. sp. from the Atlantic threadfin Polydactylus octonemus (Girard) and reassignment of three species of Diplectanum Monticelli, 1903 from the Indo-Pacific Ocean.

    PubMed

    Kritsky, Delane C; Diggles, Ben K

    2015-07-01

    Acanthocercodes n. g. (Diplectanidae) is proposed for Acanthocercodes bullardi n. sp. and three previously described species of Diplectanum all parasites of the gill lamellae of threadfins (Perciformes: Polynemidae). The new genus is characterised by species having peduncular spines composed of an anteriorly directed point and a flattened base from which an anterior root arises. Members of the genus lack auxiliary spinous or sucker-like structures in the haptor. Acanthocercodes bullardi n. sp. is described from the Atlantic threadfin, Polydactylus octonemus (Girard), in the Gulf of Mexico off Louisiana, USA. Diplectanum polynemus Tripathi, 1957 is redescribed and transferred to Acanthocercodes as A. polynemus (Tripathi, 1957) n. comb. based on specimens collected from the fourfinger threadfin, Eleutheronema tetradactylum (Shaw), from the mouth of the River Adelaide, Northern Territory, Australia. Diplectanum spinosum (Maillard & Vala, 1980) (=Pseudodiplectanum spinosum Maillard & Vala, 1980) and Diplectanum megacirrus (Maillard & Vala, 1980) (=Pseudodiplectanum megacirrus Maillard & Vala, 1980) from the lesser African threadfin, Galeoides decadactylus (Bloch), are transferred to Acanthocercodes as A. spinosum (Maillard & Vala, 1980) n. comb. and A. megacirrus (Maillard & Vala, 1980) n. comb., respectively. PMID:26063297

  18. Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (South Florida): Gray, lane, mutton, and yellowtail snappers. [Lutjanus griseus; Lutjanus synagris; Lutjanus analis; Ocyurus chrysurus

    SciTech Connect

    Bortone, S.A.; Williams, J.L.

    1986-06-01

    These four snapper species have similar morphologies as well as life history and environmental requirements. With some exceptions they are restricted to tropical and subtropical coastal areas of the western Atlantic. Adults often associate with coral reef and other hard-bottom communities. Juveniles and pre-adults usually inhabit shallow, inshore areas and are often found in seagrass beds. Reproduction usually takes place offshore in the warmer months of the year. Fecundity is positively related to female body size, but there is substantial variation both within and among the species. Juveniles obtain adult body proportions at about 50 mm SL. Approximate total maximum lengths of adults are 900 mm for gray snapper, 446 mm for lane snapper, and 750 mm for mutton and yellowtail snappers. Otoliths are the most preferred body part used to determine age. Most snappers attain sexual maturity after 3 to 5 years at a size range of 180 to 350 mm FL. Males mature at a smaller size than females. Recent commercial catches of gray and lane snappers have been increasing, whereas mutton and yellowtail snappers show no clear trends. Sport fishing probably has a substantial impact on the stocks of all four species. All four snappers feed predominantly on small benthic fishes and crustaceans, but yellowtail snapper feed on more pelagic animals. Upper water temperature tolerance limits are 27.2 to 32.5/sup 0/C and lower limits are 11 to 14/sup 0/C.

  19. Spatial relationships between an introduced snapper and native goatfishes on Hawaiian reefs

    USGS Publications Warehouse

    Schumacher, B.D.; Parrish, J.D.

    2005-01-01

    It has been suggested that the introduced blueline snapper (Lutjanus kasmira, Family: Lutjanidae) may adversely affect populations of native fishery species in Hawai'i through competition for spatial or dietary resources, or through predation on young fish. We studied the habitat use patterns of L. kasmira and several native reef fish species using direct observation by SCUBA divers. Habitat use patterns of the yellowtail goatfish (Mulloidichthys vanicolensis, Family: Mullidae) were most similar to those of L. kasmira. Both species were primarily found low in the water column and were closely associated with areas of vertical relief. Individual M. vanicolensis were found higher in the water column when L. kasmirawere present, but L. kasmira were not similarly affected by M. vanicolensis. This finding suggests asymmetrical competition for shelter, in which the dominant L. kasmira displaces M. vanicolensis farther into the water column. This displacement from the protection of the reef could increase the vulnerability of M. vanicolensisto predators and fishers. ?? Springer 2005.

  20. The Evolutionary Dynamics of Ribosomal Genes, Histone H3, and Transposable Rex Elements in the Genome of Atlantic Snappers.

    PubMed

    Costa, Gideão Wagner Werneck Félix da; Cioffi, Marcelo de Bello; Bertollo, Luiz Antonio Carlos; Molina, Wagner Franco

    2016-03-01

    Lutjanidae is a family of primarily marine and carnivorous fishes distributed in the Atlantic, Indian, and Pacific oceans, with enormous economic and ecological importance. In order to better clarify the conservative chromosomal evolution of Lutjanidae, we analyzed the evolutionary dynamics of 5 repetitive DNA classes in 5 Lutjanus and in 1 Ocyurus species from the Western Atlantic. The ribosomal 18S sites were generally located in a single chromosome pair, except for L. jocu and L. alexandrei where they are found in 2 pairs. In turn, the 5S rDNA sites are unique, terminal and nonsyntenic with the 18S rDNA sites. In 3 species analyzed, H3 hisDNA genes were found in 1 chromosomal pair. However, while L. jocu presented 2 H3 sites, O. chrysurus showed a noteworthy dispersion of this gene in almost all chromosomes of the karyotype. Retrotransposons Rex1 and Rex3 do not exhibit any association with the explosive distribution of H3 sequences in O. chrysurus. The low compartmentalization of Rex elements, in addition to the general nondynamic distribution of ribosomal and H3 genes, corroborate the karyotype conservatism in Lutjanidae species, also at the microstructural level. However, some "disturbing evolutionary waves" can break down this conservative scenario, as evidenced by the massive random dispersion of H3 hisDNA in the genome of O. chrysurus. The implication of the genomic expansion of H3 histone genes and their functionality remain unknown, although suggesting that they have higher evolutionary dynamics than previously thought. PMID:26792596

  1. Larval development of Evermannia zosterura (Perciformes: Gobiidae).

    PubMed

    González-Navarro, Enrique; Saldierna-Martínez, Ricardo Javier; Aceves-Medina, Gerardo

    2014-06-01

    Gobiidae is the most specious fish family in the world with almost 2 000 species, however only 11% of them have been described for their larval stages. The entire life cycle information is essential to understand the biology and ecology of this important fish group. Previous studies on zooplankton samples from Ensenada de La Paz, México, have shown the presence of several Gobiidae larvae and juveniles which were identified as Evermania zosterura. The main objective of this work was to describe the larval stages of this species, widely distributed in the Eastern tropical Pacific. The development of E. zosterura larvae was described based on 66 specimens. A total of 53 specimens were used to describe morphometrics and pigmentation patterns, while 13 specimens were cleared and stained, to obtain meristic characteristics. Cleared specimens had 30 to 31 total vertebrae; dorsal-fin elements: IV; 1, 13-14, anal-fin elements: 1, 13-14, and most had pterygiophore formula 4-111100. The combination of these characteristics confirmed these specimens as E. zosterura. The pigment pattern is similar throughout ontogeny. Larvae are characterized by having three to five dendritic melanophores along the post-anal ventral margin, four to nine smaller melanophores along the ventral margin between the isthmus and anus, and one on the midpoint of the dorsal margin of the tail. There is one small pigment spot on the angle of the jaw, and other on the tip of lower lip. There is an elongated internal pigment under the notochord, between the head and gas bladder. Notochord flexion starts near 3.5mm BL and ends at 4.6mm BL; transformalion to the juvenile stage is at about 13.6mm BL. Our conclusion is that the most useful characters to distinguish this species early-larval stages from those of similar species in the area, are the number of myomeres, the large melanophores (approximately uniformly in size) on the post anal ventral margin, and the elongate internal pigment under the notochord, anterior to the gas bladder. PMID:25102643

  2. Protozoal and epitheliocystis-like infections in the introduced bluestripe snapper (Lutjanus kasmira) in Hawaii

    USGS Publications Warehouse

    Work, T.M.; Rameyer, R.A.; Takata, G.; Kent, M.L.

    2003-01-01

    The bluestripe snapper, or taape, was introduced into Hawaii in the 1950s and has since become very abundant throughout the archipelago. As part of a health survey of reef fish in Hawaii, we necropsied 120 taape collected from various coastal areas south of Oahu and examined fish histology for extraintestinal organisms. Forty-seven percent of taape were infected with an apicomplexan protozoan compatible with a coccidian. Infection was evident mainly in the spleen and, less commonly, the kidney. Prevalence of this coccidian increased with size of fish, and we saw no significant pathology associated with the organism. Twenty-six percent of taape were also infected with an epitheliocystis-like organism that occurred mainly in the kidney and, less commonly, the spleen. In contrast to the coccidian, fish mounted a notable inflammatory response to the epitheliocystis-like organism, and this inflammation appeared to increase in severity with age. Prevalence of the epitheliocystis-like organism infection increased with age, but infection was not seen in fish greater than 26.5 cm fork length. The high prevalence of coccidial infection in introduced taape prompts the concern that these organisms, along with the epitheliocystis-like organism, have the potential to be transmitted to native reef fish. Given the impact of other introduced microbial organisms on native Hawaiian fauna, there is a clear need to assess whether protozoa and bacteria are endemic to Hawaii, and whether they negatively impact native reef fish that closely associate with taape.

  3. The complete mitochondrial genome of Lucioperca lucioperca (Perciformes: Percidae).

    PubMed

    Zhao, Guang; Xie, Peng; Kanu, Unisa Conteh; Li, Yu; Niu, Jiangong; Ma, Xufa

    2016-09-01

    The complete nucleotide sequence of the mitochondrial genome of Lucioperca lucioperca was cloned and sequenced in this study, which contained 16,542 bp. Results showed that the sequence was made up of 13 proteins, 22 transfer RNAs and 2 ribosomal RNA genes. The control region and the origin of the light strand replication were similar to other vertebrates. All protein-coding genes began with ATG except for COX1 and COX2, the COX1 genes started with ATC and COX2 genes started with ATT, while all of those ended with TAA, TA, T or TAG. The result could be used in related studies such as molecular ecology and evolutionary biology. PMID:25630724

  4. Mitochondrial genome of the Mackerel scad Decapterus macarellus (Perciformes: Carangidae).

    PubMed

    Zou, Keshu; Chen, Zuozhi; Zhang, Peng; Li, Min

    2016-05-01

    The complete mitochondrial genome sequence was determined for the Mackerel scad Decapterus macarellus, one species of the economically important fish in Carangidae. The entire sequence of the genome was 16,544 bp in length, including the typical structure of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 1 non-coding control region. Overall base compositions of the sequence were 27.3% of A, 30.4% of C, 25.3% of T and 17.0% of G, showing an obvious anti-G bias commonly observed in teleosts. The mitogenome of Decapterus macarellus had a quite high-sequence similarity (92.5%) with D. macrosoma, which was morphologically close to D. macarellus. The complete mitogenome sequence data of D. macarellus could provide useful information for taxonomic and phylogenetics studies. PMID:25423525

  5. The complete mitochondrial genome of the Parastromateus niger (Perciformes, Carangidae).

    PubMed

    Chen, Huapu; Xie, Zhenzhen; Huang, Hongxin; Yang, Zhenguo; Zhang, Youran; Zhang, Jingjing; Li, Shuisheng; Zhang, Yong

    2016-01-01

    In this study, we have sequenced the complete mitochondrial genome of the Parastromateus niger. The mitochondrial genome is 16,561 bp long and contains 13 protein-coding genes, two rRNA genes, 22 tRNA genes and a control region. The gene order and composition of Parastromateus niger mitochondrial genome is similar to that of most other vertebrates. The nucleotide compositions of the light strand are 28.23% of A, 29.51% of C, 26.01% of T and 16.16% of G. With the exception of five tRNA genes, all other mitochondrial genes are encoded on the heavy strand. PMID:24617473

  6. Whole mitogenome of the Japanese scad Decapterus maruadsi (Perciformes: Carangidae).

    PubMed

    Li, Min; Chen, Zuozhi; Chen, Tao; Xiong, Dan; Fan, Jiangtao; Liang, Peiwen

    2016-01-01

    The Japanese scad (Decapterus maruadsi) is one of the most commercially important fish species that is popularly harvested in tropical and temperate seas in South East Asian countries. In the present study, we obtained the whole mitochondrial genome sequence of D. maruadsi by overlapped polymerase chain reactions. The entire sequence was 16,541 bp in length, with a gene content (13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 2 non-coding regions: the control region and the light strand replication origin) and organization similar to most of the other vertebrates. Overall base composition of the genome was 27.5% of A, 30.2% of C, 25.5% of T and 16.8% of G, showing an obvious anti G bias commonly observed in teleosts. The sequence data of D. maruadsi could provide useful information for the studies on conservation genetics and molecular phylogenetics. PMID:24621222

  7. [Reproductive behavior of Opistognathus rosenblatti (Perciformes: Opistognathidae) in captivity].

    PubMed

    Contreras, Mauricio; Anguas, Benjamín; González, Pedro G; Martínez, Rodolfo E

    2012-09-01

    The Blue Spotted Jawfish O. rosenblatti, is an endemic species from the Gulf of California, included in the local list of protected species. With few biological reports, this species is appreciated in the aquarium industry due to its coloration and digging behaviour, and has a considerable value. With the aim to generate valuable biological information, eight fishes were caught at Loreto Natural Marine Protected Area. Captured fishes were juveniles, and just three of them were kept in an aquarium conditioned with gravel, pieces of shells and coral as substrata. Temperature and photoperiod conditions were stable, and they were supplied with a variety of live and inert feeds. Fishes reached maturity in eight months, according to literature reports, displaying mature male courtship coloration and upward movements in the water column. Fishes spawned several times over more than two years in captivity. Presences of egg masses, or some evidence of egg shell or larvae, were registered in 50 occasions. Male took care of eggs in his shelter, but never in his mouth. Egg masses had an average of 3 592 eggs, with a hatching rate close to 99%. Eggs were apparently rounded having three diameter measurements with significant differences (1.17mm mean higher diameter, SD=0.054; 1.13mm mean lower diameter, 0.058; 0.99mm mean height, 0.045; n=125). Most of corion eggs had four, rarely six filaments; with a single oil drop (0.30mm mean diameter, 0.021, n=59). Incubation lasted 10.4 days (9-14), depending on water temperature (21.0-25.3 degrees C). Egg hatching occurred after darkness, emerging newly hatched larvae of 4.51mm mean notochord length (0.082, n=30), with reserves exhausted, eyes pigmented and mouth opened, ready to eat. This study represents the first report on this species courtship displaying, spawning and some basic characteristics of eggs masses and larvae in captivity. Also, their flexibility and adaptability of individual behaviour to particular environment conditions, lead to consider worth their commercial culture, as already occur with other species of this family. PMID:23025099

  8. Complete mitochondrial genome of striped gourami, Trichogaster fasciata (Perciformes: Osphronemidae).

    PubMed

    Chen, Xialian; Luo, Lin; He, Huan; Tian, Yinshuai; Bai, Jie

    2016-09-01

    The complete mitochondrial genome of Trichogaster fasciata is determined in this study. It is 16,635 bp in size and consists of 2 rRNA genes, 13 protein-coding genes, 22 tRNA genes and 1 non-coding control region (D-loop). The overall base composition of the heavy strand of the T. fasciata mitochondrial genome is A: 29.18%, T: 30.22%, C: 25.14%, and G: 15.46%. A 78 bp AT tandem repeats was identified in the control region. This present study will be helpful to bring out the fact of genetic divergence among the genus Trichogaster. PMID:25765086

  9. The complete mitochondrial genome of the Epinephelus akaara (Perciformes: Serranidae).

    PubMed

    Xie, Zhenzhen; Xiao, Ling; Wang, Xiang; Tang, Lin; Tang, Zhujing; Liu, Yali; Chen, Huimin; Li, Shuisheng; Zhang, Yong; Lin, Haoran

    2016-05-01

    The complete mitochondrial genome of the Epinephelus akaara was presented in this study. The mitochondrial genome is 16,743 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The gene order and composition of Epinephelus akaara mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand are 27.31% of A, 16.20% of C, 28.68% of T and 27.81% of G. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. PMID:25405908

  10. The complete mitochondrial genome of the Rhabdosargus sarba (Perciformes: Sparidae).

    PubMed

    Li, Jianzhen; Yang, Huirong; Xie, Zhenzhen; Yang, Xiankuan; Xiao, Ling; Wang, Xiang; Li, Shuisheng; Chen, Mingliang; Zhao, Huihong; Zhang, Yong

    2016-05-01

    The complete mitochondrial genome of the Rhabdosargus sarba was presented in our study. The mitochondrial genome is 16,644 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The gene order and composition of R. sarba mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand are 27.01% of A, 17.96% of C, 26.02% of T and 29.01% of G. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. PMID:25208166

  11. The complete mitochondrial genome of Nibea coibor (Perciformes: Sciaenidae).

    PubMed

    Shan, Binbin; Zhao, Linlin; Gao, Tianxiang; Lu, Huosheng; Yan, Yunrong

    2016-05-01

    In this study, the complete mitochondrial genome (mitogenome) sequence of Nibea coibor has been determined by long polymerase chain reaction and primer walking methods. The complete mitochondrial genome is 16,509 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA (rRNA), 22 transfer RNA (tRNA)) and a control region as other bony fishes. Within the control region, we identified the termination-associated sequence domain (TAS), the central conserved sequence block domains (CSB-F, CSB-E, CSB-D and CSB-C), and the conserved sequence block domains (CSB-2, CSB-3). PMID:25228377

  12. The complete mitochondrial genome of the Ephippus orbis (Perciformes: Ephippidae).

    PubMed

    Wang, Qian; Wu, Zhongjie; Sun, Dongyan; Luo, Jian

    2016-09-01

    The complete mitochondrial genome of the Ephippus orbis has been sequenced. The mitochondrial genome is 16 670 bp in length, containing 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and one control region. The gene order and the composition of E. orbis mitochondrial genome were similar to that of most other vertebrates. The overall nucleotides base composition of the heavy strand is A (27.17%), G (16.41%), C (31.46%), and T (24.96%). With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Seen from the phylogenetic tree ( Figure 1 ), E. orbis, Platax teira, and Platax orbicularis from the same family (Ephippidae) clustered into one branch and were significantly divergent from the other families of closely related fish species. PMID:26258507

  13. The complete mitochondrial genome of Sillago asiatica (Perciformes: Sillaginidae).

    PubMed

    Xiao, Jiaguang; Song, Na; Gao, Tianxiang; Zhao, Yuhui

    2016-05-01

    In this study, the complete mitochondrial genome (mitogenome) sequence of Sillago asiatica has been determined by long polymerase chain reaction and primer walking methods. The complete mitochondrial genome is a circular molecule of 16,493 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA (rRNA), 22 transfer RNA (tRNA)), and a control region as other bony fishes. Within the control region, we identified the termination-associated sequence domain (TAS), the central conserved sequence block domains (CSB-F, CSB-E and CSB-D), and the conserved sequence block domains (CSB-1, CSB-2 and CSB-3). PMID:25231722

  14. Complete mitochondrial genome of the Taractes rubescens (Perciformes: Bramidae).

    PubMed

    Liu, Xiaobing; Tian, Siquan; Li, Weiwen; Wu, Feng; Dai, Xiaojie

    2016-07-01

    Taractes rubescens is a high vulnerable species which widely distributes in tropical and subtropical water in Pacific and Atlantic Ocean. The complete mitogenome sequence of T. rubescens was determined in this study. The complete mitogenome of T. rubescensis 16 720 bp in length, which contains 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs and a control region (D-loop). Furthermore, base composition of A, C, G and T is estimated to be 27.6%, 30.9%, 15.8% and 25.7%, respectively. The complete mtDNA sequence of T. rubescens provides a useful data for studying on the molecular systematic, stock assessment and conservation genetics. PMID:26258509

  15. The complete mitochondrial genome of the Drepane punctata (Perciformes: Drepanidae).

    PubMed

    Xie, Junfeng; Xie, Zhenzhen; Peng, Chen; Xu, Wen; Wang, Qing; Chen, Huapu; Li, Shuisheng; Zhang, Yong; Lin, Haoran

    2016-05-01

    The complete mitochondrial genome of the Drepane punctata was presented in our study. The mitochondrial genome is 16,397 bp long and consists of 13 protein-coding genes, two rRNA genes, 16 tRNA genes and a control region. The gene order and composition of D. punctata mitochondrial genome was different from that of most other vertebrates. The nucleotide compositions of the light strand are 24.56% of A, 16.02% of C, 27.81% of T and 31.61% of G. With the exception of the NADH dehydrogenase subunit 6 (ND6) and five tRNA genes, all other mitochondrial genes are encoded on the heavy strand. PMID:25219777

  16. The complete mitochondrial genome of perch Perca fluviatilis (Perciformes: Percidae).

    PubMed

    Yang, Ruibin; Ma, Zhihong; Beliczky, Gabor; Havasi, Mate; Bercsenyi, Miklos

    2016-05-01

    In this study, we cloned and sequenced the complete mitochondrial genome of Perca fluviatilis. It was a circular double-stranded DNA molecule of 16,537 base pairs (bp) in length and consists of 13 protein-coding genes, 22 tRNA genes, two ribosomal RNA genes and two main non-coding regions (the control region and the origin of the light strand replication). The mitogenome of shared common features with those of other toleosts in terms of gene order and base composition. All protein-coding genes were initiated with ATG except for COX 1, which began with GTG instead. However, the termination codons of 13 protein-coding genes are varied with TAG, TAA or T. This mitogenome sequence data would contribute to better understanding phylogenetic relationships and population genetics of the family Percidae. PMID:25319279

  17. Complete mitochondrial genome of the Nemipterus virgatus (Perciformes: Nemipteridae).

    PubMed

    Wu, Zhongjie; Li, Xiangmin

    2016-09-01

    The complete mitochondrial genome of the Nemipterus virgatus has been sequenced. The mitochondrial genome is 16 992 bp in length, containing 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and one control region. The gene order and composition of N. virgatus mitochondrial genome was similar to that of most other vertebrates. The overall nucleotides base composition of the light strand is A (27.89%), G (26.61%), C (16.45%), T (29.05%). With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. The tRNA-Ser2 gene lacked DHC arm and could not fold into a typical clover-leaf secondary structure. Seen from the phylogenetic tree, N. virgatus, Nemipterus japonicus, and Nemipterus bathybius from the same genus clustered into one branch. PMID:26258518

  18. The complete mitochondrial genome of Perca schrenkii (Perciformes: Percidae).

    PubMed

    Zheng, Yuanyuan; Zhou, Qiong; Zhang, Xiujie; Xie, Congxin; Cai, Lingang; Gao, Zexia

    2016-07-01

    The complete mitochondrial genome of Perca schrenkii was obtained in the present study. The total length of the mitogenome was 16 536 bp in accordance with other teleost fish. It consisted of 37 genes (13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes) and 2 main non-coding regions (the control region and the origin of the light strand replication). All protein-coding genes started with ATG except for COX1, which began with GTG. However, the termination codons of 13 protein-coding genes were varied with TAA, TA, T or TAG. The overall base composition in descending order was T 27.9%, C 27.7%, A 27.1% and G 17.4%, with a slight A + T bias. The complete mitochondrial genome sequence may provide important information for phylogenetic analysis and studies on the population genetics of P. schrenkii. PMID:26122343

  19. The complete mitochondrial genome of the Epinephelus lanceolatus (Perciformes: Serranidae).

    PubMed

    Wang, Xiang; Wang, Qing; Xie, Zhenzhen; He, Jianan; Wang, Dengdong; Chen, Huimin; Li, Shuisheng; Zhang, Yong; Lin, Haoran

    2016-05-01

    The complete mitochondrial genome of the Epinephelus lanceolatus was presented in this study. The mitochondrial genome is 16,743 bp long and consists of 13 protein-coding genes, two rRNA genes, 22 tRNA genes and a control region. The gene order and composition of E. lanceolatus mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand are 26.55% of A, 15.02% of C, 29.67% of T and 28.76% of G. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. PMID:25286235

  20. The complete mitochondrial genome of Sillago sihama (Perciformes: Sillaginidae).

    PubMed

    Siyal, Fozia Khan; Xiao, Jiaguang; Song, Na; Gao, Tianxiang

    2016-07-01

    In this study, the complete mitochondrial genome (mitogenome) sequence of Sillago sihama has been determined by long polymerase chain reaction and primer walking methods. The complete mitochondrial genome is a circular molecule of 17 003 bp in length and contains 37 mitochondrial genes and a control region. Within the control region, we identified the variable number tandem repeats, as well as the termination-associated sequence domain (TAS), the central conserved sequence block domains (CSB-F∼CSB-A) and the conserved sequence block domains (CSB-1, CSB-2, and CSB-3). PMID:26226594

