Binding to serine 65-phosphorylated ubiquitin primes Parkin for optimal PINK1-dependent phosphorylation and activation.

PubMed

Kazlauskaite, Agne; Martínez-Torres, R Julio; Wilkie, Scott; Kumar, Atul; Peltier, Julien; Gonzalez, Alba; Johnson, Clare; Zhang, Jinwei; Hope, Anthony G; Peggie, Mark; Trost, Matthias; van Aalten, Daan M F; Alessi, Dario R; Prescott, Alan R; Knebel, Axel; Walden, Helen; Muqit, Miratul M K

2015-08-01

Mutations in the mitochondrial protein kinase PINK1 are associated with autosomal recessive Parkinson disease (PD). We and other groups have reported that PINK1 activates Parkin E3 ligase activity both directly via phosphorylation of Parkin serine 65 (Ser(65))--which lies within its ubiquitin-like domain (Ubl)--and indirectly through phosphorylation of ubiquitin at Ser(65). How Ser(65)-phosphorylated ubiquitin (ubiquitin(Phospho-Ser65)) contributes to Parkin activation is currently unknown. Here, we demonstrate that ubiquitin(Phospho-Ser65) binding to Parkin dramatically increases the rate and stoichiometry of Parkin phosphorylation at Ser(65) by PINK1 in vitro. Analysis of the Parkin structure, corroborated by site-directed mutagenesis, shows that the conserved His302 and Lys151 residues play a critical role in binding of ubiquitin(Phospho-Ser65), thereby promoting Parkin Ser(65) phosphorylation and activation of its E3 ligase activity in vitro. Mutation of His302 markedly inhibits Parkin Ser(65) phosphorylation at the mitochondria, which is associated with a marked reduction in its E3 ligase activity following mitochondrial depolarisation. We show that the binding of ubiquitin(Phospho-Ser65) to Parkin disrupts the interaction between the Ubl domain and C-terminal region, thereby increasing the accessibility of Parkin Ser(65). Finally, purified Parkin maximally phosphorylated at Ser(65) in vitro cannot be further activated by the addition of ubiquitin(Phospho-Ser65). Our results thus suggest that a major role of ubiquitin(Phospho-Ser65) is to promote PINK1-mediated phosphorylation of Parkin at Ser(65), leading to maximal activation of Parkin E3 ligase activity. His302 and Lys151 are likely to line a phospho-Ser(65)-binding pocket on the surface of Parkin that is critical for the ubiquitin(Phospho-Ser65) interaction. This study provides new mechanistic insights into Parkin activation by ubiquitin(Phospho-Ser65), which could aid in the development of Parkin

PINK1 alleviates myocardial hypoxia-reoxygenation injury by ameliorating mitochondrial dysfunction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Yang; Qiu, Liangxian; Liu, Xiping

PTEN inducible kinase-1 (PINK1) mutant induces mitochondrial dysfunction of cells, resulting in an inherited form of Parkinson's disease. However its exact role in the cardiomyocytes is unclear. The present study examined the function of PINK1 in hypoxia-reoxygenation (H/R) induced H9c2 cell damage and its potential mechanism. The H/R model in H9c2 cells was established by 6 h of hypoxia and 12 h of reoxygenation. The CCK8 and LDH assay indicated that the cell viability was obviously reduced after H/R. The expression of PINK1 was decreased in H/R-induced H9c2 cells compared with control group. The vector overexpressing PINK1 was constructed to transfect intomore » H/R-induced H9c2 cells. Our results showed that cell viability was increased, cell apoptosis and caspase 3, cytochrome C (Cyto C) levels were decreased after LV-PINK1 transfection. Furthermore, PINK1 overexpression stabilized electron transport chain (ETC) activity, increased ATP production, mPTP opening and mitochondrial membrane potential (MMP), inhibited ROS-generating mitochondria, implying PINK1 alleviates H/R induced mitochondrial dysfunction in cardiomyocytes. In addition, the TRAP-1 siRNA was transfected into PINK1 treated H9c2 cells after H/R to detected the molecular mechanism of PINK1 protecting cardiomyocytes. The results indicated that silence of TRAP-1 reversed the effects of PINK1 in H/R-induced H9c2 cells. In conclusion, these results suggest that PINK1 overexpression alleviates H/R-induced cell damage of H9c2 cells by phosphorylation of TRAP-1, and that is a valid approach for protection from myocardial I/R injury. - Highlights: • Effects of H/R on cell viability and PINK1 expression in H9c2 cells. • Effects of PINK1 on cell viability in H9c2 cells with H/R model. • Effects of PINK1 on mitochondrial dysfunction in H9c2 cells with H/R model. • PINK1 ameliorates H/R-induced H9c2 cells injury by activating p-TRAP-1.« less

Antidote treatment for cyanide poisoning with hydroxocobalamin causes bright pink discolouration and chemical-analytical interferences.

PubMed

Brunel, C; Widmer, C; Augsburger, M; Dussy, F; Fracasso, T

2012-11-30

Here we report the case of a 70-year-old woman who committed suicide by cyanide poisoning. During resuscitation cares, she underwent an antidote treatment by hydroxocobalamin. Postmortem investigations showed marked bright pink discolouration of organs and fluids, and a lethal cyanide blood concentration of 43 mg/L was detected by toxicological investigation. Discolouration of hypostasis and organs has widely been studied in forensic literature. In our case, we interpreted the unusual pink coloration as the result of the presence of hydroxocobalamin. This substance is a known antidote against cyanide poisoning, indicated because of its efficiency and poor adverse effects. However, its main drawback is to interfere with measurements of many routine biochemical parameters. We have tested the potential influence of this molecule in some routine postmortem investigations. The results are discussed. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.

Field performance of a genetically engineered strain of pink bollworm.

PubMed

Simmons, Gregory S; McKemey, Andrew R; Morrison, Neil I; O'Connell, Sinead; Tabashnik, Bruce E; Claus, John; Fu, Guoliang; Tang, Guolei; Sledge, Mickey; Walker, Adam S; Phillips, Caroline E; Miller, Ernie D; Rose, Robert I; Staten, Robert T; Donnelly, Christl A; Alphey, Luke

2011-01-01

Pest insects harm crops, livestock and human health, either directly or by acting as vectors of disease. The Sterile Insect Technique (SIT)--mass-release of sterile insects to mate with, and thereby control, their wild counterparts--has been used successfully for decades to control several pest species, including pink bollworm, a lepidopteran pest of cotton. Although it has been suggested that genetic engineering of pest insects provides potential improvements, there is uncertainty regarding its impact on their field performance. Discrimination between released and wild moths caught in monitoring traps is essential for estimating wild population levels. To address concerns about the reliability of current marking methods, we developed a genetically engineered strain of pink bollworm with a heritable fluorescent marker, to improve discrimination of sterile from wild moths. Here, we report the results of field trials showing that this engineered strain performed well under field conditions. Our data show that attributes critical to SIT in the field--ability to find a mate and to initiate copulation, as well as dispersal and persistence in the release area--were comparable between the genetically engineered strain and a standard strain. To our knowledge, these represent the first open-field experiments with a genetically engineered insect. The results described here provide encouragement for the genetic control of insect pests.

What Does Daniel Pink Have to Say?

ERIC Educational Resources Information Center

Passmore, Kaye

2007-01-01

In Daniel Pink's vision of the near future, Americans value artists and creative thinkers as much as computer programmers, good design is a necessity, and empathy is essential to all products and services. In this article, the author discusses what Pink, author of "A Whole New Mind: Why Right-Brainers will Rule the Future," has to say on creative…

Parkin and PINK1 functions in oxidative stress and neurodegeneration.

PubMed

Barodia, Sandeep K; Creed, Rose B; Goldberg, Matthew S

2017-07-01

Loss-of-function mutations in the genes encoding Parkin and PINK1 are causally linked to autosomal recessive Parkinson's disease (PD). Parkin, an E3 ubiquitin ligase, and PINK1, a mitochondrial-targeted kinase, function together in a common pathway to remove dysfunctional mitochondria by autophagy. Presumably, deficiency for Parkin or PINK1 impairs mitochondrial autophagy and thereby increases oxidative stress due to the accumulation of dysfunctional mitochondria that release reactive oxygen species. Parkin and PINK1 likely have additional functions that may be relevant to the mechanisms by which mutations in these genes cause neurodegeneration, such as regulating inflammation, apoptosis, or dendritic morphogenesis. Here we briefly review what is known about functions of Parkin and PINK1 related to oxidative stress and neurodegeneration. Copyright © 2016 Elsevier Inc. All rights reserved.

7 CFR 301.52-9 - Movement of live pink bollworms.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 5 2010-01-01 2010-01-01 false Movement of live pink bollworms. 301.52-9 Section 301... Regulations § 301.52-9 Movement of live pink bollworms. Regulations requiring a permit for, and otherwise governing the movement of live pink bollworms in interstate or foreign commerce are contained in the Federal...

Pink Eye (Conjunctivitis)

MedlinePlus

... way to prevent spreading pink eye is to stay home — or keep your child at home — until eye ... re not able to take time off — just stay consistent in practicing good ... present in the mother's birth canal. These bacteria cause no symptoms in ...

Understanding pink eye

USDA-ARS?s Scientific Manuscript database

Pink eye (PE) is a physiological tuber disorder that can result in serious processing complications and storage losses. The earliest external symptoms consist of an ephemeral pinkish discoloration around tuber eyes, predominately at the bud end of the tuber. These pinkish areas can then develop into...

Habitat Suitability Index Models: Pink shrimp

USGS Publications Warehouse

Mulholland, Rosemarie

1984-01-01

Shrimp support the most valuable seafood industry in the United States (Roedel 1973; National Marine Fisheries Service 1983). The three most important commercial species are the white shrimp (Penaeus setiferus L.), brown shrimp (P. aztecus Ives), and pink shrimp (P. duorarum Burkenroad). Adult pink shdmp are caught "in commercial quantities throughout most of the geographic ranqe of the species (L indner 1957), and juveni les support a sizable bait shrimp industry along the Florida coast and throughout the Gulf of Mexico (Saloman 1965).

Pink shrimp as an indicator for restoration of everglades ecosystems

USGS Publications Warehouse

Browder, Joan A.; Robblee, M.B.

2009-01-01

The pink shrimp, Farfantepenaeus duorarum, familiar to most Floridians as either food or bait shrimp, is ubiquitous in South Florida coastal and offshore waters and is proposed as an indicator for assessing restoration of South Florida's southern estuaries: Florida Bay, Biscayne Bay, and the mangrove estuaries of the lower southwest coast. Relationships between pink shrimp and salinity have been determined in both field and laboratory studies. Salinity is directly relevant to restoration because the salinity regimes of South Florida estuaries, critical nursery habitat for the pink shrimp, will be altered by changes in the quantity, timing, and distribution of freshwater inflow planned as part of the Comprehensive Everglades Restoration Project (CERP). Here we suggest performance measures based on pink shrimp density (number per square meter) in the estuaries and propose a restoration assessment and scoring scheme using these performance measures that can readily be communicated to managers, policy makers, and the interested public. The pink shrimp is an appropriate restoration indicator because of its ecological as well as its economic importance and also because scientific interest in pink shrimp in South Florida has produced a wealth of information about the species and relatively long time series of data on both juveniles in estuarine nursery habitats and adults on the fishing grounds. We suggest research needs for improving the pink shrimp performance measure.

Refining the Bengal Fan stratigraphy - A first correlation of IODP Expedition 354 results and seismic data from the Bay of Bengal

NASA Astrophysics Data System (ADS)

Schwenk, Tilmann; Spiess, Volkhard; Bergmann, Fenna; France-Lanord, Christian; Klaus, Adam

2016-04-01

The Bengal Fan covers the floor of the entire Bay of Bengal from the continental margins of India and Bangladesh to the sediment-filled Sunda Trench off Myanmar and the Andaman Islands, and along the west side of the Ninetyeast Ridge. The deposition and progradation of the Bengal Fan started in the Eocene after the collision of India with Asia resulting in the build-up of the Himalaya and the formation of a large proto-Bay of Bengal. Continued convergence of the Indian and Australian plates with the Southeast Asian plate reduced the size of the bay and focused the source of turbidites finally into the present Bengal Basin, Bangladesh shelf, and the shelf canyon "Swatch of no Ground". Today, the Bengal Fan is mainly fed by the sediment load of the Ganges and Brahmaputra rivers, which drain the Himalayas at its southern and northern slope, respectively, and deliver their load to the delta in the Bengal Basin, to the Bengal Shelf and to the deep sea fan. Thus the Bengal Fan is a suitable recorder to study interactions among the growth of the Himalaya and Tibet, the development of the Asian monsoon, and processes affecting the carbon cycle and global climate. Because sedimentation in the Bengal Fan responds to both, climate and tectonic processes, its terrigenous sediment records the past evolution of both the Himalaya and regional climate. This evolution is also expressed in the stratigraphy of the fan in terms of unconformities and key horizons, average sedimentation rates as a function of distance from the basement ridges at 85°E and 90°E and the presence or absence of channel-levee systems. The histories of the Himalaya/Tibetan system and the Asian monsoon require sampling different periods of time with different levels of precision. Therefore IODP Expedition 354 drilled in February-March 2015 a seven site, 320 km-long transect across the Bengal Fan at 8°N. This strategy has been chosen because sediment transport took place by turbidity currents following

PINK1 is degraded through the N-end rule pathway

PubMed Central

Yamano, Koji; Youle, Richard J

2013-01-01

PINK1, a mitochondrial serine/threonine kinase, is the product of a gene mutated in an autosomal recessive form of Parkinson disease. PINK1 is constitutively degraded by an unknown mechanism and stabilized selectively on damaged mitochondria where it can recruit the E3 ligase PARK2/PARKIN to induce mitophagy. Here, we show that, under steady-state conditions, endogenous PINK1 is constitutively and rapidly degraded by E3 ubiquitin ligases UBR1, UBR2 and UBR4 through the N-end rule pathway. Following precursor import into mitochondria, PINK1 is cleaved in the transmembrane segment by a mitochondrial intramembrane protease PARL generating an N-terminal destabilizing amino acid and then retrotranslocates from mitochondria to the cytosol for N-end recognition and proteasomal degradation. Thus, sequential actions of mitochondrial import, PARL-processing, retrotranslocation and recognition by N-end rule E3 enzymes for the ubiquitin proteosomal degradation defines the rapid PINK1 turnover. PINK1 steady-state elimination by the N-end rule identifies a novel organelle to cytoplasm turnover pathway that yields a mechanism to flag damaged mitochondria for autophagic elimination. PMID:24121706

Evidence for size-selective mortality after the first summer of ocean growth by pink salmon

USGS Publications Warehouse

Moss, J.H.; Beauchamp, D.A.; Cross, A.D.; Myers, K.W.; Farley, Edward V.; Murphy, J.M.; Helle, J.H.

2005-01-01

Pink salmon Onchorhynchus gorbuscha with identifiable thermal otolith marks from Prince William Sound hatchery release groups during 2001 were used to test the hypothesis that faster-growing fish during their first summer in the ocean had higher survival rates than slower-growing fish. Marked juvenile pink salmon were sampled monthly in Prince William Sound and the Gulf of Alaska, and adults that survived to maturity were recovered at hatchery release sites the following year. Surviving fish exhibited significantly wider circuli spacing on the region of the scale formed during early marine residence than did juveniles collected at sea during their first ocean summer, indicating that marine survival after the first growing season was related to increases in early marine growth. At the same circuli, a significantly larger average scale radius for returning adults than for juveniles from the same hatchery would suggest that larger, faster-growing juveniles had a higher survival rate and that significant size-selective mortality occurred after the juveniles were sampled. Growth patterns inferred from intercirculi spacing on scales varied among hatchery release groups, suggesting that density-dependent processes differed among release groups and occurred across Prince William Sound and the coastal Gulf of Alaska. These observations support other studies that have found that larger, faster-growing fish are more likely to survive until maturity. ?? Copyright by the American Fisheries Society 2005.

PINK1/Parkin-mediated mitophagy alleviates chlorpyrifos-induced apoptosis in SH-SY5Y cells.

PubMed

Dai, Hongmei; Deng, Yuanying; Zhang, Jie; Han, Hailong; Zhao, Mingyi; Li, Ying; Zhang, Chen; Tian, Jing; Bing, Guoying; Zhao, Lingling

2015-08-06

Chlorpyrifos (CPF) is one of the most widely used organophosphorous insecticides. There are links between CPF exposure and neurological disorders. Mitochondrial damage has been implicated to play a key role in CPF-induced neurotoxicity. Mitophagy, the selective autophagic elimination of mitochondria, is an important mitochondrial quality control mechanism. However, the role of mitophagy in CPF-induced neurotoxicity remains unclear. In this study, CPF-caused mitochondrial damage, role and mechanism of mitophagy on CPF-induced neuroapoptosis were extensively studied by using SH-SY5Y cells. We showed that CPF treatment caused mitochondrial fragmentation, excessive ROS generation and mitochondrial depolarization, thus led to cell apoptosis. Moreover, CPF treatment also resulted in increased colocalizaton of mitochondria with LC3, decreased levels of mitochondrial proteins, PINK1 stabilization and mitochondrial accumulation of Parkin. These data suggested that CPF treatment induced PINK1/Parkin-mediated mitophagy in SH-SY5Y cells. Furthermore, knockdown of Parkin dramatically increased CPF-induced neuroapoptosis. On the other hand, overexpression of Parkin markedly alleviated CPF-induced SH-SY5Y cell apoptosis. Together, these findings implicate a protective role of PINK1/Parkin-mediated mitophagy against neuroapoptosis and that enhancing mitophagy provides a potential therapeutic strategy for CPF-induced neurological disorders. Copyright © 2015 The Authors. Published by Elsevier Ireland Ltd.. All rights reserved.

Who's behind that mask and cape? The Asian leopard cat's Agouti (ASIP) allele likely affects coat colour phenotype in the Bengal cat breed.

PubMed

Gershony, L C; Penedo, M C T; Davis, B W; Murphy, W J; Helps, C R; Lyons, L A

2014-12-01

Coat colours and patterns are highly variable in cats and are determined mainly by several genes with Mendelian inheritance. A 2-bp deletion in agouti signalling protein (ASIP) is associated with melanism in domestic cats. Bengal cats are hybrids between domestic cats and Asian leopard cats (Prionailurus bengalensis), and the charcoal coat colouration/pattern in Bengals presents as a possible incomplete melanism. The complete coding region of ASIP was directly sequenced in Asian leopard, domestic and Bengal cats. Twenty-seven variants were identified between domestic and leopard cats and were investigated in Bengals and Savannahs, a hybrid with servals (Leptailurus serval). The leopard cat ASIP haplotype was distinguished from domestic cat by four synonymous and four non-synonymous exonic SNPs, as well as 19 intronic variants, including a 42-bp deletion in intron 4. Fifty-six of 64 reported charcoal cats were compound heterozygotes at ASIP, with leopard cat agouti (A(P) (be) ) and domestic cat non-agouti (a) haplotypes. Twenty-four Bengals had an additional unique haplotype (A2) for exon 2 that was not identified in leopard cats, servals or jungle cats (Felis chaus). The compound heterozygote state suggests the leopard cat allele, in combination with the recessive non-agouti allele, influences Bengal markings, producing a darker, yet not completely melanistic coat. This is the first validation of a leopard cat allele segregating in the Bengal breed and likely affecting their overall pelage phenotype. Genetic testing services need to be aware of the possible segregation of wild felid alleles in all assays performed on hybrid cats. © 2014 The Authors. Animal Genetics published by John Wiley & Sons Ltd on behalf of Stichting International Foundation for Animal Genetics.

Mitochondrial impairment increases FL-PINK1 levels by calcium-dependent gene expression☆

PubMed Central

Gómez-Sánchez, Rubén; Gegg, Matthew E.; Bravo-San Pedro, José M.; Niso-Santano, Mireia; Alvarez-Erviti, Lydia; Pizarro-Estrella, Elisa; Gutiérrez-Martín, Yolanda; Alvarez-Barrientos, Alberto; Fuentes, José M.; González-Polo, Rosa Ana; Schapira, Anthony H.V.

2014-01-01

Mutations of the PTEN-induced kinase 1 (PINK1) gene are a cause of autosomal recessive Parkinson's disease (PD). This gene encodes a mitochondrial serine/threonine kinase, which is partly localized to mitochondria, and has been shown to play a role in protecting neuronal cells from oxidative stress and cell death, perhaps related to its role in mitochondrial dynamics and mitophagy. In this study, we report that increased mitochondrial PINK1 levels observed in human neuroblastoma SH-SY5Y cells after carbonyl cyanide m-chlorophelyhydrazone (CCCP) treatment were due to de novo protein synthesis, and not just increased stabilization of full length PINK1 (FL-PINK1). PINK1 mRNA levels were significantly increased by 4-fold after 24 h. FL-PINK1 protein levels at this time point were significantly higher than vehicle-treated, or cells treated with CCCP for 3 h, despite mitochondrial content being decreased by 29%. We have also shown that CCCP dissipated the mitochondrial membrane potential (Δψm) and induced entry of extracellular calcium through L/N-type calcium channels. The calcium chelating agent BAPTA-AM impaired the CCCP-induced PINK1 mRNA and protein expression. Furthermore, CCCP treatment activated the transcription factor c-Fos in a calcium-dependent manner. These data indicate that PINK1 expression is significantly increased upon CCCP-induced mitophagy in a calcium-dependent manner. This increase in expression continues after peak Parkin mitochondrial translocation, suggesting a role for PINK1 in mitophagy that is downstream of ubiquitination of mitochondrial substrates. This sensitivity to intracellular calcium levels supports the hypothesis that PINK1 may also play a role in cellular calcium homeostasis and neuroprotection. PMID:24184327

Lead (Pb) induced ATM-dependent mitophagy via PINK1/Parkin pathway.

PubMed

Gu, Xueyan; Qi, Yongmei; Feng, Zengxiu; Ma, Lin; Gao, Ke; Zhang, Yingmei

2018-07-01

Lead (Pb), a widely distributed environmental pollutant, is known to induce mitochondrial damage as well as autophagy in vitro and in vivo. In this study, we found that Pb could trigger mitophagy in both HEK293 cells and the kidney cortex of male Kunming mice. However, whether ataxia telangiectasis mutated (ATM) which is reported to be linked with PTEN-induced putative kinase 1 (PINK1)/Parkin pathway (a well-characterized mitophagic pathway) participates in the regulation of Pb-induced mitophagy and its exact role remains enigmatic. Our results indicated that Pb activated ATM in vitro and in vivo, and further in vitro studies showed that ATM could co-localize with PINK1 and Parkin in cytosol and interact with PINK1. Knockdown of ATM by siRNA blocked Pb-induced mitophagy even under the circumstance of enhanced accumulation of PINK1 and mitochondrial Parkin. Intriguingly, elevation instead of reduction in phosphorylation level of PINK1 and Parkin was observed in response to ATM knockdown and Pb did not contribute to the further increase of their phosphorylation level, implying that ATM indirectly regulated PINK1/Parkin pathway. These findings reveal a novel mechanism for Pb toxicity and suggest the regulatory importance of ATM in PINK1/Parkin-mediated mitophagy. Copyright © 2018 Elsevier B.V. All rights reserved.

Structure of PINK1 in complex with its substrate ubiquitin

PubMed Central

Schubert, Alexander F.; Gladkova, Christina; Pardon, Els; Wagstaff, Jane L.; Freund, Stefan M.V.; Steyaert, Jan; Maslen, Sarah L.; Komander, David

2018-01-01

Autosomal recessive juvenile Parkinsonism (AR-JP) is caused by mutations in a number of PARK genes, in particular in the E3 ubiquitin ligase Parkin (PARK2), and in its upstream protein kinase PINK1 (PARK6). PINK1 phosphorylates ubiquitin and the Parkin ubiquitin-like domain on structurally protected Ser65 to trigger mitophagy. We here report a crystal structure of a nanobody stabilised complex between Pediculus humanus corporis (Ph)PINK1 bound to ubiquitin in the ‘C-terminally retracted’ (Ub-CR) conformation. The structure reveals many peculiarities of PINK1, including the architecture of the C-terminal region, and reveals how the PINK1 N-lobe binds ubiquitin via a unique insertion. The flexible Ser65-loop in the Ub-CR conformation reaches the activation segment, facilitating placement of Ser65 in a phosphate accepting position. The structure also explains how autophosphorylation in the N-lobe stabilises structurally and functionally important insertions, and reveals the molecular basis for AR-JP causing mutations, some of which disrupt ubiquitin binding. PMID:29160309

Structure of PINK1 in complex with its substrate ubiquitin.

PubMed

Schubert, Alexander F; Gladkova, Christina; Pardon, Els; Wagstaff, Jane L; Freund, Stefan M V; Steyaert, Jan; Maslen, Sarah L; Komander, David

2017-12-07

Autosomal-recessive juvenile Parkinsonism (AR-JP) is caused by mutations in a number of PARK genes, in particular the genes encoding the E3 ubiquitin ligase Parkin (PARK2, also known as PRKN) and its upstream protein kinase PINK1 (also known as PARK6). PINK1 phosphorylates both ubiquitin and the ubiquitin-like domain of Parkin on structurally protected Ser65 residues, triggering mitophagy. Here we report a crystal structure of a nanobody-stabilized complex containing Pediculus humanus corporis (Ph)PINK1 bound to ubiquitin in the 'C-terminally retracted' (Ub-CR) conformation. The structure reveals many peculiarities of PINK1, including the architecture of the C-terminal region, and reveals how the N lobe of PINK1 binds ubiquitin via a unique insertion. The flexible Ser65 loop in the Ub-CR conformation contacts the activation segment, facilitating placement of Ser65 in a phosphate-accepting position. The structure also explains how autophosphorylation in the N lobe stabilizes structurally and functionally important insertions, and reveals the molecular basis of AR-JP-causing mutations, some of which disrupt ubiquitin binding.

Migratory routes and at-sea threats to Pink-footed Shearwaters

USGS Publications Warehouse

Adams, Josh; Felis, Jonathan J.; Hodum, Peter; Colodro, Valentina; Carle, Ryan; López, Verónica

2016-01-01

The Pink-footed Shearwater (Ardenna creatopus) is a seabird with a breeding range restricted to three islands in Chile and an estimated world population of approximately 56,000 breeding individuals (Muñoz 2011, Oikonos unpublished data). Due to multiple threats on breeding colonies and at-sea, Pink-footed Shearwaters are listed as Endangered by the government of Chile (Reglamento de Clasificación de Especies, 2011), Threatened by the government of Canada (Environment Canada 2008), and are listed under Appendix 1 of the Agreement on the Conservation of Albatrosses and Petrels (ACAP 2013). A principal conservation concern for the species is mortality from fisheries bycatch during the breeding and non-breeding seasons; thus, identification of areas of overlap between at-sea use by Pink-footed Shearwaters and fisheries is a high priority conservation objective (Hinojosa Sáez and Hodum 1997, Mangel et al. 2013, ACAP 2013). During the non-breeding period, Pink-footed Shearwaters range as far north as Canada, although little was known until recently about migration routes and important wintering areas where fisheries bycatch could be a risk. Additionally, Pink-footed Shearwaters face at-sea threats during the non-breeding season off the west coast of North America. Recently, areas used by wintering Pink-footed Shearwaters have been identified as areas of interest for developing alternative energy offshore in North America (e.g., floating wind generators; Trident Winds 2016). The goal of our study was to track Pink-footed Shearwater post-breeding movements with satellite tags to identify timing and routes of migration, locate important non-breeding foraging habitats, and determine population distribution among different wintering regions.

PINK1 Primes Parkin-Mediated Ubiquitination of PARIS in Dopaminergic Neuronal Survival.

PubMed

Lee, Yunjong; Stevens, Daniel A; Kang, Sung-Ung; Jiang, Haisong; Lee, Yun-Il; Ko, Han Seok; Scarffe, Leslie A; Umanah, George E; Kang, Hojin; Ham, Sangwoo; Kam, Tae-In; Allen, Kathleen; Brahmachari, Saurav; Kim, Jungwoo Wren; Neifert, Stewart; Yun, Seung Pil; Fiesel, Fabienne C; Springer, Wolfdieter; Dawson, Valina L; Shin, Joo-Ho; Dawson, Ted M

2017-01-24

Mutations in PTEN-induced putative kinase 1 (PINK1) and parkin cause autosomal-recessive Parkinson's disease through a common pathway involving mitochondrial quality control. Parkin inactivation leads to accumulation of the parkin interacting substrate (PARIS, ZNF746) that plays an important role in dopamine cell loss through repression of proliferator-activated receptor gamma coactivator-1-alpha (PGC-1α) promoter activity. Here, we show that PARIS links PINK1 and parkin in a common pathway that regulates dopaminergic neuron survival. PINK1 interacts with and phosphorylates serines 322 and 613 of PARIS to control its ubiquitination and clearance by parkin. PINK1 phosphorylation of PARIS alleviates PARIS toxicity, as well as repression of PGC-1α promoter activity. Conditional knockdown of PINK1 in adult mouse brains leads to a progressive loss of dopaminergic neurons in the substantia nigra that is dependent on PARIS. Altogether, these results uncover a function of PINK1 to direct parkin-PARIS-regulated PGC-1α expression and dopaminergic neuronal survival. Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Pink-color sign in esophageal squamous neoplasia, and speculation regarding the underlying mechanism

PubMed Central

Ishihara, Ryu; Kanzaki, Hiromitsu; Iishi, Hiroyasu; Nagai, Kengo; Matsui, Fumi; Yamashina, Takeshi; Matsuura, Noriko; Ito, Takashi; Fujii, Mototsugu; Yamamoto, Sachiko; Hanaoka, Noboru; Takeuchi, Yoji; Higashino, Koji; Uedo, Noriya; Tatsuta, Masaharu; Tomita, Yasuhiko; Ishiguro, Shingo

2013-01-01

AIM: To investigate the reasons for the occurrence of the pink-color sign of iodine-unstained lesions. METHODS: In chromoendoscopy, the pink-color sign of iodine-unstained lesions is recognized as useful for the diagnosis of esophageal squamous cell carcinoma. Patients with superficial esophageal neoplasms treated by endoscopic resection were included in the study. Areas of mucosa with and without the pink-color sign were evaluated histologically. The following histologic features that were possibly associated with the pink-color sign were evaluated. The keratinous layer and basal cell layer were classified as present or absent. Cellular atypia was classified as high grade, moderate grade or low grade, based on nuclear irregularity, mitotic figures, loss of polarity, chromatin pattern and nuclear/cytoplasmic ratio. Vascular change was assessed based on dilatation, tortuosity, caliber change and variability in shape. Vessels with these four findings were classified as positive for vascular change. Endoscopic images of the lesions were captured immediately after iodine staining, 2-3 min after iodine staining and after complete fading of iodine staining. Quantitative analysis of color changes after iodine staining was also performed. RESULTS: A total of 61 superficial esophageal neoplasms in 54 patients were included in the study. The lesions were located in the cervical esophagus in one case, the upper thoracic esophagus in 10 cases, the mid-thoracic esophagus in 33 cases, and the lower thoracic esophagus in 17 cases. The median diameter of the lesions was 20 mm (range: 2-74 mm). Of the 61 lesions, 28 were classified as pink-color sign positive and 33 as pink-color sign negative. The histologic diagnosis was high-grade intraepithelial neoplasia (HGIN) or cancer invading into the lamina propria in 26 of the 28 pink-color sign positive lesions. There was a significant association between pink-color sign positive epithelium and HGIN or invasive cancer (P = 0

Reduction of protein translation and activation of autophagy protect against PINK1 pathogenesis in Drosophila melanogaster.

PubMed

Liu, Song; Lu, Bingwei

2010-12-09

Mutations in PINK1 and Parkin cause familial, early onset Parkinson's disease. In Drosophila melanogaster, PINK1 and Parkin mutants show similar phenotypes, such as swollen and dysfunctional mitochondria, muscle degeneration, energy depletion, and dopaminergic (DA) neuron loss. We previously showed that PINK1 and Parkin genetically interact with the mitochondrial fusion/fission pathway, and PINK1 and Parkin were recently proposed to form a mitochondrial quality control system that involves mitophagy. However, the in vivo relationships among PINK1/Parkin function, mitochondrial fission/fusion, and autophagy remain unclear; and other cellular events critical for PINK1 pathogenesis remain to be identified. Here we show that PINK1 genetically interacted with the protein translation pathway. Enhanced translation through S6K activation significantly exacerbated PINK1 mutant phenotypes, whereas reduction of translation showed suppression. Induction of autophagy by Atg1 overexpression also rescued PINK1 mutant phenotypes, even in the presence of activated S6K. Downregulation of translation and activation of autophagy were already manifested in PINK1 mutant, suggesting that they represent compensatory cellular responses to mitochondrial dysfunction caused by PINK1 inactivation, presumably serving to conserve energy. Interestingly, the enhanced PINK1 mutant phenotype in the presence of activated S6K could be fully rescued by Parkin, apparently in an autophagy-independent manner. Our results reveal complex cellular responses to PINK1 inactivation and suggest novel therapeutic strategies through manipulation of the compensatory responses.

Reduction of Protein Translation and Activation of Autophagy Protect against PINK1 Pathogenesis in Drosophila melanogaster

PubMed Central

Liu, Song; Lu, Bingwei

2010-01-01

Mutations in PINK1 and Parkin cause familial, early onset Parkinson's disease. In Drosophila melanogaster, PINK1 and Parkin mutants show similar phenotypes, such as swollen and dysfunctional mitochondria, muscle degeneration, energy depletion, and dopaminergic (DA) neuron loss. We previously showed that PINK1 and Parkin genetically interact with the mitochondrial fusion/fission pathway, and PINK1 and Parkin were recently proposed to form a mitochondrial quality control system that involves mitophagy. However, the in vivo relationships among PINK1/Parkin function, mitochondrial fission/fusion, and autophagy remain unclear; and other cellular events critical for PINK1 pathogenesis remain to be identified. Here we show that PINK1 genetically interacted with the protein translation pathway. Enhanced translation through S6K activation significantly exacerbated PINK1 mutant phenotypes, whereas reduction of translation showed suppression. Induction of autophagy by Atg1 overexpression also rescued PINK1 mutant phenotypes, even in the presence of activated S6K. Downregulation of translation and activation of autophagy were already manifested in PINK1 mutant, suggesting that they represent compensatory cellular responses to mitochondrial dysfunction caused by PINK1 inactivation, presumably serving to conserve energy. Interestingly, the enhanced PINK1 mutant phenotype in the presence of activated S6K could be fully rescued by Parkin, apparently in an autophagy-independent manner. Our results reveal complex cellular responses to PINK1 inactivation and suggest novel therapeutic strategies through manipulation of the compensatory responses. PMID:21151574

Crust And Upper Mantle Structure Of The Bengal Basin And Bay Of Bengal From Surface Wave Group Velocity Dispersion Studies

NASA Astrophysics Data System (ADS)

Dhali, K. K.; Majhi, S.; Mitra, S.; Priestley, K.

2007-12-01

Fundamental mode Rayleigh and Love wave group velocity dispersion for paths crossing the Bay of Bengal have been calculated for earthquakes in the Indo-Burman arc and the Andaman-Sumatra subduction zone recorded at seismographs in the eastern part of Peninsula India and Sri Lanka. The ray-path coverage in this study provides a better spatial sampling than any previous studies of the region. The individual dispersion curves range from 12 to 70~s and have been clustered in four spatial groups to form average dispersion curves representative of the Bengal basin, northern, central and southern Bay of Bengal. These average dispersion curves for Rayleigh and Love waves are jointly inverted to obtain shear wave velocity structure of the lithosphere. The higher frequencies/shorter periods (12--30~s) used in the inversion constrains the sediment shear wave speed and thickness while the longer periods provide information of the upper mantle structure. The results show a remarkable increase in the sediments thickness along the Bengal Fan from south to north ranging from 6 km, around the southern tip of India, to 23 km beneath the Bengal basin. The shear wave velocity models reveal a sediment saturation beyond 7-10 km of burial leading to metamorphism and eventual increase in velocity to continent like material with depth. The average crustal thickness (loose sediments overlying consolidated sediments followed by metasediments and oceanic crust) is anomalously continental (~20-36 km) rather than being simply oceanic crust overlain by sediments. The average shear wave velocity is about 3.5-3.8 km/s which is more representative of continental crusts. Finally the low velocity zone in the uppermost mantle is possibly an effect of the expected increase in temperature due to blanketing of the fan sediments over the Bay of Bengal crust. The misfits to parts of the dispersion data using a 1D isotropic model provides an indication of the presence of polarization anisotropy in the

7 CFR 301.52-9 - Movement of live pink bollworms.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 5 2012-01-01 2012-01-01 false Movement of live pink bollworms. 301.52-9 Section 301.52-9 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH INSPECTION SERVICE, DEPARTMENT OF AGRICULTURE DOMESTIC QUARANTINE NOTICES Pink Bollworm Quarantine and...

Color Differences Between Pink Veneering Ceramics and the Human Gingiva.

PubMed

Valente, Nicola Alberto; Sailer, Irena; Fehmer, Vincent; Thoma, Daniel Stefan

2018-06-12

The aim of this study was to examine 10 different shades of pink ceramic to determine which one best matches the mean color of human gingiva. Bar-shaped zirconia samples were fabricated and veneered with 1 of 10 pink zirconia veneering ceramics. The color of the gingiva at the central maxillary incisors of 20 healthy volunteers was compared to the pink veneering ceramics using a spectrophotometer (Spectroshade, MHT). The obtained color parameters L*, a*, and b* (CIELAB) of the gingiva and the ceramics were used to calculate the color difference (ΔE). Mean ΔE values were descriptively analyzed and compared to the threshold value for visibility of color differences of gingiva (ΔE = 3.1). The lowest pink ceramic ΔE value obtained (closest to the mean ΔE of all the volunteers' gingiva) was 6.2. All the tested ceramics exhibited a color difference above the threshold value for visibility.

PINK1 deficiency enhances autophagy and mitophagy induction.

PubMed

Gómez-Sánchez, Rubén; Yakhine-Diop, Sokhna M S; Bravo-San Pedro, José M; Pizarro-Estrella, Elisa; Rodríguez-Arribas, Mario; Climent, Vicente; Martin-Cano, Francisco E; González-Soltero, María E; Tandon, Anurag; Fuentes, José M; González-Polo, Rosa A

2016-03-01

Parkinson's disease (PD) is a neurodegenerative disorder with poorly understood etiology. Increasing evidence suggests that age-dependent compromise of the maintenance of mitochondrial function is a key risk factor. Several proteins encoded by PD-related genes are associated with mitochondria including PTEN-induced putative kinase 1 (PINK1), which was first identified as a gene that is upregulated by PTEN. Loss-of-function PINK1 mutations induce mitochondrial dysfunction and, ultimately, neuronal cell death. To mitigate the negative effects of altered cellular functions cells possess a degradation mechanism called autophagy for recycling damaged components; selective elimination of dysfunctional mitochondria by autophagy is termed mitophagy. Our study indicates that autophagy and mitophagy are upregulated in PINK1-deficient cells, and is the first report to demonstrate efficient fluxes by one-step analysis. We propose that autophagy is induced to maintain cellular homeostasis under conditions of non-regulated mitochondrial quality control.

PINK1 deficiency enhances autophagy and mitophagy induction

PubMed Central

Gómez-Sánchez, Rubén; Yakhine-Diop, Sokhna M S; Bravo-San Pedro, José M; Pizarro-Estrella, Elisa; Rodríguez-Arribas, Mario; Climent, Vicente; Martin-Cano, Francisco E; González-Soltero, María E; Tandon, Anurag; Fuentes, José M; González-Polo, Rosa A

2016-01-01

Parkinson's disease (PD) is a neurodegenerative disorder with poorly understood etiology. Increasing evidence suggests that age-dependent compromise of the maintenance of mitochondrial function is a key risk factor. Several proteins encoded by PD-related genes are associated with mitochondria including PTEN-induced putative kinase 1 (PINK1), which was first identified as a gene that is upregulated by PTEN. Loss-of-function PINK1 mutations induce mitochondrial dysfunction and, ultimately, neuronal cell death. To mitigate the negative effects of altered cellular functions cells possess a degradation mechanism called autophagy for recycling damaged components; selective elimination of dysfunctional mitochondria by autophagy is termed mitophagy. Our study indicates that autophagy and mitophagy are upregulated in PINK1-deficient cells, and is the first report to demonstrate efficient fluxes by one-step analysis. We propose that autophagy is induced to maintain cellular homeostasis under conditions of non-regulated mitochondrial quality control. PMID:27308585

Pink Cricket Balls Through Rose-Tinted Glasses: Enhancing Interceptive Timing

PubMed Central

Adie, Joshua M.

2017-01-01

Cricket is a popular but potentially dangerous sport. It is played with a hard ball that can travel at great speeds. Serious injuries, including fatalities, have occurred when balls have struck participants. The game is traditionally played during daylight with a dark red ball, but recent games have been played during the day and at night using a ‘pink’ ball. We have reported data that seemed to justify concerns raised regarding the visibility of these new pink balls, as they were revealed to have a very low luminance contrast against pertinent backgrounds during twilight. Here, we report on the findings of a psychophysical experiment, wherein we mimicked twilight lighting conditions in an interceptive timing experiment using a pink moving disc as an analogue for pink cricket balls. We show that interceptive timing performance is diminished in conditions that mimic twilight. More importantly, we show that wearing glasses with a rose-tinted filter can alleviate this adverse impact by enhancing the luminance contrast of the pink ‘ball’ relative to pertinent backgrounds. PMID:29225767

IR-stimulated visible fluorescence in pink and brown diamond.

PubMed

Byrne, K S; Chapman, J G; Luiten, A N

2014-03-19

Irradiation of natural pink and brown diamond by middle-ultraviolet light (photon energy ϵ ≥ 4.1 eV ) is seen to induce anomalous fluorescence phenomena at N3 defect centres (structure N3-V). When diamonds primed in this fashion are subsequently exposed to infrared light (even with a delay of many hours), a transient burst of blue N3 fluorescence is observed. The dependence of this IR-triggered fluorescence on pump wavelength and intensity suggest that this fluorescence phenomena is intrinsically related to pink diamond photochromism. An energy transfer process between N3 defects and other defect species can account for both the UV-induced fluorescence intensity changes, and the apparent optical upconversion of IR light. From this standpoint, we consider the implications of this N3 fluorescence behaviour for the current understanding of pink diamond photochromism kinetics.

Relating induced in situ conditions of raw chicken breast meat to pinking.

PubMed

Holownia, K; Chinnan, M S; Reynolds, A E; Davis, J W

2004-01-01

Our objective was to simulate the pink color defect in cooked chicken breast meat with treatment combinations that would induce measurable changes in the conditions of raw meat. In addition, the feasibility of using induced raw meat conditions to develop a logistic regression model for prediction of pinking was studied. Approximately 960 breast fillets from 2 plants with 2 replications were used for inducing in situ conditions with 16 combinations of sodium chloride, sodium tripolyphosphate, sodium erythorbate, and sodium nitrite (present and not present). Muscles in all treatments were subjected to individual injections, followed by tumbling, cooking, and chilling. Raw samples were analyzed for pH, oxidation-reduction potential, and pigment evaluation. Results indicated a significant role of induced in situ conditions of raw meat in the occurrence of pinking. Presence of 1 ppm or more of sodium nitrite in raw meat produced significant pinking of cooked meat. The light muscle color group was least affected and the dark group was most affected by induced pH, oxidation-reduction potential conditions, and metmyoglobin and nitrosopigment content. The predictive ability of the logistic model was more than 90% with nitrosopigment, pH, and reducing conditions being the most important factors. Moreover, validation of the model was confirmed by close association between observed pink samples and those predicted as pink.

