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Sample records for marina grishakova silvi

  1. A Model of Beaver Meadow Complex Evolution in the Silvies River Basin, Oregon.

    NASA Astrophysics Data System (ADS)

    Nash, C.; Grant, G.; Campbell, S. D.

    2014-12-01

    There is increasing evidence to suggest that the pervasive incision seen in the American West is due, in part, to the removal of beaver (Castor canadensis) in the first half of the 19th century. New restoration strategies for these systems focus on the reintroduction of beaver and construction of beaver dam analogs. Such dams locally raise streams beds and water tables, reconnect incised channels to their former floodplains, trap sediment, increase hydraulic diversity, and promote riparian vegetation. However, the geomorphic and hydrologic impacts of both the original beaver dams and their analogs are poorly understood. Observations in the Silvies River basin in Oregon, USA - an upland, semi-arid catchment with extremely high historic beaver populations and a presently recovering population, inform a conceptual model for valley floor evolution with beaver dams. The evolution of the beaver dam complex is characterized by eight stages of morphologic adjustment: water impoundment, sediment deposition, pond filling, multi-thread meadow creation, dam breaching, channel incision, channel widening, and floodplain development. Well-constructed beaver dams, given sufficient time and sediment flux, will evolve from a series of ponds to a multi-threaded channel flowing through a wet meadow complex. If a dam in the system fails, due to overtopping, undercutting, lack of maintenance, or abandonment, the upstream channel will concentrate into a single channel and incise, followed over time by widening once critical bank heights are exceeded. From stratigraphic, dendrochronologic, and geomorphic measurements, we are constraining average timescales associated with each stage's duration and transitional period. Measured sedimentation rates behind modern beaver dam analogs on five stream systems permit calculation of sediment flux over recent time periods, and aid in developing regional rates of sediment deposition over a range of drainage areas and gradients. Stratigraphic and

  2. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 18 Conservation of Power and Water Resources 2 2010-04-01 2010-04-01 false Commercial marina... ALTERATIONS Miscellaneous § 1304.404 Commercial marina harbor limits. The landward limits of commercial marina... of harbors at commercial marinas will be designated by TVA on the basis of the size and extent...

  3. 17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    17. MARINA WAY, HARBOUR WAY, AND MARITIME CHILD DEVELOPMENT CENTER (SEE ALSO HABS No. CA-2718), WITH RICHMOND SHIPYARD NO. 3. S. - Rosie the Riveter National Historical Park, 1401 Marina Way South, Richmond, Contra Costa County, CA

  4. ASSESSING ROOT DEMOGRAPHY AND CARBOHYDRATE DYNAMICS OF ZOSTERA MARINA

    EPA Science Inventory

    To help establish protective criteria for Zostera marina a more complete understanding of the factors affecting the status, condition, distribution and ecophysiology of Z. marina is needed. While Z. marina shoots are readily observed, assessing growth and carbon dynamics of roots...

  5. Saint Marina: the protectress of nephrology.

    PubMed

    Eftychiadis, A C; Marketos, S G

    1999-01-01

    Saint virgin and martyr Marina (Margarita) of Antioch in Pisidia (255-270) is recognized as the patron saint of kidney sufferers and the protectress of nephrology. Beginning in the 13th century she heals in particular patients suffering from nephropathies, pregnant women having a difficult childbirth, barren women and sickly children. She protects the patients from every side effect and complication. Saint Marina is represented in hagiography as a victor, defeating the dragon satan, holding a hammer or a cross and wearing a belt around her back in the area of kidneys. According to writers, artists and sculptors the belt is the perceivable means of Saint Marina for the miraculous recovery from and healing of kidney diseases. Therefore, kidney sufferers and pregnant women put belts upon her relics for blessing and then wore them. From the Middle Ages and Renaissance and up to the contemporary period Saint Marina (Margarita) was considered the patron saint of kidney sufferers. Justifiably she is recognized by the modern medical world as the protectress of nephrology. PMID:10213803

  6. TOTAL DISSOLVED AND BIOAVAILABLE METALS AT LAKE TEXOMA MARINAS

    EPA Science Inventory

    Dissolved metals in water and total metals in sediments have been measured at marina areas in Lake Texoma during June 1999 to October 2001, and October 2001, respectively. The metals most often found in the highest concentrations in marina water were Na and Ca, followed by Mg an...

  7. MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    MARINA & MAINE STREETS FACING NW. DARKER COLORED HOME ON SE CORNER. NYSTROM VILLAGE, LIKE ATCHISON VILLAGE (HAER CA-326-N), HOUSED WORKERS DURING WORLD WAR II - Rosie the Riveter National Historical Park, Nystrom Village, Marina & Maine Streets, Richmond, Contra Costa County, CA

  8. 33 CFR 80.1124 - Ventura Marina, CA.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Ventura Marina, CA. 80.1124 Section 80.1124 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1124 Ventura Marina, CA. A line drawn...

  9. 33 CFR 80.1118 - Marina Del Rey, CA.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Marina Del Rey, CA. 80.1118 Section 80.1118 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY INTERNATIONAL NAVIGATION RULES COLREGS DEMARCATION LINES Pacific Coast § 80.1118 Marina Del Rey, CA. (a) A line drawn...

  10. DIGITAL IMAGE ANALYSIS OF ZOSTERA MARINA LEAF INJURY

    EPA Science Inventory

    Current methods for assessing leaf injury in Zostera marina (eelgrass) utilize subjective indexes for desiccation injury and wasting disease. Because of the subjective nature of these measures, they are inherently imprecise making them difficult to use in quantifying complex leaf...

  11. 76 FR 37650 - Safety Zone; 4th of July Festival Berkeley Marina Fireworks Display Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; 4th of July Festival Berkeley Marina... Berkeley Pier, Berkeley, CA in support of the 4th of July Festival Berkeley Marina Fireworks Display... used in the fireworks display. Background and Purpose The City of Berkeley Marina will sponsor the...

  12. 75 FR 4783 - Federal Consistency Appeal by Villa Marina Yacht Harbour, Inc.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-29

    ..., 2009. See 74 FR 42,650. Under the CZMA, the Secretary must close the decision record in an appeal 160... National Oceanic and Atmospheric Administration Federal Consistency Appeal by Villa Marina Yacht Harbour... record in an administrative appeal filed by Villa Marina Yacht Harbour, Inc. (Villa Marina). DATES:...

  13. Cumulative Impact of Marinas on Estuarine Water Quality

    PubMed

    McAllister; Overton; Brill

    1996-05-01

    The purpose of this work is to present a modeling approach for assessing and managing the cumulative impact of marinas on estuarine systems. In doing so, both a water-quality model and a planning and management model are developed. The water-quality model predicts biochemical oxygen demand (BOD) and fecal coliform (FC) loadings from marina sources in a hypothetical North Carolina estuary. By running the water-quality model repeatedly with varied loading input, impact coefficients are determined. These impact coefficients are used in the planning and management model, the output of which gives the sizes and locations of marinas in the estuarine system such that dissolved oxygen (DO) and FC water-quality standards are maintained.Five different estuarine development scenarios are considered. Each scenario is evaluated with respect to both maximum and uniform land development constraints. In addition, two alternative fecal coliform standards are used with each of the development options. PMID:8661609

  14. Susceptibility of fish to Chattonella marina is determined by its tolerance to hypoxia.

    PubMed

    Shen, Min; Xu, Jingliang; Chan, Alice K Y; Au, Doris W T

    2011-01-01

    The harmful alga Chattonella marina has caused massive fish kills and economic losses worldwide. However, the fish kill mechanisms by C. marina have not been identified. The present study has confirmed that a significant elevation of blood osmolality is the universal response in moribund fish exposed to C. marina and the possible reasons leading to contradictory reports were identified. Both osmotic distress and respiratory impairment are important mechanisms leading to fish kill by C. marina. The susceptibility of marine fish to C. marina appears to be inversely related to their tolerance to hypoxia, with the hypoxia intolerant goldlined seabream being the most susceptible, and the hypoxia tolerant green grouper being the most tolerant to C. marina. Further studies in the marine medaka (Oryzias melastigma) showed that fish susceptibility to C. marina is directly related to susceptibility of the fish to hypoxia, but not related to its tolerance to hypersalinity stress. PMID:21704342

  15. Polynuclear aromatic hydrocarbons in oyster tissue around three coastal marinas

    SciTech Connect

    Marcus, J.M.; Stokes, T.P.

    1985-12-01

    Marinas present the potential for introduction of various pollutants into the surrounding waters such as coliform bacteria, primary pathogens, heavy metals, and petroleum hydrocarbons. Little data have been presented specifically addressing the effects of recreational marinas on petroleum hydrocarbon levels or, for that matter, other constituent levels in oysters near those marinas. In order to obtain such data, a comprehensive assessment of water and oyster quality around three coastal marinas was conducted by the South Carolina Department of Health and Environmental control (SCDHEC) during 1983. Polynuclear aromatic hydrocarbons (PAH) were selected as the petroleum hydrocarbon fraction of interest since they are mainly of pyrogenic origin; have been shown to be the most toxic/carcinogenic fraction of oil; have been shown to affect the respiration and heart rates of mussels; and have been shown to be linked to neoplasia in clams and proliferative disorders in mussels. C. virginica was chosen as the mollusc of interest because of its widespread distribution in the estuaries of South Carolina, its importance as an economic and recreational resource, and its suitability as a sentinel organism for monitoring coastal pollution.

  16. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 18 Conservation of Power and Water Resources 2 2011-04-01 2011-04-01 false Commercial marina harbor limits. 1304.404 Section 1304.404 Conservation of Power and Water Resources TENNESSEE VALLEY AUTHORITY APPROVAL OF CONSTRUCTION IN THE TENNESSEE RIVER SYSTEM AND REGULATION OF STRUCTURES AND...

  17. 18 CFR 1304.404 - Commercial marina harbor limits.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 18 Conservation of Power and Water Resources 2 2012-04-01 2012-04-01 false Commercial marina harbor limits. 1304.404 Section 1304.404 Conservation of Power and Water Resources TENNESSEE VALLEY AUTHORITY APPROVAL OF CONSTRUCTION IN THE TENNESSEE RIVER SYSTEM AND REGULATION OF STRUCTURES AND...

  18. Testing of Zostera marina for physical properties. [Eelgrass-Zostera marina

    SciTech Connect

    Rue, M.L.

    1984-03-23

    The innovative portion of this project is the use of a floating solar drier to process eelgrass (Zostera marina) for building insulation. The use of eelgrass as an insulating material is well documented up to about 50 years ago. At that time it was dried by spreading out on the ground along the shore. This is no longer possible because of the nearly full development of the shore area and the high cost of labor for such activity. It is proposed to build a floating unit that will collect the eelgrass detritus and immediately process the material by drying using solar heat. (An unusual advantage of using a floating drier is that it has the ability to track the sun during the day with a substantial increase in available solar energy). The drier will be constructed of perforated corrugated aluminum sheets with a black absorber coating. A continuous mesh belt will transport the eelgrass through the dryer to a bailer at the far end. The dried material will be transported to shore for packaging and distribution to building material suppliers.

  19. Rapid increase in copper concentrations in a new marina, San Diego Bay.

    PubMed

    Biggs, Trent W; D'Anna, Heather

    2012-03-01

    Concentrations of copper in water rose rapidly following the introduction of boats to a new marina in San Diego Bay. Two months after the marina reached half its capacity, a majority of water samples exceeded chronic and acute criteria for dissolved copper, and copper concentrations in several samples exceeded the highest concentrations observed in another marina that has been listed as an impaired water body. A box model suggested that a small fraction of the leached copper was sequestered in sediment. Copper concentrations in water entering the marina from the bay was more than half the chronic concentration limit, so only 50% of marina boat capacity could be accommodated without exceeding the chronic criterion more than 50% of the time. Copper concentrations in water may increase rapidly following boat introduction in small marinas, but could return to pre-introduction levels by controlling boat numbers or reducing use of copper-based paints. PMID:22245437

  20. Draft genome sequence of Shimia marina CECT 7688(T).

    PubMed

    Rodrigo-Torres, Lidia; Pujalte, María J; Arahal, David R

    2016-08-01

    Shimia marina is a member of the family Rhodobacteraceae described in 2006. Strain CL-TA03(T) (=CECT 7688(T)) was isolated from a biofilm formed on an acrylic slide submerged in surface water in a coastal fish farm in Tongyeong, Korea. Here we report the draft genome sequence and annotation of S. marina CECT 7688(T) which is composed by 4,001,860bp arranged in 45 scaffolds with a G+C content of 57.4%, 3878 protein coding genes, 40 tRNA genes, 4 rRNA genes and 1 repeat region. An overview of annotated genes revealed diverse genes encoding for exopolysaccharide and capsular biosynthesis enzymes, secondary metabolite biosynthesis enzymes, multiple antibiotic and metal resistance and the ability for degrading aromatic compounds. PMID:26852259

  1. VIEW OF TOWN CENTER, MARINA VIEW TOWERS SOUTH BUILDING (ORIGINALLY ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    VIEW OF TOWN CENTER, MARINA VIEW TOWERS SOUTH BUILDING (ORIGINALLY TOWN CENTER PLAZA WEST) AT 1000-1100 SIXTH STREET; TOWN CENTER PLAZA WEST WAS DESIGNED BY I.M. PEI & PARTNERS AND BUILT IN 1962 BY WEBB & KNAPP - Southwest Washington, Urban Renewal Area, Bounded by Independence Avenue, Washington Avenue, South Capitol Street, Canal Street, P Street, Maine Avenue & Washington Channel, Fourteenth Street, D Street, & Twelfth Street, Washington, District of Columbia, DC

  2. Fragility of Floating Docks for Small Craft Marinas

    NASA Astrophysics Data System (ADS)

    Keen, A.; Eskijian, M.; Lynett, P. J.; Ayca, A.

    2015-12-01

    Because of the damage resulting from the 2010 Chile and 2011 Japanese tele-tsunamis, damage to the small craft marinas in California has become an important concern. This paper will explain the methodology and results used to simulate the demand and also the structural capacity of the floating dock system, composed of floating docks, fingers and moored vessels during tsunami events. The intent is to develop a predictive tool to understand the vulnerability of California's small craft harbors to tsunami events. To validate the methodology, the probabilistic model will be applied to Santa Cruz Harbor. Maps of maximum velocity and mean current direction from the 2011 Japan tsunami have been developed using a numerical model. Cleat and pile guide locations will be recorded and georeferenced from aerial images before the event. The fragility curves for each dock/finger system will be compared with damage reports and aerial images from just after the tsunami event. A discussion of how the fragility curves compare with the damage reports will be included. It is anticipated that these curves will be useful to marina operators to use as a tool to determine where rehabilitation might be necessary to mitigate some of the damage from the next event. Conclusions will focus on how results can be used by marina operators to reduce harbor vulnerability to tsunamis.

  3. Phylogenetic position of Multicilia marina and the evolution of Amoebozoa.

    PubMed

    Nikolaev, Sergey I; Berney, Cédric; Petrov, Nikolai B; Mylnikov, Alexandre P; Fahrni, José F; Pawlowski, Jan

    2006-06-01

    Recent molecular phylogenetic studies have led to the erection of the phylum Amoebozoa, uniting naked and testate lobose amoebae, the mycetozoan slime moulds and amitochondriate amoeboid protists (Archamoebae). Molecular data together with ultrastructural evidence have suggested a close relationship between Mycetozoa and Archamoebae, classified together in the Conosea, which was named after the cone of microtubules that, when present, is characteristic of their kinetids. However, the relationships of conoseans to other amoebozoans remain unclear. Here, we obtained the complete small-subunit (SSU) rRNA gene sequence (2746 bp) of the enigmatic, multiflagellated protist Multicilia marina, which has formerly been classified either in a distinct phylum, Multiflagellata, or among lobose amoebae. Our study clearly shows that Multicilia marina belongs to the Amoebozoa. Phylogenetic analyses including 60 amoebozoan SSU rRNA gene sequences revealed that Multicilia marina branches at the base of the Conosea, together with another flagellated amoebozoan, Phalansterium solitarium, as well as with Gephyramoeba sp., Filamoeba nolandi and two unidentified amoebae. This is the first report showing strong support for a clade containing all flagellated amoebozoans and we discuss the position of the root of the phylum Amoebozoa in the light of this result. PMID:16738126

  4. Heavy metals in oyster tissue around three coastal marinas

    SciTech Connect

    Marcus, J.M.; Thompson, A.M.

    1986-04-01

    The past decade has presented an unprecedented period of growth and development along the coastline of South Carolina. The majority of this development has been to serve the recreation and tourism industry and, as such, has included the construction of numerous recreational marinas in the coastal waters of the State. Various plans have been presented for the siting of marinas in pristine estuarine waters. This has raised much concern due to the possible impacts of such development on the plentiful oyster resource found in those waters. Marinas present the potential for the introduction of pollutants such as heavy metals into the surrounding waters. This investigation was conducted by the South Carolina Department of Health and Environmental Control (SCDHEC) during 1983, and yielded a multifaceted data base composed of physiocochemical and bacteriological analyses from water, chemical analyses from sediment and chemical/bacteriological physiological analyses from the American oyster, Crassostrea virginica (Gmelin). C. virginica was chosen as the organism of interest due to its wide distribution in the estuaries of South Carolina, its importance as an economic and recreational resource and its suitability as a sentinel organism for monitoring coastal pollution.

  5. Development of approaches to predict the distribution of Zostera marina and Z. japonica in Pacific Northwest estuaries

    EPA Science Inventory

    The dominant species of submerged aquatic vegetation (SAV) in Pacific Northwest (PNW) estuaries is the intertidal and shallow subtidal seagrass, Zostera marina. Beds of Z. marina constitute a critical habitat, including providing habitat for juvenile salmon. Additionally, the n...

  6. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 18 Conservation of Power and Water Resources 2 2013-04-01 2012-04-01 true Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... purposes of inspection; (i) Spill-proof features adequate for transfer of sewage from all movable...

  7. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 18 Conservation of Power and Water Resources 2 2010-04-01 2010-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... purposes of inspection; (i) Spill-proof features adequate for transfer of sewage from all movable...

  8. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 18 Conservation of Power and Water Resources 2 2014-04-01 2014-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... purposes of inspection; (i) Spill-proof features adequate for transfer of sewage from all movable...

  9. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 18 Conservation of Power and Water Resources 2 2011-04-01 2011-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... purposes of inspection; (i) Spill-proof features adequate for transfer of sewage from all movable...

  10. 18 CFR 1304.403 - Marina sewage pump-out stations and holding tanks.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 18 Conservation of Power and Water Resources 2 2012-04-01 2012-04-01 false Marina sewage pump-out... OTHER ALTERATIONS Miscellaneous § 1304.403 Marina sewage pump-out stations and holding tanks. All pump... purposes of inspection; (i) Spill-proof features adequate for transfer of sewage from all movable...

  11. 77 FR 37604 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-22

    ... SECURITY Coast Guard 33 CFR Part 165 Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA... enforce the safety zone for the Berkeley Marina Fourth of July Fireworks display in the Captain of the... necessary to protect life and property of the maritime public from the hazards associated with the...

  12. 78 FR 29022 - Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-17

    ... SECURITY Coast Guard 33 CFR Part 165 Safety Zone; Fourth of July Fireworks, Berkeley Marina, Berkeley, CA... enforce the safety zone for the Berkeley Marina Fourth of July Fireworks display in the Captain of the... necessary to protect life and property of the maritime public from the hazards associated with the...

  13. 33 CFR 162.200 - Marina del Rey, Calif.; restricted area.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 2 2011-07-01 2011-07-01 false Marina del Rey, Calif.; restricted area. 162.200 Section 162.200 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.200 Marina del Rey, Calif.; restricted area. (a)...

  14. 33 CFR 162.200 - Marina del Rey, Calif.; restricted area.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 2 2012-07-01 2012-07-01 false Marina del Rey, Calif.; restricted area. 162.200 Section 162.200 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.200 Marina del Rey, Calif.; restricted area. (a)...

  15. 33 CFR 162.200 - Marina del Rey, Calif.; restricted area.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 2 2013-07-01 2013-07-01 false Marina del Rey, Calif.; restricted area. 162.200 Section 162.200 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) PORTS AND WATERWAYS SAFETY INLAND WATERWAYS NAVIGATION REGULATIONS § 162.200 Marina del Rey, Calif.; restricted area. (a)...

  16. The protozoa dinoflagellate Oxyrrhis marina contains selenoproteins and the relevant translation apparatus.

    PubMed

    Osaka, Takashi; Beika, Asa; Hattori, Asuka; Kohno, Yoshinori; Kato, Koichi H; Mizutani, Takaharu

    2003-01-01

    In the phylogenetic tree, selenoproteins and the corresponding translation machinery are found in Archaea, Eubacteria, and animals, but not in fungi and higher plants. As very little is known about Protozoa, we searched for the presence of selenoproteins in the primitive dinoflagellate Oxyrrhis marina, belonging to the Protoctista kingdom. Four selenoproteins could be obtained from O. marina cells cultured in the presence of 75Se. Using O. marina or bovine liver cytosolic extracts, we could serylate and selenylate in vitro total O. marina tRNAs. Moreover, the existence of a tRNA(Sec) could be deduced from in vivo experiments. Lastly, an anti-serum against the specialized mammalian translation elongation factor mSelB reacted with a protein of 48-kDa molecular mass. Altogether, our data showed that O. marina contains selenoproteins and suggests that the corresponding translation machinery is related to that found in animals. PMID:12480549

  17. Reconstructing Contaminant Deposition in a San Francisco Bay Marina, California

    PubMed Central

    Love, Adam H.; Esser, Bradley K.; Hunt, James R.

    2010-01-01

    Two sediment cores were collected from a marina in the San Francisco Bay to characterize historical sediment contamination resulting from the direct discharge of industrial wastewater from Naval Air Station Alameda. Depth profiles of trace metals, petroleum hydrocarbons, and radionuclides were determined with a 12-cm spacing down to a depth of 120 cm. The chronology of sediment accumulation is established by depth profiles of sedimentary time markers in conjunction with information on site history. The traditional approach of determining sediment accumulation rates by measuring atmospheric 210Pb deposition was obscured by a larger source of 210Pb in the sediments from the decay of anthropogenic 226Ra, likely from luminescent paints used at this facility and released to the marina. The sedimentation rates inferred from the data indicate that the greatest amount of contamination by trace metals and petroleum hydrocarbons took place between 1940 and 1960. In addition, anthropogenic 226Ra activities are positively correlated with some of the contaminants in the sediments, allowing the wastewater discharged from the facility to be distinguished from baywide contamination. In locations such as this, where there is a complex history of contaminant deposition, a source-specific tracer may be the only feasible method of attributing historical contamination to a point source. PMID:20333267

  18. Sulfide Intrusion and Detoxification in the Seagrass Zostera marina.

    PubMed

    Hasler-Sheetal, Harald; Holmer, Marianne

    2015-01-01

    Gaseous sulfide intrusion into seagrasses growing in sulfidic sediments causes little or no harm to the plant, indicating the presence of an unknown sulfide tolerance or detoxification mechanism. We assessed such mechanism in the seagrass Zostera marina in the laboratory and in the field with scanning electron microscopy coupled to energy dispersive X-ray spectroscopy, chromatographic and spectrophotometric methods, and stable isotope tracing coupled with a mass balance of sulfur compounds. We found that Z. marina detoxified gaseous sediment-derived sulfide through incorporation and that most of the detoxification occurred in underground tissues, where sulfide intrusion was greatest. Elemental sulfur was a major detoxification compound, precipitating on the inner wall of the aerenchyma of underground tissues. Sulfide was metabolized into thiols and entered the plant sulfur metabolism as well as being stored as sulfate throughout the plant. We conclude that avoidance of sulfide exposure by reoxidation of sulfide in the rhizosphere or aerenchyma and tolerance of sulfide intrusion by incorporation of sulfur in the plant are likely major survival strategies of seagrasses in sulfidic sediments. PMID:26030258

  19. Antifouling biocides in water and sediments from California marinas.

    PubMed

    Sapozhnikova, Yelena; Wirth, Edward; Schiff, Kenneth; Fulton, Michael

    2013-04-15

    Irgarol 1051 is a common antifouling biocide and is highly toxic to non-target plant species at low ng/L concentrations. We measured up to 254 ng/L Irgarol in water and up to 9 ng/g dry weight Irgarol in sediments from Southern California recreational marinas. Irgarol's metabolite, M1, concentrations were up to 62 ng/L in water and 5 ng/g dry weight in sediments. Another antifouling biocide, diuron, reached up to 68 ng/L in water and 4 ng/g dry weight in sediments. The maximum Irgarol concentrations in water were greater than the Irgarol concentration recommended as the plant toxicity benchmark (136 ng/L), suggesting that Irgarol concentrations may be high enough to cause changes in phytoplankton communities in the sampled marinas. Irgarol concentrations measured in sediments were greater than calculated Environmental Risk Limits (ERLs) for Irgarol in sediments (1.4 ng/g). Antifouling pesticide accumulation in sediments may present a potential undetermined risk for benthic organisms. PMID:23453818

  20. Sulfide Intrusion and Detoxification in the Seagrass Zostera marina

    PubMed Central

    Hasler-Sheetal, Harald; Holmer, Marianne

    2015-01-01

    Gaseous sulfide intrusion into seagrasses growing in sulfidic sediments causes little or no harm to the plant, indicating the presence of an unknown sulfide tolerance or detoxification mechanism. We assessed such mechanism in the seagrass Zostera marina in the laboratory and in the field with scanning electron microscopy coupled to energy dispersive X-ray spectroscopy, chromatographic and spectrophotometric methods, and stable isotope tracing coupled with a mass balance of sulfur compounds. We found that Z. marina detoxified gaseous sediment-derived sulfide through incorporation and that most of the detoxification occurred in underground tissues, where sulfide intrusion was greatest. Elemental sulfur was a major detoxification compound, precipitating on the inner wall of the aerenchyma of underground tissues. Sulfide was metabolized into thiols and entered the plant sulfur metabolism as well as being stored as sulfate throughout the plant. We conclude that avoidance of sulfide exposure by reoxidation of sulfide in the rhizosphere or aerenchyma and tolerance of sulfide intrusion by incorporation of sulfur in the plant are likely major survival strategies of seagrasses in sulfidic sediments. PMID:26030258

  1. Influence of neighboring plants on shading stress resistance and recovery of eelgrass, Zostera marina L.

    PubMed

    Gustafsson, Camilla; Boström, Christoffer

    2013-01-01

    Stressful environments may enhance the occurrence of facilitative interspecific interactions between plants. In several regions, Zostera marina occurs in mixed assemblages. However, the potential effects of plant diversity on stress responses and stability properties of Z. marina are poorly understood. We investigated the resistance and recovery of Z. marina subjected to shading (1 mo) in a field experiment lasting 2.5 mo. We shaded Z. marina planted in mono- and polycultures (Potamogeton perfoliatus, P. pectinatus, P. filiformis) in a factorial design (Shading×Richness) at 2 m depth. We estimated the resistance and recovery of Z. marina by measuring four response variables. Polyculture Z. marina lost proportionally less biomass than monocultures, thus having a greater resistance to shading. In contrast, after a 1 mo recovery period, monocultures exhibited higher biomass gain, and a faster recovery than polycultures. Our results suggest that plant species richness enhances the resistance of Z. marina through facilitative mechanisms, while the faster recovery in monocultures is possibly due to interspecific competition. Our results highlight the need of a much better understanding of the effects of interspecific interactions on ecosystem processes in mixed seagrass meadows, and the preservation of diverse plant assemblages to maintain ecosystem functioning. PMID:23717532

  2. Simultaneous measurements of H+ and O2 fluxes in Zostera marina and its physiological implications.

    PubMed

    Lin, A-Peng; Wang, Guang-Ce; Zhou, Wen-Qin

    2013-08-01

    Zostera marina (eelgrass) is an important ecological component of many shallow, temperate lagoons. Evidence suggests that Z. marina has a high bicarbonate utilization capability, which could be promoted by possible proton extrusion and the consequent formation of an 'acid zone' in the apoplastic space (unstirred layer) of its leaves. It has been found that 50 mM of the buffer Tris significantly inhibited the photosynthetic O(2) evolution of Z. marina and it was proposed that this was because of Tris's ability to bond with protons outside the cell wall. To investigate if H(+) played an important role in the photosynthetic carbon utilization of Z. marina, it is very important to simultaneously monitor the photosynthesis status and possible H(+) fluxes. However, probably because of the lack of suitable techniques, this has never been attempted. In this study, experiments were undertaken on Z. marina by monitoring H(+) and O(2) fluxes and the relative electron transport rates during light-dark transition. During stable photosynthesis, in addition to an obvious O(2) outflow, there was a significant net H(+) influx connected to Z. marina photosynthesis. The inhibitory effects of both Tris and respiration inhibitors on apparent O(2) evolution of Z. marina were confirmed. However, evidence did not support the proposed Tris inhibition mechanism. PMID:23163246

  3. Influence of Neighboring Plants on Shading Stress Resistance and Recovery of Eelgrass, Zostera marina L

    PubMed Central

    Gustafsson, Camilla; Boström, Christoffer

    2013-01-01

    Stressful environments may enhance the occurrence of facilitative interspecific interactions between plants. In several regions, Zostera marina occurs in mixed assemblages. However, the potential effects of plant diversity on stress responses and stability properties of Z. marina are poorly understood. We investigated the resistance and recovery of Z. marina subjected to shading (1 mo) in a field experiment lasting 2.5 mo. We shaded Z. marina planted in mono- and polycultures (Potamogeton perfoliatus, P. pectinatus, P. filiformis) in a factorial design (Shading×Richness) at 2 m depth. We estimated the resistance and recovery of Z. marina by measuring four response variables. Polyculture Z. marina lost proportionally less biomass than monocultures, thus having a greater resistance to shading. In contrast, after a 1 mo recovery period, monocultures exhibited higher biomass gain, and a faster recovery than polycultures. Our results suggest that plant species richness enhances the resistance of Z. marina through facilitative mechanisms, while the faster recovery in monocultures is possibly due to interspecific competition. Our results highlight the need of a much better understanding of the effects of interspecific interactions on ecosystem processes in mixed seagrass meadows, and the preservation of diverse plant assemblages to maintain ecosystem functioning. PMID:23717532

  4. Seagrasses are negatively affected by organic matter loading and Arenicola marina activity in a laboratory experiment.

    PubMed

    Govers, Laura L; Pieck, Timon; Bouma, Tjeerd J; Suykerbuyk, Wouter; Smolders, Alfons J P; van Katwijk, Marieke M

    2014-06-01

    When two ecosystem engineers share the same natural environment, the outcome of their interaction will be unclear if they have contrasting habitat-modifying effects (e.g., sediment stabilization vs. sediment destabilization). The outcome of the interaction may depend on local environmental conditions such as season or sediment type, which may affect the extent and type of habitat modification by the ecosystem engineers involved. We mechanistically studied the interaction between the sediment-stabilizing seagrass Zostera noltii and the bioturbating and sediment-destabilizing lugworm Arenicola marina, which sometimes co-occur for prolonged periods. We investigated (1) if the negative sediment destabilization effect of A. marina on Z. noltii might be counteracted by positive biogeochemical effects of bioirrigation (burrow flushing) by A. marina in sulfide-rich sediments, and (2) if previously observed nutrient release by A. marina bioirrigation could affect seagrasses. We tested the individual and combined effects of A. marina presence and high porewater sulfide concentrations (induced by organic matter addition) on seagrass biomass in a full factorial lab experiment. Contrary to our expectations, we did not find an effect of A. marina on porewater sulfide concentrations. A. marina activities affected the seagrass physically as well as by pumping nutrients, mainly ammonium and phosphate, from the porewater to the surface water, which promoted epiphyte growth on seagrass leaves in our experimental set-up. We conclude that A. marina bioirrigation did not alleviate sulfide stress to seagrasses. Instead, we found synergistic negative effects of the presence of A. marina and high sediment sulfide levels on seagrass biomass. PMID:24633960

  5. Unravelling the pathway of respiratory toxicity in goldlined seabream (Rhabdosargus sarba) induced by the harmful alga Chattonella marina.

    PubMed

    Shen, Min; Xu, Jingliang; Chiang, Michael W L; Au, Doris W T

    2011-08-01

    The harmful alga Chattonella marina has caused massive fish kills and economic losses worldwide. Suffocation is generally believed to be the major cause of fish death by C. marina. However, the specific mechanisms leading to respiratory disorder in fish and subsequent fish kills by C. marina remain unknown. The goldlined seabream, highly susceptible to C. marina, was employed to investigate temporal changes of physiological, histopathological and biochemical parameters related to respiratory function at different stages of exposure to C. marina. Hemoglobin oxidation and blood lyses were not found in goldlined seabream exposed to C. marina, which could not be the key reasons accounting for pO(2) drop in the stressed fish. Gill histopathology such as irregular organization of lamellae, mucous with algal cells trapped in interfilamental spaces, were typical in C. marina exposed fish. A surge of plasma lactate occurred in goldlined seabream shortly after exposure to C. marina (0.5h) and sustained throughout the exposure period, indicating rapid onset of and persistent anaerobic respiration in C. marina exposed fish. Depletion of plasma glucose was clearly evident in goldlined seabream showing stress symptoms and near death. Yet, fish alive in the C. marina bloom did not exhibit plasma glucose depletion. The results suggest that availability of fermentable fuel as indicated by glucose level is critical to determine fish survival in C. marina exposure. Overall, our findings have rebuked the involvement of hemolysins and/or nitric oxide as the culprits for C. marina toxicity to fish. This study is the first to demonstrate the pathway of respiratory toxicity induced by the harmful alga C. marina in fish. PMID:21632022

  6. Hydroacoustic basis for detection and characterization of eelgrass (Zostera marina)

    SciTech Connect

    Sabol, B.; McCarthy, E.; Rocha, K.

    1997-06-01

    Understanding the distribution and density of seagrasses is important for a variety of environmental applications. Physical techniques for detection and characterization are labor and cost intensive and provide little insight into spatial distribution. optical-based techniques are limited by water clarity - frequently resulting in systematic underestimation of the extent of seagrasses. Active hydroacoustic techniques have shown the ability to detect seagrasses but the phenomenology behind detection is poorly understood. Laboratory and in-situ hydroacoustic measurements are presented for eelgrass (Zostera marina), a common seagrass in the United States. Based on these data, hydroacoustic approaches for wide area detection and mapping are discussed and several are demonstrated within areas of established eelgrass beds in Narragansett Bay, Rhode Island.

  7. Genetic relatedness influences plant biomass accumulation in eelgrass (Zostera marina).

    PubMed

    Stachowicz, John J; Kamel, Stephanie J; Hughes, A Randall; Grosberg, Richard K

    2013-05-01

    In multispecies assemblages, phylogenetic relatedness often predicts total community biomass. In assemblages dominated by a single species, increasing the number of genotypes increases total production, but the role of genetic relatedness is unknown. We used data from three published experiments and a field survey of eelgrass (Zostera marina), a habitat-forming marine angiosperm, to examine the strength and direction of the relationship between genetic relatedness and plant biomass. The genetic relatedness of an assemblage strongly predicted its biomass, more so than the number of genotypes. However, contrary to the pattern observed in multispecies assemblages, maximum biomass occurred in assemblages of more closely related individuals. The mechanisms underlying this pattern remain unclear; however, our data support a role for both trait differentiation and cooperation among kin. Many habitat-forming species interact intensely with conspecifics of varying relatedness; thus, genetic relatedness could influence the functioning of ecosystems dominated by such species. PMID:23594554

  8. Recolonization of intertidal Zostera marina L. (eelgrass) following experimental shoot removal

    EPA Science Inventory

    The recovery of eelgrass (Zostera marina) from physical disturbances is understudied and no attention has been given to the likely differences in damage recovery rates between the continuous lower intertidal perennial meadows and higher intertidal eelgrass patches. In the present...