  1. Characteristics of complete mitogenome of Pampus sp. nov. (Perciformes: Stromateidae).

    PubMed

    Li, Yuan; Zhang, Zhaohui; Song, Na; Gao, Tianxiang

    2016-05-01

    Pampus sp. nov. is a new species in genus Pampus and different from six reported Pampus species at the molecular level. Long PCR and primer walking methods are employed for determining the complete mitochondrial genome sequence of the new species. The mitogenome is a circular molecule of 16,560 bp in length including the structure of 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes and two non-coding regions (L-strand replication origin and control region). Within the control region, we identify the termination-associated sequence domain (TAS), central conserved domain (CSB-F, CSB-E and CSB-D), and three conserved sequence blocks (CSB-1, CSB-2 and CSB-3). PMID:25228372

  2. The complete mitochondrial genome of the Terapon jarbua (Perciformes: Terapontidae).

    PubMed

    Wu, Guangcan; Wu, Changsong; Wang, Qian; Luo, Jian

    2016-09-01

    In the present study, the complete mitochondrial genome of the Terapon jarbua has been sequenced. The mitochondrial genome is 16,570 bp in length, containing 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and one control region. The gene order and the composition of T. jarbua mitochondrial genome were similar to that of most other vertebrates. The overall nucleotides base composition of the heavy strand is A (27.36%), G (16.57%), C (29.87%), and T (26.20%). With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. The tRNA-Ser2 gene lacked DHC arm and could not fold into a typical clover-leaf secondary structure. Seen from the phylogenetic tree, T. jarbua, Bidyanus bidyanus, and Rhynchopelates oxyrhynchus from the same family (Terapontidae) clustered into one branch and were significantly divergent from the other families of closely related fish species. PMID:25996955

  3. The complete mitochondrial genome of Eleotris oxycephala (Perciformes: Eleotridae).

    PubMed

    Meng, Yongyong; Ma, Hongyu; Ma, Chunyan; Wei, Hongqing; Liu, Yuexing; Zhang, Fengying; Wang, Wei; Chen, Wei; Zhao, Mengdi; Chen, Fenfang; Ma, Lingbo

    2016-09-01

    In the present study, we obtained the complete mitochondrial genome sequence of Eleotris oxycephala, which was 16 527 bp in length. This genome consisted of 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and a putative control region. Of the 37 genes, 28 were encoded by heavy strand, while nine were encoded by light strand. The overall base composition of this mitogenome was 28.21% for A, 16.81% for G, 24.75% for T, 30.23% for C, respectively, with a slight higher A + T content (52.96%). The phylogenetic analysis based on 13 concatenated protein-coding genes suggested that E. oxycephala as a sister species to Eleotris acanthopoma was clustered in family Eleotridae. This complete mitochondrial genome sequence of E. oxycephala should be helpful for the studies on population genetic structure, molecular evolution and phylogeny of E. oxycephala and related species. PMID:27158874

  4. The complete mitochondrial genome of Diploprion bifasciatum (Perciformes, Serranidae).

    PubMed

    Wang, Huan; Guo, Limei; Ding, Shao-Xiong

    2016-09-01

    The complete mitochondrial genome (mitogenome) of Diploprion bifasciatum was first determined. The mitogenome was 16,805 bp in length and contained 13 protein-coding genes, 24 tRNAs, 2 rRNA, and 2 non-coding regions. The overall base composition of the mitogenome was estimated to be T 25.72%, G 17.10%, A 28.24%, and C 28.94%, with a slight A + T bias of 53.96%, indicating an obvious anti-G bias commonly observed invertebrates. It shared 78.9%, 78.7%, 76.8%, and 72.5% identities with that of Grammistes sexlineatus, Epinephelus moara, Plectropomus areolatus, and Hypoplectrus gemma, respectively. PMID:25806580

  5. Complete mitochondrial genome of black porgy Acanthopagrus schlegelii (Perciformes, Sparidae).

    PubMed

    Shi, Xiaofeng; Su, Yongquan; Wang, Jun; Ding, Shaoxiong; Mao, Yong

    2012-08-01

    Black porgy, Acanthopagrus schlegelii, is a marine protandrous hermaphrodite and belongs to one of the most important species commercialized for food in various areas of Asia. In this study, the complete mitochondrial genome of A. schlegelii has been determined. The mitogenome was 16,649 bp in length and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and 2 non-coding regions. It shared 90.2%, 82.3%, and 82.1% mitogenome sequence with Acanthopagrus latus, Parargyrops edita, and Pagrus major, respectively. PMID:22591205

  6. Survey of ciguatera at Enewetak and Bikini, Marshall Islands, with notes on the systematics and food habits of ciguatoxic fishes

    SciTech Connect

    Randall, J.E.

    1980-04-01

    A total of 551 specimens of 48 species of potentially ciguatoxic fishes from Enewetak and 256 specimens of 23 species from Bikini, Marshall Islands, were tested for ciguatoxin by feeding liver or liver and viscera from these fishes to mongooses at 10% body weight (except for sharks, when only muscle tissue was used). The fishes are representatives of the following families: Orectolobidae, Carcharhinidae, Dasyatidae, Muraenidae, Holocentridae, Sphyraenidae, Mugilidae, Serranidae, Lutjanidae, Lethrinidae, Carangidae, Scombridae, Labridae, Scaridae, Acanthuridae, and Balistidae. The species selected were all ones for which toxicity can be expected, including the worst offenders from reports of ciguatera throughout Oceania; only moderate to large-sized adults were tested. In all, 37.3% of the fishes from Enewetak and 19.7% from Bikini gave a positive reaction for ciguatoxin. Because liver and other viscera are more toxic than muscle, the percentage of positive reactions at the level which might cause illness in humans eating only the flesh of these fishes collectively would drop to 16.2 for Enewetak and 1.4 for Bikini. This level of toxicity is not regarded as high for Pacific islands, in general. Because ciguatoxin is acquired through feeding, the food habits of these fishes were investigated. Most of the highly toxic species, including seven of the eight causing severe illness or death in the test animals (Lycodontis javanicus, Cephalopholis argus, Epinephelus hoedtii, E. microdon, Plectropomus leopardus, Aprion virescens, and Lutjanus bohar) are primarily piscivorous.

  7. High Connectivity in the Deepwater Snapper Pristipomoides filamentosus (Lutjanidae) across the Indo-Pacific with Isolation of the Hawaiian Archipelago

    PubMed Central

    Gaither, Michelle R.; Jones, Shelley A.; Kelley, Christopher; Newman, Stephen J.; Sorenson, Laurie; Bowen, Brian W.

    2011-01-01

    In the tropical Indo-Pacific, most phylogeographic studies have focused on the shallow-water taxa that inhabit reefs to approximately 30 m depth. Little is known about the large predatory fishes, primarily snappers (subfamily Etelinae) and groupers (subfamily Epinephelinae) that occur at 100–400 m. These long-lived, slow-growing species support fisheries across the Indo-Pacific, yet no comprehensive genetic surveys within this group have been conducted. Here we contribute the first range-wide survey of a deepwater Indo-Pacific snapper, Pristipomoides filamentosus, with special focus on Hawai'i. We applied mtDNA cytochrome b and 11 microsatellite loci to 26 samples (N = 1,222) collected across 17,000 km from Hawai'i to the western Indian Ocean. Results indicate that P. filamentosus is a highly dispersive species with low but significant population structure (mtDNA ΦST = 0.029, microsatellite FST = 0.029) due entirely to the isolation of Hawai'i. No population structure was detected across 14,000 km of the Indo-Pacific from Tonga in the Central Pacific to the Seychelles in the western Indian Ocean, a pattern rarely observed in reef species. Despite a long pelagic phase (60–180 days), interisland dispersal as adults, and extensive gene flow across the Indo-Pacific, P. filamentosus is unable to maintain population connectivity with Hawai'i. Coalescent analyses indicate that P. filamentosus may have colonized Hawai'i 26 K–52 K y ago against prevailing currents, with dispersal away from Hawai'i dominating migration estimates. P. filamentosus harbors low genetic diversity in Hawai'i, a common pattern in marine fishes, and our data indicate a single archipelago-wide stock. However, like the Hawaiian Grouper, Hyporthodus quernus, this snapper had several significant pairwise comparisons (FST) clustered around the middle of the archipelago (St. Rogatien, Brooks Banks, Gardner) indicating that this region may be isolated or (more likely) receives input from Johnston Atoll to the south. PMID:22216141

  8. Phylogeographic analyses of submesophotic snappers Etelis coruscans and Etelis "marshi" (family Lutjanidae) reveal concordant genetic structure across the Hawaiian Archipelago.

    PubMed

    Andrews, Kimberly R; Moriwake, Virginia N; Wilcox, Christie; Grau, E Gordon; Kelley, Christopher; Pyle, Richard L; Bowen, Brian W

    2014-01-01

    The Hawaiian Archipelago has become a natural laboratory for understanding genetic connectivity in marine organisms as a result of the large number of population genetics studies that have been conducted across this island chain for a wide taxonomic range of organisms. However, population genetic studies have been conducted for only two species occurring in the mesophotic or submesophotic zones (30+m) in this archipelago. To gain a greater understanding of genetic connectivity in these deepwater habitats, we investigated the genetic structure of two submesophotic fish species (occurring ∼200-360 m) in this archipelago. We surveyed 16 locations across the archipelago for submesophotic snappers Etelis coruscans (N = 787) and E. "marshi" (formerly E. carbunculus; N = 770) with 436-490 bp of mtDNA cytochrome b and 10-11 microsatellite loci. Phylogeographic analyses reveal no geographic structuring of mtDNA lineages and recent coalescence times that are typical of shallow reef fauna. Population genetic analyses reveal no overall structure across most of the archipelago, a pattern also typical of dispersive shallow fishes. However some sites in the mid-archipelago (Raita Bank to French Frigate Shoals) had significant population differentiation. This pattern of no structure between ends of the Hawaiian range, and significant structure in the middle, was previously observed in a submesophotic snapper (Pristipomoides filamentosus) and a submesophotic grouper (Hyporthodus quernus). Three of these four species also have elevated genetic diversity in the mid-archipelago. Biophysical larval dispersal models from previous studies indicate that this elevated diversity may result from larval supplement from Johnston Atoll, ∼800 km southwest of Hawaii. In this case the boundaries of stocks for fishery management cannot be defined simply in terms of geography, and fishery management in Hawaii may need to incorporate external larval supply into management plans. PMID:24722193

  9. Identification of putative cathepsin S in mangrove red snapper Lutjanus argentimaculatus and its role in antigen presentation.

    PubMed

    Zhou, Jin; Li, Lei; Cai, Zhong-Hua

    2012-05-01

    Cathepsin S (CTSS) is a key enzyme employed in the histocompatibility complex (MHC) class II-restricted antigens, which are presented by processing class II-associated invariant chains and loaded antigen peptides into class II molecules. To date, little is known about the character and function of CTSS in fish. In the present study, we screened and identified a CTSS cDNA sequence from the mangrove red snapper head kidney cDNA library. The full-length CTSS cDNA contained 1339-bp nucleotide acids encoding 337 amino acids. The sequence shared high identity and similarity with other known cathepsins, especially CTSS (about 56-78% and 79-89%, respectively). Like other cathepsins, the deduced peptide consisted of regions with N-terminal signal peptides, propeptides, and mature peptides. A typical ERWNIN motif in L-like cathepsins and three conservative catalytic activity sites forming a catalytic triad active center were respectively identified in the pro-peptide and mature peptide regions of CTSS. Phylogenetic analysis revealed that mangrove red snapper CTSS was located in the CTSS clade belonging to the L-like cathepsin group, and evolved from the same ancestry. To further characterize the biological activity of the putative CTSS of mangrove snapper, CTSS was expressed in Escherichia coli M15 strains. Like other mammalian CTSS, the recombinant CTSS (rCTSS) had autocatalytic activation properties, can remove pro-peptides, and can release active mature peptides. Active CTSS had the ability to catalyze Z-Phe-Arg-AMC substrates in acidic conditions (pH 5.0) and weak alkaline environments (pH 7.5); this activity could be blocked by the cysteine protease inhibitor E-64. Active CTSS can process recombinant Ii chains (invariant chains) in a stepwise manner in vitro. The results indicate that mangrove red snapper CTSS is a lysosomal cysteine protease family member with a key role in antigen processing in fish. PMID:22210546

  10. Phylogeographic Analyses of Submesophotic Snappers Etelis coruscans and Etelis “marshi” (Family Lutjanidae) Reveal Concordant Genetic Structure across the Hawaiian Archipelago

    PubMed Central

    Andrews, Kimberly R.; Moriwake, Virginia N.; Wilcox, Christie; Grau, E. Gordon; Kelley, Christopher; Pyle, Richard L.; Bowen, Brian W.

    2014-01-01

    The Hawaiian Archipelago has become a natural laboratory for understanding genetic connectivity in marine organisms as a result of the large number of population genetics studies that have been conducted across this island chain for a wide taxonomic range of organisms. However, population genetic studies have been conducted for only two species occurring in the mesophotic or submesophotic zones (30+m) in this archipelago. To gain a greater understanding of genetic connectivity in these deepwater habitats, we investigated the genetic structure of two submesophotic fish species (occurring ∼200–360 m) in this archipelago. We surveyed 16 locations across the archipelago for submesophotic snappers Etelis coruscans (N = 787) and E. “marshi” (formerly E. carbunculus; N = 770) with 436–490 bp of mtDNA cytochrome b and 10–11 microsatellite loci. Phylogeographic analyses reveal no geographic structuring of mtDNA lineages and recent coalescence times that are typical of shallow reef fauna. Population genetic analyses reveal no overall structure across most of the archipelago, a pattern also typical of dispersive shallow fishes. However some sites in the mid-archipelago (Raita Bank to French Frigate Shoals) had significant population differentiation. This pattern of no structure between ends of the Hawaiian range, and significant structure in the middle, was previously observed in a submesophotic snapper (Pristipomoides filamentosus) and a submesophotic grouper (Hyporthodus quernus). Three of these four species also have elevated genetic diversity in the mid-archipelago. Biophysical larval dispersal models from previous studies indicate that this elevated diversity may result from larval supplement from Johnston Atoll, ∼800 km southwest of Hawaii. In this case the boundaries of stocks for fishery management cannot be defined simply in terms of geography, and fishery management in Hawaii may need to incorporate external larval supply into management plans. PMID:24722193

  11. ATPase 8/6 GENE BASED GENETIC DIVERSITY ASSESSMENT OF SNAKEHEAD MURREL, Channa striata (Perciformes, Channidae).

    PubMed

    Baisvar, V S; Kumar, R; Singh, M; Singh, A K; Chauhan, U K; Nagpure, N S; Kushwaha, B

    2015-10-01

    The mitochondrial DNA (mtDNA) ATPase 8/6 gene has been used in phylogenetic as well as in phylogeographic studies along with other mtDNA markers. In this study, ATPase gene sequences were used to assess the genetic structuring and phylogeographic patterns in Channa striata. Out of 884 nucleotide positions generated in ATPase 8/6 genes, 76 were polymorphic. The study suggested 23 unique haplotypes from 67 individuals of nine populations collected from different riverine systems of India. The ATPase 8/6 sequence revealed highest haplotype as well as nucleotide diversities in Imphal River population and lowest diversities in Tapti River population. The pattern of genetic diversity and haplotype network indicated distinct mitochondrial lineages for Chaliyar population, whereas mismatch distribution strongly suggested a population expansion in mid pleistocene epoch (0.4 Mya) with distinct genetic structuring in C. striata. The baseline information on genetic variation and the population sub-structuring would facilitate conservation and management of this important snakehead murrel. PMID:27169232

  12. The complete mitochondrial genome of jade perch, Scortum barcoo (Perciformes: Terapontidae: Scortum).

    PubMed

    Liu, Chun; Li, Kaibin; Wang, Qing; Wang, Fang; Zeng, Weiwei; Mai, Xiaomei; Wu, Shuqin

    2016-09-01

    This is the first documentation of the complete mitochondrial genome sequence of the jade perch, Scortum barcoo. The 16,843 bp mitogenome containes 37 genes (13 protein-coding genes, 22 transfer RNA genes, and 2 ribosomal RNA genes) and two main non-coding regions (the control region and the origin of the light strand replication) as do other vertebrate mitogenomes. The overall base composition of S. barcoo is 27.39% for A, 24.74% for T, 31.14% for C and 16.73% for G, with a slight A + T bias of 52.13%. All protein-coding genes are initiated with ATG except for COX1, which begin with GTG instead. Meanwhile, the termination codons of 13 protein-coding genes are varied with TAA, TAG, TA, T or AGG. The measure of complete mitogenome sequence of S. barcoo will provide fundamental data for the phylogenetic and biogeographic studies of the Terapontidae. PMID:25799351

  13. Metazoan parasites of Geophagus brasiliensis (Perciformes: Cichlidae) in Patos Lagoon, extreme south of Brazil.

    PubMed

    Rassier, Gabriela Lopes; Pesenti, Tatiana Cheuiche; Pereira Júnior, Joaber; da Silva, Diego Silva; Wendt, Emília Welter; Monteiro, Cassandra de Moraes; Berne, Maria Elizabeth Aires

    2015-01-01

    This study has evaluated the parasitic fauna of 79 pearl cichlids (Geophagus brasiliensis) from the estuary of Patos Lagoon (31° 57' S and 52° 06' W), Rio Grande do Sul, Brazil, during the months of May and June in 2011 and 2012. All the hosts analyzed were infected with at least one species of parasite. A total of eleven metazoa were identified in 459 specimens collected. The trematode Austrodiplostomum compactum (34.2%) and ergasilids Ergasilus lizae (32.9%) and Gauchergasilus lizae (32.9%) were the most prevalent species. The trematodes Thometrema overstreeti and Posthodiplostomum sp. had significantly higher prevalence in fish longer than 20 cm. The sex of the host had no effect on parasite prevalence and abundance. Pearl cichlids are registered as a new host for the trematodes Lobatostoma sp., Homalometron pseudopallidum and Thometrema overstreeti, for the ergasilids Ergasilus lizae and Gauchergasilus euripedesi and for the argulid Argulus spinolosus. The crustacean E. lizae is recorded in Rio Grande do Sul for the first time. PMID:26648010

  14. DNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)

    PubMed Central

    Mat Jaafar, Tun Nurul Aimi; Taylor, Martin I.; Mohd Nor, Siti Azizah; de Bruyn, Mark; Carvalho, Gary R.

    2012-01-01

    Background DNA barcodes, typically focusing on the cytochrome oxidase I gene (COI) in many animals, have been used widely as a species-identification tool. The ability of DNA barcoding to distinguish species from a range of taxa and to reveal cryptic species has been well documented. Despite the wealth of DNA barcode data for fish from many temperate regions, there are relatively few available from the Southeast Asian region. Here, we target the marine fish Family Carangidae, one of the most commercially-important families from the Indo-Malay Archipelago (IMA), to produce an initial reference DNA barcode library. Methodology/Principal Findings Here, a 652 bp region of COI was sequenced for 723 individuals from 36 putative species of Family Carangidae distributed within IMA waters. Within the newly-generated dataset, three described species exhibited conspecific divergences up to ten times greater (4.32–4.82%) than mean estimates (0.24–0.39%), indicating a discrepancy with assigned morphological taxonomic identification, and the existence of cryptic species. Variability of the mitochondrial DNA COI region was compared within and among species to evaluate the COI region's suitability for species identification. The trend in range of mean K2P distances observed was generally in accordance with expectations based on taxonomic hierarchy: 0% to 4.82% between individuals within species, 0% to 16.4% between species within genera, and 8.64% to 25.39% between genera within families. The average Kimura 2-parameter (K2P) distance between individuals, between species within genera, and between genera within family were 0.37%, 10.53% and 16.56%, respectively. All described species formed monophyletic clusters in the Neighbour-joining phylogenetic tree, although three species representing complexes of six potential cryptic species were detected in Indo-Malay Carangidae; Atule mate, Selar crumenophthalmus and Seriolina nigrofasciata. Conclusion/Significance This study confirms that COI is an effective tool for species identification of Carangidae from the IMA. There were moderate levels of cryptic diversity among putative species within the central IMA. However, to explain the hypothesis of species richness in the IMA, it is necessary to sample the whole family across their broad geographic range. Such insights are helpful not only to document mechanisms driving diversification and recruitment in Carangidae, but also to provide a scientific framework for management strategies and conservation of commercially-important fisheries resources. PMID:23209586

  15. The complete validated mitochondrial genome of the silver gemfish Rexea solandri (Cuvier, 1832) (Perciformes, Gempylidae).

    PubMed

    Bustamante, Carlos; Ovenden, Jennifer R

    2016-01-01

    The silver gemfish Rexea solandri is an important economic resource but Vulnerable to overfishing in Australian waters. The complete mitochondrial genome sequence is described from 1.6 million reads obtained via next generation sequencing. The total length of the mitogenome is 16,350 bp comprising 2 rRNA, 13 protein-coding genes, 22 tRNA and 2 non-coding regions. The mitogenome sequence was validated against sequences of PCR fragments and BLAST queries of Genbank. Gene order was equivalent to that found in marine fishes. PMID:24621221

  16. The complete mitochondrial genome of the amoy croaker Argyrosomus amoyensis (Perciformes, Sciaenidae).

    PubMed

    Yang, Huirong; Zhao, Huihong; Sun, Jijia; Yang, Zituo; Xiao, Shibin; Li, Guifeng; Liu, Li

    2016-01-01

    We present the complete mitochondrial genome of Argyrosomus amoyensis in this study. The mitochondrial genome is 16,490 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. All of them are encoded on the heavy strand except ND6 and 8 tRNA genes on the light strand. The nucleotide compositions of the light strand are 31.02% of G, 26.96% of T, 25.31% of A and 16.71% of C. All the protein-coding genes begin with ATG initiation codon, and 5 types of inferred termination codons are AGA (COXI), T (COXII, ND3, ND4, Cytb), TA (ND2, COXIII), TAA (ATP8, ATP6, ND4L, ND5, ND6) and TAG (ND1). There are 11 intergenic spacers, 7 gene overlaps and no tandem repeat sequence. Gene arrangement and distribution are consistent with the typical vertebrates. PMID:25187261

  17. Paranthias furcifer (Perciformes: Serranidae), a new alien fish in the Mediterranean Sea.

    PubMed

    Dulčić, J; Dragičević, B

    2013-01-01

    A specimen of a creole fish Paranthias furcifer (285 mm total length) was captured in Marina Bay (Croatian coast) in the eastern Adriatic Sea. This is the first Mediterranean record of this species. The possible modes of introduction of species are discussed. PMID:23331154

  18. Fine structure of spermatozoa in the common pandora (Pagellus erythrinus Linnaeus, 1758) (Perciformes, Sparidae).

    PubMed

    Maricchiolo, G; Genovese, L; Laurà, R; Micale, V; Muglia, U

    2004-10-01

    Scanning and transmission electron microscopy were used to investigate the fine structure of the sperm of the Sparid fish Pagellus erythrinus L. The spermatozoon of pandora has a spherical head lacking an acrosome, a cone-shaped midpiece and a long tail. The midpiece houses a single mitochondrion. The centriolar complex lies inside the nuclear fossa and is composed of a proximal and a distal centriole which are arranged at right angles to each other. The flagellum is inserted medio-laterally into the head, contains the conventional 9+2 axoneme and possesses one pair of lateral fins. On the basis of its ultrastructural organization, the pandora sperm can be regarded as an evolved form of the primitive spermatozoon found in Teleosts. According to the morphological classification proposed by Mattei (1970), the sperm of pandora belongs to a "type I" designation, like that of the other Sparid fish. PMID:15375767

  19. Chelidoperca stella, a new species of perchlet (Perciformes: Serranidae) from the Andaman Sea, eastern Indian Ocean.

    PubMed

    Matsunuma, Mizuki; Motomura, Hiroyuki

    2016-01-01

    A new species of serranid fish, Chelidoperca stella, is described on the basis of five specimens from the Andaman Sea in the eastern Indian Ocean. The species can be readily distinguished from all valid congeners by having fewer pored lateral-line scales (34 or 35 vs. 40-45 in the latter) and the pelvic fin white with several small yellow spots (vs. spots absent). The species is also characterized by having relatively high counts of small serrae on the posterior margins of the preopercle (33-43 serrae), interopercle (7-10) and subopercle (18-28), despite the small body size (51.7-61.8 mm SL). Although Chelidoperca stella resembles C. margaritifera in having 2.5 scale rows between lateral line and the sixth dorsal-fin spine base, a relatively wider interorbital region, and the interorbital scales not reaching a vertical through the orbit anterior margin, but differs by having the above-mentioned diagnostic characters plus a slightly shorter longest anal-fin soft ray [17.4-18.7 (mean 18.1) % SL vs. 22.6-26.4 (24.4) % SL in C. margaritifera]. PMID:27394461

  20. Monorchiids (Platyhelminthes: Digenea) of chaetodontid fishes (Perciformes): biogeographical patterns in the tropical Indo-West Pacific.