The Ubiquitination of PINK1 Is Restricted to Its Mature 52-kDa Form.

PubMed

Liu, Yuhui; Guardia-Laguarta, Cristina; Yin, Jiang; Erdjument-Bromage, Hediye; Martin, Brittany; James, Michael; Jiang, Xuejun; Przedborski, Serge

2017-07-05

Along with Parkin, PINK1 plays a critical role in maintaining mitochondrial quality control. Although PINK1 is expressed constitutively, its level is kept low in healthy mitochondria by polyubiquitination and ensuing proteasomal degradation of its mature, 52 kDa, form. We show here that the target of PINK1 polyubiquitination is the mature form and is mediated by ubiquitination of a conserved lysine at position 137. Notably, the full-length protein also contains Lys-137 but is not ubiquitinated. On the basis of our data, we propose that cleavage of full-length PINK1 at Phe-104 disrupts the major hydrophobic membrane-spanning domain in the protein, inducing a conformation change in the resultant mature form that exposes Lys-137 to the cytosol for subsequent modification by the ubiquitination machinery. Thus, the balance between the full-length and mature PINK1 allows its levels to be regulated via ubiquitination of the mature form and ensures that PINK1 functions as a mitochondrial quality control factor. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Prevention of cataracts in pink-eyed RCS rats by dark rearing.

PubMed

O'Keefe, T L; Hess, H H; Zigler, J S; Kuwabara, T; Knapka, J J

1990-11-01

Royal College of Surgeons rats have hereditary retinal degeneration and associated posterior subcapsular opacities (PSO) of the lens, detectable by slitlamp at 7-8 postnatal weeks in both pink- and black-eyed rats. The retinal degeneration is intensified by light, especially in pink-eyed rats. A fourth of pink-eyed rats developed mature cataracts by 9-12 months of age, but black-eyed rats whose retinas are protected from light by pigmented irises and pigment epithelium rarely have mature cataracts (3% or less), indicating light may be a factor in cataractogenesis. Prior work had shown that dark rearing reduced the rate of retinal degeneration in pink- but not black-eyed rats, but cataracts were not studied. In the present work, pregnant pink-eyed females were placed in a darkroom 1 week before parturition. Pups were removed over intervals at 20-85 postnatal days for: (a) microscopic study of fresh lenses and of fixed, stained retina and lens, and (b) counts of cells mm-2 of the web-like vitreous cortex after it had been dissected free. The macrophage-like cells are a quantitative index of immune reaction to retinal damage. At 50-53 postnatal days, in pink-eyed cyclic light reared RCS, the mean number of macrophages was 4.6-fold that in congenic controls, but in those that were dark reared it was only 1.4-fold. This was less than the increase in cyclic light reared black-eyed RCS (2.3-fold that in congenic black-eyed controls). Total absence of light reduced retinal degeneration and the number of macrophages, and prevented PSO detectable microscopically.(ABSTRACT TRUNCATED AT 250 WORDS)

A zebrafish model of PINK1 deficiency reveals key pathway dysfunction including HIF signaling.

PubMed

Priyadarshini, M; Tuimala, J; Chen, Y C; Panula, P

2013-06-01

The PTEN induced putative kinase 1 (PINK1) gene is mutated in patients with hereditary early onset Parkinson's disease (PD). The targets of PINK1 and the mechanisms in PD are still not fully understood. Here, we carried out a high-throughput and unbiased microarray study to identify novel functions and pathways for PINK1. In larval zebrafish, the function of pink1 was inhibited using splice-site morpholino oligonucleotides and the samples were hybridized on a two-color gene expression array. We found 177 significantly altered genes in pink1 morphants compared with the uninjected wildtype controls (log fold change values from -1.6 to +0.9). The five most prominent pathways based on critical biological processes and key toxicological responses were hypoxia-inducible factor (HIF) signaling, TGF-β signaling, mitochondrial dysfunction, RAR activation, and biogenesis of mitochondria. Furthermore, we verified that potentially important genes such as hif1α, catalase, SOD3, and atp1a2a were downregulated in pink1 morphants, whereas genes such as fech, pax2a, and notch1a were upregulated. Some of these genes have been found to play important roles in HIF signaling pathways. The pink1 morphants were found to have heart dysfunction, increased erythropoiesis, increased expression of vascular endothelial growth factors, and increased ROS. Our findings suggest that a lack of pink1 in zebrafish alters many vital and critical pathways in addition to the HIF signaling pathway. Copyright © 2013 Elsevier Inc. All rights reserved.

Evaluation of induced color changes in chicken breast meat during simulation of pink color defect.

PubMed

Holownia, K; Chinnan, M S; Reynolds, A E; Koehler, P E

2003-06-01

The objective of the study was to establish a pink threshold and simulate the pink defect in cooked chicken breast meat with treatment combinations that would induce significant changes in the color of raw and cooked meat. The subjective pink threshold used in judging pink discoloration was established at a* = 3.8. Samples of three color groups (normal, lighter than normal, and darker than normal) of boneless, skinless chicken breast muscles were selected based on instrumental color values. The in situ changes were induced using sodium chloride, sodium tripolyphosphate, sodium erythorbate, and sodium nitrite at two levels: present and not present. Fillets in all treatments were subjected to individual injections, followed by tumbling, cooking, and chilling. Samples were analyzed for color [lightness (L*), red/green axis (a*), yellow/blue axis (b*)] and reflectance spectra. Simulation of the pink defect was achieved in eight of the 16 treatment combinations when sodium nitrite was present and in an additional two treatment combinations when it was absent. Pinking in cooked samples was affected (P < 0.05) by L* of raw meat color. Results confirmed that it was possible to simulate the undesired pinking in cooked chicken white meat when in situ conditions were induced by sodium chloride, sodium tripolyphosphate, and sodium nitrite. The continuation of the simulation study can aid in developing alternative processing methods to eliminate potential pink defects.

Paradoxical darkening and removal of pink tattoo ink.

PubMed

Kirby, William; Kaur, Ravneet Ruby; Desai, Alpesh

2010-06-01

It is widely accepted that Q-switched lasers are the gold-standard treatment for the resolution of unwanted tattoo ink. Although much safer than other tattoo removal modalities, the treatment of tattoo ink with Q-switched devices may be associated with long-term adverse effects including undesired pigmentary alterations such as tattoo ink darkening. Darkening of tattoo ink is most often reported in cosmetic, flesh-toned, white, peach, and pink tattoos. In this paper, we briefly review a case of pink tattoo ink that initially darkened paradoxically but eventually resolved with continued Q-switched laser treatments.

Mycoplasma and associated bacteria isolated from ovine pink-eye.

PubMed

Langford, E V

1971-01-01

A mycoplasma was recovered from the untreated conjunctival membranes of nine sheep affected by Pink-eye. It was neither isolated from the conjunctiva of treated animals which were affected nor from the conjunctiva of normal animals either in contact or not in contact with affected animals. Bacteria found on normal conjunctival membranes were Neisseria ovis, Escherichia coli, Staphylococcus epidermididis, Streptococcus and Bacillus spp. Bacteria found in clinical cases of Pink-eye were N. ovis, E. coli, a Streptococcus and Pseudomonas spp.

PINK1 is required for timely cell-type specific mitochondrial clearance during Drosophila midgut metamorphosis.

PubMed

Liu, Yan; Lin, Jingjing; Zhang, Minjie; Chen, Kai; Yang, Shengxi; Wang, Qun; Yang, Hongqin; Xie, Shusen; Zhou, Yongjian; Zhang, Xi; Chen, Fei; Yang, Yufeng

2016-11-15

Mitophagy is the selective degradation of mitochondria by autophagy, which is an important mitochondrial quality and quantity control process. During Drosophila metamorphosis, the degradation of midgut involves a large change in length and organization, which is mediated by autophagy. Here we noticed a cell-type specific mitochondrial clearance process that occurs in enterocytes (ECs), while most mitochondria remain in intestinal stem cells (ISCs) during metamorphosis. Although PINK1/PARKIN represent the canonical pathway for the elimination of impaired mitochondria in varied pathological conditions, their roles in developmental processes or normal physiological conditions have been less studied. To examine the potential contribution of PINK1 in developmental processes, we monitored the dynamic expression pattern of PINK1 in the midgut development by taking advantage of a newly CRISPR/Cas9 generated knock-in fly strain expressing PINK1-mCherry fusion protein that presumably recapitulates the endogenous expression pattern of PINK1. We disclosed a spatiotemporal correlation between the expression pattern of PINK1 and the mitochondrial clearance or persistence in ECs or ISCs respectively. By mosaic genetic analysis, we then demonstrated that PINK1 and PARKIN function epistatically to mediate the specific timely removal of mitochondria, and are involved in global autophagy in ECs during Drosophila midgut metamorphosis, with kinase-dead PINK1 exerting dominant negative effects. Taken together, our studies concluded that the PINK1/PARKIN is crucial for timely cell-type specific mitophagy under physiological conditions and demonstrated again that Drosophila midgut metamorphosis might serve as an elegant in vivo model to study autophagy. Copyright © 2016 Elsevier Inc. All rights reserved.

Shades of Pink: Preschoolers Make Meaning in a Reggio-Inspired Classroom

ERIC Educational Resources Information Center

Kim, Bo Sun

2012-01-01

Shades of Pink study describes how six preschoolers and their teacher engaged in a collaborative learning project through which they learned about the shades of a color--in this case, pink. As the children learned through experimenting and discussing their theories, they represented ideas using art as a tool for discovery and learning. The study…

Mucin characteristics of human corneal-limbal epithelial cells that exclude the rose bengal anionic dye.

PubMed

Argüeso, Pablo; Tisdale, Ann; Spurr-Michaud, Sandra; Sumiyoshi, Mika; Gipson, Ilene K

2006-01-01

Rose bengal is an organic anionic dye used to assess damage of the ocular surface epithelium in ocular surface disease. It has been proposed that mucins have a protective role, preventing rose bengal staining of normal ocular surface epithelial cells. The current study was undertaken to evaluate rose bengal staining in a human corneal-limbal epithelial (HCLE) cell line known to produce and glycosylate membrane-associated mucins. HCLE cells were grown to confluence in serum-free medium and switched to DMEM/F12 with 10% serum to promote differentiation. Immunolocalization of the membrane-associated mucins MUC1 and MUC16 and the T-antigen carbohydrate epitope was performed with the monoclonal antibodies HMFG-2 and OC125 and jacalin lectin, respectively. To assess dye uptake, cultures were incubated for 5 minutes with 0.1% rose bengal and photographed. To determine whether exclusion of negatively charged rose bengal requires a negative charge at the cell surface, cells were incubated with fluoresceinated cationized ferritin. The effect of hyperosmotic stress on rose bengal staining in vitro was evaluated by increasing the ion concentration (Ca+2 and Mg+2) in the rose bengal uptake assay. The cytoplasm and nucleus of confluent HCLE cells cultured in media without serum, lacking the expression of MUC16 but not MUC1, as well as human corneal fibroblasts, which do not express mucins, stained with rose bengal. Culture of HCLE cells in medium containing serum resulted in the formation of islands of stratified cells that excluded rose bengal. Apical cells of the stratified islands produced MUC16 and the T-antigen carbohydrate epitope on their apical surfaces. Colocalization experiments demonstrated that fluoresceinated cationized ferritin did not bind to these stratified cells, indicating that rose bengal is excluded from cells that lack negative charges. Increasing the amounts of divalent cations in the media reduced the cellular area protected against rose bengal uptake

Increase in the Intensity of Postmonsoon Bay of Bengal Tropical Cyclones

DOE Office of Scientific and Technical Information (OSTI.GOV)

Balaguru, Karthik; Taraphdar, Sourav; Leung, Lai-Yung R.

2014-05-28

The post-monsoon (October-November) tropical cyclone (TC) season in the Bay of Bengal has spawned many of the deadliest storms in recorded history. Here it is shown that the intensity of post-monsoon Bay of Bengal TCs, and the contribution of major TCs to total TC power, increased during 1981-2010. It is found that changes in environmental parameters are responsible for the observed increases in TC intensity. Increases in sea surface temperature and upper ocean heat content made the ocean more conducive to TC development, while enhanced convective instability made the atmosphere more favorable for the growth of TCs. The largest changesmore » in the atmosphere and ocean occurred in the eastern Bay of Bengal, where nearly all major TCs form. These changes are part of positive linear trends, suggesting that the intensity of post-monsoon Bay of Bengal TCs may continue to increase in the future.« less

PINK1 Is a Negative Regulator of Growth and the Warburg Effect in Glioblastoma.

PubMed

Agnihotri, Sameer; Golbourn, Brian; Huang, Xi; Remke, Marc; Younger, Susan; Cairns, Rob A; Chalil, Alan; Smith, Christian A; Krumholtz, Stacey-Lynn; Mackenzie, Danielle; Rakopoulos, Patricia; Ramaswamy, Vijay; Taccone, Michael S; Mischel, Paul S; Fuller, Gregory N; Hawkins, Cynthia; Stanford, William L; Taylor, Michael D; Zadeh, Gelareh; Rutka, James T

2016-08-15

Proliferating cancer cells are characterized by high rates of glycolysis, lactate production, and altered mitochondrial metabolism. This metabolic reprogramming provides important metabolites for proliferation of tumor cells, including glioblastoma. These biological processes, however, generate oxidative stress that must be balanced through detoxification of reactive oxygen species (ROS). Using an unbiased retroviral loss-of-function screen in nontransformed human astrocytes, we demonstrate that mitochondrial PTEN-induced kinase 1 (PINK1) is a regulator of the Warburg effect and negative regulator of glioblastoma growth. We report that loss of PINK1 contributes to the Warburg effect through ROS-dependent stabilization of hypoxia-inducible factor-1A and reduced pyruvate kinase muscle isozyme 2 activity, both key regulators of aerobic glycolysis. Mechanistically, PINK1 suppresses ROS and tumor growth through FOXO3a, a master regulator of oxidative stress and superoxide dismutase 2. These findings highlight the importance of PINK1 and ROS balance in normal and tumor cells. PINK1 loss was observed in a significant number of human brain tumors including glioblastoma (n > 900) and correlated with poor patient survival. PINK1 overexpression attenuates in vivo glioblastoma growth in orthotopic mouse xenograft models and a transgenic glioblastoma model in Drosophila Cancer Res; 76(16); 4708-19. ©2016 AACR. ©2016 American Association for Cancer Research.

Transhemispheric ecosystem disservices of pink salmon in a Pacific Ocean macrosystem.

PubMed

Springer, Alan M; van Vliet, Gus B; Bool, Natalie; Crowley, Mike; Fullagar, Peter; Lea, Mary-Anne; Monash, Ross; Price, Cassandra; Vertigan, Caitlin; Woehler, Eric J

2018-05-29

Pink salmon ( Oncorhynchus gorbuscha ) in the North Pacific Ocean have flourished since the 1970s, with growth in wild populations augmented by rising hatchery production. As their abundance has grown, so too has evidence that they are having important effects on other species and on ocean ecosystems. In alternating years of high abundance, they can initiate pelagic trophic cascades in the northern North Pacific Ocean and Bering Sea and depress the availability of common prey resources of other species of salmon, resident seabirds, and other pelagic species. We now propose that the geographic scale of ecosystem disservices of pink salmon is far greater due to a 15,000-kilometer transhemispheric teleconnection in a Pacific Ocean macrosystem maintained by short-tailed shearwaters ( Ardenna tenuirostris ), seabirds that migrate annually between their nesting grounds in the South Pacific Ocean and wintering grounds in the North Pacific Ocean. Over this century, the frequency and magnitude of mass mortalities of shearwaters as they arrive in Australia, and their abundance and productivity, have been related to the abundance of pink salmon. This has influenced human social, economic, and cultural traditions there, and has the potential to alter the role shearwaters play in insular terrestrial ecology. We can view the unique biennial pulses of pink salmon as a large, replicated, natural experiment that offers basin-scale opportunities to better learn how these ecosystems function. By exploring trophic interaction chains driven by pink salmon, we may achieve a deeper conservation conscientiousness for these northern open oceans.

PINK1-Mediated Phosphorylation of Parkin Boosts Parkin Activity in Drosophila

PubMed Central

Shiba-Fukushima, Kahori; Inoshita, Tsuyoshi; Hattori, Nobutaka; Imai, Yuzuru

2014-01-01

Two genes linked to early onset Parkinson's disease, PINK1 and Parkin, encode a protein kinase and a ubiquitin-ligase, respectively. Both enzymes have been suggested to support mitochondrial quality control. We have reported that Parkin is phosphorylated at Ser65 within the ubiquitin-like domain by PINK1 in mammalian cultured cells. However, it remains unclear whether Parkin phosphorylation is involved in mitochondrial maintenance and activity of dopaminergic neurons in vivo. Here, we examined the effects of Parkin phosphorylation in Drosophila, in which the phosphorylation residue is conserved at Ser94. Morphological changes of mitochondria caused by the ectopic expression of wild-type Parkin in muscle tissue and brain dopaminergic neurons disappeared in the absence of PINK1. In contrast, phosphomimetic Parkin accelerated mitochondrial fragmentation or aggregation and the degradation of mitochondrial proteins regardless of PINK1 activity, suggesting that the phosphorylation of Parkin boosts its ubiquitin-ligase activity. A non-phosphorylated form of Parkin fully rescued the muscular mitochondrial degeneration due to the loss of PINK1 activity, whereas the introduction of the non-phosphorylated Parkin mutant in Parkin-null flies led to the emergence of abnormally fused mitochondria in the muscle tissue. Manipulating the Parkin phosphorylation status affected spontaneous dopamine release in the nerve terminals of dopaminergic neurons, the survivability of dopaminergic neurons and flight activity. Our data reveal that Parkin phosphorylation regulates not only mitochondrial function but also the neuronal activity of dopaminergic neurons in vivo, suggesting that the appropriate regulation of Parkin phosphorylation is important for muscular and dopaminergic functions. PMID:24901221

Phosphorylation of Mitochondrial Polyubiquitin by PINK1 Promotes Parkin Mitochondrial Tethering

PubMed Central

Shiba-Fukushima, Kahori; Arano, Taku; Matsumoto, Gen; Inoshita, Tsuyoshi; Yoshida, Shigeharu; Ishihama, Yasushi; Ryu, Kwon-Yul; Nukina, Nobuyuki; Hattori, Nobutaka; Imai, Yuzuru

2014-01-01

The kinase PINK1 and the E3 ubiquitin (Ub) ligase Parkin participate in mitochondrial quality control. The phosphorylation of Ser65 in Parkin's ubiquitin-like (UBl) domain by PINK1 stimulates Parkin activation and translocation to damaged mitochondria, which induces mitophagy generating polyUb chain. However, Parkin Ser65 phosphorylation is insufficient for Parkin mitochondrial translocation. Here we report that Ser65 in polyUb chain is also phosphorylated by PINK1, and that phosphorylated polyUb chain on mitochondria tethers Parkin at mitochondria. The expression of Tom70MTS-4xUb SE, which mimics phospho-Ser65 polyUb chains on the mitochondria, activated Parkin E3 activity and its mitochondrial translocation. An E3-dead form of Parkin translocated to mitochondria with reduced membrane potential in the presence of Tom70MTS-4xUb SE, whereas non-phospho-polyUb mutant Tom70MTS-4xUb SA abrogated Parkin translocation. Parkin binds to the phospho-polyUb chain through its RING1-In-Between-RING (IBR) domains, but its RING0-linker is also required for mitochondrial translocation. Moreover, the expression of Tom70MTS-4xUb SE improved mitochondrial degeneration in PINK1-deficient, but not Parkin-deficient, Drosophila. Our study suggests that the phosphorylation of mitochondrial polyUb by PINK1 is implicated in both Parkin activation and mitochondrial translocation, predicting a chain reaction mechanism of mitochondrial phospho-polyUb production by which rapid translocation of Parkin is achieved. PMID:25474007

Evidence of Neurobiological Changes in the Presymptomatic PINK1 Knockout Rat.

PubMed

Ferris, Craig F; Morrison, Thomas R; Iriah, Sade; Malmberg, Samantha; Kulkarni, Praveen; Hartner, Jochen C; Trivedi, Malav

2018-01-01

Genetic models of Parkinson's disease (PD) coupled with advanced imaging techniques can elucidate neurobiological disease progression, and can help identify early biomarkers before clinical signs emerge. PTEN-induced putative kinase 1 (PINK1) helps protect neurons from mitochondrial dysfunction, and a mutation in the associated gene is a risk factor for recessive familial PD. The PINK1 knockout (KO) rat is a novel model for familial PD that has not been neuroradiologically characterized for alterations in brain structure/function, alongside behavior, prior to 4 months of age. To identify biomarkers of presymptomatic PD in the PINK1 -/- rat at 3 months using magnetic resonance imaging techniques. At postnatal weeks 12-13; one month earlier than previously reported signs of motor and cognitive dysfunction, this study combined imaging modalities, including assessment of quantitative anisotropy across 171 individual brain areas using an annotated MRI rat brain atlas to identify sites of gray matter alteration between wild-type and PINK1 -/- rats. The olfactory system, hypothalamus, thalamus, nucleus accumbens, and cerebellum showed differences in anisotropy between experimental groups. Molecular analyses revealed reduced levels of glutathione, ATP, and elevated oxidative stress in the substantia nigra, striatum and deep cerebellar nuclei. Mitochondrial genes encoding proteins in Complex IV, along with mRNA levels associated with mitochondrial function and genes involved in glutathione synthesis were reduced. Differences in brain structure did not align with any cognitive or motor impairment. These data reveal early markers, and highlight novel brain regions involved in the pathology of PD in the PINK1 -/- rat before behavioral dysfunction occurs.

Mucin Characteristics of Human Corneal-Limbal Epithelial Cells that Exclude the Rose Bengal Anionic Dye

PubMed Central

Argüeso, Pablo; Tisdale, Ann; Spurr-Michaud, Sandra; Sumiyoshi, Mika; Gipson, Ilene K.

2005-01-01

Purpose Rose bengal is an organic anionic dye used to assess damage of the ocular surface epithelium in ocular surface disease. It has been proposed that mucins have a protective role, preventing rose bengal staining of normal ocular surface epithelial cells. The current study was undertaken to evaluate rose bengal staining in a human corneal-limbal epithelial (HCLE) cell line known to produce and glycosylate membrane-associated mucins. Methods HCLE cells were grown to confluence in serum-free medium and switched to DMEM/F12 with 10% serum to promote differentiation. Immunolocalization of the membrane-associated mucins MUC1 and MUC16 and the T-antigen carbohydrate epitope was performed with the monoclonal antibodies HMFG-2 and OC125 and jacalin lectin, respectively. To assess dye uptake, cultures were incubated for 5 minutes with 0.1% rose bengal and photographed. To determine whether exclusion of negatively charged rose bengal requires a negative charge at the cell surface, cells were incubated with fluoresceinated cationized ferritin. The effect of hyperosmotic stress on rose bengal staining in vitro was evaluated by increasing the ion concentration (Ca+2 and Mg+2) in the rose bengal uptake assay. Results The cytoplasm and nucleus of confluent HCLE cells cultured in media without serum, lacking the expression of MUC16 but not MUC1, as well as human corneal fibroblasts, which do not express mucins, stained with rose bengal. Culture of HCLE cells in medium containing serum resulted in the formation of islands of stratified cells that excluded rose bengal. Apical cells of the stratified islands produced MUC16 and the T-antigen carbohydrate epitope on their apical surfaces. Colocalization experiments demonstrated that fluoresceinated cationized ferritin did not bind to these stratified cells, indicating that rose bengal is excluded from cells that lack negative charges. Increasing the amounts of divalent cations in the media reduced the cellular area protected

The PINK1 p.I368N mutation affects protein stability and ubiquitin kinase activity.

PubMed

Ando, Maya; Fiesel, Fabienne C; Hudec, Roman; Caulfield, Thomas R; Ogaki, Kotaro; Górka-Skoczylas, Paulina; Koziorowski, Dariusz; Friedman, Andrzej; Chen, Li; Dawson, Valina L; Dawson, Ted M; Bu, Guojun; Ross, Owen A; Wszolek, Zbigniew K; Springer, Wolfdieter

2017-04-24

Mutations in PINK1 and PARKIN are the most common causes of recessive early-onset Parkinson's disease (EOPD). Together, the mitochondrial ubiquitin (Ub) kinase PINK1 and the cytosolic E3 Ub ligase PARKIN direct a complex regulated, sequential mitochondrial quality control. Thereby, damaged mitochondria are identified and targeted to degradation in order to prevent their accumulation and eventually cell death. Homozygous or compound heterozygous loss of either gene function disrupts this protective pathway, though at different steps and by distinct mechanisms. While structure and function of PARKIN variants have been well studied, PINK1 mutations remain poorly characterized, in particular under endogenous conditions. A better understanding of the exact molecular pathogenic mechanisms underlying the pathogenicity is crucial for rational drug design in the future. Here, we characterized the pathogenicity of the PINK1 p.I368N mutation on the clinical and genetic as well as on the structural and functional level in patients' fibroblasts and in cell-based, biochemical assays. Under endogenous conditions, PINK1 p.I368N is expressed, imported, and N-terminally processed in healthy mitochondria similar to PINK1 wild type (WT). Upon mitochondrial damage, however, full-length PINK1 p.I368N is not sufficiently stabilized on the outer mitochondrial membrane (OMM) resulting in loss of mitochondrial quality control. We found that binding of PINK1 p.I368N to the co-chaperone complex HSP90/CDC37 is reduced and stress-induced interaction with TOM40 of the mitochondrial protein import machinery is abolished. Analysis of a structural PINK1 p.I368N model additionally suggested impairments of Ub kinase activity as the ATP-binding pocket was found deformed and the substrate Ub was slightly misaligned within the active site of the kinase. Functional assays confirmed the lack of Ub kinase activity. Here we demonstrated that mutant PINK1 p.I368N can not be stabilized on the OMM upon

Cationic Phosphorus Dendrimer Enhances Photodynamic Activity of Rose Bengal against Basal Cell Carcinoma Cell Lines.

PubMed

Dabrzalska, Monika; Janaszewska, Anna; Zablocka, Maria; Mignani, Serge; Majoral, Jean Pierre; Klajnert-Maculewicz, Barbara

2017-05-01

In the last couple of decades, photodynamic therapy emerged as a useful tool in the treatment of basal cell carcinoma. However, it still meets limitations due to unfavorable properties of photosensitizers such as poor solubility or lack of selectivity. Dendrimers, polymers widely studied in biomedical field, may play a role as photosensitizer carriers and improve the efficacy of photodynamic treatment. Here, we describe the evaluation of an electrostatic complex of cationic phosphorus dendrimer and rose bengal in such aspects as singlet oxygen production, cellular uptake, and phototoxicity against three basal cell carcinoma cell lines. Rose bengal-cationic dendrimer complex in molar ratio 5:1 was compared to free rose bengal. Obtained results showed that the singlet oxygen production in aqueous medium was significantly higher for the complex than for free rose bengal. The cellular uptake of the complex was 2-7-fold higher compared to a free photosensitizer. Importantly, rose bengal, rose bengal-dendrimer complex, and dendrimer itself showed no dark toxicity against all three cell lines. Moreover, we observed that phototoxicity of the complex was remarkably enhanced presumably due to high cellular uptake. On the basis of the obtained results, we conclude that rose bengal-cationic dendrimer complex has a potential in photodynamic treatment of basal cell carcinoma.

Allium discoloration: precursors involved in onion pinking and garlic greening.

PubMed

Kubec, Roman; Hrbácová, Marcela; Musah, Rabi A; Velísek, Jan

2004-08-11

Precursors involved in the formation of pink and green-blue pigments generated during onion and garlic processing, respectively, have been studied. It has been confirmed that the formations of both pigments are of very similar natures, with (E)-S-(1-propenyl)cysteine sulfoxide (isoalliin) serving as the primary precursor. Upon disruption of the tissue, isoalliin and other S-alk(en)ylcysteine sulfoxides are enzymatically cleaved, yielding 1-propenyl-containing thiosulfinates [CH3CH=CHS(O)SR; R = methyl, allyl, propyl, 1-propenyl] among others. The latter compounds have been shown to subsequently react with amino acids to produce the pigments. Whereas the propyl, 1-propenyl, and methyl derivatives form pink, pink-red, and magenta compounds, those containing the allyl group give rise to blue products after reacting with glycine at pH 5.0. The role of other thiosulfinates [RS(O)SR'] (R, R' = methyl, allyl, propyl) and (Z)-thiopropanal S-oxide (the onion lachrymatory principle) in the formation of the pigments is also discussed.

Regional-Scale Declines in Productivity of Pink and Chum Salmon Stocks in Western North America

PubMed Central

Malick, Michael J.; Cox, Sean P.

2016-01-01

Sockeye salmon (Oncorhynchus nerka) stocks throughout the southern part of their North American range have experienced declines in productivity over the past two decades. In this study, we tested the hypothesis that pink (O. gorbuscha) and chum (O. keta) salmon stocks have also experienced recent declines in productivity by investigating temporal and spatial trends in productivity of 99 wild North American pink and chum salmon stocks. We used a combination of population dynamics and time series models to quantify individual stock trends as well as common temporal trends in pink and chum salmon productivity across local, regional, and continental spatial scales. Our results indicated widespread declines in productivity of wild chum salmon stocks throughout Washington (WA) and British Columbia (BC) with 81% of stocks showing recent declines in productivity, although the exact form of the trends varied among regions. For pink salmon, the majority of stocks in WA and BC (65%) did not have strong temporal trends in productivity; however, all stocks that did have trends in productivity showed declining productivity since at least brood year 1996. We found weaker evidence of widespread declines in productivity for Alaska pink and chum salmon, with some regions and stocks showing declines in productivity (e.g., Kodiak chum salmon stocks) and others showing increases (e.g., Alaska Peninsula pink salmon stocks). We also found strong positive covariation between stock productivity series at the regional spatial scale for both pink and chum salmon, along with evidence that this regional-scale positive covariation has become stronger since the early 1990s in WA and BC. In general, our results suggest that common processes operating at the regional or multi-regional spatial scales drive productivity of pink and chum salmon stocks in western North America and that the effects of these process on productivity may change over time. PMID:26760510

Development and testing of monoclonal antibody-based rapid immunodiagnostic test kits for direct detection of Vibrio cholerae O139 synonym Bengal.

PubMed

Hasan, J A; Huq, A; Nair, G B; Garg, S; Mukhopadhyay, A K; Loomis, L; Bernstein, D; Colwell, R R

1995-11-01

We report on the development and testing of two monoclonal antibody-based rapid immunodiagnostic test kits, BengalScreen, a coagglutination test, and Bengal DFA, a direct fluorescent-antibody test, for direct detection of Vibrio cholerae O139 synonym Bengal in clinical and environmental specimens. The BengalScreen test requires less than 5 min to complete and can be used in the field. Bengal DFA, being more sensitive than BengalScreen, requires only one reagent and less than 20 min for detection and enumeration of V. cholerae O139 synonym Bengal. In tests for specificity, all 40 strains of V. cholerae O139 reacted with both test kits, whereas 157 strains of heterologous species examined did not, yielding 100% specificity in this study. A field trial was conducted in with both BengalScreen and Bengal DFA, and the results were compared with those obtained by conventional culture methods. BengalScreen demonstrated a sensitivity of 95%, a specificity of 100%, a positive predictive value of 100%, and a negative predictive value of 94%. Results obtained by Bengal DFA, on the other hand, were 100% sensitive and 100% specific and yielded 100% positive and negative predictive values compared with culture methods. In a second evaluation, 93 stool specimens from Mexico that were negative for V. cholerae O139 by culture were also tested with both the BengalScreen and Bengal DFA kits. None of the 93 specimens were positive for V. cholerae O139 by both tests. A concentration method was optimized for screening of environmental water samples for V. cholerae O139 synonym Bengal with rapid test kits. BengalScreen results were unequivocally positive when water samples contained at least 2.0 x 10(3) CFU/ml, whereas Bengal DFA demonstrated an unequivocally positive reaction when the water sample contained at least 1.5 x 10(2) CFU/ml. When Bengal DFA was compared with conventional culture methods for enumeration of V. cholerae O139 synonym Bengal organisms, no difference was observed.

Characterization of Rose Bengal binding to sinusoidal and bile canalicular plasma membrane from rat liver.

PubMed

Yachi, K; Sugiyama, Y; Sawada, Y; Iga, T; Ikeda, Y; Toda, G; Hanano, M

1989-01-16

The binding of Rose bengal, a model organic anion, to sinusoidal and bile canalicular membrane fractions isolated from rat liver was compared. The fluorescence change of Rose bengal after being bound to liver plasma membranes was utilized for measuring the binding. The dissociation constants (Kd = 0.1-0.12 microM) and the binding capacities (n = 11-15 nmol/mg protein) for Rose bengal are comparable between the two membrane fractions, although the n value for sinusoidal membrane is somewhat larger than that for bile canalicular membrane. The Rose bengal binding to both membrane fractions was inhibited by various organic anions at relatively low concentrations, i.e., the half-inhibition concentrations (IC50) for Indocyanine green, sulfobromophthalein, Bromophenol blue and 1-anilino-8-naphthalene sulfonate were 0.1, 100, 1.5-2.5 and 100 microM, respectively, while taurocholate did not inhibit the Rose bengal binding to either membrane fraction at these low concentration ranges. The type of inhibition of sulfobromophthalein and Indocyanine green for Rose bengal binding is different between the two membrane domains. That is, in sinusoidal and bile canalicular membrane fractions, these organic anions exhibit mixed-type and competitive-type inhibition, respectively. It was suggested that the fluorescence method using Rose bengal may provide a simple method for detecting the specific organic anion binding protein(s) in the liver plasma membrane.

Miocene denudation history of Himalaya deduced from IODP Exp. 354 Bengal Fan

NASA Astrophysics Data System (ADS)

Kohki, Y.; Cruz, J. W.; Osaki, A.; Manoj, M. C.; Hatano, N.; France-Lanord, C.; Spiess, V.; Klaus, A.

2017-12-01

The submarine Bengal Fan is the largest submarine fan on Earth and covers the whole Bay of Bengal. The sediments are fed by the Ganges and Brahmaputra rivers reflecting India-Asia plate collision. The sediments recovered from IODP Expedition 354 Bengal Fan record the uplift history of the Himalayan orogenic system. We examined the chemical composition of detrital garnets in the Miocene deposits from Site U1451, where drilling reached to basal horizon of the fan deposits, in order to reveal the detailed denudation history of Himalayan metamorphic rocks. For this purpose, the comparison of chemical composition between detrital garnet in the Bengal Fan deposits and metamorphic garnet in Himalayan metamorphic rocks was carried out. The chemical composition of the metamorphic garnet from Higher Himalayan Crystalline (HHC) in Karnali and Kaligandaki areas, western Nepal, was examined for chemical reference to detrital garnets in Bengal Fan. The metamorphic garnets in "Formation I (Le Fort, 1975)" in HHC are characterized by almandine-rich garnet with high pyrope content. Also, the garnets in "Formation II" are remarked by two types of garnets, i.e., almandine-rich and grandite-rich garnets. Meanwhile, the composition of garnets in "Formation III" is almandine-rich garnet with low pyrope content. In the Bengal Fan deposits, the characteristic garnets, which show the similarity to the metamorphic garnet in HHC, is not found from the Lower Miocene (Burdigalian) deposits. In the Middle and Upper Miocene deposits, the almandine-rich garnets characteristic in Formation I, are normally included. At the basal part of the Middle Miocene (Langhian), almandine-rich garnets with low pyrope content, suggesting the derivation from Formation III, are remarkable. The grandite-rich garnets from Formation II are sporadically found In the Upper Miocene deposits (Tortonian-Messinian). Above chemical comparison between the detrital garnets in Bengal Fan and metamorphic garnets from HHC

Primary Schooling in West Bengal

ERIC Educational Resources Information Center

Sen, Amartya

2010-01-01

With his Nobel Prize award money, Amartya Sen set up the Pratichi Trust which carries out research, advocacy and experimental projects in basic education, primary health care, and women's development in West Bengal and Bangladesh. Professor Sen himself took active interest in this work--helping set the agenda, looking at the evidence from…

Bulbar conjunctival sporotrichosis presenting as a salmon-pink tumor.

PubMed

Kashima, Tomoyuki; Honma, Rika; Kishi, Shoji; Hirato, Junko

2010-05-01

To report a patient with bulbar conjunctival sporotrichosis presenting as a salmon-pink tumor. This was an interventional case report. A 62-year-old woman presented with conjunctival injection in her left eye. Despite administration of topical dexamethasone sodium, ofloxacin, and levocabastine hydrochloride, her symptoms failed to improve and she was referred to us. Four weeks after referral to us, the patient gradually developed conjunctival injection in both eyes and a salmon-pink tumor in the bulbar conjunctiva of the left eye. Excision biopsy was performed and pathologic examination revealed an epithelioid granuloma with microabscesses and infiltration of plasma cells with yeast-like spherules. A sporotrichin intradermal test was strongly positive. Based on a diagnosis of sporotrichosis, we treated her with topical fluconazole 0.2% in both eyes and oral potassium iodide (450 mg). The bilateral conjunctival injection and subconjunctival tumor in the left eye gradually resolved and had completely disappeared after 3 months of treatment. This is the first report of bulbar conjunctival sporotrichosis with a salmon-pink conjunctival tumor. Although rare, ophthalmologists should be aware of this entity during examination of patients with intractable conjunctival injection.

Increased mitochondrial calcium sensitivity and abnormal expression of innate immunity genes precede dopaminergic defects in Pink1-deficient mice.

PubMed

Akundi, Ravi S; Huang, Zhenyu; Eason, Joshua; Pandya, Jignesh D; Zhi, Lianteng; Cass, Wayne A; Sullivan, Patrick G; Büeler, Hansruedi

2011-01-13

PTEN-induced kinase 1 (PINK1) is linked to recessive Parkinsonism (EOPD). Pink1 deletion results in impaired dopamine (DA) release and decreased mitochondrial respiration in the striatum of mice. To reveal additional mechanisms of Pink1-related dopaminergic dysfunction, we studied Ca²+ vulnerability of purified brain mitochondria, DA levels and metabolism and whether signaling pathways implicated in Parkinson's disease (PD) display altered activity in the nigrostriatal system of Pink1⁻/⁻ mice. Purified brain mitochondria of Pink1⁻/⁻ mice showed impaired Ca²+ storage capacity, resulting in increased Ca²+ induced mitochondrial permeability transition (mPT) that was rescued by cyclosporine A. A subpopulation of neurons in the substantia nigra of Pink1⁻/⁻ mice accumulated phospho-c-Jun, showing that Jun N-terminal kinase (JNK) activity is increased. Pink1⁻/⁻ mice 6 months and older displayed reduced DA levels associated with increased DA turnover. Moreover, Pink1⁻/⁻ mice had increased levels of IL-1β, IL-12 and IL-10 in the striatum after peripheral challenge with lipopolysaccharide (LPS), and Pink1⁻/⁻ embryonic fibroblasts showed decreased basal and inflammatory cytokine-induced nuclear factor kappa-β (NF-κB) activity. Quantitative transcriptional profiling in the striatum revealed that Pink1⁻/⁻ mice differentially express genes that (i) are upregulated in animals with experimentally induced dopaminergic lesions, (ii) regulate innate immune responses and/or apoptosis and (iii) promote axonal regeneration and sprouting. Increased mitochondrial Ca²+ sensitivity and JNK activity are early defects in Pink1⁻/⁻ mice that precede reduced DA levels and abnormal DA homeostasis and may contribute to neuronal dysfunction in familial PD. Differential gene expression in the nigrostriatal system of Pink1⁻/⁻ mice supports early dopaminergic dysfunction and shows that Pink1 deletion causes aberrant expression of genes that regulate innate

Increased Mitochondrial Calcium Sensitivity and Abnormal Expression of Innate Immunity Genes Precede Dopaminergic Defects in Pink1-Deficient Mice

PubMed Central

Akundi, Ravi S.; Huang, Zhenyu; Eason, Joshua; Pandya, Jignesh D.; Zhi, Lianteng; Cass, Wayne A.; Sullivan, Patrick G.; Büeler, Hansruedi

2011-01-01

Background PTEN-induced kinase 1 (PINK1) is linked to recessive Parkinsonism (EOPD). Pink1 deletion results in impaired dopamine (DA) release and decreased mitochondrial respiration in the striatum of mice. To reveal additional mechanisms of Pink1-related dopaminergic dysfunction, we studied Ca2+ vulnerability of purified brain mitochondria, DA levels and metabolism and whether signaling pathways implicated in Parkinson's disease (PD) display altered activity in the nigrostriatal system of Pink1−/− mice. Methods and Findings Purified brain mitochondria of Pink1−/− mice showed impaired Ca2+ storage capacity, resulting in increased Ca2+ induced mitochondrial permeability transition (mPT) that was rescued by cyclosporine A. A subpopulation of neurons in the substantia nigra of Pink1−/− mice accumulated phospho-c-Jun, showing that Jun N-terminal kinase (JNK) activity is increased. Pink1−/− mice 6 months and older displayed reduced DA levels associated with increased DA turnover. Moreover, Pink1−/− mice had increased levels of IL-1β, IL-12 and IL-10 in the striatum after peripheral challenge with lipopolysaccharide (LPS), and Pink1−/− embryonic fibroblasts showed decreased basal and inflammatory cytokine-induced nuclear factor kappa-β (NF-κB) activity. Quantitative transcriptional profiling in the striatum revealed that Pink1−/− mice differentially express genes that (i) are upregulated in animals with experimentally induced dopaminergic lesions, (ii) regulate innate immune responses and/or apoptosis and (iii) promote axonal regeneration and sprouting. Conclusions Increased mitochondrial Ca2+ sensitivity and JNK activity are early defects in Pink1−/− mice that precede reduced DA levels and abnormal DA homeostasis and may contribute to neuronal dysfunction in familial PD. Differential gene expression in the nigrostriatal system of Pink1−/− mice supports early dopaminergic dysfunction and shows that Pink1 deletion causes aberrant

Bay of Bengal Surface and Thermocline and the Arabian Sea

DTIC Science & Technology

2015-09-30

oceanographic processes that exchange low salinity surface and upper thermocline water of the Bay of Bengal with the salty Arabian Sea and tropical Indian Ocean ...two northern embayments of the Indian Ocean . OBJECTIVES Two northern Indian Ocean embayments, the Arabian Sea and the Bay of Bengal, are so close...e.g. where do the eddies come from? 2. Investigating advective pathways, and the role of isopycnal mixing, exchanging upper ocean water between the

The power of pink: cause-related marketing and the impact on breast cancer.

PubMed

Harvey, Jennifer A; Strahilevitz, Michal A

2009-01-01

The pink ribbon is one of the most widely recognized symbols in the United States. It can symbolize strength, hope, responsibility, empathy, and permission to discuss breast cancer, though not all associations are uniformly positive. Cause-related marketing is an agreement between nonprofit and for-profit organizations to promote a product that provides benefit for the cause through increasing awareness and financial contributions from sales. For-profit organizations benefit through the association of the positive ideology of the pink ribbon. The relationship between the organizations should be mutually beneficial; the percentage of funds donated should be reasonable, and the organizations that benefit should be respected institutions. Many breast cancer organizations have obtained significant benefit from corporate partnerships in cause-related marketing. Certainly, breast cancer awareness is much stronger now than 15 years ago. However, not all products are appropriate for promotion, particularly products that may increase the risk for breast cancer, such as alcohol. No corporation is licensed to have exclusive use of the pink ribbon symbol, leaving it open to potential abuse. Backlash by consumers has raised awareness of the misuse of the pink ribbon and cause-related marketing. As marketing becomes more global, the impact of the pink ribbon in the third world may spur open dialogue and reduce the taboo associated with breast cancer observed in some cultures.