  9. DIGESTIVE BIOAVAILABILITY TO A DEPOSIT FEDDER (ARENICOLA MARINA) OF POLYCYCLIC AROMATIC HYDROCARBONS ASSOCIATED WITH ANTHRPOGENIC PARTICLES

    EPA Science Inventory

    Marine sediments around urban areas serve as catch basins for anthropogenic particles containing polycyclic aromatic hydrocarbons (PAHs). Using incubations with gut fluids extracted from a deposit-feeding polychaete (Arenicola marina), we determined the digestive bioavailability ...

  10. Distribution of intertidal eelgrass (Zostera marina L.) with bathymetry in three Pacific Northwest estuaries

    EPA Science Inventory

    Distributions of native intertidal eelgrass (Zostera marina L.) and non-vegetated substrates in three coastal estuaries of the Pacific Northwest (PNW) were determined using color infrared (CIR) aerial orthophotography during daylight low tides. Comparison of the digital classif...

  11. The bathymetric distribution of intertidal eelgrass Zostera marina L. in three coastal estuaries of Oregon

    EPA Science Inventory

    Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon coastal estuaries (Tillamook, Yaquina, and Alsea) were determined by digital classification of aerial color infrared (CIR) orthophotographs. Stratified random surv...

  12. Estuarine intertidal sediment temperature variability in Zoster marina and Z. japonica habitats in Yaquina Bay, Oregon

    EPA Science Inventory

    Physical characterization of intertidal estuarine plant habitats over time may reveal distribution-limiting thresholds. Temperature data from loggers embedded in sediment in transects crossing Zostera marina and Z. japonica habitats in lower Yaquina Bay, Oregon display signific...

  13. JMarinas: a simple tool for the environmentally sound management of small marinas.

    PubMed

    Mensa, J A; Vassallo, P; Fabiano, M

    2011-01-01

    A novel index for the preliminary evaluation of the distribution of pollutants in the harbor environment (Small Marinas Pollution Risk) is proposed. An associated Environmental Decision Support System (JMarinas) has been developed which implements the Multiple Attribute Decision Making theory (MADM) and uses the harbor's map as geographical support for computations. The MADM matrix is built considering various attributes of the marina and is calculated using both qualitative and quantitative data. Jmarinas has been applied to two small marinas along the Ligurian coast (Marina degli Aregai and Portosole) during the winter and summer seasons. Results show good spatial and temporal resolution and are in agreement with observations. For further quantitative assessment of performance, we refer to Irene et al. (2010). PMID:20833466

  14. EFFECTS OF PLANFORM GEOMETRY ON TIDAL FLUSHING AND MIXING IN MARINAS

    EPA Science Inventory

    Physical hydraulic models of marinas possessing rectangular planforms were tested to determine effects of various geometrical parameters on tidal flushing and internal circulation in small harbors. Parameters investigated were: (1) Planform geometry aspect ratio; (2) ratio of ent...

  15. 5. NORTHEAST SIDEELEVATION. Puente de la Marina, San LorenzoFlorida ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. NORTHEAST SIDE-ELEVATION. - Puente de la Marina, San Lorenzo-Florida & Cerro Gordo Neighborhoods, spanning Rio Grande de Loiza River at Narciso Varona-Suarez Street, San Lorenzo, San Lorenzo Municipio, PR

  16. 4. NORTHWEST APPROACHELEVATION. Puente de la Marina, San LorenzoFlorida ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    4. NORTHWEST APPROACH-ELEVATION. - Puente de la Marina, San Lorenzo-Florida & Cerro Gordo Neighborhoods, spanning Rio Grande de Loiza River at Narciso Varona-Suarez Street, San Lorenzo, San Lorenzo Municipio, PR

  17. 3. SOUTHEAST APPROACHELEVATION. Puente de la Marina, San LorenzoFlorida ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    3. SOUTHEAST APPROACH-ELEVATION. - Puente de la Marina, San Lorenzo-Florida & Cerro Gordo Neighborhoods, spanning Rio Grande de Loiza River at Narciso Varona-Suarez Street, San Lorenzo, San Lorenzo Municipio, PR

  18. ZOSTERA MARINA IN A PACIFIC NORTHWEST ESTUARY: WHAT FACTORS CONTROL INTERTIDAL DISTRIBUTION?

    EPA Science Inventory

    The impact of four factors (desiccation, macroalgae, erosion, light) on the distribution of Zostera marina was examined across tidal and bathymetric slope gradients. Data detailing seagrass characteristics, including 1 production, macroalgae biomass and sediment characteristics ...

  19. Effect of Temperature and Nutrient Manipulations on eelgrass Zostera marina L. from the Pacific Northwest, USA

    EPA Science Inventory

    Global climate change will have a large impact on the three predominate drivers of estuarine seagrass productivity, temperature, light and nutrients. I experimentally evaluate the response of Pacific Northwest Z. marina to interactive effects of temperature and nutrient conditio...

  20. Toad Intoxication in the Dog by Rhinella marina : The Clinical Syndrome and Current Treatment Recommendations.

    PubMed

    Johnnides, Stephanie; Green, Tiffany; Eubig, Paul

    2016-01-01

    Oral exposure to the secretions of Rhinella marina (formerly Bufo marinus ) can carry a high fatality rate without early and appropriate treatment. In dogs, the clinical syndrome, which is evident almost immediately, manifests in profuse ptyalism along with gastrointestinal, respiratory, and neurologic signs. Severe cardiac arrhythmias develop less frequently. This review will cover the history, toxicology, and clinical syndrome of Rhinella marina intoxication, and will discuss the recommended therapies for stabilization. PMID:27259028

  1. Growth and alkaline phosphatase activity of Chattonella marina and Heterosigma akashiwo in response to phosphorus limitation.

    PubMed

    Wang, Zhao-Hui; Liang, Yu

    2015-02-01

    The growth and alkaline phosphatase activity (APA) of two raphidophyceae species Chattonella marina and Heterosigma akashiwo were investigated in response to P-limitation and subsequent addition of dissolved inorganic phosphorus (DIP, NaH2PO4) and two dissolved organic phosphorus (DOP) compounds: guanosine 5-monophosphate (GMP) and triethyl phosphate (TEP). APA levels increased greatly after P-starvation as the decrease of the cellular phosphorus quotes (Qp). C. marina responded to P-limitation quickly and strongly, with 10-fold increase in APA within 24 hr after P-starvation. The larger difference between maximal and minimal QP values in C. marina indicated its high capacity in P storage. APA of H. akashiwo was maximally enlarged about 2.5 times at 48 hr of P-starvation. After the addition of nutrients, cell numbers of C. marina increased in all treatments including the P-free culture, demonstrating the higher endurance of C. marina to P-limitation. However, those of H. akashiwo increased only in DIP and GMP cultures. APA increased only after the addition of the monophosphate ester GMP. The results suggest that quick responses of C. marina to P-limitation, high capacity in P storage as well as endurance for P-depletion provide this species an ecological advantage in phytoplankton community competition under DIP-limited conditions. PMID:25662231

  2. Habitat suitability of the Wadden Sea for restoration of Zostera marina beds

    NASA Astrophysics Data System (ADS)

    van Katwijk, M. M.; Hermus, D. C. R.; de Jong, D. J.; Asmus, R. M.; de Jonge, V. N.

    2000-07-01

    A conceptual model is proposed, describing potential Zostera marina habitats in the Wadden Sea, based on reported data from laboratory, mesocosm and field studies. Controlling factors in the model are dynamics, degree of desiccation, turbidity, nutrients and salinity. A distinction has been made between a higher and a lower zone of potential habitats, each suitable for different morphotypes of Z. marina. The model relates the decline of Z. marina in the Wadden Sea to increased sediment and water dynamics, turbidity, drainage of sediments (resulting in increased degree of desiccation) and total nutrient loads during the twentieth century. The upper and lower delineation of both the higher and the lower zone of potential Z. marina habitats appear to be determined by one or a combination of several of these factors. Environmental changes in one of these factors will therefore influence the borderlines of the zones. The lower zone of Z. marina will be mainly affected by increased turbidity, sediment dynamics, degree of desiccation during low tide and nutrient load. The higher zone will be affected by increases in water and sediment dynamics, desiccation rates and nutrient loads. Potential Z. marina habitats are located above approx. -0.80 m mean sea level (when turbidity remains at the same level as in the early 1990s) in sheltered, undisturbed locations, and preferably where some freshwater influence is present. At locations with a high, near-marine, salinity, the nutrient load has to be low to allow the growth of Z. marina. The sediment should retain enough water during low tide to keep the plants moist. Our results suggest that the return of Z. marina beds within a reasonable time-scale will require not only suitable habitat conditions, but also revegetation measures, as the changes in the environment resulting from the disappearance of Z. marina may impede its recovery, and the natural import of propagules will be unlikely. Furthermore, the lower zone of Z. marina

  3. Current European Labyrinthula zosterae are not virulent and modulate seagrass (Zostera marina) defense gene expression.

    PubMed

    Brakel, Janina; Werner, Franziska Julie; Tams, Verena; Reusch, Thorsten B H; Bockelmann, Anna-Christina

    2014-01-01

    Pro- and eukaryotic microbes associated with multi-cellular organisms are receiving increasing attention as a driving factor in ecosystems. Endophytes in plants can change host performance by altering nutrient uptake, secondary metabolite production or defense mechanisms. Recent studies detected widespread prevalence of Labyrinthula zosterae in European Zostera marina meadows, a protist that allegedly caused a massive amphi-Atlantic seagrass die-off event in the 1930's, while showing only limited virulence today. As a limiting factor for pathogenicity, we investigated genotype × genotype interactions of host and pathogen from different regions (10-100 km-scale) through reciprocal infection. Although the endophyte rapidly infected Z. marina, we found little evidence that Z. marina was negatively impacted by L. zosterae. Instead Z. marina showed enhanced leaf growth and kept endophyte abundance low. Moreover, we found almost no interaction of protist × eelgrass-origin on different parameters of L. zosterae virulence/Z. marina performance, and also no increase in mortality after experimental infection. In a target gene approach, we identified a significant down-regulation in the expression of 6/11 genes from the defense cascade of Z. marina after real-time quantitative PCR, revealing strong immune modulation of the host's defense by a potential parasite for the first time in a marine plant. Nevertheless, one gene involved in phenol synthesis was strongly up-regulated, indicating that Z. marina plants were probably able to control the level of infection. There was no change in expression in a general stress indicator gene (HSP70). Mean L. zosterae abundances decreased below 10% after 16 days of experimental runtime. We conclude that under non-stress conditions L. zosterae infection in the study region is not associated with substantial virulence. PMID:24691450

  4. Shift in fish assemblage structure due to loss of seagrass Zostera marina habitats in Sweden

    NASA Astrophysics Data System (ADS)

    Pihl, Leif; Baden, Susanne; Kautsky, Nils; Rönnbäck, Patrik; Söderqvist, Tore; Troell, Max; Wennhage, Håkan

    2006-03-01

    The areal extent of Zostera marina in the archipelago of the Swedish Skagerrak has decreased by 60% over two decades. To investigate the effects of Z. marina loss on the local fish assemblages, the fish fauna was compared between existing seagrass beds and sites where seagrass had vanished. A field study was carried out at four shallow locations in the outer archipelago of the coast in June 2004. Within each location two sites were sampled, one with an existing Z. marina bed and another where Z. marina had disappeared. Fish were sampled semi-quantitatively with a beach seine. Samples were taken during both day and night and captured fish were examined to species, enumerated and measured in the field, and released thereafter. The number of fish species was found to be significantly higher in Z. marina habitats compared to areas where seagrass was missing, and density and biomass of fish were generally lower in areas dominated by bare sediment compared to those in the seagrass habitats. Several species and groups of fishes (i.e., gadoids, labrids, syngnathids) were absent or occurred in low densities at sites where Z. marina was missing. For example, juvenile 0-group cod density was reduced by 96% at sites where Z. marina had disappeared. Such a reduction in recruitment of cod is in the same order of magnitude as the combined effect of seal predation and mortality due to by-catches in the eel fyke-net fishery estimated for the archipelago of the Swedish Skagerrak. Hence, the results clearly indicate a shift in the fish assemblage, including a loss of taxa at the family level as a result of degradation in habitat-forming vegetation.

  5. Sodium Transport and Compartmentation in Spergularia marina1

    PubMed Central

    Lazof, Dennis; Cheeseman, John M.

    1986-01-01

    In this paper, a combination of tracer uptake, efflux, and pulse-chase techniques is applied to the problem of compartmentation of Na+ (24Na+) in the roots of intact, midvegetative Spergularia marina (L.) Griseb. plants. An approach is presented for conducting useful compartmental analysis when it is known that the assumptions required for straightforward interpretations of influx and efflux studies are invalid. Linear rates of 24Na+ accumulation in both roots and shoots were attained within at most a few minutes following the start of labeling. Shoot 24Na+ contents equaled root contents within about 20 minutes. Analysis of root accumulation rates, and compartmental and pulse-chase efflux studies indicated that the unidirectional flux rates involved were at least an order of magnitude greater than linear rates of root and shoot accumulation. These rapid fluxes involved only a small portion of the total root Na+ (about 1%). The results suggest the existence of a small symplastic compartment, distinct from the `bulk cytoplasm,' rapidly exchanging with the medium, and responsible for delivery of Na+ to the xylem. The physical identity of this compartment and its physiological significance are discussed with respect to precedents in the literature. PMID:16664895

  6. Mobile epifauna on Zostera marina, and infauna of its inflorescences

    NASA Astrophysics Data System (ADS)

    Hellwig-Armonies, Monika

    1988-06-01

    The faunal colonization of the leaves and inflorescences of intertidal Zostera marina L. and of the ambient water has been studied at the Island of Sylt (North Sea). The abundance of the snail Littorina littorea L. and the isopod Jaera albifrons Leach correlates significantly with leaf surface area. This is not the case with the abundance of meiofaunal Plathelminthes, Nematoda, Copepoda, and Polychaeta. However, they increase significantly with the numbers of generative shoots in the sampled seagrass bunches. Members of these taxa inhabit the Zostera inflorescences, and average abundance increases with the degree of decay of inflorescences. This temporary microhabitat presumably offers food and shelter. Copepods and ostracods dominate in the ambient water. Planktonic calanoid copepods correlate with the amount of sampled seawater, while Ostracoda correlate with the amount of resuspended detritus suggesting that they were resuspended themselves. The study shows that some meiofaunal taxa can rapidly exploit a short-lived habitat such as the Zostera inflorescences. Juvenile polychaetes use inflorescences as a nursery.

  7. Eelgrass (Zostera marina) Food Web Structure in Different Environmental Settings

    PubMed Central

    Thormar, Jonas; Hasler-Sheetal, Harald; Baden, Susanne; Boström, Christoffer; Clausen, Kevin Kuhlmann; Krause-Jensen, Dorte; Olesen, Birgit; Rasmussen, Jonas Ribergaard; Svensson, Carl Johan; Holmer, Marianne

    2016-01-01

    This study compares the structure of eelgrass (Zostera marina L.) meadows and associated food webs in two eelgrass habitats in Denmark, differing in exposure, connection to the open sea, nutrient enrichment and water transparency. Meadow structure strongly reflected the environmental conditions in each habitat. The eutrophicated, protected site had higher biomass of filamentous algae, lower eelgrass biomass and shoot density, longer and narrower leaves, and higher above to below ground biomass ratio compared to the less nutrient-enriched and more exposed site. The faunal community composition and food web structure also differed markedly between sites with the eutrophicated, enclosed site having higher biomass of consumers and less complex food web. These relationships resulted in a column shaped biomass distribution of the consumers at the eutrophicated site whereas the less nutrient-rich site showed a pyramidal biomass distribution of consumers coupled with a more diverse consumer community. The differences in meadow and food web structure of the two seagrass habitats, suggest how physical setting may shape ecosystem response and resilience to anthropogenic pressure. We encourage larger, replicated studies to further disentangle the effects of different environmental variables on seagrass food web structure. PMID:26752412

  8. Eelgrass (Zostera marina) Food Web Structure in Different Environmental Settings.

    PubMed

    Thormar, Jonas; Hasler-Sheetal, Harald; Baden, Susanne; Boström, Christoffer; Clausen, Kevin Kuhlmann; Krause-Jensen, Dorte; Olesen, Birgit; Rasmussen, Jonas Ribergaard; Svensson, Carl Johan; Holmer, Marianne

    2016-01-01

    This study compares the structure of eelgrass (Zostera marina L.) meadows and associated food webs in two eelgrass habitats in Denmark, differing in exposure, connection to the open sea, nutrient enrichment and water transparency. Meadow structure strongly reflected the environmental conditions in each habitat. The eutrophicated, protected site had higher biomass of filamentous algae, lower eelgrass biomass and shoot density, longer and narrower leaves, and higher above to below ground biomass ratio compared to the less nutrient-enriched and more exposed site. The faunal community composition and food web structure also differed markedly between sites with the eutrophicated, enclosed site having higher biomass of consumers and less complex food web. These relationships resulted in a column shaped biomass distribution of the consumers at the eutrophicated site whereas the less nutrient-rich site showed a pyramidal biomass distribution of consumers coupled with a more diverse consumer community. The differences in meadow and food web structure of the two seagrass habitats, suggest how physical setting may shape ecosystem response and resilience to anthropogenic pressure. We encourage larger, replicated studies to further disentangle the effects of different environmental variables on seagrass food web structure. PMID:26752412

  9. Antifouling paint booster biocides (Irgarol 1051 and diuron) in marinas and ports of Bushehr, Persian Gulf.

    PubMed

    Saleh, Abolfazl; Molaei, Saeideh; Sheijooni Fumani, Neda; Abedi, Ehsan

    2016-04-15

    In the present study, antifouling paint booster biocides, Irgarol 1051 and diuron were measured in ports and marinas of Bushehr, Iran. Results showed that in seawater samples taken from ports and marinas, Irgarol was found at the range of less than LOD to 63.4ngL(-1) and diuron was found to be at the range of less than LOD to 29.1ngL(-1) (in Jalali marina). 3,4-dichloroaniline (3,4-DCA), as a degradation product of diuron, was also analyzed and its maximum concentration was 390ngL(-1). Results for analysis of Irgarol 1051 in sediments showed a maximum concentration of 35.4ngg(-1) dry weight in Bandargah marina. A comparison between the results of this study and those of other published works showed that Irgarol and diuron pollutions in ports and marinas of Bushehr located in the Persian Gulf were less than the average of reports from other parts of the world. PMID:26917092

  10. INTERTIDAL SEDIMENT TEMPERATURE VARIANCE AS A POSSIBLE LIMITING FACTOR FOR EELGRASSES ZOSTERA MARINA AND ZOSTERA JAPONICA IN YAQUINA BAY, OR

    EPA Science Inventory

    The eelgrass species Zostera marina and Z. japonica co-occur in most Pacific Northwest estuaries; Z. marina is regarded as a native species, Z. japonica as non-indigenous, introduced in Yaquina Bay in approximately 1975. The mean tidal range is ~2 m, extreme ~3m. The vertical d...

  11. FACTORS CONTROLLING ZOSTERA MARINA L. GROWTH IN THE EASTERN AND WESTERN PACIFIC OCEAN: COMPARISONS BETWEEN SOUTH KOREA AND OREGON, USA

    EPA Science Inventory

    Zostera marina distribution is circum-global and tolerates a wide range of environmental conditions. Consequently, it is likely that populations have adapted to local environmental conditions of light, temperature and nutrient supply. We compared Z. marina growth dynamics over a ...

  12. Late Miocene diversification and phylogenetic relationships of the huge toads in the Rhinella marina (Linnaeus, 1758) species group (Anura: Bufonidae).

    PubMed

    Maciel, Natan Medeiros; Collevatti, Rosane Garcia; Colli, Guarino Rinaldi; Schwartz, Elisabeth Ferroni

    2010-11-01

    We investigated the phylogeny and biogeography of the Rhinella marina group, using molecular, morphological, and skin-secretion data, contributing to an understanding of Neotropical faunal diversification. The maximum-parsimony and Bayesian analyzes of the combined data recovered a monophyletic R. marina group. Molecular dating based on Bayesian inferences and fossil calibration placed the earliest phylogenetic split within the R. marina group at ∼ 10.47 MYA, in the late Miocene. Two rapid major diversifications occurred from Central Brazil, first northward (∼ 8.08 MYA) in late Miocene and later southward (∼ 5.17 MYA) in early Pliocene. These results suggest that barriers and dispersal routes created by the uplift of Brazilian Central Shield and climatic changes explain the diversification and current species distributions of the R. marina group. Dispersal-vicariance analyzes (DIVA) indicated that the two major diversifications of the R. marina group were due to vicariance, although eleven dispersals subsequently occurred. PMID:20813190

  13. Do small marinas drive habitat specific impacts? A case study from Mediterranean Sea.

    PubMed

    Di Franco, Antonio; Graziano, Mariagrazia; Franzitta, Giulio; Felline, Serena; Chemello, Renato; Milazzo, Marco

    2011-05-01

    Many human activities add new structures to the marine landscape. Despite the fact that human structures cause some inevitable impacts, surprisingly little information exists on the effects of marina on natural marine assemblages. The aim of this paper is to assess habitat-specific response of benthic sessile organisms of rocky shores in relation to the presence of a small marina. Sampling was carried out at three coastal habitats (midshore, lowshore and subtidal) by means of visual censuses adopting an after-control-impact (ACI) experimental design. It appears that the marina affects the structure and composition of benthic communities of both the midshore and the lowshore. Little effect was evident on shallow subtidal assemblage structure. The results of the present study clearly show habitat-specific responses of coastal benthic assemblages to the presence of infrastructure. PMID:21421247

  14. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model

    PubMed Central

    2015-01-01

    Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

  15. Bioelectrical activity in the heart of the lugworm Arenicola marina.

    PubMed

    Abramochkin, Denis V; Tennova, Natalia V; Hirazova, Elizaveta E; Pizgareva, Anna V; Kuzmin, Vladislav S; Sukhova, Galina S

    2010-06-01

    Standard microelectrode technique was used to study electrical activity of the isolated heart of the polychaete annelid, Arenicola marina. Typical pacemaker activity with slow diastolic depolarization was observed in all recordings. The average maximum diastolic potential (-58.4 +/- 3.2 mV), the average amplitude of the action potential (28.7 +/- 4.7 mV) and the average total duration of the action potential (2,434 +/- 430 ms) were determined. There has been no gradient of automaticity observed in our studies, which suggests that all regions of the Arenicola heart could possess pacemaker functions. Acetylcholine (ACh) produced a concentration dependent (5 x 10(-8)-5 x 10(-5) M) increase of the beating rate via increase in the rate of the diastolic depolarization. ACh (5 x 10(-5) M) increased beating rate by 2.5-fold compared to the control rate. A stronger action of ACh resulted in depolarization, block of action potential generation and contracture of the heart. The non-hydrolysable ACh analog carbacholine (10(-8)-10(-6) M) produced similar effects. All effects of ACh and carbacholine were abolished by 5 x 10(-6) M atropine. D-Tubocurarine (5 x 10(-5) M) did not significantly alter effects of ACh or carbacholine. Epinephrine (10(-8)-10(-6) M) caused the slowing of pacemaker activity and marked decrease of action potential duration. 10(-6) M epinephrine produced complete cardiac arrest. The effects of epinephrine were not significantly altered by the beta-blocker propranolol (5 x 10(-6) M). The beta-agonist isoproterenol (10(-7)-10(-5) M) and the alpha-agonist xylometazoline (10(-6)-10(-5) M) did not produce significant effects. Thus, cholinergic effects in the Arenicola heart are likely to be mediated via muscarinic receptors, while the nature of adrenergic effects needs further investigation. PMID:20198374

  16. Sexual Recruitment in Zostera marina: Progress toward a Predictive Model.

    PubMed

    Furman, Bradley T; Peterson, Bradley J

    2015-01-01

    Ecophysiological stress and physical disturbance are capable of structuring meadows through a combination of direct biomass removal and recruitment limitation; however, predicting these effects at landscape scales has rarely been successful. To model environmental influence on sexual recruitment in perennial Zostera marina, we selected a sub-tidal, light-replete study site with seasonal extremes in temperature and wave energy. During an 8-year observation period, areal coverage increased from 4.8 to 42.7%. Gains were stepwise in pattern, attributable to annual recruitment of patches followed by centrifugal growth and coalescence. Recruitment varied from 13 to 4,894 patches per year. Using a multiple linear regression approach, we examined the association between patch appearance and relative wave energy, atmospheric condition and water temperature. Two models were developed, one appropriate for the dispersal of naked seeds, and another for rafted flowers. Results indicated that both modes of sexual recruitment varied as functions of wind, temperature, rainfall and wave energy, with a regime shift in wind-wave energy corresponding to periods of rapid colonization within our site. Temporal correlations between sexual recruitment and time-lagged climatic summaries highlighted floral induction, seed bank and small patch development as periods of vulnerability. Given global losses in seagrass coverage, regions of recovery and re-colonization will become increasingly important. Lacking landscape-scale process models for seagrass recruitment, temporally explicit statistical approaches presented here could be used to forecast colonization trajectories and to provide managers with real-time estimates of future meadow performance; i.e., when to expect a good year in terms of seagrass expansion. To facilitate use as forecasting tools, we did not use statistical composites or normalized variables as our predictors. This study, therefore, represents a first step toward linking

  17. New species of Parapharyngodon (Nematoda: Pharyngodonidae) in Rhinella marina (Anura: Bufonidae) from Grenada, West Indies

    USGS Publications Warehouse

    Bursey, Charles; Drake, Michael; Cole, Rebecca; Sterner, Mauritz, III; Pinckney, Rhonda; Zieger, Ulrike

    2013-01-01

    Parapharyngodon grenadaensis n. sp. (Nematoda: Pharyngodonidae) from the large intestine of the cane toad, Rhinella marina, is described and illustrated. Parapharyngodon grenadaensis n. sp. is the 48th species assigned to the genus and the 16th species from the Neotropical region. It differs from other species in the genus by possessing 4 pairs of caudal papillae, an echinate anterior cloacal lip, and a blunt spicule of 67–104 μm. This is only the second report of R. marina harboring a species of Parapharyngodon.

  18. Analysis of transcriptional regulation and tissue-specific expression of Avicennia marina Plasma Membrane Protein 3 suggests it contributes to Na(+) transport and homoeostasis in A. marina.

    PubMed

    Chidambaram, Rajalakshmi; Venkataraman, Gayatri; Parida, Ajay

    2015-07-01

    Plasma membrane proteins (PMP3) play a role in cation homoeostasis. The 5' flanking sequence of stress inducible, Avicennia marina PMP3 (AmPMP3prom) was transcriptionally fused to (a) GUS or (b) GFP-AmPMP3 and analyzed in transgenic tobacco. Tissue-histochemical GUS and GFP:AmPMP3 localization are co-incident under basal and stress conditions. AmPMP3prom directed GUS activity is highest in roots. Basal transcription is conferred by a 388bp segment upstream of the translation start site. A 463bp distal enhancer in the AmPMP3prom confers enhanced expression under salinity in all tissues and also responds to increases in salinity. The effect of a central, stem-specific negative regulatory region is suppressed by the distal enhancer. The A. marina rhizosphere encounters dynamic changes in salinity at the inter-tidal interface. The complex, tissue-specific transcriptional responsiveness of AmPMP3 to salinity appears to have evolved in response to these changes. Under salinity, guard cell and phloem-specific expression of GFP:AmPMP3 is highly enhanced. Mesophyll, trichomes, bundle sheath, parenchymatous cortex and xylem parenchyma also show GFP:AmPMP3 expression. Cis-elements conferring stress, root and vascular-specific expression are enriched in the AmPMP3 promoter. Pronounced vascular-specific AmPMP3 expression suggests a role in salinity induced Na(+) transport, storage, and secretion in A. marina. PMID:26025523

  19. Negative effects of blue mussel ( Mytilus edulis) presence in eelgrass ( Zostera marina) beds in Flensborg fjord, Denmark

    NASA Astrophysics Data System (ADS)

    Vinther, Hanne Fogh; Laursen, Jens Sund; Holmer, Marianne

    2008-03-01

    The effect of blue mussel ( Mytilus edulis) presence in eelgrass ( Zostera marina) beds was studied from June 2004 to July 2005 in Flensborg fjord, Denmark. The field experiments were conducted at two stations, one with only Z. marina (Eelgrass station) present and one where M. edulis were present in the Z. marina beds (Mixed station). Zostera marina parameters were measured (growth of leaves, shoot density, leaf length, and nutrient content) in combination with epiphyte cover and sediment parameters (sulphate reduction rates, sediment nutrient fluxes, organic content, C, N and P content) to examine possible positive and negative effects of the mussels on eelgrass performance. The fluxes of ammonium from the sediments were stimulated at all sampling dates at the Mixed station, and possibly stimulated epiphyte growth at this station. Further 15N signals in epiphytes from the Mixed station suggested that excretion products from the mussels were important nitrogen sources at this station. Sulphate reduction rates were enhanced at the Mixed station and also sediment sulphide concentrations increased under mussel influence, which may have resulted in sulphide toxicity and decreased growth of Z. marina at this station. The study indicates that for Z. marina beds in Flensborg Fjord the effects of M. edulis in seagrass beds are primarily negative, and raises the question whether this leads to negative effects on the stability and expansion of Z. marina beds.

  20. EFFECTS OF EROSION AND MACROALGAE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN A NORTHEASTERN PACIFIC ESTUARY (USA)

    EPA Science Inventory

    Eelgrass (Zostera marina) in open-coast northeastern Pacific estuaries is primarily intertidal, yet little research has been done on the natural factors controlling its upper intertidal growth limits. This two-year study in the Yaquina Estuary (Newport, Oregon, USA) evaluated the...

  1. Biochemical characterization of the eelgrass Zostera marina at its southern distribution limit in the North Pacific

    USGS Publications Warehouse

    Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

    2004-01-01

    The eelgrass Zostera marina L. is distributed along the Baja California Peninsula (Mexico) where it is exposed to a wide range of irradiances and temperatures that could promote changes in its biochemical composition. Consequently, the objective of this study was to characterize the variations in the levels of chlorophyll, carbohydrates, proteins, fiber, ash and calories in the shoots of Z. marina from the north (San Quintin) and south (Ojo de Liebre and San Ignacio lagoons) of the peninsula. Temperature in the southern lagoons was 5-6??C higher than in the northern lagoon; likewise, in situ irradiance was two-fold greater in the south than in the north. As a result of the lower irradiance levels, the concentration of chlorophyll in the shoots of Z. marina was twice as high (1.7 mg gWW-1) in the northern lagoon than in the southern ones (0.8 mg gWW-1). Similar to chlorophyll levels, the concentration of soluble carbohydrates in the shoots was greater in the northern lagoon than in the southern ones, suggesting that the high levels of chlorophyll are enough to compensate for the low irradiance levels and to maintain a positive carbon balance at San Quintin. On the other hand, the levels of proteins in the shoots from the north of the peninsula were slightly lower than those from the southern populations. In general, these results suggest that the different environmental conditions to which Z. marina is exposed along the peninsula impact its biochemical composition.

  2. Passive and active defense in toads: the parotoid macroglands in Rhinella marina and Rhaebo guttatus.

    PubMed

    Mailho-Fontana, Pedro L; Antoniazzi, Marta M; Toledo, Luís F; Verdade, Vanessa K; Sciani, Juliana M; Barbaro, Katia C; Pimenta, Daniel C; Rodrigues, Miguel T; Jared, Carlos

    2014-02-01

    Amphibians have many skin poison glands used in passive defense, in which the aggressor causes its own poisoning when biting prey. In some amphibians the skin glands accumulate in certain regions forming macroglands, such as the parotoids of toads. We have discovered that the toad Rhaebo guttatus is able to squirt jets of poison towards the aggressor, contradicting the typical amphibian defense. We studied the R. guttatus chemical defense, comparing it with Rhinella marina, a sympatric species showing typical toad passive defense. We found that only in R. guttatus the parotoid is adhered to the scapula and do not have a calcified dermal layer. In addition, in this species, the plugs obstructing the glandular ducts are more fragile when compared to R. marina. As a consequence, the manual pressure necessary to extract the poison from the parotoid is twice as high in R. marina when compared to that used in R. guttatus. Compared to R. marina, the poison of R. guttatus is less lethal, induces edema and provokes nociception four times more intense. We concluded that the ability of R. guttatus to voluntary squirt poison is directly related to its stereotyped defensive behavior, together with the peculiar morphological characteristics of its parotoids. Since R. guttatus poison is practically not lethal, it is possibly directed to predators' learning, causing disturbing effects such as pain and edema. The unique mechanism of defense of R. guttatus may mistakenly justify the popular myth that toads, in general, squirt poison into people's eyes. PMID:24130001

  3. 76 FR 38020 - Safety Zone; Bay Point Fireworks, Bay Point Marina; Marblehead, OH

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-29

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Bay Point Fireworks, Bay Point Marina.... This Zone is intended to restrict vessels from portions of Lake Erie for the Bay Point Fireworks. This... fireworks displays. DATES: This regulation is effective from 10 p.m. on July 2, 2011 through 10:20 p.m....

  4. Physiological responses of Zostera marina and Cymodocea nodosa to light-limitation stress.

    PubMed

    Silva, João; Barrote, Isabel; Costa, Monya M; Albano, Sílvia; Santos, Rui

    2013-01-01

    The effects of light-limitation stress were investigated in natural stands of the seagrasses Zostera marina and Cymodocea nodosa in Ria Formosa coastal lagoon, southern Portugal. Three levels of light attenuation were imposed for 3 weeks in two adjacent meadows (2-3 m depth), each dominated by one species. The response of photosynthesis to light was determined with oxygen electrodes. Chlorophylls and carotenoids were determined by high-pressure liquid chromatography (HPLC). Soluble protein, carbohydrates, malondialdehyde and phenol contents were also analysed. Both species showed evident signs of photoacclimation. Their maximum photosynthetic rates were significantly reduced with shading. Ratios between specific light harvesting carotenoids and the epoxidation state of xanthophyll cycle carotenoids revealed significantly higher light harvesting efficiency of C. nodosa, a competitive advantage in a low light environment. The contents of both soluble sugars and starch were considerably lower in Z. marina plants, particularly in the rhizomes, decreasing even further with shading. The different carbohydrate energy storage strategies found between the two species clearly favour C. nodosa's resilience to light deprivation, a condition enhanced by its intrinsic arrangement of the pigment pool. On the other hand, Z. marina revealed a lower tolerance to light reduction, mostly due to a less plastic arrangement of the pigment pool and lower carbohydrate storage. Our findings indicate that Z. marina is close to a light-mediated ecophysiological threshold in Ria Formosa. PMID:24312260

  5. Population structure and genetic diversity among eelgrass (Zostera marina) beds and depths in San Francisco Bay.

    PubMed

    Ort, Brian S; Cohen, C Sarah; Boyer, Katharyn E; Wyllie-Echeverria, Sandy

    2012-07-01

    The seagrass Zostera marina is widely distributed in coastal regions throughout much of the northern hemisphere, forms the foundation of an important ecological habitat, and is suffering population declines. Studies in the Atlantic and Pacific oceans indicate that the degree of population genetic differentiation is location dependent. San Francisco Bay, California, USA, is a high-current, high-wind environment where rafting of seed-bearing shoots has the potential to enhance genetic connectivity among Z. marina populations. We tested Z. marina from six locations, including one annual population, within the bay to assess population differentiation and to compare levels of within-population genetic diversity. Using 7 microsatellite loci, we found significant differentiation among all populations. The annual population had significantly higher clonal diversity than the others but showed no detectible differences in heterozygosity or allelic richness. There appears to be sufficient input of genetic variation through sexual reproduction or immigration into the perennial populations to prevent significant declines in the number and frequency of alleles. In additional depth comparisons, we found differentiation among deep and shallow portions in 1 of 3 beds evaluated. Genetic drift, sweepstakes recruitment, dispersal limitation, and possibly natural selection may have combined to produce genetic differentiation over a spatial scale of 3-30 km in Z. marina. This implies that the scale of genetic differentiation may be smaller than expected for seagrasses in other locations too. We suggest that populations in close proximity may not be interchangeable for use as restoration material. PMID:22577191

  6. ESCHERICHIA COLI AND TOTAL COLIFORMS IN WATER AND SEDIMENTS AT LAKE MARINAS

    EPA Science Inventory

    Escherichia coli, a fecal coliform, and total coliforms were monitored between September 1999 to October 2001 in five marinas on Lake Texoma, located on the Oklahoma and Texas border. General trend was that densities of E. coli were lower in the summer season due to the lower ...