    PubMed

    McNamara, M K A; Adlard, R D; Bray, R A; Sasal, P; Cribb, T H

    2012-06-01

    Species richness and biogeography of the monorchiid genus Hurleytrematoides was studied by the examination of 2834 individuals of 45 species of Chaetodontidae at six major sites in the tropical Indo-West Pacific: Heron Island, Lizard Island, Ningaloo (Western Australia), Palau, New Caledonia and Moorea (French Polynesia). In total, 18 species were distributed among six sites; descriptions are provided for eight new species: H. boucheti n. sp., H. combesi n. sp., H. deblocki n. sp., H. dollfusi n. sp., H. euzeti n. sp., H. kulbickii n. sp., H. pasteuri n. sp., and H. planesi n. sp. Overall richness ranged from zero to five Hurleytrematoides species per chaetodontid species. Seven Hurleytrematoides species were found at only one locality and eleven were found at multiple localities. Only one species, H. morandi, was found at all localities. Individual localities had between six (Moorea) and 10 (Heron Island) species; we attribute Moorea's depauperate parasite fauna to its isolation and distance from the Indo-Philippine centre of biological diversity. Using cluster analysis of 18 species of Hurleytrematoides and 45 species of chaetodontids sampled in the Indo-West Pacific, we show that the localities on the Great Barrier Reef (Heron Island and Lizard Island) and New Caledonia have the most similar chaetodontid and parasite fauna of any locality pairs. Cluster analysis results also show that the similarity of the chaetodontid assemblages at five of the six localities is relatively high and that Ningaloo has the most distinct fauna. Similarity values based on sharing of species of Hurleytrematoides are generally lower than those for their hosts; Moorea, Ningaloo and Palau all have low similarity to New Caledonia and Great Barrier Reef sites. We attribute these distinctions to the differential dispersal capability of the fish and their parasites. Chaetodontids have long-lived mobile pelagic larvae, the dispersal of which would be most affected by prominent biogeographical barriers, such as that between the Indian and Pacific Oceans. In contrast, monorchiids have no obvious dispersal stage, and vast distances have the capacity to act as effective barriers to dispersal. We conclude that the present distributions of species of Hurleytrematoides in the Indo-Pacific are driven by historical opportunity and capacity to disperse, and that some disjunct distributions are sculpted by stochasticity. PMID:22154425

  1. [Reproductive biology of Anisotremus interruptus (Perciformes: Haemulidae) in the Mexican Central Pacific].

    PubMed

    Ruiz-Ramírez, Salvador; Lucano-Ramírez, Gabriela; González-Sansón, Gaspar; Rojo-Vázquez, J A; Arellano-Martínez, Marcial

    2012-06-01

    Anisotremus interruptus is a widely distributed and commercially important species in the Eastern Pacific. A multi-year research on the reproduction of this species was carried out in coastal waters of Jalisco, Mexico. For this purpose, monthly samples were gathered with gillnets of different mesh sizes from 1998-2008. A total of 1090 individuals were collected with a total length range between 15.6-61.0cm. Significant differences from expected 1:1 ratio were found for sex ratios in the total sample and for each size class, but not when comparisons among months and years were done. Temporal variations of the gonadosomatic index and proportions of maturation stages suggest that the main reproductive period is from February to May, although some less intensive spawning events were observed in other months. Seven stages of oocytes development were identified. Oocytes in different stages of development were identified in ovaries classified as mature, suggesting an asynchronic type of gonad development. Mean maturation length (L50) was 31.0 for females and 29.7cm for males. The internal organization of testes is of lobular type. PMID:23894940

  2. Life history of the symbiotically luminous cardinalfish Siphamia tubifer (Perciformes: Apogonidae).

    PubMed

    Gould, A L; Dougan, K E; Koenigbauer, S T; Dunlap, P V

    2016-08-01

    Characteristics of the life history of the coral reef-dwelling cardinalfish Siphamia tubifer, from Okinawa, Japan, were defined. A paternal mouthbrooder, S. tubifer, is unusual in forming a bioluminescent symbiosis with Photobacterium mandapamensis. The examined S. tubifer (n = 1273) ranged in size from 9·5 to 43·5 mm standard length (LS ), and the minimum size at sexual maturity was 22 mm LS . The number of S. tubifer associated during the day among the spines of host urchins was 22·9 ± 16·1 (mean ± s.d.; Diadema setosum) and 3·6 ± 3·2 (Echinothrix calamaris). Diet consisted primarily of crustacean zooplankton. Batch fecundity (number of eggs; FB ) was related to LS by the equations: males (fertilized eggs) FB  = 27·5LS  - 189·46; females (eggs) FB  = 31·3LS  - 392·63. Individual mass (M; g) as a function of LS was described by the equation: M=9·74×10-5LS2·68. Growth, determined from otolith microstructure analysis, was described with the von Bertalanffy growth function with the following coefficients: L∞  = 40·8 mm LS , K = 0·026 day(-1) and t0  = 23·25 days. Planktonic larval duration was estimated to be 30 days. The age of the oldest examined individual was 240 days. The light organ of S. tubifer, which harbours the symbiotic population of P. mandapamensis, increased linearly in diameter as S. tubifer LS increased, and the bacterial population increased logarithmically with S. tubifer LS . These characteristics indicate that once settled, S. tubifer grows quickly, reproduces early and typically survives much less than 1 year in Okinawa. These characteristics are generally similar to other small reef fishes but they indicate that S. tubifer experiences higher mortality. PMID:27329350

  3. Characterization of the complete mitochondrial genome of Sickle pomfret Taractichthys steindachneri (Perciformes: Bramidae).

    PubMed

    Li, Weiwen; Tian, Siquan; Zhu, Jiangfeng; Wu, Feng; Wang, Kun; Dai, Xiaojie

    2016-09-01

    The complete mitogenome sequence of Taractichthys steindachneri was sequenced and analyzed in this study. The complete mitogenome of T. steindachneri is 16 723 bp in length, which contains 22 transfer RNAs, 2 ribosomal RNAs, 13 protein-coding genes and 2 non-coding region, a rep region and a control region (D-loop). This study will be useful for studying on the molecular systematic, taxonomic status and conservation genetics. PMID:26258504

  4. The complete mitochondrial genome of Protomelas annectens (Regan, 1922) (Perciformes: Cichlidae).

    PubMed

    Wang, Lei; Li, Zhongpu; Chen, Zaizhong; Leng, Xiangjun; Zhao, Yuming; Gao, Jianzhong; Chen, Xiaowu

    2016-09-01

    In this study, the complete mitogenome sequence of Protomelas annectens Regan 1922 has been sequenced by next-generation sequencing method. The assembled mitogenome consisting of 16 583 bp, includes 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and 1 control region. The overall base composition of P. annectens is 27.41% for A, 30.07% for C, 15.88% for G, 26.64% for T and shows 94% identity to threadfin cichlid, Petrochromis trewavasae. These data will provide useful molecular information for phylogenetic relationships within the family Cichlidae species. PMID:26358538

  5. The complete mitochondrial genome of pike-perch, Sander lucioperca (Perciformes: Percidae).

    PubMed

    Ma, Zhihong; Bercsenyi, Miklos; Yang, Xuefen; Wei, Kaijian; Yang, Ruibin

    2016-09-01

    The complete mitochondrial genome of Sander lucioperca has been sequenced and analyzed in this study. It was a circular double-stranded DNA molecule of 16,541 base pairs (bp) in length and exhibited 37 typical animal mitochondrial genes. The gene order and base composition were similar to those of other percid species. All protein-coding genes were initiated with ATG except for COX 1, which began with GTG instead. However, the termination codons of 13 protein-coding genes varied with TAG, TAA, TA or T. Within CR, we detected five copies of 10 bp tandemly repeated sequences domain, which immediately followed the tRNA(Pro). These mitogenome sequence data would contribute to better understanding phylogenetic relationships and population genetics of the family Percidae. PMID:25758047

  6. A new species of Percina (Perciformes: Percidae) from the Apalachicola River drainage, southeastern United States

    USGS Publications Warehouse

    Freeman, Mary C.; Freeman, B.J.; Burkhead, N.M.; Straight, C.A.

    2008-01-01

    Percina crypta, the Halloween Darter, is described as a new species endemic to the Chattahoochee and Flint River systems in Georgia and Alabama. Percina crypta differs from sympatric Percina nigrofasciata in having narrowly separated dorsal saddles (inter-saddle spaces typically less than or equal to saddle width, compared to frequently wider than saddle width in P. nigrofasciata), in usually possessing a single modified scale between the pelvic bases (compared to two or more in P. nigrofasciata), and in having dark wide bands on pectoral-fin rays (versus pectoral fin clear, or with irregular dark marks or weak tessellations on fin rays in P. nigrofasciata). Phylogenetic relationships of P. crypta to other species of Percina are obscure. Percina crypta occurs in shoal and riffle habitats in the Chattahoochee and Flint River mainstems and in a few tributary systems, with the known extant range comprising four disjunct areas separated by mainstem impoundments and altered river reaches.

  7. Growth and mortality rates of bigeye tuna Thunnus obesus (Perciformes: Scombridae) in the central Atlantic Ocean.

    PubMed

    Zhu, Guoping; Xu, Liuxiong; Zhou, Yingqi; Chen, Xinjun

    2009-01-01

    Age and growth parameters were estimated for bigeye tuna Thunnus obesus Lowe, 1839 sampled from China longline fisheries in the central Atlantic Ocean from October 2002 to July 2003 and from August 2004 to March 2005. The von Bertalanffy growth parameters were estimated at L(infinity)=217.9 cm fork length, k=0.23 year(-1), and t(0)=-0.44 year. The total mortality rate (Z) was estimated to be from 0.82 to 1.02, the fishing mortality (F) and the natural mortality were 0.54 year(-1) and 0.39 year(-1), respectively. The exploitation ratio (E) was 0.35. This study provides the detailed estimates of growth and mortality rate for bigeye tuna in the central Atlantic Ocean, which can be used as biological input parameters in further stock evaluations in this region. However, age analysis, additional validation of the size composition and stock structure are needed for future studies. PMID:19637690

  8. Origin, diversification, and historical biogeography of the genus Trachurus (Perciformes: Carangidae).

    PubMed

    Cárdenas, Leyla; Hernández, Cristián E; Poulin, Elie; Magoulas, Antonios; Kornfield, Irv; Ojeda, F Patricio

    2005-05-01

    We addressed phylogenetic relationships in the genus Trachurus using cytochrome b gene and D-loop sequences. The trees showed five groups: (1) the Southwest Pacific species (T. japonicus, T. novaezelandiae, and T. declivis); (2) The Mediterranean Sea and Eastern Atlantic species (T. mediterraneus); (3) The Atlantic Ocean species (T. lathami and T. trecae); (4) Eastern Atlantic species (T. trachurus and T. capensis); and (5) a group of highly mobile pelagic species, two from the Eastern Pacific (T. symmetricus and T. murphyi) and one from the Eastern Atlantic (T. picturatus). The phylogeny based on Cyt b, supports the molecular clock hypothesis and our results agree with the reported fossil indicating that the origin of this genus occur when the Thetys Sea closed (around 18.4 MYA). In addition, a very slow neutral substitution rate is reported identified only two periods of maximum diversification: the first occurring between 18.4 and 15.0 MYA and the second between 8.4 MYA and present day. PMID:15804418

  9. Complete mitochondrial genome of the bigeye scad Selar crumenophthalmus (Perciformes: Carangidae).

    PubMed

    Li, Min; Chen, Zuozhi; Zou, Keshu

    2016-01-01

    The bigeye scad (Selar crumenophthalmus) is a widely distributed pelagic fish species with highly commercial values. Little information was available about its genetic characteristics. In the present study, we determined the complete mitochondrial genome of S. crumenophthalmus by combining sequences of overlapped fragments amplified by PCR using primers designed for Carangidae species. The entire sequence was 16,610 bp in length, which included a standard set of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions (the control region and the origin of light strand replication). The genome was composed of 27.2% A, 29.5% C, 26.5% T and 16.8% G, showing an obvious anti G bias commonly observed in teleosts. The complete mitogenome sequence of S. crumenophthalmus could contribute for the studies on phylogenetics, population structure and for developing fisheries management strategies. PMID:24660925

  10. Immune adaptive response induced by Bicotylophora trachinoti (Monogenea: Diclidophoridae) infestation in pompano Trachinotus marginatus (Perciformes: Carangidae).

    PubMed

    Chaves, I S; Luvizzotto-Santos, R; Sampaio, L A N; Bianchini, A; Martínez, P E

    2006-09-01

    Fish have developed protective strategies against monogeneans through immunological responses. In this study, immune adaptive response to parasites was analysed in the pompano Trachinotus marginatus infested by Bicotylophora trachinoti. Hosts were pre-treated with formalin and after 10 days assigned to one of the following experimental treatments: (1) fish infested with remaining eggs of B. trachinoti; (2) fish infested with remaining eggs of B. trachinoti and experimentally re-infested by exposure to T. marginatus heavily infested with B. trachinoti. Samples were collected at 0, 15, and 30 days. Gills were dissected to check the presence of B. trachinoti. Blood was collected for haematological and biochemical assays. Spleen and head-kidney were dissected for phagocytosis assay. The spleen-somatic index was also calculated. Re-infested fish showed a faster and higher parasite infestation than infested ones. The parasite mean abundance at 15 days was 24.86+/-13.32 and 11.67+/-8.57 for re-infested and infested fish, respectively. In both groups, hosts showed an immune adaptive response to parasite infestation that was marked by an increased number of leukocytes. Also, phagocytosis (%) in spleen and head-kidney cells was stimulated after parasite infestation (92.50+/-3.73 and 66.00+/-9.54, respectively), becoming later depressed (77.39+/-6.69 and 53.23+/-9.14, respectively). These results support the hypothesis that monogenean infestation induces a biphasic response of the non-specific defence mechanisms in the pompano T. marginatus. This response is marked by an initial stimulation followed by a later depression of the non-specific defence mechanisms. PMID:16483796

  11. First records of the blue runner Caranx crysos (Perciformes: Carangidae) in Newfoundland waters.

    PubMed

    Devine, B M; Fisher, J A D

    2014-08-01

    From August to September 2013, c. 21 specimens of the blue runner Caranx crysos were caught by commercial fishermen in two locations off the south coast of Newfoundland, Canada. These samples represent the first records of C. crysos in Newfoundland waters, and a potential northward range expansion of this species in the north-western Atlantic Ocean. They also illustrate the importance of fisher-derived sampling that spans times and locations outside of the limited range targeted by scientific surveys in this region. PMID:24976132

  12. Description of the mitochondrial genome of yellowtail scad Atule mate (Perciformes: Carangidae).

    PubMed

    Li, Min; Li, Yufang; Chen, Zuozhi

    2016-05-01

    The yellowtail scad Atule mate is an economic fish species distributed throughout the tropical and subtropical oceans of the Indo-Pacific region. In the present study, we assembled the complete mitochondrial genome of A. mate from contiguous, overlapping segments amplified by PCR. The mitogenome sequence was 16,565 bp in length, consisting of 37 typical animal mitochondrial genes and 1 control region, same with the typical vertebrate mitochondrial gene arrangement. The overall base composition of the heavy strand was 28.4% for A, 27.6% for T, 16.3% for G, and 27.7% for C. Phylogenetic analyses using the protein-coding gene sequences reveal that genus Atule was most closely related to Alepes. PMID:25423509

  13. Characterization of the mitochondrial genome of the Shortfin scad Decapterus macrosoma (Perciformes: Carangidae).

    PubMed

    Li, Min; Zhang, Peng; Sun, Dianrong; Chen, Tao; Fan, Jiangtao; Zou, Keshu; Chen, Zuozhi

    2016-01-01

    The complete mitochondrial genome sequence of Decapterus macrosoma has been obtained with overlapped polymerase chain reaction. The genome was 16,545 bp in length which contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and 2 non-coding regions (the control region and the light strand replication origin). Gene organization was similar to that observed in most other vertebrates. With the exception of the ND6 and eight tRNA genes, all other genes were encoded on the heavy strand. The genome was composed of 27.0% A, 30.4% C, 25.4% T and 17.2% G, showing an obvious anti-G bias commonly observed in teleosts. Two termination-associated sequence regions (TAS-1 and TAS-2), three central conserved sequence blocks (CSB-F, CSB-E and CSB-D), and three conserved sequence blocks (CSB-1, CSB-2 and CSB-3) were identified within the control region. The sequence data of D. macrosoma could provide useful information for the studies on molecular systematics and population genetics. PMID:24438243

  14. Metazoan parasites of blue jack mackerel Trachurus picturatus (Perciformes: Carangidae) from Portuguese mainland waters.

    PubMed

    Hermida, M; Pereira, A; Correia, A T; Cruz, C; Saraiva, A

    2016-07-01

    Blue jack mackerel, Trachurus picturatus, is a carangid fish which constitutes an important commercial resource in the north-east Atlantic. Its metazoan parasite community from Portuguese mainland waters was investigated here for the first time. Nine parasite taxa were found, most of which are common parasites of Trachurus spp. The parasite community was broadly similar to that of the Atlantic horse mackerel, T. trachurus, from the same region, but two digenean species were detected in blue jack mackerel, Monascus filiformis and Tergestia sp., which did not occur in horse mackerel from this region. A comparison with the two previous studies of T. picturatus parasite communities shows that continental-shelf regions are characterized by higher prevalences of digenean trematodes and an absence of trypanorhynch cestodes, in contrast with oceanic regions. PMID:26121918

  15. Mitochondrial genome of the Torpedo scad Megalaspis cordyla (Perciformes: Carangidae): genome characterization and phylogenetic consideration.

    PubMed

    Li, Min; Li, Yufang; Chen, Zuozhi

    2016-05-01

    This study presented the complete mitochondrial genome of the Torpedo scad Megalaspis cordyla, the only member of its genus, as well as its phylogenetic position in Carangidae. The genome is 16,566 bp containing the usual 2 rRNA genes, 13 protein-coding genes, 22 tRNA genes, and 1 control region. Gene organization is similar to that observed in most other vertebrates. Gene overlapping and separating were also observed in M. cordyla mitogenome. The overall base compositions of mitogenome was 28.83% A, 25.81% T, 15.93% G, and 29.43% C. Phylogenetic analyses using the concatenated sequence of the protein-coding genes of the reported Carangidae mitogenome showed similar results in the neighbour-joining and Bayesian inference trees. Three clades were formed as Subfamilies Caranginae, Seriolinae and Trachinotinae in Carangidae. M. cordyla was most closely related to the species in genus Caranx. PMID:25319290

  16. Fecundity, growth, and survival of the angelfish Pterophyllum scalare (Perciformes: Cichlidae) under laboratory conditions.

    PubMed

    Ortega-Salas, Armando A; Cortés G, Isabel; Reyes-Bustamante, Hugo

    2009-09-01

    The freshwater angelfishes (Pterophyllum) are South American cichlids that have become very popular among aquarists, yet scarce information on their culture and aquarium husbandry exists. We studied Pterophyllum scalare to analyze dietary effects on fecundity, growth, and survival of eggs and larvae during 135 days. Three diets were used: A) decapsulated cysts of Artemia, B) commercial dry fish food, and C) a mix diet of the rotifer Brachionus plicatilis and the cladoceran Daphnia magna. The initial larval density was 100 organisms in each 40 L aquarium. With diet A, larvae reached a maximum weight of 3.80 g, a total length of 6.3 cm, and a height of 5.8 cm; with diet B: 2.80 g, 4.81 cm, and 4.79 cm, and with diet C: 3.00 g, 5.15 cm, and 5.10 cm, respectively. Significant differences were observed between diet A, and diet B and C, but no significantly differences were observed between diets B and C. Fecundity varied from 234 to 1,082 eggs in 20 and 50 g females, respectively. Egg survival ranged from 87.4% up to 100%, and larvae survival (80 larvae/40 L aquarium) from 50% to 66.3% using diet B and A, respectively. Live food was better for growing fish than the commercial balanced food diet. Fecundity and survival are important factors in planning a good production of angelfish. PMID:19928467

  17. Rebuttal to Koeda et al. (2014) on the Red Sea fishes of the perciform genus Pempheris.

    PubMed

    Randall, John E; Victor, Benjamin C; Alpermann, Tilman J; Bogorodsky, Sergey V; Mal, Ahmad O; Satapoomin, Ukkrit; Bineesh, K K

    2014-01-01

    Koeda et al. (2014) published a review of fishes of the genus Pempheris of the Red Sea. They concluded that there are four species: P. adusta Bleeker, P. mangula Cuvier, P. nesogallica Cuvier, and a new species, P. tominagai. We show that the first three species they cite are not present in the Red Sea, as follows. 1) P. adusta is a western Pacific species (type locality Ambon), described only from the holotype, and without a dark border on the anal fin. Koeda et al. (2014) mistakenly apply that name to P. flavicycla which is a widespread Indian Ocean species characterized by a prominent broad black border along the anal fin. Koeda et al. (2014) also redescribe P. adusta, using Indian Ocean specimens of P. flavicycla, despite the coloration difference and a 2.5% difference in the mtDNA sequence (COI) between Indian Ocean and W. Pacific populations. 2) P. mangula is a species from the east coast of India (type locality Visakhapatnam), clearly distinct in both gill-raker counts and a 1.1% sequence divergence in COI from its Red Sea relative P. rhomboidea. Pempheris mangula is not found west of India, and Koeda et al. (2014) mistakenly use DNA from Oman and Madagascar to represent P. mangula, instead of genetic material available from the type locality. 3) Pempheris nesogallica (type locality Mauritius) is unknown from the Red Sea. Koeda et al. (2014) separate P. nesogallica from P. rhomboidea (their "P. mangula") by eye size; we fail to find any difference (and they use their purported eye-size difference to erroneously rename one of the two syntypes of P. nesogallica as "P. mangula"). 4) Their new species P. tominagai is referred to as the Indian Ocean sister species of "P. schwenkii of the Pacific"; however, the type locality of P. schwenkii is the Batu Islands off the SW coast of Sumatra in the Indian Ocean. They mistakenly include specimens of a distant South African species as paratypes of P. tominagai. We have determined that P. tominagai is a valid species endemic to the Red Sea and Gulf of Aden. They misidentify one lot of P. rhomboidea in the collection of the Hebrew University of Jerusalem as their record of P. nesogallica from the Red Sea. They misidentify the specimen in their photograph of Fig. 1B as P. adusta and use it as material for their redescription of the species, but it is now shown to be a paratype of Pempheris bexillon Mooi & Randall, 2014. Additionally, they regard P. malabarica Cuvier as a junior synonym of P. molucca Cuvier, but the name P. molucca is based on a fanciful painting and is unavailable as a nomen dubium. They treat Pempheris russellii Day as a junior synonym of P. mangula; however, it is distinct in having longer pectoral fins, a larger eye, and more gill rakers. Their key to the species of Pempheris of the Red Sea is incorrect. We present a new key and conclude that only three species of Pempheris are presently known from the Red Sea: P. flavicycla, P. rhomboidea, and P. tominagai. PMID:25543938

  18. The complete mitogenome of the Chinese bahaba Bahaba taipingensis (Perciformes: Sciaenidae).

    PubMed

    Zhao, Linlin; Gao, Tianxiang; Lu, Weihua; Lu, Ningning; Li, Yongzhen; Zhang, Zhaohui

    2012-12-01

    In this study, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba was determined by long PCR and primer walking methods. The complete mitochondrial genome is 16,500 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes) as well as a control region (CR) as other bony fishes. Within the CR, we identified the extended termination-associated sequence domain, the central conserved sequence block domains (CSB-D, CSB-E and CSB-F) and the conserved sequence block domains (CSB-1, CSB-2 and CSB-3). PMID:22943194

  19. Tucunarella n. Gen. and other dactylogyrids (Monogenoidea) from cichlid fish (Perciformes) from Peruvian Amazonia.

    PubMed

    Mendoza-Franco, Edgar F; Scholz, T; Rozkosná, P

    2010-06-01

    During parasitological research on cichlid fish from the tributaries of the Amazon River around Iquitos, Peru, the following gill monogenoidean species were found: Tucunarella cichlae n. gen. and n. sp. from Cichla monoculus Spix and Agassiz; Gussevia alioides Kritsky, Thatcher, and Boeger, 1986 from Heros severus Heckel; Gussevia asota Kritsky, Thatcher, and Boeger, 1989 from Astronotus ocellatus (Agassiz); Gussevia disparoides Kritsky, Thatcher, and Boeger, 1986 from H. severus (all new geographical records) and Cichlasoma amazonarum Kullander (new host record); Gussevia longihaptor (Mizelle and Kritsky, 1969) Kritsky, Thatcher, and Boeger, 1986 and Gussevia undulata Kritsky, Thatcher, and Boeger, 1986 from C. monoculus ; Sciadicleithrum satanopercae Yamada, Takemoto, Bellay, and Pavanelli, 2008 from Satanoperca jurupari Heckel; and Sciadicleithrum variabilum (Mizelle and Kritsky, 1969) Kritsky, Thatcher, and Boeger, 1989 from C. amazonarum (new host and geographical records). Tucunarella n. gen. is proposed to accommodate a new species, Tucunarella cichlae , which is its type and only known species in the genus. The new genus is characterized by, besides a very large body size (about 1.5 mm vs. much less than 1 mm in other ancyrocephaline genera in Amazonia), a thickened tegument, 1 pair of eyes, overlapping gonads (testis dorsal to the germarium), nonarticulated male copulatory organ (MCO) and accessory piece, a coiled (counterclockwise) MCO, a dextral vaginal aperture, a haptor armed with 2 pairs of anchors (each with broad base and subequal roots, which are marginally folded), and dorsal and ventral bars and 14 hooks with protruding blunt thumbs and 2 different shapes (slender vs. slightly expanded shanks). Illustrations and data on morphological and biometric variability of individual species from different hosts are provided. The present data provide evidence of a relatively wide host specificity of gill monogenoideans parasitic in South American cichlids. PMID:20557192

  20. Genetic characterization of native and invasive Plagioscion squamosissimus (Perciformes, Sciaenidae) populations in Brazilian hydrographic basins.