First de novo whole genome sequencing and assembly of the pink-footed goose.

PubMed

Pujolar, J M; Dalén, L; Olsen, R A; Hansen, M M; Madsen, J

2018-03-01

Annotated genomes can provide new perspectives on the biology of species. We present the first de novo whole genome sequencing for the pink-footed goose. In order to obtain a high-quality de novo assembly the strategy used was to combine one short insert paired-end library with two mate-pair libraries. The pink-footed goose genome was assembled de novo using three different assemblers and an assembly evaluation was subsequently performed in order to choose the best assembler. For our data, ALLPATHS-LG performed the best, since the assembly produced covers most of the genome, while introducing the fewest errors. A total of 26,134 genes were annotated, with bird species accounting for virtually all BLAST hits. We also estimated the substitution rate in the pink-footed goose, which can be of use in future demographic studies, by using a comparative approach with the genome of the chicken, the mallard and the swan goose. A substitution rate of 1.38×10 -7 per nucleotide per generation was obtained when comparing the genomes of the two closely-related goose species (the pink-footed and the swan goose). Altogether, we provide a valuable tool for future genomic studies aiming at particular genes and regions of the pink-footed goose genome as well as other bird species. Copyright © 2017 Elsevier Inc. All rights reserved.

Thermus and the Pink Discoloration Defect in Cheese

PubMed Central

Quigley, Lisa; O’Sullivan, Daniel J.; Daly, David; O’Sullivan, Orla; Burdikova, Zuzana; Vana, Rostislav; Beresford, Tom P.; Ross, R. Paul; Fitzgerald, Gerald F.; McSweeney, Paul L. H.; Giblin, Linda

2016-01-01

ABSTRACT A DNA sequencing-based strategy was applied to study the microbiology of Continental-type cheeses with a pink discoloration defect. The basis for this phenomenon has remained elusive, despite decades of research. The bacterial composition of cheese containing the defect was compared to that of control cheese using 16S rRNA gene and shotgun metagenomic sequencing as well as quantitative PCR (qPCR). Throughout, it was apparent that Thermus, a carotenoid-producing genus, was present at higher levels in defect-associated cheeses than in control cheeses. Prompted by this finding and data confirming the pink discoloration to be associated with the presence of a carotenoid, a culture-based approach was employed, and Thermus thermophilus was successfully cultured from defect-containing cheeses. The link between Thermus and the pinking phenomenon was then established through the cheese defect equivalent of Koch’s postulates when the defect was recreated by the reintroduction of a T. thermophilus isolate to a test cheese during the manufacturing process. IMPORTANCE Pink discoloration in cheese is a defect affecting many cheeses throughout the world, leading to significant financial loss for the dairy industry. Despite decades of research, the cause of this defect has remained elusive. The advent of high-throughput, next-generation sequencing has revolutionized the field of food microbiology and, with respect to this study, provided a means of testing a possible microbial basis for this defect. In this study, a combined 16S rRNA, whole-genome sequencing, and quantitative PCR approach was taken. This resulted in the identification of Thermus, a carotenoid-producing thermophile, in defect-associated cheeses and the recreation of the problem in cheeses to which Thermus was added. This finding has the potential to lead to new strategies to eliminate this defect, and our method represents an approach that can be employed to investigate the role of microbes in other

Supplementing long-chain n-3 polyunsaturated fatty acids in canned wild Pacific pink salmon with Alaska salmon oil

PubMed Central

Lapis, Trina J; Oliveira, Alexandra C M; Crapo, Charles A; Himelbloom, Brian; Bechtel, Peter J; Long, Kristy A

2013-01-01

Establishing n-3 polyunsaturated fatty acid contents in canned wild Alaska pink salmon products is challenging due to ample natural variation found in lipid content of pink salmon muscle. This study investigated the effect of adding salmon oil (SO) to canned pink salmon produced from fish exhibiting two opposite degrees of skin watermarking, bright (B) and dark (D). Specific goals of the study were to evaluate the benefits of adding SO to canned pink salmon with regard to nutritional value of the product, sensory characteristics, and the oxidative and hydrolytic stability of the lipids over thermal processing. Six groups of canned pink salmon were produced with variable levels of SO, either using bright (with 0, 1, or 2% SO) or dark (with 0, 2, or 4% SO) pink salmon. Compositional analysis revealed highest (P < 0.05) lipid content in sample B2 (8.7%) and lowest (P < 0.05) lipid content in sample D0 (3.5%). Lipid content of samples B0, B1, D2, and D4 was not significantly different (P > 0.05) ranging from 5.7% to 6.8%. Consequently, addition of SO to canned pink salmon allowed for consistent lipid content between bright and dark fish. Addition of 1% or 2% SO to canned bright pink salmon was not detrimental to the sensory properties of the product. It is recommended that canned bright pink salmon be supplemented with at least 1% SO, while supplementation with 2% SO would guarantee a minimum quantity of 1.9 g of n-3 fatty acids per 100 g of product. Addition of 4% SO to canned dark pink salmon was detrimental to product texture and taste, while supplementation with 2% SO did not negatively affect sensorial properties of the product. Accordingly, canned dark pink salmon should be supplemented with 2% SO so that a minimum n-3 fatty acids content of 1.5 g per 100 g of product. PMID:24804010

Processing conditions and endpoint temperature effects on development of pink defect without pink-generating ligands in cooked ground turkey breast.

PubMed

Claus, James R; Jeong, Jong Youn

2018-02-01

This study was conducted to characterize the pink pigments associated with storing presalted (2%) and ground turkey breast trim at different processing conditions. Four treatments included: treatment (no NaCl, stored for 7 d before being cooked), treatment 2 (NaCl added and stored for 7 d before being cooked), treatment 3 (NaCl added and immediately cooked), and treatment 4 (stored for 7 d before NaCl added and cooked). All treatments were cooked to 4 endpoint temperatures (71.1, 73.9, 76.7, and 79.4°C). Processing conditions affected the pink defect in cooked ground turkey breast. Undenatured myoglobin in salted meat (treatment 2, 3, 4) still remained (17 to 19%) after cooking. Salted and stored ground turkey (treatment 2) produced a cooked product with the most reducing condition (lowest oxidation-reduction potential, ORP) and one of the most red coloration (CIE a* values). Final internal temperature had limited effects on pigment properties. ORP was similar across cooking temperatures but CIE a* values decreased with temperature. Even at 79.4°C, 15% undenatured myoglobin remained. Cooking yield decreased with temperature as expected (92.8 to 89.5%). Results indicate that to limit the degree of the pink color development processors should avoid storage of ground turkey, particularly when mixed with salt, as it favors the formation of nicotinamide-denatured globin hemochrome. © 2017 Poultry Science Association Inc.

Nix restores mitophagy and mitochondrial function to protect against PINK1/Parkin-related Parkinson's disease.

PubMed

Koentjoro, Brianada; Park, Jin-Sung; Sue, Carolyn M

2017-03-10

Therapeutic targets are needed to develop neuroprotective treatments for Parkinson's disease (PD). Mitophagy, the selective autophagic elimination of dysfunctional mitochondria, is essential for the maintenance of mitochondrial integrity and is predominantly regulated by the PINK1/Parkin-mediated pathway. Loss of function mutations in Parkin and PINK1 cause an accumulation of dysfunctional mitochondria, leading to nigral neurodegeneration and early-onset PD with a high penetrance rate. We previously identified an asymptomatic homozygous Parkin mutation carrier who had not developed PD by her eighth decade despite the loss of functional Parkin. Here we discover a putative mechanism that protects her against PD. In contrast to Parkin-related PD patient-derived cells, the asymptomatic carrier cells show preserved mitochondrial function and mitophagy which is mediated by mitochondrial receptor Nip3-like protein X (Nix). Nix-mediated mitophagy was not affected by PINK1 knockdown. Both genetic and pharmacological induction of Nix restores mitophagy in PINK1- and Parkin-related PD patient cell lines, confirming its ability to induce mitophagy in the absence of PINK1/Parkin-mediated pathway. Moreover, Nix over-expression improves mitochondrial ATP production in these patient cells. Our results demonstrate that Nix can serve as an alternative mediator of mitophagy to maintain mitochondrial turnover, identifying Nix as a promising target for neuroprotective treatment in PINK1/Parkin-related PD.

Parkin and PINK1 function in a vesicular trafficking pathway regulating mitochondrial quality control

PubMed Central

McLelland, Gian-Luca; Soubannier, Vincent; Chen, Carol X; McBride, Heidi M; Fon, Edward A

2014-01-01

Mitochondrial dysfunction has long been associated with Parkinson's disease (PD). Parkin and PINK1, two genes associated with familial PD, have been implicated in the degradation of depolarized mitochondria via autophagy (mitophagy). Here, we describe the involvement of parkin and PINK1 in a vesicular pathway regulating mitochondrial quality control. This pathway is distinct from canonical mitophagy and is triggered by the generation of oxidative stress from within mitochondria. Wild-type but not PD-linked mutant parkin supports the biogenesis of a population of mitochondria-derived vesicles (MDVs), which bud off mitochondria and contain a specific repertoire of cargo proteins. These MDVs require PINK1 expression and ultimately target to lysosomes for degradation. We hypothesize that loss of this parkin- and PINK1-dependent trafficking mechanism impairs the ability of mitochondria to selectively degrade oxidized and damaged proteins leading, over time, to the mitochondrial dysfunction noted in PD. PMID:24446486

Development of a novel pink-eyed dilution mouse model showing progressive darkening of the eyes and coat hair with aging

PubMed Central

ISHIKAWA, Akira; SUGIYAMA, Makoto; HONDO, Eiichi; KINOSHITA, Keiji; YAMAGISHI, Yuki

2015-01-01

Oca2p-cas (oculocutaneous albinism II; pink-eyed dilution castaneus) is a coat color mutant gene on mouse chromosome 7 that arose spontaneously in wild Mus musculus castaneus mice. Mice homozygous for Oca2p-cas usually exhibit pink eyes and gray coat hair on the non-agouti genetic background, and this ordinary phenotype remains unchanged throughout life. During breeding of a mixed strain carrying this gene on the C57BL/6J background, we discovered a novel spontaneous mutation that causes darkening of the eyes and coat hair with aging. In this study, we developed a novel mouse model showing this unique phenotype. Gross observations revealed that the pink eyes and gray coat hair of the novel mutant young mice became progressively darker in color by approximately 3 months after birth. Light and transmission-electron microscopic observations revealed a marked increase in melanin pigmentation of coat hair shafts and choroid of the eye in the novel mice compared to that in the ordinary mice. Sequence analysis of Oca2p-cas revealed a 4.1-kb deletion involving exons 15 and 16 of its wild-type gene. However, there was no sequence difference between the two types of mutant mice. Mating experiments suggested that the novel mutant phenotype was not inherited in a simple fashion, due to incomplete penetrance. The novel spontaneous mutant mouse is the first example of progressive hair darkening animals and is an essential animal model for understanding of the regulation mechanisms of melanin biosynthesis with aging. PMID:25739360

Development of a novel pink-eyed dilution mouse model showing progressive darkening of the eyes and coat hair with aging.

PubMed

Ishikawa, Akira; Sugiyama, Makoto; Hondo, Eiichi; Kinoshita, Keiji; Yamagishi, Yuki

2015-01-01

Oca2(p-cas) (oculocutaneous albinism II; pink-eyed dilution castaneus) is a coat color mutant gene on mouse chromosome 7 that arose spontaneously in wild Mus musculus castaneus mice. Mice homozygous for Oca2(p-cas) usually exhibit pink eyes and gray coat hair on the non-agouti genetic background, and this ordinary phenotype remains unchanged throughout life. During breeding of a mixed strain carrying this gene on the C57BL/6J background, we discovered a novel spontaneous mutation that causes darkening of the eyes and coat hair with aging. In this study, we developed a novel mouse model showing this unique phenotype. Gross observations revealed that the pink eyes and gray coat hair of the novel mutant young mice became progressively darker in color by approximately 3 months after birth. Light and transmission-electron microscopic observations revealed a marked increase in melanin pigmentation of coat hair shafts and choroid of the eye in the novel mice compared to that in the ordinary mice. Sequence analysis of Oca2(p-cas) revealed a 4.1-kb deletion involving exons 15 and 16 of its wild-type gene. However, there was no sequence difference between the two types of mutant mice. Mating experiments suggested that the novel mutant phenotype was not inherited in a simple fashion, due to incomplete penetrance. The novel spontaneous mutant mouse is the first example of progressive hair darkening animals and is an essential animal model for understanding of the regulation mechanisms of melanin biosynthesis with aging.

Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser65

PubMed Central

Kazlauskaite, Agne; Kondapalli, Chandana; Gourlay, Robert; Campbell, David G.; Ritorto, Maria Stella; Hofmann, Kay; Alessi, Dario R.; Knebel, Axel; Trost, Matthias; Muqit, Miratul M. K.

2014-01-01

We have previously reported that the Parkinson's disease-associated kinase PINK1 (PTEN-induced putative kinase 1) is activated by mitochondrial depolarization and stimulates the Parkin E3 ligase by phosphorylating Ser65 within its Ubl (ubiquitin-like) domain. Using phosphoproteomic analysis, we identified a novel ubiquitin phosphopeptide phosphorylated at Ser65 that was enriched 14-fold in HEK (human embryonic kidney)-293 cells overexpressing wild-type PINK1 stimulated with the mitochondrial uncoupling agent CCCP (carbonyl cyanide m-chlorophenylhydrazone), to activate PINK1, compared with cells expressing kinase-inactive PINK1. Ser65 in ubiquitin lies in a similar motif to Ser65 in the Ubl domain of Parkin. Remarkably, PINK1 directly phosphorylates Ser65 of ubiquitin in vitro. We undertook a series of experiments that provide striking evidence that Ser65-phosphorylated ubiquitin (ubiquitinPhospho−Ser65) functions as a critical activator of Parkin. First, we demonstrate that a fragment of Parkin lacking the Ubl domain encompassing Ser65 (ΔUbl-Parkin) is robustly activated by ubiquitinPhospho−Ser65, but not by non-phosphorylated ubiquitin. Secondly, we find that the isolated Parkin Ubl domain phosphorylated at Ser65 (UblPhospho−Ser65) can also activate ΔUbl-Parkin similarly to ubiquitinPhospho−Ser65. Thirdly, we establish that ubiquitinPhospho−Ser65, but not non-phosphorylated ubiquitin or UblPhospho−Ser65, activates full-length wild-type Parkin as well as the non-phosphorylatable S65A Parkin mutant. Fourthly, we provide evidence that optimal activation of full-length Parkin E3 ligase is dependent on PINK1-mediated phosphorylation of both Parkin at Ser65 and ubiquitin at Ser65, since only mutation of both proteins at Ser65 completely abolishes Parkin activation. In conclusion, the findings of the present study reveal that PINK1 controls Parkin E3 ligase activity not only by phosphorylating Parkin at Ser65, but also by phosphorylating ubiquitin at Ser65

Monotonic trends in spatio-temporal distribution and concentration of monsoon precipitation (1901-2002), West Bengal, India

NASA Astrophysics Data System (ADS)

Chatterjee, Soumendu; Khan, Ansar; Akbari, Hashem; Wang, Yupeng

2016-12-01

This paper intended to investigate spatio-temporal monotonic trend and shift in concentration of monsoon precipitation across West Bengal, India, by analysing the time series of monthly precipitation from 18 weather stations during the period from 1901 to 2002. In dealing with, the inhomogeneity in the precipitation series, RHtestsV4 software package is used to detect, and adjust for, multiple change points (shifts) that could exist in data series. Finally, the cumulative deviation test was applied at 5% significant level to check the homogeneity (presence of historic changes by cumulative deviations test). Afterward, non-parametric Mann-Kendall (MK) test and Theil-Sen estimator (TSE) was applied to detect of nature and slope of trends; and, Sequential Mann Kendall (SQMK) test was applied for detection of turning point and magnitude of change in trends. Prior to the application of statistical tests, the pre-whitening technique was used to eliminate the effect of autocorrelation in precipitation data series. Four indices- precipitation concentration index (PCI), precipitation concentration degree (PCD), precipitation concentration period (PCP) and fulcrum (centre of gravity) were used to detect precipitation concentration and the spatial pattern in it. The application of the above-mentioned procedures has shown very notable statewide monotonic trend for monsoon precipitation time series. Regional cluster analysis by SQMK found increasing precipitation in mountain and coastal regions in general, except during the non- monsoon seasons. The results show that higher PCI values were mainly observed in South Bengal, whereas lower PCI values were mostly detected in North Bengal. The PCI values are noticeably larger in places where both monsoon total precipitation and span of rainy season are lower. The results of PCP reveal that precipitation in Gangetic Bengal mostly occurs in summer (monsoon season), and the rainy season arrives earlier in North Bengal than South Bengal

Godavari River Delta Panorama, Bay of Bengal, India

NASA Image and Video Library

1993-01-19

STS054-80-024 (13-19 Jan 1993) --- As the Shuttle was passing southeast over the coast of India, approaching the Bay of Bengal, Endeavour's crew took this picture of the Godavari River Delta. The sun glint pattern was centered directly over the delta and highlighted well the intricate drainage pattern. Offshore, water features associated with current boundaries and river plumes are readily visible. The line of clouds along the coast south of the delta suggest that surface winds are blowing onshore from the Bay of Bengal. As the air passes over the warmer coastal water and land, it is warmed and begins to rise. The moisture in the air condenses, forming a line of low-level clouds.

Vertical Structure of Aerosols and Mineral Dust Over the Bay of Bengal From Multisatellite Observations

NASA Astrophysics Data System (ADS)

Lakshmi, N. B.; Nair, Vijayakumar S.; Suresh Babu, S.

2017-12-01

The vertical distribution of aerosol and dust extinction coefficient over the Bay of Bengal is examined using the satellite observations (Cloud Aerosol Lidar with Orthogonal Polarization (CALIOP) and Moderate Resolution Imaging Spectroradiometer (MODIS)) for the period from 2006 to 2017. Distinct seasonal pattern is observed in the vertical structure of both aerosol and dust over the Bay of Bengal with an enhancement of 24% in the aerosol extinction above 1 km from winter (December, January and February) to premonsoon (March, April, and May). Significant contribution of dust is observed over the northern Bay of Bengal during premonsoon season where 22% of the total aerosol extinction is contributed by dust aerosols transported from the nearby continental regions. During winter, dust transport is found to be less significant with fractional contribution of 10%-13% to the total aerosol optical depth over the Bay of Bengal. MODIS-derived dust fraction (fine mode based) shows an overestimation up to twofold compared to CALIOP dust fraction (depolarization based), whereas the Goddard Chemistry Aerosol Radiation and Transport-simulated dust fraction underestimates the satellite-derived dust fractions over the Bay of Bengal. Though the long-term variation in dust aerosol showed a decreasing trend over the Bay of Bengal, the confidence level is insufficient in establishing the robustness of the observed trend. However, significant dust-induced heating is observed above the boundary layer during premonsoon season. This dust-induced elevated heating can affect the convection over the Bay of Bengal which will have implication on the monsoon dynamics over the Indian region.

PINK1 heterozygous mutations induce subtle alterations in dopamine-dependent synaptic plasticity

PubMed Central

Madeo, G.; Schirinzi, T.; Martella, G.; Latagliata, E.C.; Puglisi, F.; Shen, J.; Valente, E.M.; Federici, M.; Mercuri, N.B.; Puglisi-Allegra, S.; Bonsi, P.; Pisani, A.

2014-01-01

Background Homozygous or compound heterozygous mutations in the PTEN-induced kinase 1 (PINK1) gene are causative of autosomal recessive, early onset PD. Single heterozygous mutations have been repeatedly detected in a subset of patients as well as in non-affected subjects, and their significance has long been debated. Several neurophysiological studies from non-manifesting PINK1 heterozygotes have shown the existence of neural plasticity abnormalities, indicating the presence of specific endophenotypic traits in the heterozygous state. Methods In the present study, we performed a functional analysis of corticostriatal synaptic plasticity in heterozygous PINK1 knock-out (PINK1+/−) mice by a multidisciplinary approach. Results We found that, despite a normal motor behavior, repetitive activation of cortical inputs to striatal neurons failed to induce long-term potentiation (LTP), whereas long-term depression (LTD) was normal. Although nigral dopaminergic neurons exhibited normal morphological and electrophysiological properties with normal responses to dopamine receptor activation, we measured a significantly lower dopamine release in the striatum of PINK1+/−, compared to control mice, suggesting that a decrease in stimulus-evoked dopamine overflow acts as a major determinant for the LTP deficit. Accordingly, pharmacological agents capable of increasing the availability of dopamine in the synaptic cleft restored a normal LTP in heterozygous mice. Moreover, MAO-B inhibitors rescued a physiological LTP and a normal dopamine release. Conclusions Our results provide novel evidence for striatal plasticity abnormalities even in the heterozygous disease state. These alterations might be considered an endophenotype to this monogenic form of PD, and a valid tool to characterize early disease stage and design possible disease-modifying therapies. PMID:24167038

Assessment of Rose Bengal vs. Riboflavin Photodynamic Therapy for Inhibition of Fungal Keratitis Isolates

PubMed Central

Arboleda, Alejandro; Miller, Darlene; Cabot, Florence; Taneja, Mukesh; Aguilar, Mariela C.; Alawa, Karam; Amescua, Guillermo; Yoo, Sonia H.; Parel, Jean-Marie

2014-01-01

Purpose To compare the in vitro effect of rose bengal and riboflavin as photosensitizing agents for photodynamic therapy (PDT) on fungal isolates that are common causes of fungal keratitis Design Experimental study Methods Three isolates (Fusarium solani, Aspergillus fumigatus, Candida albicans) recovered from patients with confirmed fungal keratitis were used in the experiments. Isolates were grown on Sabouraud-Dextrose agar, swabbed and prepared in suspension, and one milliliter aliquots were inoculated onto test plates in triplicate. Test plates were separated into 5 groups: Group 1 - no treatment, Group 2 - 0.1% rose bengal alone, Group 3 - 518 nm irradiation alone, Group 4 - riboflavin PDT (riboflavin + 375 nm irradiation), and Group 5 - rose bengal PDT (rose bengal + 518 nm irradiation). Irradiation was performed over a circular area using either a green LED array (peak wavelength: 518 nm) or a UV-A LED array (peak wavelength: 375 nm). Test plates were irradiated with an energy density of 5.4 J/cm2. Later, plates were placed in a 30° C incubator and observed for growth. Results Rose bengal-mediated PDT successfully inhibited the growth of all three fungal isolates in the irradiated area. All other groups exhibited unrestricted growth throughout the plate. Conclusions Rose bengal-mediated PDT successfully inhibited the growth of three types of fungi. No other experimental groups, including riboflavin-mediated PDT, had any inhibitory effect on the isolates. The results might be useful for the treatment of patients suffering from corneal infection. PMID:24792103

The rat pink-eyed dilution (p) mutation: an identical intragenic deletion in pink-eye dilute-coat strains and several Wistar-derived albino strains.

PubMed

Kuramoto, Takashi; Gohma, Hiroshi; Kimura, Kunio; Wedekind, Dirk; Hedrich, Hans J; Serikawa, Tadao

2005-09-01

We identified the rat pink-eyed dilution (p) and pink eye Mishima (p(m)) mutations. The p(m) mutation, which was isolated from a wild rat caught in Mishima Japan in 1961 and is carried in the NIG-III strain, is a splice donor site mutation in intron 5. The p mutation, which was first described in 1914 and is carried in several p/p rats including the RCS and BDV strains, is an intragenic deletion including exons 17 and 18. In addition to RCS and BDV strains, several albino strains, KHR, KMI and WNA, all descendants of albino stock of the Wistar Institute, are homozygous for the p allele. Analyses revealed that the colored p strains and the Wistar-derived albino p strains had the same marker haplotype spanning approximately 4 Mb around the P locus. This indicates that these p strains share a common ancestor and the p allele did not arise independently via recurrent mutations. The historical relationship among the p strains suggests that the p deletion had been maintained in stock heterogeneous for the C and P loci and then was inherited independently by the ancestor of the Wistar albino stock and the ancestor of the pink-eyed agouti rats in Europe.

Involvement of PINK1/parkin-mediated mitophagy in ZnO nanoparticle-induced toxicity in BV-2 cells.

PubMed

Wei, Limin; Wang, Jianfeng; Chen, Aijie; Liu, Jia; Feng, Xiaoli; Shao, Longquan

2017-01-01

With the increasing application of zinc oxide nanoparticles (ZnO NPs) in biological materials, the neurotoxicity caused by these particles has raised serious concerns. However, the underlying molecular mechanisms of the toxic effect of ZnO NPs on brain cells remain unclear. Mitochondrial damage has been reported to be a factor in the toxicity of ZnO NPs. PINK1/parkin-mediated mitophagy is a newly emerging additional function of autophagy that selectively degrades impaired mitochondria. Here, a PINK1 gene knockdown BV-2 cell model was established to determine whether PINK1/parkin-mediated mitophagy was involved in ZnO NP-induced toxicity in BV-2 cells. The expression of total parkin, mito-parkin, cyto-parkin, and PINK1 both in wild type and PINK1 -/- BV-2 cells was evaluated using Western blot analysis after the cells were exposed to 10 μg/mL of 50 nm ZnO NPs for 2, 4, 8, 12, and 24 h. The findings suggested that the downregulation of PINK1 resulted in a significant reduction in the survival rate after ZnO NP exposure compared with that of control cells. ZnO NPs were found to induce the transportation of parkin from the cytoplasm to the mitochondria, implying the involvement of mitophagy in ZnO NP-induced toxicity. The deletion of the PINK1 gene inhibited the recruitment of parkin to the mitochondria, causing failure of the cell to trigger mitophagy. The present study demonstrated that apart from autophagy, PINK1/parkin-mediated mitophagy plays a protective role in ZnO NP-induced cytotoxicity.

Involvement of PINK1/parkin-mediated mitophagy in ZnO nanoparticle-induced toxicity in BV-2 cells

PubMed Central

Wei, Limin; Wang, Jianfeng; Chen, Aijie; Liu, Jia; Feng, Xiaoli; Shao, Longquan

2017-01-01

With the increasing application of zinc oxide nanoparticles (ZnO NPs) in biological materials, the neurotoxicity caused by these particles has raised serious concerns. However, the underlying molecular mechanisms of the toxic effect of ZnO NPs on brain cells remain unclear. Mitochondrial damage has been reported to be a factor in the toxicity of ZnO NPs. PINK1/parkin-mediated mitophagy is a newly emerging additional function of autophagy that selectively degrades impaired mitochondria. Here, a PINK1 gene knockdown BV-2 cell model was established to determine whether PINK1/parkin-mediated mitophagy was involved in ZnO NP-induced toxicity in BV-2 cells. The expression of total parkin, mito-parkin, cyto-parkin, and PINK1 both in wild type and PINK1−/− BV-2 cells was evaluated using Western blot analysis after the cells were exposed to 10 μg/mL of 50 nm ZnO NPs for 2, 4, 8, 12, and 24 h. The findings suggested that the downregulation of PINK1 resulted in a significant reduction in the survival rate after ZnO NP exposure compared with that of control cells. ZnO NPs were found to induce the transportation of parkin from the cytoplasm to the mitochondria, implying the involvement of mitophagy in ZnO NP-induced toxicity. The deletion of the PINK1 gene inhibited the recruitment of parkin to the mitochondria, causing failure of the cell to trigger mitophagy. The present study demonstrated that apart from autophagy, PINK1/parkin-mediated mitophagy plays a protective role in ZnO NP-induced cytotoxicity. PMID:28331313

7 CFR 29.3049 - Pink or pinkish.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 2 2010-01-01 2010-01-01 false Pink or pinkish. 29.3049 Section 29.3049 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing... color affecting 20 percent or more of its leaf surface is considered as mixed color. (See Rule 16.) [24...

7 CFR 29.3049 - Pink or pinkish.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 2 2011-01-01 2011-01-01 false Pink or pinkish. 29.3049 Section 29.3049 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing... color affecting 20 percent or more of its leaf surface is considered as mixed color. (See Rule 16.) [24...

Status of women in two Bengals: evidence from large scale surveys.

PubMed

Chattopadhyay, Aparajita; Goswami, Baishali

2007-03-01

Greater female autonomy is mirrored through better performance in the major demographic and social indicators. This study attempts to capture the effect of religion on the status of women considering 'Greater Bengal'. There is much evidence suggesting that when cultural factors are constant, religion does not have a significant effect on any demographic issue. In this paper, the validity of this proposition is examined using two datasets, namely NFHS II (98-99) and BDHS 2000. It is clear from the analyses that not only region but also religion has a distinct effect on the status of women. In West Bengal, the religious gap for all the indicators considered is pretty high, whereas in Bangladesh the gap is not that wide. A state-level population policy is needed in West Bengal to act as a social leveller.

Downregulation of Pink1 influences mitochondrial fusion–fission machinery and sensitizes to neurotoxins in dopaminergic cells

PubMed Central

Rojas-Charry, Liliana; Cookson, Mark R.; Niño, Andrea; Arboleda, Humberto; Arboleda, Gonzalo

2016-01-01

It is now well established that mitochondria are organelles that, far from being static, are subject to a constant process of change. This process, which has been called mitochondrial dynamics, includes processes of both fusion and fission. Loss of Pink1 (PTEN-induced putative kinase 1) function is associated with early onset recessive Parkinson’s disease and it has been proposed that mitochondrial dynamics might be affected by loss of the mitochondrial kinase. Here, we report the effects of silencing Pink1 on mitochondrial fusion and fission events in dopaminergic neuron cell lines. Cells lacking Pink1 were more sensitive to cell death induced by C2-Ceramide, which inhibits proliferation and induces apoptosis. In the same cell lines, mitochondrial morphology was fragmented and this was enhanced by application of forskolin, which stimulates the cAMP pathway that phosphorylates Drp1 and thereby inactivates it. Cells lacking Pink1 had lower Drp1 and Mfn2 expression. Based on these data, we propose that Pink1 may exert a neuroprotective role in part by limiting mitochondrial fission. PMID:24792327

Tidal and seasonal effects on transport of pink shrimp postlarvae

USGS Publications Warehouse

Criales, Maria M.; Wang, Jingyuan; Browder, Joan A.; Robblee, M.B.

2005-01-01

Transport simulations were conducted to investigate a large seasonal peak in postlarvae of the pink shrimp Farfantepenaeus duorarum that occurs every summer on the northwestern border of Florida Bay. Daily vertical migration, a known behavior in pink shrimp postlarvae, was assumed in all scenarios investigated. A Lagrangian trajectory model was developed using a current field derived from a 3 yr ADCP (Acoustic Doppler Current Profiler) time series. To fit the estimated planktonic development time of pink shrimp, the model simulated larvae traveling at night over a 30 d period. We investigated 2 types of effects: (1) the effect of mismatch periodicity between tidal constituents and daily migration, and (2) the effect of seasonal changes in night length. The maximum eastward displacement with the semidiurnal lunar tidal constituent (M2) was 4 km, with periods of enhanced transport in both summer and winter. In contrast, eastward displacement with the semidiurnal solar tidal constituent (S2) and the lunisolar diurnal K1 was 65 km and the period of maximum distance occurred in summer every year. Because the periods of S2 and K1 are so close to the 24 h vertical migration period, and the eastward current (flood) of these constituents matches the diel cycle over extended intervals, they can induce strong horizontal transport during summer. Thus, diel vertical migration can interact with the S2 and the K1 tidal constituents and with the annual cycle of night length to produce a distinct annual cycle that may enhance transport of pink shrimp and other coastal species during summer in shallow areas of the Gulf of Mexico. ?? Inter-Research 2005.

Pink hypopyon in a patient with Serratia marcescens corneal ulceration.

PubMed

Stefater, James A; Borkar, Durga S; Chodosh, James

2015-01-01

A 65-year-old woman presented to the emergency ward at the Massachusetts Eye and Ear Infirmary with 2 days of redness, irritation, photophobia, and diminished vision in her left eye. She was found to have a large central corneal ulcer with a small hypopyon. On the following day, after initiation of broad-spectrum antibiotics, the patient had improved symptoms but now had a 2-mm hypopyon that was distinctly pink in color. Cultures were positive for Serratia marcescens. A pink hypopyon, a rare occurrence, alerted the authors to a causative agent of Enterobacteriacae, either Klebsiella or Serratia. Immediate and intensive treatment was subsequently initiated.

422 A Rare Case of Food-induced Anaphylaxis to Pink Peppercorns

PubMed Central

Kim, John; Minikes, Neil

2012-01-01

Background The incidence and prevalence of food allergies appear to be on the rise over the past 20 years. The most common foods to produce an IgE mediated hypersensitivity reaction in adults include peanut, tree nuts, and seafood. The increased use of spices in the U.S. has resulted in a growing number of patients presenting with hypersensitivity reactions. Methods We report a case of a 26 year-old-female who developed anaphylaxis after ingesting pink peppercorn seasoning. The patient was diagnosed with a tree nut allergy at 18 years of age when she developed hives, vomiting and throat closure after ingesting cashews. More recently, she had 3 similar anaphylactic episodes requiring epinephrine and emergency room care when she unknowingly consumed tree nuts contained in foods while dining out (veggie burger, pesto sauce, almonds in Indian food). She again had similar symptoms while eating a home prepared meal in which tree nuts were not included. Intramuscular epinephrine was administered and she was subsequently treated with oral steroids and antihistamines. It was later determined that a new peppercorn medley with pink peppercorns was used for seasoning. The reaction did not occur when she ate the same meal without pink peppercorn seasoning. Food specific IgE testing revealed an elevated IgE for cashews (2.52 kUA/L) and pistachios (2.85 kUA/L). Results Pink peppercorn is not a true pepper, but dried roasted berries derived from Schinus terebinthifolius, a flowering plant in the family Anacardiaceae, native to South America. Common names include Brazilian Pepper, Rose Pepper and Christmasberry. Pink peppercorns are used as a spice to add a mild pepper-like taste to foods. It may potentially cause an irritating skin effect and has been associated with atopic dermatitis in canines. Interestingly, S. terebinthifolius is a member of the family Anacardiaceae, which include plants in the genus Anacardium (cashew nut) and Pistacia (pistachio). No allergens from this

LncRNA NEAT1 promotes autophagy in MPTP-induced Parkinson's disease through stabilizing PINK1 protein.

PubMed

Yan, Wang; Chen, Zhao-Ying; Chen, Jia-Qi; Chen, Hui-Min

2018-02-19

Long non-coding RNA nuclear paraspeckle assembly transcript 1 (lncRNA NEAT1) was found to be closely related to the pathological changes in brain and nervous system. However, the role of NEAT1 and its potential mechanism in Parkinson's disease (PD) largely remain uncharacterized. In this study, PD mouse model was established by intraperitoneal injection of MPTP. The numbers of TH + neurons, NEAT1 expression and the level of PINK1, LC3-II, LC3-I protein were assessed in PD mice. SH-SY5Y cells were treated with MPP + as PD cell model. RNA pull-down assay was used to identify the interaction between NEAT1 and PINK1 in vitro. The endogenous expression of NEAT1 was modified by lentiviral vector carrying interference sequence for NEAT1 in vivo. The numbers of TH + neurons significantly decreased in PD mice compared with the control. The expressions of NEAT1, PINK1 protein and LC3-II/LC3-I level were increased by MPTP in vitro and in vivo. Moreover, NEAT1 positively regulated the protein level of PINK1 through inhibition of PINK1 protein degradation. And NEAT1 mediated the effects of MPP + on SH-SY5Y cells through stabilization of PINK1 protein. The results of in vivo experiments revealed that NEAT1 knockdown could effectively suppress MPTP-induced autophagy in vivo that alleviated dopaminergic neuronal injury. LncRNA NEAT1 promoted the MPTP-induced autophagy in PD through stabilization of PINK1 protein. Copyright © 2017 Elsevier Inc. All rights reserved.

Mitochondrial targeted HSP90 inhibitor Gamitrinib-TPP (G-TPP) induces PINK1/Parkin-dependent mitophagy.

PubMed

Fiesel, Fabienne C; James, Elle D; Hudec, Roman; Springer, Wolfdieter

2017-12-05

Loss-of-function mutations in PINK1 or PARKIN are associated with early-onset Parkinson's disease. Upon mitochondrial stress, PINK1 and Parkin together mediate a response that protects cells from the accumulation of harmful, damaged mitochondria. PINK1, the upstream kinase accumulates on the mitochondrial surface and recruits the E3 ubiquitin ligase Parkin on site to ubiquitylate substrate proteins. The joint activity of both to generate phosphorylated poly-ubiquitin chains on the mitochondrial surface induces the recruitment of autophagy receptors and eventually whole organelles are cleared by autophagy. While this pathway is generally accepted to occur upon chemical uncoupling of mitochondria, the (patho-) physiologic relevance has been questioned. However, few studies have indicated that PINK1 and Parkin are also activated upon accumulation of misfolded proteins in the mitochondrial lumen upon overexpression of ΔOTC (Ornithine transcarbamylase). Here, we used the mitochondrial targeted HSP90 inhibitor Gamitrinib-triphenylphosphonium (G-TPP), an anti-cancer agent, to chemically interfere with mitochondrial protein folding. G-TPP treatment induced PINK1 accumulation, ubiquitin phosphorylation at Ser65, Parkin activation and its recruitment to mitochondria was specific for mitochondrial HSP90 inhibition and largely independent of mitochondrial membrane depolarization. Mitophagy induction was observed by monitoring autophagy receptor recruitment and the mitoKeima reporter. Importantly, mitophagy was not only induced in cancer cells but also in primary human fibroblasts and thereof converted neurons. G-TPP treatment might represent a novel strategy to study PINK1 and Parkin-mediated mitochondrial quality control using a more physiologically relevant stress.

Real-time Supervised Detection of Pink Areas in Dermoscopic Images of Melanoma: Importance of Color Shades, Texture and Location

PubMed Central

Kaur, Ravneet; Albano, Peter P.; Cole, Justin G.; Hagerty, Jason; LeAnder, Robert W.; Moss, Randy H.; Stoecker, William V.

2015-01-01

Background/Purpose Early detection of malignant melanoma is an important public health challenge. In the USA, dermatologists are seeing more melanomas at an early stage, before classic melanoma features have become apparent. Pink color is a feature of these early melanomas. If rapid and accurate automatic detection of pink color in these melanomas could be accomplished, there could be significant public health benefits. Methods Detection of three shades of pink (light pink, dark pink, and orange pink) was accomplished using color analysis techniques in five color planes (red, green, blue, hue and saturation). Color shade analysis was performed using a logistic regression model trained with an image set of 60 dermoscopic images of melanoma that contained pink areas. Detected pink shade areas were further analyzed with regard to the location within the lesion, average color parameters over the detected areas, and histogram texture features. Results Logistic regression analysis of a separate set of 128 melanomas and 128 benign images resulted in up to 87.9% accuracy in discriminating melanoma from benign lesions measured using area under the receiver operating characteristic curve. The accuracy in this model decreased when parameters for individual shades, texture, or shade location within the lesion were omitted. Conclusion Texture, color, and lesion location analysis applied to multiple shades of pink can assist in melanoma detection. When any of these three details: color location, shade analysis, or texture analysis were omitted from the model, accuracy in separating melanoma from benign lesions was lowered. Separation of colors into shades and further details that enhance the characterization of these color shades are needed for optimal discrimination of melanoma from benign lesions. PMID:25809473

Doxorubicin-induced mitophagy and mitochondrial damage is associated with dysregulation of the PINK1/parkin pathway.

PubMed

Yin, Jian; Guo, Jiabin; Zhang, Qiang; Cui, Lan; Zhang, Li; Zhang, Tingfen; Zhao, Jun; Li, Jin; Middleton, Alistair; Carmichael, Paul L; Peng, Shuangqing

2018-09-01

The usefulness of doxorubicin (DOX), a potent anticancer agent, is limited by its cardiotoxicity. Mitochondria play a central role in DOX-induced cardiotoxicity though the precise mechanisms are still obscure. Increasing evidence indicates that excessive activation of mitophagy and mitochondrial dysfunction are key causal events leading to DOX-induced cardiac injury. The PINK1/parkin pathway has emerged as a critical pathway in regulation of mitophagy as well as mitochondrial function. The present study was aimed to investigate the role of PINK1/parkin pathway in DOX-induced mitochondrial damage and cardiotoxicity. Our results showed that DOX concentration-dependently induced cytotoxicity and mitochondrial toxic effects including mitochondrial superoxide accumulation, decreased mitochondrial membrane potential and mitochondrial DNA copy number, as well as mitochondrial ultrastructural alterations. DOX induced mitophagy as evidenced by increases of the markers of autophagosomes, LC3, Beclin 1, reduction of p62, and co-localization of LC3 in mitochondria. DOX activated PINK1/parkin pathway and promoted translocation of PINK1/parkin to mitochondria. Meanwhile, DOX inhibited the expression of PGC-1α and its downstream targets nuclear respiratory factor 1 (NRF1) and mitochondrial transcription factor A (TFAM), and reduced the expression of mitochondrial proteins. Inhibition of mitophagy by mdivi-1 was found to attenuate activation of the PINK1/parkin pathway by DOX and preserve mitochondrial biogenesis, consequently mitigating DOX-induced mitochondrial superoxide overproduction and mitochondrial dysfunction. Moreover, scavenging mitochondrial superoxide by Mito-tempo was also found to effectively attenuate activation of the PINK1/parkin pathway and rescue the cells from DOX-induced adverse effects. Taken together, these findings suggest that DOX-induced mitophagy and mitochondrial damage in cardiomyocytes are mediated, at least in part, by dysregulation of the PINK1

The Roles of PINK1, Parkin and Mitochondrial Fidelity in Parkinson's Disease

PubMed Central

Pickrell, Alicia M.; Youle, Richard J.

2015-01-01

Understanding the function of genes mutated in hereditary forms of Parkinson's disease yields insight into disease etiology and reveals new pathways in cell biology. Although mutations or variants in many genes increase the susceptibility to Parkinson's disease, only a handful of monogenic causes of Parkinsonism have been identified. Biochemical and genetic studies reveal that the products of two genes that are mutated in autosomal recessive Parkinsonism, PINK1 and Parkin, normally work together in the same pathway to govern mitochondrial quality control, bolstering previous evidence that mitochondrial damage is involved in Parkinson's disease. PINK1 accumulates on the outer membrane of damaged mitochondria, activates Parkin's E3 ubiquitin ligase activity and recruits Parkin to the dysfunctional mitochondrion. Then, Parkin ubiquitinates outer mitochondrial membrane proteins to trigger selective autophagy. This review covers the normal functions that PINK1 and Parkin play within cells, their molecular mechanisms of action, and the pathophysiological consequences of their loss. PMID:25611507

PINK1-Parkin alleviates metabolic stress induced by obesity in adipose tissue and in 3T3-L1 preadipocytes.