  7. Two Cases of Peritonitis Caused by Kocuria marina in Patients Undergoing Continuous Ambulatory Peritoneal Dialysis▿

    PubMed Central

    Lee, Ja Young; Kim, Si Hyun; Jeong, Haeng Soon; Oh, Seung Hwan; Kim, Hye Ran; Kim, Yeong Hoon; Lee, Jeong Nyeo; Kook, Joong-Ki; Kho, Weon-Gyu; Bae, Il Kwon; Shin, Jeong Hwan

    2009-01-01

    Kocuria spp. are members of the Micrococcaceae family that are frequently found in the environment and on human skin. Few human infections have been reported. We describe what appear to be the first two cases of Kocuria marina peritonitis in patients undergoing continuous ambulatory peritoneal dialysis. PMID:19692561

  8. The cane or marine toad, Rhinella marina (Anura, Bufonidae): two genetically and morphologically distinct species.

    PubMed

    Acevedo, Aldemar A; Lampo, Margarita; Cipriani, Roberto

    2016-01-01

    Rhinella marina is a Neotropical toad that has been introduced widely worldwide. Its toxic effects to frog-eating predators threaten the native and domestic fauna of some regions where it has been introduced. Despite previous studies suggesting two genetically distinct cryptic species within R. marina, one east and one west of the Andes, its taxonomic status remained unresolved due to the absence of morphological complementary evidence. For the first time, data from two mitochondrial genes (ND3 and CR) and 23 morphometric landmarks are combined to evaluate the taxonomic status of this species. Our results support the hypothesis of two separate evolutionary lineages within R. marina and demonstrate that these lineages have significantly diverged in skull shape. We identified two distinct morphotypes, one eastern and one Andean western, with no overlapping morphospaces. The geographic pattern of genetic variation was consistent with a stable structured population with no evidence of recent demographic or geographic expansions. The concordance between the observed geographic patterns in morphometric and genic traits calls for the recognition of two species under R. marina name. PMID:27394759

  9. OCCURRENCE OF METYL TERT-BUTYL ETHER (MTBE) AT FIVE MARINAS IN LAKE TEXOMA

    EPA Science Inventory



    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at loc...

  10. MONITORING CHLOROPHYLL-A AS A MEASURE OF ALGAE IN LAKE TEXOMA MARINAS

    EPA Science Inventory

    Lake water quality in five marinas on Lake Texoma was determined over a two year period. Quality parameters were methyl tert-butyl ether, nitrate, some metals, fecal coliform and algae. Common blue-green algae can produce a toxin harmful to other aquatic organisms and humans. ...

  11. Long-term Changes of a Brackish-water Eelgrass ( Zostera marina L.) Community Indicate Effects of Coastal Eutrophication

    NASA Astrophysics Data System (ADS)

    Boström, C.; Bonsdorff, E.; Kangas, P.; Norkko, A.

    2002-11-01

    The distribution and importance of eelgrass (Zostera marina L.) meadows for associated faunal communities in the coastal waters of the Baltic Sea are still poorly known. In these low-saline (5-7), shallow coastal areasZ. marina grows at its limit of distribution, forming mostly patchy meadows. In June 1993, a seagrass locality (Tvärminne, SW Finland) thoroughly studied in 1968-71 was revisited in order to detect possible long-term changes in both vegetation structure (distribution, density, biomass) and benthic fauna (species composition, abundance, biomass, distribution and diversity patterns). The same sampling design as in the 1970s was used in both sparse (<20 shoots m-2) and dense (>150 shoots m-2) Z. marina. In addition, the feeding-efficiency of adult flounder (Platichtys flesus L.) on infauna was measured by counting feeding pits in vegetated and bare sand. The analysis shows that the shoot density had increased in sparse Z. marina, while dense Z. marina patches showed similar biomass values (20 g AFDW m-2) as in the 1970s. In contrast to the vegetation, where little apparent change could be recorded, the total abundance and biomass of zoobenthos has increased significantly between 1968-71 and 1993 in the dense Z. marina patches. These changes are mainly attributed to significant increases of the bivalve Macoma balthica L., mudsnails Hydrobia spp. and oligochaetes. In sparseZ. marina diversity in terms of number of taxa exhibited minor changes over time, whereas in dense Z. marina patches the mean number of taxa has increased from 16 to 20. The vegetation cover was sufficient to reduce significantly the predation effects of flounder on seagrass infauna. This study represents a rare example of long-term persistence of seagrass communities in an area where the negative effects of nutrient enrichment are evident. The faunal changes in the Z. marina community indicate increased food availability, which is associated with positive effects of coastal

  12. Influence of model selection on the predicted distribution of the seagrass Zostera marina

    NASA Astrophysics Data System (ADS)

    Downie, Anna-Leena; von Numers, Mikael; Boström, Christoffer

    2013-04-01

    There is an increasing need to model the distribution of species and habitats for effective conservation planning, but there is a paucity of models for the marine environment. We used presence (131) and absence (219) records of the marine angiosperm Zostera marina L. from the archipelago of SW Finland, northern Baltic Sea, to model its distribution in a 5400 km2 area. We used depth, slope, turbidity, wave exposure and distance to sandy shores as environmental predictors, and compared a presence-absence method: generalised additive model (GAM), with a presence only method: maximum entropy (Maxent). Models were validated using semi-independent data sets. Both models performed well and described the niche of Z. marina fairly consistently, although there were differences in the way the models weighted the environmental variables, and consequently the spatial predictions differed somewhat. A notable outcome from the process was that with relatively equal model performance, the area actually predicted in geographical space can vary by twofold. The area predicted as suitable for Z. marina by the ensemble was almost half of that predicted by the GAM model by itself. The ensemble of model predictions increased the model predictive capability marginally and clearly shifted the model towards a more conservative prediction, increasing specificity, but at the same time sacrificing sensitivity. The environmental predictors selected into the final models described the potential distribution of Z. marina well and showed that in the northern Baltic the species occupies a narrow niche, typically thriving in shallow and moderately exposed to exposed locations near sandy shores. We conclude that a prediction based on a combination of model results provides a more realistic estimate of the core area suitable for Z. marina and should be the modelling approach implemented in conservation planning and management.

  13. A comparative evaluation of biological activities and bioactive compounds of the seagrasses Zostera marina and Zostera noltei from southern Portugal.

    PubMed

    Custódio, Luísa; Laukaityte, Simona; Engelen, Aschwin H; Rodrigues, Maria João; Pereira, Hugo; Vizetto-Duarte, Catarina; Barreira, Luísa; Rodríguez, Hortensia; Alberício, Fernando; Varela, João

    2016-01-01

    This work assessed the antioxidant potential, acetylcholinesterase (AChE) inhibition and the in vitro cytotoxic activity of extracts of the seagrasses Zostera marina and Zostera noltei collected from southern Portugal. The total phenolic contents (TPCs), the rosmarinic acid (RA) concentration (HPLC/DAD) and the fatty acid (FA) profile (GC/MS) are also described. Z. marina had the highest TPC, radical scavenging activity against DPPH radicals and copper chelating activity. Z. noltei had metal chelation capacity to copper and iron ions. None of the species was able to inhibit AChE. Both seagrasses had high levels of polyunsaturated FAs. Z. marina significantly and selectively reduced the viability of tumorous neuronal cells. Z. noltei was highly toxic for the three cell lines tested and was selective against hepatocarcinoma cells at the concentration of 100 μg/mL. RA was the main compound identified in Z. marina, but not in Z. noltei. PMID:26189828

  14. In Situ Carbon Stable Isotope Tracer Experiments Elucidate Carbon Translocation Rates and Allocation Patterns in Zostera marina L. (eelgrass)

    EPA Science Inventory

    The intertidal seagrass Zostera marina is an important species that provides critical habitat for a number of estuarine species. Despite its widespread distribution, there is limited information on seasonal patterns of carbon dynamics of plants growing in situ, particularly esti...

  15. Draft Genome Sequences of Two Pseudoalteromonas Strains Isolated from Roots and Leaf Blades of the Seagrass Zostera marina.

    PubMed

    Alexiev, Alexandra; Krusor, Megan L; Jospin, Guillaume; Lang, Jenna M; Eisen, Jonathan A; Coil, David A

    2016-01-01

    Here, we present the draft genome sequences for Pseudoalteromonas sp. strain UCD-33C and Pseudoalteromonas lipolytica UCD-48B. Pseudoalteromonas sp. UCD-33C was isolated from Zostera marina roots and P. lipolytica UCD-48B from Z. marina leaf blades, both collected in Woods Hole, MA. These assemblies contain 4,479,285 bp and 4,592,435 bp, respectively. PMID:26893412

  16. Draft Genome Sequences of Two Pseudoalteromonas Strains Isolated from Roots and Leaf Blades of the Seagrass Zostera marina

    PubMed Central

    Alexiev, Alexandra; Krusor, Megan L.; Jospin, Guillaume; Lang, Jenna M.; Coil, David A.

    2016-01-01

    Here, we present the draft genome sequences for Pseudoalteromonas sp. strain UCD-33C and Pseudoalteromonas lipolytica UCD-48B. Pseudoalteromonas sp. UCD-33C was isolated from Zostera marina roots and P. lipolytica UCD-48B from Z. marina leaf blades, both collected in Woods Hole, MA. These assemblies contain 4,479,285 bp and 4,592,435 bp, respectively. PMID:26893412

  17. Entamoeba marina n. sp.; a New Species of Entamoeba Isolated from Tidal Flat Sediment of Iriomote Island, Okinawa, Japan.

    PubMed

    Shiratori, Takashi; Ishida, Ken-Ichiro

    2016-05-01

    The genus Entamoeba includes anaerobic lobose amoebae, most of which are parasites of various vertebrates and invertebrates. We report a new Entamoeba species, E. marina n. sp. that was isolated from a sample of tidal flat sediment collected at Iriomote Island, Okinawa, Japan. Trophozoites of E. marina were 12.8-32.1 μm in length and 6.8-15.9 μm in width, whereas the cysts were 8.9-15.8 μm in diam. and contained four nuclei. The E. marina cells contained a rounded nucleus with a small centric karyosome and uniformly arranged peripheral chromatin. Although E. marina is morphologically indistinguishable from other tetranucleated cyst-forming Entamoeba species, E. marina can be distinguished from them based on the combination of molecular phylogenetic analyses using SSU rDNA gene and the difference of collection sites. Therefore, we propose E. marina as a new species of the genus Entamoeba. PMID:26452446

  18. Effect of marine mangrove Avicennia marina (Forssk.) Vierh against acetic acid-induced ulcerative colitis in experimental mice.

    PubMed

    Rise, C L Victoria; Prabhu, V Vinod; Guruvayoorappan, Chandrasekharan

    2012-01-01

    Ulcerative colitis and Crohn's disease are two conditions that have many features in common and are referred as inflammatory bowel disease (IBD). Patients with IBD are predisposed to colorectal cancer. This investigation evaluates the effect of marine mangrove Avicennia marina against acetic acid-induced colitis. The treatment of A marina extract significantly decreased the colonic lipid peroxides, glutathione peroxidase, and serum nitric oxide and significantly increased the colonic and erythrocyte superoxide dismutase and glutathione levels compared with colitis control. In addition, A marina extract significantly decreased the lesion score and wet colon weight compared with colitis control. Treatment with A marina extract reflects its therapeutic activity against UC by minimal damage of colonic epithelial cells compared with colitis control during histopathologic examination. These protective role of A marina extract against UC could be attributed to the presence of higher levels of decanoic acid, diethylhydroxylamine (DEHA), pentanoic acid, pyrrolidine, 4-chlorophenyl, thiazolidinones, and arabinopyranoside (flavonoid). These findings suggest that A marina extract could be useful as a potential (natural) therapeutic agent for IBD. PMID:23216642

  19. Root metabolic responses to short term anaerobiosis in the temperate sea grass Zostera marina L

    SciTech Connect

    Smith, R.D.; Pregnall, A.M.; Alberte, R.S.

    1986-04-01

    The submerged angiosperm Z. marina grows in highly reducing marine sediments. The roots experience periods of oxygen deprivation at night when photosynthesis-mediated oxygen transport from the shoot ceases. Despite this apparently inhospitable environment, Z. marina is extremely productive. This study sought to determine root metabolic responses to short term anaerobiosis. Roots were incubated for 4 h in the presence of /sup 14/C-sucrose. Amino acids and Krebs cycle intermediates were then extracted and label was quantified. Ethanol and lactate were the most heavily labeled metabolites following short term anaerobiosis. Despite increased synthesis of ethanol during anaerobiosis, endogenous levels do not increase significantly. Instead over 90% of newly synthesized ethanol is released by roots into the incubation medium. The authors conclude that release of ethanol by roots occurs naturally and prevents excessive accumulation of a potentially toxic product.

  20. Inhibition of five natural products from Chinese herbs on the growth of Chattonella marina.

    PubMed

    Liu, Fei; He, Zheng-Bing; Li, Hong-Ye; Liu, Jie-Sheng; Yang, Wei-Dong

    2016-09-01

    The effects of five natural products from Chinese herbs including evodiamine, curcumin, 4-methoxysalicylaldehyde, esculin hydrate, and gramine on the growth of Chattonella marina, one of the most noxious red tide algae, were observed. Among them, gramine exhibited the highest inhibitory rate with LC50, 96h of 0.51 mg/l. After exposure to gramine, the activities of superoxide dismutase (SOD) and catalase (CAT), and content of malondialdehyde (MDA) increased in C. marina, suggesting that gramine could induce microalgae oxidative stress. In addition, chlorophyll a and the maximum quantum yield of photosynthesis (Fv/Fm) decreased following exposure to gramine, indicating the inhibition of photosynthesis activity in the microalgae. Combined with the fast inhibition against the algal cells and environmentally friendly character of gramine, we proposed that gramine might be a potential algaecide against marine harmful algae and that the oxidative damage and photosynthesis inhibition might be responsible for the toxicity of gramine on harmful algae. PMID:27250087

  1. Antibacterial activity of extracts from Zostera marina against pathogens of Apostichopus japonicus skin ulceration disease

    NASA Astrophysics Data System (ADS)

    Liu, Yang; Jiang, Guoliang; Wu, Zhiqiang

    2010-03-01

    The purpose of this study was to investigate the antibacterial activity of extracts from Zostera marina against the pathogens of Apostichopus japonicus skin ulceration disease. When 95% ethanol (v/v) solvent was used to extract Zostera marina at 50°C, aqueous extract (ZA) showed obvious bacteriostatic effects on the tested bacterial strains (inhibition halo diameters between 8.23 mm and 13.62 mm), whereas the ethyl acetate extract (ZE) was almost inactive. The minimal inhibitory concentration (MIC) of ZA against four pathogens were homogeneous at 12.8 g L-1. ZA components were analyzed by thin layer chromatography (TLC) assay and six fractions were obtained. In another study, the six fractions showed inhibitory effects against the tested bacteria while their functions seemed to counteract the ZA activity.

  2. Use of passive samplers in pollution monitoring: a numerical approach for marinas.

    PubMed

    Yılmaz, A; Karacık, B; Henkelmann, B; Pfister, G; Schramm, K-W; Yakan, S D; Barlas, B; Okay, O S

    2014-12-01

    Triolein-containing semipermeable membrane devices (SPMDs) and butyl rubber (BR) based sorbents were employed as passive samplers in 14 coastal stations of Turkey including shipyards and marinas to characterize time-integrated levels of polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs) and their relationship to potential pollution sources. Passive samplers of SPMDs and BR sorbents were deployed for 30days in the spring of 2012. The maximum concentrations of total PAH and PCB compounds sequestered by SPMDs were 3338 ng g(-1) SPMD and 4247 pg g(-1) SPMD. (END)-I and DDT-related compounds were dominant OCP compounds for most of the sites in passive samplers. Total PAH concentrations in SPMDs were found 1.2 to 8 times higher than the concentrations in BRs. However, BR sorbents were able to sample some PAHs which could not be sampled by SPMDs. The concentrations of PCBs and OCPs in BRs were similar or higher than SPMDs. SPMD-data were used to estimate the average ambient water concentrations of the contaminants. Two existing theoretical approaches have been used to derive the concentrations of hydrophobic pollutants in the ambient waters. The results were found very similar and range from 7318 to 183864 pg L(-1) for PAHs, from 2 to 186 pg L(-1) for PCBs, and from 98 to 848 pg L(-1) for OCPs. Furthermore, a simple numerical model was designed to estimate the boat-related water concentrations in marinas by using the seawater data supplied by SPMDs. The model was mainly built on the water concentration and the capacities of a particular marina and then applied to two sites in the second marina. A good correlation was found between the model outputs and SPMD-water data. PMID:25108068

  3. Antiproliferative Activity and Apoptosis Induction of Crude Extract and Fractions of Avicennia Marina

    PubMed Central

    Momtazi-borojeni, Amir abbas; Behbahani, Mandana; Sadeghi-aliabadi, Hojjat

    2013-01-01

    Objective(s): Regarding the presence of many active biological constituents in Avicennia marina, the present investigation was carried out to study cytotoxic activity of crude methanol leave extract and column chromatographic fractions of A. marina against MDA-MB 231 cell line (human breast cancer cell) and HEK (Human embryonic kidney cell) line. Materials and Methods: The anticancer activity of crude methanol extract and sub-fractions were evaluated, using MTT assay. The induction of apoptosis was determined by analyzing DNA fragmentation in breast cancer cells treated with active fraction of crude methanol extract using agarose gel electrophoresis. To investigate molecular mechanism of apoptosis, gene expression levels of p53 and Bcl-2 were measured using quantitative real time PCR. Results: Fraction 10 was the most active fraction and was detected with HPLC as luteolin. The 50% cell cytotoxic concentration (CC50) of crude methanol extract and luteolin was 250 and 28 µg/ml, respectively. This fraction was found to be an apoptotic agent against MDA-MB 231 cells, which leads to causing DNA fragmentation. The mRNA expression level of Bcl-2 and p53 was significantly decreased and increased respectively in cancer cells treated by luteolin. Conclusion: The results suggested that Luteolin isolated from Avicennia marina could probably induce apoptosis on breast cancer cell line by the regulation of p53 and Bcl-2 pathways. PMID:24494074

  4. The cryptofauna of Zostera marina (L.): Abundance, biomass and population dynamics

    NASA Astrophysics Data System (ADS)

    Pihl Baden, Susanne

    Cryptofauna (epifauna passing a 2-mm but retained on a 0.2-mm mesh sieve) of Zostera marina on the Swedish west coast (58°N, 11°E) is dominated by crustaceans, mainly detritivorous tube-building amphipods and harpacticoids. Abundance and biomass of amphipods in two relatively unpolluted Z. marina beds were higher than any data from the literature, with maximum abundance of 80·10 3 ind·m -2 and 1 g AFDW·m -2 bottom. This is at least partly due to the small mesh size used in this investigation. The recruitment of the crustaceans started in late June and was continuous through the rest of the season, whereas the recruitment of the molluscs peaked in late June and July. In a Z. marina bed (Rixö) located 2 km from an oil refinery, the seasonal abundance of amphipods was 15% of the abundance in the other beds, whereas the remaining fauna had about the same density. In Rixö the percentage of female amphipod with empty brood pouches increased during the season. It is suggested that low abundances and fecundity of amphipods in Rixö could result from oil pollution.

  5. Genetic structure of eelgrass Zostera marina meadows in an embayment with restricted water flow

    USGS Publications Warehouse

    Munoz-Salazar, R.; Talbot, S.L.; Sage, G.K.; Ward, D.H.; Cabello-Pasini, Alejandro

    2006-01-01

    Genetic structure of the seagrass Zostera marina in a coastal lagoon with restricted water flow, and with heterogeneous water residence times and oceanographic characteristics, was assessed using 8 polymorphic microsatellite loci. Analyses of genetic differentiation (??) and Bayesian clustering suggested that the Z. marina population in San Quintin Bay (SQB) is genetically substructured, with at least 4 genetically different groups: (1) West Head, (2) Mouth, (3) East Arm, and (4) East Head. The greatest ?? value was observed between the most distant sites (?? = 0.095). The lowest values were found among sites closest to the mouth of the coastal lagoon (?? = 0.000 to 0.009). The maximum likelihood approach showed that the sites at the mouth have a mixed pattern of gene flow without a unidirectional pattern. In contrast, there was a clear pattern of asymmetrical gene flow from the mouth towards the West Head. These results suggested that the restriction of water flow at the heads, current pattern, and the distance between sites can reduce genetic flow and promote genetic differences within Z. marina meadows in small water embayments such as SQB. Though the population is genetically substructured and a 14 % decline in cover has been detected, this study did not show evidence of a recent genetic bottleneck. In contrast, mouth sites have experienced a recent expansion in their population size, and also perhaps a recent influx of rare alleles from genetically distinct immigrants. ?? Inter-Research 2006.

  6. A Zostera marina manganese superoxide dismutase gene involved in the responses to temperature stress.

    PubMed

    Liu, Jiao; Tang, Xuexi; Wang, You; Zang, Yu; Zhou, Bin

    2016-01-10

    Superoxide dismutase (SOD) is an essential enzyme playing a pivotal role in the protection mechanism against oxidative stress by reducing superoxide radicals. In the present study, the full-length cDNA sequence of manganese superoxide dismutase was identified from Zostera marina (ZmMnSOD) via raid amplification of cDNA ends (RACE) technique and expressed sequence tags (ESTs) analysis. The open reading frame (ORF) encoded a polypeptide of 254 amino acid residues, which shared 69%-77% similarity with previous identified SODs. Analysis of the deduced amino acid revealed conserved features, including functional domains, signature motifs and metal binding sites. Phylogenetic analysis revealed that ZmMnSOD was closer to the SODs from angiosperm than those from other organisms. The mRNA expression level of ZmMnSOD at different temperatures was investigated using real-time PCR and it was significantly up-regulated from 5°C to 15°C, and then dramatically down-regulated. The recombinant ZmMnSOD protein was purified and exhibited Mn(2+) ions dependency specific enzymatic activity and strong antioxidant activity over a wide temperature range. All these results indicate that ZmMnSOD is an authentic member of the plant SOD family and may play important roles in minimizing the effect of oxidative damage in Z. marina against temperature stress and affect the adaptability of Z. marina to global warming. PMID:26410038

  7. Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea.

    PubMed

    Alzubaidy, Hanin; Essack, Magbubah; Malas, Tareq B; Bokhari, Ameerah; Motwalli, Olaa; Kamanu, Frederick Kinyua; Jamhor, Suhaiza Ahmad; Mokhtar, Noor Azlin; Antunes, André; Simões, Marta Filipa; Alam, Intikhab; Bougouffa, Salim; Lafi, Feras F; Bajic, Vladimir B; Archer, John A C

    2016-02-01

    Mangroves are unique, and endangered, coastal ecosystems that play a vital role in the tropical and subtropical environments. A comprehensive description of the microbial communities in these ecosystems is currently lacking, and additional studies are required to have a complete understanding of the functioning and resilience of mangroves worldwide. In this work, we carried out a metagenomic study by comparing the microbial community of mangrove sediment with the rhizosphere microbiome of Avicennia marina, in northern Red Sea mangroves, along the coast of Saudi Arabia. Our results revealed that rhizosphere samples presented similar profiles at the taxonomic and functional levels and differentiated from the microbiome of bulk soil controls. Overall, samples showed predominance by Proteobacteria, Bacteroidetes and Firmicutes, with high abundance of sulfate reducers and methanogens, although specific groups were selectively enriched in the rhizosphere. Functional analysis showed significant enrichment in 'metabolism of aromatic compounds', 'mobile genetic elements', 'potassium metabolism' and 'pathways that utilize osmolytes' in the rhizosphere microbiomes. To our knowledge, this is the first metagenomic study on the microbiome of mangroves in the Red Sea, and the first application of unbiased 454-pyrosequencing to study the rhizosphere microbiome associated with A. marina. Our results provide the first insights into the range of functions and microbial diversity in the rhizosphere and soil sediments of gray mangrove (A. marina) in the Red Sea. PMID:26475934

  8. Habitat suitability analysis of eelgrass Zostera marina L. in the subtidal zone of Xiaoheishan Island

    NASA Astrophysics Data System (ADS)

    Zhou, Jian; Wang, Qixiang; Zhao, Wenxi; Yu, Daode; Guan, Shuguang

    2016-01-01

    We present a GIS-based habitat suitability index (HSI) model to identify suitable areas for Zostera marina L. restoration in the subtidal zone of Xiaoheishan Island. The controlling factors in the model, in order of importance, are Secchi depth, sediment composition, water temperature, salinity, current velocity, water depth and nutrient quality. Specific factor piecewise functions have been used to transform parameter values into normalized quality indexes. The weight of each factor was defined using expert knowledge and the analytic hierarchy process (AHP) method. All of the data thus obtained were interpolated using the inverse distance weighted (IDW) interpolation method to create maps for the entire region. In this study, the analysis of habitat suitability in the subtidal zone of Xiaoheishan Island was conducted for four seasons. According to the GIS-based HSI model, the optimal habitat of Zostera marina L. appears in spring, although habitat remains suitable all year round. On the whole, the optimum site for eelgrass restoration is located in the eastern region, followed by the western and southern regions. We believe that the GIS-based HSI model could be a promising tool to select sites for Zostera marina L. restoration and could also be applicable in other types of habitat evaluation.

  9. De Novo Assembly and Characterization of the Transcriptome of Seagrass Zostera marina Using Illumina Paired-End Sequencing

    PubMed Central

    Kong, Fanna; Li, Hong; Sun, Peipei; Zhou, Yang; Mao, Yunxiang

    2014-01-01

    Background The seagrass Zostera marina is a monocotyledonous angiosperm belonging to a polyphyletic group of plants that can live submerged in marine habitats. Zostera marina L. is one of the most common seagrasses and is considered a cornerstone of marine plant molecular ecology research and comparative studies. However, the mechanisms underlying its adaptation to the marine environment still remain poorly understood due to limited transcriptomic and genomic data. Principal Findings Here we explored the transcriptome of Z. marina leaves under different environmental conditions using Illumina paired-end sequencing. Approximately 55 million sequencing reads were obtained, representing 58,457 transcripts that correspond to 24,216 unigenes. A total of 14,389 (59.41%) unigenes were annotated by blast searches against the NCBI non-redundant protein database. 45.18% and 46.91% of the unigenes had significant similarity with proteins in the Swiss-Prot database and Pfam database, respectively. Among these, 13,897 unigenes were assigned to 57 Gene Ontology (GO) terms and 4,745 unigenes were identified and mapped to 233 pathways via functional annotation against the Kyoto Encyclopedia of Genes and Genomes pathway database (KEGG). We compared the orthologous gene family of the Z. marina transcriptome to Oryza sativa and Pyropia yezoensis and 11,667 orthologous gene families are specific to Z. marina. Furthermore, we identified the photoreceptors sensing red/far-red light and blue light. Also, we identified a large number of genes that are involved in ion transporters and channels including Na+ efflux, K+ uptake, Cl− channels, and H+ pumping. Conclusions Our study contains an extensive sequencing and gene-annotation analysis of Z. marina. This information represents a genetic resource for the discovery of genes related to light sensing and salt tolerance in this species. Our transcriptome can be further utilized in future studies on molecular adaptation to abiotic stress in

  10. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest - CERF

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Z. marina, and introduced, Z. japonica. Z. marina is protected by State and Federal laws as essential fish habitat. Z. japonica is considered “invasive” and therefore, ecologicall...

  11. Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.

    PubMed

    Romanenko, Lyudmila A; Tanaka, Naoto; Svetashev, Vassilii I; Falsen, Enevold

    2013-01-01

    A group of five Gram-negative, aerobic, halotolerant, non-pigmented bacteria isolated from shallow sediment samples and invertebrate specimens collected from the Gulf of Alaska and the Sea of Japan was subjected to taxonomic study. On the basis of 16S rRNA gene sequence analysis, the novel isolates were affiliated to the genus Cobetia, sharing the highest sequence similarity of 99.3-99.9 % with Cobetia marina DSM 4741(T). DNA-DNA hybridization experiments between and among the novel strains and C. marina DSM 4741(T) and Cobetia crustatorum JCM 15644(T) revealed that the five strains represent three separate genospecies, which could be differentiated in their morphological, physiological and biochemical characteristics. Halomonas halodurans NBRC 15607(T) was included in this study as it has recently been reported to exhibit high 16S rRNA gene sequence similarity to C. marina DSM 4741(T), and it showed a high DNA relatedness value of 96 % with C. marina DSM 4741(T), indicating that they belong to the same species. On the basis of phylogenetic analysis, DNA-DNA hybridization and phenotypic characterization, three novel species are proposed, named Cobetia amphilecti sp. nov. (type strain KMM 1561(T) = NRIC 0815(T) = CCUG 49560(T)), Cobetia litoralis sp. nov. (type strain KMM 3880(T) =NRIC 0814(T) =CCUG 49563(T)) and Cobetia pacifica sp. nov. (type strain KMM 3879(T) = NRIC 0813(T) = CCUG 49562(T)). It is also proposed that Halomonas halodurans is a later heterotypic synonym of Cobetia marina, and emended descriptions of the genus Cobetia and the species Cobetia marina are provided. PMID:22427450

  12. Current status and ecological roles of Zostera marina after recovery from large-scale reclamation in the Nakdong River estuary, Korea

    NASA Astrophysics Data System (ADS)

    Park, Sang Rul; Kim, Jong-Hyeob; Kang, Chang-Keun; An, Soonmo; Chung, Ik Kyo; Kim, Jeong Ha; Lee, Kun-Seop

    2009-01-01

    Large Zostera marina meadows (covering 13.6 km 2) existed in the Nakdong River estuary on the south coast of Korea until the mid-1980s, but these Z. marina beds nearly disappeared due to reclamation of adjacent mud flats for the construction of a port and industrial complex during the late 1980s. Partial recovery of Z. marina meadows occurred recently, and Z. marina coverage of about 0.3 km 2 was observed in this estuary. In this study, shoot morphology, density, biomass, productivity, and tissue nutrient content were measured to evaluate the current status of the Z. marina meadows by comparing these data to those for persistent seagrass meadows in similar geographical areas. Additionally, we examined the ecological roles of Z. marina in this estuary after recovery from the large-scale disturbance. Shoot density (151 shoots m -2) and total biomass (141 g DW m -2) in the estuary were similar to those reported from other Z. marina meadows in Korea. Annual leaf production (1726 g DW m -2 y -1) was higher than generally observed for Z. marina in other geographical areas. These results imply that the existing Z. marina meadows in this estuary have adjusted to local environmental conditions that changed after large-scale reclamation. Estimated annual whole plant carbon (C) and nitrogen (N) incorporations based on shoot production and tissue C and N content were 810.0 g C m -2 y -1 and 59.7 g N m -2 y -1, respectively. These values were equivalent to 2.4 × 10 5 kg C y -1 and 1.8 × 10 4 kg N y -1 for all Z. marina beds in the Nakdong River estuary. This high C and N incorporation into Z. marina tissues suggests that existing Z. marina meadows play important roles in C and N cycles in this estuary. Although the currently existing Z. marina beds in this estuary are persisting and play an important ecological role, anthropogenic factors that cause seagrass declines still affect the estuary. Thus, effective management and monitoring of Z. marina beds and environmental

  13. Evaluation of Protective Efficacy of Avicennia marina (Forssk.) Vierh Leaves against Complete Freund᾽s Adjuvant-induced Arthritis in Wistar

    PubMed Central

    Zamani Gandomani, Mahdi; Forouzandeh Malati, Elaheh

    2014-01-01

    Aviecennia marina (Avicenniaceae) is an endemic plant that widely distributed in the Southern parts of Iran. This plant has been used as treatment of rheumatism arthritis among the inhabitants of Southern parts of Iran. The Avicennia marina hydroalcoholic extract was prepared and its protective efficacy was investigated using measurement of ankle diameter, total WBC and RBC count, ESR, and Pro-inflammatory cytokines levels in the complete Freund᾽s adjuvant (CFA)-induced arthritic rat. The increment in ESR and total WBC, reduction in RBC count and hemoglobin levels observed in the arthritic animals were also found to be significantly restored in HEA treated rats. A. marina at 400 mg/Kg significantly decreases the serum pro-inflammatory cytokines as well as normalizes ankle diameter of CFA rats. A. marina (400 mg/Kg) significantly normalizes changes observed in arthritic rats to near normal conditions, indicates that A. marina has promising protective efficacy against arthritic rats. PMID:25276195

  14. Biofilm Growth and Near-Infrared Radiation-Driven Photosynthesis of the Chlorophyll d-Containing Cyanobacterium Acaryochloris marina

    PubMed Central

    Behrendt, Lars; Schrameyer, Verena; Qvortrup, Klaus; Lundin, Luisa; Sørensen, Søren J.; Larkum, Anthony W. D.

    2012-01-01

    The cyanobacterium Acaryochloris marina is the only known phototroph harboring chlorophyll (Chl) d. It is easy to cultivate it in a planktonic growth mode, and A. marina cultures have been subject to detailed biochemical and biophysical characterization. In natural situations, A. marina is mainly found associated with surfaces, but this growth mode has not been studied yet. Here, we show that the A. marina type strain MBIC11017 inoculated into alginate beads forms dense biofilm-like cell clusters, as in natural A. marina biofilms, characterized by strong O2 concentration gradients that change with irradiance. Biofilm growth under both visible radiation (VIS, 400 to 700 nm) and near-infrared radiation (NIR, ∼700 to 730 nm) yielded maximal cell-specific growth rates of 0.38 per day and 0.64 per day, respectively. The population doubling times were 1.09 and 1.82 days for NIR and visible light, respectively. The photosynthesis versus irradiance curves showed saturation at a photon irradiance of Ek (saturating irradiance) >250 μmol photons m−2 s−1 for blue light but no clear saturation at 365 μmol photons m−2 s−1 for NIR. The maximal gross photosynthesis rates in the aggregates were ∼1,272 μmol O2 mg Chl d−1 h−1 (NIR) and ∼1,128 μmol O2 mg Chl d−1 h−1 (VIS). The photosynthetic efficiency (α) values were higher in NIR-irradiated cells [(268 ± 0.29) × 10−6 m2 mg Chl d−1 (mean ± standard deviation)] than under blue light [(231 ± 0.22) × 10−6 m2 mg Chl d−1]. A. marina is well adapted to a biofilm growth mode under both visible and NIR irradiance and under O2 conditions ranging from anoxia to hyperoxia, explaining its presence in natural niches with similar environmental conditions. PMID:22467501

  15. Photosystem Trap Energies and Spectrally-Dependent Energy-Storage Efficiencies in the Chl d-Utilizing Cyanobacterium, Acaryochloris Marina

    NASA Technical Reports Server (NTRS)

    Mielke, Steven P.; Kiang, Nancy Y.; Blankenship, Robert E.; Mauzerall, David

    2012-01-01

    Acaryochloris marina is the only species known to utilize chlorophyll (Chl) d as a principal photopigment. The peak absorption wavelength of Chl d is redshifted approx. 40 nm in vivo relative to Chl a, enabling this cyanobacterium to perform oxygenic phototrophy in niche environments enhanced in far-red light. We present measurements of the in vivo energy-storage (E-S) efficiency of photosynthesis in A. marina, obtained using pulsed photoacoustics (PA) over a 90-nm range of excitation wavelengths in the red and far-red. Together with modeling results, these measurements provide the first direct observation of the trap energies of PSI and PSII, and also the photosystem-specific contributions to the total E-S efficiency. We find the maximum observed efficiency in A. marina (40+/-1% at 735 nm) is higher than in the Chl a cyanobacterium Synechococcus leopoliensis (35+/-1% at 690 nm). The efficiency at peak absorption wavelength is also higher in A. marina (36+/-1% at 710 nm vs. 31+/-1% at 670 nm). In both species, the trap efficiencies are approx. 40% (PSI) and approx. 30% (PSII). The PSI trap in A. marina is found to lie at 740+/-5 nm, in agreement with the value inferred from spectroscopic methods. The best fit of the model to the PA data identifies the PSII trap at 723+/-3 nm, supporting the view that the primary electron-donor is Chl d, probably at the accessory (ChlD1) site. A decrease in efficiency beyond the trap wavelength, consistent with uphill energy transfer, is clearly observed and fit by the model. These results demonstrate that the E-S efficiency in A. marina is not thermodynamically limited, suggesting that oxygenic photosynthesis is viable in even redder light environments.