    PubMed

    Panarari-Antunes, R S; Prioli, A J; Prioli, S M A P; Júlio, H F; Oliveira, A V; Agostinho, C S; Silva Filho, J P; Prioli, L M

    2015-01-01

    The genetic diversity of invasive and native populations of Plagioscion squamosissimus (Heckel, 1840) from the Paraná, Parnaiba and Araguaia-Tocantins river basins was assessed by using Random Amplified Polymorphic DNA (RAPD) markers. Genetic data confirmed the hypothesis of low genetic variability within and among P. squamosissimus populations introduced in the upper Paraná River basin, and indicated that they likely originated from a common ancestor. Moreover, the data demonstrated that, in agreement with available historical records, the P. squamosissimus populations established in the Paraná River basin were derived from a population native to the Parnaíba River basin. The genetic data presented here are of potential future application for the management of the invasive P. squamosissimus populations and for the preservation of the genetic legacy of native fish. PMID:26600490

  1. A new species of the sandperch genus Parapercis from the western Indian Ocean (Perciformes: Pinguipedidae).

    PubMed

    Ho, Hsuan-Ching; Heemstra, Phillip C; Imamura, Hisashi

    2014-01-01

    Parapercis albiventer sp. nov., a new species of sandperch is described based on 12 specimens collected from the western Indian Ocean. It can be distinguished from congeners by having a bright white ventral surface, without color markings on lower fourth of body; dorsal surface of head and body densely covered by small brown spots; a row of 10 faint reddish blotches on a paler background, along body axis; row of 10 deep reddish blotches, the lower part of each blotch with a solid black bar ventrally, below mid-lateral body axis; and combination of following characters: no palatine teeth; snout long; eye small; interorbital space broad; dorsal-fin rays V, 21; anal-fin rays I, 17; pectoral-fin rays 16-17; pored lateral-line scales 55-59; predorsal scales 9 or 10; scales on transverse row 6/17-21; 3 pairs of canine teeth at front of lower jaw; and vertebrae 10 + 20 = 30. PMID:24871014

  2. Assessment of the dolphinfish Coryphaena hippurus (Perciformes: Coryphaenidae) fishery in Pacific Panama.

    PubMed

    Guzman, Héctor M; Díaz-Ferguson, Edgardo; Vega, Angel J; Robles, Yolany A

    2015-09-01

    The dolphinfish (Coryphaena hippunis) is a highly migratory pelagic species commercially exploited by industrial, artisanal and recreational fisheries in tropical and subtropical areas of the world's oceans. Herein, we evaluated the dolphinfish industrial fishery in Pacific Panama for the first time generating a growth model and examining fluctuations in annual total catch and in catch per unit effort (CPUE) over a four-year period (2006-2009). Annual and monthly catch values and biological parameters of 14913 individuals were obtained onboard industrial vessels, landing sites and records from processing plants. Size frequency for industrial vessels showed a normal distribution between 353 and 1,715 mm (average, 1010.85 mm; n = 10,459). Fish weight averaged 4.94 kg (SD). Sex ratio was slightly biased toward females. More than 90% of the analyzed fish were sexually mature. The length-weight relationship was positive and significant, reflecting allometric growth. Growth parameters using the von Bertalanffy equation revealed a growth efficiency of θ = 4.61, which is within the reported range for Coryphaena hippurus (3.95-4.70). The largest fish were between age classes 2 and 3 (700 - 1400 mm). Total catch per year and catch per unit effort (CPUE) per year fluctuated, with the highest values recorded between 2008 and 2009. Catch values reported herein are preliminary and appear to be below those recorded elsewhere in the region and cautiously may represent an indicator of sustainable use of this marine resource even considering the absence of management actions in Panama. PMID:26666127

  3. Systematics, biogeography, and evolution of the Neotropical peacock basses Cichla (Perciformes: Cichlidae).

    PubMed

    Willis, Stuart C; Nunes, Mario S; Montaña, Carmen G; Farias, Izeni P; Lovejoy, Nathan R

    2007-07-01

    To investigate forces influencing diversification in Neotropical fishes, the phylogenetic relationships among species and populations of the cichlid genus Cichla were examined. Mitochondrial DNA was sequenced for 454 individuals of the 5 nominal Cichla species and several putative undescribed species. Phylogenetic analyses support the distinction of two major clades of Cichla. Clade A includes C. temensis and two undescribed species from the lower Amazonas and Xingu Rivers. Clade B includes C. orinocensis, C. monoculus, C. ocellaris. C, intermedia, and an undescribed species from the upper Madeira River. Species boundaries were relatively well-circumscribed for clade B, while incomplete lineage sorting was inferred for clade A. Three probable instances of introgression were observed, including a regional population of C. orinocensis from the Negro River that shows a history of introgression. Biogeographic patterns from Cichla are partially congruent with those seen in several other Neotropical fish clades, and the diversification of Cichla species is inferred to result from both vicariance and sympatric divergence. PMID:17275345

  4. World-wide species distributions in the family Kyphosidae (Teleostei: Perciformes).

    PubMed

    Knudsen, Steen Wilhelm; Clements, Kendall D

    2016-08-01

    Sea chubs of the family Kyphosidae are major consumers of macroalgae on both temperate and tropical reefs, where they can comprise a significant proportion of fish biomass. However, the relationships and taxonomic status of sea chubs (including the junior synonyms Hermosilla, Kyphosus, Neoscorpis and Sectator) worldwide have long been problematical due to perceived lack of character differentiation, complicating ecological assessment. More recently, the situation has been further complicated by publication of conflicting taxonomic treatments. Here, we resolve the relationships, taxonomy and distribution of all known species of sea chubs through a combined analysis of partial fragments from mitochondrial markers (12s, 16s, cytb, tRNA -Pro, -Phe, -Thr and -Val) and three nuclear markers (rag1, rag2, tmo4c4). These new results provide independent evidence for the presence of several junior synonyms among Atlantic and Indo-Pacific taxa, demonstrating that several sea chub species are more widespread than previously thought. In particular, our results can reject the hypothesis of endemic species in the Atlantic Ocean. At a higher taxonomic level, our results shed light on the relationships between Girellidae, Kuhliidae, Kyphosidae, Microcanthidae, Oplegnathidae and Scorpididae, with Scorpididae resolved as the sister group to Kyphosidae. PMID:27143240

  5. The complete mitochondrial genome of the orange-spotted grouper Epinephelus coioides (Perciformes, Serranidae).

    PubMed

    Yang, Huirong; Xie, Zhenzhen; Li, Shuisheng; Wu, Xichao; Peng, Cheng; Zhang, Yong; Lin, Haoran

    2016-05-01

    We present the complete mitochondrial genome of Epinephelus coioides in this study. The mitochondrial genome is 16,458 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. All of them are encoded on the heavy strand except ND6 and 8 tRNA genes on the light strand. The nucleotide compositions of the light strand are 28.88% of G, 28.75% of T, 26.58% of A and 15.80% of C. All the protein-coding genes share ATG initiation codon except ATP6 with CTG and COXI with GTG, and four types of inferred termination codons are T (ND2, COXII, ND3, ND4 and Cytb), TA (COXIII), TAA (ND1, ATP8, ND4L, ND5, ATP6 and COXI) and TAG (ND6). There are 10 intergenic spacers, 5 gene overlaps and no tandem repeat sequence. Gene arrangement and distribution are consistent with the typical vertebrates. PMID:25211085

  6. Complete mitochondrial genome and phylogenic analysis of the mudskipper Scartelaos gigas (Perciformes, Gobiidae).

    PubMed

    Li, Zhe; Zhang, Yuting; Chen, Shixi; Chen, Wei; Hong, Wanshu

    2016-09-01

    In this paper, the complete mitochondrial genome sequence of Scartelaos gigas was firstly determined. The circular genome (16 717 bp) comprises 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 control region. The overall base composition of S. gigas is 28.9% for C, 28.3% for A, 26.4% for T, 16.4% for G, with a slight A + T bias of 54.7%. In the control region, the termination-associated sequence and conserved sequence block domains were found, but the tandem repeat structure was not found. It has the typical vertebrate mitochondrial gene arrangement. The phylogenic analysis using the Neighbor-Joining method showed that the fishes belonging to Gobiidae, Odontoburidae, and Eleotridae formed three branches grouped with other fishes into one clade which separated from the mammals. We hope that the results from the present study will provide useful molecular information for the further studies on genetic structure and demographic history of S. gigas. PMID:26436681

  7. Review of the harvestfishes, genus Peprilus (Perciformes: Stromateidae),
    of the Atlantic coast of South America.

    PubMed

    Marceniuk, Alexandre P; Caires, Rodrigo; Siccha-Ramirez, Raquel; Oliveira, Claudio

    2016-01-01

    Currently, seven valid species are recognized in the genus Peprilus. Found from United States to Argentina, Peprilus paru has a complex nomenclatural history, with seven junior synonyms, three from North America and four from South America. As there has been no recent research, it remains unclear whether species representatives in the north-south axis represent different populations of a single species or distinct species. By comparison of type specimens as well as a comprehensive collection of non-type specimens, this paper aims to clarify the taxonomic status of the nominal species listed as junior synonyms of Peprilus paru in the Atlantic side of South America. Based on morphological data and DNA barcoding, Peprilus crenulatus Cuvier, 1829 and P. xanthurus (Quoy & Gaimard, 1825) are resurrected, while Rhombus argentipinnis Cuvier, 1833 and Rhombus orbicularis Guichenot, 1866, are considered to be junior synonyms of P. crenulatus. PMID:27394588

  8. New complete mitochondrial genome of the Perccottus glenii (Perciformes, Odontobutidae): additional non-coding region.

    PubMed

    Chen, Xiaohui; Shi, Yangbai; Zhong, Liqiang; Wang, Minghua; Sun, Lihui; Yang, Guoliang

    2016-05-01

    Perccottus glenii is a species of freshwater sleeper native to the Russian Far East, north-eastern China, and the northern part of the Korean Penninsula with introduced populations in other regions of Eurasia. In this study, a new complete mitochondrial genome of Perccottus glenii was reported. The circular genome is 16,510 bp in length and consists of 13 protein-coding genes, 22 tRNA genes, 2 ribosomal RNA genes, and 1 control region. Except the origin of the light strand replication (OL), an additional non-coding region was present between ND6 and tRNA-Glu in the Light strand. The overall nucleotide composition was 30.5% A, 29.2% T, 24.4% C and 15.9% G, with an A + T bias of 59.7%. The gene composition and the structural arrangement of the P. glenii complete mtDNA were identical to most of the other vertebrates. The molecular data here we presented could play a useful role to study the evolutionary relationships and population genetics of Odontobutidae fish. PMID:25329281

  9. The complete mitochondrial genome of the blackspotted croaker Protonibea diacanthus (Perciformes, Sciaenidae).

    PubMed

    Liu, Li; Yang, Huirong; Yang, Zituo; Zhao, Huihong; Sun, Jijia; Xiao, Shibin; Yang, Xiankuan; Li, Guifeng

    2016-05-01

    We present the complete mitochondrial genome of Protonibea diacanthus in this study. The mitochondrial genome is 16,535 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. All of them are encoded on the heavy strand except ND6 and 8 tRNA genes on the light strand. The nucleotide compositions of the light strand are 31.09% of G, 27.54% of T, 25.34% of A and 16.03% of C. All the protein-coding genes start with ATG initiation codon except ATP6 with GTG, and 5 types of inferred termination codons are AGA (COXI and COXII), T (ND3, ND4, Cytb), TA (ND2, COXIII and ATP6), TAA (ND1, ATP8 and ND4L) and TAG (DN5 and ND6). There are 14 intergenic spacers and 7 gene overlaps. The tandem repeat sequence is observed in 12S-rRNA, 16S-rRNA, tRNA(Trp), tRNA(Ala), COXIII, ND4L and ND4 genes. Gene arrangement and distribution are consistent with the typical vertebrates. PMID:25211087

  10. Characterization of the complete mitochondrial genome of Seriolella porosa (Perciformes: Centrolophidae).

    PubMed

    Chen, Huanpu; Huang, Hai; Li, Jiantao; Zhao, Yuan; Deng, Siping; Li, Guangli; Huang, Hongxin; Zhu, Chunhua

    2016-05-01

    We have presented the complete mitochondrial genome of the Seriolella porosa in this study. The mitochondrial genome is 16,814 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a control region. The gene order and composition of Seriolella porosa mitochondrial genome was similar to those of most vertebrates. The nucleotide compositions of the light strand in descending order is 29.75% of T, 29.39% of G, 24.84% of A and 16.02% of C. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, all the other mitochondrial genes are encoded on the heavy strand. PMID:25484174

  11. Complete mitochondrial DNA sequence and phylogenic analysis of Oxyeleotris lineolatus (Perciformes, Eleotridae).

    PubMed

    Zang, Xue; Yin, Danqing; Wang, Ruoran; Yin, Shaowu; Tao, Panfeng; Chen, Jiawei; Zhang, Guosong

    2016-07-01

    In this study, the mitochondrial genome of Oxyeleotris lineolatus was first determined. The length of entire mtDNA sequence was 16,522 bp with (A + T) content of 53.81%, and it contained 13 protein-coding genes, two rRNAs, 22 tRNAs, and a control region. The gene order and the orientation are similar to some typical fish species. The data will provide useful molecular information for phylogenetic studies concerning O. lineolatus and its related species. PMID:26016879

  12. A new species of Tripartiella (Ciliophora: Trichodinidae) from Aequidens tetramerus (Perciformes: Cichlidae) in north Brazil.

    PubMed

    Martins, M L; Marchiori, N; Bittencourt, L S; Tavares-Dias, M

    2016-06-01

    A new species of Tripartiella is described from the gills of the wild saddle cichlid Aequidens tetramerus in north Brazil. Wet smears of skin and gills of examined fish were air-dried at room temperature and impregnated with Klein's dry silver method for examination of the adhesive disc's structures and denticles. Total prevalence of parasitism was 65%. This ciliate is characterized as a small-sized trichodinid, body diameter 37.03 ± 4.9 μm, adhesive disc 30.50 ± 2.71 μm, denticulate ring 13.28 ± 0.8 μm and 24 ± 2.0 denticles. Taxonomic and morphometric data for the new species are discussed. PMID:26934157

  13. Complete mitochondrial genome and phylogenic analysis of Odontobutis yaluensis, Perciformes, Odontobutidae.

    PubMed

    Zang, Xue; Wang, Xiaojun; Zhang, Guosong; Wang, Yayuan; Ding, Yandong; Yin, Shaowu

    2016-05-01

    The complete mitochondrial genome of Odontobutis yaluensis was sequenced as to be 16,909 bp in length with (A + T) content of 55.73%, and it contained 13 protein-coding genes, 2 rRNAs, 22 tRNAs and a control region. The gene order and orientation are similar to some typical fish species. The data will provide the useful molecular information for phylogenetic relationships of O. yaluensis with Odontobutis potamophila first clustered into a small branch, and then with Odontobutis platycephala clade, and finally with Odontobutis sinensis clade. Odontobutidae and Rhyacichthyidae formed the sister group, and Eleotridae and Gobiidae formed the sister group. PMID:25319281

  14. Wallaceochromis gen. nov, a new chromidotilapiine cichlid genus (Pisces: Perciformes) from West Africa.

    PubMed

    Lamboj, Anton; Trummer, Franziska; Metscher, Brian D

    2016-01-01

    A new genus, Wallaceochromis, is described for the chromidotilapiine cichlids of the Pelvicachromis humilis group. It differs from Pelvicachromis sensu stricto in the number and arrangement of tubular infraorbitals, a straighter and sloping dorsal head profile with a low supraoccipital crest, higher abdominal vertebral counts (14-15 vs. 13-14), and in displaying a pattern of vertical bars on the body in several behavioral situations. PMID:27470842

  15. Complete mitochondrial genome of copperband butterflyfish Chelmon rostratus (Teleostei, Perciformes, Chaetodontidae).

    PubMed

    Wang, Li-Juan; You, Feng; Wu, Zhi-Hao

    2016-05-01

    In this study, the complete mitochondrial (mt) genome of the copperband butterflyfish Chelmon rostratus from Beibu Bay, China, was determined. It is one of the most common coral reef fish in South China Sea. The total length of C. rostratus mitogenome is 16,538 bp, which consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and a control region, with the genome organization and gene order being identical to other typical vertebrate mitogenomes. The overall nucleotide composition of the H-strand is 28.05% A, 28.94% T, 16.22% G and 26.79% C, with an A + T bias. This study will provide the first complete mitochondrial genome of Chelmon rostratus as useful information for the application of fish phylogenetic relationship analysis within the butterflyfish species. PMID:25427816

  16. Mitochondrial genome of the blackfin tuna Thunnus atlanticus Lesson, 1831 (Perciformes, Scrombidae).

    PubMed

    Márquez, Edna J; Isaza, Juan P; Alzate, Juan F

    2016-05-01

    Blackfin tuna, Thunnus atlanticus is a widespread epipelagic oceanic species in the western Atlantic. So far the mitochondrial genome of this species remained unknown, although the mitogenomes of all congeners are known. The mitochondrial genome encodes for 13 proteins, 21 tRNAs, 2 ribosomal RNAs and the gene synteny is conserved with other previously reported mitogenomes of tunas. PMID:25269003

  17. Complete mitochondrial genome of the striped scat Selenotoca multifasciata (Perciformes: Scatophagidae).

    PubMed

    Liu, Zhenhao; Mu, Xingjiang; Li, Hong; Gui, Lang; Zeng, Wengang; Zhang, Junbin

    2016-07-01

    The striped scat Selenotoca multifasciata is an ornamental and commercial fish in Asia. In the present study, we sequenced and annotated the complete mitochondrial genome of Selenotoca multifasciata. Its total length is 16,646 bp, and the mitochondrial genome is composed of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a non-coding control region. ND6 and eight tRNA genes were encoded on the light strand, whereas the remaining genes located on the heavy strand (H-strand). All the 16 mitochondrial genomes of the suborder Acanthuroidei available in GenBank were employed for phylogenetic analysis, and the result showed a close relationship between Selenotoca multifasciata and Scatophagus argus. This mitochondrial information may benefit relative ecological and phylogenetic studies. PMID:27158788

  18. First record of red filament threadfin bream, Nemipterus marginatus (Valenciennes, 1830) (Perciformes, Nemipteridae), from Chinese waters

    NASA Astrophysics Data System (ADS)

    Ning, Ping; Wu, Renxie; Liu, Jing

    2011-11-01

    We collected five specimens of threadfin bream from Beihai, Guangxi, China in March 2010. These were subsequently identified as red filament threadfin bream Nemipterus marginatus (Valenciennes, 1830), being the first record of this species from Chinese waters. N. marginatus is distinguished by the following characteristics: lower border of eye lies above a line from tip of snout to upper base of pectoral fin; mouth oblique, maxillary extending to lower anterior border of pupil; teeth in jaws in several rows, pointed; upper jaw with 3 to 5 pairs of small recurved canines; suborbital with straight lower edge and rounded posterior edge; pectoral fins extending to between level of anus and origin of anal fin; pelvic fins reaching to the first or second anal rays; caudal fin forked, upper lobe tails into a short reddish filament; dorsal fin bluish with a yellow margin distally and a broad yellow median band which subdivides posteriorly into 3 small bands.

  19. Early development in the mouth-brooding cichlid fish Satanoperca pappaterra (Perciformes: Cichlidae).

    PubMed

    Miranda Lopes, Taise; Garcia de Oliveira, Fernando; Bialetzki, Andréa; Antonio Agostinho, Angelo

    2015-03-01

    The Neotropical region exhibits the largest diversity of fish worldwide; however, little is known about the early development of fish species from this region. Therefore, to contribute to this knowledge, this study aimed to morphologically describe the early stages of development (eggs, larvae and juveniles) of S. pappaterra using morphometric and meristic traits, and to assess changes in growth rates throughout larval and juvenile development by analyzing the relationships between various morphometric traits using analytical regression models. Both juvenile and adult individuals with mouth-brooded offspring were collected along the basins of the Cuiaba and Manso Rivers in the state of Mato Grosso, Brazil between March 2000 and March 2004. After the adults were identified, the offspring were classified according to its stage (embryonic, larval or juvenile period), and various morphometric and meristic variables were individually measured (when possible). The eggs of this species are yellow in color, oval shaped, show dendritic pigmentation within their yolk, have small to moderately sized perivitelline spaces and lack a mucous membrane and oil droplets. The horizontal and vertical diameters of the sample yolks ranged from 1.43mm to 2.70mm and 1.05mm to 1.68 mm, respectively. The standard length of the larval period varied from 4.30mm to 7.16mm, and the standard length of the juvenile period varied from 10.29mm to 24.57mm. Larvae exhibit yolk sacs with internal dendritic pigmentation and dark punctate pigmentation in the dorsal and ventral body regions, whereas irregular transverse spots along the flanks are observed during the juvenile period. Adhesive organs are only present during the yolk-sac stage and at the beginning of the flexion stage. The mouth is terminal during all stages of development. The myomere number varied from 22 to 29 (9 to 16 pre-anal and 10 to 16 post-anal), and the maximal numbers of fin rays and spines were as follows: dorsal, XVI+10; anal, IV+8; pectoral, 16; and pelvic, I+8. Growth analyses identified periods of important change in larval morphology (i.e., metamorphosis), particularly during the flexion and post-flexion stages and in juveniles. Therefore, the morphological development of S. pappaterra is consistent with the ecological requirements of this species, which primarily occurs in structured lentic environments with aquatic macrophytes. PMID:26299120

  20. Kudoa saudiensis sp. n. (Myxosporea: Multivalvulida) infecting oocytes of the Indian mackerel Rastrelliger kanagurta (Perciformes: Scombridae).