PubMed

Cui, Chen; Chen, Shihong; Qiao, Jingting; Qing, Li; Wang, Lingshu; He, Tianyi; Wang, Chuan; Liu, Fuqiang; Gong, Lei; Chen, Li; Hou, Xinguo

2018-04-06

Mitochondria play an important role in cellular metabolism and are closely related with metabolic stress. Recently, several studies have shown that mitophagy mediated by PTEN-induced putative kinase 1 (PINK1) and Parkin may play a critical role in clearing the damaged mitochondria and maintaining the overall balance of intracellular mitochondria in quality and quantity. A previous study showed that PINK1 and Parkin were overexpressed in adipose tissue in obese subjects. However, it is still unclear whether a direct relationship exists between obesity and mitophagy. In this study, we created a high-fat-diet (HFD)-induced obese mouse model and examined the expression of PINK1 and Parkin in adipose tissue using western blot and real-time quantitative PCR. After we confirmed that there is an interesting difference between regular-chow-fed mice and HFD-induced obese mice in the expression of PINK1 and Parkin in vivo, we further tested the expression of PINK1 and Parkin in 3T3-L1 preadipocytes in vitro by treating cells with palmitic acid (PA) to induce metabolic stress. To better understand the role of PINK1 and Parkin in metabolic stress, 3T3-L1 preadipocytes were transfected with small interfering RNA (siRNA) of PINK1 and Parkin followed by PA treatment. Our results showed that under lower concentrations of PA, PINK1 and Parkin can be activated and play a protective role in resisting the harmful effects of PA, including protecting the mitochondrial function and resisting cellular death, while under higher concentrations of PA, the expression of PINK1 and Parkin can be inhibited. These results suggest that PINK1-Parkin can protect mitochondrial function against metabolic stress induced by obesity or PA to a certain degree. Copyright © 2018 Elsevier Inc. All rights reserved.

Mechanisms of mitophagy: PINK1, Parkin, USP30 and beyond.

PubMed

Bingol, Baris; Sheng, Morgan

2016-11-01

Mitochondrial quality control is central for maintaining a healthy population of mitochondria. Two Parkinson's disease genes, mitochondrial kinase PINK1 and ubiquitin ligase Parkin, degrade damaged mitochondria though mitophagy. In this pathway, PINK1 senses mitochondrial damage and activates Parkin by phosphorylating Parkin and ubiquitin. Activated Parkin then builds ubiquitin chains on damaged mitochondria to tag them for degradation in lysosomes. USP30 deubiquitinase acts as a brake on mitophagy by opposing Parkin-mediated ubiquitination. Human genetic data point to a role for mitophagy defects in neurodegenerative diseases. This review highlights the molecular mechanisms of the mitophagy pathway and the recent advances in the understanding of mitophagy in vivo. Copyright © 2016 Elsevier Inc. All rights reserved.

Structure of phosphorylated UBL domain and insights into PINK1-orchestrated parkin activation.

PubMed

Aguirre, Jacob D; Dunkerley, Karen M; Mercier, Pascal; Shaw, Gary S

2017-01-10

Mutations in PARK2 and PARK6 genes are responsible for the majority of hereditary Parkinson's disease cases. These genes encode the E3 ubiquitin ligase parkin and the protein kinase PTEN-induced kinase 1 (PINK1), respectively. Together, parkin and PINK1 regulate the mitophagy pathway, which recycles damaged mitochondria following oxidative stress. Native parkin is inactive and exists in an autoinhibited state mediated by its ubiquitin-like (UBL) domain. PINK1 phosphorylation of serine 65 in parkin's UBL and serine 65 of ubiquitin fully activate ubiquitin ligase activity; however, a structural rationale for these observations is not clear. Here, we report the structure of the phosphorylated UBL domain from parkin. We find that destabilization of the UBL results from rearrangements to hydrophobic core packing that modify its structure. Altered surface electrostatics from the phosphoserine group disrupt its intramolecular association, resulting in poorer autoinhibition in phosphorylated parkin. Further, we show that phosphorylation of both the UBL domain and ubiquitin are required to activate parkin by releasing the UBL domain, forming an extended structure needed to facilitate E2-ubiquitin binding. Together, the results underscore the importance of parkin activation by the PINK1 phosphorylation signal and provide a structural picture of the unraveling of parkin's ubiquitin ligase potential.

The effect of irradiation in the preservation of pink pepper (Schinus terebinthifolius Raddi)

NASA Astrophysics Data System (ADS)

de Souza, Adriana Régia Marques; Arthur, Valter; Nogueira, Danielle Pires

2012-08-01

Pink peppers, also known as "pimenta-rosa" and "poivre rose", are the fruit of Schinus terebinthifolius Raddi, a species of pepper cultivated in Brazil, and have great potential for the exploration of uses. In efforts to lengthen the shelf life of this pepper, the purpose of this study was to evaluate the effect of different doses of radiation on its physical composition and color. The pink pepper samples were irradiated with doses of 0, 0.2, 0.4, 0.8 and 1.6 kGy, and the moisture, ash and lipid contents, pH and color were analyzed. The moisture content, lipid content and pH analysis indicated effects due to the irradiation (p>0.05) in which the higher doses resulted in decreases in the attribute. In contrast, there were no significant differences for the ash analysis (p<0.05) among the studied doses. The color of the pink peppers were affected by the irradiation: the parameters a* and b* were the most affected by the intermediate doses (0.2 and 0.8 kGy), which induced their elevation, enhancing the reddish and yellowish colors. Based on the presented data, irradiation is as an alternative preservation process for pink peppers.

Real-time supervised detection of pink areas in dermoscopic images of melanoma: importance of color shades, texture and location.

PubMed

Kaur, R; Albano, P P; Cole, J G; Hagerty, J; LeAnder, R W; Moss, R H; Stoecker, W V

2015-11-01

Early detection of malignant melanoma is an important public health challenge. In the USA, dermatologists are seeing more melanomas at an early stage, before classic melanoma features have become apparent. Pink color is a feature of these early melanomas. If rapid and accurate automatic detection of pink color in these melanomas could be accomplished, there could be significant public health benefits. Detection of three shades of pink (light pink, dark pink, and orange pink) was accomplished using color analysis techniques in five color planes (red, green, blue, hue, and saturation). Color shade analysis was performed using a logistic regression model trained with an image set of 60 dermoscopic images of melanoma that contained pink areas. Detected pink shade areas were further analyzed with regard to the location within the lesion, average color parameters over the detected areas, and histogram texture features. Logistic regression analysis of a separate set of 128 melanomas and 128 benign images resulted in up to 87.9% accuracy in discriminating melanoma from benign lesions measured using area under the receiver operating characteristic curve. The accuracy in this model decreased when parameters for individual shades, texture, or shade location within the lesion were omitted. Texture, color, and lesion location analysis applied to multiple shades of pink can assist in melanoma detection. When any of these three details: color location, shade analysis, or texture analysis were omitted from the model, accuracy in separating melanoma from benign lesions was lowered. Separation of colors into shades and further details that enhance the characterization of these color shades are needed for optimal discrimination of melanoma from benign lesions. © 2015 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Pink1/Parkin-mediated mitophagy play a protective role in cisplatin induced renal tubular epithelial cells injury.

PubMed

Zhao, Chuanyan; Chen, Zhuyun; Xu, Xueqiang; An, Xiaofei; Duan, Suyan; Huang, Zhimin; Zhang, Chengning; Wu, Lin; Zhang, Bo; Zhang, Aihua; Xing, Changying; Yuan, Yanggang

2017-01-15

Cisplatin often causes acute kidney injury (AKI) in the treatment of a wide variety of malignancies. Mitochondrial dysfunction is one of the main reasons for cisplatin nephrotoxicity. Previous study showed that Pink1 and Parkin play central roles in regulating the mitophagy, which is a key protective mechanism by specifically eliminating dysfunctional or damaged mitochondria. However, the mechanisms that modulate mitophagy in cisplatin induced nephrotoxicity remain to be elucidated. The purpose of this study was to investigate the effects of Pink1/Parkin pathway in mitophagy, mitochondrial dysfunction and renal proximal tubular cells injury during cisplatin treatment. In cultured human renal proximal tubular cells, we found that knockdown of Pink1/Parkin induced the aggravation of mitochondrial function, leading to the increase of cell injury through inhibition of mitophagy. Additionally, the overexpression of Pink1/Parkin protected against cisplatin-induced mitochondrial dysfunction and cell injury by promoting mitophagy. Our results provide clear evidence that Pink1/Parkin-dependent mitophagy has identified potential targets for the treatment of cisplatin-induced AKI. Copyright © 2016 Elsevier Inc. All rights reserved.

Swim bladder function and buoyancy control in pink snapper (Pagrus auratus) and mulloway (Argyrosomus japonicus).

PubMed

Stewart, John; Hughes, Julian M

2014-04-01

Physoclist fish are able to regulate their buoyancy by secreting gas into their hydrostatic organ, the swim bladder, as they descend through the water column and by resorbing gas from their swim bladder as they ascend. Physoclists are restricted in their vertical movements due to increases in swim bladder gas volume that occur as a result of a reduction in hydrostatic pressure, causing fish to become positively buoyant and risking swim bladder rupture. Buoyancy control, rates of swim bladder gas exchange and restrictions to vertical movements are little understood in marine teleosts. We used custom-built hyperbaric chambers and laboratory experiments to examine these aspects of physiology for two important fishing target species in southern Australia, pink snapper (Pagrus auratus) and mulloway (Argyrosomus japonicus). The swim bladders of pink snapper and mulloway averaged 4.2 and 4.9 % of their total body volumes, respectively. The density of pink snapper was not significantly different to the density of seawater (1.026 g/ml), whereas mulloway were significantly denser than seawater. Pink snapper secreted gas into their swim bladders at a rate of 0.027 ± 0.005 ml/kg/min (mean ± SE), almost 4 times faster than mulloway (0.007 ± 0.001 ml/kg/min). Rates of swim bladder gas resorption were 11 and 6 times faster than the rates of gas secretion for pink snapper and mulloway, respectively. Pink snapper resorbed swim bladder gas at a rate of 0.309 ± 0.069 ml/kg/min, 7 times faster than mulloway (0.044 ± 0.009 ml/kg/min). Rates of gas exchange were not affected by water pressure or water temperature over the ranges examined in either species. Pink snapper were able to acclimate to changes in hydrostatic pressure reasonably quickly when compared to other marine teleosts, taking approximately 27 h to refill their swim bladders from empty. Mulloway were able to acclimate at a much slower rate, taking approximately 99 h to refill their swim bladders. We estimated that the

Population genetic study in ten endogamous groups of West Bengal, India.

PubMed

Mukherjee, B N; Walter, H; Malhotra, K C; Chakraborty, R; Sauber, P; Banerjee, S; Roy, M

1987-09-01

Ten endogamous population groups of West Bengal (India)--Rabhas, Garos, Mechs, Rajbanshis, Jalia Kaibartas, Bagdis, Lodhas, Mundas, Brahmins, Vaidyas--have been typed for twelve polymorphic systems: ABO, Gm, Km, Hp, Cp, Tf, Alb, Hb, aP, EsD, AK and PGM1. The results are compared with those obtained on other Indian populations. Serological and anthropometric data, which have been included into population comparisons, reveal a considerable genetic variability of the groups under study. This variability is obviously connected with the population history of West Bengal.

Stabilizing Oils from Smoked Pink Salmon (Oncorhynchus gorbuscha)

USDA-ARS?s Scientific Manuscript database

Smoking of meats and fish is one of the earliest preservation technologies developed by humans. In this study, the smoking process was evaluated as a method for reducing oxidation of Pink Salmon (Oncorhynchus gorbuscha) oils and also maintaining the quality of oil in aged fish prior to oil extractio...

Identification of candidate amino acids involved in the formation of pink-red pigments in onion (Allium cepa L.) juice and separation by HPLC.

PubMed

Lee, Eun Jin; Yoo, Kil Sun; Patil, Bhimanagouda S

2010-10-01

The formation of pink-red pigments ("pinking") by various amino acids was investigated by reacting amino acids with compounds present in onion juice. The unknown pink-red pigments were generated and separated using high-performance liquid chromatography (HPLC) and a diode array detector (DAD) in the range of 200 to 700 nm. To generate pink-red pigments, we developed several reaction systems using garlic alliinase, purified 1-propenyl-L-cysteine sulfoxide (1-PeCSO), onion thiosulfinate, natural onion juice, and 21 free amino acids. The compound 1-PeCSO was a key compound associated with pinking in the presence of both the alliinase and amino acids. Numerous naturally occurring pink-red pigments were detected and separated from pink onion juice using the HPLC-DAD system at 515 nm. Most free amino acids, with the exceptions of histidine, serine, and cysteine, formed various pink-red pigments when reacted with onion thiosulfinate. This observation indicated that onion pinking is caused not by a single pigment, but by many. Furthermore, more than one color compound could be produced from a single amino acid; this explains, in part, why there were many pink-red compound peaks in the chromatogram of discolored natural onion juice. We presumed that the complexity of the pink-red pigments was due to the involvement of more than 21 natural amino acids as well as several derivatives of the color products produced from each amino acid. We observed that the pinking process in onion juice is very similar to that of the greening process in crushed garlic, emphasizing that both thiosulfinate from flavor precursors and free amino acids are absolutely required for the discoloration.

Parkin-catalyzed Ubiquitin-Ester Transfer Is Triggered by PINK1-dependent Phosphorylation*

PubMed Central

Iguchi, Masahiro; Kujuro, Yuki; Okatsu, Kei; Koyano, Fumika; Kosako, Hidetaka; Kimura, Mayumi; Suzuki, Norihiro; Uchiyama, Shinichiro; Tanaka, Keiji; Matsuda, Noriyuki

2013-01-01

PINK1 and PARKIN are causal genes for autosomal recessive familial Parkinsonism. PINK1 is a mitochondrial Ser/Thr kinase, whereas Parkin functions as an E3 ubiquitin ligase. Under steady-state conditions, Parkin localizes to the cytoplasm where its E3 activity is repressed. A decrease in mitochondrial membrane potential triggers Parkin E3 activity and recruits it to depolarized mitochondria for ubiquitylation of mitochondrial substrates. The molecular basis for how the E3 activity of Parkin is re-established by mitochondrial damage has yet to be determined. Here we provide in vitro biochemical evidence for ubiquitin-thioester formation on Cys-431 of recombinant Parkin. We also report that Parkin forms a ubiquitin-ester following a decrease in mitochondrial membrane potential in cells, and that this event is essential for substrate ubiquitylation. Importantly, the Parkin RING2 domain acts as a transthiolation or acyl-transferring domain rather than an E2-recruiting domain. Furthermore, formation of the ubiquitin-ester depends on PINK1 phosphorylation of Parkin Ser-65. A phosphorylation-deficient mutation completely inhibited formation of the Parkin ubiquitin-ester intermediate, whereas phosphorylation mimics, such as Ser to Glu substitution, enabled partial formation of the intermediate irrespective of Ser-65 phosphorylation. We propose that PINK1-dependent phosphorylation of Parkin leads to the ubiquitin-ester transfer reaction of the RING2 domain, and that this is an essential step in Parkin activation. PMID:23754282

Evidence of Olfactory Imprinting at an Early Life Stage in Pink Salmon (Oncorhynchus gorbuscha)

PubMed Central

Bett, Nolan N.; Hinch, Scott G.; Dittman, Andrew H.; Yun, Sang-Seon

2016-01-01

Pacific salmon (Oncorhynchus spp.) navigate towards spawning grounds using olfactory cues they imprinted on as juveniles. The timing at which imprinting occurs has been studied extensively, and there is strong evidence that salmon imprint on their natal water during the parr-smolt transformation (PST). Researchers have noted, however, that the life histories of some species of Pacific salmon could necessitate imprinting prior to the PST. Juvenile pink salmon (O. gorbuscha) spend less time in fresh water than any other species of Pacific salmon, and presumably must imprint on their natal water at a very young age. The time at which imprinting occurs in this species, however, has not been experimentally tested. We exposed juvenile pink salmon as alevins to phenethyl alcohol (PEA) or control water, reared these fish to adulthood, and then tested their behavioural responses to PEA to determine whether the fish successfully imprinted. We found that pink salmon exposed to PEA as alevins were attracted to the chemical as adults, suggesting that imprinting can occur during this stage. Our finding provides some of the first evidence to support the long-standing belief that imprinting can occur in pink salmon prior to the PST. PMID:27827382

Evidence of Olfactory Imprinting at an Early Life Stage in Pink Salmon (Oncorhynchus gorbuscha).

PubMed

Bett, Nolan N; Hinch, Scott G; Dittman, Andrew H; Yun, Sang-Seon

2016-11-09

Pacific salmon (Oncorhynchus spp.) navigate towards spawning grounds using olfactory cues they imprinted on as juveniles. The timing at which imprinting occurs has been studied extensively, and there is strong evidence that salmon imprint on their natal water during the parr-smolt transformation (PST). Researchers have noted, however, that the life histories of some species of Pacific salmon could necessitate imprinting prior to the PST. Juvenile pink salmon (O. gorbuscha) spend less time in fresh water than any other species of Pacific salmon, and presumably must imprint on their natal water at a very young age. The time at which imprinting occurs in this species, however, has not been experimentally tested. We exposed juvenile pink salmon as alevins to phenethyl alcohol (PEA) or control water, reared these fish to adulthood, and then tested their behavioural responses to PEA to determine whether the fish successfully imprinted. We found that pink salmon exposed to PEA as alevins were attracted to the chemical as adults, suggesting that imprinting can occur during this stage. Our finding provides some of the first evidence to support the long-standing belief that imprinting can occur in pink salmon prior to the PST.

Reactive oxygen species trigger Parkin/PINK1 pathway-dependent mitophagy by inducing mitochondrial recruitment of Parkin.

PubMed

Xiao, Bin; Goh, Jian-Yuan; Xiao, Lin; Xian, Hongxu; Lim, Kah-Leong; Liou, Yih-Cherng

2017-10-06

Defective mitophagy linked to dysfunction in the proteins Parkin and PTEN-induced putative kinase 1 (PINK1) is implicated in the pathogenesis of Parkinson's disease. Although the mechanism by which Parkin mediates mitophagy in a PINK1-dependent manner is becoming clearer, the triggers for this mitophagy pathway remain elusive. Reactive oxygen species (ROS) have been suggested as such triggers, but this proposal remains controversial because ROS scavengers fail to retard mitophagy. Here we demonstrate that the role of ROS in mitophagy has been underappreciated as a result of the inefficiency of ROS scavengers to control ROS bursts after high-dose treatment with carbonyl cyanide m -chlorophenylhydrazone. Supporting this, combinatorial treatment with N -acetyl-l-cysteine and catalase substantially inhibited the ROS upsurge and PINK1-dependent Parkin translocation to mitochondria in response to carbonyl cyanide m -chlorophenylhydrazone treatment. In addition to the chemical mitophagy inducer, overexpression of voltage-dependent anion channel 1 (VDAC1) induced Parkin translocation to mitochondria, presumably by stimulating ROS generation. Similarly, combined N -acetyl-l-cysteine and catalase treatment also suppressed VDAC1-induced redistribution of Parkin. Alongside these observations, we also found that the elevated protein level of PINK1 was not necessary for Parkin translocation to mitochondria. Thus, our data suggest that ROS may act as a trigger for the induction of Parkin/PINK1-dependent mitophagy. In addition, our study casts doubt on the importance of protein quantity of PINK1 in the recruitment of Parkin to mitochondria. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Constitutive Activation of PINK1 Protein Leads to Proteasome-mediated and Non-apoptotic Cell Death Independently of Mitochondrial Autophagy*

PubMed Central

Akabane, Shiori; Matsuzaki, Kohei; Yamashita, Shun-ichi; Arai, Kana; Okatsu, Kei; Kanki, Tomotake; Matsuda, Noriyuki; Oka, Toshihiko

2016-01-01

Phosphatase and tensin homolog-induced putative kinase 1 (PINK1), a Ser/Thr kinase, and PARKIN, a ubiquitin ligase, are causal genes for autosomal recessive early-onset parkinsonism. Multiple lines of evidence indicate that PINK1 and PARKIN cooperatively control the quality of the mitochondrial population via selective degradation of damaged mitochondria by autophagy. Here, we report that PINK1 and PARKIN induce cell death with a 12-h delay after mitochondrial depolarization, which differs from the time profile of selective autophagy of mitochondria. This type of cell death exhibited definite morphologic features such as plasma membrane rupture, was insensitive to a pan-caspase inhibitor, and did not involve mitochondrial permeability transition. Expression of a constitutively active form of PINK1 caused cell death in the presence of a pan-caspase inhibitor, irrespective of the mitochondrial membrane potential. PINK1-mediated cell death depended on the activities of PARKIN and proteasomes, but it was not affected by disruption of the genes required for autophagy. Furthermore, fluorescence and electron microscopic analyses revealed that mitochondria were still retained in the dead cells, indicating that PINK1-mediated cell death is not caused by mitochondrial loss. Our findings suggest that PINK1 and PARKIN play critical roles in selective cell death in which damaged mitochondria are retained, independent of mitochondrial autophagy. PMID:27302064

Deficit irrigation reduces postharvest rib pinking in wholehead Iceberg lettuce, but at the expense of head fresh weight.

PubMed

Monaghan, James M; Vickers, Laura H; Grove, Ivan G; Beacham, Andrew M

2017-03-01

Postharvest pinking is a serious issue affecting lettuce quality. Previous studies suggested the possibility of using deficit irrigation to control discolouration; however, this approach may also affect yield. This study investigated the effect of varying irrigation deficits on iceberg lettuce (Lactuca sativa L.) to determine the relationship between irrigation deficit, pinking and fresh weight. The deficit imposed and head fresh weight obtained depended on both the duration and timing of withholding irrigation. Withholding irrigation for a period of 2 or 3 weeks in the middle or end of the growth period significantly reduced rib pinking compared to well-watered controls. Withholding irrigation for 2 weeks at the start of the growth period or 1 week at the end did not significantly reduce pinking. Withholding irrigation also reduced head fresh weight such that minimising pinking would be predicted to incur a loss of 40% relative to well-watered controls. However, smaller benefits to pinking reduction were achieved with less effect on head fresh weight. Deficit irrigation could be used to provide smaller but higher quality heads which are less likely to be rejected. The balance of these factors will determine the degree of adoption of this approach to growers. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

"Pink" Full Moon and Partial Lunar Eclipse on April 25, 2013

NASA Image and Video Library

2017-12-08

Share YOUR pink moon and/or partial lunar eclipse images in our Flickr Group here: www.flickr.com/groups/pinkmoon/ TimeThursday, April 25, 2013, 21:00 UT Phase 100.0% Diameter - 1962.6 arcseconds Distance - 365185 km (28.66 Earth diameters There is a special lunar name for every full moon in a year. The April 25 full moon is known as the “Full Pink Moon” because of the grass pink – or wild ground phlox – flower, which is one of the earliest widespread flowers to bloom in the spring. This month’s full moon is also known as the Sprouting Grass moon and the Egg moon. The first lunar eclipse of 2013 occurs at the Moon's ascending node in southern Virgo about 12° east of Spica (mv = +1.05). It is visible primarily from the Eastern Hemisphere. This event will not be visible in North America, it will only be visible from Eastern Europea, Africa, Asia, and Western Australia. April’s full moon, which is set to rise tonight, is known as a pink moon. And this year it coincides with the partial lunar eclipse. This NASA animation shows elevation measurements by the Lunar Orbiter Laser Altimeter (LOLA) aboard the Lunar Reconnaissance Orbiter (LRO). Credit: NASA/Goddard Space Flight Center Scientific Visualization Studio NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reysenbach, A.L.; Wickham, G.S.; Pace, N.R.

1994-06-01

This study uses a molecular phylogenetic approach to characterize the pink filament community at the outflow of Octopus Spring in Yellowstone National Park. The temperature range of the spring is from 84 to 88 C. The authors show that the pink filaments are most closely related to the hydrogen-oxidizing bacterium Aquifex pyrophilus and a close relative Hydrogenobacter thermophilus. 38 refs., 4 figs., 1 tab.

A new spontaneous allele at the pink-eyed dilution (p) locus discovered in Mus musculus castaneus.

PubMed

Tsuji, A; Wakayama, T; Ishikawa, A

1995-10-01

Mutant mice characterized by a cream coat and pink eyes were spontaneously discovered among the descendants of Indonesian wild mice (Mus musculus castaneus). This mutant phenotype was controlled by a single autosomal recessive gene that was allelic to the pink-eyed dilution (p) gene. The mutant mouse phenotypically resembled the original p mouse which was the first mutant identified at this locus. Nevertheless, these two alleles differed in origin, a previous report suggesting that the original p allele was derived from Japanese wild mice (M. m. molossinus). Thus the symbol pcas (pink-eyed castaneus) was proposed for the present mutation allele.

Revisiting the Pink Triangle Exercise: An Exploration of Experiential Learning in Graduate Social Work Education

ERIC Educational Resources Information Center

Pugh, Greg L.

2014-01-01

The pink triangle exercise is an example of an experiential learning exercise that creates cognitive dissonance and deep learning of unrealized internalized biases among social work students. Students wear a button with a pink triangle on it for 1 day and write a reflection paper. The exercise increases self-awareness, cultural competence, and the…

Role of PINK1 binding to the TOM complex and alternate intracellular membranes in recruitment and activation of the E3 ligase Parkin.

PubMed

Lazarou, Michael; Jin, Seok Min; Kane, Lesley A; Youle, Richard J

2012-02-14

Mutations in the mitochondrial kinase PINK1 and the cytosolic E3 ligase Parkin can cause Parkinson's disease. Damaged mitochondria accumulate PINK1 on the outer membrane where, dependent on kinase activity, it recruits and activates Parkin to induce mitophagy, potentially maintaining organelle fidelity. How PINK1 recruits Parkin is unknown. We show that endogenous PINK1 forms a 700 kDa complex with the translocase of the outer membrane (TOM) selectively on depolarized mitochondria whereas PINK1 ectopically targeted to the outer membrane retains association with TOM on polarized mitochondria. Inducibly targeting PINK1 to peroxisomes or lysosomes, which lack a TOM complex, recruits Parkin and activates ubiquitin ligase activity on the respective organelles. Once there, Parkin induces organelle selective autophagy of peroxisomes but not lysosomes. We propose that the association of PINK1 with the TOM complex allows rapid reimport of PINK1 to rescue repolarized mitochondria from mitophagy, and discount mitochondrial-specific factors for Parkin translocation and activation. Copyright © 2012 Elsevier Inc. All rights reserved.

Motivated to Learn: A Conversation with Daniel Pink

ERIC Educational Resources Information Center

Azzam, Amy M.

2014-01-01

The author has looked at four decades of scientific research on human motivation and found a mismatch between what science tells us and what organizations actually do. In this interview with "Educational Leadership," Pink shares his insights on how schools can create more optimal conditions for learning--and how they can dial up…

PINK1, Parkin, and Mitochondrial Quality Control: What can we Learn about Parkinson's Disease Pathobiology?

PubMed

Truban, Dominika; Hou, Xu; Caulfield, Thomas R; Fiesel, Fabienne C; Springer, Wolfdieter

2017-01-01

The first clinical description of Parkinson's disease (PD) will embrace its two century anniversary in 2017. For the past 30 years, mitochondrial dysfunction has been hypothesized to play a central role in the pathobiology of this devastating neurodegenerative disease. The identifications of mutations in genes encoding PINK1 (PTEN-induced kinase 1) and Parkin (E3 ubiquitin ligase) in familial PD and their functional association with mitochondrial quality control provided further support to this hypothesis. Recent research focused mainly on their key involvement in the clearance of damaged mitochondria, a process known as mitophagy. It has become evident that there are many other aspects of this complex regulated, multifaceted pathway that provides neuroprotection. As such, numerous additional factors that impact PINK1/Parkin have already been identified including genes involved in other forms of PD. A great pathogenic overlap amongst different forms of familial, environmental and even sporadic disease is emerging that potentially converges at the level of mitochondrial quality control. Tremendous efforts now seek to further detail the roles and exploit PINK1 and Parkin, their upstream regulators and downstream signaling pathways for future translation. This review summarizes the latest findings on PINK1/Parkin-directed mitochondrial quality control, its integration and cross-talk with other disease factors and pathways as well as the implications for idiopathic PD. In addition, we highlight novel avenues for the development of biomarkers and disease-modifying therapies that are based on a detailed understanding of the PINK1/Parkin pathway.

Tiger, Bengal and Domestic Cat Embryos Produced by Homospecific and Interspecific Zona-Free Nuclear Transfer.

PubMed

Moro, L N; Jarazo, J; Buemo, C; Hiriart, M I; Sestelo, A; Salamone, D F

2015-10-01

The aim of this study was to evaluate three different cloning strategies in the domestic cat (Felis silvestris) and to use the most efficient to generate wild felid embryos by interspecific cloning (iSCNT) using Bengal (a hybrid formed by the cross of Felis silvestris and Prionailurus bengalensis) and tiger (Panthera tigris) donor cells. In experiment 1, zona-free (ZP-free) cloning resulted in higher fusion and expanded blastocyst rates with respect to zona included cloning techniques that involved fusion or injection of the donor cell. In experiment 2, ZP-free iSCNT and embryo aggregation (2X) were assessed. Division velocity and blastocyst rates were increased by embryo aggregation in the three species. Despite fewer tiger embryos than Bengal and cat embryos reached the blastocyst stage, Tiger 2X group increased the percentage of blastocysts with respect to Tiger 1X group (3.2% vs 12.1%, respectively). Moreover, blastocyst cell number was almost duplicated in aggregated embryos with respect to non-aggregated ones within Bengal and tiger groups (278.3 ± 61.9 vs 516.8 ± 103.6 for Bengal 1X and Bengal 2X groups, respectively; 41 vs 220 ± 60 for Tiger 1X and Tiger 2X groups, respectively). OCT4 analysis also revealed that tiger blastocysts had higher proportion of OCT4-positive cells with respect to Bengal blastocysts and cat intracytoplasmic sperm injection blastocysts. In conclusion, ZP-free cloning has improved the quality of cat embryos with respect to the other cloning techniques evaluated and was successfully applied in iSCNT complemented with embryo aggregation. © 2015 Blackwell Verlag GmbH.

Three Pink Decades: Breast Cancer Coverage in Magazine Advertisements.

PubMed

AbiGhannam, Niveen; Chilek, Lindsay A; Koh, Hyeseung E

2018-04-01

Breast cancer advocacy has experienced tremendous success since the 1980s. Yet, the quality and authenticity of breast cancer information in the media are sometimes questionable. Using a content analysis, we examined the informative (donation information, breast cancer advocacy content, etc.) and persuasive (appeals used, cues to action, etc.) contents of magazine advertisements relevant to breast cancer. While ads offered minimal informative content about the disease or about ways by which sales will contribute to the breast cancer cause, they integrated "breast cancer appeals," such as the color pink, the pink ribbon, and mostly positive depictions of survivorship and hope, into the ads. Breast cancer thus took center stage in the persuasive content of the ads, but a back seat when it came to their informative content. We discuss the implications of those findings in light of the meanings and purposes of cause-related marketing campaigns.

Geomagnetic imprinting predicts spatio-temporal variation in homing migration of pink and sockeye salmon

PubMed Central

Putman, Nathan F.; Jenkins, Erica S.; Michielsens, Catherine G. J.; Noakes, David L. G.

2014-01-01

Animals navigate using a variety of sensory cues, but how each is weighted during different phases of movement (e.g. dispersal, foraging, homing) is controversial. Here, we examine the geomagnetic and olfactory imprinting hypotheses of natal homing with datasets that recorded variation in the migratory routes of sockeye (Oncorhynchus nerka) and pink (Oncorhynchus gorbuscha) salmon returning from the Pacific Ocean to the Fraser River, British Columbia. Drift of the magnetic field (i.e. geomagnetic imprinting) uniquely accounted for 23.2% and 44.0% of the variation in migration routes for sockeye and pink salmon, respectively. Ocean circulation (i.e. olfactory imprinting) predicted 6.1% and 0.1% of the variation in sockeye and pink migration routes, respectively. Sea surface temperature (a variable influencing salmon distribution but not navigation, directly) accounted for 13.0% of the variation in sockeye migration but was unrelated to pink migration. These findings suggest that geomagnetic navigation plays an important role in long-distance homing in salmon and that consideration of navigation mechanisms can aid in the management of migratory fishes by better predicting movement patterns. Finally, given the diversity of animals that use the Earth's magnetic field for navigation, geomagnetic drift may provide a unifying explanation for spatio-temporal variation in the movement patterns of many species. PMID:25056214

An Intrathermocline Eddy and a tropical cyclone in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Gordon, Arnold L.; Shroyer, Emily; Murty, V. S. N.

2017-04-01

The Bay of Bengal, subjected to monsoonal forcing and tropical cyclones, displays a complex field of ocean eddies. On 5 December 2013 a sub-surface vortex or Intrathermocline Eddy (ITE) composed of water characteristic of the Andaman Sea was observed within the thermocline of the western Bay of Bengal. We propose that the ITE was the product of Tropical Cyclone Lehar interaction on 27 November 2013 with a westward propagating surface eddy from the eastern Bay of Bengal. While Lehar’s interaction with the ocean initially removes heat from the upper layers of the eddy, air-sea flux is limited as the deeper portions of the eddy was subducted into the stratified thermocline, inhibiting further interaction with the atmosphere. The ITE core from 30 to 150 m is thus isolated from local air-sea fluxes by strong stratification at the mixed layer base, and its periphery is stable to shear instability, suggestive of longevity and the ability to carry water far distances with minimal modification.

An Intrathermocline Eddy and a tropical cyclone in the Bay of Bengal.

PubMed

Gordon, Arnold L; Shroyer, Emily; Murty, V S N

2017-04-12

The Bay of Bengal, subjected to monsoonal forcing and tropical cyclones, displays a complex field of ocean eddies. On 5 December 2013 a sub-surface vortex or Intrathermocline Eddy (ITE) composed of water characteristic of the Andaman Sea was observed within the thermocline of the western Bay of Bengal. We propose that the ITE was the product of Tropical Cyclone Lehar interaction on 27 November 2013 with a westward propagating surface eddy from the eastern Bay of Bengal. While Lehar's interaction with the ocean initially removes heat from the upper layers of the eddy, air-sea flux is limited as the deeper portions of the eddy was subducted into the stratified thermocline, inhibiting further interaction with the atmosphere. The ITE core from 30 to 150 m is thus isolated from local air-sea fluxes by strong stratification at the mixed layer base, and its periphery is stable to shear instability, suggestive of longevity and the ability to carry water far distances with minimal modification.

Laser removal of graffiti from Pink Morelia Quarry

NASA Astrophysics Data System (ADS)

Penide, J.; Quintero, F.; Riveiro, A.; Sánchez-Castillo, A.; Comesaña, R.; del Val, J.; Lusquiños, F.; Pou, J.

2013-11-01

Morelia is an important city sited in Mexico. Its historical center reflects most of their culture and history, especially of the colonial period; in fact, it was appointed World Heritage Site by UNESCO. Sadly, there is a serious problem with graffiti in Morelia and its historical center is the worst affected since its delicate charming is definitely damaged. Hitherto, the conventional methods employed to remove graffiti from Pink Morelia Quarry (the most used building stone in Morelia) are quite aggressive to the appearance of the monuments, so actually, they are not a very good solution. In this work, we performed a study on the removal of graffiti from Pink Morelia Quarry by high power diode laser. We carried out an extensive experimental study looking for the optimal processing parameters, and compared a single-pass with a multi-pass method. Indeed, we achieved an effective cleaning without producing serious side effects in the stone. In conclusion, the multi-pass method emitting in continuous wave was revealed as the more effective operating modes to remove the graffiti.

Common variants in the PARL and PINK1 genes increase the risk to leprosy in Han Chinese from South China.

PubMed

Wang, Dong; Zhang, Deng-Feng; Feng, Jia-Qi; Li, Guo-Dong; Li, Xiao-An; Yu, Xiu-Feng; Long, Heng; Li, Yu-Ye; Yao, Yong-Gang

2016-11-23

Leprosy is a chronic infectious and neurological disease caused by Mycobacterium leprae, an unculturable pathogen with massive genomic decay and dependence on host metabolism. We hypothesized that mitochondrial genes PARL and PINK1 would confer risk to leprosy. Thirteen tag SNPs of PARL and PINK1 were analyzed in 3620 individuals with or without leprosy from China. We also sequenced the entire exons of PARL, PINK1 and PARK2 in 80 patients with a family history of leprosy by using the next generation sequencing technology (NGS). We found that PARL SNP rs12631031 conferred a risk to leprosy (P adjusted  = 0.019) and multibacillary leprosy (MB, P adjusted  = 0.020) at the allelic level. rs12631031 and rs7653061 in PARL were associated with leprosy and MB (dominant model, P adjusted  < 0.05) at the genotypic level. PINK1 SNP rs4704 was associated with leprosy at the genotypic level (P adjusted  = 0.004). We confirmed that common variants in PARL and PINK1 were associated with leprosy in patients underwent NGS. Furthermore, PARL and PINK1 could physically interact with each other and were involved in the highly connected network formed by reported leprosy susceptibility genes. Together, our results showed that PARL and PINK1 genetic variants are associated with leprosy.

Positive deviance--the West Bengal experience.

PubMed

Mustaphi, P; Dobe, M

2005-01-01

There are 11.1 million children in the age group 0-6 years in West Bengal. Of these, every second child under 3 years of age is underweight, more than four out of ten are stunted, and one out of eight are wasted. The Integrated Child Development Services (ICDS) programme in West Bengal has 355 operational projects covering 53,064 operational anganwadi centers reaching out to more than four million beneficiaries--approximately half of whom are children in the age group 0-3 years. The Department of Women and Child Development (DWCD) is trying to identify and replicate innovative, community-based, sustainable approaches. One such innovative initiative has been the "Keno Parbo Na" project based on the Positive Deviance (PD) approach which aims to reduce and prevent malnutrition among children under 3 years of age by focusing on local solutions and resources, local behaviors and practices. Behavior change is emphasized through participatory learning and community mobilization. The pilot phase of the project has been completed in two districts [Four blocks (2 in each District) and 32 villages/AWCs (8 in each block)] of West Bengal (Murshidabad and South 24 Parganas). The analysis of the project activities so far reveals that the issue of malnutrition and its prevention is now visible in the villages covered. Acceptance of desirable behavioral practices is observed within the community. A steady reduction in the moderate and severe level of malnutrition was noted across four districts. A general preponderance of girl children was noted at the entry stage indicating higher levels of severe and moderate malnutrition among girl children to begin with but also suggesting PD as an important strategy in reducing the gender gap in malnutrition. The boys gain in terms of nutritional status faster than the girls so in the intermediate phase malnourished girls are more in number. However, by the sixth / ninth round, as the malnutrition levels decline substantially, the gender gap

The Bay of Bengal : an ideal laboratory for studying salinity

NASA Astrophysics Data System (ADS)

Vialard, jerome; Lengaigne, Matthieu; Akhil, Valiya; Chaitanya, Akurathi; Krishna-Mohan, Krishna; D'Ovidio, Francesco; Keerthi, Madhavan; Benshila, Rachid; Durand, Fabien; Papa, Fabrice; Suresh, Iyappan; Neetu, Singh

2017-04-01

The Bay of Bengal combines several unique features that make it an excellent laboratory to study the variability of salinity and its potential effects on the oceanic circulation and climate. This basin receives very large quantities of freshwater in association to the southwest monsoon, either directly from rain or indirectly through the runoffs of the Ganges-Brahmaputra and Irrawaddy. This large quantity of freshwater in a small, semi enclosed basin results in some of the lowest sea surface salinities (SSS) and strongest near-surface haline stratification in the tropical band. The strong monsoon winds also drive an energetic circulation, which exports the excess water received during the monsoon and results in strong horizontal salinity gradients. In this talk, I will summarize several studies of the Bay of Bengal salinity variability and its impacts undertaken in the context of an Indo-French collaboration. In situ data collected along the coast by fishermen and model results show that the intense, coastally-trapped East India Coastal Current (EICC) transports the very fresh water near the Ganges-Brahmaputra river mouth along the eastern Bay of Bengal rim to create a narrow, very fresh "river in the sea" after the southwest monsoon. The salinity-induced pressure gradient contributes to almost 50% of the EICC intensity and sustains mesoscale eddy generation through its effect on horizontal current shears and baroclinic gradients. Oceanic eddies play a strong role in exporting this fresh water from the coast to the basin interior. This "river in the sea" has a strong interannual variability related to the EICC remote modulation by the Indian Ocean Dipole (a regional climate mode). I will also discuss the potential effect of haline stratification on the regional climate through its influence on the upper ocean budget. Finally, I will briefly discuss the performance of remote-sensing for observing SSS in the Bay of Bengal.

Loss of PINK1 attenuates HIF-1α induction by preventing 4E-BP1-dependent switch in protein translation under hypoxia.

PubMed

Lin, William; Wadlington, Natasha L; Chen, Linan; Zhuang, Xiaoxi; Brorson, James R; Kang, Un Jung

2014-02-19

Parkinson's disease (PD) has multiple proposed etiologies with implication of abnormalities in cellular homeostasis ranging from proteostasis to mitochondrial dynamics to energy metabolism. PINK1 mutations are associated with familial PD and here we discover a novel PINK1 mechanism in cellular stress response. Using hypoxia as a physiological trigger of oxidative stress and disruption in energy metabolism, we demonstrate that PINK1(-/-) mouse cells exhibited significantly reduced induction of HIF-1α protein, HIF-1α transcriptional activity, and hypoxia-responsive gene upregulation. Loss of PINK1 impairs both hypoxia-induced 4E-BP1 dephosphorylation and increase in the ratio of internal ribosomal entry site (IRES)-dependent to cap-dependent translation. These data suggest that PINK1 mediates adaptive responses by activating IRES-dependent translation, and the impairments in translation and the HIF-1α pathway may contribute to PINK1-associated PD pathogenesis that manifests under cellular stress.

Pink salmon ( Oncorhynchus gorbuscha) marine survival rates reflect early marine carbon source dependency

NASA Astrophysics Data System (ADS)

Kline, Thomas C., Jr.; Boldt, Jennifer L.; Farley, Edward V., Jr.; Haldorson, Lewis J.; Helle, John H.

2008-05-01

Marine survival rate (the number of adult salmon returning divided by the number of salmon fry released) of pink salmon runs propagated by Prince William Sound, Alaska (PWS) salmon hatcheries is highly variable resulting in large year-to-year run size variation, which ranged from ∼20 to ∼50 million during 1998-2004. Marine survival rate was hypothesized to be determined during their early marine life stage, a time period corresponding to the first growing season after entering the marine environment while they are still in coastal waters. Based on the predictable relationships of 13C/ 12C ratios in food webs and the existence of regional 13C/ 12C gradients in organic carbon, 13C/ 12C ratios of early marine pink salmon were measured to test whether marine survival rate was related to food web processes. Year-to-year variation in marine survival rate was inversely correlated to 13C/ 12C ratios of early marine pink salmon, but with differences among hatcheries. The weakest relationship was for pink salmon from the hatchery without historic co-variation of marine survival rate with other PWS hatcheries or wild stocks. Year-to-year variation in 13C/ 12C ratio of early marine stage pink salmon in combination with regional spatial gradients of 13C/ 12C ratio measured in zooplankton suggested that marine survival was driven by carbon subsidies of oceanic origin (i.e., oceanic zooplankton). The 2001 pink salmon cohort had 13C/ 12C ratios that were very similar to those found for PWS carbon, i.e., when oceanic subsidies were inferred to be nil, and had the lowest marine survival rate (2.6%). Conversely, the 2002 cohort had the highest marine survival (9.7%) and the lowest mean 13C/ 12C ratio. These isotope patterns are consistent with hypotheses that oceanic zooplankton subsidies benefit salmon as food subsidies, or as alternate prey for salmon predators. Oceanic subsidies are manifestations of significant exchange of material between PWS and the Gulf of Alaska. Given

Superoxide dismutating molecules rescue the toxic effects of PINK1 and parkin loss.