  16. Nutrient and caloric dynamics in Avicennia marina leaves at different developmental and decay stages in Zhangjiang River Estuary, China

    NASA Astrophysics Data System (ADS)

    Zhou, Hai-Chao; Wei, Shu-Dong; Zeng, Qi; Zhang, Li-Hua; Tam, Nora Fung-yee; Lin, Yi-Ming

    2010-03-01

    Avicennia marina is a typical mangrove species in the subtropical coastlines of China. The main objective of this study was to assess nutrient and caloric dynamics in A. marina leaves at different developmental and decay stages. Decomposition studies using litter bags suggested that the time required for the loss of half of the initial dry weight ( t50) was 19 days. The extracts of A. marina leaves contained non-tannin phenolics and tannin phenolics (hydrolysable tannin), but no condensed tannin. Non-tannin phenolics and tannin phenolics contents did not differ significantly from each other at various developmental stages, but decreased rapidly during leaf decomposition. Avicennia marina leaves had high N levels, and both N and P concentrations decreased significantly during senescence. During decomposition, N concentration of the leaf litter increased gradually but the phosphorus concentration showed a decrease in the first week, and both N and P remained the same towards the end of the experiment. The gross caloric value (GCV) of mature leaves was significantly higher than those of young and senescent leaves, while ash-free caloric value (AFCV) did not change significantly during leaf development and senescence. During leaf decomposition, both GCV and AFCV increased gradually and remained the same at late stages. In subtropical Zhangjiang River Estuary, high N levels and lack of condensed tannins in A. marina leaves were responsible for the fast rate of decay. Non-tannin phenolics and tannin phenolics had no great effect on rate of decay. Nitrogen resorption during leaf senescence, and high litter decomposition followed by nitrogen immobilization are the important nutrient conservation strategy for A. marina.

  17. Heavy metal contamination in sediments and mangroves from the coast of Red Sea: Avicennia marina as potential metal bioaccumulator.

    PubMed

    Usman, Adel R A; Alkredaa, Raed S; Al-Wabel, M I

    2013-11-01

    The aim of this study was to investigate the concentrations and pollution status of heavy metals (Cu, Cd, Ni, Pb, Zn and Cr) in the mangrove surface sediments from the Farasan Island, Coast of Red Sea, Saudi Arabia. The ability of mangroves (Avicennia marina) to accumulate and translocate heavy metal within their different compartments was also investigated. Five sampling sites were chosen for collection of sediments and different compartments (leaf, branch and root) of A. marina. The results showed that the maximum and average concentrations of Cd, Cu and Pb in the studied area exceeded their world average concentration of shale. Additionally, only the maximum concentration of Zn exceeded its world average shale concentration. Based on the quality guidelines of sediment (SQGs), the collected sediment samples were in moderate to heavy rate for Cu, non-polluted to heavy rate for Pb and Zn, and non-polluted to moderate rate for Cr and Ni. The average metal concentrations of A. marina in the studied area were observed in the order Cu (256.0-356.6mgkg(-1))>Zn (29.5-36.8mgkg(-1))>Cr (8.15-14.9mgkg(-1))>Ni (1.37-4.02mgkg(-1))>Cd (not detectable-1.04mgkg(-1))>Pb (not detectable). Based on bio-concentration factors (BCF), their most obtained values were considered too high (>1), suggesting that A. marina can be considered as a high-efficient plant for bioaccumulation of heavy metals. Among all metals, Cu and Cr were highly bio-accumulated in different parts of A. marina. In terms of heavy metal contamination control via phyto-extraction, our findings suggest also that A. marina may be classified as potential accumulator for Cu in aboveground parts, as indicated by higher metal accumulation in the leaves combined with bio-concentration factor (BCF) and translocation factor (TF) values >1. PMID:24011858

  18. Variation in toxin compositions of two harmful raphidophytes, Chattonella antiqua and Chattonella marina, at different salinities.

    PubMed

    Haque, Shahroz Mahean; Onoue, Yoshio

    2002-01-01

    Toxin compositions of the two species of raphidophytes, Chattonella antiqua (Hada) Ono and Chattonella marina (Subrahmanyan) Hara et Chihara, were investigated at different salinities under laboratory conditions. C. antiqua contained toxin components CaTx-I, CaTx-II, CaTx-III, and CaTx-IV, which corresponded to brevetoxin components PbTx-1, PbTx-2, PbTx-3, and oxidized PbTx-2. Similarly, C. marina included CmTx-I, CmTx-II, CmTx-III, and CmTx-IV corresponding to PbTx-2, PbTx-9, PbTx-3, and oxidized PbTx-2. Toxin yields in both species varied markedly with a change in salinity concentration. In C. antiqua CaTx-I, CaTx-II, and CaTx-III peaked at 25 P.P.t. with yields of 0.99, 0.42, and 2.90 pg/cell, but the highest yield (2.35 pg/cell) of CaTx-IV was attained at 30 P.P.t. The yields of all CaTx components decreased sharply at salinities exceeding 30 P.P.t. On the other hand, C. marina yielded higher proportions of CmTx-I (0.55 pg/cell) and CmTx-III (2.50 pg/cell) at 25 P.P.t. However, CmTx-IV was present in its highest amount (1.65 pg/cell) at 30 P.P.t., as seen in C. antiqua. A small amount of CmTx-II was also detected at 20 P.P.t.-35 P.P.t. Both species showed the highest ichthyotoxicities at 25 P.P.t., at which the maximum cell division rate was obtained. PMID:11979589

  19. Influence of light, temperature and salinity on dissolved organic carbon exudation rates in Zostera marina L.

    PubMed Central

    2012-01-01

    Background Marine angiosperms, seagrasses, are sentinel species of marine ecosystem health and function. Seagrass carbon budgets provide insight on the minimum requirements needed to maintain this valuable resource. Carbon budgets are a balance between C fixation, growth, storage and loss rates, most of which are well characterized. However, relatively few measurements of dissolved organic carbon (DOC) leaf exudation or rhizodeposition rates exist for most seagrass species. Here I evaluate how eelgrass (Zostera marina L.) DOC exudation is affected by a single factor manipulation (light, temperature or salinity). Eelgrass plants were hydroponically exposed to treatments in experimental chambers (separate leaf and rhizome/root compartments) with artificial seawater medium. Regression analysis of changes in the DOC concentration through time was used to calculate DOC exudation rates. Results Exudation rates were similar across all treatments in all experiments. For all experiments, pooled leaf DOC exudation ranged between 0.032 and 0.069 mg C gdw-1 h-1, while rhizodeposition ranged between 0.024 and 0.045 mg C gdw-1 h-1. These rates are consistent with previously published values and provide first-order estimates for mechanistic models. Conclusions Zostera marina carbon losses from either leaf exudation or rhizodeposition account for a small proportion of gross primary production (1.2-4.6%) and appear to be insensitive to short-term (e.g., hours to days) environmental variations in chamber experiments. Based on these preliminary experiments, I suggest that Z. marina DOC exudation may be a passive process and not an active transport process. PMID:22938529

  20. Light-Promoted Rhodopsin Expression and Starvation Survival in the Marine Dinoflagellate Oxyrrhis marina

    PubMed Central

    Guo, Zhiling; Zhang, Huan; Lin, Senjie

    2014-01-01

    The discovery of microbial rhodopsins in marine proteobacteria changed the dogma that photosynthesis is the only pathway to use the solar energy for biological utilization in the marine environment. Although homologs of these rhodopsins have been identified in dinoflagellates, the diversity of the encoding genes and their physiological roles remain unexplored. As an initial step toward addressing the gap, we conducted high-throughput transcriptome sequencing on Oxyrrhis marina to retrieve rhodopsin transcripts, rapid amplification of cDNA ends to isolate full-length cDNAs of dominant representatives, and quantitative reverse-transcription PCR to investigate their expression under varying conditions. Our phylogenetic analyses showed that O. marina contained both the proton-pumping type (PR) and sensory type (SR) rhodopsins, and the transcriptome data showed that the PR type dominated over the SR type. We compared rhodopsin gene expression for cultures kept under light: dark cycle and continuous darkness in a time course of 24 days without feeding. Although both types of rhodopsin were expressed under the two conditions, the expression levels of PR were much higher than SR, consistent with the transcriptomic data. Furthermore, relative to cultures kept in the dark, rhodopsin expression levels and cell survival rate were both higher in cultures grown in the light. This is the first report of light-dependent promotion of starvation survival and concomitant promotion of PR expression in a eukaryote. While direct evidence needs to come from functional test on rhodopsins in vitro or gene knockout/knockdown experiments, our results suggest that the proton-pumping rhodopsin might be responsible for the light-enhanced survival of O. marina, as previously demonstrated in bacteria. PMID:25506945

  1. Genetic diversity in three populations of Avicennia marina along the eastcoast of India by RAPD markers.

    PubMed

    Hazarika, Dimendra; Thangaraj, M; Sahu, Sunil Kumar; Kathiresan, K

    2013-05-01

    Genetic diversity was analysed in three populations of the mangrove species, Avicennia marina by using random amplified polymorphic DNA-polymerase chain reaction (RAPD-PCR). Ten random decamer primers were used to score the diversity from three locations of eastcoast of India: Parangipettai (Tamil Nadu), Kakkinada (Andhra Pradesh) and Sundarbans (West Bengal). These primers produced 388 scorable DNA fragments, of which 252 (64.98%) were polymorphic, 182 (46.90%) were monomorphic, and 14 (3.61%) were unique. RAPD banding patterns displayed variations between and within the populations, while, there was no morphological variation. PMID:24617156

  2. Burial of Zostera marina seeds in sediment inhabited by three polychaetes: Laboratory and field studies

    NASA Astrophysics Data System (ADS)

    Delefosse, M.; Kristensen, E.

    2012-07-01

    The large number of seeds produced by eelgrass, Zostera marina, provides this plant with a potential to disperse widely and colonise new areas. After dispersal, seeds must be buried into sediment for assuring long-term survival, successful germination and safe seedling development. Seeds may be buried passively by sedimentation or actively through sediment reworking by benthic fauna. We evaluated the effect of three polychaetes on the burial rate and depth of eelgrass seeds. Burial was first measured in controlled laboratory experiments using different densities of Nereis (Hediste) diversicolor (400-3200 ind m- 2), Arenicola marina (20-80 ind m- 2), and the invasive Marenzelleria viridis (400-1600 ind m- 2). The obtained results were subsequently compared with burial rates of seed mimics in experimental field plots (1 m2) dominated by the respective polychaetes. High recovery of seeds in the laboratory (97-100%) suggested that none of these polychaetes species feed on eelgrass seeds. N. diversicolor transported seeds rapidly (< 1 day) into its burrow, where they remained buried at a median depth of 0.5 cm. A. marina and M. viridis buried seeds by depositing their faeces on top of the sediment. At their highest abundance, A. marina and M. viridis buried seeds to a median depth of 6.7 cm and 0.5 cm, respectively, after a month. The burial efficiency and depth of these species were, in contrast to N. diversicolor, dependent on animal abundance. Only 2% of seed mimics casted in the field plots were recovered, suggesting that physical dispersion by waves and currents was considerably important for horizontal distribution. However, polychaete affected significantly the vertical distribution of seeds. Overall the effects of these three polychaetes indicate that benthic macroinvertebrates may significantly impact eelgrass seed bank at the ecosystem scale. Some species have a positive effect by burying seeds to shallow depths and thereby reducing seed predation and

  3. Two Unrelated 8-Vinyl Reductases Ensure Production of Mature Chlorophylls in Acaryochloris marina

    PubMed Central

    Chen, Guangyu E.; Hitchcock, Andrew; Jackson, Philip J.; Chaudhuri, Roy R.; Dickman, Mark J.; Hunter, C. Neil

    2016-01-01

    ABSTRACT The major photopigment of the cyanobacterium Acaryochloris marina is chlorophyll d, while its direct biosynthetic precursor, chlorophyll a, is also present in the cell. These pigments, along with the majority of chlorophylls utilized by oxygenic phototrophs, carry an ethyl group at the C-8 position of the molecule, having undergone reduction of a vinyl group during biosynthesis. Two unrelated classes of 8-vinyl reductase involved in the biosynthesis of chlorophylls are known to exist, BciA and BciB. The genome of Acaryochloris marina contains open reading frames (ORFs) encoding proteins displaying high sequence similarity to BciA or BciB, although they are annotated as genes involved in transcriptional control (nmrA) and methanogenesis (frhB), respectively. These genes were introduced into an 8-vinyl chlorophyll a-producing ΔbciB strain of Synechocystis sp. strain PCC 6803, and both were shown to restore synthesis of the pigment with an ethyl group at C-8, demonstrating their activities as 8-vinyl reductases. We propose that nmrA and frhB be reassigned as bciA and bciB, respectively; transcript and proteomic analysis of Acaryochloris marina reveal that both bciA and bciB are expressed and their encoded proteins are present in the cell, possibly in order to ensure that all synthesized chlorophyll pigment carries an ethyl group at C-8. Potential reasons for the presence of two 8-vinyl reductases in this strain, which is unique for cyanobacteria, are discussed. IMPORTANCE The cyanobacterium Acaryochloris marina is the best-studied phototrophic organism that uses chlorophyll d for photosynthesis. Unique among cyanobacteria sequenced to date, its genome contains ORFs encoding two unrelated enzymes that catalyze the reduction of the C-8 vinyl group of a precursor molecule to an ethyl group. Carrying a reduced C-8 group may be of particular importance to organisms containing chlorophyll d. Plant genomes also contain orthologs of both of these genes; thus, the

  4. Rhinella marina (Amphibia: Bufonidae) Versus Rhabdias paraensis (Nematoda: Rhabdiasidae): Expanding the View on a Natural Infection.

    PubMed

    Santos, Jeannie Nascimento Dos; da Silva, Djane Clarys Baia; Feitosa, Lucas Aristóteles das Neves; Furtado, Adriano Penha; Giese, Elane Guerreiro; de Vasconcelos Melo, Francisco Tiago

    2016-06-01

    Amphibian and reptile lungs are frequently infected with Rhabdias parasites, and this condition ultimately leads to reduced survival, performance, and growth because of granulomatous inflammation, nodule formation, and nematodal pneumonia onset. Here we investigate the histopathological features of naturally infected Rhinella marina by the lung nematode Rhabdias paraensis. A total of 10 host animals were captured in peridomiciliar areas in the eastern Brazilian Amazon, and anatomic-histological analyses were performed on both the infected and non-infected lungs of these amphibians. Helminths were usually found within the secondary and primary septa of infected lungs whereas parasites were not detected within vessels or adhering to tissues. In addition, we observed discrete erythrocytes, diapedesis foci, few granulocytes and erythrocytes in the interseptal spaces, discrete cell infiltration, and a small number of melanomacrophages, and no granulomas or cysts were observed. New aspects related to changes in tissue and helminth-host interactions are discussed for the relationship of R. paraensis × Rhi. marina from the Amazon region. PMID:26959813

  5. Effects of barium and cadmium on the population development of the marine nematode Rhabditis (Pellioditis) marina.

    PubMed

    Lira, V F; Santos, G A P; Derycke, S; Larrazabal, M E L; Fonsêca-Genevois, V G; Moens, T

    2011-10-01

    Offshore oil and gas drilling often involves the use of fluids containing barium and traces of other heavy metals. These may affect the environment, but information on their toxicity to benthic biota remains scant. Here, we present results of a 10-day bioassay with the marine nematode Rhabditis (Pellioditis) marina at different loads of barium (0-10 ,000 ppm nominal concentrations) and cadmium (0-12 ppm) in the range of concentrations reported from drilling-impacted sediments. Barium did not affect the fitness and population development of R. (P.) marina at concentrations up to 300 ppm, but did cause a decrease in population abundance and an increase in development time from concentrations of 400-2000 ppm onwards. Increased mortality occurred at 4800 ppm Ba. For cadmium, LOEC and EC₅₀ values for total population abundance were 2.95 and 8.82 ppm, respectively. Cd concentrations as low as 2.40 to 2.68 caused a decrease in the abundance of adult nematodes, indicating that assays covering more generations would likely demonstrate yet more pronounced population-level effects. Our results indicate that oil and gas drilling activities may potentially have important implications for the meiobenthos through the toxicity of barium and associated metals like cadmium. PMID:21855994

  6. Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)

    SciTech Connect

    Klenk, Hans-Peter; Lu, Megan; Lucas, Susan; Copeland, A; Pitluck, Sam; Goodwin, Lynne A.; Han, Cliff; Tapia, Roxanne; Brambilla, Evelyne-Marie; Potter, Gabriele; Land, Miriam L; Ivanova, N; Rohde, Manfred; Goker, Markus; Detter, J. Chris; Li, Wen-Jun; Kyrpides, Nikos C; Woyke, Tanja

    2012-01-01

    Saccharomonospora marina Liu et al. 2010 is a member to the genomically so far poorly characterized genus Saccharomonospora in the family Pseudonocardiaceae. Members of the genus Sacharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Next to S. viridis and S. azurea, S. marina is the third member in the genus Saccharomonospora for with a completely sequenced (permanent draft status) type strain genome will be published. Here we describe the features of this organism, together with the complete genome sequence, and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

  7. The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea.

    PubMed

    Olsen, Jeanine L; Rouzé, Pierre; Verhelst, Bram; Lin, Yao-Cheng; Bayer, Till; Collen, Jonas; Dattolo, Emanuela; De Paoli, Emanuele; Dittami, Simon; Maumus, Florian; Michel, Gurvan; Kersting, Anna; Lauritano, Chiara; Lohaus, Rolf; Töpel, Mats; Tonon, Thierry; Vanneste, Kevin; Amirebrahimi, Mojgan; Brakel, Janina; Boström, Christoffer; Chovatia, Mansi; Grimwood, Jane; Jenkins, Jerry W; Jueterbock, Alexander; Mraz, Amy; Stam, Wytze T; Tice, Hope; Bornberg-Bauer, Erich; Green, Pamela J; Pearson, Gareth A; Procaccini, Gabriele; Duarte, Carlos M; Schmutz, Jeremy; Reusch, Thorsten B H; Van de Peer, Yves

    2016-02-18

    Seagrasses colonized the sea on at least three independent occasions to form the basis of one of the most productive and widespread coastal ecosystems on the planet. Here we report the genome of Zostera marina (L.), the first, to our knowledge, marine angiosperm to be fully sequenced. This reveals unique insights into the genomic losses and gains involved in achieving the structural and physiological adaptations required for its marine lifestyle, arguably the most severe habitat shift ever accomplished by flowering plants. Key angiosperm innovations that were lost include the entire repertoire of stomatal genes, genes involved in the synthesis of terpenoids and ethylene signalling, and genes for ultraviolet protection and phytochromes for far-red sensing. Seagrasses have also regained functions enabling them to adjust to full salinity. Their cell walls contain all of the polysaccharides typical of land plants, but also contain polyanionic, low-methylated pectins and sulfated galactans, a feature shared with the cell walls of all macroalgae and that is important for ion homoeostasis, nutrient uptake and O2/CO2 exchange through leaf epidermal cells. The Z. marina genome resource will markedly advance a wide range of functional ecological studies from adaptation of marine ecosystems under climate warming, to unravelling the mechanisms of osmoregulation under high salinities that may further inform our understanding of the evolution of salt tolerance in crop plants. PMID:26814964

  8. Biosynthesis of silver nanoparticles from mangrove plant (Avicennia marina) extract and their potential mosquito larvicidal property.

    PubMed

    Balakrishnan, Srinivasan; Srinivasan, Muthukumarasamy; Mohanraj, Jeyaraj

    2016-09-01

    To identify the larvicidal activities of silver nanoparticles synthesised with Avicennia marina leaf extract against the larvae of Aedes aegypti and Anopheleus stephensi, in vitro larvicidal activities such as LC50 and LC90 were assessed. Further, characterisation such as UV and FTIR analysis were carried out for the synthesised silver nanoparticles. The LC50 value of the synthesised silver nanoparticles was identified as 4.374 and 7.406 mg/L for An. stephensi and Ae. aegypti larvae respectively. Further, the LC90 values are also identified as 4.928 and 9.865 mg/L for An. stephensi and Ae. aegypti species respectively. The synthesised silver nanoparticles have maximum absorption at 420 nm with the average size of 60-95 nm. The FTIR data showed prominent peaks in (3940.57, 3929.00, 3803.63, 3712.97, 2918.30, 2231.64, 1610.50, 1377.17, 1257.59, 1041.59, 1041.56, 775.38, 667.37 and 503.21) different ranges. The biosynthesis of silver nanoparticles with leaf aqueous extract of A. marina provides potential source for the larvicidal activity against mosquito borne diseases. The present study proved the mosquitocidal properties of silver nanoparticles synthesised from mangroves of Vellar estuary. This is an ideal eco-friendly approach for the vector control programs. PMID:27605825

  9. Potential sources of bacteriological pollution for two bays with marinas in Trinidad.

    PubMed

    Bullock, Christine Ann; Moonesar, Indar

    2005-05-01

    Welcome Bay and Chaguaramas Bay in the northwest peninsula of Trinidad contain large marinas and smaller sections of bathing beaches. Bacteriological surveys were conducted at both bays to assess water quality and to determine potential sources of pollution. These surveys were conducted during the wet season of 1996 and the dry season of 1997. Eleven sample stations were established at Welcome Bay and 12 at Chaguaramas Bay. Freshwater samples were collected from rivers and drains within the survey area. Marine water samples were collected from marinas, bathing beaches and inshore and outer areas at both bays. Five water samples were collected from each sampling station during the wet season of 1996 and six during the dry season of 1997. The membrane filter technique was used to determine faecal coliform and Escherichia coli levels in all samples. There was a seasonal effect on water quality, with significantly higher faecal coliform levels in the wet season, when water quality was not in compliance with international standards. This represents a potential health risk in bathing areas. Water quality was better at the outer area of both bays. Water quality at the inner bay areas was most likely adversely affected by land-based sources of pollution identified in this study. These sources include three drains and two rivers, which discharged into the bays. Yachts were apparently not a source of sewage pollution: there was no significant relationship between yacht number and faecal coliform levels. PMID:17465149

  10. Identification and subcellular localization of starch-metabolizing enzymes in the green alga Dunaliella marina.

    PubMed

    Kombrink, E; Wöber, G

    1980-07-01

    Enzymes of starch synthesis and degradation were identified in crude extracts of the unicellular green alga Dunaliella marina (Volvocales). By polyacrylamide gel electrophoresis and specific staining for enzyme activities, 4 multiple forms of starch synthase, 2 amylases, and at least 2 forms of α-glucan phosphorylase were visible. Using specific α-glucans incorporated into the gel before electrophoresis we have tentatively correlated α-amylase and β-amylase with both hydrolytic activities. The activities of α-glucan phosphorylase and amylase(s) were measured quantitatively in crude extracts, and the concomitant action of α-glucan phosphorylase and amylase(s) was found to account for the fastest rate of starch mobilization observed in vivo. Isolated chloroplasts retained both typical plastid marker enzymes and ADPglucose pyrophosphorylase, starch synthase, amylase(s), and α-glucan phosphorylase to a similar percentage. Gel electrophoretic analysis followed by staining for enzyme activity of a stromal fraction resulted in a pattern of multiple forms of starch-metabolizing enzymes analogous to that found in a crude extract. We interpret the combined data as indicating the exclusive location in vivo of starch-metabolizing enzymes in chloroplasts of D. marina. PMID:24306243

  11. Fungi and Bacteria in or on Leaves of Eelgrass (Zostera marina L.) from Chesapeake Bay †

    PubMed Central

    Newell, Steven Y.

    1981-01-01

    Samples of green and brown leaves of eelgrass (Zostera marina L.) were incubated in seawater without an additional carbon source. Parallel leaf samples were used for acridine orange bacterial counting and water-soluble aniline blue estimation of fungal biovolume. The incubations produced no evidence that there is an eelgrass counterpart for the chytridialean symbiont which is very common in turtlegrass (Thalassia testudinum König). Sterile mycelium (i.e., living mycelium without identifiable propagules) was the most prevalent fungal form on incubated samples from submerged sites, whereas Dendryphiella salina and Sigmoidea sp. (marina?) were prevalent on brown leaves from the wrack line. Attempts to assay fungal biovolume in field samples indicated that the sterile mycelium observed after incubation represented the outgrowth of formerly dormant propagules or weakly established microcolonies. It was calculated that fungal biomass could not account for more than 0.5% of leaf mass, and it was probably much smaller than this, for no fungal structures were observed even in concentrated leaf homogenates. Bacterial densities fell within the range reported for other particulate substrates. A speculative estimate of bacterial productivity was 1.4× the standing stock per day. PMID:16345773

  12. Inhibitory Activity of Avicennia marina, a Medicinal Plant in Persian Folk Medicine, against HIV and HSV

    PubMed Central

    Namazi, Rahele; Zabihollahi, Rezvan; Behbahani, Mandana; Rezaei, Abbas

    2013-01-01

    Avicennia marina (Avicenniaceae) is a species of mangrove tree used for treatment of small pox lesions in Persian folk medicine. The antiviral activity of methanol, ethanol, water, chloroform and n-hexane extracts was evaluated against HIV-1 and HSV. Methanol extract had the highest antiviral activity and the most polar fraction of this extract (fraction D) inhibited HSV with TI and SI values of 57.1 and 133; however, it showed mild activity against HIV with SI value of 6.25 (fraction 3). The anti-HSV activity of active fraction was confirmed using FLASH-PCR. Phytochemical investigation revealed that fraction D encompasses flavonoids compounds. The time-of-addition study demonstrated that fraction D disturbs viral replication after penetrating to the cell. A. marina was endowed with fragments by which found to be able to inhibit replication of HSV after entry but did not show significant potency against HIV-1. This promotes further investigation in anti-HSV drug discovery. PMID:24250619

  13. Microplastics are taken up by mussels (Mytilus edulis) and lugworms (Arenicola marina) living in natural habitats.

    PubMed

    Van Cauwenberghe, Lisbeth; Claessens, Michiel; Vandegehuchte, Michiel B; Janssen, Colin R

    2015-04-01

    We studied the uptake of microplastics under field conditions. At six locations along the French-Belgian-Dutch coastline we collected two species of marine invertebrates representing different feeding strategies: the blue mussel Mytilus edulis (filter feeder) and the lugworm Arenicola marina (deposit feeder). Additional laboratory experiments were performed to assess possible (adverse) effects of ingestion and translocation of microplastics on the energy metabolism (cellular energy allocation) of these species. Microplastics were present in all organisms collected in the field: on average 0.2 ± 0.3 microplastics g(-1) (M. edulis) and 1.2 ± 2.8 particles g(-1) (A. marina). In a proof of principle laboratory experiment, mussels and lugworms exposed to high concentrations of polystyrene microspheres (110 particles mL(-1) seawater and 110 particles g(-1) sediment, respectively) showed no significant adverse effect on the organisms' overall energy budget. The results are discussed in the context of possible risks as a result of the possible transfer of adsorbed contaminants. PMID:25617854

  14. Endotoxin Structures in the Psychrophiles Psychromonas marina and Psychrobacter cryohalolentis Contain Distinctive Acyl Features

    PubMed Central

    Sweet, Charles R.; Alpuche, Giancarlo M.; Landis, Corinne A.; Sandman, Benjamin C.

    2014-01-01

    Lipid A is the essential component of endotoxin (Gram-negative lipopolysaccharide), a potent immunostimulatory compound. As the outer surface of the outer membrane, the details of lipid A structure are crucial not only to bacterial pathogenesis but also to membrane integrity. This work characterizes the structure of lipid A in two psychrophiles, Psychromonas marina and Psychrobacter cryohalolentis, and also two mesophiles to which they are related using MALDI-TOF MS and fatty acid methyl ester (FAME) GC-MS. P. marina lipid A is strikingly similar to that of Escherichia coli in organization and total acyl size, but incorporates an unusual doubly unsaturated tetradecadienoyl acyl residue. P. cryohalolentis also shows structural organization similar to a closely related mesophile, Acinetobacter baumannii, however it has generally shorter acyl constituents and shows many acyl variants differing by single methylene (-CH2-) units, a characteristic it shares with the one previously reported psychrotolerant lipid A structure. This work is the first detailed structural characterization of lipid A from an obligate psychrophile and the second from a psychrotolerant species. It reveals distinctive structural features of psychrophilic lipid A in comparison to that of related mesophiles which suggest constitutive adaptations to maintain outer membrane fluidity in cold environments. PMID:25010385

  15. Radiocarbon isotopic evidence for assimilation of atmospheric CO2 by the seagrass Zostera marina

    NASA Astrophysics Data System (ADS)

    Watanabe, K.; Kuwae, T.

    2015-10-01

    Submerged aquatic vegetation takes up water-column dissolved inorganic carbon (DIC) as a carbon source across its thin cuticle layer. It is expected that marine macrophytes also use atmospheric CO2 when exposed to air during low tide, although assimilation of atmospheric CO2 has never been quantitatively evaluated. Using the radiocarbon isotopic signatures (Δ14C) of the seagrass Zostera marina, DIC and particulate organic carbon (POC), we show quantitatively that Z. marina takes up and assimilates atmospheric modern CO2 in a shallow coastal ecosystem. The Δ14C values of the seagrass (-40 to -10 ‰) were significantly higher than those of aquatic DIC (-46 to -18 ‰), indicating that the seagrass uses a 14C-rich carbon source (atmospheric CO2, +17 ‰). A carbon-source mixing model indicated that the seagrass assimilated 0-40 % (mean, 17 %) of its inorganic carbon as atmospheric CO2. CO2 exchange between the air and the seagrass might be enhanced by the presence of a very thin film of water over the air-exposed leaves during low tide. Our radiocarbon isotope analysis, showing assimilation of atmospheric modern CO2 as an inorganic carbon source, improves our understanding of the role of seagrass meadows in coastal carbon dynamics.

  16. Aurantiacicella marina gen. nov., sp. nov., a myxol-producing bacterium from surface seawater.

    PubMed

    Teramoto, Maki; Onodera, Ken-Ichi; Moriyama, Hironori; Komatsu, Ayumi; Akakabe, Mai; Nishijima, Miyuki

    2016-01-01

    A Gram-stain-negative, non-motile, mesophilic, aerobic, rod-shaped bacterium, strain 2A-8T, was isolated from surface seawater at Muroto city, Kochi prefecture, Japan. The strain produced myxol as a major carotenoid. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain fell within the family Flavobacteriaceae and was related most closely to the genus Aquimarina (91.0-94.4 % 16S rRNA gene sequence similarity to the type strains of species of this genus). The DNA G+C content was 35 mol%. The major fatty acids were iso-C15 : 0 and iso-C17 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, an unidentified aminolipid and five unidentified lipids. Menaquinone 6 was detected as the sole isoprenoid quinone. On the basis of phenotypic, genotypic and chemotaxonomic data, strain 2A-8T represents a novel genus and species, for which the name Aurantiacicella marina gen. nov., sp. nov. is proposed. The type strain of Aurantiacicella marina is 2A-8T ( = NBRC 111187T = KCTC 42676T). PMID:26493321

  17. A biliverdin-binding cyanobacteriochrome from the chlorophyll d–bearing cyanobacterium Acaryochloris marina

    PubMed Central

    Narikawa, Rei; Nakajima, Takahiro; Aono, Yuki; Fushimi, Keiji; Enomoto, Gen; Ni-Ni-Win; Itoh, Shigeru; Sato, Moritoshi; Ikeuchi, Masahiko

    2015-01-01

    Cyanobacteriochromes (CBCRs) are linear tetrapyrrole-binding photoreceptors in cyanobacteria that absorb visible and near-ultraviolet light. CBCRs are divided into two types based on the type of chromophore they contain: phycocyanobilin (PCB) or phycoviolobilin (PVB). PCB-binding CBCRs reversibly photoconvert at relatively long wavelengths, i.e., the blue-to-red region, whereas PVB-binding CBCRs reversibly photoconvert at shorter wavelengths, i.e., the near-ultraviolet to green region. Notably, prior to this report, CBCRs containing biliverdin (BV), which absorbs at longer wavelengths than do PCB and PVB, have not been found. Herein, we report that the typical red/green CBCR AM1_1557 from the chlorophyll d–bearing cyanobacterium Acaryochloris marina can bind BV almost comparable to PCB. This BV-bound holoprotein reversibly photoconverts between a far red light–absorbing form (Pfr, λmax = 697 nm) and an orange light–absorbing form (Po, λmax = 622 nm). At room temperature, Pfr fluoresces with a maximum at 730 nm. These spectral features are red-shifted by 48~77 nm compared with those of the PCB-bound domain. Because the absorbance of chlorophyll d is red-shifted compared with that of chlorophyll a, the BV-bound AM1_1557 may be a physiologically relevant feature of A. marina and is potentially useful as an optogenetic switch and/or fluorescence imager. PMID:25609645

  18. Rhizodegradation potential and tolerance of Avicennia marina (Forsk.) Vierh in phenanthrene and pyrene contaminated sediments.

    PubMed

    Jia, Hui; Wang, He; Lu, Haoliang; Jiang, Shan; Dai, Minyue; Liu, Jingchun; Yan, Chongling

    2016-09-15

    A pot experiment was conducted to investigate the dissipation of phenanthrene and pyrene in spiked sediments with presence of Avicennia marina (Forsk.) Vierh. The rhizosphere environment was set up using a self-design nylon rhizo-bag which divided the sediment into the rhizosphere and non-rhizosphere. Results showed that the dissipation of phenanthrene and pyrene were significantly enhanced in the rhizosphere compared with non-rhizosphere sediments. Plant roots promoted dissipation significantly greater than the contribution of direct plant uptake and accumulation of phenanthrene and pyrene. The activities of antioxidant and detoxification enzymes in roots and leaves significantly increased against oxidative stress with increasing PAH concentrations. Furthermore, a significant relationship (R(2)>0.91) between dissolved organic carbon (DOC) concentrations and the residual of PAHs in rhizosphere and non-rhizosphere sediments was observed after 120days planting. Results indicated that rhizome mediation with A. marina is a useful approach to promote the depletion of PAHs in contaminated mangrove sediments. PMID:27373941

  19. Glycolipid biosynthesis in cyanobacteria. [Anabaena variabilis; Chlorogloeopsis sp. ; Schizothrix calcicola; Anacystis nidulans; Anacystis marina

    SciTech Connect

    Van Dusen, W.J.; Jaworski, J.G.

    1987-05-01

    The biosynthesis of monogalactosyldiacyl-glycerol (MGDG) was studied in five different cyanobacteria. Previous work has shown Anabaena variabilis to synthesize both MGDG and monoglucosyl-diacylglycerol (MG1cDG) with MG1cDG being the precursor of MGDG. They have examined four other cyanobacteria to determine if a similar relationship exists. The cyanobacteria studied were Anabaena variabilis, Chlorogloeopsis sp., Schizothrix calcicola, Anacystis nidulans, and Anacystis marina. Each were grown in liquid culture and lipids were labeled with /sup 14/C)CO/sub 2/ for 20 min., 1.0 hr, 1.0 hr + 10 hr chase. Glycolipids were analyzed by initial separation of MGDG and MG1cDG by TLC followed by further analysis by HPLC. Complete separation of molecular species was obtained isocratically on an ODS column. All of the cyanobacteria labeled 16-C and 18-C fatty acids except for A. marina which labeled only 14-C and 16-C fatty acids. Desaturation of the fatty acids could be observed in the 1.0 hr and chase experiments. All were capable of labeling both MG1cDG and MGDG with the precursor-product relationship being observed. There does not appear to be a direct relationship between the epimerization of the sugar moiety and fatty acid desaturation.