    PubMed

    Mansour, Lamjed; Harrath, Abdel Halim; Abdel-Baki, Abdel-Azeem S; Al-Quraishy, Saleh; Al, Suliman Y Omar

    2015-01-01

    During a survey the occurrence of Kudoa quraishii Mansour, Harrath, Abd-Elkader, Alwasel, Abdel-Baki et Al Omar, 2014, recently identified in the muscles of the Indian mackerel, Rastrelliger kanagurta (Cuvier), a species of Kudoa Meglitsch, 1947 infecting oocytes of mature females of the same host fish was found. The new species, for which the name Kudoa saudiensis sp. n. is proposed, infects oocytes that are enlarged with a whitish colour. The parasite develops in vesicular polysporous plasmodia within the oocyte. Infection occurs with a mean prevalence of 20% (7/35) of examined females. Mature spores are quadratic in shape in apical view, having four equal valves and four symmetrical polar capsules. Fresh spores are 2.4-3.6 µm long (mean ± SD 3.1 ± 0.3 µm), 4.3-5.4 µm (4.7 ± 0.3 µm) wide and 3.4-4.3 µm (3.8 ± 0.3 µm) in thickness and long. The smaller size of the new Kudoa species was the distinctive feature that separates it from all previously described species. Molecular analysis based on the SSU rDNA sequences shows that the highest percentage of similarity of 98.5% was observed with K. ovivora Swearer et Robertson, 1999, reported from oocytes of labroid fish from the Caribbean coasts of Panama. The percentage of similarity was 98% with K. azevedoi Mansour, Thabet, Chourabi, Harrath, Gtari, Al Omar et Ben Hassine, 2013 and 89% with K. quraishii. Phylogenetic analysis of the SSU and LSU rDNA data revealed a consistent of the new species with K. azevedoi and K. ovivora. Our findings support the creation of Kudoa saudiensis sp. n. that infects oocytes of the Indian mackerel Rastrelliger kanagurta. PMID:25960554

  1. A new species of the cardinalfish genus Siphamia (Perciformes, Apogonidae) from West Papua, Indonesia.

    PubMed

    Gon, Ofer; Allen, Gerald R; Erdmann, Mark V; Gouws, Gavin

    2014-01-01

    A new species of the cardinalfish genus Siphamia is described from specimens collected in the Province of West Papua, Indonesia, at depths of 50-72 m. Siphamia papuensis n. sp. has a striated light organ which makes it a member of the S. tubifer species group. Within this group it is closely related to S. argentea, sharing with the latter 13 pectoral-fin rays, 9 developed gill rakers and an irregular pattern of yellowish green bars on the body. It differs from S. argentea in having an incomplete lateral line and in lacking dark marks on the head, and at the origin and end of the dorsal-fin and anal-fin bases, as well as the absence of red spots along the light organ and along the back. Japanese records of S. tubulata are reidentified as S. argentea, and new locality records for S. argentea and S. stenotes are reported. Analysis of sequence data from a 16S rDNA fragment revealed the clear separation of S. papuensis n. sp., S. argentea and other included Siphamia species (S. jebbi, S. tubifer and S. stenotes).  PMID:25543639

  2. Reproductive biology of common snook Centropomus undecimalis (Perciformes: Centropomidae) in two tropical habitats.

    PubMed

    Perera-García, Martha A; Mendoza-Carranza, Manuel; Contreras-Sánchez, Wilfrido M; Huerta-Ortíz, Maricela; Pérez-Sánchez, Eunice

    2011-06-01

    In Southeastern Mexico, Centropomus undecimalis is an important fish species of sport and commercial fisheries for coastal and riverine communities. Fisheries along rivers and coasts depend on migratory habits of this species, and these movements are probably related to reproduction. In spite of its economic importance, few studies have been conducted focusing on its reproductive biology, and this research aims to analyze these habits. Samples (fork length, somatic and gonads weight, and macroscopic maturity stages) were obtained from organisms collected by fishermen from the largest fishing cooperatives along the coastal and riverine areas of Tabasco, from July 2006 to March 2008. Fish size ranged from 34 to 112 cm fork length, with an average age of 6.42 years for males and 9.12 years for females. In riverine areas, fish sizes ranged from 30 to 85 cm and the average age was 5.5 years for males and 6.6 years for females. Significant differences were recorded between lengths of males and females from the two areas (Kruskal-Wallis, p < 0.05). The male:female ratio was 1:0.68 in the coast, and 1:0.16 in riverine areas. The length-weight relationship did not vary between both sexes among areas (ANCOVA, p > 0.05). A curve for eviscerated weight was calculated for both sexes, for coastal fishes SW = 0.0059 (FL)3.07, and the riverine ones SW = 0.0086 (FL) 2.98, with an isometric growth (b = 3). The period of maximum reproduction was from July to August, with temperatures of 28 to 30 degrees C. A significant correlation between the gonadosomatic index (GSI) and rainfall was recorded for samples of both males and females from coastal areas (r = 0.63, r = 0.70) whereas only one positive correlation was recorded for riverine females (r = 0.57). The size at first maturity (L50) was estimated at 60 cm and 80 cm (FL), corresponding to 5.5 and 8.5 years of age, for males and females, respectively. An important proportion of mature females of eight years and older, suggests that these ages contribute significantly to the reproductive biomass. The results indicate that due to changes in the exploitation period, we recommend to protect populations of the common snook. PMID:21717854

  3. Ontogeny of the lymphoid organs in an Antarctic teleost, Harpagifer antarcticus (Notothenioidei: Perciformes).

    PubMed

    O'Neill, J G

    1989-01-01

    The effect of an evolutionary adaptation to low environmental temperature on the development of lymphoid organs was examined in Harpagifer antarcticus from Signy Island (South Orkney Islands; 60 degrees 43'S, 45 degrees 38'W). Thymus, pronephric kidney and spleen were typical, both in position and structural development, of those observed in warmer-water teleosts. The pronephric kidney was the first organ to be infiltrated by leucocytes, at 1 h post-hatch, though the infiltration of the thymic epithelia and the development of the splenic anlage were not observed until 4 weeks post-hatch. Full development of the lymphoid organs was not achieved until the juvenile stage. Although an increased infiltration of the thymus, by subepithelial connective tissues and epithelial mucous cells, occurred in the juvenile and adult stages, there was no evidence of an advanced stage of thymic regression or involution in the adult Harpagifer. Thus, a suppressive influence of the low temperature environment, on the onset and degree of lymphoid organ development and thymic involution, was indicated in this species. PMID:2767306

  4. Primary male development of two sequentially hermaphroditic groupers, Epinephelus akaara and Epinephelus awoara (Perciformes: Epinephelidae).

    PubMed

    Liu, M; Wang, Y-Y; Shan, X-J; Kang, B; Ding, S-X

    2016-04-01

    Gonad ontogeny of the Hong Kong grouper Epinephelus akaara (a bi-directional sex changer) and the yellow grouper Epinephelus awoara (a protogynous hermaphrodite) was examined for the first time from post-larval phase until first sexual maturation, by histology. Approximately 20 specimens of each species were collected randomly every 2-7 weeks from rearing tanks with natural sea water and temperature between June 2013 and June 2014. The paired gonadal primordia (GP) were observed at 6 weeks after hatching (wah) for both species; however, gonia were first observed in GP at 16 wah for E. akaara and at 8 wah for E. awoara. The timings for the appearance of primary-growth stage oocytes (O1) and the completion of ovarian lumen (OL) varied; both at 27 wah for E. akaara, and at 18 and 23 wah for E. awoara respectively. A bisexual-phase gonad with an OL, O1 and scattered spermatogenic cysts (SC) was observed at 27-29 wah for both E. akaara and E. awoara. Sexual differentiation was subsequently observed from the bisexual-phase gonad at 34 wah for E. akaara, and 41 wah for E. awoara, with the appearance of cortical-alveolus stage oocytes (O2) for developing female and the proliferation of SC for developing primary male (i.e. from juvenile directly). Ovaries of mature females contained the vitellogenic stage oocytes (O3) and scattered SC; testes of mature primary males had sperm in sperm sinuses within the gonadal wall and remained O1. Minimum age of first sexual maturation for both female and primary male of E. akaara was at 41 wah; minimum total length (LT ) of female (143 mm) was larger than that of primary male (137 mm LT ). Minimum age and size of first sexual maturation for female of E. awoara (47 wah and 149 mm LT , respectively) were larger than those of E. akaara. Developing primary males of E. awoara were found at 41-58 wah, however, mature males were not observed, indicating inconsistency in first sexual maturation for E. awoara. This study provided strong evidences of primary male pathway in E. akaara and E. awoara; the latter is confirmed to be diandric. PMID:26935897

  5. DNA barcoding of commercially important Grouper species (Perciformes, Serranidae) in the Philippines.

    PubMed

    Alcantara, Simon G; Yambot, Apolinario V

    2014-09-19

    Abstract Fish identification is generally challenging because of their unpronounced and overlapping morphological characters which is true in grouper species. In the Philippines, an updated, reliable and accurate inventory of this high value commercial groupers has not been carried out previously. Using molecular tools in the identification and inventory of fish species in the country is confined to few laboratories and experts in the country. In this study, 27 species of the Serranidae family were identified from the grouper samples collected from major fish landing sites and markets in the Philippines. The grouper species were molecularly identified using the cytochrome c oxidase I (COI) sequences for DNA barcoding. The accuracy of the inferred species-level taxonomy based on COI is supported with high similarity search (98-100%) both in BOLD and BLAST, well-distributed genetic distance values and cohesive clustering in the Neighbor-Joining Tree. Aside from reinforcing the classical methodology of grouper identification in the country, this pioneering study on molecular identification of Philippine groupers constitutes a significant contribution to the DNA barcode library of Philippine marine fishes and to the global barcode entries in general, which can be used when dealing with grouper taxonomy, biodiversity, stock assessment and trade. The results reveal the different localities where the grouper species can be possibly sourced out in the country for trade and aquaculture purposes. Several of the grouper species are included in the IUCN Red List of Threatened Species. As a tool for conservation ecology, this study signals the implementation of sustainable fisheries management regulation to protect in particular those which are listed under the IUCN. PMID:25238110

  6. Complete mitochondrial genome of the sixblotch hind Cephalopholis sexmaculata (Pisces: Perciformes).

    PubMed

    Hsiao, Sheng-Tai; Chen, Kao-Sung; Tseng, Chen-Te; Wu, Chi-Lun

    2016-01-01

    The complete mitogenome of the sixblotch hind, Cephalopholis sexmaculata was presented in this study. This mitochondrial genome consists of 16,589 bp, with 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a noncoding control region (CR), and its gene arrangement is identical to most vertebrates. The overall base composition of the heavy strand is A, 29.35%; G, 16.08%; C, 28.56%; and T, 26.01%. The COI gene started with GTG codon and the ATP6 gene started with CTG codon. The complete mitogenomic data may provide informative for further phylogenetic approach of species of Cephalopholis and related genera belong to the Epinephelidae groupers. PMID:24938086

  7. Luzonichthys seaver, a new species of Anthiinae (Perciformes, Serranidae) from Pohnpei, Micronesia

    PubMed Central

    Ka'apu-Lyons, Cassie A; Pyle, Richard L.

    2015-01-01

    Abstract Luzonichthys seaver, n. sp., is described from two specimens, 42-46 mm standard length (SL) collected from Pohnpei, Micronesia. Collections were made by divers on mixed-gas closed-circuit rebreathers using hand nets at depths of 90-100 m. Luzonichthys seaver is distinct from all other species of the genus in the characters of lateral line scales, gill rakers, pelvic fin length, caudal concavity and coloration. Of the six species of Luzonichthys, it appears to be morphologically most similar to L. earlei and L. whitleyi. PMID:25941454

  8. Complete mitochondrial genome of the spiny eel Sinobdella sinensis (Perciformes, Mastacembelidae).

    PubMed

    Gao, Tianheng; Chen, Daqing

    2016-09-01

    In this study, the complete mitochondrial genome of Sinobdella sinensis was reported. The circular genome is 16,540 bp in length and consists of 13 protein-coding genes, 22 tRNA genes, 2 ribosomal RNA genes, and 1 control region. The overall nucleotide composition was 30.0% A, 26.5% T, 28.7% C, and 14.8% G, with an A + T bias of 56.5%. The gene composition and the structural arrangement of the S. sinensis complete mtDNA were identical to most other vertebrates. The molecular data here we presented could play a useful role to study the evolutionary relationships and population genetics of Mastacembelidae fish. PMID:25707410

  9. A new fish species of the subfamily Serraninae (Perciformes, Serranidae) from the Philippines.

    PubMed

    Williams, Jeffrey T; Carpenter, Kent E

    2015-01-01

    A new species of serranine fish is described from the Philippine Islands. A single specimen of a new species, Chelidoperca santosi, captured by fishermen working in Palawan waters was discovered in the public fish market in Iloilo City, Panay, Philippines. Two additional specimens of the new species, also from the Philippines, were subsequently discovered in the collections of the Museum Victoria, Australia. The new species is currently known only from the Philippines and is characterized by its distinctive coloration with a row of four small dark spots on the snout (two in front of each eye) and two dark spots on the chin (one on each side of the symphysis of the dentaries), a white anal fin with six large yellow spots separated by broad white interspaces and a narrow yellow distal border, caudal fin with narrow yellow bars and a yellowish distal margin and no dark spots, and a combination of meristic and morphological characters.  PMID:25661613

  10. 50 CFR 665.201 - Definitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... stripe snapper Lutjanus kasmira. kalekale yellowtail snapper Pristipomoides auricilla. `pakapaka pink snapper Pristipomoides filamentosus. kalekale pink snapper Pristipomoides seiboldii. gindai...

  11. 50 CFR 665.201 - Definitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... stripe snapper Lutjanus kasmira. kalekale yellowtail snapper Pristipomoides auricilla. `pakapaka pink snapper Pristipomoides filamentosus. kalekale pink snapper Pristipomoides seiboldii. gindai...

  12. 50 CFR 665.201 - Definitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... stripe snapper Lutjanus kasmira. kalekale yellowtail snapper Pristipomoides auricilla. `pakapaka pink snapper Pristipomoides filamentosus. kalekale pink snapper Pristipomoides seiboldii. gindai...

  13. 50 CFR 665.201 - Definitions.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... stripe snapper Lutjanus kasmira. kalekale yellowtail snapper Pristipomoides auricilla. `pakapaka pink snapper Pristipomoides filamentosus. kalekale pink snapper Pristipomoides seiboldii. gindai...

  14. 50 CFR 665.201 - Definitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... stripe snapper Lutjanus kasmira. kalekale yellowtail snapper Pristipomoides auricilla. `pakapaka pink snapper Pristipomoides filamentosus. kalekale pink snapper Pristipomoides seiboldii. gindai...

  15. B-cell activating CpG ODN 1668 enhance the immune response of Pacific red snapper (Lutjanus peru) exposed to Vibrio parahaemolitycus.

    PubMed

    Cárdenas-Reyna, Tomás; Angulo, Carlos; Hori-Oshima, Sawako; Velázquez-Lizárraga, Esteban; Reyes-Becerril, Martha

    2016-09-01

    B-class CpG ODN 1668 is known to possess clear immunostimulatory properties. In this study, we investigated the potential ability of CpG ODN 1668 to enhance the immune response of Pacific red snapper exposed to Vibrio parahaemolyticus. Four different treatments were evaluated in Pacific red snapper: (1) stimulatory CpG ODN 1668, (2) stimulatory CpG ODN 1668 and V. parahaemolyticus, (3) exposure only to V. parahaemolyticus and (4) PBS. Samples were taken at 24, 72, 168 and 240 h of stimulation/infection. The results show that intraperitoneal injection of CpG-ODN 1668 enhanced the anti-protease, superoxide dismutase and catalase activities in serum. CpG ODN 1668 upregulated TLR9 and IgM gene expression in head-kidney, intestine and skin, with higher expression in head-kidney. A higher correlation was observed between TLR9 and IgM in head-kidney and intestine. Finally, no histopathological damages were observed in fish stimulated with CpG ODN 1668. In contrast, melanomacrophages-like structures were present in higher numbers in infected fish. Taken together, these results indicate that CpG ODN 1668 activates innate immune response and upregulate the TLR9 and IgM-mediated immune response. These results may be exploited for the control of Vibriosis in farmed Pacific red snapper. PMID:27143535

  16. Projecting Range Limits with Coupled Thermal Tolerance - Climate Change Models: An Example Based on Gray Snapper (Lutjanus griseus) along the U.S. East Coast

    PubMed Central

    Hare, Jonathan A.; Wuenschel, Mark J.; Kimball, Matthew E.

    2012-01-01

    We couple a species range limit hypothesis with the output of an ensemble of general circulation models to project the poleward range limit of gray snapper. Using laboratory-derived thermal limits and statistical downscaling from IPCC AR4 general circulation models, we project that gray snapper will shift northwards; the magnitude of this shift is dependent on the magnitude of climate change. We also evaluate the uncertainty in our projection and find that statistical uncertainty associated with the experimentally-derived thermal limits is the largest contributor (∼ 65%) to overall quantified uncertainty. This finding argues for more experimental work aimed at understanding and parameterizing the effects of climate change and variability on marine species. PMID:23284974

  17. The effects of temperature on gastric emptying time of malabar blood snapper (Lutjanus malabaricus, Bloch & Schneider 1801) using X-radiography technique

    SciTech Connect

    Mazumder, Sabuj Kanti; Ghaffar, Mazlan Abd.; Das, Simon Kumar

    2015-09-25

    Water temperature can influence the metabolic rate of ectothermal animal such as, fish. This study aims to investigate the gastric emptying time (GET) of malabar blood snapper (L. malabaricus) at different temperature (22, 26, 30, 34°C) fed with commercial diet pellet. The gastric emptying times at different temperatures were determined X-radiographically, using barium sulfate (BaSO{sub 4}) as a contrast medium food marker. The food marker and X-radiography showed that initial voidance of fecal matter began 4-8 h after feeding at all temperature. The fastest GET (18 h) was obsereved at 30°C, whereas the longest (28 h) GET was seen at 22°C. GET was increased with increasing temperature up to 30°C whereas decreased at extreme (34°C) and stress temperature (22°C). The findings of this study suggest to culture L. malabaricus at 26-30°C with commercial diet pellet as this temperature ranges escalate the faster digestion process which may contribute faster growth rate of this commercially important fish species. Overall, the data obtained from this study may have important consequences for optimization of commercial production of malabar blood snapper.

  18. The effects of temperature on gastric emptying time of malabar blood snapper (Lutjanus malabaricus, Bloch & Schneider 1801) using X-radiography technique

    NASA Astrophysics Data System (ADS)

    Mazumder, Sabuj Kanti; Ghaffar, Mazlan Abd.; Das, Simon Kumar

    2015-09-01

    Water temperature can influence the metabolic rate of ectothermal animal such as, fish. This study aims to investigate the gastric emptying time (GET) of malabar blood snapper (L. malabaricus) at different temperature (22, 26, 30, 34°C) fed with commercial diet pellet. The gastric emptying times at different temperatures were determined X-radiographically, using barium sulfate (BaSO4) as a contrast medium food marker. The food marker and X-radiography showed that initial voidance of fecal matter began 4-8 h after feeding at all temperature. The fastest GET (18 h) was obsereved at 30°C, whereas the longest (28 h) GET was seen at 22°C. GET was increased with increasing temperature up to 30°C whereas decreased at extreme (34°C) and stress temperature (22°C). The findings of this study suggest to culture L. malabaricus at 26-30°C with commercial diet pellet as this temperature ranges escalate the faster digestion process which may contribute faster growth rate of this commercially important fish species. Overall, the data obtained from this study may have important consequences for optimization of commercial production of malabar blood snapper.

  19. Biogeography of tropical Indo-West Pacific parasites: a cryptic species of Transversotrema and evidence for rarity of Transversotrematidae (Trematoda) in French Polynesia.

    PubMed

    Cribb, Thomas H; Adlard, Robert D; Bray, Rodney A; Sasal, Pierre; Cutmore, Scott C

    2014-04-01

    We sought transversotrematid trematodes from French Polynesian fishes by examining 304 individual scaled fishes of 53 species from seven families known to harbour the family elsewhere. A single species was found at two locations in the Tuamotus Archipelago on two species of Chaetodontidae (Chaetodon auriga and Chaetodon ephippium) and one species of Lutjanidae (Lutjanus gibbus). The species closely resembles Transversotrema borboleta Hunter & Cribb, 2012 from chaetodontids and lutjanids of the northern Great Barrier Reef (GBR) but differs from it consistently in 8 base positions of ITS2 rDNA. This level of variation exceeds that between some clearly morphologically distinct pairs of species of Transversotrema and the form from French Polynesia is thus interpreted as a distinct, though cryptic, species and named Transversotrema polynesiae n. sp. The new species forms part of a complex of species, here characterised as the T. borboleta complex, associated with chaetodontids and lutjanids in the tropical Indo-West Pacific. Most of the putative species within this complex are yet to be described. Comparison of identical numbers of matched samples of fishes from French Polynesia, Heron Island (southern GBR) and Lizard Island (northern GBR) revealed 1, 4 and 10 species of Transversotrema respectively suggesting that the French Polynesian fauna is depauperate for this family. In addition to those species apparently missing from suitable hosts in French Polynesia, several species from further west infect fishes (especially Nemipteridae) that are themselves absent from French Polynesia. This dramatic east-west decline in richness contrasts strongly with what is known for monogeneans, which appear to maintain their richness over the same scale, and is more precipitate than is known for other groups of trematodes. The decline might be explained in part by the absence of the as yet unknown first intermediate hosts in French Polynesia. However, we predict that it is explained

  20. Genomic Organization of Repetitive DNA Elements and Its Implications for the Chromosomal Evolution of Channid Fishes (Actinopterygii, Perciformes)

    PubMed Central

    Cioffi, Marcelo de Bello; Bertollo, Luiz Antonio Carlos; Villa, Mateo Andres; de Oliveira, Ezequiel Aguiar; Tanomtong, Alongklod; Yano, Cassia Fernanda; Supiwong, Weerayuth; Chaveerach, Arunrat

    2015-01-01

    Channid fishes, commonly referred to as “snakeheads”, are currently very important in Asian fishery and aquaculture due to the substantial decline in natural populations because of overexploitation. A large degree of chromosomal variation has been found in this family, mainly through the use of conventional cytogenetic investigations. In this study, we analyzed the karyotype structure and the distribution of 7 repetitive DNA sequences in several Channa species from different Thailand river basins. The aim of this study was to investigate the chromosomal differentiation among species and populations to improve upon the knowledge of its biodiversity and evolutionary history. Rearrangements, such as pericentric inversions, fusions and polyploidization, appear to be important events during the karyotypic evolution of this genus, resulting in the chromosomal diversity observed among the distinct species and even among populations of the same species. In addition, such variability is also increased by the genomic dynamism of repetitive elements, particularly by the differential distribution and accumulation of rDNA sequences on chromosomes. This marked diversity is likely linked to the lifestyle of the snakehead fishes and their population fragmentation, as already identified for other fish species. The karyotypic features highlight the biodiversity of the channid fishes and justify a taxonomic revision of the genus Channa, as well as of the Channidae family as a whole, as some nominal species may actually constitute species complexes. PMID:26067030

  1. A complex of species related to Paradiscogaster glebulae (Digenea: Faustulidae) in chaetodontid fishes (Teleostei: Perciformes) of the Great Barrier Reef.

    PubMed

    Diaz, Pablo E; Bray, Rodney A; Cutmore, Scott C; Ward, Selina; Cribb, Thomas H

    2015-10-01

    A total of 1523 individuals of 34 species of chaetodontids from the Great Barrier Reef were examined for faustulid trematodes. Specimens resembling Paradiscogaster glebulae Bray, Cribb & Barker, 1994 were found in nine chaetodontid species at three localities. These specimens are shown, on the basis of combined morphological and molecular analyses, to comprise a complex of morphologically similar and partly cryptic species. The complex may comprise as many as six distinct species of which three are resolved here. The true P. glebulae is identified in Chaetodon ornatissimus Cuvier, 1831, Chaetodon aureofasciatus Macleay, 1878, Chaetodon plebeius Cuvier, 1831, Chaetodon rainfordi McCulloch, 1923 and Chaetodon speculum Cuvier, 1831. Two new species are described, Paradiscogaster munozae n. sp. from Heniochus varius (Cuvier, 1829), Heniochus chrysostomus Cuvier, 1831 and Chaetodon citrinellus Cuvier, 1831 and Paradiscogaster melendezi n. sp. from Chaetodon kleinii Bloch, 1790. In terms of morphology the three species differ most clearly in the development of the appendages on the ventral sucker. The three species differ at 3-6consistent bp of ITS2 rDNA. The host-specificity of the three species differs strikingly. P. melendezi n. sp. infects just one fish species, P. glebulae infects species of only one clade of Chaetodon, and P. munozae n. sp. infects quite unrelated species. The basis of this unusual pattern of host-specificity requires further exploration. Two of the species recognised here, P. glebulae and P. munozae n. sp., showed apparent intra-individual variation in the ITS2 rDNA sequences as demonstrated by clear, replicated double peaks in the electropherograms. PMID:26096311

  2. Reproduction of Blackfin tuna Thunnus atlanticus (Perciformes: Scombridae) in Saint Peter and Saint Paul Archipelago, Equatorial Atlantic, Brazil.