PubMed

Biosa, Alice; Sanchez-Martinez, Alvaro; Filograna, Roberta; Terriente-Felix, Ana; Alam, Sarah M; Beltramini, Mariano; Bubacco, Luigi; Bisaglia, Marco; Whitworth, Alexander J

2018-05-01

Reactive oxygen species exert important functions in regulating several cellular signalling pathways. However, an excessive accumulation of reactive oxygen species can perturb the redox homeostasis leading to oxidative stress, a condition which has been associated to many neurodegenerative disorders. Accordingly, alterations in the redox state of cells and mitochondrial homeostasis are established hallmarks in both familial and sporadic Parkinson's disease cases. PINK1 and Parkin are two genes which account for a large fraction of autosomal recessive early-onset forms of Parkinson's disease and are now firmly associated to both mitochondria and redox homeostasis. In this study we explored the hypothesis that superoxide anions participate in the generation of the Parkin and PINK1 associated phenotypic effect by testing the capacity of endogenous and exogenous superoxide dismutating molecules to rescue the toxic effects induced by loss of PINK1 or Parkin, in both cellular and fly models. Our results demonstrate the positive effect of an increased level of superoxide dismutase proteins on the pathological phenotypes, both in vitro and in vivo. A more pronounced effectiveness for mitochondrial SOD2 activity points to the superoxide radicals generated in the mitochondrial matrix as the prime suspect in the definition of the observed phenotypes. Moreover, we also demonstrate the efficacy of a SOD-mimetic compound, M40403, to partially ameliorate PINK1/Parkin phenotypes in vitro and in vivo. These results support the further exploration of SOD-mimetic compounds as a therapeutic strategy against Parkinson's disease.

PGAM5 regulates PINK1/Parkin-mediated mitophagy via DRP1 in CCCP-induced mitochondrial dysfunction.

PubMed

Park, Yun Sun; Choi, Su Eun; Koh, Hyun Chul

2018-03-01

Mitochondrial dynamics and mitophagy are critical processes for regulating mitochondrial homeostasis. Phosphoglycerate mutase family member 5 (PGAM5) is a mitochondrial protein that plays crucial roles in apoptosis and necroptosis, but the roles of PGAM5 in mitochondrial dynamics and mitophagy remain unclear. In this study, we investigated the role of PGAM5 in carbonyl cyanide m-chlorophenylhydrazone (CCCP)-induced mitochondrial damage and the correlation between mitochondrial dynamics and mitophagy using SH-SY5Y cells. We found that CCCP decreased mitochondrial membrane potential, resulting in mitochondrial dysfunction. CCCP increased PGAM5, dynamin-related protein 1 (DRP1), and optic atrophy 1 (OPA1) expression of the mitochondrial fraction in a time-dependent manner. Knockdown of PGAM5 inhibited DRP1 translocation without a change in OPA1 expression in CCCP-treated cells. Furthermore, knockdown of PGAM5 and DRP1 significantly blocked the increase of PTEN-induced putative protein kinase 1 (PINK1) and Parkin expression in the mitochondrial fraction of CCCP-treated cells. Interestingly, CCCP did not alter PINK1/Parkin expression in the mitochondrial fraction of OPA1 knockdown cells. Inhibiting mitophagy by PGAM5 knockdown accelerated CCCP-induced apoptosis. CCCP treatment also results in PINK1 stabilization on the mitochondrial membrane, which subsequently increases Parkin recruitment from the cytosol to abnormal mitochondria. In addition, we found that CCCP increased the level of mitochondrial LC3II, indicating that Parkin recruitment of PINK1 is a result of mitophagy. We propose that activation of PGAM5 is associated with DRP1 recruitment and PINK1 stabilization, which contribute to the modulation of mitophagy in CCCP-treated cells with mitochondrial dysfunction. In conclusion, we demonstrated that PGAM5 regulates PINK1-Parkin-mediated mitophagy, which can exert a neuroprotective effect against CCCP-induced apoptosis. Copyright © 2017 Elsevier B.V. All rights

Sedimentology and arsenic pollution in the Bengal Basin: insight into arsenic occurrence and subsurface geology.

NASA Astrophysics Data System (ADS)

Hills, Andrew; McArthur, John

2014-05-01

The Bengal delta system is a geologically recent feature overlying a deeply incised palaeo-surface formed during the Last Glacial Maximum. This surface is a series of terraces and valleys created by river incision (Goodbred & Kuehl 2003). The terraces were weathered, forming a thin, indurated laterite deposit (Goodbred & Kuehl 2000) at depths greater than 50 m. McArthur et al. (2008) define this as a palaeosol and have identified it at depths greater than 30 m though out Bangladesh and West Bengal. It has been observed that arsenic concentrations at these sites are lower than the rest of the delta. It has been assumed that the surface morphology at sites where there is a palaeosol are similar and can therefore be characterised by remote sensing, in the form of Google Earth images. Sites were selected in Bangladesh and West Bengal, from work by McArthur et al. (2011); Hoque et al. (2012), where groundwater chemistry and sedimentology data are available making it possible to determine if the subsurface is a palaeo-channel or palaeo-interfluve. Arsenic concentration data have been inputted into Google Earth and the palaeo-channels marked where the arsenic concentration is greater than 10 µg/L, and palaeo-interfluves where arsenic concentration is less than 10 µg/L. The surface morphologies in these domains have been examined for similarities, and it was shown that avulsion scars and abandoned river channels are found where arsenic concentrations are greater than 10 µg/L. Conversely the surrounding areas that are devoid of channel scars have arsenic concentrations less than 10 µg/L. Using the correlation between avulsion features being representative of palaeo-channels and high arsenic concentrations, sites were selected that had a similar surface morphology to the type localities. A comparison of these images and arsenic concentrations showed that the postulate is valid for over 80 percent of cases. Where this is not valid, this could indicate that the subsurface

l-tyrosine induces melanocyte differentiation in novel pink-eyed dilution castaneus mouse mutant showing age-related pigmentation.

PubMed

Hirobe, Tomohisa; Ishikawa, Akira

2015-12-01

The mouse pink-eyed dilution (oculocutaneous albinism II; p/Oca2(p)) locus is known to control tyrosinase activity, melanin content, and melanosome development in melanocytes. Pink-eyed dilution castaneus (p(cas)/Oca2(p-cas)) is a novel mutant allele on mouse chromosome 7 that arose spontaneously in Indonesian wild mice, Mus musculus castaneus. Mice homozygous for Oca2(p-cas) usually exhibit pink eyes and beige-colored coat on nonagouti C57BL/6 (B6) background. Recently, a novel spontaneous mutation occurred in the progeny between this mutant and B6 mice. The eyes of this novel mutant progressively become black from pink and the coat becomes dark gray from beige with aging. The aim of this study is to clarify whatever differences exist in melanocyte proliferation and differentiation between the ordinary (pink-eyed) and novel (black-eyed) mutant using serum-free primary culture system. The characteristics of melanocyte proliferation and differentiation were investigated by serum-free primary culture system using melanocyte-proliferation medium (MDMD). The proliferation of melanoblasts in MDMD did not differ between the two mice. However, when the epidermal cell suspensions were cultured with MDMD supplemented with l-tyrosine (Tyr), the differentiation of black-eyed melanocytes was greatly induced in a concentration-dependent manner compared with pink-eyed melanocytes. Immunocytochemistry demonstrated that the expression of tyrosinase and tyrosinase-related protein-1 (Tyrp1) was greatly induced or stimulated both in pink-eyed and black-eyed melanocytes, whereas the expression of microphthalmia-associated transcription factor (Mitf) was stimulated only in black-eyed melanocytes. These results suggest that the age-related coat darkening in black-eyed mutant may be caused by the increased ability of melanocyte differentiation dependent on l-Tyr through the upregulation of tyrosinase, Tyrp1, and Mitf. This mutant mouse may be useful for animal model to clarify the

Instantaneous radioiodination of rose bengal at room temperature and a cold kit therefor

DOEpatents

O'Brien, Jr., Harold A.; Hupf, Homer B.; Wanek, Philip M.

1981-01-01

The disclosure relates to the radioiodination of rose bengal at room temperature and a cold-kit therefor. A purified rose bengal tablet is stirred into acidified ethanol at or near room temperature, until a suspension forms. Reductant-free .sup.125 I.sup.- is added and the resulting mixture stands until the exchange label reaction occurs at room temperature. A solution of sterile isotonic phosphate buffer and sodium hydroxide is added and the final resulting mixture is sterilized by filtration.

Physiological consequences of the salmon louse (Lepeophtheirus salmonis) on juvenile pink salmon (Oncorhynchus gorbuscha): implications for wild salmon ecology and management, and for salmon aquaculture.

PubMed

Brauner, C J; Sackville, M; Gallagher, Z; Tang, S; Nendick, L; Farrell, A P

2012-06-19

Pink salmon, Oncorhynchus gorbuscha, are the most abundant wild salmon species and are thought of as an indicator of ecosystem health. The salmon louse, Lepeophtheirus salmonis, is endemic to pink salmon habitat but these ectoparasites have been implicated in reducing local pink salmon populations in the Broughton Archipelago, British Columbia. This allegation arose largely because juvenile pink salmon migrate past commercial open net salmon farms, which are known to incubate the salmon louse. Juvenile pink salmon are thought to be especially sensitive to this ectoparasite because they enter the sea at such a small size (approx. 0.2 g). Here, we describe how 'no effect' thresholds for salmon louse sublethal impacts on juvenile pink salmon were determined using physiological principles. These data were accepted by environmental managers and are being used to minimize the impact of salmon aquaculture on wild pink salmon populations.

Species profiles: Life histories and environmental requirements of coastal fishes and invertebrates (Pacific Northwest): Pink salmon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bonar, S.A.; Pauley, G.B.; Thomas, G.L.

1989-01-01

Species profiles are literature summaries of the taxonomy, morphology, range, life history, and environmental requirements of coastal aquatic species. They are designed to assist in environmental impact assessment. The pink salmon, often called humpback salmon or humpy, is easily identified by its extremely small scales (150 to 205) on the lateral line. They are the most abundant of the Pacific salmon species and spawn in North American and Asian streams bordering the Pacific and Arctic Oceans. They have a very simple two-year life cycle, which is so invariable that fish running in odd-numbered years are isolated from fish running inmore » even-numbered years so that no gene flow occurs between them. Adults spawn in the fall and the young fry emerge in the spring. The pink salmon is less desirable in commercial and sport catches than most other salmon because of its small size and its soft pale flesh. The Puget Sound region of Washington State is the southern geographic limit of streams supporting major pink salmon runs in the eastern North Pacific. Pink salmon runs are presently only in odd-numbered years in this region. Optimum water temperatures for spawning range from 7.2 to 12.8/degree/C. Productive pink salmon streams have less than 5.0% by volume of fine sediments (less than or equal to0.8 mm). 87 refs., 5 figs., 1 tab.« less

Geomagnetic imprinting predicts spatio-temporal variation in homing migration of pink and sockeye salmon.

PubMed

Putman, Nathan F; Jenkins, Erica S; Michielsens, Catherine G J; Noakes, David L G

2014-10-06

Animals navigate using a variety of sensory cues, but how each is weighted during different phases of movement (e.g. dispersal, foraging, homing) is controversial. Here, we examine the geomagnetic and olfactory imprinting hypotheses of natal homing with datasets that recorded variation in the migratory routes of sockeye (Oncorhynchus nerka) and pink (Oncorhynchus gorbuscha) salmon returning from the Pacific Ocean to the Fraser River, British Columbia. Drift of the magnetic field (i.e. geomagnetic imprinting) uniquely accounted for 23.2% and 44.0% of the variation in migration routes for sockeye and pink salmon, respectively. Ocean circulation (i.e. olfactory imprinting) predicted 6.1% and 0.1% of the variation in sockeye and pink migration routes, respectively. Sea surface temperature (a variable influencing salmon distribution but not navigation, directly) accounted for 13.0% of the variation in sockeye migration but was unrelated to pink migration. These findings suggest that geomagnetic navigation plays an important role in long-distance homing in salmon and that consideration of navigation mechanisms can aid in the management of migratory fishes by better predicting movement patterns. Finally, given the diversity of animals that use the Earth's magnetic field for navigation, geomagnetic drift may provide a unifying explanation for spatio-temporal variation in the movement patterns of many species. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

The classical pink-eyed dilution mutation affects angiogenic responsiveness.

PubMed

Rogers, Michael S; Boyartchuk, Victor; Rohan, Richard M; Birsner, Amy E; Dietrich, William F; D'Amato, Robert J

2012-01-01

Angiogenesis is the process by which new blood vessels are formed from existing vessels. Mammalian populations, including humans and mice, harbor genetic variations that alter angiogenesis. Angiogenesis-regulating gene variants can result in increased susceptibility to multiple angiogenesis-dependent diseases in humans. Our efforts to dissect the complexity of the genetic diversity that regulates angiogenesis have used laboratory animals due to the availability of genome sequence for many species and the ability to perform high volume controlled breeding. Using the murine corneal micropocket assay, we have observed more than ten-fold difference in angiogenic responsiveness among various mouse strains. This degree of difference is observed with either bFGF or VEGF induced corneal neovascularization. Ongoing mapping studies have identified multiple loci that affect angiogenic responsiveness in several mouse models. In this study, we used F2 intercrosses between C57BL/6J and the 129 substrains 129P1/ReJ and 129P3/J, as well as the SJL/J strain, where we have identified new QTLs that affect angiogenic responsiveness. In the case of AngFq5, on chromosome 7, congenic animals were used to confirm the existence of this locus and subcongenic animals, combined with a haplotype-based mapping approach that identified the pink-eyed dilution mutation as a candidate polymorphism to explain AngFq5. The ability of mutations in the pink-eyed dilution gene to affect angiogenic response was demonstrated using the p-J allele at the same locus. Using this allele, we demonstrate that pink-eyed dilution mutations in Oca2 can affect both bFGF and VEGF-induced corneal angiogenesis.

Illustrated accounts of coccinellid predators of Maconellicoccus hirsutus (Green) (Hemiptera: Sternorrhyncha: Pseudococcidae) on mulberry in India, with description of a new species of Scymnus Kugelann (Coleoptera: Coccinellidae) from West Bengal.

PubMed

Poorani, J; Lalitha, N

2018-02-20

The pink hibiscus mealybug, Maconellicoccus hirsutus (Green), is a major pest of mulberry (Morus alba L.), the sole host of the mulberry silkworm, Bombyx mori (L.), which is a source of livelihood to millions of sericulture farmers in India. Several predators, mainly Coccinellidae (Coleoptera), have been reported to feed on M. hirsutus on mulberry. Coccinellid predators of M. hirsutus collected on mulberry from different parts of India are illustrated here with brief diagnostic notes to facilitate their identification. An account of mycophagous species of coccinellids commonly found on mulberry and misreported as predators of mulberry pests is also given with illustrations. Scymnus (Pullus) latifolius sp. nov., a promising predator of M. hirsutus, hitherto misidentified and reported as Scymnus pallidicollis Mulsant, is described and illustrated from West Bengal, India, with detailed biological notes. Keiscymnus taiwanensis Yang Wu, 1972 is reduced to a new junior synonym of Scymnus pallidicollis Mulsant, 1853 (syn. nov.). Illeis bielawskii Ghorpade, 1976 is found to be a valid species and removed from synonymy with I. bistigmosa Mulsant, 1850 (stat. rev.).

Effect of "Pink Eye" Label on Parents' Intent to Use Antibiotics and Perceived Contagiousness.

PubMed

Scherer, Laura D; Finan, Caitlin; Simancek, Dalton; Finkelstein, Jerome I; Tarini, Beth A

2016-06-01

Parents of children who presented for a pediatrics appointment responded to a clinical vignette that described a child with symptoms consistent with acute viral conjunctivitis. In a 2 × 2 randomized survey design, the physician in the vignette either used the term "pink eye" or "eye infection" to describe the symptoms, and either told parents that antibiotics are likely ineffective at treating the symptoms or did not discuss effectiveness. When the symptoms were referred to as "pink eye," parents remained interested in antibiotics, despite being informed about their ineffectiveness. By contrast, when the symptoms were referred to as an "eye infection," information about antibiotic ineffectiveness significantly reduced interest, Mdiff = 1.63, P < .001. Parents who received the "pink eye" label also thought that the symptoms were more contagious and were less likely to believe that their child could go to child care, compared with parents who received the "eye infection" label, Mdiff = 0.37, P = .38. © The Author(s) 2015.

An Intrathermocline Eddy and a tropical cyclone in the Bay of Bengal

PubMed Central

Gordon, Arnold L.; Shroyer, Emily; Murty, V. S. N.

2017-01-01

The Bay of Bengal, subjected to monsoonal forcing and tropical cyclones, displays a complex field of ocean eddies. On 5 December 2013 a sub-surface vortex or Intrathermocline Eddy (ITE) composed of water characteristic of the Andaman Sea was observed within the thermocline of the western Bay of Bengal. We propose that the ITE was the product of Tropical Cyclone Lehar interaction on 27 November 2013 with a westward propagating surface eddy from the eastern Bay of Bengal. While Lehar’s interaction with the ocean initially removes heat from the upper layers of the eddy, air-sea flux is limited as the deeper portions of the eddy was subducted into the stratified thermocline, inhibiting further interaction with the atmosphere. The ITE core from 30 to 150 m is thus isolated from local air-sea fluxes by strong stratification at the mixed layer base, and its periphery is stable to shear instability, suggestive of longevity and the ability to carry water far distances with minimal modification. PMID:28401909

Sea lice infestations on juvenile chum and pink salmon in the Broughton Archipelago, Canada, from 2003 to 2012.

PubMed

Patanasatienkul, Thitiwan; Sanchez, Javier; Rees, Erin E; Krkosek, Martin; Jones, Simon R M; Revie, Crawford W

2013-07-22

Juvenile pink salmon Oncorhynchus gorbuscha and chum salmon O. keta were sampled by beach or purse seine to assess levels of sea lice infestation in the Knight Inlet and Broughton Archipelago regions of coastal British Columbia, Canada, during the months of March to July from 2003 to 2012. Beach seine data were analyzed for sea lice infestation that was described in terms of prevalence, abundance, intensity, and intensity per unit length. The median annual prevalence for chum was 30%, ranging from 14% (in 2008 and 2009) to 73% (in 2004), while for pink salmon, the median was 27% and ranged from 10% (in 2011) to 68% (in 2004). Annual abundance varied from 0.2 to 5 sea lice per fish with a median of 0.47 for chum and from 0.1 to 3 lice (median 0.42) for pink salmon. Annual infestation followed broadly similar trends for both chum and pink salmon. However, the abundance and intensity of Lepeophtheirus salmonis and Caligus clemensi, the 2 main sea lice species of interest, were significantly greater on chum than on pink salmon in around half of the years studied. Logistic regression with random effect was used to model prevalence of sea lice infestation for the combined beach and purse seine data. The model suggested inter-annual variation as well as a spatial clustering effect on the prevalence of sea lice infestation in both chum and pink salmon. Fish length had an effect on prevalence, although the nature of this effect differed according to host species.

Multi-Toxin Resistance Enables Pink Bollworm Survival on Pyramided Bt Cotton

PubMed Central

Fabrick, Jeffrey A.; Unnithan, Gopalan C.; Yelich, Alex J.; DeGain, Ben; Masson, Luke; Zhang, Jie; Carrière, Yves; Tabashnik, Bruce E.

2015-01-01

Transgenic crops producing Bacillus thuringiensis (Bt) proteins kill key insect pests, providing economic and environmental benefits. However, the evolution of pest resistance threatens the continued success of such Bt crops. To delay or counter resistance, transgenic plant “pyramids” producing two or more Bt proteins that kill the same pest have been adopted extensively. Field populations of the pink bollworm (Pectinophora gossypiella) in the United States have remained susceptible to Bt toxins Cry1Ac and Cry2Ab, but field-evolved practical resistance to Bt cotton producing Cry1Ac has occurred widely in India. Here we used two rounds of laboratory selection to achieve 18,000- to 150,000-fold resistance to Cry2Ab in pink bollworm. Inheritance of resistance to Cry2Ab was recessive, autosomal, conferred primarily by one locus, and independent of Cry1Ac resistance. We created a strain with high resistance to both toxins by crossing the Cry2Ab-resistant strain with a Cry1Ac-resistant strain, followed by one selection with Cry2Ab. This multi-toxin resistant strain survived on field-collected Bt cotton bolls producing both toxins. The results here demonstrate the risk of evolution of resistance to pyramided Bt plants, particularly when toxins are deployed sequentially and refuges are scarce, as seen with Bt cotton and pink bollworm in India. PMID:26559899

Voices of the poor from the margins of Bengal: structural inequities and health.

PubMed

Dutta, Mohan J; Dutta, Uttaran

2013-01-01

In opposition to the traditional approaches to health communication that treat the subaltern sectors as passive recipients of messages of enlightenment configured in top-down interventions, the culture-centered approach foregrounds the importance of listening to subaltern communities at the margins through dialogue. We build on earlier culture-centered projects in rural communities of West Bengal, India, to develop participatory research strategies for understanding the local processes through which the structural marginalization of the poor plays out in rural Bengal. Study results point toward the marginalization of the poor both communicatively and economically, attending to the ways in which communicative marginalization lies at the heart of economic oppressions. Through locally articulated concepts of "health as shortage" and "communication as shortage," community members put forth alternative rationalities of health that highlight structural resources at the heart of health. These local articulations of shortage offer an alternative rationality for organizing health promotion efforts in the rural margins of Bengal through the foregrounding of discourses of shortage.

Chronic arsenic toxicity in Bangladesh and West Bengal, India--a review and commentary.

PubMed

Rahman, M M; Chowdhury, U K; Mukherjee, S C; Mondal, B K; Paul, K; Lodh, D; Biswas, B K; Chanda, C R; Basu, G K; Saha, K C; Roy, S; Das, R; Palit, S K; Quamruzzaman, Q; Chakraborti, D

2001-01-01

Fifty districts of Bangladesh and 9 districts in West Bengal, India have arsenic levels in groundwater above the World Health Organization's maximum permissible limit of 50 microg/L. The area and population of 50 districts of Bangladesh and 9 districts in West Bengal are 118,849 km2 and 104.9 million and 38,865 km2 and 42.7 million, respectively. Our current data show arsenic levels above 50 microg/ L in 2000 villages, 178 police stations of 50 affected districts in Bangladesh and 2600 villages, 74 police stations/blocks of 9 affected districts in West Bengal. We have so far analyzed 34,000 and 101,934 hand tube-well water samples from Bangladesh and West Bengal respectively by FI-HG-AAS of which 56% and 52%, respectively, contained arsenic above 10 microg/L and 37% and 25% arsenic above 50 microg/L. In our preliminary study 18,000 persons in Bangladesh and 86,000 persons in West Bengal were clinically examined in arsenic-affected districts. Of them, 3695 (20.6% including 6.11% children) in Bangladesh and 8500 (9.8% including 1.7% children) in West Bengal had arsenical dermatological features. Symptoms of chronic arsenic toxicity developed insidiously after 6 months to 2 years or more of exposure. The time of onset depends on the concentration of arsenic in the drinking water, volume of intake, and the health and nutritional status of individuals. Major dermatological signs are diffuse or spotted melanosis, leucomelanosis, and keratosis. Chronic arsenicosis is a multisystem disorder. Apart from generalized weakness, appetite and weight loss, and anemia, our patients had symptoms relating to involvement of the lungs, gastrointestinal system, liver, spleen, genitourinary system, hemopoietic system, eyes, nervous system, and cardiovascular system. We found evidence of arsenic neuropathy in 37.3% (154 of 413 cases) in one group and 86.8% (33 of 38 cases) in another. Most of these cases had mild and predominantly sensory neuropathy. Central nervous system involvement

Pseudomonas mesophilica and an unnamed taxon, clinical isolates of pink-pigmented oxidative bacteria.

PubMed

Gilardi, G L; Faur, Y C

1984-10-01

Twenty-one strains of pink-pigmented bacteria, isolated from human clinical specimens and an environmental source, were compared with Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. These isolates were gram-negative, oxidative rods which were motile by means of a single polar flagellum; gave positive catalase, indophenol oxidase, urease, and amylase reactions; and grew slowly at 30 degrees C. Fourteen isolates conformed to the designated type strains Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. The remaining seven strains represented an undescribed taxon. These pink bacteria appear to be invaders of debilitated patients with an underlying chronic disease.

Pseudomonas mesophilica and an unnamed taxon, clinical isolates of pink-pigmented oxidative bacteria.

PubMed Central

Gilardi, G L; Faur, Y C

1984-01-01

Twenty-one strains of pink-pigmented bacteria, isolated from human clinical specimens and an environmental source, were compared with Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. These isolates were gram-negative, oxidative rods which were motile by means of a single polar flagellum; gave positive catalase, indophenol oxidase, urease, and amylase reactions; and grew slowly at 30 degrees C. Fourteen isolates conformed to the designated type strains Pseudomonas mesophilica ATCC 29983 and Protaminobacter ruber ATCC 8457. The remaining seven strains represented an undescribed taxon. These pink bacteria appear to be invaders of debilitated patients with an underlying chronic disease. PMID:6490848

Overexpression of Buffy enhances the loss of parkin and suppresses the loss of Pink1 phenotypes in Drosophila.

PubMed

M'Angale, P Githure; Staveley, Brian E

2017-03-01

Mutations in parkin (PARK2) and Pink1 (PARK6) are responsible for autosomal recessive forms of early onset Parkinson's disease (PD). Attributed to the failure of neurons to clear dysfunctional mitochondria, loss of gene expression leads to loss of nigrostriatal neurons. The Pink1/parkin pathway plays a role in the quality control mechanism aimed at eliminating defective mitochondria, and the failure of this mechanism results in a reduced lifespan and impaired locomotor ability, among other phenotypes. Inhibition of parkin or Pink1 through the induction of stable RNAi transgene in the Ddc-Gal4-expressing neurons results in such phenotypes to model PD. To further evaluate the effects of the overexpression of the Bcl-2 homologue Buffy, we analysed lifespan and climbing ability in both parkin-RNAi- and Pink1-RNAi-expressing flies. In addition, the effect of Buffy overexpression upon parkin-induced developmental eye defects was examined through GMR-Gal4-dependent expression. Curiously, Buffy overexpression produced very different effects: the parkin-induced phenotypes were enhanced, whereas the Pink1-enhanced phenotypes were suppressed. Interestingly, the overexpression of Buffy along with the inhibition of parkin in the neuron-rich eye results in the suppression of the developmental eye defects.

PINK1, Parkin, and Mitochondrial Quality Control: What can we Learn about Parkinson’s Disease Pathobiology?

PubMed Central

Truban, Dominika; Hou, Xu; Caulfield, Thomas R.; Fiesel, Fabienne C.; Springer, Wolfdieter

2016-01-01

The first clinical description of Parkinson’s disease (PD) will embrace its two century anniversary in 2017. For the past 30 years, mitochondrial dysfunction has been hypothesized to play a central role in the pathobiology of this devastating neurodegenerative disease. The identifications of mutations in genes encoding PINK1 (PTEN-induced kinase 1) and Parkin (E3 ubiquitin ligase) in familial PD and their functional association with mitochondrial quality control provided further support to this hypothesis. Recent research focused mainly on their key involvement in the clearance of damaged mitochondria, a process known as mitophagy. It has become evident that there are many other aspects of this complex regulated, multifaceted pathway that provides neuroprotection. As such, numerous additional factors that impact PINK1/Parkin have already been identified including genes involved in other forms of PD. A great pathogenic overlap amongst different forms of familial, environmental and even sporadic disease is emerging that potentially converges at the level of mitochondrial quality control. Tremendous efforts now seek to further detail the roles and exploit PINK1 and Parkin, their upstream regulators and downstream signaling pathways for future translation. This review summarizes the latest findings on PINK1/Parkin-directed mitochondrial quality control, its integration and cross-talk with other disease factors and pathways as well as the implications for idiopathic PD. In addition, we highlight novel avenues for the development of biomarkers and disease-modifying therapies that are based on a detailed understanding of the PINK1/Parkin pathway. PMID:27911343

KORO SOCIAL RESPONSE (URBAN) : A LONGITUDINAL STUDY OF NORTH BENGAL KORO EPIDEMIC

PubMed Central

Chowdhury, Arabinda N.

1992-01-01

Social responses to Koro illness was studied from an urban population (n = 118) of Darjeeling district of West Bengal State, during and after the North Bengal Koro epidemic. The prevalent social cognition of Koro as a positive illness paradigm, both among the Koro-affected and non-affected families, was the important social dynamics that helped the epidemic to spread as the illness in the region. The cognition-intensity related to the Koro vulnerability has diminished gradually with the passing of time, which was well corroborated with the gradually weaning incidence curve of Koro illness in the region. PMID:21776098

Species Profiles: Life Histories and Environmental Requirements of Coastal Fishes and Invertebrates (Pacific Northwest) Pink Salmon

DTIC Science & Technology

1989-01-01

methodology weight in the sockeye salmon for determining instream flow re- ( Oncorhynchus nerka ) and the pink quirements for fish. Pages 72-86 in salmon (0...Scientific name ........... Oncorhynchus jor pink salmon runs. Migration gorbuscha (Walbaum) (Figure a patterns of fish entering British Preferred...A dominant male guards the considered the most specialized of the female during the digging process, salmon in the genus Oncorhynchus be- attacking

Predecessor rain events over China's low-latitude highlands associated with Bay of Bengal tropical cyclones

NASA Astrophysics Data System (ADS)

Yuan, Junpeng; Zhao, Di; Yang, Ruowen; Yang, Hongfei

2018-02-01

A predecessor rain event (PRE) is defined as organized heavy rainfall that occurs far ahead of tropical cyclone (TC), yet directly associated with the deep tropical moisture originating from the TC vicinity. The PREs occurring over China's low-latitude highlands (CLLH) in association with Bay of Bengal TCs were investigated from 1981 to 2012. Results indicate that about 19% of Bay of Bengal TCs produces PRE. The PREs frequently occur when TCs are active in the northern Bay of Bengal with northeastward paths. The PREs are more likely to appear in the pre-monsoon and post-monsoon seasons, with peaks in May and October, respectively. The median lifetime of the PREs was approximately two days. The distances between PREs and parent TCs are ranged from 745 to 1849 km, with a median distance of 1118 km. Composite results of PREs suggested that deep moisture is advected from the TC vicinity to the remote CLLH region, which is situated beneath the equatorward entrance of the upper-level East Asia subtropical jet (EASJ). The lower-level southwesterly flow, which is associated with a strong pressure gradient between the western Pacific subtropical high and a trough in Bay of Bengal, steers TCs conveying abundant moisture from the Bay of Bengal to the CLLH region. The enhancement of the ascent and frontogenesis within the equatorward entrance region of the EASJ is favorable for occurrence of PREs in CLLH. TCs may also have a dynamical role in occurrence of PREs by intensifying the upper-level EASJ.

Assessing the suitability of benthic foraminiferal morpho-groups to reconstruct paleomonsoon from Bay of Bengal

NASA Astrophysics Data System (ADS)

Manasa, M.; Saraswat, Rajeev; Nigam, Rajiv

2016-04-01

Temporal changes in benthic foraminiferal morpho-groups were suggested as an effective proxy to reconstruct past monsoon intensity from the Arabian Sea. Here, in order to test the applicability of temporal variation in morpho-groups to reconstruct past monsoon intensity from the Bay of Bengal, we have documented recent benthic foraminiferal distribution from the continental shelf region of the northwestern Bay of Bengal. Based on the external morphology, benthic foraminifera were categorized into rounded symmetrical (RSBF) and angular asymmetrical benthic foraminifera (AABF). Additionally, a few other dominant groups were also identified based on test composition (agglutinated, calcareous) and abundance (Asterorotalids and Nonions). The relative abundance of each group was compared with the ambient physico-chemical conditions, including dissolved oxygen, organic matter, salinity and temperature. We report that the RSBF are abundant in comparatively warm and well oxygenated waters of low salinity, suggesting a preference for high energy environment, whereas AABF dominate relatively cold, hypersaline deeper waters with low dissolved oxygen, indicating a low energy environment. The agglutinated foraminifera, Asterorotalids and Nonions dominate shallow water, low salinity regions, whereas the calcareous benthic foraminiferal abundance increases away from the riverine influx regions. Food availability, as estimated from organic carbon abundance in sediments, has comparatively less influence on faunal distribution in the northwestern Bay of Bengal, as compared to dissolved oxygen, temperature and salinity. We conclude that the factors associated with freshwater influx affect the distribution of benthic foraminiferal morpho-groups in the northwestern Bay of Bengal and thus it can be used to reconstruct past monsoon intensity from the Bay of Bengal.

Evidence for competitive dominance of Pink salmon (Oncorhynchus gorbuscha) over other Salmonids in the North Pacific Ocean

USGS Publications Warehouse

Ruggerone, G.T.; Nielsen, J.L.

2004-01-01

Relatively little is known about fish species interactions in offshore areas of the world's oceans because adequate experimental controls are typically unavailable in such vast areas. However, pink salmon (Oncorhynchus gorbuscha) are numerous and have an alternating-year pattern of abundance that provides a natural experimental control to test for interspecific competition in the North Pacific Ocean and Bering Sea. Since a number of studies have recently examined pink salmon interactions with other salmon, we reviewed them in an effort to describe patterns of interaction over broad regions of the ocean. Research consistently indicated that pink salmon significantly altered prey abundance of other salmon species (e.g., zooplankton, squid), leading to altered diet, reduced total prey consumption and growth, delayed maturation, and reduced survival, depending on species and locale. Reduced survival was observed in chum salmon (O. keta) and Chinook salmon (O. tshawytscha) originating from Puget Sound and in Bristol Bay sockeye salmon (O. nerka). Growth of pink salmon was not measurably affected by other salmon species, but their growth was sometimes inversely related to their own abundance. In all marine studies, pink salmon affected other species through exploitation of prey resources rather than interference. Interspecific competition was observed in nearshore and offshore waters of the North Pacific Ocean and Bering Sea, and one study documented competition between species originating from different continents. Climate change had variable effects on competition. In the North Pacific Ocean, competition was observed before and after the ocean regime shift in 1977 that significantly altered abundances of many marine species, whereas a study in the Pacific Northwest reported a shift from predation- to competition-based mortality in response to the 1982/1983 El Nino. Key traits of pink salmon that influenced competition with other salmonids included great abundance, high

Competition between Asian pink salmon (Oncorhynchus gorbuscha) and Alaskan sockeye salmon (O. nerka) in the North Pacific Ocean

USGS Publications Warehouse

Ruggerone, G.T.; Zimmermann, M.; Myers, K.W.; Nielsen, J.L.; Rogers, D.E.

2003-01-01

The importance of interspecific competition as a mechanism regulating population abundance in offshore marine communities is largely unknown. We evaluated offshore competition between Asian pink salmon and Bristol Bay (Alaska) sockeye salmon, which intermingle in the North Pacific Ocean and Bering Sea, using the unique biennial abundance cycle of Asian pink salmon from 1955 to 2000. Sockeye salmon growth during the second and third growing seasons at sea, as determined by scale measurements, declined significantly in odd-numbered years, corresponding to years when Asian pink salmon are most abundant. Bristol Bay sockeye salmon do not interact with Asian pink salmon during their first summer and fall seasons and no difference in first year scale growth was detected. The interaction with odd-year pink salmon led to significantly smaller size at age of adult sockeye salmon, especially among younger female salmon. Examination of sockeye salmon smolt to adult survival rates during 1977-97 indicated that smolts entering the ocean during even-numbered years and interacting with abundant odd-year pink salmon during the following year experienced 26% (age-2 smolt) to 45% (age-1 smolt) lower survival compared with smolts migrating during odd-numbered years. Adult sockeye salmon returning to Bristol Bay from even-year smolt migrations were 22% less abundant (reduced by 5.9 million fish per year) compared with returns from odd-year migrations. The greatest reduction in adult returns occurred among adults spending 2 compared with 3 years at sea. Our new evidence for interspecific competition highlights the need for multispecies, international management of salmon production, including salmon released from hatcheries into the ocean.

Responses of pink salmon to CO2-induced aquatic acidification

NASA Astrophysics Data System (ADS)

Ou, Michelle; Hamilton, Trevor J.; Eom, Junho; Lyall, Emily M.; Gallup, Joshua; Jiang, Amy; Lee, Jason; Close, David A.; Yun, Sang-Seon; Brauner, Colin J.

2015-10-01

Ocean acidification negatively affects many marine species and is predicted to cause widespread changes to marine ecosystems. Similarly, freshwater ecosystems may potentially be affected by climate-change-related acidification; however, this has received far less attention. Freshwater fish represent 40% of all fishes, and salmon, which rear and spawn in freshwater, are of immense ecosystem, economical and cultural importance. In this study, we investigate the impacts of CO2-induced acidification during the development of pink salmon, in freshwater and following early seawater entry. At this critical and sensitive life stage, we show dose-dependent reductions in growth, yolk-to-tissue conversion and maximal O2 uptake capacity; as well as significant alterations in olfactory responses, anti-predator behaviour and anxiety under projected future increases in CO2 levels. These data indicate that future populations of pink salmon may be at risk without mitigation and highlight the need for further studies on the impact of CO2-induced acidification on freshwater systems.

Pink-beam focusing with a one-dimensional compound refractive lens

DOE PAGES

Dufresne, Eric M.; Dunford, Robert W.; Kanter, Elliot P.; ...

2016-07-28

The performance of a cooled Be compound refractive lens (CRL) has been tested at the Advanced Photon Source (APS) to enable vertical focusing of the pink beam and permit the X-ray beam to spatially overlap with an 80 µm-high low-density plasma that simulates astrophysical environments. Focusing the fundamental harmonics of an insertion device white beam increases the APS power density; here, a power density as high as 500 W mm –2 was calculated. A CRL is chromatic so it does not efficiently focus X-rays whose energies are above the fundamental. Only the fundamental of the undulator focuses at the experiment.more » A two-chopper system reduces the power density on the imaging system and lens by four orders of magnitude, enabling imaging of the focal plane without any X-ray filter. As a result, a method to measure such high power density as well as the performance of the lens in focusing the pink beam is reported.« less

Distribution of pink-pigmented facultative methylotrophs on leaves of vegetables.

PubMed

Mizuno, Masayuki; Yurimoto, Hiroya; Yoshida, Naoko; Iguchi, Hiroyuki; Sakai, Yasuyoshi

2012-01-01

The distribution of pink-pigmented facultative methylotrophs (PPFMs) on the leaves of various vegetables was studied. All kinds of vegetable leaves tested gave pink-pigmented colonies on agar plates containing methanol as sole carbon source. The numbers of PPFMs on the leaves, colony-forming units (CFU)/g of fresh leaves, differed among the plants, although they were planted and grown at the same farm. Commercial green perilla, Perilla frutescens viridis (Makino) Makino, gave the highest counts of PPFMs (2.0-4.1×10(7) CFU/g) of all the commercial vegetable leaves tested, amounting to 15% of total microbes on the leaves. The PPFMs isolated from seeds of two varieties of perilla, the red and green varieties, exhibited high sequence similarity as to the 16S rRNA gene to two different Methylobacterium species, M. fujisawaense DSM5686(T) and M. radiotolerans JCM2831(T) respectively, suggesting that there is specific interaction between perilla and the PPFMs.

Variability of resistance in Black Bengal goats naturally infected with Haemonchus contortus.

PubMed

Kumar, Ratnesh; Ranjan, Sanjeev; Vishnu, P Guru; Negi, Mamta; Senapati, P K; Charita, V Gnani

2015-03-01

A total 290 Black Bengal goats (6 buck, 109 doe and 175 kids born from 11 sires) were studied to evaluate the variability of resistance in Black Bengal goats naturally infected with Haemonchus contortus. The variability of resistance in Black Bengal goat was studied for both genetic and non-genetic factors like village, sex, age dam, sire, dam resistance group and offspring resistance group. Male kids have slightly higher resistance than female kids although it was not significant. Resistance of kids was increased as age increases and kid population showed significantly different resistance status among the offspring resistant groups. The doe population showed significantly different LEPG as per the resistance group in all the collections. The present study found that the resistance of kids under sire were varied significantly and observed that the kids under sire 1, 6-8 were significantly more resistant than the kids of the sire 2, 5 and 11 in 3rd collection and it is also noticed that maternal genetic effect has a very little impact on resistance of kids. Males (buck) were most resistant and the kids were least resistant and the resistance of dam was in between the male and kids population.

Molecular mechanisms underlying PINK1 and Parkin catalyzed ubiquitylation of substrates on damaged mitochondria.

PubMed

Koyano, Fumika; Matsuda, Noriyuki

2015-10-01

PINK1 and Parkin are gene products that cause genetic recessive Parkinsonism. PINK1 is a protein kinase and Parkin is a ubiquitin ligase (E3) that links ubiquitin to a substrate. Importantly, under steady state conditions, the enzymatic activity of Parkin is completely suppressed, but is activated when mitochondria become abnormal. In 2013 and 2014, biochemical and structure-function analyses revealed a number of critical mechanistic insights. First, Parkin is a self-inhibitory E3 that suppresses its E3 activity via intramolecular interactions. Second, in response to a decrease in mitochondrial membrane potential, PINK1 phosphorylates Ser65 in both the Parkin ubiquitin-like domain and ubiquitin itself. These phosphorylation events cooperate to relieve the Parkin autoinhibition. Third, activated Parkin forms a ubiquitin-thioester bond at Cys431 to produce a reaction intermediate that catalyzes ubiquitylation of substrates on damaged mitochondria. While the molecular mechanism regulating Parkin enzymatic activity has largely eluded clarification, a complete picture is now emerging. Copyright © 2015 Elsevier B.V. All rights reserved.

Seasonal modulation of M2 tide in the Northern Bay of Bengal

NASA Astrophysics Data System (ADS)

Tazkia, A. R.; Krien, Y.; Durand, F.; Testut, L.; Islam, AKM S.; Papa, F.; Bertin, X.

2017-04-01

The Northern Bay of Bengal (BoB) with its adjoining Ganges-Brahmaputra-Meghna delta (GBM) forms the largest deltaic region in the world. It is surrounded by a wide area of low-lying land (less than a few meters above mean sea level), very densely populated. It is home to a strong variability of sea level, across all timescales, with ample tides and frequent storm surges. It is also subject to extended river flooding during the monsoon season, with frequent overflows of two of the world's largest rivers (Brahmaputra and Ganges). There is thus a need to understand and predict the various mechanisms responsible for coastal and estuarine water level variability in this area. In this study, we address one of the least understood facets of this variability: the low-frequency modulation of tides. We focus on the seasonal changes of amplitude of the semi-diurnal lunar tide, M2. It is found that M2 amplitude shows marked changes between winter and summer seasons (of order 10 cm), incommensurate with most of the world's coastal ocean. We observe contrasted patterns from the open areas of the coastal ocean to the inner part of the GBM estuary. In the coastal ocean and over most of the GBM delta, M2 amplitude is stronger during summer and decreases until winter. Conversely, in the far northern part of GBM estuary, M2 amplitude is stronger during winter and weaker during summer. We make use of a hydrodynamic barotropic tidal model to decipher the processes responsible for this evolution. It is found that throughout the coastal ocean and over most of the GBM delta, this evolution is driven by frictional effects, with a seasonal modulation of bottom dissipation of tidal energy. Our simple barotropic model, however, does not capture the observed range of seasonal modulation of tides in the GBM estuary and at its mouth. Our study advocates for a careful consideration of these processes for a proper representation of the tidal dynamics as well as of the flooding hazard in the Bengal

Adaptive harvest management for the Svalbard population of pink-footed geese: briefing summary

USGS Publications Warehouse

Johnson, Fred A.