  20. Impact of tail-nipping on mortality, growth and reproduction of Arenicola marina

    NASA Astrophysics Data System (ADS)

    Bergman, Magda J. N.; Van Der Veer, Henk W.; Karczmarski, Leszek

    The impact of predation by amputation of regenerating body parts (tail tips) of the lugworm Arenicola marina on species mortality, growth and reproduction has been studied under laboratory conditions by the artificial removal of tail tips at different frequencies. The loss of body weight by amputation was not compensated for by an increased growth. Within a wide range of amputation frequencies, total growth (body growth + amount of tail tip amputated) and reproduction of the lugworm were not affected. Also, both egg development and amount of energy stored in reproduction remained the same. Only at the highest frequency of amputation (once a week) did total growth decrease in the course of time, resulting even in a loss of body weight. The amount of energy stored in reproduction was also significantly less at the highest rate of amputation. Lugworms appeared to be unable to sustain this high level of amputation and the anaerobic sediment conditions in the cuvettes suggest a reduced pumping activity and food intake. Mortality in this group was also higher than in the other groups. The consequences of tail-nipping by flatfish for A. marina in the field situation are discussed.

  1. Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species

    PubMed Central

    Franssen, Susanne U.; Gu, Jenny; Bergmann, Nina; Winters, Gidon; Klostermeier, Ulrich C.; Rosenstiel, Philip; Bornberg-Bauer, Erich; Reusch, Thorsten B. H.

    2011-01-01

    Large-scale transcription profiling via direct cDNA sequencing provides important insights as to how foundation species cope with increasing climatic extremes predicted under global warming. Species distributed along a thermal cline, such as the ecologically important seagrass Zostera marina, provide an opportunity to assess temperature effects on gene expression as a function of their long-term adaptation to heat stress. We exposed a southern and northern European population of Zostera marina from contrasting thermal environments to a realistic heat wave in a common-stress garden. In a fully crossed experiment, eight cDNA libraries, each comprising ∼125 000 reads, were obtained during and after a simulated heat wave, along with nonstressed control treatments. Although gene-expression patterns during stress were similar in both populations and were dominated by classical heat-shock proteins, transcription profiles diverged after the heat wave. Gene-expression patterns in southern genotypes returned to control values immediately, but genotypes from the northern site failed to recover and revealed the induction of genes involved in protein degradation, indicating failed metabolic compensation to high sea-surface temperature. We conclude that the return of gene-expression patterns during recovery provides critical information on thermal adaptation in aquatic habitats under climatic stress. As a unifying concept for ecological genomics, we propose transcriptomic resilience, analogous to ecological resilience, as an important measure to predict the tolerance of individuals and hence the fate of local populations in the face of global warming. PMID:22084086

  2. Understanding the Ecoydrology of Mangroves: A Simple SPAC Model for Avicennia Marina

    NASA Astrophysics Data System (ADS)

    Perri, Saverio; Viola, Francesco; Valerio Noto, Leonardo; Molini, Annalisa

    2015-04-01

    Mangroves represent one of the most carbon-rich ecosystems in the Tropics, noticeably impacting ecosystem services and the economy of these regions. Whether the ability of mangroves to exclude and tolerate salt has been extensively investigated in the literature - both from the structural and functional point of view - their eco-hydrological characteristics remains largely understudied, despite the crucial link with productivity, efficient carbon storage and fluxes. In this contribution we develop a "first-order" Soil Plant Atmosphere Continuum model for Avicennia Marina, a mangrove able to adapt to hyper-arid intertidal zones and characterized by complex morphological and eco-physiological traits. Among mangroves, Avicennia marina is one of the most tolerant to salinity and arid climatic conditions. Our model, based on a simple macroscopic approach, takes into account the specific characteristics of the mangrove ecosystem and in particular, the salinity of the water in the soil and the levels of salt stress to which the plant may be subjected. Mangrove transpiration is hence obtained by solving the plant and leaf water balance and the leaf energy balance, taking explicitly into account the role of osmotic water potential and salinity in governing plant resistance to water fluxes. The SPAC model of Avicennia is hence tested against experimental data obtained from the literature, showing the reliability and effectiveness of this minimalist model in reproducing observed transpiration fluxes. Finally, sensitivity analysis is used to assess whether uncertainty on the adopted parameters could lead to significant errors in the transpiration assessment.

  3. A biliverdin-binding cyanobacteriochrome from the chlorophyll d-bearing cyanobacterium Acaryochloris marina.

    PubMed

    Narikawa, Rei; Nakajima, Takahiro; Aono, Yuki; Fushimi, Keiji; Enomoto, Gen; Ni-Ni-Win; Itoh, Shigeru; Sato, Moritoshi; Ikeuchi, Masahiko

    2015-01-01

    Cyanobacteriochromes (CBCRs) are linear tetrapyrrole-binding photoreceptors in cyanobacteria that absorb visible and near-ultraviolet light. CBCRs are divided into two types based on the type of chromophore they contain: phycocyanobilin (PCB) or phycoviolobilin (PVB). PCB-binding CBCRs reversibly photoconvert at relatively long wavelengths, i.e., the blue-to-red region, whereas PVB-binding CBCRs reversibly photoconvert at shorter wavelengths, i.e., the near-ultraviolet to green region. Notably, prior to this report, CBCRs containing biliverdin (BV), which absorbs at longer wavelengths than do PCB and PVB, have not been found. Herein, we report that the typical red/green CBCR AM1_1557 from the chlorophyll d-bearing cyanobacterium Acaryochloris marina can bind BV almost comparable to PCB. This BV-bound holoprotein reversibly photoconverts between a far red light-absorbing form (Pfr, λmax = 697 nm) and an orange light-absorbing form (Po, λmax = 622 nm). At room temperature, Pfr fluoresces with a maximum at 730 nm. These spectral features are red-shifted by 48~77 nm compared with those of the PCB-bound domain. Because the absorbance of chlorophyll d is red-shifted compared with that of chlorophyll a, the BV-bound AM1_1557 may be a physiologically relevant feature of A. marina and is potentially useful as an optogenetic switch and/or fluorescence imager. PMID:25609645

  4. Zostera marina (eelgrass) growth and survival along a gradient ofnutrients and turbidity in the lower Chesapeake Bay

    USGS Publications Warehouse

    Moore, K.A.; Neckles, H.A.; Orth, R.J.

    1996-01-01

    Survival of transplanted Zostera marina L. (eelgrass), Z. marina growth,and environmental conditions were studied concurrently at a number of sitesin a southwestern tributary of the Chesapeake Bay to elucidate the factorslimiting macrophyte distribution in this region. Consistent differences insurvival of the transplants were observed, with no long-term survival at anyof the sites that were formerly vegetated with this species but thatcurrently remain unvegetated. Therefore, the current distribution of Z.marina likely represents the extent of suitable environmental conditions inthe region, and the lack of recovery into historically vegetated sites is notsolely due to lack of propagules. Poor long-term survival was related toseasonally high levels of water column light attenuation. Fall transplantsdied by the end of summer following exposure to levels of high springturbidity (K(d) > 3.0). Accumulation of an epiphyte matrix during the latespring (0.36 to 1.14 g g-1 dry wt) may also have contributed to thisstress. Differences in water column nutrient levels among sites during thefall and winter (10 to 15 ??M dissolved inorganic nitrogen and 1 ??Mdissolved inorganic phosphates) had no observable effect on epiphyteaccumulation or macrophyte growth. Salinity effects were minor and there wereno symptoms of disease. Although summertime conditions resulted indepressions in growth, they did not alone limit long-term survival. It issuggested that water quality conditions enhancing adequate seagrass growthduring the spring may be key to long-term Z. marina survival and successfulrecolonization in this region.

  5. A tale of two seagrasses: Comparing the science and management of Zostera marina and Zostera japonica in the Pacific Northwest

    EPA Science Inventory

    On the Pacific coast of North America, at least two congeners of Zostera occur: native Zostera marina, and introduced, Z. japonica. Z. japonica is considered “invasive” and therefore, ecologically and economically harmful by some, while others consider it benign or perhaps benef...

  6. APPARENT LACK OF VESICULAR-ARBUSCULAR MYCORRHIZA (VAM) IN SEAGRASSES ZOSTERA MARINA L. AND THALASSIA TESTUDIUM BANKS EX KONIG

    EPA Science Inventory

    We examined two populations of Zostera marina L. and one of Thalassia testudinum Banks ex Konig for presence of vesicular-arbuscular mycorrhiza (VAM). None of these plants showed any VAM colonization. In addition, we were unable to find any literature references on the presence o...

  7. An effective seed protection method for planting Zostera marina (eelgrass) seeds: Implications for their large-scale restoration.

    PubMed

    Zhang, Pei-Dong; Fang, Chao; Liu, Jie; Xu, Qiang; Li, Wen-Tao; Liu, Yan-Shan

    2015-06-15

    We describe an innovative method of planting Zostera marina (eelgrass) seeds in which hessian bags filled with high-silted sediments are used as a seed protecting device. Here, we evaluated the effectiveness of the method through a field seed-sowing experiment over a three year period. The suitable seed planting density required by the seeds of Z. marina in this method was also investigated. In the spring following seed distribution, seedling establishment rate of Z. marina subjected to different seed densities of 200-500seedsbag(-1) ranged from 16% to 26%. New eelgrass patches from seed were fully developed and well maintained after 2-3years following distribution. The seed planting density of 400seedsbag(-1) may be the most suitable for the establishment of new eelgrass patches. Our results demonstrate that seed-based restoration can be an effective restoration tool and the technique presented should be considered for future large-scale Z. marina restoration projects. PMID:25912265

  8. WATER QUALITY AT FIVE MARINAS IN LAKE TEXOMA AS RELATED TO METHYL TERT-BUTYL ETHER (MTBE)

    EPA Science Inventory

    Occurrence of methyl tert-butyl ether (MTBE) in five marinas was monitored between June 1999 and November 2000 in Lake Texoma located on the border of Oklahoma and Texas. MTBE is a commonly used gasoline additive and a suspected carcinogen. Lake water was collected at locations i...

  9. Mobilization, adsorption, and bioavailability of Pt and Pd in coastal sediments: the role of the polychaete, Arenicola marina.

    PubMed

    French, Ben; Turner, Andrew

    2008-05-15

    The biogeochemical behavior of Pt and Pd in coastal sediments has been examined in a series of microcosms, both in the presence and absence of the deposit-feeding invertebrate, Arenicola marina. When metals were introduced to the overlying water column as solutes from acidified standards, A. marina dramatically enhanced their sorption to sediment throughout the core depth (14 cm) compared with an unfaunated control by exposing a greater surface area of particles to more rapidly ventilating contaminated water. After a 10 day incubation period, the assimilation efficiency (AE) by A. marina was about 10% for Pt and 1% for Pd. Calculations based on either partition constants or operational measures of metal bioaccessibility in sediment (using the protein, BSA) suggested that both aqueous and dietary sources of metal were important When Pt and Pd were introduced to the sediment-water interface as components of ground catalytic converter particles, significant subduction was effected by A. marina, and metals were solubilized to a greater extent than in an unfaunated control. AE in these experiments was < 0.1% for Pt and about 1% for Pd, and the most important vector for assimilation appeared to be from the aqueous phase via partial solubilization of metal from catalytic material. The findings of this study improve our understanding of the availability, cycling, and fate of Pt and Pd in contaminated estuaries and coastal waters. PMID:18546687

  10. Fine-scale spatial distribution of the common lugworm Arenicola marina, and effects of intertidal clam fishing

    NASA Astrophysics Data System (ADS)

    Boldina, Inna; Beninger, Peter G.

    2014-04-01

    Despite its ubiquity and its role as an ecosystem engineer on temperate intertidal mudflats, little is known of the spatial ecology of the lugworm Arenicola marina. We estimated lugworm densities and analyzed the spatial distribution of A. marina on a French Atlantic mudflat subjected to long-term clam digging activities, and compared these to a nearby pristine reference mudflat, using a combination of geostatistical techniques: point-pattern analysis, autocorrelation, and wavelet analysis. Lugworm densities were an order of magnitude greater at the reference site. Although A. marina showed an aggregative spatial distribution at both sites, the characteristics and intensity of aggregation differed markedly between sites. The reference site showed an inhibition process (regular distribution) at distances <7.5 cm, whereas the impacted site showed a random distribution at this scale. At distances from 15 cm to several tens of meters, the spatial distribution of A. marina was clearly aggregated at both sites; however, the autocorrelation strength was much weaker at the impacted site. In addition, the non-impacted site presented multi-scale spatial distribution, which was not evident at the impacted site. The differences observed between the spatial distributions of the fishing-impacted vs. the non-impacted site reflect similar findings for other components of these two mudflat ecosystems, suggesting common community-level responses to prolonged mechanical perturbation: a decrease in naturally-occurring aggregation. This change may have consequences for basic biological characteristics such as reproduction, recruitment, growth, and feeding.

  11. EFFECTS OF RECREATIONAL CLAM HARVESTING ON EELGRASS (ZOSTERA MARINA) AND ASSOCIATED INFAUNAL INVERTEBRATES: IN SITU MANIPULATIVE EXPERIMENTS

    EPA Science Inventory

    The effect of recreational clam harvesting on eelgrass (Zostera marina) was experimentally tested by raking or digging for clams in experimental 1-m2 plots located in a Yaquina Bay (Newport, OR) eelgrass meadow. After three monthly treatments, eelgrass measures of biomass, prima...

  12. Assessment of biotic response to heavy metal contamination in Avicennia marina mangrove ecosystems in Sydney Estuary, Australia.

    PubMed

    Nath, Bibhash; Chaudhuri, Punarbasu; Birch, Gavin

    2014-09-01

    Mangrove forests act as a natural filter of land-derived wastewaters along industrialized tropical and sub-tropical coastlines and assist in maintaining a healthy living condition for marine ecosystems. Currently, these intertidal communities are under serious threat from heavy metal contamination induced by human activity associated with rapid urbanization and industrialization. Studies on the biotic responses of these plants to heavy metal contamination are of great significance in estuary management and maintaining coastal ecosystem health. The main objective of the present investigation was to assess the biotic response in Avicennia marina ecosystems to heavy metal contamination through the determination of metal concentrations in leaves, fine nutritive roots and underlying sediments collected in fifteen locations across Sydney Estuary (Australia). Metal concentrations (especially Cu, Pb and Zn) in the underlying sediments of A. marina were enriched to a level (based on Interim Sediment Quality Guidelines) at which adverse biological effects to flora could occasionally occur. Metals accumulated in fine nutritive roots greater than underlying sediments, however, only minor translocation of these metals to A. marina leaves was observed (mean translocation factors, TFs, for all elements <0.13, except for Mn). Translocation factors of essential elements (i.e., common plant micro-nutrients, Cu, Ni, Mn and Zn) were greater than non-essential elements (As, Cd, Co, Cr and Pb), suggesting that A. marina mangroves of this estuary selectively excluded non-essential elements, while regulating essential elements and limiting toxicity to plants. This study supports the notion that A. marina mangroves act as a phytostabilizer in this highly modified estuary thereby protecting the aquatic ecosystem from point or non-point sources of heavy metal contamination. PMID:25011126

  13. Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types.

    PubMed

    Franssen, Susanne U; Gu, Jenny; Winters, Gidon; Huylmans, Ann-Kathrin; Wienpahl, Isabell; Sparwel, Maximiliane; Coyer, James A; Olsen, Jeanine L; Reusch, Thorsten B H; Bornberg-Bauer, Erich

    2014-06-01

    Genome-wide transcription analysis between related species occurring in overlapping ranges can provide insights into the molecular basis underlying different ecological niches. The co-occurring seagrass species, Zostera marina and Nanozostera noltii, are found in marine coastal environments throughout the northern hemisphere. Z. marina is often dominant in subtidal environments and subjected to fewer temperature extremes compared to the predominately intertidal and more stress-tolerant N. noltii. We exposed plants of both species to a realistic heat wave scenario in a common-stress-garden experiment. Using RNA-seq (~7million reads/library), four Z. marina and four N. noltii libraries were compared representing northern (Denmark) and southern (Italy) locations within the co-occurring range of the species' European distribution. A total of 8977 expressed genes were identified, of which 78 were directly related to heat stress. As predicted, both species were negatively affected by the heat wave, but showed markedly different molecular responses. In Z. marina the heat response was similar across locations in response to the heatwave at 26°C, with a complex response in functions related to protein folding, synthesis of ribosomal chloroplast proteins, proteins involved in cell wall modification and heat shock proteins (HSPs). In N. noltii the heat response markedly differed between locations, while HSP genes were not induced in either population. Our results suggest that as coastal seawater temperatures increase, Z. marina will disappear along its southern most ranges, whereas N. noltii will continue to move north. As a consequence, sub- and intertidal habitat partitioning may weaken in more northern regions because the higher thermal tolerance of N. noltii provides a competitive advantage in both habitats. Although previous studies have focused on HSPs, the present study clearly demonstrates that a broader examination of stress related genes is necessary. PMID:24703884

  14. Rhizobial strains isolated from nodules of Medicago marina in southwest Spain are abiotic-stress tolerant and symbiotically diverse.

    PubMed

    Alías-Villegas, Cynthia; Cubo, M Teresa; Lara-Dampier, Victoria; Bellogín, Ramón A; Camacho, María; Temprano, Francisco; Espuny, M Rosario

    2015-10-01

    The isolation and characterisation of nitrogen-fixing root nodule bacteria from Medicago marina, a tolerant legume species, were studied in two areas from southwest Spain. A total of 30 out of 82 isolates with distinct ERIC-PCR fingerprints were analysed on the basis of molecular (PCR-RFLP of the 16S-23S rDNA intergenic spacer region (IGS) with two endonucleases, analysis of the 16S rDNA and symbiotic nodC gene sequences, plasmid profiles and SDS-PAGE of LPS, including the partial sequence of the housekeeping gene glnII and the symbiotic gene nodA of some representatives), physiological (utilisation of sole carbon sources, tolerance to antibiotics, NaCl, heavy metals, temperature and pH) and symbiotic parameters (efficacy on M. marina, M. minima, M. murex, M. orbicularis, M. polymorpha, M. sativa and M. truncatula). All the bacteria isolated from M. marina nodules belonged to Ensifer meliloti, except for one strain that belonged to E. medicae. To determine the nodulation range of M. marina, 10 different Ensifer species were tested for their ability to nodulate on this plant. E. kummerowiae CCBAU 71714 and the E. medicae control strain M19.1 were the only Ensifer species tested that developed nitrogen-fixing nodules on this plant. Most of the M. marina-nodulating strains showed tolerance to stress factors and all of them shared the presence of a gene similar to cadA, a gene that encodes for a PIB-type ATPase, which is a transporter belonging to the large superfamily of ATP-driven pumps involved in the transport of metals across cell membranes. PMID:26299372

  15. Mangrove distribution and mosquito control: transport of Avicennia marina propagules by mosquito-control runnels in southeast Queensland saltmarshes

    NASA Astrophysics Data System (ADS)

    Breitfuss, M. J.; Connolly, R. M.; Dale, P. E. R.

    2003-03-01

    The saltmarsh-mangrove interface generally constitutes the landward boundary for the grey mangrove Avicennia marina var. australasica, the most widespread species on southeast Queensland shores. A. marina produces buoyant propagules, which are dispersed by tidal waters, only infrequently transported to saltmarsh by the highest spring tides. We predicted that runnelling, a form of habitat modification for mosquito control, transports and deposits mangrove propagules to saltmarsh because the runnels carry low-amplitude tides that would not normally inundate higher regions of the marsh. To test this, groups of marked A. marina propagules were released at three runnelled saltmarshes in southeast Queensland during high-amplitude, flooding and low-amplitude, non-flooding tidal events. The distance propagules were transported from their original starting positions on the saltmarsh-mangrove interface was measured and analysed to detect differences among groups at different distances from runnels. Groups of propagules released within 10 m of a runnel were always transported significantly further from the starting position and further up the saltmarsh shore after both flooding and non-flooding tides than any other groups. In addition, the pattern of stranding on saltmarsh for significantly different groups was closely associated with the path of runnel construction so that propagules were located either in the runnel or in depressions linked to the runnel that had been isolated mosquito-breeding pools prior to runnelling. Observations of A. marina plants at other runnelled sites suggest that propagules transported by runnels can establish and develop to maturity, at least in depressions and runnels, in saltmarsh. The fact that runnels transport propagules to regions of the saltmarsh beyond their normal limits of dispersion suggests a possible advantage for landward extension of the intertidal distribution of A. marina at runnelled sites and should be considered in saltmarsh

  16. Comparing the performance of species distribution models of Zostera marina: Implications for conservation

    NASA Astrophysics Data System (ADS)

    Valle, Mireia; van Katwijk, Marieke M.; de Jong, Dick J.; Bouma, Tjeerd J.; Schipper, Aafke M.; Chust, Guillem; Benito, Blas M.; Garmendia, Joxe M.; Borja, Ángel

    2013-10-01

    Intertidal seagrasses show high variability in their extent and location, with local extinctions and (re-)colonizations being inherent in their population dynamics. Suitable habitats are identified usually using Species Distribution Models (SDM), based upon the overall distribution of the species; thus, accounting solely for spatial variability. To include temporal effects caused by large interannual variability, we constructed SDMs for different combinations and fusions of yearly distribution data. The main objectives were to: (i) assess the spatio-temporal dynamics of an intertidal seagrass bed of Zostera marina; (ii) select the most accurate SDM techniques to model different temporal distribution data subsets of the species; (iii) assess the relative importance of the environmental variables for each data subset; and (iv) evaluate the accuracy of the models to predict species conservation areas, addressing implications for management. To address these objectives, a time series of 14-year distribution data of Zostera marina in the Ems estuary (The Netherlands) was used to build different data subsets: (1) total presence area; (2) a conservative estimate of the total presence area, defined as the area which had been occupied during at least 4 years; (3) core area, defined as the area which had been occupied during at least 2/3 of the total period; and (4-6) three random selections of monitoring years. On average, colonized and disappeared areas of the species in the Ems estuary showed remarkably similar transition probabilities of 12.7% and 12.9%, respectively. SDMs based upon machine-learning methods (Boosted Regression Trees and Random Forest) outperformed regression-based methods. Current velocity and wave exposure were the most important variables predicting the species presence for widely distributed data. Depth and sea floor slope were relevant to predict conservative presence area and core area. It is concluded that, the fusion of the spatial distribution

  17. Proteomic profile of Ortleppascaris sp.: A helminth parasite of Rhinella marina in the Amazonian region

    PubMed Central

    e Silva, Jefferson Pereira; Furtado, Adriano Penha; dos Santos, Jeannie Nascimento

    2014-01-01

    Ortleppascaris sp. is a helminth that, in its larval stage, infects the liver parenchyma of the amphibian Rhinella marina, resulting in severe physiological and pathological changes. This study used a proteomic approach to determine the overall profile of proteins expressed in a somatic extract from the nematodes to investigate the relationship between the parasite and its host. A total of 60 abundant proteins were selected from the two-dimensional electrophoresis, identified by peptide mass fingerprinting, and grouped based on their Gene Ontology by the biological processes in which they are potentially involved. Important helminthic derivatives, such as the immunoreactive As37 antigen, guanylyl cyclases, proteolytic enzymes, and other proteins conserved among different parasites, were identified through homology. This study represents a new approach to helminth-related proteomic studies using an amphibian animal model. Furthermore, this study identified protein markers that are important to the host–parasite relationship and the viability, development, infectivity, and virulence of helminths. PMID:25161903

  18. Sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China

    NASA Astrophysics Data System (ADS)

    Li, Ruili; Chai, Minwei; Guo, Meixian; Qiu, Guo Yu

    2016-08-01

    To investigate the rate of sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China, sediment cores were analyzed. The results showed that Hg concentrations were much higher at all depths compared to the background level. A high correlation between Hg and total organic carbon (TOC) indicated their similar anthropogenic origin. Sedimentation rate was estimated to be 1.38 cm a-1 by 210Pb geochronology. The increase in the mass sediment accumulation rates was rapid (range: 0.5-0.94 g cm-2 a-1), and the Hg fluxes ranged between 76 and 116 ng cm-2 a-1 during the last three decades. The reduction in both Hg concentrations and flux during the last decade may be due to the adoption of contamination control policies. Our results support the notion that the Hg fluxes determined from the sediment cores reveal the effects of anthropogenic influences from the areas around Deep Bay.

  19. Photovoltaic DER System Could Save USPS $25,000 per Year in Marina del Rey, California

    SciTech Connect

    Not Available

    2002-11-01

    In numerous projects, government agencies are demonstrating the economic and environmental value of using distributed energy resources (DER) to provide reliable electricity for Federal facilities. These projects also show how renewable DER systems such as photovoltaics (PV) can be effectively integrated into utility power grids to provide added power during peak demand periods in populous regions and states. This four-page case study describes a recent project in which the United States Postal Service (USPS) worked with the U.S. Department of Energy (DOE) Federal Energy Management Program (FEMP), a national laboratory, the local utility, and a private company to install a PV DER system at the USPS Marina Processing and Distribution Center in Inglewood, California. This system is expected to shave 10% off the facility's 1.2-megawatt peak power demand and save more $25,000 per year in utility costs.

  20. Characterisation of Major Histocompatibility Complex Class I in the Australian Cane Toad, Rhinella marina

    PubMed Central

    Lillie, Mette; Shine, Richard; Belov, Katherine

    2014-01-01

    The Major Histocompatibility Complex (MHC) class I is a highly variable gene family that encodes cell-surface receptors vital for recognition of intracellular pathogens and initiation of immune responses. The MHC class I has yet to be characterised in bufonid toads (Order: Anura; Suborder: Neobatrachia; Family: Bufonidae), a large and diverse family of anurans. Here we describe the characterisation of a classical MHC class I gene in the Australian cane toad, Rhinella marina. From 25 individuals sampled from the Australian population, we found only 3 alleles at this classical class I locus. We also found large number of class I alpha 1 alleles, implying an expansion of class I loci in this species. The low classical class I genetic diversity is likely the result of repeated bottleneck events, which arose as a result of the cane toad's complex history of introductions as a biocontrol agent and its subsequent invasion across Australia. PMID:25093458

  1. An introduced pentastomid parasite (Raillietiella frenata) infects native cane toads (Rhinella marina) in Panama.

    PubMed

    Kelehear, Crystal; Saltonstall, Kristin; Torchin, Mark E

    2015-04-01

    The pentastomid parasite, Raillietiella frenata, is native to Asia where it infects the Asian House gecko, Hemidactylus frenatus. This gecko has been widely introduced and recently R. frenata was found in introduced populations of cane toads (Rhinella marina) in Australia, indicating a host-switch from introduced geckos to toads. Here we report non-native adult R. frenata infecting the lungs of native cane toads in Panama. Eight of 64 toads were infected (median = 2.5, range = 1-80 pentastomids/toad) and pentastomid prevalence was positively associated with the number of buildings at a site, though further sampling is needed to confirm this pattern. We postulate that this pattern is likely due to a host shift of this parasite from an urban-associated introduced gecko. This is the first record of this parasite infecting cane toads in their native range, and the first instance of this parasite occurring in Central America. PMID:25394910

  2. Exploiting intraspecific competitive mechanisms to control invasive cane toads (Rhinella marina)

    PubMed Central

    Crossland, Michael R.; Haramura, Takashi; Salim, Angela A.; Capon, Robert J.; Shine, Richard

    2012-01-01

    If invasive species use chemical weapons to suppress the viability of conspecifics, we may be able to exploit those species-specific chemical cues for selective control of the invader. Cane toads (Rhinella marina) are spreading through tropical Australia, with negative effects on native species. The tadpoles of cane toads eliminate intraspecific competitors by locating and consuming newly laid eggs. Our laboratory trials show that tadpoles find those eggs by searching for the powerful bufadienolide toxins (especially, bufogenins) that toads use to deter predators. Using those toxins as bait, funnel-traps placed in natural waterbodies achieved near-complete eradication of cane toad tadpoles with minimal collateral damage (because most native (non-target) species are repelled by the toads' toxins). More generally, communication systems that have evolved for intraspecific conflict provide novel opportunities for invasive-species control. PMID:22696528

  3. Cerium Binding Activity of Pectins Isolated from the Seagrasses Zostera marina and Phyllospadix iwatensis

    PubMed Central

    Khotimchenko, Yuri; Khozhaenko, Elena; Kovalev, Valeri; Khotimchenko, Maxim

    2012-01-01

    Cerium binding activity of three different water soluble pectin compounds of different origin was studied in a batch sorption system. The Langmuir, Freundlich and BET sorption models were adopted to describe the binding reactions between metal ions and pectin molecules. The Langmuir model provided the best fit. Within the pH range from 4.0 to 6.0, the largest amount of the cerium ions was bound by pectin isolated from the seagrass Phylospadix iwatensis in comparison to pectin extracted from the seagrass Zostera marina and pectin obtained from citrus peel (commercial grade). The Langmuir constants were also highest for the pectin samples isolated from the seagrass P. iwatensis. The results obtained from this study suggest that pectin is a prospective source for the development of radioisotope-removing pharmaceuticals. PMID:22690146

  4. Experimental assessment of critical anthropogenic sediment burial in eelgrass Zostera marina.

    PubMed

    Munkes, Britta; Schubert, Philipp R; Karez, Rolf; Reusch, Thorsten B H

    2015-11-15

    Seagrass meadows, one of the world's most important and productive coastal habitats, are threatened by a range of anthropogenic actions. Burial of seagrass plants due to coastal activities is one important anthropogenic pressure leading to the decline of local populations. In our study, we assessed the response of eelgrass Zostera marina to sediment burial from physiological, morphological, and population parameters. In a full factorial field experiment, burial level (5-20cm) and burial duration (4-16weeks) were manipulated. Negative effects were visible even at the lowest burial level (5cm) and shortest duration (4weeks), with increasing effects over time and burial level. Buried seagrasses showed higher shoot mortality, delayed growth and flowering and lower carbohydrate storage. The observed effects will likely have an impact on next year's survival of buried plants. Our results have implications for the management of this important coastal plant. PMID:26388446

  5. Cerium binding activity of pectins isolated from the seagrasses Zostera marina and Phyllospadix iwatensis.

    PubMed

    Khotimchenko, Yuri; Khozhaenko, Elena; Kovalev, Valeri; Khotimchenko, Maxim

    2012-04-01

    Cerium binding activity of three different water soluble pectin compounds of different origin was studied in a batch sorption system. The Langmuir, Freundlich and BET sorption models were adopted to describe the binding reactions between metal ions and pectin molecules. The Langmuir model provided the best fit. Within the pH range from 4.0 to 6.0, the largest amount of the cerium ions was bound by pectin isolated from the seagrass Phylospadix iwatensis in comparison to pectin extracted from the seagrass Zostera marina and pectin obtained from citrus peel (commercial grade). The Langmuir constants were also highest for the pectin samples isolated from the seagrass P. iwatensis. The results obtained from this study suggest that pectin is a prospective source for the development of radioisotope-removing pharmaceuticals. PMID:22690146

  6. Kocuria marina BS-15 a biosurfactant producing halophilic bacteria isolated from solar salt works in India

    PubMed Central

    Sarafin, Yesurethinam; Donio, Mariathasan Birdilla Selva; Velmurugan, Subramanian; Michaelbabu, Mariavincent; Citarasu, Thavasimuthu

    2014-01-01

    Biosurfactant screening was made among the eight halophilic bacterial genera isolated from Kovalam solar salt works in Kanyakumari of India. After initial screening, Kocuria sp. (Km), Kurthia sp. (Ku) and Halococcus sp. (Hc) were found to have positive biosurfactant activity. Biosurfactant derived from Kocuria sp. emulsified more than 50% of the crude oil, coconut oil, sunflower oil, olive oil and kerosene when compared to the other strains. Further, Kocuria marina BS-15 derived biosurfactant was purified and characterized by TLC, FTIR and GC–MS analysis. The TLC analysis revealed that, the purified biosurfactants belong to the lipopeptide group. The IR spectrum results revealed that functional groups are R2C 000000000000 000000000000 000000000000 111111111111 000000000000 111111111111 000000000000 000000000000 000000000000 NN, alkenes and N–H. The GC–MS analysis confirmed the compound as Nonanoic acid and Cyclopropane with the retention time of 12.78 and 24.65, respectively. PMID:25473358

  7. Digestive proteases of the lugworm (Arenicola marina) inhibited by Cu from contaminated sediments

    SciTech Connect

    Chen, Z.; Mayer, L.M.

    1998-03-01

    The authors examined potential toxic effects of copper released from contaminated sediments during deposit feeding of the lugworm, Arenicola marina. Titration of Cu solution into gut fluids can result in decreases in protease activity if sufficient Cu is added. The effects of Cu on gut proteases were confirmed by incubation of gut fluids with Cu-contaminated harbor sediments. Monitoring of Cu titration into gut fluids shows that enzyme inhibition and quenching of gut protein fluorescence occur only when sufficient Cu has been added to allow inorganic Cu species to become abundant. This threshold level probably represents the exhaustion of strong binding sites that act as protection against enzyme inhibition. Thus, sediments contaminated with Cu may have inhibitory effects on digestive processes in lugworms.

  8. Distribution and characteristics of marine litter on the Marina beach, Chennai, India

    NASA Astrophysics Data System (ADS)

    Dhanapal, R.

    2013-05-01

    The types, quantities, and distribution of marine litter found on the beach of the Marina, Chennai, India were surveyed during 2010-2011 season wise. Litter items were sorted into material and usage categories. The counts and weights of the litter were counted and measured. The plastic-type litter (63.4 kg) is the most dominant material category followed by polythene (10.6 kg), metal (5.3 kg) and glass (15.2 kg). Cloth (66.0 kg) is the dominant usage category followed by rubber (45.7 kg) and wood (70.0 kg). Based on the typological results three dominant litter sources were identified viz., land-based, vessel-based and fishery-based sources. t test help recognize dominant litter sources.t; t;

  9. Benthic assemblages, biodiversity and invasiveness in marinas and commercial harbours: an investigation using a bioindicator group.

    PubMed

    Megina, Cesar; González-Duarte, Manuel M; López-González, Pablo J

    2016-01-01

    Fouling communities on artificial marine structures are generally different from benthic communities in natural rocky habitats. However, they may also differ among different types of artificial structures. Two artificial structures in direct contact with arriving vessels were compared: floating pontoons within recreational marinas, and sea-walls within commercial harbours. Natural rocky habitats were used as a reference, and the genus Eudendrium (Cnidaria, Hydrozoa) was chosen as a bioindicator. The assemblages were different among the three types of habitat studied, with different species characterising each habitat. The probability of finding an invasive Eudendrium species was significantly higher on pontoons. Diversity was the lowest on pontoons, but it was not significantly different between sea-walls and natural rocks. In general, a barrier to the spread of exotic species exists between harbours and natural rocky habitats. Floating pontoons seem to be a less suitable habitat for native fauna and a key element in marine biological invasions. PMID:26960078

  10. Exploiting intraspecific competitive mechanisms to control invasive cane toads (Rhinella marina).

    PubMed

    Crossland, Michael R; Haramura, Takashi; Salim, Angela A; Capon, Robert J; Shine, Richard

    2012-09-01

    If invasive species use chemical weapons to suppress the viability of conspecifics, we may be able to exploit those species-specific chemical cues for selective control of the invader. Cane toads (Rhinella marina) are spreading through tropical Australia, with negative effects on native species. The tadpoles of cane toads eliminate intraspecific competitors by locating and consuming newly laid eggs. Our laboratory trials show that tadpoles find those eggs by searching for the powerful bufadienolide toxins (especially, bufogenins) that toads use to deter predators. Using those toxins as bait, funnel-traps placed in natural waterbodies achieved near-complete eradication of cane toad tadpoles with minimal collateral damage (because most native (non-target) species are repelled by the toads' toxins). More generally, communication systems that have evolved for intraspecific conflict provide novel opportunities for invasive-species control. PMID:22696528

  11. Supramolecular organization of phycobiliproteins in the chlorophyll d-containing cyanobacterium Acaryochloris marina.