    PubMed

    Bezerra, Natalia P A; Fernandes, Cezar A F; Albuquerque, Fernanda V; Pedrosa, Vanessa; Hazin, Fábio; Travassos, Paulo

    2013-09-01

    The reproduction of Blackfin tuna Thunnus atlanticus has been described for coastal regions, and for a long time, this species was considered to be a strictly continental spawner. Recently, this species was observed around a seamount habitat 500 nautical miles Northeast of Brazil, located between South America and Africa. In this study we describe the reproductive biology of Blackfin tuna at Saint Peter and Saint Paul Archipelago (SPSPA). Male and female gonads were sampled from December 2008 to July 2010, and analyzed macro and microscopically. A total of 361 fish were sampled (247 males and 114 females). Males were more common than females, with a sex ratio of 2.2 male:1 female. The fork length (FL) of all sampled specimens ranged from 38 to 98cm, and larger length classes were more frequent in males. It was possible to distinguish six maturity phases for females: immature, developing, spawning capable, actively spawning, regressing and recovering. Five phases were identified for males: immature, developing, spawning capable, actively spawning and recovering. The gonad index (GI) mean monthly values ranged from 6.6 (SD = 4.1) to 58.4 (SD = 34.7) for females, and from 2.6 (SD = 1.3) to 66.2 (SD = 30.4) for males. For both sexes, the largest GI values were observed at the beginning of the first semester of the year. Size at first maturity was estimated at 48cm FL and 55cm FL for females and males respectively. Approximately 80% of the specimens were adults and considered to be in reproductive conditions. Histological analysis of the ovaries and testes showed that most of the specimens were sexually mature and were reproductively active during all months of the year. However, females with mature ovaries, with large amounts of hydrated oocytes and post-ovulatory follicles, were mainly found from December to March, thus these months may constitute the main spawning season in SPSPA. Batch fecundity varied between 272025 and 1,140584 oocytes for 56 and 68 cm FL females respectively. Oocyte development and spawning patterns suggest a multiple spawning behavior. The results revealed that Blackfin tuna is using the SPSPA as a spawning ground, similar to other species commonly observed in the same area during the same reproductive season. PMID:24027926

  3. Relative yield-per-recruit and management strategies for Cynoscion acoupa (Perciformes: Sciaenidae) in Lake Maracaibo, Venezuela.

    PubMed

    Montaño, Orlando José Ferrer; Morales, Isabel Cristina

    2013-03-01

    Acoupa weakfish, Cynoscion acoupa, in Lake Maracaibo is subject to intense commercial fishing by an artisanal fleet, and a recent decrease in fish size observed from landings is of concern. This fishery has not yet been modeled, and its assessment and the establishment of management practices to overcome the current overfished condition are urgently needed. To address this, we used recent and past empirical growth estimates to model relative yield-per-recruit under different lengths at first capture. Our results from relative yield-per-recruit analysis showed evidence that growth and recruitment overfishing occur under current fishing practices in Lake Maracaibo. Particular attention was given to fishing practices in El Tablazo Bay where young, small fish predominate in the commercial catches (mean total length=33.7cm), well below the length at first sexual maturity (-40cm TL) for both sexes. As management strategies, we propose to set a mesh size limit at or above 8.89cm (3.5in), which will reduce fishing mortality of immature fish, increase yield-per-recruit, and will result in an increase of Acoupa weakfish recruitment for the long term in Lake Maracaibo. PMID:23894971

  4. Genome Sequencing of the Perciform Fish Larimichthys crocea Provides Insights into Molecular and Genetic Mechanisms of Stress Adaptation

    PubMed Central

    Shi, Qiong; Zhu, Lv-Yun; Li, Ting; Ding, Yang; Nie, Li; Li, Qiuhua; Dong, Wei-ren; Jiang, Liang; Sun, Bing; Zhang, XinHui; Li, Mingyu; Zhang, Hai-Qi; Xie, ShangBo; Zhu, YaBing; Jiang, XuanTing; Wang, Xianhui; Mu, Pengfei; Chen, Wei; Yue, Zhen; Wang, Zhuo; Wang, Jun; Shao, Jian-Zhong; Chen, Xinhua

    2015-01-01

    The large yellow croaker Larimichthys crocea (L. crocea) is one of the most economically important marine fish in China and East Asian countries. It also exhibits peculiar behavioral and physiological characteristics, especially sensitive to various environmental stresses, such as hypoxia and air exposure. These traits may render L. crocea a good model for investigating the response mechanisms to environmental stress. To understand the molecular and genetic mechanisms underlying the adaptation and response of L. crocea to environmental stress, we sequenced and assembled the genome of L. crocea using a bacterial artificial chromosome and whole-genome shotgun hierarchical strategy. The final genome assembly was 679 Mb, with a contig N50 of 63.11 kb and a scaffold N50 of 1.03 Mb, containing 25,401 protein-coding genes. Gene families underlying adaptive behaviours, such as vision-related crystallins, olfactory receptors, and auditory sense-related genes, were significantly expanded in the genome of L. crocea relative to those of other vertebrates. Transcriptome analyses of the hypoxia-exposed L. crocea brain revealed new aspects of neuro-endocrine-immune/metabolism regulatory networks that may help the fish to avoid cerebral inflammatory injury and maintain energy balance under hypoxia. Proteomics data demonstrate that skin mucus of the air-exposed L. crocea had a complex composition, with an unexpectedly high number of proteins (3,209), suggesting its multiple protective mechanisms involved in antioxidant functions, oxygen transport, immune defence, and osmotic and ionic regulation. Our results reveal the molecular and genetic basis of fish adaptation and response to hypoxia and air exposure. The data generated by this study will provide valuable resources for the genetic improvement of stress resistance and yield potential in L. crocea. PMID:25835551

  5. [Distribution and abundance of Katsuwonus pelamis larvae (Perciformes: Scombridae) in the Gulf of Mexico, 1982-1992].

    PubMed

    Guevara-Rascado, Ma de Lourdes; Cerecedo-Escudero, José Luis; Sánchez-Regalado, Ramón

    2008-09-01

    The epipelagic fish known as skipjack (Katsuwonus pelamis) is considered inside the "little tuna" group. The species is distributed in tropical and subtropical waters worldwide. Despite its fisheries importance in Mexico, there is little knowledge about the species in the region. The information from 18 oceanographic cruises inside the Mexican exclusive economic zone in the Gulf of Mexico and Caribbean Sea, was analyzed for the period 1982 to 1992. Plankton was collected in a paired 60 cm mouth bongo net sampler with 0.333 mm mesh nets in oblique tows. The maximum abundance was in spring and summer; 1986 had the largest population (4 881.8544 X 10(9) larvae) and 1983 the lowest density (566.3748 X 10(9)). The skipjack has suitable conditions for reproduction in this area, and the southwestern region is the most productive. The spawning was greater in the summer. The annual biomass was estimated in 2 513 to 21 659 tons, the high value corresponded to 1986, with potential yields between 7 472 and 10 071 tons. A local fishery seems viable but needs further evidence. PMID:19419048

  6. Description of a new species of rabbitfish (Perciformes: Siganidae) from southern India, Sri Lanka and the Maldives.

    PubMed

    Woodland, David J; Anderson, R Charles

    2014-01-01

    Siganus insomnis sp. nov. is described from the Maldives, Sri Lanka and southern India. It most closely resembles S. lineatus (Valenciennes) from the Western Pacific but differs in coloration, principally in that most if not all of the bronze bands on its mid and upper sides continue horizontally and unbroken through to the nape and opercular slit. By contrast, in S. lineatus, typically the anterior area below the spinous dorsal fin down to the mid-sides is irregularly marked with golden bronze spots, commas, or a maze of contorted lines. S. guttatus (Bloch) is the third member of this group of sibling species; its sides are covered with orange to bronze-gold spots. It is distributed throughout S.E. Asia, i.e., it occupies a geographic position between the areas inhabited by S. lineatus and S. insomnis. Thus the gene pools of S. lineatus and S. insomnis are quarantined from one another by distance and the intervening presence of S. guttatus in S.E. Asia. The geographical separation of the populations of S. lineatus and S. insomnis from one another is reinforced by the absence of suitable, coralline habitats for these species in the western half of the Bay of Bengal.  PMID:24943153

  7. Illumina next-generation sequencing reveals the complete mitochondrial genome of Psenopsis anomala (Perciformes: Centrolophidae) with phylogenetic consideration.

    PubMed

    Chen, Huapu; Che, Zhiwei; Li, Jiantao; Dai, Mingli; Xiang, Ling; Deng, Siping; Zhu, Chunhua; Huang, Hai; Li, Guangli

    2016-09-01

    Using Illumina next-generation sequencing (NGS), the complete mitochondrial genome of the Psenopsis anomala was sequenced in the present study. The mitochondrial genome of P. anomala is 16,528 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The structure about gene order and composition of P. anomala mitochondrial genome is similar to those of most other vertebrates. The nucleotide compositions of the light strand in descending order is 29.18% of T, 27.97% of G, 27.06% of A, and 15.79% of C. With the exception of the NADH dehydrogenase subunit 6 (ND6) and eight tRNA genes, other mitochondrial genes are encoded on the heavy strand. The phylogenetic analysis by maximum-likelihood (ML) method shown that the Psenopsis anomala was closer to Peprilus triacanthus in the phylogenetic relationship. PMID:25974666

  8. Redescription of Cheilinus quinquecinctus Rüppell, 1835 (Pisces: Perciformes, Labridae), a valid endemic Red Sea wrasse.

    PubMed

    Bogorodsky, Sergey V; Alpermann, Tilman J; Mal, Ahmad O

    2016-01-01

    The labrid fish Cheilinus quinquecinctus Rüppell, originally described from the Red Sea, has long been regarded as a junior synonym of C. fasciatus (Bloch). Herein, both nominal species are redescribed, based on examination of the types and additional material from the Red Sea (for C. quinquecinctus) and the Indo-West Pacific (for C. fasciatus). Rüppell's description of Cheilinus quinquecinctus was originally based on three syntypes, and the most representative adult specimen is designated as the lectotype. We show that Cheilinus quinquecinctus is restricted to the Red Sea and the Gulf of Aden, and it differs from the similar C. fasciatus in having modally fewer gill rakers on the first gill arch, a total of 13-16 (mean 13.9, usually 13 or 14 ) (vs. 13-16, mean 14.7, usually 14 or 15), in developing a ragged posterior margin of the caudal fin with age (versus only upper and lower caudal-fin lobes developing with age), and in its color pattern. The phylogenetic analysis of the COI barcoding region accords with the species status of C. quinquecinctus with the placement of the two sister species in two divergent and reciprocally monophyletic evolutionary lineages. A full description of C. quinquecinctus and diagnosis of C. fasciatus is provided here for comparison. In addition, the data include a table of the results of the meristic and morphological examination of type and additional specimens of both species from throughout their distribution ranges as well as a table of gill-raker counts of all examined specimens. Underwater color photographs are provided for comparison of juveniles, females and males of both species. PMID:27615897

  9. A new species of Ergasilus (Copepoda: Ergasilidae) from Geophagus altifrons and G. argyrostictus (Perciformes: Cichlidae) in the Brazilian Amazon.

    PubMed

    Taborda, Naraiana Lopes; Paschoal, Fabiano; Luque, José Luis

    2016-09-01

    A new species of ergasilid copepod, Ergasilus xinguensis n. sp., is described from females found on the gills of two cichlid fishes, Geophagus argyrostictus (Kullander, 1991) (type host) and G. altifrons (Heckel, 1840), from the Brazilian Amazon. The new species can be distinguished from congeners by the unique combination of the following characteristics: the cephalothorax is not inflated and is slightly constricted, the first antennulary segment bears 3 setae, maxillule with 3 unequal outer setae without minute process medially, maxilla has a large syncoxa with one seta near its basis, first and fourth legs are with a 3-segmented endopod, base of the exopod in leg 2 with a conspicuous bluntly-pointed projection and caudal ramus with two rows of curved conical spinules on ventral surface. The new species is the second member of Ergasilus von Nordmann, 1832 found on cichlids of the genus Geophagus (Heckel). PMID:27447219

  10. Pogonophryne neyelovi, a new species of Antarctic short-barbeled plunderfish (Perciformes, Notothenioidei, Artedidraconidae) from the deep Ross Sea

    PubMed Central

    Shandikov, Gennadiy A.; Eakin, Richard R.

    2013-01-01

    Abstract This paper continues descriptions of new deep-water Antarctic barbeled plunderfishes of the poorly known and the most speciose notothenioid genus Pogonophryne. It is based on a comprehensive collection obtained by the authors in 2009–2010 during an Antarctic toothfish (Dissostichus mawsoni) fishing trip. A new species, the hopbeard plunderfish Pogonophryne neyelovi, the twenty-second species of the genus, is described. The new species belongs to dorsally-spotted short-barbeled species forming the “Pogonophryne mentella” group. Pogonophryne neyelovi sp. n. is characterized by the following combination of characters: a very short and small mental barbel with an ovaloid and short terminal expansion covered by flattened scale-like processes that are mostly bluntly palmate; a moderately protruding lower jaw; a high second dorsal fin almost uniformly black and lacking a sharply elevated anterior lobe; pectoral fins striped anteriorly and uniformly light posteriorly; the anal and pelvic fins light; the dorsal surface of the head and the area anterior to the first dorsal fin covered with large, irregular dark brown blotches and spots; the ventral surface of the head, breast and belly without sharp dark markings. The new species is compared to the closest species Pogonophryne brevibarbata, Pogonophryne tronio, and Pogonophryne ventrimaculata. English vernacular names are proposed for all species of the genus. PMID:23794878

  11. A multi-gene dataset reveals a tropical New World origin and Early Miocene diversification of croakers (Perciformes: Sciaenidae).

    PubMed

    Lo, Pei-Chun; Liu, Shu-Hui; Chao, Ning Labbish; Nunoo, Francis K E; Mok, Hin-Kiu; Chen, Wei-Jen

    2015-07-01

    Widely distributed groups of living animals, such as the predominantly marine fish family Sciaenidae, have always attracted the attention of biogeographers to document the origins and patterns of diversification in time and space. In this study, the historical biogeography of the global Sciaenidae is reconstructed within a molecular phylogenetic framework to investigate their origin and to test the hypotheses explaining the present-day biogeographic patterns. Our data matrix comprises six mitochondrial and nuclear genes in 93 globally sampled sciaenid species from 52 genera. Within the inferred phylogenetic tree of the Sciaenidae, we identify 15 main and well-supported lineages; some of which have not been recognized previously. Reconstruction of habitat preferences shows repeated habitat transitions between marine and euryhaline environments. This implies that sciaenids can easily adapt to some variations in salinity, possibly as the consequence of their nearshore habitats and migratory life history. Conversely, complete marine/euryhaline to freshwater transitions occurred only three times, in South America, North America and South Asia. Ancestral range reconstruction analysis concomitant with fossil evidence indicates that sciaenids first originated and diversified in the tropical America during the Oligocene to Early Miocene before undergoing two range expansions, to Eastern Atlantic and to the Indo-West Pacific where a maximum species richness is observed. The uncommon biogeographic pattern identified is discussed in relation to current knowledge on origin of gradients of marine biodiversity toward the center of origin hypothesis in the Indo-West Pacific. PMID:25848970

  12. Repetitive DNAs highlight the role of chromosomal fusions in the karyotype evolution of Dascyllus species (Pomacentridae, Perciformes).

    PubMed

    Getlekha, Nuntaporn; Molina, Wagner Franco; de Bello Cioffi, Marcelo; Yano, Cassia Fernanda; Maneechot, Nuntiya; Bertollo, Luiz Antonio Carlos; Supiwong, Weerayuth; Tanomtong, Alongklod

    2016-04-01

    The Dascyllus genus consists of 11 species spread over vast regions of the Indo-Pacific, showing remarkable reductions in the diploid chromosome numbers (2n). The present study analyzed the karyotypes and other chromosomal characteristics of D. trimaculatus (2n = 48; 2st + 46a; NF = 50), D. carneus (2n = 48; 2st + 46a; NF = 50) and D. aruanus (2n = 30; 18m + 2st + 10a; NF = 50) from the Thailand Gulf (Pacific Ocean) and D. melanurus (2n = 48; 2st + 46a; NF = 50) from the Andaman Sea (Indian Ocean), employing conventional cytogenetic analyses and the chromosomal mapping of repetitive DNAs, using 18S and 5S rDNA, telomeric sequences and (CA)15, (GA)15, and (CAA)10 microsatellites as probes. The C-positive heterochromatin was found in the centromeric regions of most chromosomal pairs and 18S rDNA phenotypes were single in all species. However, in D. aruanus (2n = 30), which harbors nine metacentric pairs; the 5S rDNA sites were located in the centromeric region of the shortest one. The mapping of the telomeric sequences in D. aruanus revealed the presence of interstitial telomeric sites (ITS) in the centromeric region of four metacentric pairs, with one of these pairs also displaying an additional ITS in the long arms. Distinct chromosomal markers confirmed the reduction of the 2n by chromosomal fusions, highlighting the precise characterization of these rearrangements by the cytogenetic mapping of the repetitive DNAs. PMID:26932937

  13. Cotylogaster basiri Siddiqi & Cable, 1960 (Aspidobothrea: Aspidogastridae) in Pogonias cromis (Linnaeus, 1766) (Perciformes: Sciaenidae): first report from Brazil.

    PubMed

    Gallas, M; Silveira, E F; Périco, E

    2016-07-11

    Up until now, there have been few studies of the helminth fauna of Brazilian populations of Pogonias cromis. In North America, P. cromis is known to be a definitive host of Cotylogaster basiri, although there have been no reports of any species of Cotylogaster infecting fish in Brazil. During necropsies of marine fish obtained from professional fisherman in the state of Rio Grande do Sul, Brazil, specimens of C. basiri were found in the intestine and rectum of P. cromis. In comparison with previous studies, differences were found in relation to the number of lobes in the buccal disc and the development of the biocellate larvae in the eggs of C. basiri. This is the first report of C. basiri in P. cromis from Brazil, contributing to the understanding of the helminth fauna of this fish from the coastal zone of Brazil. PMID:27409226

  14. Feeding of introduced species of Cichla (Perciformes, Cichlidae) in Volta Grande reservoir, River Grande (MG/SP).

    PubMed

    Gomiero, L M; Braga, F M S

    2004-11-01

    Both species studied, Cichla cf. ocellaris and Cichla monoculus, fed mainly on fish, the first on Cichla spp., Plagioscion squamosissimus, and Tilapia rendalli, and the second, Cichla monoculus, on Cichla spp. Both diets indicated a strong correlation among the food items. Remarkable ontogenetic change was noted in both species diet: the young fed on crustaceans and insects while the adults fed mainly on fishes. The species studied, which are highly adapted to a brief life span, cause serious damage to the fish communities by predation, competition, and cascade effects throughout the whole trophic chain. PMID:15744419

  15. Shape changes and growth trajectories in the early stages of three species of the genus Diplodus (Perciformes, Sparidae).

    PubMed

    Loy, A; Bertelletti, M; Costa, C; Ferlin, L; Cataudella, S

    2001-10-01

    The larvae of three species of the genus Diplodus (Diplodus vulgaris, D. sargus, and D. puntazzo) colonize shallow waters along the Mediterranean coasts and, after a short period spent in the water column, they settle. For all three species this habitat transition is characterized by important shape changes mostly related to swimming capacity and feeding behavior. In this study, geometric morphometrics are used to characterize shape changes during the early juvenile life of specimens collected in a single locality in order to compare growth curves and allometric relationships. Size-related shape changes proved to be similar for all three species and are consistent with the ecological transition. A nonparametric smoothing technique (Loess) was used to fit the scatter of shape on size. The graphical representation (of most size-related shape variability) of this fitting technique shows how major shape changes are rapid for small sizes and slow down successively. The approach allows for the visualization of allometry and the fitting technique might help in defining the allometric growth pattern, thus contributing to the study of the autoecology of the species and in establishing terms for comparison with other ecologically or phylogenetically related species. PMID:11599013

  16. Evaluation of marking efficiency of different alizarin red S concentrations on body fish structures in Oreochromis niloticus (Perciformes: Cichlidae) juveniles.

    PubMed

    Ibáñez, Ana L; Rodríguez-Canto, Antonio; Cortés-Martínez, Jasmín; García-Calderón, José L

    2013-03-01

    The use of alizarin red S (ARS) marked tilapias could provide valuable fisheries management information to evaluate fish stocking events and may facilitate aquaculture management practices. As a new technique in fishes, the aim of this study was to compare and evaluate the chemical marks produced in tilapia juveniles by ARS through two treatments: 1) 12 hours of immersion and 2) immersion after osmotic induction. This was analyzed at three concentrations: 50, 75 and 100mg/l, and in three structures: otoliths, fish scales and caudal fin rays of Oreochromis niloticus juveniles. After three culture months 80% of specimens were analyzed and significant differences (p<0.05) in mark intensity were detected between treatments for otoliths and fin rays, but not for fish scales. Significant differences between concentrations were found for the 12h immersion treatment, while no significant differences were detected with osmotic induction. Our results showed that marks appeared at all concentrations, and none of the concentrations produced weak marks. Osmotic induction had a greater mortality than the 12h immersion procedure. After eight culture months the rest of the specimens were analyzed and the mark permanence was observed in all cases. According to the present results we recommend the marking process of 12h immersion treatment at 100mg/L concentration. PMID:23894973

  17. First cytogenetic report in Cichlasoma sanctifranciscense Kullander, 1983 (Perciformes, Cichlidae) from northeastern Brazil with inferences on chromosomal evolution of Cichlasomatini

    PubMed Central

    Argôlo, Leandro A.; Affonso, Paulo Roberto Antunes de Mello

    2015-01-01

    Abstract Even though genetic aspects of some cichlids have been widely studied over the last decades, little is known about the genomic structure of Cichlidae when compared to the large number of species in the family. In this paper, the first chromosomal data for Cichlasoma sanctifranciscense Kullander, 1983 are presented and discussed based on cytotaxonomic and karyoevolutionary inferences on Cichlasomatini. All individuals shared a diploid number of 2n=48 distributed as 10sm+28st+10a and Ag-NORs on short arms of a submetacentric pair. Heterochromatin was detected at pericentromeric regions of most chromosomes and at terminal sites of a few pairs. GC-rich regions were observed on short arms of two biarmed pairs, including the pair bearing Ag-NORs. Double-FISH with ribosomal probes revealed 18S rDNA clusters coincident with GC-rich regions in two biarmed pairs and 5S rDNA at interstitial location of an acrocentric pair. Cichlasoma sanctifranciscense shares some symplesiomorphic traits described in Cichlidae (2n=48 and pericentromeric C-bands) while other chromosomal features diverge from the common trend reported in Cichlasomatini, such as multiple 18S rDNA sites combined with high FN values. Finally, the present results are useful to support taxonomic identification once species-specific markers have been provided in Cichlasoma sanctifranciscense. PMID:26753082

  18. Parasite community of Cichla kelberi (Perciformes, Cichlidae) in the Três Marias Reservoir, Minas Gerais, Brazil.

    PubMed

    Santos-Clapp, Michelle Daniele; Brasil-Sato, Marilia Carvalho

    2014-01-01

    A total of 112 specimens of yellow peacock bass, Cichla kelberi, were collected in the Três Marias Reservoir, upper São Francisco River, State of Minas Gerais, between 2004 and 2005. Twelve species of parasites were collected: two species of ectoparasites (the monogenetic Gussevia sp. and the copepod Ergasilus sp.); and ten species of endoparasites, including four species of adult endoparasites: the cestodes Proteocephalus macrophallus and P. microscopicus, and the nematodes: Capillostrongyloides sentinosa and Rhabdochona acuminata, and six species of larval endoparasites: the metacercariae of Austrodiplostomum compactum and the nematodes: Hysterothylacium sp., Contracaecum sp. Type 1, Procamallanus (Spirocamallanus) inopinatus, Spiroxys sp., and Goezia sp.. A significant positive correlation in the abundance of the two adult endoparasites species, P. macrophallus and P. microscopicus, may indicate that such associated species had the same ecological requirements. The positive correlations between the prevalence of the larval endoparasites, Hysterothylacium sp. and A. compactum, may indicate that there was opportunism for the two generalists species. Ergasilus sp., C. sentinosa, R. acuminata and Hysterothylacium sp. were recorded for the first time in C. kelberi, and this increased their list of known hosts. In addition, both proteocephalid species and C. sentinosa can extend their known biogeographical distribution to the Três Marias Reservoir. PMID:25271458

  19. A new species of Coryogalops (Perciformes: Gobiidae) and the first adult record of Feia nympha from the Red Sea.

    PubMed

    Kovačić, Marcelo; Bogorodsky, Sergey V; Mal, Ahmad O

    2016-01-01

    A new species of the gobiid genus Coryogalops, C. nanus sp. nov. is described from the Red Sea. Coryogalops nanus sp. nov. is distinguished from congeners in having dorsal-fin rays VI + I,10; anal-fin rays I,9; pectoral-fin rays 12-14 (lowest count known for the genus), two upper rays with free tips; pelvic fins I,5, joined to form an emarginate disc, no pelvic frenum; predorsal area and narrow area at base of first dorsal fin naked; longitudinal scale series 26-29; transverse scale rows counted forward 6-7; transverse scale rows counted backward 7-8; circumpeduncular scale rows 11-12; seven transverse suborbital rows of sensory papillae; no tentacle above upper eye margin; anterior nostril tubular, without flap at its tip, posterior nostril pore-like; body semitranslucent, covered with small scattered orange-yellow spots and speckles, those in predorsal area contain black dots; an internal row of white spots along ventral part of body above anal-fin base and on caudal peduncle; head with small scattered orange to yellowish brown spots; first dorsal fin with two broad white bands at base of fin and distally, and with hyaline area densely dotted with melanophores in the middle of fin; preserved specimens opaque white to yellowish with sparse melanophores. An adult specimen of Feia nympha is recorded for the first time in the Red Sea and the lateral line system of this species is described. PMID:27394550

  20. Evaluation of cytochrome b mtDNA sequences in genetic diversity studies of Channa marulius (Channidae: Perciformes).

    PubMed

    Habib, Maria; Lakra, W S; Mohindra, Vindhya; Khare, Praveen; Barman, A S; Singh, Akanksha; Lal, Kuldeep K; Punia, Peyush; Khan, Asif A

    2011-02-01

    Channa marulius (Hamilton, 1822) is a commercially important freshwater fish and a potential candidate species for aquaculture. The present study evaluated partial Cytochrome b gene sequence of mtDNA for determining the genetic variation in wild populations of C. marulius. Genomic DNA extracted from C. marulius samples (n = 23) belonging to 3 distant rivers; Mahanadi, Teesta and Yamuna was analyzed. Sequencing of 307 bp Cytochrome b mtDNA fragment revealed the presence of 5 haplotypes with haplotype diversity value of 0.763 and nucleotide diversity value of 0.0128. Single population specific haplotype was observed in Mahanadi and Yamuna samples and 3 haplotypes in Teesta samples. The analysis of data demonstrated the suitability of partial Cytochrome b sequence in determining the genetic diversity in C. marulius population. PMID:20443065

  1. Somatic growth effects of intramuscular injection of growth hormone in androgen-treated juvenile Nile tilapia, Oreochromis niloticus (Perciformes: Cichlidae).