2013-01-01

The African-Eurasian Waterbird Agreement (AEWA; http://www.unep-aewa.org/) calls for means to manage populations which cause conflicts with certain human economic activities. The Svalbard population of the pink-footed goose has been selected as the first test case for such an international species management plan to be developed. This document describes progress to date on the development of an adaptive harvest management (AHM) strategy for maintaining pink-footed goose abundance near their target level by providing for sustainable harvasts in Norway and Denmark. This briefing supplements material provided in the Progress Summary distributed to the International Working Group on February 1, 2013. We emphasize that peer review is an essential aspect of the process of developing and implementing an AHM program for pink-footed geese, and we will continue to solicit reviews by the International Working Group and their staff, as well as scientists not engaged in this effort. We wish to make the Working Group aware the the following two manuscripts have been submitted recently to refereed journals and are available upon request from the senior authors: Jensen, G.H., J. Madsen, F.A. Johnson, and M. Tamstorf. Snow conditions as an estimator of the breeding output in high-Arctic pink-footed geese Anser brachyrhynchus. Polar Biology: In review. Johnson, F.A., G.H. Jensen, J. Madsen, and B.K. Williams. Uncertainity, robustness, and the value of information in managing an expanding Arctic goose population. Ecological Modeling: In review. In addition to these manuscripts, the Progress Summary (February 1, 2013), and this Briefing Summary (April 23, 2013) an annual report will be produced in August 2013 and every summer thereafter. Additional manuscripts for journal publication are also anticipated.

Frataxin-Mediated PINK1-Parkin-Dependent Mitophagy in Hepatic Steatosis: The Protective Effects of Quercetin.

PubMed

Liu, Peiyi; Lin, Hongkun; Xu, Yanyan; Zhou, Feng; Wang, Jing; Liu, Jingjing; Zhu, Xinhong; Guo, Xiaoping; Tang, Yuhan; Yao, Ping

2018-06-23

Naturally occurring quercetin has been found to induce mitophagy and prevent non-alcoholic fatty liver disease (NAFLD). However, it still remains elusive whether frataxin upregulation by quercetin contributes to the beneficial effect through mitophagy or not. Adult male C57BL/J mice were fed a high fat diet (HFD, 60% of energy from fat) with quercetin (100 mg/kg.bw) or not for 10 weeks. Quercetin alleviated HFD-induced histopathological changes, disorders of lipid metabolism, mitochondrial damage. Moreover, quercetin blocked mitophagy suppression by HFD based on the increased LC3II, PINK1 and Beclin1 expressions, as well as decreased p62 levels. Quercetin also improved the Parkin translocation to mitochondria confirmed by immunofluorescence. Specifically, frataxin was lowered in the liver of HFD-fed mice or HepG2 cell incubated with oleate/palmitate but restored by quercetin. And quercetin's regulation of frataxin may depend on p53. Furthermore, lentivirus-mediated stable knockdown of frataxin in HepG2 inhibited PINK1- Parkin-associated mitophagy and resulted in lipid accumulation. Frataxin was further decreased by free fatty acids in knockdown cells concomitantly with depressed PINK1-Parkin-associated mitophagy, which was partially normalized by quercetin. Quercetin alleviated hepatic steatosis by enhancing frataxin-mediated PINK1/Parkin-dependent mitophagy, highlighting a promising preventive strategy and mechanism for NAFLD by quercetin. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Plant colonization by pink-pigmented facultative methylotrophic bacteria (PPFMs).

PubMed

Omer, Zahra S; Tombolini, Riccardo; Gerhardson, Berndt

2004-03-01

Bacteria belonging to the genus Methylobacterium are characterized by being able to rely on methanol as a sole carbon and energy source and by presenting a more or less intense pink reddish pigmentation. These bacteria, also referred to as pink-pigmented methylotrophic bacteria (PPFMs), are common inhabitants of the phyllosphere and are found in many other environmental samples. Since they grow slowly they are often overlooked and their impact on phyllosphere microbial communities and on the plants harboring them is not well studied nor has their ecology been elucidated. In a survey of PPFM colonization in three different agricultural sites, PPFM populations were identified on both red clover and winter wheat, but red clover was more consistently colonized. Isolations from collected leaves showed PPFM populations to decrease from spring towards summer, but they increased again towards the end of the cropping season. Isolates from red clover readily colonized winter wheat leaves and vice versa in greenhouse experiments, but population sizes were dependent on the application procedure. Tested isolates had also good potential to colonize the rhizosphere, especially after seed inoculations. Confocal scanning laser microscopy showed gfp-tagged isolates to colonize the surface of clover leaves by forming large aggregates.

More than meets the eye: the 'pink salmon patch'.

PubMed

Pallavi, Ranjita; Popescu-Martinez, Andrea

2014-08-28

Ocular adnexal lymphomas account for 1-2% of all non-Hodgkin's lymphomas. Conjunctiva is the primary site of involvement in one-third of cases. We present a case of a 47-year-old Hispanic woman who presented with left eye itching and irritation associated with a painless pink mass. Physical examination revealed the presence of a 'pink salmon-patch' involving her left medial conjunctiva. Orbital CT showed a subcentimeter left preseptal soft tissue density. Biopsy revealed a dense subepithelial lymphoid infiltrate comprised predominantly of B cells that did not coexpress CD5 or CD43. These findings were consistent with B-cell marginal zone lymphoma. Further staging assessment did not reveal disseminated disease. She had stage 1E extranodal marginal zone lymphoma as per Ann Arbor staging system. She received external beam radiotherapy to her left eye with complete resolution of the lymphoma in 2 months and continues to remain tumour free at 8-month follow-up. She will be followed up closely for development of any local (unilateral or contralateral eye) or systemic recurrence in the long run. 2014 BMJ Publishing Group Ltd.

Population Vulnerability to Biannual Cholera Outbreaks and Associated Macro-Scale Drivers in the Bengal Delta

PubMed Central

Akanda, Ali Shafqat; Jutla, Antarpreet S.; Gute, David M.; Sack, R. Bradley; Alam, Munirul; Huq, Anwar; Colwell, Rita R.; Islam, Shafiqul

2013-01-01

The highly populated floodplains of the Bengal Delta have a long history of endemic and epidemic cholera outbreaks, both coastal and inland. Previous studies have not addressed the spatio-temporal dynamics of population vulnerability related to the influence of underlying large-scale processes. We analyzed spatial and temporal variability of cholera incidence across six surveillance sites in the Bengal Delta and their association with regional hydroclimatic and environmental drivers. More specifically, we use salinity and flood inundation modeling across the vulnerable districts of Bangladesh to test earlier proposed hypotheses on the role of these environmental variables. Our results show strong influence of seasonal and interannual variability in estuarine salinity on spring outbreaks and inland flooding on fall outbreaks. A large segment of the population in the Bengal Delta floodplains remain vulnerable to these biannual cholera transmission mechanisms that provide ecologic and environmental conditions for outbreaks over large geographic regions. PMID:24019441

Pink-beam serial crystallography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meents, A.; Wiedorn, M. O.; Srajer, V.

Serial X-ray crystallography allows macromolecular structure determination at both X-ray free electron lasers (XFELs) and, more recently, synchrotron sources. The time resolution for serial synchrotron crystallography experiments has been limited to millisecond timescales with monochromatic beams. The polychromatic, “pink”, beam provides a more than two orders of magnitude increased photon flux and hence allows accessing much shorter timescales in diffraction experiments at synchrotron sources. Here we report the structure determination of two different protein samples by merging pink-beam diffraction patterns from many crystals, each collected with a single 100 ps X-ray pulse exposure per crystal using a setup optimized formore » very low scattering background. In contrast to experiments with monochromatic radiation, data from only 50 crystals were required to obtain complete datasets. The high quality of the diffraction data highlights the potential of this method for studying irreversible reactions at sub-microsecond timescales using high-brightness X-ray facilities.« less

Pink-beam serial crystallography

DOE PAGES

Meents, A.; Wiedorn, M. O.; Srajer, V.; ...

2017-11-03

Serial X-ray crystallography allows macromolecular structure determination at both X-ray free electron lasers (XFELs) and, more recently, synchrotron sources. The time resolution for serial synchrotron crystallography experiments has been limited to millisecond timescales with monochromatic beams. The polychromatic, “pink”, beam provides a more than two orders of magnitude increased photon flux and hence allows accessing much shorter timescales in diffraction experiments at synchrotron sources. Here we report the structure determination of two different protein samples by merging pink-beam diffraction patterns from many crystals, each collected with a single 100 ps X-ray pulse exposure per crystal using a setup optimized formore » very low scattering background. In contrast to experiments with monochromatic radiation, data from only 50 crystals were required to obtain complete datasets. The high quality of the diffraction data highlights the potential of this method for studying irreversible reactions at sub-microsecond timescales using high-brightness X-ray facilities.« less

Consumption demand of juvenile pink salmon in Prince William Sound and the coastal Gulf of Alaska in relation to prey biomass

NASA Astrophysics Data System (ADS)

Cross, Alison D.; Beauchamp, David A.; Armstrong, Janet L.; Blikshteyn, Mikhail; Boldt, Jennifer L.; Davis, Nancy D.; Haldorson, Lewis J.; Moss, Jamal H.; Myers, Katherine W.; Walker, Robert V.

2005-01-01

Prince William Sound hatcheries release over 600 million pink salmon ( Oncorhynchus gorbuscha) fry each year. The effect of the additional consumption demand by hatchery fish on prey biomass in Prince William Sound and the coastal Gulf of Alaska is unknown. The objectives of this study were to: (1) use bioenergetics models to compare spatial and temporal variation in the consumption demand and growth efficiency of hatchery and wild juvenile pink salmon in Prince William Sound and the coastal Gulf of Alaska between May and October 2001; and (2) compare localized population-level consumption in each region to the standing stock biomass of coexisting prey. In order to achieve observed growth, juvenile pink salmon consumed at 64-107% of their theoretical maximum consumption rate. Individual juvenile pink salmon consumed an average of 366.5 g of prey from marine entry through October of their first growing season. Growth efficiency ranged from 18.9% to 33.8% over the model simulation period. Juvenile salmon that migrated to the Gulf of Alaska grew more efficiently than those that remained in Prince William Sound until August, but after August juvenile salmon in Prince William Sound grew more efficiently than those in the Gulf of Alaska due to differences in prey quality between regions. Temperatures did not vary much between regions; thus differences in the thermal experience of juvenile pink salmon did not affect growth, consumption, and growth efficiency as much as the effects of different prey quality. Consumption demand by juvenile pink salmon exceeded the average standing stock biomass of key prey (large copepods, pteropods, hyperiid amphipods, and larvaceans) during some months. Our results are consistent with advection and production of these prey replenishing the forage base, or the reliance of individual pink salmon on high-density prey patches that occur at finer temporal scales than we were capable of sampling.

An Efficient Composition for Bengal Lights

NASA Astrophysics Data System (ADS)

Comet, M.; Schreyeck, L.; Fuzellier, H.

2002-01-01

Fuel-oxidizer mixtures based on potassium chlorate or sodium chlorate are well known. These mixtures have interesting properties of deflagration and are often used in propellants. Drastic reactivity of alkaline chlorates with ammonium salts due to the formation of ammonium chlorate NH4ClO3, a very unstable salt, is famous. By analogy, we tested the reactivity of different molecules containing nitrogen atoms, and we found an efficient fuel-oxidizer composed of potassium chlorate and thiocarbamide. Impressive bengal lights of various colors can easily be achieved using this basic composition.

Mucuna pruriens (Velvet bean) rescues motor, olfactory, mitochondrial and synaptic impairment in PINK1B9 Drosophila melanogaster genetic model of Parkinson's disease.

PubMed

Poddighe, Simone; De Rose, Francescaelena; Marotta, Roberto; Ruffilli, Roberta; Fanti, Maura; Secci, Pietro Paolo; Mostallino, Maria Cristina; Setzu, Maria Dolores; Zuncheddu, Maria Antonietta; Collu, Ignazio; Solla, Paolo; Marrosu, Francesco; Kasture, Sanjay; Acquas, Elio; Liscia, Anna

2014-01-01

The fruit fly Drosophila melanogaster (Dm) mutant for PTEN-induced putative kinase 1 (PINK1B9) gene is a powerful tool to investigate physiopathology of Parkinson's disease (PD). Using PINK1B9 mutant Dm we sought to explore the effects of Mucuna pruriens methanolic extract (Mpe), a L-Dopa-containing herbal remedy of PD. The effects of Mpe on PINK1B9 mutants, supplied with standard diet to larvae and adults, were assayed on 3-6 (I), 10-15 (II) and 20-25 (III) days old flies. Mpe 0.1% significantly extended lifespan of PINK1B9 and fully rescued olfactory response to 1-hexanol and improved climbing behavior of PINK1B9 of all ages; in contrast, L-Dopa (0.01%, percentage at which it is present in Mpe 0.1%) ameliorated climbing of only PINK1B9 flies of age step II. Transmission electron microscopy analysis of antennal lobes and thoracic ganglia of PINK1B9 revealed that Mpe restored to wild type (WT) levels both T-bars and damaged mitochondria. Western blot analysis of whole brain showed that Mpe, but not L-Dopa on its own, restored bruchpilot (BRP) and tyrosine hydroxylase (TH) expression to age-matched WT control levels. These results highlight multiple sites of action of Mpe, suggesting that its effects cannot only depend upon its L-Dopa content and support the clinical observation of Mpe as an effective medication with intrinsic ability of delaying the onset of chronic L-Dopa-induced long-term motor complications. Overall, this study strengthens the relevance of using PINK1B9 Dm as a translational model to study the properties of Mucuna pruriens for PD treatment.

Laboratory evidence for short and long-term damage to pink salmon incubating in oiled gravel

DOE Office of Scientific and Technical Information (OSTI.GOV)

Heintz, R.; Rice, S.; Wiedmer, M.

1995-12-31

Pink salmon, incubating in gravel contaminated with crude oil, demonstrated immediate and delayed responses in the laboratory at doses consistent with the concentrations observed in oiled streams in Prince William Sound. The authors incubated pink salmon embryos in a simulated intertidal environment with gravel contaminated by oil from the Exxon Valdez. During the incubation and emergence periods the authors quantified dose-response curves for characters affected directly by the oil. After emergence, fish were coded wire tagged and released, or cultured in netpens. Delayed responses have been observed among the cultured fish, and further observations will be made when coded wiremore » tagged fish return in September 1995. The experiments have demonstrated that eggs need not contact oiled gravel to experience increased mortality, and doses as low as 17 ppb tPAH in water can have delayed effects on growth. A comparison of sediment tPAH concentrations from streams in Prince William Sound with these laboratory data suggests that many 1989 brood pink salmon were exposed to deleterious quantities of oil.« less

Distribution of Heavy Metals in Surface Sediments of the Bay of Bengal Coast

PubMed Central

Hasan, M. R.; Khan, M.; Aktar, S.; Fatema, K.

2017-01-01

The concentrations of major (Si, Al, Ca, Fe, and K) and minor (Cd, Mn, Ni, Pb, U, Zn, Co, Cr, As, Cu, Rb, Sr, and Zr,) elements in the surficial sediments were studied in an attempt to establish their concentration in the Bengal coast. It was revealed that the majority of the trace elements have been introduced into the Bengal marine from the riverine inflows that are also affected by the impact of industrial, ship breaking yard, gas production plant, and urban wastes. The concentration of heavy metals was measured using Atomic Absorption Spectroscopy and Energy Dispersive X-ray fluorescence instruments. The highest concentrations for several trace elements were thus recorded which generally decrease with distance from the coast. It was observed that the heavy metal concentrations in the sediments generally met the criteria of international marine sediment quality. However, both the contamination factor and pollution load index values suggested the elevation of some metals' concentrations in the region. Constant monitoring of the Bengal coast water quality needs to be recorded with a view to minimizing the risk of health of the population and the detrimental impacts on the aquatic ecosystem. PMID:28255298

Curcumin Rescues a PINK1 Knock Down SH-SY5Y Cellular Model of Parkinson's Disease from Mitochondrial Dysfunction and Cell Death.

PubMed

van der Merwe, Celia; van Dyk, Hayley Christy; Engelbrecht, Lize; van der Westhuizen, Francois Hendrikus; Kinnear, Craig; Loos, Ben; Bardien, Soraya

2017-05-01

Parkinson's disease (PD) is a neurodegenerative disorder characterised by the loss of dopaminergic neurons in the substantia nigra. Mutations in the PINK1 gene result in an autosomal recessive form of early-onset PD. PINK1 plays a vital role in mitochondrial quality control via the removal of dysfunctional mitochondria. The aim of the present study was to create a cellular model of PD using siRNA-mediated knock down of PINK1 in SH-SY5Y neuroblastoma cells The possible protective effects of curcumin, known for its many beneficial properties including antioxidant and anti-inflammatory effects, was tested on this model in the presence and absence of paraquat, an additional stressor. PINK1 siRNA and control cells were separated into four treatment groups: (i) untreated, (ii) treated with paraquat, (iii) pre-treated with curcumin then treated with paraquat, or (iv) treated with curcumin. Various parameters of cellular and mitochondrial function were then measured. The PINK1 siRNA cells exhibited significantly decreased cell viability, mitochondrial membrane potential (MMP), mitochondrial respiration and ATP production, and increased apoptosis. Paraquat-treated cells exhibited decreased cell viability, increased apoptosis, a more fragmented mitochondrial network and decreased MMP. Curcumin pre-treatment followed by paraquat exposure rescued cell viability and increased MMP and mitochondrial respiration in control cells, and significantly decreased apoptosis and increased MMP and maximal respiration in PINK1 siRNA cells. These results highlight a protective effect of curcumin against mitochondrial dysfunction and apoptosis in PINK1-deficient and paraquat-exposed cells. More studies are warranted to further elucidate the potential neuroprotective properties of curcumin.

STS-54 Earth observation of a ship wake in the Bay of Bengal

NASA Technical Reports Server (NTRS)

1993-01-01

STS-54 Earth observation taken aboard Endeavour, Orbiter Vehicle (OV) 105, is of a ship wake in the Bay of Bengal. The sun glint pattern on the ocean reveals many patterns of sea surface roughness related to currents, waves, wind roughening, and biology that and are not apparent when the ocean is viewed away from the sun's reflection. In this view of the Bay of Bengal, southeast of Madras, India, sun glint highlights convergence zones between ocean currents (bright, linear features), a eddy, and the wake of a ship. In several locations where the ship has passed areas of current shear, the ship wake is distorted, indicating the relative current direction.

Evidence for the existence of Persian Gulf Water and Red Sea Water in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Jain, Vineet; Shankar, D.; Vinayachandran, P. N.; Kankonkar, A.; Chatterjee, Abhisek; Amol, P.; Almeida, A. M.; Michael, G. S.; Mukherjee, A.; Chatterjee, Meenakshi; Fernandes, R.; Luis, R.; Kamble, Amol; Hegde, A. K.; Chatterjee, Siddhartha; Das, Umasankar; Neema, C. P.

2017-05-01

The high-salinity water masses that originate in the North Indian Ocean are Arabian Sea High-Salinity Water (ASHSW), Persian Gulf Water (PGW), and Red Sea Water (RSW). Among them, only ASHSW has been shown to exist in the Bay of Bengal. We use CTD data from recent cruises to show that PGW and RSW also exist in the bay. The presence of RSW is marked by a deviation of the salinity vertical profile from a fitted curve at depths ranging from 500 to 1000 m; this deviation, though small (of the order of 0.005 psu and therefore comparable to the CTD accuracy of 0.003 psu), is an order of magnitude larger than the 0.0003 psu fluctuations associated with the background turbulence or instrument noise in this depth regime, allowing us to infer the existence of RSW throughout the bay. PGW is marked by the presence of a salinity maximum at 200-450 m; in the southwestern bay, PGW can be distinguished from the salinity maximum due to ASHSW because of the intervening Arabian Sea Salinity Minimum. This salinity minimum and the maximum associated with ASHSW disappear east and north of the south-central bay (85°E, 8°N) owing to mixing between the fresher surface waters that are native to the bay (Bay of Bengal Water or BBW) with the high-salinity ASHSW. Hence, ASHSW is not seen as a distinct water mass in the northern and eastern bay and the maximum salinity over most of the bay is associated with PGW. The surface water over most of the bay is therefore a mixture of ASHSW and the low-salinity BBW. As a corollary, we can also infer that the weak oxygen peak seen within the oxygen-minimum zone in the bay at a depth of 250-400 m is associated with PGW. The hydrographic data also show that these three high-salinity water masses are advected into the bay by the Summer Monsoon Current, which is seen to be a deep current extending to 1000 m. These deep currents extend into the northern bay as well, providing a mechanism for spreading ASHSW, PGW, and RSW throughout the bay.

Economic Evaluation of Munitions Manufacturing Pink Wastewater Treatment Alternatives Using a Present Value-Unit Cost Methodology

DTIC Science & Technology

1982-02-01

BACKGROUND 1 1.2 TECHNICAL APPROACH 3 1.3 OBJECTIVES 3 2.0 INVESTIGATION 5 2.1 LITERATURE SEARCH 5 2.2 SITE ViSITS 6 2.3 PINK WATER SOURCES AND...Scale 10 5 and 106 GPD Plant Designs 13 3.1 Matrix of Pink Water Treatment Systems Compared on a PVUC Basis 28 3.2 Calculated Capital & Annual... 5 Year Planning Horizon 109 3.6 Calculated PVUC ($/K-GAL) for Each Alternative - 1,000,000 GPD - 5 Year Planning Horizon 110 3.7 Calculated Annual

Hydroclimatic mechanisms of cholera transmission in the Bengal Delta

NASA Astrophysics Data System (ADS)

Tretkoff, Ernie

2011-07-01

Cholera, a deadly waterborne disease, remains a major threat in many areas of the world, including the Bengal Delta region. In this region, cholera outbreaks have two annual peaks; the first occurs during the dry season in the spring, and the second occurs in the fall following the wet season. However, the large-scale hydroclimatic processes underlying the propagation of the disease have not been well understood. Akanda et al. show that cholera outbreaks in the Bengal Delta region propagate from the coast to inland and from spring to fall following two distinct transmission cycles. The first outbreak begins in the spring near the coast when northward movement of plankton-rich seawater and increasing salinity promote the growth of cholera-causing bacteria in rivers, which are used for irrigation, sanitation, and consumption. The second outbreak begins in the fall, after summer floods and monsoons affect sanitation conditions that aid in bacterial transmission by contaminating waters over much of Bangladesh. (Water Resources Research, doi:10.1029/ 2010WR009914, 2011)

Gene differentiation among ten endogamous groups of West Bengal, India.

PubMed

Chakraborty, R; Walter, H; Mukherjee, B N; Malhotra, K C; Sauber, P; Banerjee, S; Roy, M

1986-11-01

Ten endogamous populations of West Bengal, India have been surveyed for genetic variation in 12 systems. These populations encompass all social ranks in the caste hierarchy and cover almost the entire geographic area of the state. Gene diversity analysis suggests that these groups exhibit significant allele frequency variation at all but three loci. The overall genetic difference is not, however, in accord with the classification based on caste. Two low-ranking scheduled caste groups are, in fact, in close proximity with the high-caste ones, suggesting evidence of past generations of gene flow among them. Three different clusters of groups emerge from the present data, providing support for the anthropologic assertion that in Bengal Proto-Australoid, Caucasoid, and Mongoloid racial elements generally coexist. However, these three components are not uniformly present in all groups. Geographic separation of the groups is a strong determinant of the gene differentiation that exists among these populations.

Albumin Overload and PINK1/Parkin Signaling-Related Mitophagy in Renal Tubular Epithelial Cells.

PubMed

Tan, Jin; Xie, Qi; Song, Shuling; Miao, Yuyang; Zhang, Qiang

2018-03-01

BACKGROUND Albumin, as a major urinary protein component, is a risk factor for chronic kidney disease progression. Mitochondrial dysfunction is one of the main causes of albumin-induced proximal tubule cells injury. Mitophagy is considered as a pivotal protective mechanism for the elimination of dysfunctional mitochondria. The objective of this research was to determine whether albumin overload-induced mitochondrial dysfunction can activate PINK1/Parkin-mediated mitophagy in renal tubular epithelial cells (TECs). MATERIAL AND METHODS Immunofluorescence assay and Western blot assay were used to detect the effects of albumin overload on autophagy marker protein LC3. Transmission electron microscopy and Western blot assay were used to investigate the role of albumin in mitochondrial injury. Western blot assay and co-localization of acidic lysosomes and mitochondria assay were employed to detect the activation of mitophagy induced by albumin. Finally, we explored the role of PINK1/Parkin signaling in albumin-induced mitophagy by inhibiting mitophagy by knockdown of PARK2 (Parkin) level. RESULTS Immunofluorescence and Western blot results showed that the expression level of LC3-II increased, and the maximum increase point was observed after 8 h of albumin treatment. Transmission electron microscopy results demonstrated that albumin overload-induced mitochondrial injury and quantity of autophagosomes increased. Additionally, expression of PINK1 and cytosolic cytochrome C increased and mitochondria cytochrome C decreased in the albumin group. The co-localization of acidic lysosomes and mitochondria demonstrated that the number of albumin overload-induced mitophagy-positive dots increased. The transient transfection of PARK2 siRNA result showed knockdown of the expression level of PARK2 can inhibit mitophagy induced by albumin. CONCLUSIONS In conclusion, our study suggests that mitochondrial dysfunction activates the PINK1/Parkin signaling and mitophagy in renal tubular

Instantaneous radioiodination of rose bengal at room temperature and a cold-kit therefor. [DOE patent application

DOEpatents

O'Brien, H. Jr.; Hupf, H.B.; Wanek, P.M.

The disclosure relates to the radioiodination of rose bengal at room temperature and a cold-kit therefor. A purified rose bengal tablet is stirred into acidified ethanol at or near room temperature, until a suspension forms. Reductant-free /sup 125/I/sup -/ is added and the resulting mixture stands until the exchange label reaction occurs at room temperature. A solution of sterile isotonic phosphate buffer and sodium hydroxide is added and the final resulting mixture is sterilized by filtration.

Petroleum hydrocarbon concentrations in eight mollusc species along Tamilnadu coast, Bay of Bengal, India.

PubMed

Veerasingam, S; Venkatachalapathy, R; Sudhakar, S; Raja, P; Rajeswari, V

2011-01-01

Eight mollusc species and sediment samples collected from three different stations along Tamilnadu coast, Bay of Bengal, India were analysed for the levels of petroleum hydrocarbons to elucidate the status of the petroleum residues in mollusc meant for human consumption. The concentrations of petroleum hydrocarbons in sediments along Tamilnadu coast varied from 5.04-25.5 microg/g dw (dry weight). High concentration of petroleum hydrocarbons in the sediment of Uppanar estuary (25.5 +/- 1.45 microg/g dw) was perhaps land and marine based anthropogenic sources of this region. The petroleum hydrocarbon residues in eight mollusc species collected from Uppanar, Vellar and Coleroon estuaries varied between 2.44-6.04 microg/g ww (wet weight). Although the concentration of petroleum hydrocarbons in sediment of the Uppanar region was markedly higher than the background, the petroleum hydrocarbon residues in mollusc collected from Uppanar estuary did not suggest bioaccumulation. The results signified that industrial growth has affected the aquatic environments and regular monitoring will help to adopt stringent pollution control measures for better management of the aquatic region.

Mucuna pruriens (Velvet bean) Rescues Motor, Olfactory, Mitochondrial and Synaptic Impairment in PINK1B9 Drosophila melanogaster Genetic Model of Parkinson’s Disease

PubMed Central

Ruffilli, Roberta; Fanti, Maura; Secci, Pietro Paolo; Mostallino, Maria Cristina; Setzu, Maria Dolores; Zuncheddu, Maria Antonietta; Collu, Ignazio; Solla, Paolo; Marrosu, Francesco; Kasture, Sanjay; Acquas, Elio; Liscia, Anna

2014-01-01

The fruit fly Drosophila melanogaster (Dm) mutant for PTEN-induced putative kinase 1 (PINK1B9) gene is a powerful tool to investigate physiopathology of Parkinson's disease (PD). Using PINK1B9 mutant Dm we sought to explore the effects of Mucuna pruriens methanolic extract (Mpe), a L-Dopa-containing herbal remedy of PD. The effects of Mpe on PINK1B9 mutants, supplied with standard diet to larvae and adults, were assayed on 3–6 (I), 10–15 (II) and 20–25 (III) days old flies. Mpe 0.1% significantly extended lifespan of PINK1B9 and fully rescued olfactory response to 1-hexanol and improved climbing behavior of PINK1B9 of all ages; in contrast, L-Dopa (0.01%, percentage at which it is present in Mpe 0.1%) ameliorated climbing of only PINK1B9 flies of age step II. Transmission electron microscopy analysis of antennal lobes and thoracic ganglia of PINK1B9 revealed that Mpe restored to wild type (WT) levels both T-bars and damaged mitochondria. Western blot analysis of whole brain showed that Mpe, but not L-Dopa on its own, restored bruchpilot (BRP) and tyrosine hydroxylase (TH) expression to age-matched WT control levels. These results highlight multiple sites of action of Mpe, suggesting that its effects cannot only depend upon its L-Dopa content and support the clinical observation of Mpe as an effective medication with intrinsic ability of delaying the onset of chronic L-Dopa-induced long-term motor complications. Overall, this study strengthens the relevance of using PINK1B9 Dm as a translational model to study the properties of Mucuna pruriens for PD treatment. PMID:25340511

Biochemical and chemical characterization of pink-pigmented oxidative bacteria.

PubMed Central

Wallace, P L; Hollis, D G; Weaver, R E; Moss, C W

1990-01-01

The biochemical and chemical characteristics were determined for 156 clinical isolates of pink-pigmented bacteria that are similar to but distinct from Methylobacterium extorquens (synonymous with Pseudomonas mesophilica). These isolates were gram-negative, nonfermentative, usually nonvacuolated, coccoid rods; all grew at 35 degrees C and were catalase and urease positive; the majority grew on MacConkey agar and were variable for oxidase production and motility. On the basis of oxidation of xylose and mannitol and hydrolysis of esculin, these 156 strains were subdivided into four groups that were designated "pink coccoid" groups I, II, III, and IV. Groups I, II, and III are similar to an unnamed taxon described by Gilardi and Faur in 1984; only strains of group IV hydrolyze esculin. The cellular fatty acid compositions of strains of groups I, II, and III were essentially identical and differed from strains of group IV by the absence of 3-OH-C14:0 and the presence of C19:0 delta and 2-OH-C19:0 delta. The fatty acid composition of group IV strains was most similar to that of M. extorquens but differed by the presence of small amounts of two C17:1 acids, 3-OH-C16:0, and 2-OH-C18:1. PMID:2332467

Biochemical and chemical characterization of pink-pigmented oxidative bacteria.

PubMed

Wallace, P L; Hollis, D G; Weaver, R E; Moss, C W

1990-04-01

The biochemical and chemical characteristics were determined for 156 clinical isolates of pink-pigmented bacteria that are similar to but distinct from Methylobacterium extorquens (synonymous with Pseudomonas mesophilica). These isolates were gram-negative, nonfermentative, usually nonvacuolated, coccoid rods; all grew at 35 degrees C and were catalase and urease positive; the majority grew on MacConkey agar and were variable for oxidase production and motility. On the basis of oxidation of xylose and mannitol and hydrolysis of esculin, these 156 strains were subdivided into four groups that were designated "pink coccoid" groups I, II, III, and IV. Groups I, II, and III are similar to an unnamed taxon described by Gilardi and Faur in 1984; only strains of group IV hydrolyze esculin. The cellular fatty acid compositions of strains of groups I, II, and III were essentially identical and differed from strains of group IV by the absence of 3-OH-C14:0 and the presence of C19:0 delta and 2-OH-C19:0 delta. The fatty acid composition of group IV strains was most similar to that of M. extorquens but differed by the presence of small amounts of two C17:1 acids, 3-OH-C16:0, and 2-OH-C18:1.

Pink light emitting long-lasting phosphorescence in Sm 3+-doped CdSiO 3

NASA Astrophysics Data System (ADS)

Lei, Bingfu; Liu, Yingliang; Liu, Jie; Ye, Zeren; Shi, Chunshan

2004-04-01

Novel pink light emitting long-lasting afterglow CdSiO 3:Sm 3+ phosphors are prepared by the conventional high-temperature solid-state method and their luminescent properties are investigated. XRD and photoluminescence (PL) spectra are used to characterize the synthesized phosphors. The phosphors are well crystallized by calcinations at 1050°C for 5 h. These phosphors emit pink light and show long-lasting phosphorescence after they are excited with 254 nm ultraviolet light. The phosphorescence lasts for nearly 5 h in the light perception of the dark-adapted human eye (0.32 mcd/m 2). The phosphorescence mechanism is also investigated. All the results indicate that these phosphors have promising potential practical applications.

STS-54 Earth observation of a ship wake in the Bay of Bengal

NASA Image and Video Library

1993-01-19

STS054-72-056 (13-19 Jan 1993) --- A ship wake in the Bay of Bengal is noticeable in this 70mm frame. The sun glint pattern on the ocean reveals many patterns of sea surface roughness related to currents, waves, wind roughening, and biology that and are not apparent when the ocean is viewed away from the Sun's reflection. In this view of the Bay of Bengal, southeast of Madras, India, sun glint highlights convergence zones between ocean currents (bright, linear features), a eddy, and the wake of a ship. In several locations where the ship has passed areas of current shear, the ship wake is distorted, indicating the relative current direction.

Comparative transcriptomics of Atlantic Salmo salar, chum Oncorhynchus keta and pink salmon O. gorbuscha during infections with salmon lice Lepeophtheirus salmonis.

PubMed

Sutherland, Ben J G; Koczka, Kim W; Yasuike, Motoshige; Jantzen, Stuart G; Yazawa, Ryosuke; Koop, Ben F; Jones, Simon R M

2014-03-15

Salmon species vary in susceptibility to infections with the salmon louse (Lepeophtheirus salmonis). Comparing mechanisms underlying responses in susceptible and resistant species is important for estimating impacts of infections on wild salmon, selective breeding of farmed salmon, and expanding our knowledge of fish immune responses to ectoparasites. Herein we report three L. salmonis experimental infection trials of co-habited Atlantic Salmo salar, chum Oncorhynchus keta and pink salmon O. gorbuscha, profiling hematocrit, blood cortisol concentrations, and transcriptomic responses of the anterior kidney and skin to the infection. In all trials, infection densities (lice per host weight (g)) were consistently highest on chum salmon, followed by Atlantic salmon, and lowest in pink salmon. At 43 days post-exposure, all lice had developed to motile stages, and infection density was uniformly low among species. Hematocrit was reduced in infected Atlantic and chum salmon, and cortisol was elevated in infected chum salmon. Systemic transcriptomic responses were profiled in all species and large differences in response functions were identified between Atlantic and Pacific (chum and pink) salmon. Pink and chum salmon up-regulated acute phase response genes, including complement and coagulation components, and down-regulated antiviral immune genes. The pink salmon response involved the largest and most diverse iron sequestration and homeostasis mechanisms. Pattern recognition receptors were up-regulated in all species but the active components were often species-specific. C-type lectin domain family 4 member M and acidic mammalian chitinase were specifically up-regulated in the resistant pink salmon. Experimental exposures consistently indicated increased susceptibility in chum and Atlantic salmon, and resistance in pink salmon, with differences in infection density occurring within the first three days of infection. Transcriptomic analysis suggested candidate resistance

Evaluation of intraspecies interactions in biofilm formation by Methylobacterium species isolated from pink-pigmented household biofilms.

PubMed

Xu, Fang-Fang; Morohoshi, Tomohiro; Wang, Wen-Zhao; Yamaguchi, Yuka; Liang, Yan; Ikeda, Tsukasa

2014-01-01

Concern regarding household biofilms has grown due to their widespread existence and potential to threaten human health by serving as pathogen reservoirs. Previous studies identified Methylobacterium as one of the dominant genera found in household biofilms. In the present study, we examined the mechanisms underlying biofilm formation by using the bacterial consortium found in household pink slime. A clone library analysis revealed that Methylobacterium was the predominant genus in household pink slime. In addition, 16 out of 21 pink-pigmented bacterial isolates were assigned to the genus Methylobacterium. Although all of the Methylobacterium isolates formed low-level biofilms, the amount of the biofilms formed by Methylobacterium sp. P-1M and P-18S was significantly increased by co-culturing with other Methylobacterium strains that belonged to a specific phylogenetic group. The single-species biofilm was easily washed from the glass surface, whereas the dual-species biofilm strongly adhered after washing. A confocal laser scanning microscopy analysis showed that the dual-species biofilms were significantly thicker and tighter than the single-species biofilms.

Evaluation of Intraspecies Interactions in Biofilm Formation by Methylobacterium Species Isolated from Pink-Pigmented Household Biofilms

PubMed Central

Xu, Fang-Fang; Morohoshi, Tomohiro; Wang, Wen-Zhao; Yamaguchi, Yuka; Liang, Yan; Ikeda, Tsukasa

2014-01-01

Concern regarding household biofilms has grown due to their widespread existence and potential to threaten human health by serving as pathogen reservoirs. Previous studies identified Methylobacterium as one of the dominant genera found in household biofilms. In the present study, we examined the mechanisms underlying biofilm formation by using the bacterial consortium found in household pink slime. A clone library analysis revealed that Methylobacterium was the predominant genus in household pink slime. In addition, 16 out of 21 pink-pigmented bacterial isolates were assigned to the genus Methylobacterium. Although all of the Methylobacterium isolates formed low-level biofilms, the amount of the biofilms formed by Methylobacterium sp. P-1M and P-18S was significantly increased by co-culturing with other Methylobacterium strains that belonged to a specific phylogenetic group. The single-species biofilm was easily washed from the glass surface, whereas the dual-species biofilm strongly adhered after washing. A confocal laser scanning microscopy analysis showed that the dual-species biofilms were significantly thicker and tighter than the single-species biofilms. PMID:25381715

The background state leading to arsenic contamination of Bengal basin groundwater.

PubMed

Adel, Miah M

2005-12-01

The Bengal basin has the world's densest water diversion constructions on the natural courses of rivers. The most damaging water diversion construction is the Farakka Barrage upon the international River Ganges. The diversion of water through this barrage and other constructions upstream of it has reduced the Ganges flow rate by 2.5 times. The resulting downstream effects are the depletion of surface water resources, more withdrawal than recharge of groundwater, sinking groundwater table, spread in depth and extension of the vadose zone, changes in surface features, climatic changes, etc. An investigation was carried out to find the contributions of water diversion to the arsenic contamination of groundwater in the Bengal basin. The reasonable scenario for arsenic contamination is the oxygen deficiency in groundwater and aeration of arsenopyrites buried in the sediment that would remain under water prior to 1975. The mineral forms water-soluble compounds of arsenic when react with atmospheric oxygen. These soluble arsenic compounds infiltrates to the groundwater. This article summarizes the short-time and incomplete study-based quick conclusions reached by investigators that have totally avoided the vital issue of water diversion. It then shows the depleting condition of the water resources under continuing diversions, the generation of favorable condition for arsenic release, the reasons for low sulfur concentration, the reason for first contamination in the Hugly basin, and the hindrance to water's self-purification. The articles advocates that the restoration of the virgin wetland ecosystems in the Bengal basin following the stoppage of the inordinate amount of unilateral upstream water withdrawals can remove the catastrophe.

DNA:DNA hybridization studies on the pink-pigmented facultative methylotrophs.

PubMed

Hood, D W; Dow, C S; Green, P N

1987-03-01

The genomic relatedness among 36 strains of pink-pigmented facultatively methylotrophic bacteria (PPFMs) was estimated by determination of DNA base composition and by DNA:DNA hybridization studies. A reproducible hybridization system was developed for the rapid analysis of multiple DNA samples. Results indicated that the PPFMs comprise four major and several minor homology groups, and that they should remain grouped in a single genus, Methylobacterium.

IDENTITY OF THE PINK-PIGMENTED METHANOL-OXIDIZING BACTERIA AS VIBRIO EXTORQUENS

PubMed Central

Stocks, Peter K.; McCleskey, C. S.

1964-01-01

Stocks, Peter K. (Louisiana State University, Baton Rouge), and C. S. McCleskey. Identity of the pink-pigmented methanol-oxidizing bacteria as Vibrio extorquens. J. Bacteriol. 88:1065–1070. 1964.—Pink-pigmented bacteria isolated from enrichment cultures of methane oxidizers were found to possess similar morphological, cultural, and physiological characteristics. All the strains utilized methanol, formate, oxalate, succinate, glycerol, and benzene as sole carbon sources; methanol, formate, and glycerol afforded best growth. Most strains utilized fructose and ribose; other carbohydrates tested were not available as carbon and energy sources. There was strain variation in the use of hexane, heptane, n-propanol, n-butanol, acetate, and propionate. Methane, ethane, n-propane, and n-butane were not utilized. Our isolates, and Pseudomonas methanica of Harrington and Kallio (not the methane-dependent P. methanica of Dworkin and Foster), Pseudomonas AM1 of Peele and Quayle, Pseudomonas PRL-W4 of Kaneda and Roxburgh, and Protaminobacter ruber den Dooren de Jong are nearly identical with Vibrio extorquens (Bassalik) Bhat and Barker, and should be considered the same species. Images PMID:14219020

IDENTITY OF THE PINK-PIGMENTED METHANOL-OXIDIZING BACTERIA AS VIBRIO EXTORQUENS.

PubMed

STOCKS, P K; MCCLESKEY, C S

1964-10-01

Stocks, Peter K. (Louisiana State University, Baton Rouge), and C. S. McCleskey. Identity of the pink-pigmented methanol-oxidizing bacteria as Vibrio extorquens. J. Bacteriol. 88:1065-1070. 1964.-Pink-pigmented bacteria isolated from enrichment cultures of methane oxidizers were found to possess similar morphological, cultural, and physiological characteristics. All the strains utilized methanol, formate, oxalate, succinate, glycerol, and benzene as sole carbon sources; methanol, formate, and glycerol afforded best growth. Most strains utilized fructose and ribose; other carbohydrates tested were not available as carbon and energy sources. There was strain variation in the use of hexane, heptane, n-propanol, n-butanol, acetate, and propionate. Methane, ethane, n-propane, and n-butane were not utilized. Our isolates, and Pseudomonas methanica of Harrington and Kallio (not the methane-dependent P. methanica of Dworkin and Foster), Pseudomonas AM1 of Peele and Quayle, Pseudomonas PRL-W4 of Kaneda and Roxburgh, and Protaminobacter ruber den Dooren de Jong are nearly identical with Vibrio extorquens (Bassalik) Bhat and Barker, and should be considered the same species.