    PubMed

    Chen, Min; Floetenmeyer, Matthias; Bibby, Thomas S

    2009-08-01

    Here we report the high-resolution detail of the organization of phycobiliprotein structures associated with photosynthetic membranes of the chlorophyll d-containing cyanobacterium Acaryochloris marina. Cryo-electron transmission-microscopy on native cell sections show extensive patches of near-crystalline phycobiliprotein rods that are associated with the stromal side of photosynthetic membranes. This supramolecular photosynthetic structure represents a novel mechanism of organizing the photosynthetic light-harvesting machinery. In addition, the specific location of phycobiliprotein patches suggests a physical separation of photosystem I and photosystem II reaction centres. Based on this finding and the known photosystem's structure in Acaryochloris, we discuss possible membrane arrangements of photosynthetic membrane complexes in this species. PMID:19596002

  12. Release and Consumption of DMSP from Emiliania Huxleyi during grazing by Oxyrrhis Marina

    NASA Technical Reports Server (NTRS)

    Wolfe, Gordon V.; Sherr, Evelyn B.; Sherr, Barry F.

    1994-01-01

    Degradation and release to solution of intracellular dimethylsulfoniopropionate (DMSP) from Emiliania huxleyi 370 was observed during grazing by the heterotrophic dinoflagellate Oxyrrhis marina in 24 h bottle incubations. Between 30 and 70% of the lost algal DMSP was metabolized by the grazers without production of dimethylsulfide (DMS) when grazer densities were 150 to 450/ml. The rest was released to solution and about 30% was converted to DMS by bacteria associated with the grazer culture. These experiments demonstrate that grazing by herbivorous protists may be an important sink for DMSP in marine waters, removing a potential source of DMS. Microzooplankton grazing may also indirectly increase the production of DMS by transferring algal DMSP to the dissolved pool, making it available for bacterial metabolism.

  13. Kinetics of phyllosemiquinone oxidation in the Photosystem I reaction centre of Acaryochloris marina.

    PubMed

    Santabarbara, Stefano; Bailleul, Benjamin; Redding, Kevin; Barber, James; Rappaport, Fabrice; Telfer, Alison

    2012-02-01

    Light-induced electron transfer reactions in the chlorophyll a/d-binding Photosystem I reaction centre of Acaryochloris marina were investigated in whole cells by pump-probe optical spectroscopy with a temporal resolution of ~5ns at room temperature. It is shown that phyllosemiquinone, the secondary electron transfer acceptor anion, is oxidised with bi-phasic kinetics characterised by lifetimes of 88±6ns and 345±10ns. These lifetimes, particularly the former, are significantly slower than those reported for chlorophyll a-binding Photosystem I, which typically range in the 5-30ns and 200-300ns intervals. The possible mechanism of electron transfer reactions in the chlorophyll a/d-binding Photosystem I and the slower oxidation kinetics of the secondary acceptors are discussed. PMID:22037394

  14. DESICCATION INDEX: A MEASURE OF DAMAGE CAUSED BY ADVERSE AERIAL EXPOSURE ON INTERTIDAL EELGRASS (ZOSTERA MARINA) IN AN OREGON (USA) ESTUARY

    EPA Science Inventory

    Eelgrass (Zostera marina) blade necrosis resulting from intertidal aerial exposure is describe. A desiccation index was developed to quantitatively assess this damage. This index was then used to evaluate the extent of desiccation damage across intertidal bathymetric slopes (st...

  15. Response of chlorophyll d-containing cyanobacterium Acaryochloris marina to UV and visible irradiations.

    PubMed

    Hou, Xuejing; Raposo, Aaron; Hou, Harvey J M

    2013-11-01

    We have previously investigated the response mechanisms of photosystem II complexes from spinach to strong UV and visible irradiations (Wei et al J Photochem Photobiol B 104:118-125, 2011). In this work, we extend our study to the effects of strong light on the unusual cyanobacterium Acaryochloris marina, which is able to use chlorophyll d (Chl d) to harvest solar energy at a longer wavelength (740 nm). We found that ultraviolet (UV) or high level of visible and near-far red light is harmful to A. marina. Treatment with strong white light (1,200 μmol quanta m(-2) s(-1)) caused a parallel decrease in PSII oxygen evolution of intact cells and in extracted pigments Chl d, zeaxanthin, and α-carotene analyzed by high-performance liquid chromatography, with severe loss after 6 h. When cells were irradiated with 700 nm of light (100 μmol quanta m(-2) s(-1)) there was also bleaching of Chl d and loss of photosynthetic activity. Interestingly, UVB radiation (138 μmol quanta m(-2) s(-1)) caused a loss of photosynthetic activity without reduction in Chl d. Excess absorption of light by Chl d (visible or 700 nm) causes a reduction in photosynthesis and loss of pigments in light harvesting and photoprotection, likely by photoinhibition and inactivation of photosystem II, while inhibition of photosynthesis by UVB radiation may occur by release of Mn ion(s) in Mn4CaO5 center in photosystem II. PMID:24158260

  16. Antibacterial potential of biosynthesised silver nanoparticles using Avicennia marina mangrove plant

    NASA Astrophysics Data System (ADS)

    Gnanadesigan, M.; Anand, M.; Ravikumar, S.; Maruthupandy, M.; Syed Ali, M.; Vijayakumar, V.; Kumaraguru, A. K.

    2012-06-01

    The present study was aimed to identify the antibacterial potential of biosynthesised silver nanoparticles using different plant parts (leaves, bark and root) of Avicenna marina mangrove plant. Of the selected three different parts, the leaf extract showed the maximum synthesis of silver nanoparticles. The in vitro antibacterial assay (100 μg disk-1 concentration) showed the results of maximum zone of inhibition with the E. coli (18.40 ± 0.97 mm), and minimum (10.87 ± 1.33 mm) zone of inhibition with S. aureus but the concentrations of MIC and MBC values ranged between 6.25 and 50.0 μg ml-1 between the selected bacterial strains. The FTIR results of most potent leaf extract-synthesized silver nanoparticles showed the prominent peaks (620.967; 1,061.02; 1,116.58; 1,187.94; 1,280.50; 1,353.79; 1,384.64; 1,598.50; 1,629.56; 2,854.14 and 2,927.42) in different ranges. Further, the results of XRD analysis showed the 2 θ intense values (38.11 and 70.57) within the ranges of Bragg's reflection. In addition, the AFM analysis showed the results of particle sizes (71-110 nm), particle roughness (11.8 nm), maximum height of the particle roughness (111.8 nm), and average maximum height of the particle roughness (57.5 nm). It can be concluded from the present findings that, the biosynthesis of silver nanoparticles from the leaf extract of A. marina can be used as potential antibacterial agents.

  17. Size matters: insights from an allometric approach to evaluate control methods for invasive Australian Rhinella marina.

    PubMed

    Beaty, Lynne E; Salice, Christopher J

    2013-10-01

    Invasive species are costly and difficult to control. In order to gain a mechanistic understanding of potential control measures, individual-based models uniquely parameterized to reflect the salient life-history characteristics of invasive species are useful. Using invasive Australian Rhinella marina as a case study, we constructed a cohort- and individual-based population simulation that incorporates growth and body size of terrestrial stages. We used this allometric approach to examine the efficacy of nontraditional control methods (i.e., tadpole alarm chemicals and native meat ants) that may have indirect effects on population dynamics mediated by effects on body size. We compared population estimates resulting from these control methods with traditional hand removal. We also conducted a sensitivity analysis to investigate the effect that model parameters, specifically those associated with growth and body size, had on adult population estimates. Incremental increases in hand removal of adults and juveniles caused nonlinear decreases in adult population estimates, suggesting less return with increased investment in hand-removal efforts. Applying tadpole alarm chemicals or meat ants decreased adult population estimates on the same level as removing 15-25% of adults and juveniles by hand. The combined application of tadpole alarm chemicals and meat ants resulted in approximately 80% decrease in adult abundance, the largest of any applied control method. In further support of the nontraditional control methods, which greatly affected the metamorph stage, our model was most sensitive to changes in metamorph survival, juvenile survival, metamorph growth rate, and adult survival. Our results highlight the use and insights that can be gained from individual-based models that incorporate growth and body size and the potential success that nontraditional control methods could have in controlling established, invasive Rhinella marina populations. PMID:24261039

  18. Growth dynamics of eelgrass, Zostera marina, in the intertidal zone of Seomjin Estuary, Korea

    NASA Astrophysics Data System (ADS)

    Kim, Jeong Bae; Lee, Won-Chan; Lee, Kun-Seop; Park, Jung-Im

    2013-09-01

    To examine the growth dynamics of eelgrass, Zostera marina, in the intertidal zone of Seomjin Estuary, Korea, we surveyed environmental factors such as water temperature, underwater irradiance, tidal exposure, and nutrient concentrations in the water column and sediment pore water in relation to the shoot density, biomass, morphological characteristics, and growth of Z. marina inhabiting the upper and lower intertidal zones. The survey was conducted monthly from January 2003 to December 2004. The water temperature of the two areas displayed seasonal fluctuations. Underwater irradiance was significantly higher in the upper intertidal zone than in the lower intertidal zone. Tidal exposure was also markedly longer in the upper intertidal zone than in the lower intertidal zone, whereas tidal exposure was highest in the spring and lowest in the summer in both areas. Water column NH4 + and sediment pore water NO3 -+NO2 - concentrations were significantly higher in the upper intertidal zone than the lower intertidal zone. The eelgrass shoot density, biomass, morphology, and leaf productivity were significantly higher in the lower intertidal zone than in the upper intertidal zone. Both areas displayed a clear seasonal variation depending on changes in water temperature. However, leaf turnover time was significantly shorter in the upper intertidal zone than in the lower intertidal zone, with a higher turnover rate in the upper intertidal zone. Compared to the seagrasses in the lower intertidal zone, those in the upper intertidal zone showed more effective adaptations to the stress of long tidal exposure through downsizing and increased turnover time. These results suggest that tidal exposure, coupled with desiccation stress, can be a limiting factor for seagrass growth in the intertidal zone, along with underwater irradiance, water temperature, and nutrient availability.

  19. Mortality rate estimation for eelgrass Zostera marina (Potamogetonaceae) using projections from Leslie matrices.

    PubMed

    Flores Uzeta, Olga; Solana Arellano, Elena; Echavarría Heras, Héctor

    2008-09-01

    The main goal of this study is to provide estimations of mean mortality rate of vegetative shoots of the seagrass Zostera marina in a meadow near Ensenada Baja California, using a technique that minimizes destructive sampling. Using cohorts and Leslie matrices, three life tables were constructed, each representing a season within the period of monthly sampling (April 1999 to April 2000). Ages for the cohorts were established in terms of Plastochrone Interval (PI). The matrices were projected through time to estimate the mean total number of individuals at time t, n(t) as well as mortality. We found no statistical differences between observed and predicted mean values for these variables (t = -0.11, p = 0.92 for n(t) and t = 0.69, p = 0.5 for mean rate of mortality). We found high correlation coefficient values between observed and projected values for monthly number of individuals (r = 0.70, p = 0.007) and monthly mortality rates (r = 0.81, p = 0.001). If at a certain time t a sudden environmental change occurs, and as long as the perturbation does not provoke the killing of all the individuals of a given age i for 0 < or = i < or = x - 1, there will be a prevailing number of individuals of age or stage x at a time t+1. This nondestructive technique reduces the number of field visits and samples needed for the demographic analysis of Z. marina, and therefore decreases the disturbance caused by researches to the ecosystem. PMID:19419024

  20. Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones.

    PubMed

    Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

    2016-01-01

    Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern-Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones. PMID:27227327

  1. Photoacclimatory Responses of Zostera marina in the Intertidal and Subtidal Zones

    PubMed Central

    Park, Sang Rul; Kim, Sangil; Kim, Young Kyun; Kang, Chang-Keun; Lee, Kun-Seop

    2016-01-01

    Photoacclimatory responses of the seagrass Zostera marina in the intertidal and subtidal zones were investigated by measuring chlorophyll a fluorescence parameters, photosynthetic pigments, leaf δ13C values, and shoot morphology in two bay systems. Intertidal plants had higher carotenoid concentrations than subtidal plants to avoid photodamage under excess light conditions during the day. The maximum relative electron transport rate (rETRmax) and minimum saturation irradiance (Ek) of the intertidal plants were higher than those of the subtidal plants, whereas photosynthetic efficiency (α) and maximum quantum yield (Fv/Fm) were higher in subtidal plants. The intertidal plants also had significantly greater Stern–Volmer non-photochemical quenching (NPQ) than that of the subtidal plants. These results suggest that the subtidal plants photoacclimated to use limited light more efficiently, and the intertidal plants exhibited photosynthetic responses to minimize photodamage at excess irradiance. The δ13C values of leaf tissues were more negative in the intertidal plants than those in the subtidal plants, suggesting that the intertidal plants used atmospheric or dissolved CO2 for photosynthesis during emersion. Effective quantum yield (ΔF/Fm´) in the intertidal plants decreased more slowly after emersion than that in the subtidal plants, indicating higher desiccation tolerance of the intertidal plants. The intertidal plants also recovered more rapidly from desiccation damage than the subtidal plants, suggesting photosynthetic adaptation to desiccation stress. The photosynthetic plasticity of Z. marina in response to variable environmental conditions most likely allows this species to occur in the intertidal and subtidal zones. PMID:27227327

  2. The role of marinas and recreational boating in the occurrence and distribution of exotic caprellids (Crustacea: Amphipoda) in the Western Mediterranean: Mallorca Island as a case study

    NASA Astrophysics Data System (ADS)

    Ros, Macarena; Vázquez-Luis, Maite; Guerra-García, José M.

    2013-10-01

    In the Mediterranean Sea, the number of alien marine crustacean species has increased over the past two decades. However, knowledge about small alien marine crustaceans, like caprellid amphipods, is still very scarce. To understand the role of marinas and recreational boating in the early step of the invasion process by non-indigenous caprellids, we studied the recreational boating pressure and the spatial distribution of caprellid species in Mallorca Island. We collected caprellids from 14 marinas and 9 exposed intertidal rocky shores between November 2011 and April 2012 and we analyzed the differences in habitat use of native and exotic caprellids. Eight caprellid species, six native and two exotic, were found. Alien caprellids were only present in marinas, reaching high densities of population. The analysis of recreational boating pressure reveals that Palma-Migjorn is the area that is subject to the highest potential risk of introduction of exotic species via ship fouling. In the secondary dispersal of alien caprellids, the study reflects that recreational boating seems effective as a secondary vector in the transport of exotic species from marinas to marinas but not from marinas to natural and exposed areas. An illustrated key of caprellids from Balearic Island is provided to differentiate native and non-indigenous species.

  3. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-01

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy. PMID:27276665

  4. Morphological characterization of Eustrongylides sp. larvae (Nematoda, Dioctophymatoidea) parasite of Rhinella marina (Amphibia: Bufonidae) from Eastern Amazonia.

    PubMed

    Melo, Francisco Tiago de Vasconcelos; Melo, Caroline do Socorro Barros; Nascimento, Luciana de Cássia Silva do; Giese, Elane Guerreiro; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2016-06-01

    Absctract Eustrongylides spp. nematodes have birds as final hosts and uses other vertebrates as intermediate/paratenic host (fish, amphibians and reptiles) and have zoonotic potential. In amphibians, the larvae may be located in the subcutaneous tissues, liver and mesentery, between the muscle fibres, especially in the lower limbs. Rhinella marina, which is widely observed in Brazil, has exhibited complex diversity in its helminth fauna, reflecting the unique habitat of the Amazon biome. For the first time, this study describes the morphological aspects of third-stage larvae of Eustrongylides sp. in Rhinella marina from Santa Cruz do Ararí, Marajó Archipelago, Eastern Amazonia, using light and scanning electron microscopy. PMID:27334826

  5. Assessment of trace metal bioaccumulation by Avicennia marina (Forsk.) in the last remaining mangrove stands in Manila Bay, the Philippines.

    PubMed

    Gabriel, Ana Veronica S; Salmo, Severino G

    2014-12-01

    Concentrations of lead (Pb), copper (Cu), zinc (Zn), and cadmium (Cd) were evaluated in the sediments, roots and leaves of a mangrove species (Avicennia marina) in Las Piñas-Parañaque Critical Habitat and Ecotourism Area (LPPCHEA), Manila Bay. The concentrations showed a general pattern of Zn > Pb > Cu > Cd in sediments, Cu > Pb > Zn > Cd in roots and Cu > Zn > Pb > Cd in leaves. The trace metal concentrations in both sediments and plant tissues were below contamination threshold levels. Based on computed bioaccumulation indices, A. marina could be used for the phytostabilization and phytoextraction of Cu and Cd. The LPPCHEA mangrove ecosystem is an ecologically important ecosystem that will limit the spread of trace metals to the surrounding environment. PMID:25365960

  6. Structure, Aboveground Biomass, and Soil Characterization of Avicennia marina in Eastern Mangrove Lagoon National Park, Abu Dhabi

    NASA Astrophysics Data System (ADS)

    Alsumaiti, Tareefa Saad Sultan

    Mangrove forests are national treasures of the United Arab Emirates (UAE) and other arid countries with limited forested areas. Mangroves form a crucial part of the coastal ecosystem and provide numerous benefits to society, economy, and especially the environment. Mangrove trees, specifically Avicennia marina, are studied in their native habitat in order to characterize their population structure, aboveground biomass, and soil properties. This study focused on Eastern Mangrove Lagoon National Park in Abu Dhabi, which was the first mangrove protected area to be designated in UAE. In situ measurements were collected to estimate Avicennia marina status, mortality rate (%), height (m), crown spread (m), stem number, diameter at breast height (cm), basal area (m), and aboveground biomass (t ha-1 ). Small-footprint aerial light detection and ranging (LIDAR) data acquired by UAE were processed to characterize mangrove canopy height and aboveground biomass density. This included extraction of LIDAR-derived height percentile statistics, segmentation of the forest into structurally homogenous units, and development of regression relationships between in situ reference and remote sensing data using a machine learning approach. An in situ soil survey was conducted to examine the soils' physical and chemical properties, fertility status, and organic matter. The data of soil survey were used to create soil maps to evaluate key characteristics of soils, and their influence on Avicennia marina in Eastern Mangrove Lagoon National Park. The results of this study provide new insights into Avicennia marina canopy population, structure, aboveground biomass, and soil properties in Abu Dhabi, as data in such arid environments is lacking. This valuable information can help in managing and preserving this unique ecosystem.

  7. [Determination of apparent mean mass of proteins associated with heme in the hemoglobin molecule of Arenicola marina (L.), Annelida, Polychaeta].

    PubMed

    Toulmond, A

    1979-02-12

    Protein and iron concentrations and maximum combined oxygen concentration were measured in the blood of the lugworm Arenicola marina. The calculated mean molecular mass of the heme-associated proteins was higher than that reported for known invertebrate and vertebrate intracellular hemoglobins. The difference is probably due to the presence of polypeptide chains not linked to heme groups in the extracellular annelid hemoglobins. PMID:111865

  8. High-quality draft genome sequence of Kocuria marina SO9-6, an actinobacterium isolated from a copper mine

    PubMed Central

    Castro, Daniel B.A.; Pereira, Letícia Bianca; Silva, Marcus Vinícius M. e; Silva, Bárbara P. da; Palermo, Bruna Rafaella Z.; Carlos, Camila; Belgini, Daiane R.B.; Limache, Elmer Erasmo G.; Lacerda, Gileno V. Jr; Nery, Mariana B.P.; Gomes, Milene B.; Souza, Salatiel S. de; Silva, Thiago M. da; Rodrigues, Viviane D.; Paulino, Luciana C.; Vicentini, Renato; Ferraz, Lúcio F.C.; Ottoboni, Laura M.M.

    2015-01-01

    An actinobacterial strain, designated SO9-6, was isolated from a copper iron sulfide mineral. The organism is Gram-positive, facultatively anaerobic, and coccoid. Chemotaxonomic and phylogenetic properties were consistent with its classification in the genus Kocuria. Here, we report the first draft genome sequence of Kocuria marina SO9-6 under accession JROM00000000 (http://www.ncbi.nlm.nih.gov/nuccore/725823918), which provides insights for heavy metal bioremediation and production of compounds of biotechnological interest. PMID:26484219

  9. Growth responses of the mangrove Avicennia marina to salinity: development and function of shoot hydraulic systems require saline conditions

    PubMed Central

    Nguyen, Hoa T.; Stanton, Daniel E.; Schmitz, Nele; Farquhar, Graham D.; Ball, Marilyn C.

    2015-01-01

    Background and Aims Halophytic eudicots are characterized by enhanced growth under saline conditions. This study combines physiological and anatomical analyses to identify processes underlying growth responses of the mangrove Avicennia marina to salinities ranging from fresh- to seawater conditions. Methods Following pre-exhaustion of cotyledonary reserves under optimal conditions (i.e. 50 % seawater), seedlings of A. marina were grown hydroponically in dilutions of seawater amended with nutrients. Whole-plant growth characteristics were analysed in relation to dry mass accumulation and its allocation to different plant parts. Gas exchange characteristics and stable carbon isotopic composition of leaves were measured to evaluate water use in relation to carbon gain. Stem and leaf hydraulic anatomy were measured in relation to plant water use and growth. Key Results Avicennia marina seedlings failed to grow in 0–5 % seawater, whereas maximal growth occurred in 50–75 % seawater. Relative growth rates were affected by changes in leaf area ratio (LAR) and net assimilation rate (NAR) along the salinity gradient, with NAR generally being more important. Gas exchange characteristics followed the same trends as plant growth, with assimilation rates and stomatal conductance being greatest in leaves grown in 50–75 % seawater. However, water use efficiency was maintained nearly constant across all salinities, consistent with carbon isotopic signatures. Anatomical studies revealed variation in rates of development and composition of hydraulic tissues that were consistent with salinity-dependent patterns in water use and growth, including a structural explanation for low stomatal conductance and growth under low salinity. Conclusions The results identified stem and leaf transport systems as central to understanding the integrated growth responses to variation in salinity from fresh- to seawater conditions. Avicennia marina was revealed as an obligate halophyte

  10. Annual variation of biomass and photosynthesis in Zostera marina L. along the Pacific Coast of Baja California, Mexico

    USGS Publications Warehouse

    Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

    2003-01-01

    Density, biomass, morphology, phenology and photosynthetic characteristics of Zostera marina were related to continuous measurements of in situ irradiance, attenuation coefficient and temperature at three coastal lagoons in Baja California, Mexico. In situ irradiance was approximately two-fold lower at San Quintin Bay (SQ) than at Ojo de Liebre Lagoon (OL) and San Ignacio Lagoon (SI). As a consequence of the greater irradiance plants at OL and SI were established 1 m deeper within the water column than those at SQ. At SQ, there was a four-fold variation in biomass of Z. marina caused by changes on shoot length and not shoot density, while at OL and SI biomass and shoot length did not fluctuate significantly throughout the year. Reproductive shoot density reached maximum values concomitantly with the greater irradiance during spring-summer, however, the density was approximately three-fold greater at SQ than at the southern coastal lagoons. While irradiance levels were two-fold greater at the southern lagoons, in general, photosynthetic characteristics were similar among all three lagoons. The hours of light saturated photosynthesis, calculated from their photosynthetic characteristics and irradiance measurements, suggest that photosynthesis of shoots from OL and SI are saturated for more than 6 h per day throughout the year, while shoots from SQ are likely light limited during approximately 15% of the year. Consequently, an increase in attenuation coefficient values in the water column will likely decrease light availability to Z. marina plants at SQ, potentially decreasing their survival.

  11. Anonymous nuclear loci in the white-faced storm-petrel Pelagodroma marina and their applicability to other Procellariiform seabirds.

    PubMed

    Silva, Mónica C; Duarte, Margarida A; Coelho, M Manuela

    2011-01-01

    Procellariiform seabirds are among the avian species with the fastest rates of extinction due to interactions with fisheries and introduction of alien predators to the breeding colonies. Conservation and management policies targeting populations of these species must include information on colony demographics and levels of isolation and genetic markers go a long way toward providing reliable estimates of these parameters. To this end, we report isolation and characterization of 14 anonymous nuclear loci, with average length of 657 bp, in the pelagic seabird White-faced Storm-petrel Pelagodroma marina, a species for which there is virtually no genetic information available. These loci, initially isolated from a genomic library built from P. marina, were further tested, for a range of conditions, in 7 other species representing all Procellariiform families. We found high levels of cross-species amplification success, varying between 79% and 86% in representatives of Diomedeidae, Procellariidae, Pelecanoididae, and other Hydrobatidae. We also sequenced 11 loci for 22 P. marina individuals and report higher levels of anonymous genetic variation (π = 0.002), with an average of 1 single nucleotide polymorphism every 100 bp surveyed, relative to the levels found on a typically variable intron in avian species. These markers will be a valuable tool in future population genetics and phylogenetic studies, particularly of nonmodel seabird species. PMID:21447754

  12. Bioaccumulation and distribution of metals in sediments and Avicenna marina tissues in the Hara Biosphere Reserve, Iran.

    PubMed

    Nowrouzi, Mohsen; Pourkhabbaz, Alireza; Rezaei, Mohammadreza

    2012-10-01

    The metal pollution in Sediments and Avicenna marina tissues in the Hara Biosphere Reserve was monitored for Lead (Pb), Cadmium (Cd), and Nickel (Ni) with atomic absorption spectrometer. The results showed that the mean concentration of Pb, Cd, and Ni in the water and sediments were much higher than the recommended threshold limits in the most stations, also the highest means of Pb, Cd, and Ni were observed in Avicenna roots and it were 25.26 ± 4.86, 2.17 ± 0.74, and 26.72 ± 6.17 (μg g(-1)) respectively. Calculating BCF (bioconcentration factor) index illustrates that A. marina accumulates Pb, Cd, and Ni 1.62, 1.52 and 0.73 times greater than sediment levels respectively, So it can show that A. marina may be employed as a biological indicator exposure of Cd, Pb, and Ni with temporal monitoring, also the factories were main sources of metals contamination in the Hara Biosphere Reserve. PMID:22829000

  13. Trace elements in the sediments of a large Mediterranean marina (Port Camargue, France): levels and contamination history.

    PubMed

    Briant, Nicolas; Bancon-Montigny, Chrystelle; Elbaz-Poulichet, Françoise; Freydier, Rémi; Delpoux, Sophie; Cossa, Daniel

    2013-08-15

    The study of trace elements (Cu, Zn, Pb, As, Hg) and butyltin concentrations in the sediments of Port Camargue enabled assessment of the levels and history of the contamination of the largest European marina linked with the use of antifouling paints. Surface sediments near the boat maintenance area were heavily contaminated with up to 1497 μg g(-1) of Cu, 475 μg g(-1) of Zn, 0.82 μg g(-1) of Hg, 94 μg g(-1) of Pb and over 10,000 ngSn g(-1) of tributyltin (TBT). High concentrations of Hg and TBT indicate ongoing sources of these elements despite the ban on their use as biocides in paints. Sediment cores provided records of contamination since 1969. The peak concentrations of As, Hg, Pb and TBT in the sediment profile reflect their presence on boat hulls when the marina was built at the end of the 1960s. Degradation of TBT in the sediments near the boat maintenance area is slow compared to other less contaminated area of the marina. PMID:23790459

  14. Long-term exposure of polychaetes to caffeine: Biochemical alterations induced in Diopatra neapolitana and Arenicola marina.

    PubMed

    Pires, Adília; Almeida, Ângela; Calisto, Vânia; Schneider, Rudolf J; Esteves, Valdemar I; Wrona, Frederick J; Soares, Amadeu M V M; Figueira, Etelvina; Freitas, Rosa

    2016-07-01

    In the last decade studies have reported the presence of several pharmaceutical drugs in aquatic environments worldwide and an increasing effort has been done to understand the impacts induced on wildlife. Among the most abundant drugs in the environment is caffeine, which has been reported as an effective chemical anthropogenic marker. However, as for the majority of pharmaceuticals, scarce information is available on the adverse effects of caffeine on marine benthic organisms, namely polychaetes which are the most abundant group of organisms in several aquatic ecossystems. Thus, the present study aimed to evaluate the biochemical alterations induced by environmentally relevant concentrations of caffeine on the polychaete species Diopatra neapolitana and Arenicola marina. The results obtained demonstrated that after 28 days exposure oxidative stress was induced in both species, especially noticed in A. marina, resulting from the incapacity of antioxidant and biotransformation enzymes to prevent cells from lipid peroxidation. The present study further revealed that D. neapolitana used glycogen and proteins as energy to develop defense mechanisms while in A. marina these reserves were maintained independently on the exposure concentration, reinforcing the low capacity of this species to fight against oxidative stress. PMID:27112728

  15. Massisteria marina has a sister: Massisteria voersi sp. nov., a rare species isolated from coastal waters of the Baltic Sea.

    PubMed

    Mylnikov, Alexander P; Weber, Felix; Jürgens, Klaus; Wylezich, Claudia

    2015-08-01

    For many years, the genus Massisteria (Cercozoa, Leucodictyida) comprised only one species, M. marina. This small species has a biphasic life cycle and feeds through filose, radiating pseudopodia. It has a distinct swimming form and is regularly detected in association with detritus aggregates. However, environmental sequences closely related to this species indicate a larger species richness than hitherto described for the genus Massisteria. Here we provide the first report of Massisteria voersi sp. nov., investigated with microscopic and molecular methods. Several strains of this new species were isolated from brackish water at a Baltic Sea coastal monitoring station. Their characteristics are typical of the genus. Massisteria voersi differs from M. marina by smaller cell size (2.3-3 μm vs. 2.5-9 μm) and absent fused motile cells. Additionally, in contrast to M. marina, the new species lacks a paranuclear body and its kinetosomes are arranged in parallel. Both species are quite distantly related regarding their 18S rRNA gene sequences. The sparse availability of environmental sequences closely related to M. voersi as well as our preliminary results from fluorescence in situ hybridization studies suggest that this new species is a representative of low-abundance populations comprising the so-called "rare biosphere." PMID:26163290

  16. Effects of conventional and biodegradable microplastics on a marine ecosystem engineer (Arenicola marina) and sediment nutrient cycling.

    PubMed

    Green, Dannielle Senga; Boots, Bas; Sigwart, Julia; Jiang, Shan; Rocha, Carlos

    2016-01-01

    Effects of microplastic pollution on benthic organisms and ecosystem services provided by sedimentary habitats are largely unknown. An outdoor mesocosm experiment was done to realistically assess the effects of three different types of microplastic pollution (one biodegradable type; polylactic acid and two conventional types; polyethylene and polyvinylchloride) at increasing concentrations (0.02, 0.2 and 2% of wet sediment weight) on the health and biological activity of lugworms, Arenicola marina (Linnaeus, 1758), and on nitrogen cycling and primary productivity of the sediment they inhabit. After 31 days, A. marina produced less casts in sediments containing microplastics. Metabolic rates of A. marina increased, while microalgal biomass decreased at high concentrations, compared to sediments with low concentrations or without microplastics. Responses were strongest to polyvinylchloride, emphasising that different materials may have differential effects. Each material needs to be carefully evaluated in order to assess their risks as microplastic pollution. Overall, both conventional and biodegradable microplastics in sandy sediments can affect the health and behaviour of lugworms and directly or indirectly reduce primary productivity of these habitats. PMID:26552519

  17. Excitation energy transfer in intact cells and in the phycobiliprotein antennae of the chlorophyll d containing cyanobacterium Acaryochloris marina.

    PubMed

    Theiss, Christoph; Schmitt, Franz-Josef; Pieper, Jörg; Nganou, Collins; Grehn, Moritz; Vitali, Marco; Olliges, Rachel; Eichler, Hans Joachim; Eckert, Hann-Jörg

    2011-08-15

    The cyanobacterium Acaryochloris marina is unique because it mainly contains Chlorophyll d (Chl d) in the core complexes of PS I and PS II instead of the usually dominant Chl a. Furthermore, its light harvesting system has a structure also different from other cyanobacteria. It has both, a membrane-internal chlorophyll containing antenna and a membrane-external phycobiliprotein (PBP) complex. The first one binds Chl d and is structurally analogous to CP43. The latter one has a rod-like structure consisting of three phycocyanin (PC) homohexamers and one heterohexamer containing PC and allophycocyanin (APC). In this paper, we give an overview on the investigations of excitation energy transfer (EET) in this PBP-light-harvesting system and of charge separation in the photosystem II (PS II) reaction center of A. marina performed at the Technische Universität Berlin. Due to the unique structure of the PBP antenna in A. marina, this EET occurs on a much shorter overall time scale than in other cyanobacteria. We also briefly discuss the question of the pigment composition in the reaction center (RC) of PS II and the nature of the primary donor of the PS II RC. PMID:21396735

  18. Influence of Zostera marina canopies on unidirectional flow, hydraulic roughness and sediment movement

    NASA Astrophysics Data System (ADS)

    Lefebvre, A.; Thompson, C. E. L.; Amos, C. L.

    2010-09-01

    Seagrasses develop extensive or patchy underwater meadows in coastal areas around the world, forming complex, highly productive ecosystems. Seagrass canopies exert strong effects on water flow inside and around them, thereby affecting flow structure, sediment transport and benthic ecology. The influence of Zostera marina canopies on flow velocity, turbulence, hydraulic roughness and sediment movement was evaluated through laboratory experiments in 2 flumes and using live Z. marina and a mobile sand bed. Profiles of instantaneous velocities were measured and sediment movement was identified upstream, within and downstream of patches of different sizes and shoot density and at different free-stream velocities. Flow structure was characterised by time-averaged velocity, turbulence intensity and Turbulent Kinetic Energy (TKE). When velocity data were available above the canopy, they were fitted to the Law of the Wall and shear velocities and roughness lengths were calculated. When a seagrass canopy was present, three layers were distinguishable in the water column: (1) within canopy represented by low velocities and high turbulence; (2) transition zone around the height of the canopy, where velocities increased, turbulence decreased and TKE was high; and (3) above canopy where velocities were equal or higher than free-stream velocities and turbulence and TKE were lower than below. Shoot density and patch-width influenced this partitioning of the flow when the canopy was long enough (based on flume experiments, at least more than 1 m-long). The enhanced TKE observed at the canopy/water interface suggests that large-scale turbulence is generated at the canopy surface. These oscillations, likely to be related to the canopy undulations, are then broken down within the canopy and high-frequency turbulence takes place near the bed. This turbulence 'cascade' through the canopy may have an important impact on biogeochemical processes. The velocity above the canopy generally

  19. The MARINA model (Model to Assess River Inputs of Nutrients to seAs): Model description and results for China.

    PubMed

    Strokal, Maryna; Kroeze, Carolien; Wang, Mengru; Bai, Zhaohai; Ma, Lin

    2016-08-15

    Chinese agriculture has been developing fast towards industrial food production systems that discharge nutrient-rich wastewater into rivers. As a result, nutrient export by rivers has been increasing, resulting in coastal water pollution. We developed a Model to Assess River Inputs of Nutrients to seAs (MARINA) for China. The MARINA Nutrient Model quantifies river export of nutrients by source at the sub-basin scale as a function of human activities on land. MARINA is a downscaled version for China of the Global NEWS-2 (Nutrient Export from WaterSheds) model with an improved approach for nutrient losses from animal production and population. We use the model to quantify dissolved inorganic and organic nitrogen (N) and phosphorus (P) export by six large rivers draining into the Bohai Gulf (Yellow, Hai, Liao), Yellow Sea (Yangtze, Huai) and South China Sea (Pearl) in 1970, 2000 and 2050. We addressed uncertainties in the MARINA Nutrient model. Between 1970 and 2000 river export of dissolved N and P increased by a factor of 2-8 depending on sea and nutrient form. Thus, the risk for coastal eutrophication increased. Direct losses of manure to rivers contribute to 60-78% of nutrient inputs to the Bohai Gulf and 20-74% of nutrient inputs to the other seas in 2000. Sewage is an important source of dissolved inorganic P, and synthetic fertilizers of dissolved inorganic N. Over half of the nutrients exported by the Yangtze and Pearl rivers originated from human activities in downstream and middlestream sub-basins. The Yellow River exported up to 70% of dissolved inorganic N and P from downstream sub-basins and of dissolved organic N and P from middlestream sub-basins. Rivers draining into the Bohai Gulf are drier, and thus transport fewer nutrients. For the future we calculate further increases in river export of nutrients. The MARINA Nutrient model quantifies the main sources of coastal water pollution for sub-basins. This information can contribute to formulation of

  20. Ecophysiological differences between three mangrove seedlings (Kandelia obovata, Aegiceras corniculatum, and Avicennia marina) exposed to chilling stress.