    PubMed

    Liñán-Cabello, Marco A; Robles-Basto, Cindy M; Mena-herrera, Alfredo

    2013-03-01

    Little is known about the effects of the interaction of growth hormone (GH) with 17 alpha-methyltestosterone (17-MT) during fish growth. We evaluated this in the present study to assess the effect on fish growth. Fish in two batches of juvenile tilapia (Oreochromis niloticus) (approximately 5.0cm in length) were randomly assigned in triplicate to three treatments and a control group, distributed among 12 fiberglass tanks of 1 000L capacity (50 fish per tank) in an experiment covering a period of six weeks. The experimental groups were: a) fish treated with 17-MT and GH in mineral oil (RGH); b) fish treated with 17-MT and mineral oil without the addition of GH (R); c) fish treated with GH in mineral oil but not 17-MT (NGH); and d) fish of the control group, which were treated with mineral oil but not 17-MT or GH (N). The GH was injected into the fish at a rate of 0.625mg/g body weight. Morphometric data were recorded at the beginning of the experiment (T0) and at 15, 30 and 45 days (T15, T30 and T45), and various indicators of growth were assessed: condition factor (K); survival percentage (S), feed conversion rate (FCR), percentage weight gain (WG) and (v) daily weight gain. The optimum dietary level was calculated assuming 5% food conversion to total weight in each group. During the experiment, the fish were provided with a commercial food containing 45% protein. The data showed that GH injection resulted in a greater weight gain in fish treated with 17-MT (the RGH treatment group), being particularly significant increase in weight during T15 and T30 (p<0.05). High values of K were found in the R and RGH treatments during the initial days of the experiment, which may have been a consequence of the better nutritional status affecting both weight gain and growth in body length, as a result of the additive effects of 17-MT and GH. The fish in groups not treated with 17-MT and treated with 17-MT and added GH showed greater increases in WG per day, higher K values and lower FCRs than fish in the other groups, which suggests that greater feed efficiency occurred in the hormone-treated fish. Fish in the RGH treatment showed the most growth, suggesting a possible interaction between 17-MT and injected GH. PMID:23894974

  2. A new species of the genus Scolopsis Cuvier, 1830 (Perciformes: Nemipteridae) from southern India and Sri Lanka.

    PubMed

    Mishra, S S; Biswas, Sudeepta; Russell, Barry C; Satpathy, K K; Selvanayagam, M

    2013-01-01

    Scolopsis igcarensis, a new species of monocle bream (family Nemipteridae) from the coastal waters of southern India and Sri Lanka is described. The species is distinguished from other species of the genus Scolopsis by a combination of the following characters: scales on top of head reaching forward to between anterior nostril and snout tip; lower margin of eye below the line from snout tip to upper pectoral fin base; a bony ridge below eye; a white band from behind eye to level of end of dorsal fin base. PMID:24699607

  3. Tormopsolus orientalis Yamaguti, 1934 (Digenea: Acanthocolpidae) from Seriola dumerili (Risso) (Perciformes: Carangidae) in the western Mediterranean Sea.

    PubMed

    Bartoli, Pierre; Bray, Rodney A; Montero, Francisco E

    2004-03-01

    Tormopsolus orientalis Yamaguti, 1934, is redescribed from Seriola dumerili from off Corsica, Majorca and Aguilas, SE Spain. The vitellarium is interrupted at the level of the ovary and both testes, and a bipartite seminal vesicle is found in many specimens. Oral sucker papillae are always seen. Type-specimens and voucher specimens from off Japan, Bermuda, Panama, Curaçao and the Great Barrier Reef have been compared with the Mediterranean species. Specimens of T. medius Reimer, 1983, from Mozambique have been studied and this species is synonymised with T. orientalis. PMID:15010594

  4. Molecular systematics of the Jacks (Perciformes: Carangidae) based on mitochondrial cytochrome b sequences using parsimony, likelihood, and Bayesian approaches.

    PubMed

    Reed, David L; Carpenter, Kent E; deGravelle, Martin J

    2002-06-01

    The Carangidae represent a diverse family of marine fishes that include both ecologically and economically important species. Currently, there are four recognized tribes within the family, but phylogenetic relationships among them based on morphology are not resolved. In addition, the tribe Carangini contains species with a variety of body forms and no study has tried to interpret the evolution of this diversity. We used DNA sequences from the mitochondrial cytochrome b gene to reconstruct the phylogenetic history of 50 species from each of the four tribes of Carangidae and four carangoid outgroup taxa. We found support for the monophyly of three tribes within the Carangidae (Carangini, Naucratini, and Trachinotini); however, monophyly of the fourth tribe (Scomberoidini) remains questionable. A sister group relationship between the Carangini and the Naucratini is well supported. This clade is apparently sister to the Trachinotini plus Scomberoidini but there is uncertain support for this relationship. Additionally, we examined the evolution of body form within the tribe Carangini and determined that each of the predominant clades has a distinct evolutionary trend in body form. We tested three methods of phylogenetic inference, parsimony, maximum-likelihood, and Bayesian inference. Whereas the three analyses produced largely congruent hypotheses, they differed in several important relationships. Maximum-likelihood and Bayesian methods produced hypotheses with higher support values for deep branches. The Bayesian analysis was computationally much faster and yet produced phylogenetic hypotheses that were very similar to those of the maximum-likelihood analysis. PMID:12099802

  5. Bucephalidae (Digenea) from epinephelines (Serranidae: Perciformes) from the waters off New Caledonia, including Neidhartia lochepintade n. sp.

    PubMed Central

    2013-01-01

    Many bucephalid species, mainly of the subfamily Prosorhynchinae, have been described from epinepheline serranids (groupers) throughout the World’s Oceans. In this paper eight named prosorhynchine species are described and/or illustrated from epinepheline fishes from New Caledonia. Neidhartia lochepintade n. sp. in Epinephelus chlorostigma differs from other Neidhartia spp. in various combinations of distinct body-size, rhynchus size, previtelline and pre-mouth distance, post-testicular distance, cirrus-sac reach and egg-size. Other species are: Neidhartia haywardi Bott, Miller & Cribb, 2013 in Plectropomus leopardus; Neidhartia tyleri Bott, Miller & Cribb, 2013 in Plectropomus leopardus and Plectropomus laevis; Prosorhynchus freitasi Nagaty, 1937 in Plectropomus leopardus and Plectropomus laevis; Prosorhynchus robertsthomsoni Bott & Cribb, 2009 in Cephalopholis argus; Prosorhynchus longisaccatus Durio & Manter, 1968 in Cephalopholis urodeta, Epinephelus areolatus, Epinephelus cyanopodus and Epinephelus maculatus. Prosorhynchus luzonicus Velasquez, 1959 and Prosorhynchus sp. B. in Epinephelus coioides; Prosorhynchus serrani Durio & Manter, 1968 in Variola albimarginata and Variola louti; Prosorhynchus sp. A in Epinephelus morrhua; Prosorhynchus sp. immature in Epinephelus coeruleopunctatus. The new combination Neidhartia longivesicula (Bilqees, Khalil, Khan, Perveen & Muti-ur-Rehman, 2009) (Syn. Prosorhynchus longivesicula) is formed. Evidence from this paper and earlier molecular studies indicates that there are numerous morphologically similar prosorhynchine species in serranids, most of which show a high degree of host-specificity. PMID:24351242

  6. When two equals three: developmental osteology and homology of the caudal skeleton in carangid fishes (Perciformes: Carangidae).

    PubMed

    Hilton, Eric J; Johnson, G David

    2007-01-01

    Ontogeny often provides the most compelling evidence for primary homology in evolutionary developmental studies and is critical to interpreting complex structures in a phylogenetic context. As an example of this, we document the ontogenetic development of the caudal skeleton of Caranx crysos by examining a series of cleared and stained larval and postlarval specimens. By studying ontogeny, we are able to more accurately identify some elements of the adult caudal skeleton than is possible when studying the adult stage alone. The presence of two epurals has been used as a synapomorphy of Caranginae (homoplastically present in the scomberoidine genera Scomberoides and Oligoplites). Here we find that three epurals (ep) are present in larvae and small postlarval juveniles (i.e.,<25 mm standard length [SL]) of C. crysos and other carangines, but ep2 never ossifies and does not develop beyond its initial presence. Ep2 was last observed in a 33.6 mm SL specimen as a small nodule of very lightly stained cartilage cells and eventually disappears completely. Therefore, the two epurals present in the adult are ep1 and ep3. In other carangines examined (e.g., Selene, Selar), the rudimentary ep2 ossifies and appears to fuse to the proximal tip of ep1. In these taxa, therefore, the two epurals of the adult appear to be ep1+2 and ep3. We found no indication of three epurals at any stage in the development of Oligoplites (developmental material of Scomberoides was unavailable). We discuss the osteology of the caudal skeleton of carangoid fishes generally and emphasize the power and importance of ontogeny in the identification of primary homology. PMID:17371400

  7. Redescription of Parapercis okamurai Kamohara, 1960 (Perciformes: Pinguipedidae), based on specimens newly collected from Taiwan and Japan.

    PubMed

    Ho, Hsuan-Ching

    2014-01-01

    A rare species of sandperch, Parapercis okamurai, is redescribed based on 2 types and 15 specimens newly collected from Taiwan and Japan. The species is unique in having cycloid scales on the parietal, opercle and subopercle, except for few large ctenoid scale that covers the base of the opercular spine; body color yellowish dorsally, with 10 or 11 faint yellow bands on lateral body and pale ventrally; and black spots on inner side of upper pectoral fin base. It can also be distinguished from congeners by having a combination of the following characters: dorsal-fin rays V, 23; anal-fin rays I, 19; pectoral-fin rays 18; pored lateral-line scales 59-64; medial predorsal scales 9-10; transverse scale rows 4.5-5.5/14-15; circumpeduncular scales 20-21; gill raker4-5+9-10=13-16; -4 pairs of canine teeth at front of lower jaw; 2-4 rows of teeth on vomer; 2 rows of teeth on palatines; scales on cheek moderately large, each half embedded; and body color yellowish dorsally and a prominent ocellus at upper caudal-fin base. PMID:25283124

  8. An ovary transcriptome for all maturational stages of the striped bass (Morone saxatilis), a highly advanced perciform fish

    PubMed Central

    2012-01-01

    Background The striped bass and its relatives (genus Morone) are important fisheries and aquaculture species native to estuaries and rivers of the Atlantic coast and Gulf of Mexico in North America. To open avenues of gene expression research on reproduction and breeding of striped bass, we generated a collection of expressed sequence tags (ESTs) from a complementary DNA (cDNA) library representative of their ovarian transcriptome. Results Sequences of a total of 230,151 ESTs (51,259,448 bp) were acquired by Roche 454 pyrosequencing of cDNA pooled from ovarian tissues obtained at all stages of oocyte growth, at ovulation (eggs), and during preovulatory atresia. Quality filtering of ESTs allowed assembly of 11,208 high-quality contigs ≥ 100 bp, including 2,984 contigs 500 bp or longer (average length 895 bp). Blastx comparisons revealed 5,482 gene orthologues (E-value < 10-3), of which 4,120 (36.7% of total contigs) were annotated with Gene Ontology terms (E-value < 10-6). There were 5,726 remaining unknown unique sequences (51.1% of total contigs). All of the high-quality EST sequences are available in the National Center for Biotechnology Information (NCBI) Short Read Archive (GenBank: SRX007394). Informative contigs were considered to be abundant if they were assembled from groups of ESTs comprising ≥ 0.15% of the total short read sequences (≥ 345 reads/contig). Approximately 52.5% of these abundant contigs were predicted to have predominant ovary expression through digital differential display in silico comparisons to zebrafish (Danio rerio) UniGene orthologues. Over 1,300 Gene Ontology terms from Biological Process classes of Reproduction, Reproductive process, and Developmental process were assigned to this collection of annotated contigs. Conclusions This first large reference sequence database available for the ecologically and economically important temperate basses (genus Morone) provides a foundation for gene expression studies in these species. The predicted predominance of ovary gene expression and assignment of directly relevant Gene Ontology classes suggests a powerful utility of this dataset for analysis of ovarian gene expression related to fundamental questions of oogenesis. Additionally, a high definition Agilent 60-mer oligo ovary 'UniClone' microarray with 8 × 15,000 probe format has been designed based on this striped bass transcriptome (eArray Group: Striper Group, Design ID: 029004). PMID:22353237

  9. Haliotrematoides spp. (Monogenoidea: Dactylogyridae) infecting the gills of grunts (Perciformes: Haemulidae) from the southern coast of Quintana Roo, Mexico.

    PubMed

    Mendoza-Franco, Edgar F; Reyes-Lizama, C; González-Solís, D

    2009-12-01

    One previously described species, Haliotrema striatohamus Zhukov, 1981, found off the coast of Cuba and Campeche (Gulf of Mexico), is redescribed and transferred to Haliotrematoides Kritsky, Yang and Sun, 2009, as Haliotrematoides striatohamus ( Zhukov, 1981) n. comb. This transfer is based on the study of new specimens of this species found in the gill lamellae of grunts, i.e., Haemulon aurolineatum Cuvier, Haemulon plumierii (Lacepède), and Haemulon sciurus (Shaw) (Haemulidae), all from the southern coast of Quintana Roo, Mexico. In addition, another previously described species, Haliotrema brevispirocirrus Zhukov, 1981 from Haemulon striatum (Linnaeus) from Havana, Cuba, is also transferred to Haliotrematoides based on the comparative morphology of its original description. Data are provided for prevalence and mean intensity as well as for the morphologic and biometric variability of H. striatohamus from different hosts. The new replacement of H. striatohamus ( Zhukov, 1981) n. comb. and H. brevispirocirrus (Zhukov, 1981) n. comb. infecting these taxa represents the first known species of Haliotrematoides on these fishes and new geographical records for these dactylogyrid monogenoids. PMID:19463040

  10. Genomic Organization of Repetitive DNA Elements and Its Implications for the Chromosomal Evolution of Channid Fishes (Actinopterygii, Perciformes).

    PubMed

    Cioffi, Marcelo de Bello; Bertollo, Luiz Antonio Carlos; Villa, Mateo Andres; de Oliveira, Ezequiel Aguiar; Tanomtong, Alongklod; Yano, Cassia Fernanda; Supiwong, Weerayuth; Chaveerach, Arunrat

    2015-01-01

    Channid fishes, commonly referred to as "snakeheads", are currently very important in Asian fishery and aquaculture due to the substantial decline in natural populations because of overexploitation. A large degree of chromosomal variation has been found in this family, mainly through the use of conventional cytogenetic investigations. In this study, we analyzed the karyotype structure and the distribution of 7 repetitive DNA sequences in several Channa species from different Thailand river basins. The aim of this study was to investigate the chromosomal differentiation among species and populations to improve upon the knowledge of its biodiversity and evolutionary history. Rearrangements, such as pericentric inversions, fusions and polyploidization, appear to be important events during the karyotypic evolution of this genus, resulting in the chromosomal diversity observed among the distinct species and even among populations of the same species. In addition, such variability is also increased by the genomic dynamism of repetitive elements, particularly by the differential distribution and accumulation of rDNA sequences on chromosomes. This marked diversity is likely linked to the lifestyle of the snakehead fishes and their population fragmentation, as already identified for other fish species. The karyotypic features highlight the biodiversity of the channid fishes and justify a taxonomic revision of the genus Channa, as well as of the Channidae family as a whole, as some nominal species may actually constitute species complexes. PMID:26067030

  11. [Growth, mortality and exploitation rate of Priacanthus arenatus (Perciformes: Priacanthidae), in the trawl fisheries of northeast Venezuela].

    PubMed

    Toledo, J; Mendoza, J; Marcano, L

    2000-12-01

    We analyzed growth, mortality and exploitation rate of Priacanhus arenatus, captured by the shrimp trawling fishery (1989-1996), in northeastern Venezuela. The growth coefficient (K) and the asymptotic length (L8) were estimated by length-frequency data using the Battacharya method and other routines of the FISAT program. Total mortality (Z) and exploitation (E) rates were obtained by length-converted catch curve analysis, based on length-frequency data, and the Berverton and Holt's yield per recruit model, respectively. The mean growth parameters L and K were estimated as 474.7 mm and 0.69 year(-1), respectively. Mean total mortality was 4.03 and the exploitation rate range was 0.70-0.80. Results indicated that the population is overexploited. PMID:15272462

  12. Actinobdella inequinnulata (Annelida: Hirudinida:Rhynchobdellida:Glossiphoniidae) from White Crappie, Pomoxis annularis (Perciformes: Centrarchidae), in Arkansas, USA

    EPA Science Inventory

    One of 4 (25%) white crappie, Pomoxis annularis from the Ouachita River, Dallas County, Arkansas, was found to be infested with 8 glossiphoniid leeches, Actinobdella inequiannulata Moore, 1901. Leeches were removed from within the oeprculum on gills and gill arches. This leech i...

  13. Growth, mortality and reproduction of the blue tilapia Oreochromis aureus (Perciformes: Cichlidae) in the Aguamilpa Reservoir, Mexico.

    PubMed

    Peña Messina, Emilio; Tapia Varela, Raul; Velázquez Abunader, José Iván; Orbe Mendoza, Alma Araceli; Velazco Arce, Javier Marcial de Jesús Ruiz

    2010-12-01

    Tilapia production has increased in Aguamilpa Reservoir, in Nayarit, Mexico, in the last few years and represents a good economic activity for rural communities and the country. We determined growth parameters, mortality and reproductive aspects for 2413 specimens of blue tilapia Oreochromis aureus in this reservoir. Samples were taken monthly from July 2000 through June 2001, of which 1 371 were males and 1 042 were females. Standard length (SL) and total weight (TW) were measured in each organism. The SL/TW relationships through power models for sexes were determined. The growth parameters L infinity k, and t0 of the von Bertalanffy equation were estimated using frequency distribution of length through ELEFAN-I computer program. Finally the reproductive cycle and size of first maturity were established using morph chromatic maturity scale. The results suggested that the males and females had negative allometric growth (b < 3). Significant differences were found between SL/TW model for the sexes, suggesting separate models for males and females. Results indicate that there are no differences in growth rates between sexes; the proposed parameters were L infinity = 43.33 cm standard length, k = 0.36/year and t0 = -0.43 years. Natural and fishing mortality coefficients were 0.83/year and 1.10/year, respectively. The estimated exploitation rate (0.57/year) suggested that during the study period the fishery showed signs of overfishing. Blue tilapia reproduces year-round; the highest activity occurs from January through May and size of first maturity was 23 cm SL. We conclude that it is necessary to establish a minimum catch size in this reservoir based on the reproductive behavior of this species. PMID:21247004

  14. [Trophic range of tilapia Oreochromis aureus (Perciformes: Cichlidae) in Infiernillo dam, Michoacán-Guerrero, Mexico].

    PubMed

    Jiménez-Badillo, M L; Nepita-Villanueva, M R

    2000-01-01

    The trophic spectrum of tilapia Oreochromis aureus (Steindachner 1864), was determined by stomach content analysis in 153 organisms collected during 1993 in Michoacán-Guerrero, México. The feeding status of the fish at the time of observation was evaluated by the examination of fat surrounding the gut, gastric replection and the condition coefficient. The quantitative evaluation of the food items was carried out by the combination of the following analysis: Frequency of Occurrence, Volumetric Method, Volumetric Mean Index and Relative Importance Index. Diet consisted of: detritus and vascular plant residues as a primary food; unicellular algae as secondary food; and remains of insects and fish, graminean seeds, filamentous algae, cladocerans, ostracods, rotifers and copepods as occasional food. We detected a difference in food preferences between juveniles and adults and a variation in the consumption proportions of some food items during the rainy and dry seasons. Thus, we concluded that O. aureus is an omnivorous species with preference for detritus and vascular plant remain. Feeding seems to be determined by the abundance of food items found in the habitat and adults showed a trend to eat only detritus. Feeding does not seem to be a limiting factor in the development of the tilapia in Infiernillo dam. PMID:11354955

  15. Nonmonotonic response of vitellogenin and estrogen receptor α gene expression after octylphenol exposure of Cichlasoma dimerus (Perciformes, Cichlidae).

    PubMed

    Genovese, G; Regueira, M; Da Cuña, R H; Ferreira, M F; Varela, M L; Lo Nostro, F L

    2014-11-01

    In oviparous vertebrates, vitellogenin (VTG) is mainly produced by the liver in response to estrogen (E2) and its synthesis is traditionally coupled to estrogen receptor alpha induction. Even though VTG is a female-specific protein, chemicals that mimic natural estrogens, known as xenoestrogens, can activate its expression in males causing endocrine disruption to wildlife and humans. Alkylphenols such as nonylphenol (NP) and octylphenol (OP) are industrial additives used in the manufacture of a wide variety of plastics and detergents, and can disrupt endocrine functions in exposed animals. For more than a decade, the freshwater cichlid fish Cichlasoma dimerus has been used for ecotoxicological studies in our laboratory. We recently found an up-regulation of VTG gene expression in livers of male fish exposed to OP, from a silent state to values similar to those of E2-induced fish. To better understand the underlying mechanisms behind the action of xenoestrogens, the aim of this study was to analyze the dose-response relationship of C. dimerus VTG and estrogen receptors (ERs) gene expression after waterborne exposure to 0.15, 1.5, 15, and 150μg/L OP for up to 1 month (0, 1, 3, 7, 14, 21, and 28 days). At the end of the experiment, histological features of exposed fish included active hepatocytes with basophilic cytoplasm and high eosinophilic content in their vascular system due to augmented expression of VTG. In testis, high preponderance of sperm was found in fish exposed to 150μg/L OP. A classic dose-response down-regulation of the expression of Na(+)/K(+)-ATPase, a "non-gender specific gene" used for comparison, was found with increasing OP concentrations. No VTG and very low levels of ERα were detected in control male livers, but an up-regulation of both genes was found in males exposed to 0.15 or 150μg/L OP. Moreover, VTG transcripts were significant as early as day 3 or day 1 of exposure to these OP concentrations, respectively. Nearly no response was detected in 1.5 and 15μg/L OP exposed-fish. Data was curve-fitted evidencing a nonmonotonic dose-response curve. Interestingly, ERβ2 mRNA expression was augmented above baseline levels only when males were exposed to the lowest OP concentration. We speculate that genomic control of vitellogenesis is under control of multiple steroid receptors with different affinities for ligands. ERβ isoform, only up-regulated with very low concentrations of ligand, would act as a sensors of OP (or E2) to induce ERα and VTG. With high OP concentrations, the expression of ERα isoform is promptly augmented, with the concomitant VTG transactivation. PMID:25146234

  16. A comprehensive description and evolutionary analysis of 22 grouper (perciformes, epinephelidae) mitochondrial genomes with emphasis on two novel genome organizations.