Raman tomography of Himalayan-derived muds (Bengal Shelf)

NASA Astrophysics Data System (ADS)

Borromeo, Laura; Andò, Sergio; Aliatis, Irene; France-Lanord, Christian; Garzanti, Eduardo

2013-04-01

Raman mineral analysis (RaMAn) is an innovative, efficient and user-friendly technique representing the ideal tool to perform provenance analysis of silt-sized sediments, which represent most of the sediment flux in river systems and the predominant grain size in large deltas and submarine fans (Andò et al., 2011). RaMAn allows in fact the reliable recognition of detrital grains down to 5 μm in size. The Ganga-Brahmaputra estuary in Bangladesh represents the largest single entry point of detritus in the world oceans. Between 1 and 2 billion tons of sediment each year has been reaching the Bengal Sea during most of the Neogene, feeding the world largest submarine fan (Goodbred and Kuehl, 2000; Galy and France-Lanord 2001). In order to detect the compositional differences between the fluvial environment (Garzanti et al., 2010; 2011) and the deep sea (Thompson, 1974; Yokohama et al., 1990) as well as the mineralogical variability associated with hydrodynamic sorting in the delta plain and proximal shelf, we have determined the mineralogical composition of largely Himalayan-derived muds deposited on the Bengal Shelf. Mineralogical analyses were carried out separately for four grain-size classes of 4 samples: (5-10 μm, 10-15 μm, 15-32 μm, >32 μm). Each class was separated into low-density (<2.90 g/cm3) and high-density fraction (>2.90 g/cm3) by centrifuging in sodium polytungstate and recovered by partial freezing with liquid nitrogen. Accurate quantitative mineralogical data were obtained by identifying at least 100 grains on each slide. RaMAn resulted to be essential for confident mineral identification, and helped us to reveal the nature of altered and opaque grains that cannot be identified under the optical microscope. Andò S.,Vignola P., Garzanti E., (2011). Raman counting: a new method to determine provenance of silt. Rendiconti Lincei, 22, Issue 4, pp 327-347; Galy A., France-Lanord C., (2001), Higher erosion rates in the Himalaya geochemical constraints

76 FR 70062 - Fraser River Sockeye and Pink Salmon Fisheries; Inseason Orders

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-10

...-XA803 Fraser River Sockeye and Pink Salmon Fisheries; Inseason Orders AGENCY: National Marine Fisheries...; inseason orders. SUMMARY: NMFS publishes Fraser River salmon inseason orders to regulate treaty and non-treaty (all citizen) commercial salmon fisheries in U.S. waters. The orders were issued by the Fraser...

78 FR 69002 - Fraser River Sockeye and Pink Salmon Fisheries; Inseason Orders

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-18

...-XC965 Fraser River Sockeye and Pink Salmon Fisheries; Inseason Orders AGENCY: National Marine Fisheries...; inseason orders. SUMMARY: NMFS publishes Fraser River salmon inseason orders to regulate treaty and non-treaty (all citizen) commercial salmon fisheries in U.S. waters. The orders were issued by the Fraser...

High Probability of Cyclone Development in the Bay of Bengal

NASA Image and Video Library

2014-05-22

The Joint Typhoon Warning Center states that formation of a significant tropical cyclone is possible in the Bay of Bengal within the next 12 - 24 hours as of 0730Z on May 21, 2014. Along with deep convective banding associated with a consolidating low-level circulation center, warm sea surface temperatures are conducive for further development. This image was taken by the Suomi NPP satellite's VIIRS instrument in two passes, the east pass around 0615Z and the west pass around 0755Z on May 21, 2014. Credit: NASA/NOAA/NPP/VIIRS The Joint Typhoon Warning Center states that formation of a significant tropical cyclone is possible in the Bay of Bengal within the next 12 - 24 hours as of 0730Z on May 21, 2014. Along with deep convective banding associated with a consolidating low-level circulation center, warm sea surface temperatures are conducive for further development. This image was taken by the Suomi NPP satellite's VIIRS instrument in two passes, the east pass around 0615Z and the west pass around 0755Z on May 21, 2014.

Pink slimed: Media framing of novel food technologies and risk related to ground beef and processed foods in the U.S.

PubMed

Runge, Kristin K; Chung, Jennifer H; Su, Leona Yi-Fan; Brossard, Dominique; Scheufele, Dietram A

2018-09-01

In March 2012 ABC World News Report aired a series of reports on lean finely textured beef (LFTB) that resulted in a 10-year low for beef prices and the bankruptcy of a major firm that produced LFTB. Using a random sample survey, we tested the effects of the media frame "pink slime" and industry frame "lean finely textured beef," alongside media use, food-related knowledge, trust in food-related institutions and preference for local, fresh, organic and GMO-free foods on perceptions of risk related to ground beef containing pink slime/LFTB, processed foods and red meat. The "pink slime" frame was strongly and positively associated with risk related to ground beef, but not risk related to red meat or processed foods. Attention to news stories about pink slime/LFTB was strongly associated with risk related to ground beef and processed foods, but not red meat. We found varying effects of food values, knowledge and trust on all three dependent variables. Implications are discussed. Copyright © 2018 Elsevier Ltd. All rights reserved.

Loss of Pink1 modulates synaptic mitochondrial bioenergetics in the rat striatum prior to motor symptoms: concomitant complex I respiratory defects and increased complex II-mediated respiration.

PubMed

Stauch, Kelly L; Villeneuve, Lance M; Purnell, Phillip R; Ottemann, Brendan M; Emanuel, Katy; Fox, Howard S

2016-12-01

Mutations in PTEN-induced putative kinase 1 (Pink1), a mitochondrial serine/threonine kinase, cause a recessive inherited form of Parkinson's disease (PD). Pink1 deletion in rats results in a progressive PD-like phenotype, characterized by significant motor deficits starting at 4 months of age. Despite the evidence of mitochondrial dysfunction, the pathogenic mechanism underlying disease due to Pink1-deficiency remains obscure. Striatal synaptic mitochondria from 3-month-old Pink1-deficient rats were characterized using bioenergetic and mass spectroscopy (MS)-based proteomic analyses. Striatal synaptic mitochondria from Pink1-deficient rats exhibit decreased complex I-driven respiration and increased complex II-mediated respiration compared with wild-type rats. MS-based proteomics revealed 69 of the 811 quantified mitochondrial proteins were differentially expressed between Pink1-deficient rats and controls. Down-regulation of several electron carrier proteins, which shuttle electrons to reduce ubiquinone at complex III, in the Pink1-knockouts suggests disruption of the linkage between fatty acid, amino acid, and choline metabolism and the mitochondrial respiratory system. These results suggest that complex II activity is increased to compensate for loss of electron transfer mechanisms due to reduced complex I activity and loss of electron carriers within striatal nerve terminals early during disease progression. This may contribute to the pathogenesis of PD. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Mesozooplankton production, grazing and respiration in the Bay of Bengal: Implications for net heterotrophy

NASA Astrophysics Data System (ADS)

Fernandes, Veronica; Ramaiah, N.

2016-03-01

Mesozooplankton samples were collected from the mixed layer along a central (along 88°E) and a western transect in the Bay of Bengal during four seasons covered between 2001 and 2006 in order to investigate spatio-temporal variability in their biomass. At these stations, grazing and respiration rates were measured from live zooplankton hauled in from the surface during December 2005. Akin to the mesozooplankton "paradox" in the central and eastern Arabian Sea, biomass in the mixed layer was more or less invariant in the central and western Bay of Bengal, even as the chl a showed marginal temporal variation. By empirical equation, the mesozooplankton production rate calculated to be 70-246 mg C m- 2 d- 1 is on par with the Arabian Sea. Contrary to the conventional belief, mesozooplankton grazing impact was up to 83% on primary production (PP). Low PP coupled with very high zooplankton production (70% of PP) along with abundant bacterial production (50% of the PP; Ramaiah et al., 2009) is likely to render the Bay of Bengal net heterotrophic, especially during the spring intermonsoon. Greater estimates of fecal pellet-carbon egestion by mesozooplankton compared to the average particulate organic carbon flux in sediment traps, implies that much of the matter is recycled by heterotrophic communities in the mixed layer facilitating nutrient regeneration for phytoplankton growth. We also calculated that over a third of the primary production is channelized for basin-wide zooplankton respiration that accounts for 52 Mt C annually. In the current scenario of global warming, if low (primary) productive warm pools like the Bay of Bengal continue to be net heterotrophic, negative implications like enhanced emission of CO2 to the atmosphere, increased particulate flux to the deeper waters and greater utilization of dissolved oxygen resulting in expansion of the existing oxygen minimum zone are imminent.

Ozone in the marine boundary layer of Bay of Bengal and Arabian Sea during post winter period - continental influence

NASA Astrophysics Data System (ADS)

Nair, Prabha R.; George, Susan K.; David, Liji Mary; Parameswaran, Krishnaswamy

Ozone plays a key role in controlling the oxidation capacity of the troposphere and hence the lifetime of a variety of trace gases in the atmosphere. In pristine marine boundary layer (MBL), entire chemistry is initiated by the photolysis of ozone and the subsequent formation of OH radical from water vapour. Also in such environment, photochemical destruction is considered as a major sink in global ozone budget. Even though large number of studies on near surface ozone has been carried out over land such studies are very few over oceanic environments. This paper presents the observational results on the spatial variations of near-surface ozone over Bay of Bengal and Arabian Sea as revealed by the cruise-based measurements (cruise No. SK223) conducted as part of Integrated Campaign for Aerosol gases and Radiation Budget (ICARB) under the Geosphere Biosphere Programme of Indian Space Research Organisation (IGBP). Online measurements of ozone have been carried out by using a UV Photometric Analyser (model 49C of Thermo Electron Corporation, USA). Ozone mixing ratio was observed to be significantly high over northern Bay of Bengal (20-28 ppb) compared to southern Bay of Bengal and Arabian Sea. Minimum levels of ozone ( 5 ppb) have been measured in the central Bay of Bengal region. Over Arabian Sea latitudinal variation was not prominently observed. The over all latitudinal gradient is estimated to be 1.2 ppb/o latitude over Bay of Bengal with longitudinal gradient showing variation depending on the latitude sector. It was maximum (of 1.2ppb/o longitude) over the mid Bay of Bengal region ( 15o N). Longitudinal variation was not significant over northern and southern regions. A close examination of surface airflow patterns and the air mass back trajectories revealed increase in ozone level associated with continental outflow from the northern and central parts of the subcontinent. The diurnal pattern also showed variations depending on the proximity to inhabited land

Trophic accumulation and depuration of mercury by blue crabs (Callinectes sapidus) and pink shrimp (Penaeus duorarum).

PubMed

Evans, D W; Kathman, R D; Walker, W W

2000-06-01

Mercury concentrations in blue crabs (Callinectes sapidus) collected from an area of mercury-contaminated sediments in Lavaca Bay, TX, USA, are more than an order of magnitude greater than concentrations in penaeid shrimp from the same area. Laboratory feeding experiments using mercury-contaminated fish as food showed that both blue crabs and pink shrimp (Penaeus duorarum) could accumulate mercury concentrations comparable to those in their food in 28 days. Calculated mercury assimilation efficiencies averaged 76% for blue crabs and 72% for pink shrimp. Significant depuration of mercury by blue crabs was not observed during a subsequent 28-day period, but pink shrimp lost mercury at a rate of about 0.012 day-1. Model calculations predict biomagnification factors of mercury of about two to three at steady state for both species. The large difference in observed concentrations of mercury in field-collected blue crabs and penaeid shrimp does not result from differences in efficiency of mercury assimilation from their food or from differences in excretion rates. It is more likely the result of differences in residence times in the contaminated area and of differences in feeding habits.

Oxidative stability of pork emulsion containing tomato products and pink guava pulp during refrigerated aerobic storage.

PubMed

Joseph, Serlene; Chatli, Manish K; Biswas, Ashim K; Sahoo, Jhari

2014-11-01

Lipid oxidation-induced quality problems can be minimized with the use of natural antioxidants. Antioxidant potential of tomato puree (10 %; T-1), tomato pulp (12.5 %; T-2), lyophilized tomato peel (6 %; T-3), and pink guava pulp (10 %; T-4) was evaluated in raw pork emulsion during refrigerated storage for 9 days under aerobic packaging. The lycopene and β-carotene content varied in pork emulsion as T-3 > T-1 > T-2 > T-4 and decreased (P < 0.05) during storage. The surface redness (a* value) increased (P < 0.05) with the incorporation of tomato products and pink guava pulp. Furthermore, metmyoglobin formation and lipid oxidation were lower (P < 0.05) in tomato- and guava-treated emulsions than in control. Overall, incorporation of tomato products and pink guava pulp improved the visual colour and odour scores of raw pork emulsion. These results indicated that tomato products and guava pulp can be utilized as sources of natural antioxidants in raw pork products to minimize lipid oxidation, off-odour development, and surface discolouration.

The Political Economy of English Education in Muslim Bengal: 1871-1912.

ERIC Educational Resources Information Center

Rahim, Aminur

1992-01-01

Examines explanations for lack of progress by Muslims in English education in East Bengal, colonial British India (now Bangladesh). Argues that urban-based, elitist English education failed to provide opportunities to rural Muslim farmers, and that, after the British formulated educational policies meeting Muslim needs, that community responded…

Trace metal dynamics in zooplankton from the Bay of Bengal during summer monsoon.

PubMed

Rejomon, G; Kumar, P K Dinesh; Nair, M; Muraleedharan, K R

2010-12-01

Trace metal (Fe, Co, Ni, Cu, Zn, Cd, and Pb) concentrations in zooplankton from the mixed layer were investigated at 8 coastal and 20 offshore stations in the western Bay of Bengal during the summer monsoon of 2003. The ecotoxicological importance of trace metal uptake was apparent within the Bay of Bengal zooplankton. There was a distinct spatial heterogeneity of metals, with highest concentrations in the upwelling zones of the southeast coast, moderate concentrations in the cyclonic eddy of the northeast coast, and lowest concentrations in the open ocean warm gyre regions. The average trace metal concentrations (μg g⁻¹) in coastal zooplankton (Fe, 44894.1 ± 12198.2; Co, 46.2 ± 4.6; Ni, 62.8 ± 6.5; Cu, 84.9 ± 6.7; Zn, 7546.8 ± 1051.7; Cd, 46.2 ± 5.6; Pb, 19.2 ± 2.6) were higher than in offshore zooplankton (Fe, 3423.4 ± 681.6; Co, 19.5 ± 3.81; Ni, 25.3 ± 7.3; Cu, 29.4 ± 4.2; Zn, 502.3 ± 124.3; Cd, 14.3 ± 2.9; Pb, 3.2 ± 2.0). A comparison of average trace metal concentrations in zooplankton from the Bay of Bengal showed enrichment of Fe, Co, Ni, Cu, Zn, Cd, and Pb in coastal zooplankton may be related to metal absorption from primary producers, and differences in metal concentrations in phytoplankton from coastal waters (upwelling zone and cyclonic eddy) compared with offshore waters (warm gyre). Zooplankton showed a great capacity for accumulations of trace metals, with average concentration factors of 4 867 929 ± 569 971, 246 757 ± 51 321, 337 180 ± 125 725, 43 480 ± 11 212, 1 046 371 ± 110 286, 601 679 ± 213 949, and 15 420 ± 9201 for Fe, Co, Ni, Cu, Zn, Cd, and Pb with respect to dissolved concentrations in coastal and offshore waters of the Bay of Bengal. © 2009 Wiley Periodicals, Inc. Environ Toxicol, 2009. Copyright © 2009 Wiley Periodicals, Inc.

[Salmon-pink colored conjunctival tumor with amyloid deposits].

PubMed

Müller, P L; Loeffler, K U; Holz, F G; Fischer, H-P; Herwig, M C

2016-07-01

An 82-year-old male patient presented with a salmon-pink colored conjunctival tumor of the left eye. A circumscribed, dense and whitish portion was detected by clinical examination. The histophological and immunhistochemical examination of the biopsy tissue revealed a CD20+ marginal zone lymphoma of the conjunctiva with amyloid deposits. Extranodal marginal zone lymphoma at this site is the most common lymphoma of the ocular adnexa and accounts for 5-10% of malignant diseases. An association with amyloid production is very rare and according to the current state of knowledge has no known impact on the outcome.

Reconstructing Sea Surface Conditions in the Bay of Bengal during the Mid-Pleistocene Transition

NASA Astrophysics Data System (ADS)

Lagos, A. D.; Dekens, P.; Reilly, B. T.; Selkin, P. A.; Meynadier, L.; Savian, J. F.

2017-12-01

During the Mid-Pleistocene Transition (MPT, 0.8-1.2Ma) Earth's glacial cycles transitioned from responding primarily to 41kyr obliquity cycles to responding to 100kyr eccentricity cycles. In the tropics, sea surface temperature (SST) in the eastern tropical Pacific cooled through the MPT, suggesting a strengthening of the equatorial Pacific zonal temperature gradient (Medina-Elizalde & Lea, 2005). The strong SST gradient would have intensified Walker Cell convection during the MPT and built up latent heat in the western Pacific, which could cause cold SST anomalies in the northern Indian Ocean (Liu et al., 2015). Due to a scarcity of records, it is unclear how climate and oceanic conditions evolved in the Indian Ocean during the MPT. A set of recent IODP expeditions, including 353 and 354, cored sediment from the Bay of Bengal. Several sites recovered by expedition 353 will be ideal for reconstructing monsoon intensity through time, while the expedition 354 cores from a longitudinal transect at 8°N are in a region not directly impacted by changes in freshwater input due to direct precipitation or run off. The sites are influenced by the northeastern migration of equatorial Indian Ocean water via the Southwest Monsoon Current, which supplies significant moisture to the monsoon. Expedition 354's southern Bay of Bengal sites are well situated for better understanding the link between the tropical Indian Ocean and the northern Bay of Bengal. We reconstructed sea surface conditions at IODP site 1452 (8°N, 87°E, 3670m water depth) in the distal Bengal Fan. A 3 meter long section of the core has been identified as the MPT using the Bruhnes/Matuyama, Jaramillo, and Cobb Mountain paleomagnetic reversals (France-Lanord et al., 2016). This section of site 1452 was sampled every 2cm ( 2kyr resolution). Approximately 30 G. sacculifer, a surface dwelling planktonic foraminifera, were picked from the 355-425μm size fraction. We measured Mg/Ca and δ18O on splits of the same

Phenolphthalein—Pink Tornado Demonstration

NASA Astrophysics Data System (ADS)

Prall, Bruce R.

2008-04-01

The phenolphthalein-pink tornado demonstration utilizes the vortex generated by a spinning magnetic stirring bar in a 1 L graduated cylinder containing 0.01 M HCl to demonstrate Le Châtelier's principle as it applies to the phenolphthalein equilibrium in water H 2 In + 2H 2 O 2H 2 O + + In 2 - where H 2 In is phenophthalein. The addition of 3-4 drops of phenolphthalein indicator solution followed immediately by 3-4 drops of 50% (w/w) NaOH to the vortex of the HCl solution results in a shift to the right in the equilibrium owing to the reaction of OH - + H 3 O + to form water. This shift is accompanied by the vortex becoming visible by the appearance of a pinkish-red color caused by an increase in In 2- concentration within the localized region of the vortex. The demonstration also provides one an excellent opportunity to discuss the topics of limiting reagent and reagent in excess. Some insight regarding the extent to which uniform mixing is achieved when using a magnetic stirrer is also provided. Included is a note from the Feature Editor, Ed Vitz.

A Plume Head and Tail in the Bengal Basin and Bay of Bengal: Rajmahal and Sylhet Traps with Surrounding Alkalic Volcanism and the Ninetyeast Ridge

NASA Astrophysics Data System (ADS)

Basu, A. R.; Weaver, K. L.; Sengupta, S.

2001-12-01

Although the 116-113 Ma-old Rajmahal-Sylhet Traps of the Bengal basin, potentially covering an area > 2x105 km2, can be directly linked via Ninetyeast Ridge to the Kerguelen Plume, more than 5,000 kms away, it is generally believed that this flood basalt volcanism originated from a normal MORB-type mantle at the boundary of a mantle plume. This model, primarily based on geochemical analysis of a limited number of Rajmahal basalts, requires initiation of rifting of the eastern Indian margin by a smaller thermal flux than necessary for creating a large igneous province. Here we show that the extent of volcanism associated with the Rajmahal-Sylhet Traps is far greater than usually assumed, thus requiring a direct involvement of the Kerguelen Plume. In addition to the surface exposures of the flood basalts in Rajmahal-Sylhet, the basaltic rocks have been encountered in many parts of the Bengal Basin in bore holes reaching a maximum thickness of 600 m in the western margin of the Basin (Sengupta, Bull. AAPG, 1966) Most importantly, several suites of ultrapotassic and alkalic intrusive complexes, similar to those associated with the Deccan and Siberia Traps, occur over wide areas within and outside the Basin: i) southwest of the surface exposures of Rajmahal basalts, distance 200km, intrusive in Lower Gondwana coalbeds, Ar-Ar age 114 Ma (P.R. Renne, personal communication), ii) 400 km north of Rajmahal, exposed in Sikkim, intrusive into metamorphic crystalline nappes of the Himalayas; distance here is not real and must be a minimum as the nappes have been transported from the north, iii) northeast of Rajmahal in Meghalaya State, distance 550 km, intrusive into metamorphic Precambrian basement rocks. Nd-Sr isotopic ratios and trace element characteristics of these above ultrapotassic and alkaline rocks are consistent with their origin associated with the Kerguelen Plume. The wide range in Nd-Sr array for these rocks, including the Sylhet and Rajmahal basalts, shows

The pink eye syndrome does not impair tuber fresh cut wound-related responses

USDA-ARS?s Scientific Manuscript database

The potato tuber pink eye (PE) syndrome is a costly physiological disorder that results in corruption of the native periderm, susceptibility to infection, water vapor loss and associated shrinkage, roughened and cracked tuber surfaces, and various related blemishes and defects. PE results in aberra...

A novel PGC-1α isoform in brain localizes to mitochondria and associates with PINK1 and VDAC

DOE Office of Scientific and Technical Information (OSTI.GOV)

Choi, Joungil, E-mail: jochoi@som.umaryland.edu; Veterans Affairs Medical Center, Baltimore, MD 21201; Batchu, Vera Venkatanaresh Kumar

2013-06-14

Highlights: •Novel 35 kDa PGC-1α localizes to mitochondrial inner membrane and matrix in brain. •Mitochondrial localization of 35 kDa PGC-1α depends on VDAC protein. •Mitochondrial localization of 35 kDa PGC-1α depends on membrane potential. •The 35 kDa PGC-1α associates and colocalizes with PINK in brain mitochondria. -- Abstract: Peroxisome proliferator-activated receptor-gamma co-activator 1α (PGC-1α) and PTEN-induced putative kinase 1 (PINK1) are powerful regulators of mitochondrial function. Here, we report that a previously unrecognized, novel 35 kDa PGC-1α isoform localizes to the mitochondrial inner membrane and matrix in brain as determined by protease protection and carbonate extraction assays, as well asmore » by immunoelectron microscopy. Immunoelectron microscopy and import experiments in vitro revealed that 35 kDa PGC-1α colocalizes and interacts with the voltage-dependent anion channel (VDAC), and that its import depends on VDAC. Valinomycin treatment which depolarizes the membrane potential, abolished mitochondrial localization of the 35 kDa PGC-1α. Using blue native-PAGE, co-immunoprecipitation, and immunoelectron microscopy analyses, we found that the 35 kDa PGC-1α binds and colocalizes with PINK1 in brain mitochondria. This is the first report regarding mitochondrial localization of a novel 35 kDa PGC-1α isoform and its association with PINK1, suggesting possible regulatory roles for mitochondrial function in the brain.« less

Climate change, pink salmon, and the nexus between bottom-up and top-down forcing in the subarctic Pacific Ocean and Bering Sea.

PubMed

Springer, Alan M; van Vliet, Gus B

2014-05-06

Climate change in the last century was associated with spectacular growth of many wild Pacific salmon stocks in the North Pacific Ocean and Bering Sea, apparently through bottom-up forcing linking meteorology to ocean physics, water temperature, and plankton production. One species in particular, pink salmon, became so numerous by the 1990s that they began to dominate other species of salmon for prey resources and to exert top-down control in the open ocean ecosystem. Information from long-term monitoring of seabirds in the Aleutian Islands and Bering Sea reveals that the sphere of influence of pink salmon is much larger than previously known. Seabirds, pink salmon, other species of salmon, and by extension other higher-order predators, are tightly linked ecologically and must be included in international management and conservation policies for sustaining all species that compete for common, finite resource pools. These data further emphasize that the unique 2-y cycle in abundance of pink salmon drives interannual shifts between two alternate states of a complex marine ecosystem.

Elicitation of spreading depression by rose bengal photodynamic action.

PubMed

Netto, M; Martins-Ferreira, H

1989-08-01

Spreading depression refers to a slowly propagating depression of the ordinary electrical activity of the nervous tissue. It can be elicited by different types of physical or chemical non-specific stimuli. Various evidences suggest that transient alterations of cell membranes are involved. For this reason, and considering the action of free radicals on cell membranes, the elicitation of the reaction by dye photoactivation has been investigated. Isolated chick retina superfused in the dark with Ringer solution was able to regularly exhibit spreading depression when submitted to 1 microM rose bengal pulse of 5 min in duration, followed by 2.1 x 10(4) to 4.2 x 10(4) Jm-2 light pulse. The phenomenon was monitored either by visual inspection of the light-scattering milky wave that accompanies the reaction or by recording its characteristic slow voltage variation. The reaction was not triggered if the retina, superfused with the dye, was (a) maintained in the dark; (b) illuminated with red light (3.75 x 10(2) to 2.25 x 10(4) Jm-2), or (c) stimulated by white light but superfused with nitrogen-saturated solutions. It is concluded that, under the present conditions, the elicitation of spreading depression is contingent on the photoactivation of rose bengal in the presence of oxygen.

Emergence of West Nile virus in West Bengal, India: a new report.

PubMed

Khatun, Tanuja; Chatterjee, Shyamalendu

2017-04-01

The ICMR virus unit in Kolkata functions as an Appex Referral Laboratory for the detection of dengue (DENV) and chikungunya (CHIKV) infections in the eastern part of India. In spite of efforts for confirmatory diagnosis, some samples remain undiagnosed every year. West Nile virus (WNV) infection may mimic either dengue (flavivirus) or chikungunya (alphavirus) like illness. WNV is endemic in the tropical region where its principal/potential vectors are Aedes and Culex. We explored the existence of WNV within undiagnosed samples to identify the emergence of a new public health problem. Of 1278 sera samples, 574 were negative for DENV and CHIKV either by ELISA or by reverse transcriptase (RT)-PCR. Of these 574 negative samples, 83 (14.5%) and 141 (24.56%) were positive for WNV by ELISA and RT-PCR, respectively; no samples were positive for WNV by both methods. After assembling raw sequencing data, partial envelope genome sequence of West Bengal isolates, WNV was compared through BLAST with other WNV Indian strains and 98% homology detected. Phylogenetic analysis of one West Bengal isolates (Accession No. KY421790) and 28 Indian isolates available in GenBank, indicated close clustering. The serological and molecular approaches have clearly established the emergence of WNV in West Bengal. Hence, for proper case management, detection of WNV in common febrile illness is strongly recommended. © The Author 2017. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

PINK1/Parkin-mediated mitophagy play a protective role in manganese induced apoptosis in SH-SY5Y cells.

PubMed

Zhang, Hong-Tao; Mi, Lan; Wang, Ting; Yuan, Lan; Li, Xue-Hui; Dong, Li-Sha; Zhao, Peng; Fu, Juan-Ling; Yao, Bi-Yun; Zhou, Zong-Can

2016-08-01

Manganese (Mn) as an environmental risk factor of Parkinson's disease (PD) is considered to cause manganism. Mitophagy is thought to play a key role in elimination the injured mitochondria. The goal of this paper was to explore whether the PINK1/Parkin-mediated mitophagy is activated and its role in Mn-induced mitochondrial dysfunction and cell death in SH-SY5Y cells. Here, we investigated effects of MnCl2 on ROS generation, mitochondrial membrane potential (MMP/ΔΨm) and apoptosis by FACS and examined PINK1/Parkin-mediated mitophagy by western-blotting and the co-localization of mitochondria and acidic lysosomes. Further, we explore the role of mitophagy in Mn-induced apoptosis by inhibition the mitophagy by knockdown Parkin level. Results show that MnCl2 dose-dependently caused ΔΨm decrease, ROS generation and apoptosis of dopaminergic SH-SY5Y cells. Moreover, Mn could induce mitophagy and PINK1/Parkin-mediated pathway was activated in SH-SY5Y cells. Transient transfection of Parkin siRNA knockdown the expressing level of parkin inhibited Mn-induced mitophagy and aggravated apoptosis of SH-SY5Y cells. In conclusion, our study demonstrated that Mn may induce PINK1/Parkin-mediated mitophagy, which may exert significant neuro-protective effect against Mn-induced dopaminergic neuronal cells apoptosis. Copyright © 2016 Elsevier B.V. All rights reserved.

An assessment of oil spill effects on pink salmon populations following the Exxon Valdez oil spill. Part 1: Early life history

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brannon, E.L.; Moulton, L.L.; Gilbertson, L.G.

1995-12-31

This paper discusses results of field programs initiated within a few days of the spill and designed to assess spill effects on critical early life stages of pink salmon in postspill years. Samples of water and stream sediments from throughout the spill area were used to define the exposure of pink salmon to residual hydrocarbons from the spill. Mean sediment concentrations of polycyclic aromatic hydrocarbons (PAH) up to 300 ppb were measured in oiled streams in 1989 and generally followed a downward trend toward background in 1990 and 1991. These PAH concentrations were then used in regression analyses of potentialmore » effects on key early life stages of pink salmon. Water samples taken from both nearshore feeding and rearing areas and offshore migratory areas show that hydrocarbon concentrations were from one to four orders of magnitude lower than concentrations reported in the literature to cause acute or chronic effects on fish species. The postspill field and laboratory studies of pink salmon early life stages included examination of potential effects on 1989, 1990, and 1991 eggs, fry, and juveniles. 28 refs., 8 figs., 8 tabs.« less

Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh

PubMed Central

Wilbanks, Elizabeth G; Jaekel, Ulrike; Salman, Verena; Humphrey, Parris T; Eisen, Jonathan A; Facciotti, Marc T; Buckley, Daniel H; Zinder, Stephen H; Druschel, Gregory K; Fike, David A; Orphan, Victoria J

2014-01-01

Microbial metabolism is the engine that drives global biogeochemical cycles, yet many key transformations are carried out by microbial consortia over short spatiotemporal scales that elude detection by traditional analytical approaches. We investigate syntrophic sulfur cycling in the ‘pink berry’ consortia of the Sippewissett Salt Marsh through an integrative study at the microbial scale. The pink berries are macroscopic, photosynthetic microbial aggregates composed primarily of two closely associated species: sulfide-oxidizing purple sulfur bacteria (PB-PSB1) and sulfate-reducing bacteria (PB-SRB1). Using metagenomic sequencing and 34S-enriched sulfate stable isotope probing coupled with nanoSIMS, we demonstrate interspecies transfer of reduced sulfur metabolites from PB-SRB1 to PB-PSB1. The pink berries catalyse net sulfide oxidation and maintain internal sulfide concentrations of 0–500 μm. Sulfide within the berries, captured on silver wires and analysed using secondary ion mass spectrometer, increased in abundance towards the berry interior, while δ34S-sulfide decreased from 6‰ to −31‰ from the exterior to interior of the berry. These values correspond to sulfate–sulfide isotopic fractionations (15–53‰) consistent with either sulfate reduction or a mixture of reductive and oxidative metabolisms. Together this combined metagenomic and high-resolution isotopic analysis demonstrates active sulfur cycling at the microscale within well-structured macroscopic consortia consisting of sulfide-oxidizing anoxygenic phototrophs and sulfate-reducing bacteria. PMID:24428801

Influence of El Niño and Indian Ocean Dipole on sea level variability in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Sreenivas, P.; Gnanaseelan, C.; Prasad, K. V. S. R.

2012-01-01

Zonally oscillating seasonal equatorial winds generate pairs of upwelling and downwelling Kelvin waves in the Equatorial Indian Ocean, which then advance in to the coastal Bay of Bengal. The first (second) equatorial upwelling Kelvin wave has its origin in the western (eastern) basin, whereas the downwelling Kelvin waves originate in the central basin. The observed interannual variability of these Kelvin waves is highly governed by the associated zonal wind changes in the central and eastern equatorial Indian Ocean during the anomalous years. The second downwelling (upwelling) Kelvin wave is absent (weak) during El Niño (La Niña) years, whereas the second upwelling Kelvin wave strengthened during El Niño years both in the equatorial Indian Ocean and Bay of Bengal. The large scale off equatorial Rossby waves occasionally feedback the equatorial Kelvin waves, which then strengthen the Bay of Bengal coastal Kelvin waves. The coastal Kelvin waves and the associated radiated Rossby waves from east play a dominant role in the mesoscale eddy generation in Bay of Bengal. The analysis of cyclogenesis characteristics in the bay over the past 65 years revealed that the active (suppressed) phases of cyclogenesis are coinciding with the downwelling (upwelling) planetary waves which influence the cyclone heat potential by altering the thermocline depth.

Evaluation of remote sensing in control of pink bollworm in cotton

NASA Technical Reports Server (NTRS)

Coleman, V. B.; Johnson, C. W.; Lewis, L. N.

1973-01-01

The use of satellite data from the ERTS-1 satellite for mapping the cotton acreage in the southern deserts of California is discussed. The differences between a growing, a defoliated, and a plowed down field can be identified using an optical color combiner. The specific application of the land use maps is to control the spread of the pink bollworms by establishing planting and plowdown dates.

Composition of the essential oil of pink chablis bluebeard (Caryopteris x clandonensis 'Durio') and its biological activity against the yellow fever mosquito Aedes aegypti

USDA-ARS?s Scientific Manuscript database

Caryopteris ×clandonensis A. Simmonds ex C. H. Curtis 'Durio' Pink Chablis™, (Lamiaceae) a pink-flowered cultivar distinctive among the typically blue-flowered cultivars of bluebeard, is valued as a small, deciduous shrub in the landscape for its mounded growth habit, showy flower display in summer,...

Isolation and Partial Characterization of the Pink and Blue Pigments of Pocilloporid and Acroporid Corals.

PubMed

Dove, S G; Takabayashi, M; Hoegh-Guldberg, O

1995-12-01

The compounds responsible for the pink and blue colors of two families of hermatypic corals (Pocilloporidae, Acroporidae) from the southern Great Barrier Reef were isolated and biochemically characterized. Isolation of the pink pigment from Pocillopora damicornis (named pocilloporin, {lambda}max = 560 nm, 390 nm) revealed that it was a hydrophilic protein dimer with a native molecular weight of approximately 54 kD and subunits of 28 kD. The subunits are not linked by disulfide bonds. Attempts to dissociate the chromophore from the protein proved unsuccessful. Denaturing the protein with heat (60{deg}C) or 5% sodium dodecyl sulfate (SDS) removed the 560-nm absorbance peak without introducing a detectable bathochromic shift. In acetone, ethanol, ether, and chloroform, the pigment precipitates out of solution, leaving a colorless supernatant. These properties suggest that the protein and chromophore are covalently linked. Ion analysis revealed that the pigment does not have metal ions chelated to it. Coral pigments were also isolated from pink morphs of other pocilloporids, Seriatopora hystrix ({lambda}max = 560 nm) and Stylophora pistillata ({lambda}max = 560 nm); and from bluish regions of the acroporids, Acropora formosa (blue; {lambda}max = 590 nm) and Acropora digitifera (purple; {lambda}max = 580 nm). With the exception of A. formosa, all the corals examined had pigments with the same native (54 kD) and subunit (28 kD) molecular weights as those of P. damicornis. A. formosa pigment has a native molecular weight of about 82.6 kD and three subunits of 28 kD. The pigments isolated from each of these coral species have properties similar to those described for P. damicornis. Isolation and biochemical purification of the pigment enabled the exploration of the function of the pink pigment. Three possibilities were eliminated. The compound does not act as (i) a photoprotectant for shielding the photosynthetic pigments of symbiotic zooxanthellae against excessive

Enhancement of high glucose-induced PINK1 expression by melatonin stimulates neuronal cell survival: Involvement of MT2 /Akt/NF-κB pathway.

PubMed

Onphachanh, Xaykham; Lee, Hyun Jik; Lim, Jae Ryong; Jung, Young Hyun; Kim, Jun Sung; Chae, Chang Woo; Lee, Sei-Jung; Gabr, Amr Ahmed; Han, Ho Jae

2017-09-01

Hyperglycemia is a representative hallmark and risk factor for diabetes mellitus (DM) and is closely linked to DM-associated neuronal cell death. Previous investigators reported on a genome-wide association study and showed relationships between DM and melatonin receptor (MT), highlighting the role of MT signaling by assessing melatonin in DM. However, the role of MT signaling in DM pathogenesis is unclear. Therefore, we investigated the role of mitophagy regulators in high glucose-induced neuronal cell death and the effect of melatonin against high glucose-induced mitophagy regulators in neuronal cells. In our results, high glucose significantly increased PTEN-induced putative kinase 1 (PINK1) and LC-3B expressions; as well it decreased cytochrome c oxidase subunit 4 expression and Mitotracker™ fluorescence intensity. Silencing of PINK1 induced mitochondrial reactive oxygen species (ROS) accumulation and mitochondrial membrane potential impairment, increased expressions of cleaved caspases, and increased the number of annexin V-positive cells. In addition, high glucose-stimulated melatonin receptor 1B (MTNR1B) mRNA and PINK1 expressions were reversed by ROS scavenger N-acetyl cysteine pretreatment. Upregulation of PINK1 expression in neuronal cells is suppressed by pretreatment with MT 2 receptor-specific inhibitor 4-P-PDOT. We further showed melatonin stimulated Akt phosphorylation, which was followed by nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) phosphorylation and nuclear translocation. Silencing of PINK1 expression abolished melatonin-regulated mitochondrial ROS production, cleaved caspase-3 and caspase-9 expressions, and the number of annexin V-positive cells. In conclusion, we have demonstrated the melatonin stimulates PINK1 expression via an MT 2 /Akt/NF-κB pathway, and such stimulation is important for the prevention of neuronal cell apoptosis under high glucose conditions. © 2017 The Authors. Journal of Pineal Research

Phosphorylation by PINK1 Releases the UBL Domain and Initializes the Conformational Opening of the E3 Ubiquitin Ligase Parkin

PubMed Central

Moussaud-Lamodière, Elisabeth L.; Dourado, Daniel F. A. R.; Flores, Samuel C.; Springer, Wolfdieter

2014-01-01

Loss-of-function mutations in PINK1 or PARKIN are the most common causes of autosomal recessive Parkinson's disease. Both gene products, the Ser/Thr kinase PINK1 and the E3 Ubiquitin ligase Parkin, functionally cooperate in a mitochondrial quality control pathway. Upon stress, PINK1 activates Parkin and enables its translocation to and ubiquitination of damaged mitochondria to facilitate their clearance from the cell. Though PINK1-dependent phosphorylation of Ser65 is an important initial step, the molecular mechanisms underlying the activation of Parkin's enzymatic functions remain unclear. Using molecular modeling, we generated a complete structural model of human Parkin at all atom resolution. At steady state, the Ub ligase is maintained inactive in a closed, auto-inhibited conformation that results from intra-molecular interactions. Evidently, Parkin has to undergo major structural rearrangements in order to unleash its catalytic activity. As a spark, we have modeled PINK1-dependent Ser65 phosphorylation in silico and provide the first molecular dynamics simulation of Parkin conformations along a sequential unfolding pathway that could release its intertwined domains and enable its catalytic activity. We combined free (unbiased) molecular dynamics simulation, Monte Carlo algorithms, and minimal-biasing methods with cell-based high content imaging and biochemical assays. Phosphorylation of Ser65 results in widening of a newly defined cleft and dissociation of the regulatory N-terminal UBL domain. This motion propagates through further opening conformations that allow binding of an Ub-loaded E2 co-enzyme. Subsequent spatial reorientation of the catalytic centers of both enzymes might facilitate the transfer of the Ub moiety to charge Parkin. Our structure-function study provides the basis to elucidate regulatory mechanisms and activity of the neuroprotective Parkin. This may open up new avenues for the development of small molecule Parkin activators through

Hydrogeochemical contrast between brown and grey sand aquifers in shallow depth of Bengal Basin: consequences for sustainable drinking water supply.

PubMed

Biswas, Ashis; Nath, Bibhash; Bhattacharya, Prosun; Halder, Dipti; Kundu, Amit K; Mandal, Ujjal; Mukherjee, Abhijit; Chatterjee, Debashis; Mörth, Carl-Magnus; Jacks, Gunnar

2012-08-01

Delineation of safe aquifer(s) that can be targeted by cheap drilling technology for tubewell (TW) installation becomes highly imperative to ensure access to safe and sustainable drinking water sources for the arsenic (As) affected population in Bengal Basin. This study investigates the potentiality of brown sand aquifers (BSA) as a safe drinking water source by characterizing its hydrogeochemical contrast to grey sand aquifers (GSA) within shallow depth (<70 m) over an area of 100 km(2) in Chakdaha Block of Nadia district, West Bengal, India. The results indicate that despite close similarity in major ion composition, the redox condition is markedly different in groundwater of the two studied aquifers. The redox condition in the BSA is delineated to be Mn oxy-hydroxide reducing, not sufficiently lowered for As mobilization into groundwater. In contrast, the enrichments of NH(4)(+), PO(4)(3-), Fe and As along with lower Eh in groundwater of GSA reflect reductive dissolution of Fe oxy-hydroxide coupled to microbially mediated oxidation of organic matter as the prevailing redox process causing As mobilization into groundwater of this aquifer type. In some portions of GSA the redox status even has reached to the stage of SO(4)(2-) reduction, which to some extent might sequester dissolved As from groundwater by co-precipitation with authigenic pyrite. Despite having low concentration of As in groundwater of the BSA the concentration of Mn often exceeds the drinking water guidelines, which warrants rigorous assessment of attendant health risk for Mn prior to considering mass scale exploitation of the BSA for possible sustainable drinking water supply. Copyright © 2012 Elsevier B.V. All rights reserved.

The Sex Education Debates: Teaching "Life Style" in West Bengal, India

ERIC Educational Resources Information Center

Chakravarti, Paromita

2011-01-01

This paper examines the recent controversies surrounding the decision to introduce sex education in secondary schools in India to combat the rapid spread of HIV and AIDS in the country. While 11 Indian states have banned it, the Left-ruled state of West Bengal has designed a teachers' manual to impart sex education. However, a close analysis of…

Isolation of an arsenate-respiring bacterium from a redox front in an arsenic-polluted aquifer in West Bengal, Bengal Basin.

PubMed

Osborne, Thomas H; McArthur, John M; Sikdar, Pradip K; Santini, Joanne M

2015-04-07

Natural pollution of groundwater by arsenic adversely affects the health of tens of millions of people worldwide, with the deltaic aquifers of SE Asia being particularly polluted. The pollution is caused primarily by, or as a side reaction of, the microbial reduction of sedimentary Fe(III)-oxyhydroxides, but the organism(s) responsible for As release have not been isolated. Here we report the first isolation of a dissimilatory arsenate reducer from sediments of the Bengal Basin in West Bengal. The bacterium, here designated WB3, respires soluble arsenate and couples its reduction to the oxidation of acetate; WB3 is therefore implicated in the process of arsenic pollution of groundwater, which is largely by arsenite. The bacterium WB3 is also capable of reducing dissolved Fe(III) citrate, solid Fe(III)-oxyhydroxide, and elemental sulfur, using acetate as the electron donor. It is a member of the Desulfuromonas genus and possesses a dissimilatory arsenate reductase that was identified using degenerate polymerase chain reaction primers. The sediment from which WB3 was isolated was brown, Pleistocene sand at a depth of 35.2 m below ground level (mbgl). This level was some 3 cm below the boundary between the brown sands and overlying reduced, gray, Holocene aquifer sands. The color boundary is interpreted to be a reduction front that releases As for resorption downflow, yielding a high load of labile As sorbed to the sediment at a depth of 35.8 mbgl and concentrations of As in groundwater that reach >1000 μg/L.