    PubMed

    Peng, Ya-Lan; Wang, You-Shao; Fei, Jiao; Sun, Cui-Ci; Cheng, Hao

    2015-10-01

    Although the cold-resistant ability of mangroves varies greatly with species, the physiological mechanism remains unclear. The chilling stress effects on morphological changes, photosynthetic pigments, reactive oxygen species (ROS), malondialdehyde (MDA) and several antioxidants, were studied in leaves of three mangrove seedlings (Kandelia obovata, Aegiceras corniculatum and Avicennia marina). Results showed that both K. obovata and A. corniculatum exhibited lighter chilling damage, lower chilling injury rates and higher survival rates compared to A. marina. Reductions of chlorophylls (Chls) were observed in all the three mangroves, and the highest was detected in A. marina. Significant increases in content of ROS (hydrogen peroxide, H2O2; hydroxyl radicals, OH⋅) and MDA were observed in both A. marina and A. corniculatum, whereas chilling stressed K. obovata showed a decrease in H2O2 content, constant OH⋅ level and instantaneous increase of MDA. The contents of proline and water-soluble protein exhibited similar stress-time dependent increases in all mangroves, while A. corniculatum showed the highest increase of proline and relatively higher increase of water-soluble protein. The catalase activities significantly decreased with stress time in all mangroves, while K. obovata showed the least reduction. An increase in ascorbic acid (AsA) content and activities of superoxide dismutase, peroxidase (POD), and ascorbate peroxidase (APX) were also detected in all the three mangroves, while K. obovata showed the highest increases. These results indicate that chilling-tolerance of mangroves is associated with the efficiency of antioxidants, as confirmed by principal component analysis. The AsA, APX and POD in K. obovata may play more important role in control of oxidative stresses than those in the other two species. Furthermore, the higher cold-resistance of A. corniculatum compared to A. marina may be partly associated with its higher proline accumulation. The

  1. Ortleppascaris sp. and your host Rhinella marina: A proteomic view into a nematode–amphibian relationship

    PubMed Central

    Silva, Jefferson Pereira e; Furtado, Adriano Penha; Santos, Jeannie Nascimento dos

    2014-01-01

    The success of the helminth–host relationship depends on a biochemical molecular arsenal. Perhaps the proteome is the largest and most important set of this weaponry, in which the proteins have a crucial role in vital processes to the parasite/host relationship, from basic metabolism and energy production to complex immune responses. Nowadays, the bioproducts expressed by the parasites are under the “spotlight” of immunoassays and biochemical analysis in helminthology, especially in proteomic analysis, which has provided valuable information about the physiology of the infecting agent. Looking into this point of view, why not turn to the infected agent as well? This study characterised the proteomic profile of fluid-filled fibrous cysts of encapsulated Ortleppascaris sp. larvae in the hepatic parenchyma of their intermediate host, the amphibian Rhinella marina. The proteins were separated by two-dimensional electrophoresis and identified by MS with the aid of Peptide Mass Fingerprint. A total of 54 molecules were analysed in this system, revealing a complex protein profile with molecules related to basic metabolic processes of the parasite, energy production, oxi-reduction and oxidative stress processes as well as molecules related to the host response. This study contributes to proteomic studies of protein markers of the development, infectivity, virulence and co-existence of helminths and their hosts. PMID:25161910

  2. Larger Body Size at Metamorphosis Enhances Survival, Growth and Performance of Young Cane Toads (Rhinella marina)

    PubMed Central

    Cabrera-Guzmán, Elisa; Crossland, Michael R.; Brown, Gregory P.; Shine, Richard

    2013-01-01

    Body size at metamorphosis is a key trait in species (such as many anurans) with biphasic life-histories. Experimental studies have shown that metamorph size is highly plastic, depending upon larval density and environmental conditions (e.g. temperature, food supply, water quality, chemical cues from conspecifics, predators and competitors). To test the hypothesis that this developmental plasticity is adaptive, or to determine if inducing plasticity can be used to control an invasive species, we need to know whether or not a metamorphosing anuran’s body size influences its subsequent viability. For logistical reasons, there are few data on this topic under field conditions. We studied cane toads (Rhinella marina) within their invasive Australian range. Metamorph body size is highly plastic in this species, and our laboratory studies showed that larger metamorphs had better locomotor performance (both on land and in the water), and were more adept at catching and consuming prey. In mark-recapture trials in outdoor enclosures, larger body size enhanced metamorph survival and growth rate under some seasonal conditions. Larger metamorphs maintained their size advantage over smaller siblings for at least a month. Our data support the critical but rarely-tested assumption that all else being equal, larger body size at metamorphosis is likely to enhance an individual’s long term viability. Thus, manipulations to reduce body size at metamorphosis in cane toads may help to reduce the ecological impact of this invasive species. PMID:23922930

  3. Sodium and Potassium Compartmentation and Transport across the Roots of Intact Spergularia marina1

    PubMed Central

    Lazof, Dennis; Cheeseman, John M.

    1988-01-01

    The Na+ and K+ transport characteristics of Spergularia marina (L.) Griseb. were considered in order to compare the systems by which these two physiologically different cations are managed during initial acquisition and subsequent partitioning in midvegetative plants. Uptake of 22Na+ and 42K+ and redistribution of labels in pulse-chase studies were compared under steady state growth conditions or with the concentration of one of the ions elevated. At high external concentrations, the initial 42K+ accumulation and transport to the shoot was associated with a small, rapidly exchanging, cellular compartment similar to that previously indicated for Na+ (D Lazof, JM Cheeseman 1986 Plant Physiol 81: 742-747). At 1 mol m−3, K+ was conducted to the shoot through a root compartment, the specific activity of which rose much more slowly than the rapidly exchanging compartment. After a lag of approximately 5 minutes, 42K+ translocation approached a constant rate with a half-time of 14 minutes compared to 5 minutes for 22Na+ or for 42K+ at higher external levels. At all external levels, prolonged translocation of 42K+ was measured when a 10 minute pulse was followed by an unlabeled chase, again suggesting a conducting compartment distinct from that for Na+. It is suggested that the K+ conducting compartment, possibly the `bulk cytoplasm,' is associated with the active K+ transport system generally found in higher plants. PMID:16666454

  4. Seawater salinity and blood acid-base balance in the lugworm, Arenicola marina (L.).

    PubMed

    Toulmond, A; Jouin, C

    1992-03-01

    The kinetics of variations in the blood acid base balance (ABB) were investigated in a moderately euryhaline osmoconformer, the lugworm Arenicola marina (L.), exposed to natural and experimental hypo- or hyperosmotic shocks. In natural as well as in experimental conditions, a hyposmotic shock induced a transient and essentially metabolic acidosis, probably linked to the ionic readjustments following the shock, which was rapidly overridden by a metabolic alkalosis. In field conditions, a new ABB equilibrium was then attained, the metabolic alkalosis being neutralized by the respiratory and metabolic acidosis occurring normally in the lugworm during low tide. Conversely, in the normoxic conditions of our laboratory experiments, a new ABB equilibrium was never reached. Under experimental conditions, a hyperosmotic shock always induced a respiratory and metabolic acidosis. In the field, this phenomenon must occur at the beginning of high tide and must help to restore normal blood ABB in lugworms submitted to a moderate hyposmotic shock during low tide. All the observed blood ABB variations reveal the complex intracellular processes through which the lugworm submitted to moderate osmotic shocks tentatively regulates, sometimes without any real success, its osmoticity and volume. Obviously, complementary physical, physiological and behavioral mechanisms allow the lugworm to live in sediments washed by almost fresh water during a 7-8 h 'low tide'. PMID:1604064

  5. Ortleppascaris sp. and your host Rhinella marina: A proteomic view into a nematode-amphibian relationship.

    PubMed

    Silva, Jefferson Pereira E; Furtado, Adriano Penha; Santos, Jeannie Nascimento Dos

    2014-08-01

    The success of the helminth-host relationship depends on a biochemical molecular arsenal. Perhaps the proteome is the largest and most important set of this weaponry, in which the proteins have a crucial role in vital processes to the parasite/host relationship, from basic metabolism and energy production to complex immune responses. Nowadays, the bioproducts expressed by the parasites are under the "spotlight" of immunoassays and biochemical analysis in helminthology, especially in proteomic analysis, which has provided valuable information about the physiology of the infecting agent. Looking into this point of view, why not turn to the infected agent as well? This study characterised the proteomic profile of fluid-filled fibrous cysts of encapsulated Ortleppascaris sp. larvae in the hepatic parenchyma of their intermediate host, the amphibian Rhinella marina. The proteins were separated by two-dimensional electrophoresis and identified by MS with the aid of Peptide Mass Fingerprint. A total of 54 molecules were analysed in this system, revealing a complex protein profile with molecules related to basic metabolic processes of the parasite, energy production, oxi-reduction and oxidative stress processes as well as molecules related to the host response. This study contributes to proteomic studies of protein markers of the development, infectivity, virulence and co-existence of helminths and their hosts. PMID:25161910

  6. Preparation of intact chloroplasts by chemically induced lysis of the green alga Dunaliella marina.

    PubMed

    Kombrink, E; Wöber, G

    1980-07-01

    A method for the isolation in high yield of intact chloroplasts from the unicellular green alga Dunaliella marina (Volvocales) is described. This procedure uses chemically induced lysis of cells with the polycationic macromolecules, DEAE-dextran (M=500,000) or poly-D,L-lysine (M=30,000-70,000). Reaction conditions were optimized with respect to obtaining a high yield of intact chloroplasts, after isopycnic centrifugation in a linear sucrose density gradient, by varying the concentration of polycation and the temperature and pH of incubation. Broken chloroplasts devoid of the stromal marker enzymes fructosebisphosphate phosphatase and ribulosebisphosphate carboxylase, but containing mitochondrial (fumarase) and microbody (catalase) contamination, were banded at a bouyant density of 1.18 g cm(-3). Intact chloroplasts, as indicated by their retention of alkaline fructosebisphosphate phosphatase and ribulosebisphosphate carboxylase, were found in 30% yield (chlorophyll in intact cells, 100%) at an equilibrium density of 1.24 g cm(-3). Contamination by cytoplasmic material (pyruvate kinase), mitochondria, and microbodies was less than 8% each. PMID:24306242

  7. A genetic perspective on rapid evolution in cane toads (Rhinella marina).

    PubMed

    Rollins, Lee A; Richardson, Mark F; Shine, Richard

    2015-05-01

    The process of biological invasion exposes a species to novel pressures, in terms of both the environments it encounters and the evolutionary consequences of range expansion. Several invaders have been shown to exhibit rapid evolutionary changes in response to those pressures, thus providing robust opportunities to clarify the processes at work during rapid phenotypic transitions. The accelerating pace of invasion of cane toads (Rhinella marina) in tropical Australia during its 80-year history has been well characterized at the phenotypic level, including common-garden experiments that demonstrate heritability of several dispersal-relevant traits. Individuals from the invasion front (and their progeny) show distinctive changes in morphology, physiology and behaviour that, in combination, result in far more rapid dispersal than is true of conspecifics from long-colonized areas. The extensive body of work on cane toad ecology enables us to place into context studies of the genetic basis of these traits. Our analyses of differential gene expression from toads from both ends of this invasion-history transect reveal substantial upregulation of many genes, notably those involved in metabolism and cellular repair. Clearly, then, the dramatically rapid phenotypic evolution of cane toads in Australia has been accompanied by substantial shifts in gene expression, suggesting that this system is well suited to investigating the genetic underpinnings of invasiveness. PMID:25894012

  8. Restoring Eelgrass (Zostera marina L.) Habitats Using a Simple and Effective Transplanting Technique

    PubMed Central

    Liu, Xujia; Zhang, Xiaomei; Wang, Feng; Yang, Hongsheng

    2014-01-01

    Eelgrass beds in coastal waters of China have declined substantially over the past 30 years. In this study, a simple new transplanting technique was developed for eelgrass (Zostera marina L.) restoration. To assist in anchoring single shoots, several rhizomes of rooted shoots were bound to a small elongate stone (50–150 g) with biodegradable thread (cotton or hemp), and then the bound packet was buried at an angle in the sediments at a depth of 2–4 cm. This stone anchoring method was used to transplant eelgrass in early November 2009 and late May 2010 in Huiquan Bay, Qingdao. The method led to high success. Three month survivorship of the transplanted shoots at the two transplant sites was >95%. From April 20 to November 19, 2012, the following characteristics of the 2009 and 2010 transplanted eelgrass beds were monitored: morphological changes, shoot density, shoot height, leaf biomass, and sediment particle size. Results showed that the sexual reproduction period of the planted eelgrass was from April to August, and vegetative reproduction reached its peak in autumn. Maximum shoot height and biomass were observed in June and July. After becoming established, the transplanted eelgrass beds were statistically equal to natural eelgrass beds nearby in terms of shoot height, biomass, and seasonal variations. This indicates that the transplant technique is effective for eelgrass restoration in coastal waters. PMID:24695414

  9. Influence of Starvation on Respiratory Metabolism and Pyridine Nucleotide Levels in the Marine Dinoflagellate Oxyrrhis marina.

    PubMed

    Osma, Natalia; Aristizabal, Manuela; Fernández-Urruzola, Igor; Packard, Theodore T; Gómez, May

    2016-04-01

    Respiratory oxygen consumption rate (RO2) and potential respiration (Φ) has been monitored during a food deprivation period in the heterotrophic dinoflagellate Oxyrrhis marina. Φ was determined by measuring the activity of the enzymes from the electron transport system (ETS), the major contributor to the oxygen consumption in the cells. Additionally, we have quantified for the first time the concentration of pyridine nucleotides in this organism, both in their oxidized (NAD(P)(+)) and reduced forms (NAD(P)H). These molecules are the main electron donors at the beginning of the ETS. We observed a dramatic decrease in RO2 within the first days, whereas Φ steadily, but more gradually declined during the entire experiment. This led to a decrease of the RO2 /Φ with time. The intracellular total pool of NAD and NADP concentration, in turn, dropped exponentially in a manner parallel to the RO2. This strong decrease was mainly driven by a reduction in the concentration of the oxidized forms. The present work constitutes a first step in clarifying the role of intracellular NAD and NADP concentrations and the redox status in the control of in vivo RO2 in marine organisms. PMID:26994731

  10. Restoring eelgrass (Zostera marina L.) habitats using a simple and effective transplanting technique.

    PubMed

    Zhou, Yi; Liu, Peng; Liu, Bingjian; Liu, Xujia; Zhang, Xiaomei; Wang, Feng; Yang, Hongsheng

    2014-01-01

    Eelgrass beds in coastal waters of China have declined substantially over the past 30 years. In this study, a simple new transplanting technique was developed for eelgrass (Zostera marina L.) restoration. To assist in anchoring single shoots, several rhizomes of rooted shoots were bound to a small elongate stone (50-150 g) with biodegradable thread (cotton or hemp), and then the bound packet was buried at an angle in the sediments at a depth of 2-4 cm. This stone anchoring method was used to transplant eelgrass in early November 2009 and late May 2010 in Huiquan Bay, Qingdao. The method led to high success. Three month survivorship of the transplanted shoots at the two transplant sites was >95%. From April 20 to November 19, 2012, the following characteristics of the 2009 and 2010 transplanted eelgrass beds were monitored: morphological changes, shoot density, shoot height, leaf biomass, and sediment particle size. Results showed that the sexual reproduction period of the planted eelgrass was from April to August, and vegetative reproduction reached its peak in autumn. Maximum shoot height and biomass were observed in June and July. After becoming established, the transplanted eelgrass beds were statistically equal to natural eelgrass beds nearby in terms of shoot height, biomass, and seasonal variations. This indicates that the transplant technique is effective for eelgrass restoration in coastal waters. PMID:24695414

  11. Influence of temperature and salinity on germination of eelgrass ( Zostera marina L.) seeds

    NASA Astrophysics Data System (ADS)

    Pan, Jinhua; Jiang, Xin; Li, Xiaojie; Cong, Yizhou; Zhang, Zhuangzhi; Li, Zhiling; Zhou, Weili; Han, Houwei; Luo, Shiju; Yang, Guanpin

    2011-06-01

    Seagrass restoration as part of ocean ecosystem protection has been launched for many years all over the world, but intensive research on this subject in China has just begun in recent years. Seed broadcasting has been widely accepted as the most potentially useful method for seagrass restoration over large areas. We examined the influence of key environmental factors on seed germination to help promote eelgrass bed restoration. Under anoxic conditions, the influence of temperature and salinity on the germination rate of eelgrass ( Zostera marina L.) seeds was examined at different combinations of four temperatures (4, 9, 14, and 24°C) and nine salinities (5 to 45, increment of 5). The effect of significant interaction of temperature and salinity on germination rate was observed (ANOVA) ( P<0.001). The highest germination rate (83.3 ± 3.5)% was reached in 8 weeks at 14°C and salinity 5. Higher temperature significantly increased the germination rate at salinity 5 ( P<0.001) during the whole observation period except for 24°C, while lower salinity significantly increased the germination rate at 14°C ( P<0.001). Although significant interaction was found between temperature and salinity ( P<0.001), the influence of salinity was stronger than that of temperature for the germination of eelgrass seeds. These results provide useful information for the propagation of artificial seedlings for seagrass restoration in China.

  12. Conversion of Eelgrass into effective building insulation. [Eelgrass-Zostera marina

    SciTech Connect

    Rue, M.L.

    1984-03-23

    To test the suitability of accelerated solar drying of Zostera marina (Eelgrass), a solar heated drying chamber was constructed. Initially, a small pilot unit was assembled to verify the concept. Temperatures well over 200/sup 0/F were achieved with this unit, so a larger version of approximately 50 square feet of solar surface was constructed. The principal used in the construction was as noted on the following description, however, a stationary unit, not floating, was used for the drying tests. It was found that eelgrass could be dried to a form suitable for use in approximately 4 to 6 hours. During that time, the water content of the leaves was reduced from 4 to 5 times their dry weight to equilibrium moisture level. This compares wtih a reported 3 to 4 weeks drying time required of open air sun drying used in the early part of this century. See following chart for a typical drying run. The major problem encountered during the drying cycle was that the eelgrass on the top surface, as it dried, formed an insulating blanket over the grass below. It became necessary to periodically turn over the material for more uniform drying. A slowly rotating drying chamber would resolve this problem on future designs. The paper contains further information on various seagrasses.

  13. Policy plans and management measures to restore eelgrass (Zostera marina L.) in the Dutch Wadden Sea

    NASA Astrophysics Data System (ADS)

    de Jonge, V. N.; de Jong, D. J.; van Katwijk, M. M.

    2000-07-01

    The Dutch Wadden Sea has been changed dramatically over the last centuries by human activities like land reclamation and different forms of fishery. This has, amongst other things, led to changes in the number of biological communities. One of the changes was the near extinction of eelgrass (Zostera marina L.) in the Dutch Wadden Sea. The deterioration of the area led to policy plans in the late 1980s that aimed at restoring the original natural communities of which the eelgrass community was one. This paper presents a restoration strategy which contains a selection procedure for suitable transplantation sites. The selection procedure is based on factors such as sediment composition, exposure time, current velocity and wave action. These were combined in a GIS-based map integrating these factors. One important action in the restoration process is to increase the number of freshwater discharge points to meet the requirements of the brackish water community in general and the growing conditions for eelgrass in particular.

  14. Conservation of eelgrass (Zostera marina) genetic diversity in a mesocosm-based restoration experiment.

    PubMed

    Ort, Brian S; Cohen, C Sarah; Boyer, Katharyn E; Reynolds, Laura K; Tam, Sheh May; Wyllie-Echeverria, Sandy

    2014-01-01

    Eelgrass (Zostera marina) forms the foundation of an important shallow coastal community in protected estuaries and bays. Widespread population declines have stimulated restoration efforts, but these have often overlooked the importance of maintaining the evolutionary potential of restored populations by minimizing the reduction in genetic diversity that typically accompanies restoration. In an experiment simulating a small-scale restoration, we tested the effectiveness of a buoy-deployed seeding technique to maintain genetic diversity comparable to the seed source populations. Seeds from three extant source populations in San Francisco Bay were introduced into eighteen flow-through baywater mesocosms. Following seedling establishment, we used seven polymorphic microsatellite loci to compare genetic diversity indices from 128 shoots to those found in the source populations. Importantly, allelic richness and expected heterozygosity were not significantly reduced in the mesocosms, which also preserved the strong population differentiation present among source populations. However, the inbreeding coefficient F IS was elevated in two of the three sets of mesocosms when they were grouped according to their source population. This is probably a Wahlund effect from confining all half-siblings within each spathe to a single mesocosm, elevating F IS when the mesocosms were considered together. The conservation of most alleles and preservation of expected heterozygosity suggests that this seeding technique is an improvement over whole-shoot transplantation in the conservation of genetic diversity in eelgrass restoration efforts. PMID:24586683

  15. Assessing establishment success of Zostera marina transplants through measurements of shoot morphology and growth

    NASA Astrophysics Data System (ADS)

    Li, Wen-Tao; Kim, Jong-Hyeob; Park, Jung-Im; Lee, Kun-Seop

    2010-07-01

    Since significant seagrass declines have been reported worldwide, numerous seagrass restoration projects through transplantation have been attempted in recent decades. In this study, Zostera marina shoots were transplanted into Jindong Bay on the southern coast of Korea in November 2006 to assess establishment success of the transplants to a new transplant environment. Shoot density, individual shoot weight, productivity, and morphological characteristics of transplants and reference plants in the vicinity of the planting site were monitored monthly for 13 months. Although shoot size of transplants was smaller than that of reference plants at the start of transplantation, individual shoot weight, leaf width, shoot height, and rhizome diameter of transplants increased rapidly, reaching even higher values than those of reference plants 5 months after transplantation. These results suggest that eelgrass transplants established morphologically 5 months after transplantation. Shoot productivity of transplants was lower than that of reference population during the first 5-6 months following transplantation, but became higher than that of reference population 6 months after transplantation. The higher transplant productivity was likely due to the lower shoot density at the transplant site than that at the reference population. Rapid changes in shoot morphology and growth of transplants indicated that eelgrass transplants had great morphological plasticity and established successfully in the new environment within 5-6 months. In addition to survival rates of transplants, monitoring of shoot morphology and growth appeared to be an effective approach for accurate assessment of the establishment success of eelgrass transplant.

  16. Temporal and spatial dynamics of ephemeral drift-algae in eelgrass, Zostera marina, beds

    NASA Astrophysics Data System (ADS)

    Rasmussen, Jonas Ribergaard; Pedersen, Morten Foldager; Olesen, Birgit; Nielsen, Søren Laurentius; Pedersen, Troels Møller

    2013-03-01

    Aggregations of unattached, filamentous macroalgae showed high temporal and spatial dynamics in two shallow and relatively sheltered eelgrass (Zostera marina) beds in Aarhus Bay and the Isefjord, Denmark. The changes in algal abundance were followed in permanent plots at 1-3 days intervals during three different periods of the growth season (May-September). Drift-algal assemblages were present within the 3000 m2 study areas in relatively high and constant abundance (>47% cover) throughout the study period. However, significant changes in average site cover did occur on short timescales (days) suggesting that variability in algal cover may be undetected in monthly assessments. The changes in cover were caused either by algal growth or by physical forces moving large aggregations of algae into or out of the study area. Within plots (1 m2) variability was even higher and algal cover changed regularly between observations (days). Hence, the algae were continuously rearranged within the eelgrass beds; also during periods with no change in average algal cover. The variability in cover of individual plots was negatively correlated to eelgrass cover, suggesting that algae were retained by the eelgrass leaves. This highly dynamic nature of filamentous macroalgal aggregations in eelgrass beds should be considered when evaluating implications of macroalgal blooms for seagrass growth and survival. A frequent relocation of drift-algae at small spatial scale may moderate the formation of poor oxygen conditions within mats and shorten the duration of exposure experienced by individual shoots.

  17. Expression pattern of arenicins—the antimicrobial peptides of polychaete Arenicola marina

    PubMed Central

    Maltseva, Arina L.; Kotenko, Olga N.; Kokryakov, Vladimir N.; Starunov, Viktor V.; Krasnodembskaya, Anna D.

    2014-01-01

    Immune responses of invertebrate animals are mediated through innate mechanisms, among which production of antimicrobial peptides play an important role. Although evolutionary Polychaetes represent an interesting group closely related to a putative common ancestor of other coelomates, their immune mechanisms still remain scarcely investigated. Previously our group has identified arenicins—new antimicrobial peptides of the lugworm Arenicola marina, since then these peptides were thoroughly characterized in terms of their structure and inhibitory potential. In the present study we addressed the question of the physiological functions of arenicins in the lugworm body. Using molecular and immunocytochemical methods we demonstrated that arencins are expressed in the wide range of the lugworm tissues—coelomocytes, body wall, extravasal tissue and the gut. The expression of arenicins is constitutive and does not depend on stimulation of various infectious stimuli. Most intensively arenicins are produced by mature coelomocytes where they function as killing agents inside the phagolysosome. In the gut and the body wall epithelia arenicins are released from producing cells via secretion as they are found both inside the epithelial cells and in the contents of the cuticle. Collectively our study showed that arenicins are found in different body compartments responsible for providing a first line of defense against infections, which implies their important role as key components of both epithelial and systemic branches of host defense. PMID:25566093

  18. An ultrastructural study of spermatogenesis and sperm morula breakdown in Arenicola marina (L.) (Annelida: Polychaeta)

    NASA Astrophysics Data System (ADS)

    Pacey, A. A.; Bentley, M. G.

    1992-06-01

    Spermatogenesis in the lugworm Arenicola marina, in common with other members of Arenicolidae, occurs in the coelomic fluid and results in the formation of discs of mature spermatozoa known as a morulae. Within a morula, individual spermatozoa are connected by a common mass of cytoplasm called the cytophore and therefore make up a syncitium. Immediately prior to spawning, and in response to an endocrine substance known as “Sperm Maturation Factor” (SMF), the structure of the sperm morulae breaks down and free spermatozoa are liberated. These are subsequently spawned from the body cavity. The investigation described here uses transmission electron microscopy to investigate the ultrastructural changes, which accompany spermatogenesis and the breakdown of sperm morulae in response to SMF in vitro. The study demonstrates that the cytophore appears to have a key role both during spermatogenesis and during sperm morula breakdown. The ultrastructure of sperm morulae and of mature spermatozoa is described. The structure of spermatozoa is shown to be primitive with a single flagellum which appears to be coiled at its distal end. The phagocytosis of free spermatozoa by coelomocytes is also described and it is suggested that these may play a role in the resorption of unspawned gametes in vivo.

  19. Candidacidal mechanism of the arenicin-3-derived peptide NZ17074 from Arenicola marina.

    PubMed

    Wang, Xiaojie; Wang, Xiumin; Teng, Da; Zhang, Yong; Mao, Ruoyu; Xi, Di; Wang, Jianhua

    2014-09-01

    The candidacidal mechanisms of NZ17074, which is a variant of arenicin-3 from Arenicola marina, against human pathogenic fungus Candida albicans are reported in this work. The minimum inhibitory concentration (MIC) of NZ17074 toward C. albicans was 4 μg/ml, and this peptide exerted marked candidacidal activity in an energy-dependent and salt-sensitive manner. The flow cytometric analysis using propidium iodide (PI) showed that the plasma membrane of cells treated with NZ17074 was perturbed and that the cells were arrested in the G2/M phase. The dihydrorhodamine-123 (DHR-123) staining showed that the reactive oxygen species (ROS) production of C. albicans increased after exposure to NZ17074. Typical cellular disruption events, such as mitochondrial degradation, nuclear fragmentation, nuclear membrane disruption, and chromatin condensation, were further revealed through rhodamine 123 (RH123) staining, 4',6-diamidino-2-phenylindole (DAPI) staining, and transmission electron microscopy. In addition, the intracellular localization of this peptide was concentration dependent: it was located in the membrane at low concentrations (4 to 8 μg/ml) and penetrated into the cytoplasm at high concentrations (16 to 32 μg/ml). Our results suggested that NZ17074 exerts its candidacidal effects by disrupting the cell membrane, inducing apoptosis, and interrupting the cell cycle. These findings showed the potential of NZ17074 as a new candidacidal peptide, in addition to its antibacterial activities. PMID:24816779

  20. Corticosterone-immune interactions during captive stress in invading Australian cane toads (Rhinella marina).

    PubMed

    Graham, Sean P; Kelehear, Crystal; Brown, Gregory P; Shine, Richard

    2012-07-01

    Vertebrates cope with physiological challenges using two major mechanisms: the immune system and the hypothalamic pituitary-adrenal axis (e.g., the glucocorticoid stress response). Because the two systems are tightly integrated, we need simultaneous studies of both systems, in a range of species, to understand how vertebrates respond to novel challenges. To clarify how glucocorticoids modulate the amphibian immune system, we measured three immune parameters and plasma corticosterone (CORT), before and after inflicting a stressor (capture and captive confinement) on introduced cane toads (Rhinella marina) near their invasion front in Australia. Stress increased CORT levels, decreased complement lysis capacity, increased leukocyte oxidative burst, and did not change heterologous erythrocyte agglutination. The strength of the CORT response was positively correlated with leukocyte oxidative burst, and morphological features associated with invasiveness in cane toads (relative leg length) were correlated with stress responsiveness. No immune parameter that we measured was affected by a toad's infection by a parasitic nematode (Rhabdias pseudosphaerocephala), but the CORT response was muted in infected versus uninfected toads. These results illustrate the complex immune-stress interactions in wild populations of a non-traditional model vertebrate species, and describe immune adaptations of an important invasive species. PMID:22713726

  1. Disturbance of benthic infauna by sediment-reworking activities of the lugworm Arenicola marina

    NASA Astrophysics Data System (ADS)

    Flach, E. C.

    The influence of the lugworm Arenicola marina on the abundance of other benthic species was studied in the westernmost part of the Wadden Sea. Small squares (1 m 2) within depopulated 144-m 2 plots were recolonized with various (naturally-occurring) lugworm densities (0-10-20-40-80 and 0-25-50-75-100 per m 2). These plots were sampled during the summer. Lugworms were found to have a strongly negative effect on the densities of C. volutator. At 0-density lugworms, the numbers of C. volutator were high. These were halved at 17 lugworms per m 2 ( i.e. the mean density on the tidal flats of the Dutch Wadden Sea), and were further reduced at higher lugworm densities ( e.g. 20% remained at 40 lugworms per m 2). Laboratory observations of Corophium behaviour in the presence of Arenicola suggest that sediment-reworking lugworms stimulate Corophium to emigrate. Effects of lugworms on other benthic species were also studied in the same way. Lugworms were found to have strongly negative effects on the juvenile densities of various worm and bivalve species ( Nereis diversicolor, Nephtys hombergii, Heteromastus filiformis, Scoloplos armiger, Pygospio elegans, Capitella capitata and Mya arenaria, Cerastoderma edule, Macoma balthica, Angulus tenuis, respectively).

  2. Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments

    PubMed Central

    Chennu, Arjun; Volkenborn, Nils; de Beer, Dirk; Wethey, David S.; Woodin, Sarah A.; Polerecky, Lubos

    2015-01-01

    We used hyperspectral imaging to study short-term effects of bioturbation by lugworms (Arenicola marina) on the surficial biomass of microphytobenthos (MPB) in permeable marine sediments. Within days to weeks after the addition of a lugworm to a homogenized and recomposed sediment, the average surficial MPB biomass and its spatial heterogeneity were, respectively, 150-250% and 280% higher than in sediments without lugworms. The surficial sediment area impacted by a single medium-sized lugworm (~4 g wet weight) over this time-scale was at least 340 cm2. While sediment reworking was the primary cause of the increased spatial heterogeneity, experiments with lugworm-mimics together with modeling showed that bioadvective porewater transport from depth to the sediment surface, as induced by the lugworm ventilating its burrow, was the main cause of the increased surficial MPB biomass. Although direct measurements of nutrient fluxes are lacking, our present data show that enhanced advective supply of nutrients from deeper sediment layers induced by faunal ventilation is an important mechanism that fuels high primary productivity at the surface of permeable sediments even though these systems are generally characterized by low standing stocks of nutrients and organic material. PMID:26230398

  3. Restoring Resiliency: Case Studies from Pacific Northwest Estuarine Eelgrass (Zostera marina L.) Ecosystems

    SciTech Connect

    Thom, Ronald M.; Diefenderfer, Heida L.; Vavrinec, John; Borde, Amy B.

    2012-01-01

    The purpose of many ecological restoration projects is to establish an ecosystem with fully developed structure and function that exhibits resistance to and resilience from disturbances. Coastal restoration projects in the Pacific Northwest provide opportunities to understand what is required to restore the resilience of eelgrass (Zostera marina L.) populations. Factors influencing resilience observed in three case studies of eelgrass restoration include minimum viable population, adaptations of transplant populations, and natural and anthropogenic disturbances at restoration sites. The evaluation of resiliency depends on selecting appropriate monitoring metrics and the frequency and duration of monitoring. Eelgrass area, cover and shoot density provide useful and reliable metrics for quantifying resilience of restored meadows. Further, five years of monitoring of these metrics provides data that can reasonably predict the long-term viability of a planted plot. Eelgrass appears to be a resilient ecosystem in general, though one that data suggest may exhibit tipping points brought about by compounded environmental conditions outside of its tolerance ranges. Explicit inclusion of resilience in the planning and practice of habitat restoration may reduce uncertainties and improve the performance of restored systems by increasing buffering capacity, nurturing sources of renewal (e.g., seeds and rhizomes), and managing for habitat forming and maintaining processes (e.g., sediment dynamics) at multiple scales.

  4. [Absorption and distribution of K, Na and Mg in Avicennia marina seedlings under cadmium stress].

    PubMed

    Lu, Zhi-qiang; Chen, Chang-xu; Ma, Li; Zheng, Wen-jiao

    2015-05-01

    In this paper, mangrove seedlings Avicennia marina were treated with various contents of cadmium (0, 0.5, 5, 25, 50, 100, 150 mg · L(-1)). These seedlings were cultivated by man-made seawater with a salinity of 15 in sand for 90 days in a greenhouse. The absorption and distribution of elements contents (K, Na and Mg) under cadmium stress were investigated at 45th and 90th day, respectively. The results showed that the enrichment of cadmium in the different components of seedlings increased with the increasing cadmium stress level and exposure time. The cadmium contents in roots and cotyledons were relatively higher than in the other components, accounting for 66.9% and 16.3% of cadmium in the seedlings under the 150 mg · L(-1) cadmium stress, respectively. The fall of cotyledons could reduce the damage of cadmium stress to the whole seedlings. The Na contents increased in roots and stems and decreased in leaves and cotyledons after cadmium stress for 90 days. The K content decreased in roots and cotyledons, while had no significant change in stems and leaves. The Mg content in roots, stems, leaves and cotyledons of seedlings treated with cadmium for 90 days were lower than those of the control, and were negatively related to the cadmium content. PMID:26571646

  5. Imposex and tributyltin contamination as a consequence of the establishment of a marina, and increasing yachting activities at Phuket Island, Thailand.