    PubMed

    Zhuang, Xuan; Qu, Meng; Zhang, Xiang; Ding, Shaoxiong

    2013-01-01

    Groupers of the family Epinephelidae are a diverse and economically valuable group of reef fishes. To investigate the evolution of their mitochondrial genomes we characterized and compared these genomes among 22 species, 17 newly sequenced. Among these fishes we identified three distinct genome organizations, two of them never previously reported in vertebrates. In 19 of these species, mitochondrial genomes followed the typical vertebrate canonical organization with 13 protein-coding genes, 22 tRNAs, two rRNAs, and a non-coding control region. Differing from this, members of genus Variola have an extra tRNA-Ile between tRNA-Val and 16S rRNA. Evidence suggests that this evolved from tRNA-Val via a duplication event due to slipped strand mispairing during replication. Additionally, Cephalopholisargus has an extra tRNA-Asp in the midst of the control region, likely resulting from long-range duplication of the canonical tRNA-Asp through illicit priming of mitochondrial replication by tRNAs. Along with their gene contents, we characterized the regulatory elements of these mitochondrial genomes' control regions, including putative termination-associated sequences and conserved sequence blocks. Looking at the mitochondrial genomic constituents, rRNA and tRNA are the most conserved, followed by protein-coding genes, and non-coding regions are the most divergent. Divergence rates vary among the protein-coding genes, and the three cytochrome oxidase subunits (COI, II, III) are the most conserved, while NADH dehydrogenase subunit 6 (ND6) and the ATP synthase subunit 8 (ATP8) are the most divergent. We then tested the phylogenetic utility of this new mt genome data using 12 protein-coding genes of 48 species from the suborder Percoidei. From this, we provide further support for the elevation of the subfamily Epinephelinae to family Epinephelidae, the resurrection of the genus Hyporthodus, and the combination of the monotypic genera Anyperodon and Cromileptes to genus Epinephelus, and Aethaloperca to genus Cephalopholis. PMID:23951357

  17. Bucephalidae (Digenea) from epinephelines (Serranidae: Perciformes) from the waters off New Caledonia, including Neidhartia lochepintade n. sp.

    PubMed

    Bray, Rodney A; Justine, Jean-Lou

    2013-01-01

    Many bucephalid species, mainly of the subfamily Prosorhynchinae, have been described from epinepheline serranids (groupers) throughout the World's Oceans. In this paper eight named prosorhynchine species are described and/or illustrated from epinepheline fishes from New Caledonia. Neidhartia lochepintade n. sp. in Epinephelus chlorostigma differs from other Neidhartia spp. in various combinations of distinct body-size, rhynchus size, previtelline and pre-mouth distance, post-testicular distance, cirrus-sac reach and egg-size. Other species are: Neidhartia haywardi Bott, Miller & Cribb, 2013 in Plectropomus leopardus; Neidhartia tyleri Bott, Miller & Cribb, 2013 in Plectropomus leopardus and Plectropomus laevis; Prosorhynchus freitasi Nagaty, 1937 in Plectropomus leopardus and Plectropomus laevis; Prosorhynchus robertsthomsoni Bott & Cribb, 2009 in Cephalopholis argus; Prosorhynchus longisaccatus Durio & Manter, 1968 in Cephalopholis urodeta, Epinephelus areolatus, Epinephelus cyanopodus and Epinephelus maculatus. Prosorhynchus luzonicus Velasquez, 1959 and Prosorhynchus sp. B. in Epinephelus coioides; Prosorhynchus serrani Durio & Manter, 1968 in Variola albimarginata and Variola louti; Prosorhynchus sp. A in Epinephelus morrhua; Prosorhynchus sp. immature in Epinephelus coeruleopunctatus. The new combination Neidhartia longivesicula (Bilqees, Khalil, Khan, Perveen & Muti-ur-Rehman, 2009) (Syn. Prosorhynchus longivesicula) is formed. Evidence from this paper and earlier molecular studies indicates that there are numerous morphologically similar prosorhynchine species in serranids, most of which show a high degree of host-specificity. PMID:24351242

  18. Gene rearrangements and evolution of tRNA pseudogenes in the mitochondrial genome of the parrotfish (Teleostei: Perciformes: Scaridae).

    PubMed

    Mabuchi, Kohji; Miya, Masaki; Satoh, Takashi P; Westneat, Mark W; Nishida, Mutsumi

    2004-09-01

    Genomic size of animal mitochondrial DNA is usually minimized over time. Thus, when regional duplications occur, they are followed by a rapid elimination of redundant material. In contrast to this general view, we report here long-sustained tRNA pseudogenes in the mitochondrial genome (mitogenome) of teleost fishes of the family Scaridae (parrotfishes). During the course of a molecular phylogenetic study of the suborder Labroidei, we determined the complete nucleotide sequence of the mitogenome for a parrotfish, Chlorurus sordidus, and found a gene rearrangement accompanied by a tRNA pseudogene. In the typical gene order of vertebrates, a tRNA-gene cluster between ND1 and ND2 genes includes tRNA(Ile) (I), tRNA(Gln) (Q), and tRNA(Met) (M) genes in this order (IQM). However, in the mitogenome of the parrotfish, the tRNA(Met) gene was inserted between the tRNA(Ile) and the tRNA(Gln) genes, and the tRNA(Gln) gene was followed by a putative tRNA(Met) pseudogene (psiM). Such a tRNA gene rearrangement including a pseudogene (IMQpsiM) was found in all of the 10 examined species, representing 7 of the 10 currently recognized scarid genera. All sister groups examined (20 species of Labridae and a single species of Odacidae) had the typical gene order of vertebrate mitogenomes. Phylogenetic analysis of the tRNA(Met) genes and the resulting pseudogenes demonstrated that the ancestral tRNA(Met) gene was duplicated in a common ancestor of the parrotfish. Based on the fossil record, these results indicate that the pseudogenes have survived at least 14 million years. Most of the vertebrate mitochondrial gene rearrangements involving the IQM region have held the tRNA(Met) gene just upstream of the ND2 gene, and even in a few exceptional cases, including the present ones, the tRNA pseudogenes have been found in that position. In addition, most of these tRNA(Met) pseudogenes maintained clover-leaf secondary structures, with the remainder sustaining the clover-leaf structure in the "top half (TpsiC and acceptor arms). Considering their potential secondary structures (holding "top halves" of the clover-leaf structures), locations within mitogenomes (flanking the 5' ends of the ND2 genes) and stabilities over time (survived at least 14 Myr), it is likely that the tRNA pseudogenes retain function as punctuation marks for mitochondrial ND2 mRNA processing. PMID:15553084

  19. Niche partitioning of feeding microhabitats produces a unique function for herbivorous rabbitfishes (Perciformes, Siganidae) on coral reefs

    NASA Astrophysics Data System (ADS)

    Fox, R. J.; Bellwood, D. R.

    2013-03-01

    Niche theory predicts that coexisting species minimise competition by evolving morphological or behavioural specialisations that allow them to spread out along resource axes such as space, diet and temporal activity. These specialisations define how a species interacts with its environment and, by extension, determine its functional role. Here, we examine the feeding niche of three species of coral reef-dwelling rabbitfishes (Siganidae, Siganus). By comparing aspects of their feeding behaviour (bite location, bite rate, foraging distance) with that of representative species from two other abundant herbivorous fish families, the parrotfishes (Labridae, Scarus) and surgeonfishes (Acanthuridae, Acanthurus), we examine whether rabbitfishes have a feeding niche distinct from other members of the herbivore guild. Measurements of the penetration of the fishes' snouts and bodies into reef concavities when feeding revealed that rabbitfish fed to a greater degree from reef crevices and interstices than other herbivores. There was just a 40 % overlap in the penetration-depth niche between rabbitfish and surgeonfish and a 45 % overlap between rabbitfish and parrotfish, compared with the almost complete niche overlap (95 %) recorded for parrotfish and surgeonfish along this spatial niche axis. Aspects of the morphology of rabbitfish which may contribute to this niche segregation include a comparatively longer, narrower snout and narrower head. Our results suggest that sympatric coexistence of rabbitfish and other reef herbivores is facilitated by segregation along a spatial (and potentially dietary) axis. This segregation results in a unique functional role for rabbitfishes among roving herbivores that of "crevice-browser": a group that specifically feeds on crevice-dwelling algal or benthic organisms. This functional trait may have implications for reef ecosystem processes in terms of controlling the successional development of crevice-based algal communities, reducing their potential to trigger macroalgal outbreaks.

  20. Description of a new weakfish, Cynoscion nortoni, from Ecuador with a note on the distribution of Umbrina bussingi (Perciformes: Sciaenidae).

    PubMed

    Béarez, P

    2001-07-01

    A new sciaenid was found at a fish market on the Ecuadorian coast. Cynoscion nortoni, described from 11 specimens, is characterised by a relatively large eye, a long head and pectoral fin, a high dorsal fin-ray count and a dark, steel grey colour on its dorsum. The specimens were captured over the continental shelf with a long line at depths between 100 and 200 meters. Another deep water species, Umbrina bussingi, is recorded for the first time from southern Colombia. PMID:15260154

  1. First cytogenetic report in Cichlasoma sanctifranciscense Kullander, 1983 (Perciformes, Cichlidae) from northeastern Brazil with inferences on chromosomal evolution of Cichlasomatini.

    PubMed

    Argôlo, Leandro A; Affonso, Paulo Roberto Antunes de Mello

    2015-01-01

    Even though genetic aspects of some cichlids have been widely studied over the last decades, little is known about the genomic structure of Cichlidae when compared to the large number of species in the family. In this paper, the first chromosomal data for Cichlasoma sanctifranciscense Kullander, 1983 are presented and discussed based on cytotaxonomic and karyoevolutionary inferences on Cichlasomatini. All individuals shared a diploid number of 2n=48 distributed as 10sm+28st+10a and Ag-NORs on short arms of a submetacentric pair. Heterochromatin was detected at pericentromeric regions of most chromosomes and at terminal sites of a few pairs. GC-rich regions were observed on short arms of two biarmed pairs, including the pair bearing Ag-NORs. Double-FISH with ribosomal probes revealed 18S rDNA clusters coincident with GC-rich regions in two biarmed pairs and 5S rDNA at interstitial location of an acrocentric pair. Cichlasoma sanctifranciscense shares some symplesiomorphic traits described in Cichlidae (2n=48 and pericentromeric C-bands) while other chromosomal features diverge from the common trend reported in Cichlasomatini, such as multiple 18S rDNA sites combined with high FN values. Finally, the present results are useful to support taxonomic identification once species-specific markers have been provided in Cichlasoma sanctifranciscense. PMID:26753082

  2. Molecular systematics and taxonomic status of three latitudinally widespread nototheniid (Perciformes: Notothenioidei) fishes from the Southern Ocean.

    PubMed

    Miya, Tshoanelo; Gon, Ofer; Mwale, Monica; Poulin, Elie

    2016-01-01

    The taxonomic status of the three nototheniids, Lepidonotothen squamifrons, L. larseni and Gobionotothen marionensis from different localities in the Southern Ocean is re-evaluated at the DNA level. DNA sequence divergences and phylogenetic relationship were estimated using a combined mitochondrial (mtDNA, ND2 and COI) dataset and data for one nuclear gene (S7 intron 1). Phylogenies of both datasets had Lepidonotothen kempi nested within L. squamifrons lineage, with low sequence divergences (0% to 0.4%) between the two nominal species suggesting that they are populations of one species. Therefore, these results do not support the previous splitting of L. squamifrons into different species. Similarly, the L. larseni specimens also represented a single genetic unit (0.3% to 0.6%) with low geographic variation between Atlantic and Indian Ocean specimens, which does not support the splitting of this species into geographically restricted species. The mtDNA phylogeny clearly separated individuals of G. acuta from Kerguelen, Heard and MacDonald Islands from G. marionensis individuals into different clades, with sequence divergence of 2.9% between these clades supporting they are different species. PMID:27395508

  3. Comparative Mitogenomics of the Genus Odontobutis (Perciformes: Gobioidei: Odontobutidae) Revealed Conserved Gene Rearrangement and High Sequence Variations

    PubMed Central

    Ma, Zhihong; Yang, Xuefen; Bercsenyi, Miklos; Wu, Junjie; Yu, Yongyao; Wei, Kaijian; Fan, Qixue; Yang, Ruibin

    2015-01-01

    To understand the molecular evolution of mitochondrial genomes (mitogenomes) in the genus Odontobutis, the mitogenome of Odontobutis yaluensis was sequenced and compared with those of another four Odontobutis species. Our results displayed similar mitogenome features among species in genome organization, base composition, codon usage, and gene rearrangement. The identical gene rearrangement of trnS-trnL-trnH tRNA cluster observed in mitogenomes of these five closely related freshwater sleepers suggests that this unique gene order is conserved within Odontobutis. Additionally, the present gene order and the positions of associated intergenic spacers of these Odontobutis mitogenomes indicate that this unusual gene rearrangement results from tandem duplication and random loss of large-scale gene regions. Moreover, these mitogenomes exhibit a high level of sequence variation, mainly due to the differences of corresponding intergenic sequences in gene rearrangement regions and the heterogeneity of tandem repeats in the control regions. Phylogenetic analyses support Odontobutis species with shared gene rearrangement forming a monophyletic group, and the interspecific phylogenetic relationships are associated with structural differences among their mitogenomes. The present study contributes to understanding the evolutionary patterns of Odontobutidae species. PMID:26492246

  4. Ecology and management of the invasive lionfish Pterois volitans/miles complex (Perciformes: Scorpaenidae) in Southern Costa Rica.

    PubMed

    Sandel, Vera; Martínez-Fernández, Damián; Wangpraseurt, Daniel; Sierra, Luis

    2015-03-01

    Invasive species alter ecosystem integrity and functioning and are considered one of the major threats to biodiversity on a global scale. The indopacific lionfish (Plerois volitans [Linnaeus, 1758] / miles [Bennet, 1882] complex) is the first non-native marine fish that has established itself in the Western Atlantic. It was first reported in Florida in the 1980s and then spread across the entire Caribbean in subsequent years. In Costa Rica, lionfish were first sighted by the end of 2008 and are now present in all South Caribbean reefs. Lionfish are a major problem for local fisherman by displacing native fish species. The aim of this study was to determine population density, size and diet of lionfish populations at four study sites along the Southern Caribbean coast of Costa Rica. Two of the sites were located inside the National Park Cahuita where regular lionfish removal occurs, whereas the other two study sides do not experiment this kind of management. Total length and wet weight of >450 lionfish individuals were determined between March and June 2011. Three relative metrics of prey quantity (percent number, percent frequency, and percent weight) were compared from approximately 300 lionfish caught with the polespear in shallow waters (<7 m depth). Population density was assessed weekly through visual transect surveys. Our results showed that lionfish preyed mostly upon teleosts and crustaceans. Teleosts dominated lionfish diet in percent frequency (71%) and percent weight (85%), whereas crustaceans had the highest percent number (58%). The top five teleost families of dietary importance were Pomacentridae, Acanthuridae, Blennidae, Labridae and Serranidae. The average total length (+/- SD) of lionfish was 18.7 (+/- 5.7)cm and varied significantly between sites (p<0.001). Mean density of lionfish was 92fish/ha with no significant differences between sites. Smallest fish and lowest densities were found at the two sites inside the National Park Cahuita. Despite management efforts on a regional scale, nationwide efforts are ineffective and lionfish control activities are poorly implemented. We conclude that there is an urgent need to develop an improved institutional framework for local lionfish control that promotes effective coordination among the relevant stakeholders in order to deal with invasive lionfish in Costa Rica. PMID:26299126

  5. Diversity within the Redeye Bass, Micropterus coosae (Perciformes: Centrarchidae) species group, with descriptions of four new species.

    PubMed

    Baker, Winston H; Blanton, Rebecca E; Johnston, Carol E

    2013-01-01

    The Redeye Bass, Micropterus coosae, was described from the Mobile River basin, Chattahoochee, and Savannah rivers in Alabama and Georgia, USA, by Hubbs and Bailey (1940). At that time the authors recognized significant variation in the Black Warrior River population, and noted that with further study this form may be recognized as a separate taxon. An examination of variation in morphology and mitochondrial DNA supported this observation, and highlighted additional species-level variation, resulting in descriptions of a total of four new species: Micropterus cahabae, new sp., restricted to the Cahaba River system; Micropterus tallapoosae, new sp., restricted to the Tallapoosa River system; Micropterus warriorensis, new sp., from the Black Warrior River system; and Micropterus chattahoochae, new sp., from the Chattahoochee River system. Micropterus coosae is restricted to the Coosa River system. The new species differ from each other and from M. coosae by a combination of pigmentation and scale count characteristics, development of the tooth patch, and divergence within the ND2 gene. While two of these species are relatively common in upland streams within their ranges, M. warriorensis, M. cahabae and M. chattahoochae are uncommon and may warrant protection. PMID:26097954

  6. Studies on the alterations in haematological indices, micronuclei induction and pathological marker enzyme activities in Channa punctatus (spotted snakehead) perciformes, channidae exposed to thermal power plant effluent.

    PubMed

    Javed, Mehjbeen; Ahmad, Irshad; Ahmad, Ajaz; Usmani, Nazura; Ahmad, Masood

    2016-01-01

    The present study was conducted to assess the toxicity of thermal power plant effluent containing heavy metals (Fe > Cu > Zn > Mn > Ni > Co > Cr) on haematological indices, micronuclei, lobed nuclei and activity of pathological marker enzymes [alkaline phosphatase (ALP), aspartate transferase (AST), alanine transferase (ALT) and creatine kinase (CK)] in Channa punctatus. Total erythrocyte count (-54.52 %), hemoglobin (-36.98 %), packed cell volume (-36.25 %), mean corpuscular hemoglobin concentration (-1.41 %) and oxygen (O2) carrying capacity (-37.04 %) declined significantly over reference fish, however total leukocyte count (+25.43 %), mean corpuscular hemoglobin (+33.52 %) and mean corpuscular volume (+35.49 %) showed elevation. High frequency of micronuclei (1133.3 %) and lobed nuclei (150 %) were observed in exposed fish which may indicate mutagenesis. Activities of pathological marker enzymes ALP, AST, ALT and CK increased significantly in serum of exposed fish. The ratio of ALT: AST in exposed fish was beyond 1 which indicates manifestation of pathological processes. These biomarkers show that fish have macrocytic hypochromic anemia. Leukocytosis showed general defence response against heavy metal toxicity and marker enzymes showed tissue degeneration. In conclusion, thermal power plant effluent has strong potential to induce micronuclei, tissue pathology, making the fish anemic, weak, stressed and vulnerable to diseases. PMID:27386247

  7. Site fidelity, size, and morphology may differ by tidal position for an intertidal fish, Bathygobius cocosensis (Perciformes-Gobiidae), in Eastern Australia.

    PubMed

    Malard, Lucie A; McGuigan, Katrina; Riginos, Cynthia

    2016-01-01

    The intertidal zone is a transitional environment that undergoes daily environmental fluctuations as tides rise and fall. Relatively few fish species are adapted to endure the physiological pressures of this environment. This study focused on Bathygobius cocosensis (Gobiidae), a common intertidal fish in New South Wales, Australia. We investigated whether shore height impacted site fidelity, survival probability, fish size, and morphological traits with respect to tidal height. Mark-recapture methods were used over a five month period to determine if individuals in high shore pools had greater site fidelity; fish in high tide pools were more than twice as likely to be recaptured in their original pool than fish from low tide pools. High pool individuals were, on average, smaller with larger eyes and longer snouts relative to their size as compared to low pool individuals. We discuss several mechanisms that could cause the observed pattern in morphological variation. Ultimately, this study suggests that within species behaviour and morphology differ by tidal position for an intertidal fish. PMID:27547568

  8. Functional Categorization of Transcriptome in the Species Symphysodon aequifasciatus Pellegrin 1904 (Perciformes: Cichlidae) Exposed to Benzo[a]pyrene and Phenanthrene

    PubMed Central

    Lemgruber, Renato de Souza Pinto; Marshall, Nislanha Ana dos Anjos; Ghelfi, Andrea; Fagundes, Daniel Barros; Val, Adalberto Luis

    2013-01-01

    This study aims to evaluate the transcriptome alterations, through cDNA libraries, associated with the combined effects of two PAHs, benzo[a]pyrene (0.5 µg/L) and phenanthrene (50 µg/L), present in crude oil, on specimens of Symphysodon aequifasciatus (discus fish) after 48 h of exposure. The cDNA libraries were constructed according to the SOLiD™ SAGE™ protocol for sequencing in the SOLiD v.3 Plus sequencer. The results were analyzed by bioinformatics and differentially expressed genes were categorized using the gene ontology program. The functional categories (terms) found in the gene ontology and the gene network generated using STRING software were used to predict the adverse effects of benzo[a]pyrene and phenanthrene in the liver. In the present study, 27,127 genes (compared to Danio rerio database) were identified. Considering only those genes with a p-value less than or equal to 0.05 and greater than or equal to two-fold change in expression across libraries, we found 804 genes, 438 down-regulated (54%) and 366 up-regulated (46%), in the experimental group compared to the control. Out of this total, 327 genes were successfully categorized, 174 down-regulated and 153 up-regulated, using gene ontology. Using String, the gene network was composed by 199 nodes, 124 of them resulting in 274 interactions. The results showed that even an acute exposure of 48 h caused metabolic change in response to environmental contaminants, resulting in changes of cell integrity, in oxidation-reduction processes, in the immune response and disturbances of intracellular signaling of discus fish. Also the gene network has showed no central interplay cluster, exhibiting instead interconnected clusters interactions and connected sub-networks. These findings highlight that even an acute sublethal exposure of PAHs can cause metabolism changes that may affect survival of discus. Our findings using SOLiD coupled with SAGE-method resulted in a powerful and reliable means for gene expression analysis in discus, a non-model Amazonian fish. PMID:24312524

  9. Functional categorization of transcriptome in the species Symphysodon aequifasciatus Pellegrin 1904 (Perciformes: Cichlidae) exposed to benzo[a]pyrene and phenanthrene.

    PubMed

    Lemgruber, Renato de Souza Pinto; Marshall, Nislanha Ana dos Anjos; Ghelfi, Andrea; Fagundes, Daniel Barros; Val, Adalberto Luis

    2013-01-01

    This study aims to evaluate the transcriptome alterations, through cDNA libraries, associated with the combined effects of two PAHs, benzo[a]pyrene (0.5 µg/L) and phenanthrene (50 µg/L), present in crude oil, on specimens of Symphysodon aequifasciatus (discus fish) after 48 h of exposure. The cDNA libraries were constructed according to the SOLiD™ SAGE™ protocol for sequencing in the SOLiD v.3 Plus sequencer. The results were analyzed by bioinformatics and differentially expressed genes were categorized using the gene ontology program. The functional categories (terms) found in the gene ontology and the gene network generated using STRING software were used to predict the adverse effects of benzo[a]pyrene and phenanthrene in the liver. In the present study, 27,127 genes (compared to Danio rerio database) were identified. Considering only those genes with a p-value less than or equal to 0.05 and greater than or equal to two-fold change in expression across libraries, we found 804 genes, 438 down-regulated (54%) and 366 up-regulated (46%), in the experimental group compared to the control. Out of this total, 327 genes were successfully categorized, 174 down-regulated and 153 up-regulated, using gene ontology. Using String, the gene network was composed by 199 nodes, 124 of them resulting in 274 interactions. The results showed that even an acute exposure of 48 h caused metabolic change in response to environmental contaminants, resulting in changes of cell integrity, in oxidation-reduction processes, in the immune response and disturbances of intracellular signaling of discus fish. Also the gene network has showed no central interplay cluster, exhibiting instead interconnected clusters interactions and connected sub-networks. These findings highlight that even an acute sublethal exposure of PAHs can cause metabolism changes that may affect survival of discus. Our findings using SOLiD coupled with SAGE-method resulted in a powerful and reliable means for gene expression analysis in discus, a non-model Amazonian fish. PMID:24312524

  10. Mulloidichthys flavolineatus flavicaudus Fernandez-Silva & Randall (Perciformes, Mullidae), a new subspecies of goatfish from the Red Sea and Arabian Sea.

    PubMed

    Fernandez-Silva, Iria; Randall, John E; Golani, Daniel; Bogorodsky, Sergey V

    2016-01-01

    The number of goatfish species has increased recently, thanks in part to the application of molecular approaches to the taxonomy of a family with conservative morphology and widespread intraspecific color variation. A new subspecies Mulloidichthys flavolineatus flavicaudus Fernandez-Silva & Randall is described from the Red Sea and Arabian Sea, including Socotra and Gulf of Oman. It is characterized by a yellow caudal fin, 25-28 gill rakers, and 37-38 lateral-line scales and it is differentiated from nominal subspecies Mulloidichthys flavolineatus flavolineatus by 1.7% sequence divergence at the mitochondrial cytochrome b gene. The morphometric examination of specimens of Mulloidichthys flavolineatus flavolineatus revealed variation in head length, eye diameter, and barbel length, in western direction from the Hawaiian Islands, South Pacific, Micronesia, and the East Indies to the Indian Ocean. The population of Mulloidichthys flavolineatus flavicaudus subsp. n. in the Gulf of Aqaba differs from that of the remaining Red Sea by shorter barbels, smaller eyes, shorter head, and shorter pelvic fins. We present a list of 26 endemic fishes from the Gulf of Aqaba and discuss the probable basis for the endemism in the light of the geological history of this region. PMID:27551217