    PubMed

    Bech, Michael

    2002-01-01

    The objective was to investigate how tributyltin (TBT) contamination resulting from the establishment of a new marina and increasing yachting activities at Phuket Island, Thailand affects the area. A minimum of 30 specimen of the mangrove dwelling muricid Chicoreus capucinus were collected at five stations 2 months before and 5, 9, 18 and 33 months after Yacht Haven Marina was constructed. Imposex measured as RPLI and VDSI were significantly correlated to duration of time after construction and distance from the marina. All females developed imposex close to the marina after 18 months, whereas no significant increase occurred at stations more than 2 km from the marina. To evaluate the range of effects of the increasing yachting activities the muricid Thais distinguenda was used as an indicator of imposex at two popular mooring sites for yachts at Phi Phi and Raja Island in Phangna Bay, Thailand. The incidence of imposex was 100% at stations close to the mooring sites. A significant correlation existed between the distance from the sites and the incidence of imposex. The increasing incidence of imposex suggest that TBT contamination is worsening, against global trends, because regulations prohibiting the use of TBT-based paints, do not exist in Thailand. PMID:11911526

  6. The ichthyotoxic alga Chattonella marina induces Na{sup +}, K{sup +}-ATPase, and CFTR proteins expression in fish gill chloride cells in vivo

    SciTech Connect

    Tang, Janet Y.M.; Wong, Chris K.C.; Au, Doris W.T. . E-mail: bhdwtau@cityu.edu.hk

    2007-02-02

    Our previous studies demonstrated that the ichthyotoxic Chattonella marina stimulated proliferation of branchial chloride cell (CC) and induced osmotic distress akin to hyperactive elimination of ions in fish (Rhabdosargus sarba). To ascertain the in vivo effects of C. marina on key CC ion transporters, the localization and expression of Na{sup +}, K{sup +}-ATPase (NKA) and cystic fibrosis transmembrane conductance regulator (CFTR) proteins in response to C. marina exposure were investigated, using a quantitative immunocytochemical approach. The polarized distributions of NKA ({alpha} subunit) and CFTR proteins in branchial CCs of R. sarba remained unchanged under C. marina exposure. However, significant inductions of these two ion-transporters were detected in CCs of fish after 6 h exposure. By real-time PCR, no significant changes in gill NKA and CFTR mRNA expressions were detected, suggesting a post-transcriptional pathway is likely involved in regulating the ion transporters abundance. This study is the first to demonstrate the in vivo effects of harmful algal toxin on NKA and CFTR protein expressions in gill transepithelial cells. Taken together, an augmentation of branchial CCs together with hyper-stimulation of NKA and CFTR in CCs attribute to the rapid development of osmotic distress in C. marina susceptible fish.

  7. Metal bioaccumulation and physiological condition of the Pacific oyster (Crassostrea gigas) reared in two shellfish basins and a marina in Normandy (northwest France).

    PubMed

    Séguin, A; Caplat, C; Serpentini, A; Lebel, J M; Menet-Nedelec, F; Costil, K

    2016-05-15

    A 5-month experiment combining a geochemical survey of metals with a bioaccumulation study in batches of Crassostrea gigas was conducted in two shellfish farming areas and a marina in Normandy (France). Various endpoints at different levels of biological organization were studied. ROCCH data showed differences in biota contamination between the two shellfish areas but the present study revealed only slight differences in metallic contamination and biomarkers. By contrast, significantly different values were recorded in the marina in comparison with the two other sites. Indeed, higher levels of Cd, Cu and Zn were measured in the oysters from the marina, and these oysters also showed a poorer physiological condition (e.g., condition index, histopathological alterations and neutral lipid content). For coastal monitoring, the multi-biomarker approach coupled with an assessment of metallic contamination in biota appeared to be suitable for discriminating spatial differences in environmental quality after only a few months of exposure. PMID:26975610

  8. Comparative studies on the fish-killing activities of Chattonella marina isolated in 1985 and Chattonella antiqua isolated in 2010, and their possible toxic factors.

    PubMed

    Cho, Kichul; Sakamoto, Jun; Noda, Tatsuki; Nishiguchi, Tomoki; Ueno, Mikinori; Yamasaki, Yasuhiro; Yagi, Motoaki; Kim, Daekyung; Oda, Tatsuya

    2016-04-01

    Chattonella antiqua isolated in 2010 showed extremely more potent fish-killing activities against red sea bream, Japanese horse mackerel, and blue damselfish than those of Chattonella marina isolated in 1985. Chemiluminescence and electron spin resonance (ESR) analyses suggested greater reactive oxygen species (ROS)-producing activity of C. antiqua than that of C. marina. Sodium benzoate, a hydroxyl radical scavenger, significantly suppressed the fish-killing activity of C. antiqua on blue damselfish. The chlorophyll level in the gill tissue of blue damselfish exposed to flagellate cells increased along with the exposure time, and the cell count of gill-associated C. antiqua estimated with chlorophyll level was higher than that of C. marina. These results suggest that the ROS-producing activity and affinity of Chattonella cells to the gill surface may be important factors influencing the fish-killing activity of Chattonella species. PMID:26654750

  9. Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina

    PubMed Central

    2015-01-01

    Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on

  10. Annual variations of biomass and photosynthesis in Zostera marina at its southern end of distribution in the North Pacific

    USGS Publications Warehouse

    Cabello-Pasini, Alejandro; Munoz-Salazar, R.; Ward, D.H.

    2003-01-01

    Density, biomass, morphology, phenology and photosynthetic characteristics of Zostera marina were related to continuous measurements of in situ irradiance, attenuation coefficient and temperature at three coastal lagoons in Baja California, Mexico. In situ irradiance was approximately two-fold lower at San Quintin Bay (SQ) than at Ojo de Liebre Lagoon (OL) and San Ignacio Lagoon (SI). As a consequence of the greater irradiance, plants at OL and SI were established 1 m deeper within the water column than those at SQ. At SQ, there was a four-fold variation in biomass of Z. marina caused by changes on shoot length and not shoot density, while at OL and SI biomass and shoot length did not fluctuate significantly throughout the year. Reproductive shoot density reached maximum values concomitantly with the greatest irradiance during spring-summer, however, the density was approximately three-fold greater at SQ than at the southern coastal lagoons. While irradiance levels were two-fold greater at the southern lagoons, in general, photosynthetic characteristics were similar among all three lagoons. The hours of light saturated photosynthesis, calculated from their photosynthetic characteristics and irradiance measurements, suggest that photosynthesis of shoots from OL and SI are saturated for more than 6 h per day throughout the year, while shoots from SQ are likely light limited during approximately 15% of the year. Consequently, an increase in attenuation coefficient values in the water column will likely decrease light availability to Z. marina plants at SQ, potentially decreasing their survival. ?? 2003 Elsevier Science B.V. All rights reserved.

  11. Long-Term Field Study Reveals Subtle Effects of the Invasive Alga Sargassum muticum upon the Epibiota of Zostera marina.

    PubMed

    DeAmicis, Stacey; Foggo, Andrew

    2015-01-01

    Invasive species can alter coastal ecosystems both directly, e.g. through competition for substratum and nutrients, and indirectly. Indirect effects may be mediated by creation of dissimilar or inimical habitats, changes in predator and/or prey assemblages, alterations in associated biota, and perturbations of water movement and thermal regimes. Previous studies have shown that invasive algae can modify native habitat architecture, disrupt intricately linked food webs and alter epibiotic assemblages. In the UK, the seagrass Zostera marina supports a diverse epibiotic assemblage, influencing key factors such as sediment dynamics, depositional regime and trophic linkages. Increasing encroachment of the invasive alga Sargassum muticum into seagrass meadows changes the physical and chemical characteristics of the local environment and creates the potential for changes in the epibionts associated with the seagrass blades, threatening the integrity of the seagrass ecosystem. We investigated the effects of S. muticum invasion upon the epibiota of Z. marina in a drowned river valley in SW England seasonally from spring to autumn over four years in an in-situ manipulative experiment, comparing permanent quadrats with and without artificially introduced S. muticum. Epibiota were weighed, identified to the most detailed operational taxonomic unit (OTU) possible, and unitary organisms were enumerated. Multivariate PERMANOVA+ analysis revealed significant differences in epibiont assemblages between Sargassum treatments. Linear mixed effects models indicated that differences in epibiota assemblage composition were not reflected as significant differences in mean biomass per sample, or number of epibiont OTUs per sample. We conclude that S. muticum invasion into Z. marina meadows may significantly alter the species composition and abundance distribution of epibiotic assemblages found on the blades of the seagrass. Thus S. muticum invasion could have more wide-reaching effects on

  12. Analysis of EST data of the marine protist Oxyrrhis marina, an emerging model for alveolate biology and evolution

    PubMed Central

    2014-01-01

    Background The alveolates include a large number of important lineages of protists and algae, among which are three major eukaryotic groups: ciliates, apicomplexans and dinoflagellates. Collectively alveolates are present in virtually every environment and include a vast diversity of cell shapes, molecular and cellular features and feeding modes including lifestyles such as phototrophy, phagotrophy/predation and intracellular parasitism, in addition to a variety of symbiotic associations. Oxyrrhis marina is a well-known model for heterotrophic protist biology, and is now emerging as a useful organism to explore the many changes that occurred during the origin and diversification of dinoflagellates by virtue of its phylogenetic position at the base of the dinoflagellate tree. Results We have generated and analysed expressed sequence tag (EST) sequences from the alveolate Oxyrrhis marina in order to shed light on the evolution of a number of dinoflagellate characteristics, especially regarding the emergence of highly unusual genomic features. We found that O. marina harbours extensive gene redundancy, indicating high rates of gene duplication and transcription from multiple genomic loci. In addition, we observed a correlation between expression level and copy number in several genes, suggesting that copy number may contribute to determining transcript levels for some genes. Finally, we analyze the genes and predicted products of the recently discovered Dinoflagellate Viral Nuclear Protein, and several cases of horizontally acquired genes. Conclusion The dataset presented here has proven very valuable for studying this important group of protists. Our analysis indicates that gene redundancy is a pervasive feature of dinoflagellate genomes, thus the mechanisms involved in its generation must have arisen early in the evolution of the group. PMID:24512041

  13. Urinary corticosterone metabolite responses to capture and captivity in the cane toad (Rhinella marina).

    PubMed

    Narayan, Edward J; Cockrem, John F; Hero, Jean-Marc

    2011-09-01

    Urinary corticosterone metabolite responses to capture have recently been shown for the first time in amphibians, and in the present study urinary corticosterone metabolite responses to capture and to confinement in captivity were measured in adult cane toads (Rhinella marina) in Queensland, Australia. An adrenocorticotropic hormone (ACTH) challenge was used to provide a biological validation for urinary corticosterone metabolite concentrations measured by radioimmunoassay (RIA). Urinary corticosterone metabolite increased 1-2 days after ACTH but not saline injection and then returned to initial values, indicating that the RIA could detect changes in corticosterone secretion in toads. Urinary corticosterone metabolite responses to short-term capture and restraint in plastic bags were first apparent 2h after capture of wild toads. Toads held communally in captivity for 5 days had elevated urinary corticosterone metabolite concentrations. Mean corticosterone concentrations declined significantly after a further 7 days in individual housing chambers. There was no sex difference in urinary corticosterone metabolite responses of toads to ACTH challenge, short-term capture or captivity. The relative amount of variation in the mean corticosterone responses was quantified by calculating coefficients of variation (CV) for each mean corticosterone response. Mean corticosterone at 0 min was more variable for captive toads than wild toads. Furthermore, initial corticosterone concentrations (0 min) were more variable than concentrations during the ACTH challenge, short-term capture and captivity. There was little change in the amount of variation of mean corticosterone levels between male and female toads with increasing time in captivity (12-29 days). This study has shown individual corticosterone responses of amphibians for the first-time, and has provided a novel method for quantifying the relative amount of variation in amphibian corticosterone responses. PMID:21756910

  14. Effect of a Punica granatum enriched diet on immunocompetence in Rhinella marina.

    PubMed

    Parker, Anna N; Ward, Chelsea K; Estes, N Robert

    2014-07-01

    Direct ingestion of plant materials has been shown to have immunomodulatory effects on a variety of herbivores. Studies have also shown that compounds ingested indirectly by predators through prey items can affect the general physiology of the ingesting organism. Relatively little data exists, however, concerning the modulation of a predator's immune system via compounds obtained indirectly through prey. In this study, we sought to determine if the immune-stimulating properties of Punica granatum (pomegranate) could be conveyed from a prey organism, Acheta domestica, to a predator, Rhinella marina, through diet specialization. Experimental crickets were fed a diet of agar supplemented with 10 mg/mL of lyophilized, powdered, whole pomegranate while control crickets were fed unadulterated agar. Experimental toads consumed a diet consisting of crickets fed the pomegranate-enriched diet, while control toads consumed a diet consisting of crickets fed the standard agar diet. Blood samples were taken weekly and leukocyte profiles and neutrophil phagocytic activity were determined for all toads over an 8-week period. Complement activity was measured at 6 weeks. Toads fed the pomegranate-enriched diet showed altered leukocyte profiles as evidenced by an increase in circulating eosinophil number and a decrease in the number of circulating lymphocytes, monocytes, and basophils as compared to controls, indicating an immunomodulatory effect of the pomegranate-enhanced diet. These results suggest that pomegranate-derived immunomodulatory compounds can be transferred from prey to predator, and suggests that the flora in the environment where insectivores forage could have a significant effect on the physiology of the animal. PMID:24664895

  15. Distribution, structure and function of Nordic eelgrass (Zostera marina) ecosystems: implications for coastal management and conservation

    PubMed Central

    Boström, Christoffer; Baden, Susanne; Bockelmann, Anna-Christina; Dromph, Karsten; Fredriksen, Stein; Gustafsson, Camilla; Krause-Jensen, Dorte; Möller, Tiia; Nielsen, Søren Laurentius; Olesen, Birgit; Olsen, Jeanine; Pihl, Leif; Rinde, Eli

    2014-01-01

    This paper focuses on the marine foundation eelgrass species, Zostera marina, along a gradient from the northern Baltic Sea to the north-east Atlantic. This vast region supports a minimum of 1480 km2 eelgrass (maximum >2100 km2), which corresponds to more than four times the previously quantified area of eelgrass in Western Europe.Eelgrass meadows in the low salinity Baltic Sea support the highest diversity (4–6 spp.) of angiosperms overall, but eelgrass productivity is low (<2 g dw m-2 d-1) and meadows are isolated and genetically impoverished. Higher salinity areas support monospecific meadows, with higher productivity (3–10 g dw m-2 d-1) and greater genetic connectivity. The salinity gradient further imposes functional differences in biodiversity and food webs, in particular a decline in number, but increase in biomass of mesograzers in the Baltic.Significant declines in eelgrass depth limits and areal cover are documented, particularly in regions experiencing high human pressure. The failure of eelgrass to re-establish itself in affected areas, despite nutrient reductions and improved water quality, signals complex recovery trajectories and calls for much greater conservation effort to protect existing meadows.The knowledge base for Nordic eelgrass meadows is broad and sufficient to establish monitoring objectives across nine national borders. Nevertheless, ensuring awareness of their vulnerability remains challenging. Given the areal extent of Nordic eelgrass systems and the ecosystem services they provide, it is crucial to further develop incentives for protecting them. © 2014 The Authors. Aquatic Conservation: Marine and Freshwater Ecosystems published by John Wiley & Sons, Ltd. PMID:26167100

  16. On the profile evolution of three artificial pebble beaches at Marina di Pisa, Italy

    NASA Astrophysics Data System (ADS)

    Bertoni, Duccio; Sarti, Giovanni

    2011-07-01

    In this paper, the profiles of three artificial coarse-grained beaches located at Marina di Pisa (Tuscany, Italy) were monitored from April 2008 to May 2009 in order to define the response of the beaches to major storms that occurred during the study. Two beaches are similar, the third differs in length and in the level of protection, being less than half the length of the others and devoid of an offshore submerged breakwater. The work was achieved by means of accurate topographic surveys intended to reconstruct the beach profile from the backshore up to the foreshore-upper shoreface transition (step). The surveys were performed with an RTK-GPS instrument, which provided extremely precise recording of the beach. The most significant features of the beaches were tracked during each survey; in particular, the landward foot of the storm berm, the crest of the storm berm, the coastline, and the step crest were monitored. Five cross-shore transects were traced on each beach. Along these transects, any meaningful slope change was recorded to obtain accurate sections of the beach. The field datasets were processed with AutoCAD software to compare the beach profile evolution during the year-long research. The results showed a comparable evolution of the twin beaches: the resulting storm berm retreat of about 15 to 19 m is a remarkable feature considering the coarse grain size and the offshore protection. Due to the absence of the breakwater, the third beach was characterized by even higher values of recession (over 20 m), and showed hints of wave reflection-related processes after the huge, steep storm berm had been formed and grown after the high energy events. These processes were not as evident on the twin beaches. These results underline the different response of three similar protection schemes, and the importance that frequent monitoring of the beach morphology holds when it comes to coastal management issues.

  17. The uptake and distribution of copper in the lugworm, Arenicola marina (annelida, polychaeta)

    NASA Astrophysics Data System (ADS)

    Everaarts, J. M.

    The uptake and distribution of copper in the polychaetous worm Arenicola marina (L.) have been studied both under experimental conditions and in a natural environmental situation, by analyzing the whole body and three body-compartments; body-wall, intestine and blood. No relationship between the copper concentrations in various fractions of the sediment and any of the body-compartments could be found. Under experimental conditions, the copper concentrations in the blood were higher than in the intestine and the body-wall. Uptake of dissolved copper occurred directly from the water. Copper uptake also occurs via sediment at high copper concentrations of the silt fraction of the habitat sediment. The data obtained from the field showed small differences in copper concentrations between blood, intestine and body-wall. The copper concentrations in the blood varied from 1 to 4 μ·cm -3, in the inetestine from 2 to 6μg·g -1, and in the body-wall from 1 to 3 μg·g -1 wet weight. A significant correlation existed between blood cooper concentration and body weight: small (young) individuals had higher copper concentrations in their blood than larger (older) ones. This means that young animals will encounter more stress at similar environmental copper levels than older animals. The concentration in the different body-compartments appears to be dependent on the season the samples were taken. The copper concentration in the intestine and the body decreased from April to November, whereas the blood copper concentration increased.

  18. The effect of colliery waste on the feeding of the lugworm Arenicola marina

    NASA Astrophysics Data System (ADS)

    Hyslop, Brian T.; Davies, Mark S.

    1999-09-01

    Sandy shores in northeast England that are heavily contaminated by colliery waste (essentially coal particles) have lower species richnesses and diversities than less contaminated shores. Analyses of the sediment utilised putatively as food, the gut contents, and the faecal casts of lugworms Arenicola marina (L.) (Annelida: Polychaeta) from a heavily contaminated site (Newbiggin) and a site lightly contaminated (Seahouses) were performed to determine the effect of colliery waste on the feeding of this deposit-feeder, which has been reported to decline in abundance at contaminated sites. Colliery-waste content of sediment was 10 to 18 times greater at Newbiggin than at Seahouses. At Newbiggin the sediment contained significantly higher levels of colliery waste than did the gut contents or faeces, which were not significantly different from each other. At Seahouses the colliery-waste contents of sediment, gut, and faeces were not significantly different. Particle-size distributions in sediment, gut, and faeces from lugworms at Seahouses were similar, while at Newbiggin the sediment contained a greater proportion of larger particles (>250 μm) than did the gut contents or the faeces. These results suggest that lugworms at heavily contaminated sites are selective feeders, rejecting coal particles perhaps on the basis of particle size. We did not detect selectivity in animals at the less contaminated site. Lugworms from Seahouses, however, avoided burrowing into sediment containing colliery waste both when the waste was on the surface and buried. Lugworms from Newbiggin avoided burrowing into colliery waste only when it was buried. These data suggest a chemosensory response to colliery waste.

  19. Reinekea marina sp. nov., isolated from seawater, and emended description of the genus Reinekea.

    PubMed

    Kang, Heeyoung; Kim, Haneul; Joung, Yochan; Joh, Kiseong

    2016-01-01

    A Gram-stain-negative, curved rod-shaped and non-pigmented strain, HME8277T, was isolated from surface seawater of the Yellow Sea in the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences showed that the novel strain was related most closely to Reinekea blandensis MED297T (96.4 % 16S rRNA gene sequence similarity), Reinekea aestuarii IMCC4489T (96.3 %) and Reinekea marinisedimentorum KMM 3655T (95.8 %). The major fatty acids were summed feature 3 (comprising C16 : 1ω7c and/or C16 : 1ω6c; 43.0 %), C16 : 0 (19.0 %) and summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c; 15.0 %). The DNA G+C content was 46.1 mol%. The predominant respiratory quinone was Q-8. The major polar lipids of strain HME8277T comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, four unidentified phospholipids and four unidentified lipids. On the basis of polyphasic analyses, strain HME8277T represents a novel species of the genus Reinekea, for which the name Reinekea marina sp. nov. is proposed. The type strain HME8277T ( = KACC 17315T = CECT 8288T). An emended description of the genus Reinekea is also provided. PMID:26518601

  20. Dr. Zompo: an online data repository for Zostera marina and Posidonia oceanica ESTs.

    PubMed

    Wissler, L; Dattolo, E; Moore, A D; Reusch, T B H; Olsen, J L; Migliaccio, M; Bornberg-Bauer, E; Procaccini, G

    2009-01-01

    As ecosystem engineers, seagrasses are angiosperms of paramount ecological importance in shallow shoreline habitats around the globe. Furthermore, the ancestors of independent seagrass lineages have secondarily returned into the sea in separate, independent evolutionary events. Thus, understanding the molecular adaptation of this clade not only makes significant contributions to the field of ecology, but also to principles of parallel evolution as well. With the use of Dr. Zompo, the first interactive seagrass sequence database presented here, new insights into the molecular adaptation of marine environments can be inferred. The database is based on a total of 14 597 ESTs obtained from two seagrass species, Zostera marina and Posidonia oceanica, which have been processed, assembled and comprehensively annotated. Dr. Zompo provides experimentalists with a broad foundation to build experiments and consider challenges associated with the investigation of this class of non-domesticated monocotyledon systems. Our database, based on the Ruby on Rails framework, is rich in features including the retrieval of experimentally determined heat-responsive transcripts, mining for molecular markers (SSRs and SNPs), and weighted key word searches that allow access to annotation gathered on several levels including Pfam domains, GeneOntology and KEGG pathways. Well established plant genome sites such as The Arabidopsis Information Resource (TAIR) and the Rice Genome Annotation Project are interfaced by Dr. Zompo. With this project, we have initialized a valuable resource for plant biologists in general and the seagrass community in particular. The database is expected to grow together with more data to come in the near future, particularly with the recent initiation of the Zostera genome sequencing project.The Dr. Zompo database is available at http://drzompo.uni-muenster.de/ PMID:20157482

  1. Zooshikella marina sp. nov. a cycloprodigiosin- and prodigiosin-producing marine bacterium isolated from beach sand.

    PubMed

    Ramaprasad, E V V; Bharti, Dave; Sasikala, Ch; Ramana, Ch V

    2015-12-01

    A red-pigmented bacterium producing a metallic green sheen, designated strain JC333T, was isolated from a sand sample collected from Shivrajpur-Kachigad beach, Gujarat, India. Phylogenetic analyses based on the 16S rRNA gene sequence of strain JC333T showed highest sequence similarity to Zooshikella ganghwensis JC2044T (99.24 %) and less than 91.94 % similarity with other members of the class Gammaproteobacteria. DNA-DNA hybridizations between JC333T and Z. ganghwensis JC2044T showed low relatedness values of 19 ± 1.3 % (reciprocal 21 ± 2.2 %). The major respiratory quinone was ubiquinone-9 (Q9) and the polar lipid profile was composed of the major components diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminophospholipid and an unidentified lipid. The presence of C16 : 1ω7c/C16 : 1ω6c, C16 : 0, C18 : 1ω7c and C12 : 0 as major fatty acids supported the affiliation of strain JC333T to the genus Zooshikella. Prodigiosin, cycloprodigiosin and eight other prodigiosin analogues were the pigments of JC333T. Characterization based on 16S rRNA gene sequence analysis, physiological parameters, pigment analysis, ubiquinone, and polar lipid and fatty acid compositions revealed that JC333T represents a novel species of the genus Zooshikella, for which the name Zooshikella marina sp. nov. is proposed. The type strain is JC333T ( = KCTC 42659T = LMG 28823T). PMID:26409875

  2. Evidence of additional excitation energy transfer pathways in the phycobiliprotein antenna system of Acaryochloris marina.

    PubMed

    Nganou, A C; David, L; Adir, N; Pouhe, D; Deen, M J; Mkandawire, M

    2015-02-01

    To improve the energy conversion efficiency of solar organic cells, the clue may lie in the development of devices inspired by an efficient light harvesting mechanism of some aquatic photosynthetic microorganisms that are adapted to low light intensity. Consequently, we investigated the pathways of excitation energy transfer (EET) from successive light harvesting pigments to the low energy level inside the phycobiliprotein antenna system of Acaryochloris marina, a cyanobacterium, using a time resolved absorption difference spectroscopy with a resolution time of 200 fs. The objective was to understand the actual biochemical process and pathways that determine the EET mechanism. Anisotropy of the EET pathway was calculated from the absorption change trace in order to determine the contribution of excitonic coupling. The results reveal a new electron energy relaxation pathway of 14 ps inside the phycocyanin component, which runs from phycocyanin to the terminal emitter. The bleaching of the 660 nm band suggests a broader absorption of the terminal emitter between 660 nm and 675 nm. Further, there are trimer depolarization kinetics of 450 fs and 500 fs in high and low ionic strength, respectively, which arise from the relaxation of the β84 and α84 in adjacent monomers of phycocyanin. Under conditions of low ionic strength buffer solution, the evolution of the kinetic amplitude during the depolarization of the trimer is suggestive of trimer conservation within the phycocyanin hexamer. The anisotropy values were 0.38 and 0.40 in high and in low ionic strength, respectively, indicating that there is no excitonic delocalization in the high energy level of phycocyanin hexamers. PMID:25470281

  3. Two-dimensional electrophoresis of Arenicola marina extracellular hemoglobin: separation of chains with identical molecular mass but different isoelectric point.

    PubMed

    Slitine, F E; Toulmond, A

    1991-01-01

    1. On the basis of their molecular masses, four types of polypeptides (A, B, C, D) were obtained by SDS-PAGE of the extracellular hemoglobin of the polychaete annelid Arenicola marina. 2. On 2-dimensional polyacrylamide gel electrophoresis, the erythrocruorin dissociated into six different types of polypeptide chains; A1, A2, B1, B2, C and D. 3. A1 and B1 migrate in 2-dimensional electrophoresis at the same position as alpha and beta chains of human hemoglobin. PMID:1814687

  4. Two new species of Oswaldocruzia (Nematoda: Trichostrongylina: Molineoidea) parasites of the cane toad Rhinella marina (Amphibia: Anura) from Peru.

    PubMed

    Guerrero, Ricardo

    2013-03-01

    Two new species of Oswaldocruzia, O. manuensis sp. nov., and O. urubambaensis sp. nov. are described and illustrated from Peru, these are parasites of the cane toad Rhinella marina. O. manuensis is characterized by having cervical alae which are not well developed, ridges without chitinous supports, caudal bursa type II and branches of fork of dissimilar length. O. urubambaensis is characterized by a caudal bursa of type I, ridges with chitinous supports, a thin cephalic vesicle and origin of rays 9 in tip of the dorsal trunk. PMID:23377910

  5. Hybridization and massive mtDNA unidirectional introgression between the closely related Neotropical toads Rhinella marina and R. schneideri inferred from mtDNA and nuclear markers

    PubMed Central

    2011-01-01

    Background The classical perspective that interspecific hybridization in animals is rare has been changing due to a growing list of empirical examples showing the occurrence of gene flow between closely related species. Using sequence data from cyt b mitochondrial gene and three intron nuclear genes (RPL9, c-myc, and RPL3) we investigated patterns of nucleotide polymorphism and divergence between two closely related toad species R. marina and R. schneideri. By comparing levels of differentiation at nuclear and mtDNA levels we were able to describe patterns of introgression and infer the history of hybridization between these species. Results All nuclear loci are essentially concordant in revealing two well differentiated groups of haplotypes, corresponding to the morphologically-defined species R. marina and R. schneideri. Mitochondrial DNA analysis also revealed two well-differentiated groups of haplotypes but, in stark contrast with the nuclear genealogies, all R. schneideri sequences are clustered with sequences of R. marina from the right Amazon bank (RAB), while R. marina sequences from the left Amazon bank (LAB) are monophyletic. An Isolation-with-Migration (IM) analysis using nuclear data showed that R. marina and R. schneideri diverged at ≈ 1.69 Myr (early Pleistocene), while R. marina populations from LAB and RAB diverged at ≈ 0.33 Myr (middle Pleistocene). This time of divergence is not consistent with the split between LAB and RAB populations obtained with mtDNA data (≈ 1.59 Myr), which is notably similar to the estimate obtained with nuclear genes between R. marina and R. schneideri. Coalescent simulations of mtDNA phylogeny under the speciation history inferred from nuclear genes rejected the hypothesis of incomplete lineage sorting to explain the conflicting signal between mtDNA and nuclear-based phylogenies. Conclusions The cytonuclear discordance seems to reflect the occurrence of interspecific hybridization between these two closely related

  6. Thermostilla marina gen. nov., sp. nov., a thermophilic, facultatively anaerobic planctomycete isolated from a shallow submarine hydrothermal vent.

    PubMed

    Slobodkina, Galina B; Panteleeva, Angela N; Beskorovaynaya, Darya A; Bonch-Osmolovskaya, Elizaveta A; Slobodkin, Alexander I

    2016-02-01

    A novel thermophilic planctomycete (strain SVX8T) was isolated from a shallow submarine hydrothermal vent, Vulcano Island, Italy. The temperature range for growth was 30-68 °C, with an optimum at 55 °C. The pH range for growth was 5.0-9.0, with an optimum at pH 7.0-8.0. Growth was observed at NaCl concentrations ranging from 0.8 to 4.5 % (w/v) with an optimum at 2.5-3.5 % (w/v). The isolate grew anaerobically using a number of mono-, di- and polysaccharides as electron donors and nitrate or elemental sulfur as electron acceptors or by fermentation. Nitrate was reduced to nitrite; sulfur was reduced to sulfide. Strain SVX8T did not grow at atmospheric concentration of oxygen but grew microaerobically (up to 2 % oxygen in the gas phase). The G+C content of the DNA of strain SVX8T was 58.5 mol%. Based on phylogenetic position and phenotypic features, the new isolate is considered to represent a novel species belonging to a new genus in the order Planctomycetales, for which the name Thermostilla marina gen. nov., sp. nov. is proposed. The type strain of Thermostilla marina is SVX8T ( = JCM 19992T = VKM B-2881T). Strain SVX8T is the first thermophilic planctomycete isolated from a marine environment. PMID:26559645

  7. Heart and the peritoneal cover of the gut sinus in the polychaete Arenicola marina: an ultrastructural and autoradiographic study.

    PubMed

    Martynova, Marina G; Chaga, Oleg Y

    2002-12-01

    To elucidate the cellular mechanism underlying the growth of the peritoneal cover of the gut sinus and the heart in the polychaete Arenicola marina, cellular organization of these structures and proliferative potential of their cells were investigated using electron microscopy and electron microscopic autoradiography. Arenicola has a pair of dorsolaterally situated hearts connected to the gut sinus via a short duct and composed of two muscular layers separated by a layer of the extracellular matrix (ECM). The peritoneal cover of the gut sinus and the outer muscular layer of the heart present a myoepithelial layer resting on the ECM. The inner muscular layer of the heart is composed of myofibril-containing cells lacking well-defined polarity in arrangement of organelles. However, their persistent connection to branches of the ECM and the adherens-like intercellular junctions allow for considering the inner layer a modified myoepithelium. In the peritoneal cover of the gut sinus and in both myoepithelial layers of the heart, noncontractile epithelial cells have been observed. As determined by thymidine labeling, these epithelial cells are capable of DNA synthesis, while myoepithelial cells are not. Some suggestions are made about the myogenic nature of the epithelial cells in the investigated structures of A. marina. PMID:12386900

  8. The Structure of Genetic Diversity in Eelgrass (Zostera marina L.) along the North Pacific and Bering Sea Coasts of Alaska

    USGS Publications Warehouse

    Talbot, Sandra; Sage, Kevin; Rearick, Jolene; Fowler, Megan C.; Muñiz-Salazar, Raquel; Baibak, Bethany; Wyllie-Echeverria, Sandy; Cabello-Pasini, Alehandro; Ward, David H.

    2016-01-01

    Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An inverse relationship between genetic diversity and latitude was observed (heterozygosity: R2 = 0.738, P < 0.001; allelic richness: R2 = 0.327, P = 0.047), as was significant genetic partitioning across most sampling sites (θ = 0.302, P < 0.0001). Variance in allele frequency was significantly partitioned by region only in cases when a population geographically in the Gulf of Alaska LME (Kinzarof Lagoon) was instead included with populations in the Eastern Bering Sea LME (θp = 0.128–0.172; P < 0.003), suggesting gene flow between the two LMEs in this region. Gene flow among locales was rarely symmetrical, with notable exceptions generally following net coastal ocean current direction. Genetic data failed to support recent proposals that multiple Zostera species (i.e. Z. japonica and Z. angustifolia) are codistributed with Z. marina in Alaska. Comparative analyses also failed to support the hypothesis that eelgrass populations in the North Atlantic derived from eelgrass retained in northeastern Pacific Last Glacial Maximum refugia. These data suggest northeastern Pacific populations are derived from populations expanding northward from temperate populations following climate amelioration at the terminus of the last Pleistocene glaciation.

  9. Cloning of TPS gene from eelgrass species Zostera marina and its functional identification by genetic transformation in rice.

    PubMed

    Zhao, Feng; Li, Qiuying; Weng, Manli; Wang, Xiuliang; Guo, Baotai; Wang, Li; Wang, Wei; Duan, Delin; Wang, Bin

    2013-12-01

    The full-length cDNA sequence (2613 bp) of the trehalose-6-phosphate synthase (TPS) gene of eelgrass Zostera marina (ZmTPS) was identified and cloned. Z. marina is a kind of seed-plant growing in sea water during its whole life history. The open reading frame (ORF) region of ZmTPS gene encodes a protein of 870 amino acid residues and a stop codon. The corresponding genomic DNA sequence is 3770 bp in length, which contains 3 exons and 2 introns. The ZmTPS gene was transformed into rice variety ZH11 via Agrobacterium-mediated transformation method. After antibiotic screening, molecular characterization, salt-tolerance and trehalose content determinations, two transgenic lines resistant to 150 mM NaCL solutions were screened. Our study results indicated that the ZmTPS gene was integrated into the genomic DNA of the two transgenic rice lines and could be expressed well. Moreover, the detection of the transformed ZmTPS gene in the progenies of the two transgenic lines was performed from T1 to T4 generations; and results suggested that the transformed ZmTPS gene can be transmitted from parent to the progeny in transgenic rice. PMID:24035935

  10. Range-edge genetic diversity: locally poor extant southern patches maintain a regionally diverse hotspot in the seagrass Zostera marina.

    PubMed

    Diekmann, Onno E; Serrão, Ester A

    2012-04-01

    Refugial populations at the rear edge are predicted to contain higher genetic diversity than those resulting from expansion, such as in post-glacial recolonizations. However, peripheral populations are also predicted to have decreased diversity compared to the centre of a species' distribution. We aim to test these predictions by comparing genetic diversity in populations at the limits of distribution of the seagrass Zostera marina, with populations in the species' previously described central diversity 'hotspot'. Zostera marina populations show decreased allelic richness, heterozygosity and genotypic richness in both the 'rear' edge and the 'leading' edge compared to the diversity 'hotspot' in the North Sea/Baltic region. However, when populations are pooled, genetic diversity at the southern range is as high as in the North Sea/Baltic region while the 'leading edge' remains low in genetic diversity. The decreased genetic diversity in these southern Iberian populations compared to more central populations is possibly the effect of drift because of small effective population size, as a result of reduced habitat, low sexual reproduction and low gene flow. However, when considering the whole southern edge of distribution rather than per population, diversity is as high as in the central 'hotspot' in the North Sea/Baltic region. We conclude that diversity patterns assessed per population can mask the real regional richness that is typical of rear edge populations, which have played a key role in the species biogeographical history and as marginal diversity hotspots have very high conservation value. PMID:22369278