Early marine growth of pink salmon in Prince William Sound and the coastal gulf of Alaska during years of low and high survival

USGS Publications Warehouse

Cross, A.D.; Beauchamp, D.A.; Myers, K.W.; Moss, J.H.

2008-01-01

Although early marine growth has repeatedly been correlated with overall survival in Pacific salmon Oncorhynchus spp., we currently lack a mechanistic understanding of smolt-to-adult survival. Smolt-to-adult survival of pink salmon O. gorbuscha returning to Prince William Sound was lower than average for juveniles that entered marine waters in 2001 and 2003 (3% in both years), and high for those that entered the ocean in 2002 (9%) and 2004 (8%). We used circulus patterns from scales to determine how the early marine growth of juvenile pink salmon differed (1) seasonally during May-October, the period hypothesized to be critical for survival; (2) between years of low and high survival; and (3) between hatchery and wild fish. Juvenile pink salmon exhibited larger average size, migrated onto the continental shelf and out of the sampling area more quickly, and survived better during 2002 and 2004 than during 2001 and 2003. Pink salmon were consistently larger throughout the summer and early fall during 2002 and 2004 than during 2001 and 2003, indicating that larger, faster-growing juveniles experienced higher survival. Wild juvenile pink salmon were larger than hatchery fish during low-survival years, but no difference was observed during high-survival years. Differences in size among years were determined by some combination of growing conditions and early mortality, the strength of which could vary significantly among years. ?? Copyright by the American Fisheries Society 2008.

PINK1/Parkin-Dependent Mitochondrial Surveillance: From Pleiotropy to Parkinson's Disease

PubMed Central

Mouton-Liger, Francois; Jacoupy, Maxime; Corvol, Jean-Christophe; Corti, Olga

2017-01-01

Parkinson's disease (PD) is one of the most frequent neurodegenerative disease caused by the preferential, progressive degeneration of the dopaminergic (DA) neurons of the substantia nigra (SN) pars compacta. PD is characterized by a multifaceted pathological process involving protein misfolding, mitochondrial dysfunction, neuroinflammation and metabolism deregulation. The molecular mechanisms governing the complex interplay between the different facets of this process are still unknown. PARK2/Parkin and PARK6/PINK1, two genes responsible for familial forms of PD, act as a ubiquitous core signaling pathway, coupling mitochondrial stress to mitochondrial surveillance, by regulating mitochondrial dynamics, the removal of damaged mitochondrial components by mitochondria-derived vesicles, mitophagy, and mitochondrial biogenesis. Over the last decade, PINK1/Parkin-dependent mitochondrial quality control emerged as a pleiotropic regulatory pathway. Loss of its function impinges on a number of physiological processes suspected to contribute to PD pathogenesis. Its role in the regulation of innate immunity and inflammatory processes stands out, providing compelling support to the contribution of non-cell-autonomous immune mechanisms in PD. In this review, we illustrate the central role of this multifunctional pathway at the crossroads between mitochondrial stress, neuroinflammation and metabolism. We discuss how its dysfunction may contribute to PD pathogenesis and pinpoint major unresolved questions in the field. PMID:28507507

On the dynamics of the Sri Lanka Dome in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Burns, Jessica M.; Subrahmanyam, Bulusu; Murty, V. S. N.

2017-09-01

East of Sri Lanka, in the northern Indian Ocean, a cold dome, known as the Sri Lanka Dome (SLD), develops during southwest monsoon season (June-September). The SLD first forms around May, matures in July, and decays around September, in association with the strong cyclonic wind stress curl. In this study, the structure and dynamics of SLD in response to the climatic events such as the Indian Ocean Dipole (IOD) are examined. Our results reveal that these climatic events modulated the subsurface temperature variability in the thermocline at ˜100 m depth, whose signature was also evident in the satellite-derived sea surface height (SSH) anomaly in the SLD region. We find that the mechanisms for the formation of SLD are consistent with previous research, and there is year-to-year variability in the SLD dynamics. This study also reveals that the atmospheric parameters including vertical wind shear and midtropospheric relative humidity are high over the SLD region and adjacent southern Bay of Bengal and show an upward (increasing) trend over the decades. This has impacted the atmospheric parameters over the northern Bay of Bengal over the decades and as a consequence the total number of monsoon depressions (June-September) decreased over the decades from 1980 to 2015, as reported by the India Meteorological Department, New Delhi. Thus, the new insight emerged from this study is the variability in the cyclogenesis and the occurrence of total number of monsoon depressions over northern Bay of Bengal over the decades is much related to the SLD dynamics.

A pink mouse reports the switch from red to green fluorescence upon Cre-mediated recombination.

PubMed

Hartwich, Heiner; Satheesh, Somisetty V; Nothwang, Hans Gerd

2012-06-14

Targeted genetic modification in the mouse becomes increasingly important in biomedical and basic science. This goal is most often achieved by use of the Cre/loxP system and numerous Cre-driver mouse lines are currently generated. Their initial characterization requires reporter mouse lines to study the in vivo spatiotemporal activity of Cre. Here, we report a dual fluorescence reporter mouse line, which switches expression from the red fluorescent protein mCherry to eGFP after Cre-mediated recombination. Both fluorescent proteins are expressed from the ubiquitously active and strong CAGGS promoter. Among the founders, we noticed a pink mouse line, expressing high levels of the red fluorescent protein mCherry throughout the entire body. Presence of mCherry in the living animal as well as in almost all organs was clearly visible without optical equipment. Upon Cre-activity, mCherry expression was switched to eGFP, demonstrating functionality of this reporter mouse line. The pink mouse presented here is an attractive novel reporter line for fluorescence-based monitoring of Cre-activity. The high expression of mCherry, which is visible to the naked eye, facilitates breeding and crossing, as no genotyping is required to identify mice carrying the reporter allele. The presence of two fluorescent proteins allows in vivo monitoring of recombined and non-recombined cells. Finally, the pink mouse is an eye-catching animal model to demonstrate the power of transgenic techniques in teaching courses.

Efficacy of pink guava pulp as an antioxidant in raw pork emulsion.

PubMed

Joseph, Serlene; Chatli, Manish K; Biswas, Ashim K; Sahoo, Jhari

2014-08-01

Lipid oxidation-induced quality problems can be minimized with the use of natural antioxidants. The antioxidant potential of pink guava pulp (PGP) was evaluated at different levels (0%; C, 5.0%; T-1, 7.5%; T-2 and 10.0%; T-3) in the raw pork emulsion during refrigerated storage of 9 days under aerobic packaging. Lycopene and β-carotene contents increased (P < 0.05) with PGP levels. The redness (a*) increased (P < 0.05), whereas L*decreased (P < 0.05) with the incorporation of PGP. The visual colour and odour scores were greater (P < 0.05) in PGP-treated products than control. Percent metmyoglobin formation was greater (P < 0.05) in the control than PGP-treated products, and increased (P < 0.05) during storage in all the treatments. Overall, peroxide value, thiobarbituric acid reactive substances and free fatty acid values were lower (P < 0.05) in PGP-treated raw emulsion than control throughout storage period. Our results indicated that pink guava pulp can be utilized as antioxidants in raw pork products to minimize lipid oxidation, off-odour development, and surface discolouration.

Mixing to Monsoons: Air-Sea Interactions in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Lucas, A. J.; Shroyer, E. L.; Wijesekera, H. W.; Fernando, H. J. S.; D'Asaro, E.; Ravichandran, M.; Jinadasa, S. U. P.; MacKinnon, J. A.; Nash, J. D.; Sharma, R.; Centurioni, L.; Farrar, J. T.; Weller, R.; Pinkel, R.; Mahadevan, A.; Sengupta, D.; Tandon, A.

2014-07-01

More than 1 billion people depend on rainfall from the South Asian monsoon for their livelihoods. Summertime monsoonal precipitation is highly variable on intraseasonal time scales, with alternating "active" and "break" periods. These intraseasonal oscillations in large-scale atmospheric convection and winds are closely tied to 1°C-2°C variations of sea surface temperature in the Bay of Bengal.

Pink Tea to Proactive: CCET's Transition Years, 1961-1982, as I Remember Them

ERIC Educational Resources Information Center

Thompson, Alvin H.

2015-01-01

Alvin Thompson, former president of the California Council on the Education of Teachers (CCET), describes how he became involved with the CCET, and how the cultural environment of the CCET shifted from a "Pink Tea" society to one of political action focused on the real needs of the schools for which teachers are prepared. Thompson…

Exceptional aerobic scope and cardiovascular performance of pink salmon (Oncorhynchus gorbuscha) may underlie resilience in a warming climate.

PubMed

Clark, Timothy D; Jeffries, Kenneth M; Hinch, Scott G; Farrell, Anthony P

2011-09-15

Little is known of the physiological mechanisms underlying the effects of climate change on animals, yet it is clear that some species appear more resilient than others. As pink salmon (Oncorhynchus gorbuscha) in British Columbia, Canada, have flourished in the current era of climate warming in contrast to other Pacific salmonids in the same watershed, this study investigated whether the continuing success of pink salmon may be linked with exceptional cardiorespiratory adaptations and thermal tolerance of adult fish during their spawning migration. Sex-specific differences existed in minimum and maximum oxygen consumption rates (M(O2,min) and M(O2,max), respectively) across the temperature range of 8 to 28°C, reflected in a higher aerobic scope (M(O2,max)-M(O2,min)) for males. Nevertheless, the aerobic scope of both sexes was optimal at 21°C (T(opt)) and was elevated across the entire temperature range in comparison with other Pacific salmonids. As T(opt) for aerobic scope of this pink salmon population is higher than in other Pacific salmonids, and historic river temperature data reveal that this population rarely encounters temperatures exceeding T(opt), these findings offer a physiological explanation for the continuing success of this species throughout the current climate-warming period. Despite this, declining cardiac output was evident above 17°C, and maximum attainable swimming speed was impaired above ∼23°C, suggesting negative implications under prolonged thermal exposure. While forecasted summer river temperatures over the next century are likely to negatively impact all Pacific salmonids, we suggest that the cardiorespiratory capacity of pink salmon may confer a selective advantage over other species.

Changes in pigment, spectral transmission and element content of pink chicken eggshells with different pigment intensity during incubation.

PubMed

Yu, Yue; Li, Zhanming; Pan, Jinming

2016-01-01

Objective. The objective of this study was to investigate changes in pigment, spectral transmission and element content of chicken eggshells with different intensities of pink pigment during the incubation period. We also investigated the effects of the region (small pole, equator and large pole) and pink pigment intensity of the chicken eggshell on the percent transmission of light passing through the chicken eggshells. Method. Eggs of comparable weight from a meat-type breeder (Meihuang) were used, and divided based on three levels of pink pigment (light, medium and dark) in the eggshells. During the incubation (0-21 d), the values of the eggshell pigment (ΔE, L (∗), a (∗), b (∗)) were measured. The percent transmission of light for different regions and intensities of eggshell pigmentation was measured by using the visible wavelength range of 380-780 nm. Result. Three measured indicators of eggshell color, ΔE, L (∗) and a (∗), did not change significantly during incubation. Compared with other regions and pigment intensities, eggshell at the small pole and with light pigmentation intensity showed the highest percent transmission of light. The transmission value varied significantly (P < 0.001) with incubation time. The element analysis of eggshells with different levels of pink pigment showed that the potassium content of the eggshells for all pigment levels decreased significantly during incubation. Conclusion. In summary, pigment intensity and the region of the eggshell influenced the percent transmission of light of eggshell. Differences in the spectral characteristics of different eggshells may influence the effects of photostimulation during the incubation of eggs. All of these results will be applicable for perfecting the design of light intensity for lighted incubation to improve productivity.

Changes in pigment, spectral transmission and element content of pink chicken eggshells with different pigment intensity during incubation

PubMed Central

Yu, Yue; Li, Zhanming

2016-01-01

Objective. The objective of this study was to investigate changes in pigment, spectral transmission and element content of chicken eggshells with different intensities of pink pigment during the incubation period. We also investigated the effects of the region (small pole, equator and large pole) and pink pigment intensity of the chicken eggshell on the percent transmission of light passing through the chicken eggshells. Method. Eggs of comparable weight from a meat-type breeder (Meihuang) were used, and divided based on three levels of pink pigment (light, medium and dark) in the eggshells. During the incubation (0–21 d), the values of the eggshell pigment (ΔE, L∗, a∗, b∗) were measured. The percent transmission of light for different regions and intensities of eggshell pigmentation was measured by using the visible wavelength range of 380–780 nm. Result. Three measured indicators of eggshell color, ΔE, L∗ and a∗, did not change significantly during incubation. Compared with other regions and pigment intensities, eggshell at the small pole and with light pigmentation intensity showed the highest percent transmission of light. The transmission value varied significantly (P < 0.001) with incubation time. The element analysis of eggshells with different levels of pink pigment showed that the potassium content of the eggshells for all pigment levels decreased significantly during incubation. Conclusion. In summary, pigment intensity and the region of the eggshell influenced the percent transmission of light of eggshell. Differences in the spectral characteristics of different eggshells may influence the effects of photostimulation during the incubation of eggs. All of these results will be applicable for perfecting the design of light intensity for lighted incubation to improve productivity. PMID:27019785

Improvement of age estimation using amino acid racemization in a case of pink teeth.

PubMed

Ohtani, S; Yamada, Y; Yamamoto, I

1998-03-01

Age was estimated from pink teeth using racemization of dentinal aspartic acid. Materials for identification were two lower second premolars. The body was determined to be that of a 40-year-old man; however, the age of the decedent had been estimated to be 29 and 30 years by the conventional method and 30 years from findings in the oral cavity. To clarify the cause of this difference, the powdered teeth were further washed in 0.01 mol/L hydrochloric acid. The racemization ratio (D/L ratio) of ordinary white teeth from persons of known age was slightly lower than that before washing, whereas that of the teeth used for identification was higher than before washing. The calculated age of the decedent using the racemization ratio of his teeth was between 36 and 37 years. These results suggest that age estimated from pink teeth is probably underestimated, but a more accurate age estimate can be obtained after adequate washing.

Tetralogy of Fallot and atrial septal defect in a white Bengal Tiger cub (Panthera tigris tigris)

PubMed Central

2014-01-01

A 3-week-old female white Bengal Tiger cub (Panthera tigris tigris) presented with acute onset tachypnoea, cyanosis and hypothermia. The cub was severely hypoxaemic with a mixed acid–base disturbance. Echocardiography revealed severe pulmonic stenosis, right ventricular hypertrophy, high membranous ventricular septal defect and an overriding aorta. Additionally, an atrial septal defect was found on necropsy, resulting in the final diagnosis of Tetralogy of Fallot with an atrial septal defect (a subclass of Pentalogy of Fallot). This report is the first to encompass arterial blood gas analysis, thoracic radiographs, echocardiography and necropsy findings in a white Bengal Tiger cub diagnosed with Tetralogy of Fallot with an atrial septal defect. PMID:24594084

200,000 years of monsoonal history recorded on the lower Bengal Fan - strong response to insolation forcing

NASA Astrophysics Data System (ADS)

Weber, Michael E.; Lantzsch, Hendrik; Dekens, Petra; Das, Supriyo K.; Reilly, Brendan T.; Martos, Yasmina M.; Meyer-Jacob, Carsten; Agrahari, Sandip; Ekblad, Alf; Titschack, Jürgen; Holmes, Beth; Wolfgramm, Philipp

2018-07-01

We conducted a multidisciplinary study to provide the stratigraphic and palaeoclimatic context of monsoonal rainfall dynamics and their responses to orbital forcing for the Bay of Bengal. Using sediment lightness we established an age model at orbital resolution for International Ocean Discovery Programme (IODP) Core U1452C-1H that covers the last 200 ka in the lower Bengal Fan. The low-resolution δ18O of G. sacculifer is consistent with global δ18O records, at least for major glacial-to-interglacial transitions. The variability of total organic carbon, total nitrogen, and the δ13C composition of organic matter indicate the marine origin of organic matter. Marine primary productivity likely increased during insolation minima, indicative for an enhanced NE monsoon during glacials and stadials. Pristine insolation forcing is also documented for wet-bulk density, red-green color variability, and grain-size variations, indicating that darker and coarser-grained material deposited at higher sedimentation rates during insolation minima. Stronger NE monsoon likely amplified ocean-atmosphere interactions over the Indian Ocean, leading to stronger upwelling through shoaling the thermocline, and higher delivery of sediment to the Bay of Bengal due to higher soil erosion on land. In addition, lower glacial and stadial sea levels as well as stronger westward surface circulation favored delivery of coarser-grained fluvial material to the lower Bengal Fan. At the same time the stronger NE monsoon might have increased the aeolian supply. Total inorganic carbon, the Ca/Ti ratio, and biogenic silica vary dominantly on obliquity frequencies, suggesting mobilization and transport of lithogenic material primarily during lowered sea levels and/or higher influence of the Northern Hemisphere westerlies on the dust transport from the Tibetan Plateau. The close resemblance of sediment lightness and the climate record of Antarctic ice cores over multiple glacial cycles indicate close

Political ecology of groundwater: the contrasting case of water-abundant West Bengal and water-scarce Gujarat, India

NASA Astrophysics Data System (ADS)

Mukherji, Aditi

2006-03-01

Three apparently disparate themes (groundwater, farmers and politics) interweave in this account of how groundwater-related policies in India have very little to do with the scarcity, depletion or quality of groundwater, and more to do with rural politics manifested, among other things, in terms of the presence or absence of farmer lobbies. Examples from two states of India, the water-abundant state of West Bengal and water-scarce state of Gujarat, were investigated using readily available data, analysis of the literature, interviews and fieldwork. In the case of West Bengal, although there is no pressing groundwater crisis, the government of West Bengal (GOWB) was able to successfully implement strict groundwater regulations along with a drastic increase in electricity tariff. More importantly, GOWB was able to implement these without any form of visible farmer protest, though these measures negatively affected farmer incomes. On the other hand, in Gujarat, where there is a real and grave groundwater crisis, the government of Gujarat has neither been able to implement strict groundwater regulations, nor has it been able to increase electricity tariff substantially. Thus, through the lens of ‘political ecology’ the contrasting case of these two Indian states is explained.

Ecological controls on the shell geochemistry of pink and white Globigerinoides ruber in the northern Gulf of Mexico: implications for paleoceanographic reconstruction

USGS Publications Warehouse

Richey, Julie N.; Poore, Richard Z.; Flower, Benjamin P.; Hollander, David J.

2012-01-01

We evaluate the relationship between foraminiferal test size and shell geochemistry (δ13C, δ18O, and Mg/Ca) for two of the most commonly used planktonic foraminifers for paleoceanographic reconstruction in the subtropical Atlantic Ocean: the pink and white varieties of Globigerinoides ruber. Geochemical analyses were performed on foraminifera from modern core-top samples of high-accumulation rate basins in the northern Gulf of Mexico. Mg/Ca analysis indicates a positive relationship with test size, increasing by 1.1 mmol/mol (~ 2.5 °C) from the smallest (150–212 μm) to largest (> 500 μm) size fractions of G. ruber (pink), but with no significant relationship in G. ruber (white). In comparison, oxygen isotope data indicate a negative relationship with test size, decreasing by 0.6‰ across the size range of both pink and white G. ruber. The observed increase in Mg/Ca and decrease in δ18O are consistent with an increase in calcification temperature of 0.7 °C per 100 μm increase in test size, suggesting differences in the seasonal and/or depth distribution among size fractions. Overall, these results stress the necessity for using a consistent size fraction in downcore paleoceanographic studies. In addition, we compare downcore records of δ18O and Mg/Ca from pink and white G. ruber in a decadal-resolution 1000-year sedimentary record from the Pigmy Basin. Based on this comparison we conclude that pink G. ruber is calcifying in warmer waters than co-occurring white G. ruber, suggesting differences in the relative seasonal distribution and depth habitat of the two varieties.

Demography and monitoring of Welsh's milkweed (Asclepias welshii) at Coral Pink Sand Dunes

Treesearch

Brent C. Palmer; L. Armstrong

2001-01-01

Results are presented of a 12-year monitoring program on the Coral Pink Sand Dunes and Sand Hills populations of the threatened Welsh's milkweed, Asclepias welshii N & P Holmgren. The species is an early sera1 member of the dune flora, colonizing blowouts and advancing with shifting dunes. When an area stabilizes and other vegetation encroaches, A. welshii is...

Data in support of qPCR primer design and verification in a Pink1 -/- rat model of Parkinson disease.

PubMed

Kelm-Nelson, Cynthia A; Stevenson, Sharon A; Ciucci, Michelle R

2016-09-01

Datasets provided in this article represent the Rattus norvegicus primer design and verification used in Pink1 -/- and wildtype Long Evans brain tissue. Accessible tables include relevant information, accession numbers, sequences, temperatures and product length, describing primer design specific to the transcript amplification use. Additionally, results of Sanger sequencing of qPCR reaction products (FASTA aligned sequences) are presented for genes of interest. Results and further interpretation and discussion can be found in the original research article "Atp13a2 expression in the periaqueductal gray is decreased in the Pink1 -/- rat model of Parkinson disease" [1].

[Isolation and preliminary characterization of carotenoids from pink-pigmented methylotrophs].

PubMed

Konovalova, A M; Shylin, S O; Rokytko, P V

2006-01-01

An effective method was developed for complete removal of pigments from the cells and solvent mixture for further separation of pigments using thin layer chromatography on silica gel. Carotenoid samples that have been obtained in this way are of good purity for further investigations. Carotenoid pigments of pink-pigmented facultative methylotrophic bacteria Methylobacterium have been characterized. These carotenoids are represented mainly by xanthophylls, particularly hydroxycarotenoids. Strains M. fujisawaense B-3365 and M. mesophilicum B-3352 also have nonpolar carotenes in a small amount. Physico-chemical properties of carotenoids have been studied.

Investigation on the Bay of Bengal branch of summer monsoon during normal and delayed onset over Gangetic West Bengal

NASA Astrophysics Data System (ADS)

Das, Debanjana; Mondal, Paramita; Saha, Poulomi; Chaudhuri, Sutapa

2018-06-01

The regional features of Bay of Bengal (BOB) branch of summer monsoon (SM) are examined to identify the causes of delayed onset over Gangetic West Bengal (GWB) in the years having normal onset over Kerala coast. The normal onset over both GWB and Kerala is designated as Normal-Normal (NN) years, while delayed onset over GWB and normal onset over Kerala is termed Normal-Delayed (ND) years. The temperature gradient (TTg), winds at 850 and 150 hPa pressure levels, sea-surface temperature (SST), outgoing long wave radiation (OLR), low-level moisture convergence, instability, and rainfall rate (RR) are analyzed in this study using National Centers for Environmental Prediction and National Oceanic and Atmospheric Administration reanalysis dataset during the period from 1981 to 2015. The result shows that TTg over BOB plays a significant role in controlling the movement of BOB branch of SM. Warm SST is observed to prevail over north BOB during NN years. The divergence at 150 hPa and convergence at 850 hPa pressure levels are found to influence the propagation of BOB branch of SM during both NN and ND years. The winds at 850 hPa level converge over BOB and GWB during NN years, whereas winds converge more over eastern BOB and Indo-Chinese peninsula during ND years. Result depicts abundance of low-level (850-1000 hPa) moisture over eastern BOB and Indo-Chinese peninsula during ND years, whereas moisture is observed to converge over north and north-eastern BOB during NN years. The RR is observed to be slightly higher during NN than ND years. However, it may not be concluded from the analysis that delayed onset over GWB will be responsible for less RR over the study region.

Growth and condition of juvenile chum and pink salmon in the northeastern Bering Sea

NASA Astrophysics Data System (ADS)

Wechter, Melissa E.; Beckman, Brian R.; Andrews, Alexander G., III; Beaudreau, Anne H.; McPhee, Megan V.

2017-01-01

As the Arctic continues to warm, abundances of juvenile Pacific salmon (Oncorhynchus spp.) in the northern Bering Sea are expected to increase. However, information regarding the growth and condition of juvenile salmon in these waters is limited. The first objective of this study was to describe relationships between size, growth, and condition of juvenile chum (O. keta) and pink (O. gorbuscha) salmon and environmental conditions using data collected in the northeastern Bering Sea (NEBS) from 2003-2007 and 2009-2012. Salmon collected at stations with greater bottom depths and cooler sea-surface temperature (SST) were longer, reflecting their movement further offshore out of the warmer Alaska Coastal Water mass, as the season progressed. Energy density, after accounting for fish length, followed similar relationships with SST and bottom depth while greater condition (weight-length residuals) was associated with warm SST and shallower stations. We used insulin-like growth factor-1 (IGF-1) concentrations as an indicator of relative growth rate for fishes sampled in 2009-2012 and that found fish exhibited higher IGF-1 concentrations in 2010-2012 than in 2009, although these differences were not clearly attributable to environmental conditions. Our second objective was to compare size and condition of juvenile chum and pink salmon in the NEBS between warm and cool spring thermal regimes of the southeastern Bering Sea (SEBS). This comparison was based on a hypothesis informed by the strong role of sea-ice retreat in the spring for production dynamics in the SEBS and prevailing northward currents, suggesting that feeding conditions in the NEBS may be influenced by production in the SEBS. We found greater length (both species) and condition (pink salmon) in years with warm thermal regimes; however, both of these responses changed more rapidly with day of year in years with cool springs. Finally, we compared indicators of energy allocation between even and odd brood

Ameliorating mitochondrial dysfunction restores carbon ion-induced cognitive deficits via co-activation of NRF2 and PINK1 signaling pathway.

PubMed

Liu, Yang; Yan, Jiawei; Sun, Cao; Li, Guo; Li, Sirui; Zhang, Luwei; Di, Cuixia; Gan, Lu; Wang, Yupei; Zhou, Rong; Si, Jing; Zhang, Hong

2018-07-01

Carbon ion therapy is a promising modality in radiotherapy to treat tumors, however, a potential risk of induction of late normal tissue damage should still be investigated and protected. The aim of the present study was to explore the long-term cognitive deficits provoked by a high-linear energy transfer (high-LET) carbon ions in mice by targeting to hippocampus which plays a crucial role in memory and learning. Our data showed that, one month after 4 Gy carbon ion exposure, carbon ion irradiation conspicuously resulted in the impaired cognitive performance, neurodegeneration and neuronal cell death, as well as the reduced mitochondrial integrity, the disrupted activities of tricarboxylic acid cycle flux and electron transport chain, and the depressed antioxidant defense system, consequently leading to a decline of ATP production and persistent oxidative damage in the hippocampus region. Mechanistically, we demonstrated the disruptions of mitochondrial homeostasis and redox balance typically characterized by the disordered mitochondrial dynamics, mitophagy and glutathione redox couple, which is closely associated with the inhibitions of PINK1 and NRF2 signaling pathway as the key regulators of molecular responses in the context of neurotoxicity and neurodegenerative disorders. Most importantly, we found that administration with melatonin as a mitochondria-targeted antioxidant promoted the PINK1 accumulation on the mitochondrial membrane, and augmented the NRF2 accumulation and translocation. Moreover, melatonin pronouncedly enhanced the molecular interplay between NRF2 and PINK1. Furthermore, in the mouse hippocampal neuronal cells, overexpression of NRF2/PINK1 strikingly protected the hippocampal neurons from carbon ion-elicited toxic insults. Thus, these data suggest that alleviation of the sustained mitochondrial dysfunction and oxidative stress through co-modulation of NRF2 and PINK1 may be in charge of restoration of the cognitive impairments in a mouse

Mfn2 ubiquitination by PINK1/parkin gates the p97-dependent release of ER from mitochondria to drive mitophagy

PubMed Central

McLelland, Gian-Luca; Goiran, Thomas; Yi, Wei; Dorval, Geneviève; Chen, Carol X; Lauinger, Nadine D; Krahn, Andrea I; Valimehr, Sepideh; Rakovic, Aleksandar; Rouiller, Isabelle; Durcan, Thomas M; Trempe, Jean-François

2018-01-01

Despite their importance as signaling hubs, the function of mitochondria-ER contact sites in mitochondrial quality control pathways remains unexplored. Here we describe a mechanism by which Mfn2, a mitochondria-ER tether, gates the autophagic turnover of mitochondria by PINK1 and parkin. Mitochondria-ER appositions are destroyed during mitophagy, and reducing mitochondria-ER contacts increases the rate of mitochondrial degradation. Mechanistically, parkin/PINK1 catalyze a rapid burst of Mfn2 phosphoubiquitination to trigger p97-dependent disassembly of Mfn2 complexes from the outer mitochondrial membrane, dissociating mitochondria from the ER. We additionally demonstrate that a major portion of the facilitatory effect of p97 on mitophagy is epistatic to Mfn2 and promotes the availability of other parkin substrates such as VDAC1. Finally, we reconstitute the action of these factors on Mfn2 and VDAC1 ubiquitination in a cell-free assay. We show that mitochondria-ER tethering suppresses mitophagy and describe a parkin-/PINK1-dependent mechanism that regulates the destruction of mitochondria-ER contact sites. PMID:29676259

Relationship between summer monsoon rainfall and cyclogenesis over Bay of Bengal during post-monsoon (October-December) season

NASA Astrophysics Data System (ADS)

Sadhuram, Y.; Maneesha, K.

2016-10-01

In this study, an attempt has been made to examine the relationship between summer monsoon rainfall (June-September) and the total number of depressions, cyclones and severe cyclones (TNDC) over Bay of Bengal during the post-monsoon (October-December) season. The seasonal rainfall of the subdivisions (located in south India) (referred as rainfall index - RI), is positively and significantly correlated ( r=0.59; significant at >99% level) with the TNDC during the period, 1984-2013. By using the first differences (current season minus previous season), the correlations are enhanced and a remarkably high correlation of 0.87 is observed between TNDC and RI for the recent period, 1993-2013. The average seasonal genesis potential parameter (GPP) showed a very high correlation of 0.84 with the TNDC. A very high correlation of 0.83 is observed between GPP and RI for the period, 1993-2013. The relative vorticity and mid-tropospheric relative humidity are found to be the dominant terms in GPP. The GPP was 3.5 times higher in above (below) normal RI in which TNDC was 4 (2). It is inferred that RI is playing a key role in TNDC by modulating the environmental conditions (low level vorticity and relative humidity) over Bay of Bengal during post-monsoon season which could be seen from the very high correlation of 0.87 (which explains 76% variability in TNDC). For the first time, we show that RI is a precursor for the TNDC over Bay of Bengal during post-monsoon season. Strong westerlies after the SW monsoon season transport moisture over the subdivisions towards Bay of Bengal due to cyclonic circulation. This circulation favours upward motion and hence transport moisture vertically to mid-troposphere which causes convective instability and this in turn favour more number of TNDC, under above-normal RI year.

Isolation of an unidentified pink-pigmented bacterium in a clinical specimen.

PubMed Central

Odugbemi, T; Nwofor, C; Joiner, K T

1988-01-01

An unidentified pink-pigmented bacterium isolated from a clinical specimen is reported. The organism was oxidase, urease, and catalase positive; it grew on Thayer-Martin and MacConkey media. The isolate is possibly similar to an unnamed taxon (G.L. Gilardi and Y.C. Faur, J. Clin. Microbiol. 20:626-629, 1984); however, it had unique characteristics of nonmotility with no flagellum detectable and was a gram-negative coccoid with a few rods in pairs and negative for starch hydrolysis. PMID:3384903

Isolation of an unidentified pink-pigmented bacterium in a clinical specimen.

PubMed

Odugbemi, T; Nwofor, C; Joiner, K T

1988-05-01

An unidentified pink-pigmented bacterium isolated from a clinical specimen is reported. The organism was oxidase, urease, and catalase positive; it grew on Thayer-Martin and MacConkey media. The isolate is possibly similar to an unnamed taxon (G.L. Gilardi and Y.C. Faur, J. Clin. Microbiol. 20:626-629, 1984); however, it had unique characteristics of nonmotility with no flagellum detectable and was a gram-negative coccoid with a few rods in pairs and negative for starch hydrolysis.

Periderm disorder syndrome”: A new name for the syndrome formerly referred to as pink eye

USDA-ARS?s Scientific Manuscript database

The “periderm disorder syndrome” (PDS), colloquially referred to previously as “pink eye”, is a physiological disorder caused by the death of the meristematically active layer of periderm cells (phellogen) and subsequent degeneration of the native periderm. This disorder occurs at a time when phel...

Asymmetric hybridization and introgression between pink salmon and chinook salmon in the Laurentian Great Lakes

USGS Publications Warehouse

Rosenfield, Jonathan A.; Todd, Thomas; Greil, Roger

2000-01-01

Among Pacific salmon collected in the St. Marys River, five natural hybrids of pink salmon Oncorhynchus gorbuscha and chinook salmon Oncorhynchus tshawytscha and one suspected backcross have been detected using morphologic, meristic, and color evidence. One allozyme (LDH, l-lactate dehydrogenase from muscle) and one nuclear DNA locus (growth hormone) for which species-specific fixed differences exist were analyzed to detect additional hybrids and to determine if introgression had occurred. Restriction fragment length polymorphism of mitochondrial DNA (mtDNA) was used to identify the maternal parent of each hybrid. Evidence of introgression was found among the five previously identified hybrids. All hybrid specimens had chinook salmon mtDNA, indicating that hybridization between chinook salmon and pink salmon in the St. Marys River is asymmetric and perhaps unidirectional. Ecological, physiological, and sexual selection forces may contribute to this asymmetric hybridization. Introgression between these highly differentiated species has implications for management, systematics, and conservation of Pacific salmon.

Evaluation of chronic arsenic poisoning due to consumption of contaminated ground water in West Bengal, India.

PubMed

Ghosh, Asutosh

2013-08-01

Chronic arsenic poisoning is an important public health problem and most notable in West Bengal and Bangladesh. In this study different systemic manifestations in chronic arsenic poisoning were evaluated. A nonrandomized, controlled, cross-sectional, observational study was carried out in Arsenic Clinic, Institute of Postgraduate Medical Education and Research, Kolkata, West Bengal, over a period of 1 year 4 months. Seventy-three cases diagnosed clinically, consuming water containing arsenic ≥50 μg/L and having hair and nail arsenic level >0.6 μg/L, were included. Special investigations included routine parameters and organ-specific tests. Arsenic levels in the drinking water, hair, and nail were measured in all. Twenty-five nonsmoker healthy controls were evaluated. Murshidabad and districts adjacent to Kolkata, West Bengal, were mostly affected. Middle-aged males were the common sufferers. Skin involvement was the commonest manifestation (100%), followed by hepatomegaly [23 (31.5%)] with or without transaminitis [7 (9.58%)]/portal hypertension [9 (12.33%)]. Restrictive abnormality in spirometry [11 (15.06%)], bronchiectasis [4 (5.47%)], interstitial fibrosis [2 (2.73%)], bronchogenic carcinoma [2 (2.73%)], oromucosal plaque [7 (9.58%)], nail hypertrophy [10 (13.69%)], alopecia [8 (10.95%)], neuropathy [5 (6.84%)], and Electrocardiography abnormalities [5 (6.84%)] were also observed. Mucocutaneous and nail lesions, hepatomegaly, and restrictive change in spirometry were the common and significant findings. Other manifestations were characteristic but insignificant.

First report of Seuratascaris numidica Seurat, 1917 (Nematoda: Ascarididae) and other helminths from amphibians of West Bengal, India.

PubMed

Sou, Sujan K; Bursey, Charles R

2017-03-01

Studies on nematode parasites from anuran hosts from Eastern India, particularly West Bengal, are rare. To our knowledge, there is a report of larvae of Monhysterides sp. (a fish parasite) from cysts within the body cavity and musculature of Duttaphrynus melanostictus, Hoplobatrachus tigerinus and Euphlyctis hexadactylus as well as descriptions of Aplectana duttaphryni from D. melanostictus , Aplectana dubrajpuri from H. tigerinus , Cosmocerca microhylae from Microhyla rubra and Rhabdias bulbicauda from D. melanostictus . Here, we report mature individuals of typical anuran parasites, Diplodiscus amphichrus and Seuratascaris numidica , from H. tigerinus and larvae of Acuariidae (a bird parasite) from Fejervarya limnocharis collected in Kulti, West Bengal.

Histochemical Characterization of Oocytes in the Pink Cuskeel (Genypterus blacodes).

PubMed

Cohen, Stefanía; Petcoff, Gladys; Freijo, Roberto O; Portiansky, Enrique L; Barbeito, Claudio G; Macchi, Gustavo J; Díaz, Alcira O

2015-08-01

In the present study we histochemically and lectinhistochemically characterized the growing oocytes of the pink cuskeel (Genypterus blacodes). We used histochemical methods for the localization and characterization of glycoconjugates (GCs) and lectin histochemical techniques for the identification of specific sugar residues. We analyzed presence and distribution of GCs in the different structures of the growing follicles (cortical alveoli, globules, yolk granules and zona radiata). During the initial stage of vitellogenesis, the oocytes presented small yolk granules composed of GCs that gradually increased during exogenous vitellogenesis. These GCs contained moderate quantities of α-D-mannose, D-glucose, N-acetylglucosamine and N-acetyl-neuraminic acid. The cortical alveoli contained both neutral and carboxylated GCs, and lectin techniques detected N-acetylgalactosamine, galactose and L-fucose. The zona radiata showed a strong positive reaction to PAS and it reacted weakly with more specific techniques, such as KOH/PA*S and PA/Bh/KOH/PAS. This structure showed GCs with oxidizable vicinal diols, O-acyl sugars and sialic acid residues with different substitution types and presented N-acetylgalactosamine and L-fucose specific residues. The oocytes follicular envelope evidenced neutral and acidic non-sulfated GCs and high concentrations of α-D-mannose, D-glucose, galactose and N-acetylgalactosamine. The intergranular cytoplasmic GCs were mainly rich in α-D-mannose, D-glucose, N-acetylgalactosamine, N-acetylglucosamine and N-acetyl-neuraminic acid. These results enhance the comprehension of the structure and functionality of the pink cuskeel ovarian follicles, and provide a useful tool for the study of this tissue in other teleost species.

Bay of Bengal Surface and Thermocline and the Arabian Sea

DTIC Science & Technology

2014-09-30

to the atmosphere. How low the SSS gets in the Bay of Bengal or how high in the Arabian Sea, depends on the oceanic exchanges between them via a...potential impact on the SST. 3 Figure 1a: Sea surface temperature (SST) and salinity ( SSS ) relationship during ASIRI 2013 cruises. The left panel...shows the hull ADCP vector, color-coded for SSS . The SST/ SSS scatter falls along a line from the warm/salty southern regions to the cool/fresher

Habitat Utilization by Juvenile Pink and Chum Salmon in Upper Resurrection Bay, Alaska

DTIC Science & Technology

1989-11-01

salmon Oncorhynchus kotez Chum salmon Untcorhynchua kisutch Coho salmon Orncorhynchus nerka Sockeye salmon Oncorhynchus tohawytacha Kink salmon...coho salmon, 40 Dolly Varden, 31 sculpin, 8 tomcod (Microgadus proxins), 17 starry flounder, and 10 sockeye salmon (0. nerka ) stomachs from Cliff and...AK. Godin, J. G. J. 1981. "Daily Patterns of Feeding Behavior, Daily Rations, and Diets of Juvenile Pink Salmon ( Oncorhynchus go’buscha) in Two

Cellulase production by pink pigmented facultative methylotrophic strains (PPFMs).

PubMed

Jayashree, Shanmugam; Lalitha, Rajendran; Vadivukkarasi, Ponnusamy; Kato, Yuko; Seshadri, Sundaram

2011-07-01

Pink pigmented facultative methylotrophs (PPFM) isolated from water samples of Cooum and Adyar rivers in Chennai and soil samples of forests located in various districts of Tamil Nadu, India were screened for cellulase production using carboxymethylcellulose agar (CMC agar) medium. The strains showed wide variations in the production of clearing zones around the colonies on CMC agar medium flooded with Congo red. CMCase and filter paper assays were used to quantitatively measure the cellulase activity of 13 PPFM strains. Among the strains, Methylobacterium gregans, MNW 60, MHW 109, MSF 34, and MSF 40 showed cellulolytic activity ranging from 0.73 to 1.16 U mL(-1) with wide temperature (35-65°C) and pH (5 to 8) tolerance. SDS-PAGE analysis of the crude enzyme of PPFM strain MNW 60 exhibited several protein bands, and zymogram analysis revealed two dimeric cellulase bands with molecular mass of ~92 and 42 kDa. Scanning electron microscopic studies revealed significant morphological differences between the cells grown in normal and CMC amended medium. The strain MNW 60 was identified as Methylobacterium sp. based on biochemical, physiological, and morphological analyses, and the methylotrophic nature was authenticated by the presence of mxaF gene, encoding methanol dehydrogenase as a key indicator enzyme of methylotrophs, with 99% similarity to Methylobacterium lusitanum. With the 16S ribosomal RNA sequence showing 97% similarity to M. lusitanum strain MP2, this can be proposed as a novel taxon of the genus Methylobacterium. The study forms the first detailed report on the extracellular cellulase production by pink pigmented Methylobacterium sp., and it is expected that this might be the basis for further studies on cellulase production by PPFMs to explore the molecular mechanism, strain improvement, and large-scale cellulase production for its application.

46 CFR 108.661 - Unit markings: Draft marks.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 4 2010-10-01 2010-10-01 false Unit markings: Draft marks. 108.661 Section 108.661... AND EQUIPMENT Equipment Markings and Instructions § 108.661 Unit markings: Draft marks. (a) Each unit must have draft marks for each foot of immersion— (1) If the unit is a surface unit, on both the port...

46 CFR 108.661 - Unit markings: Draft marks.

Code of Federal Regulations, 2014 CFR

2014-10-01

... 46 Shipping 4 2014-10-01 2014-10-01 false Unit markings: Draft marks. 108.661 Section 108.661... AND EQUIPMENT Equipment Markings and Instructions § 108.661 Unit markings: Draft marks. (a) Each unit must have draft marks for each foot of immersion— (1) If the unit is a surface unit, on both the port...

46 CFR 108.661 - Unit markings: Draft marks.

Code of Federal Regulations, 2013 CFR

2013-10-01

... 46 Shipping 4 2013-10-01 2013-10-01 false Unit markings: Draft marks. 108.661 Section 108.661... AND EQUIPMENT Equipment Markings and Instructions § 108.661 Unit markings: Draft marks. (a) Each unit must have draft marks for each foot of immersion— (1) If the unit is a surface unit, on both the port...

46 CFR 108.661 - Unit markings: Draft marks.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 46 Shipping 4 2011-10-01 2011-10-01 false Unit markings: Draft marks. 108.661 Section 108.661... AND EQUIPMENT Equipment Markings and Instructions § 108.661 Unit markings: Draft marks. (a) Each unit must have draft marks for each foot of immersion— (1) If the unit is a surface unit, on both the port...

46 CFR 108.661 - Unit markings: Draft marks.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 46 Shipping 4 2012-10-01 2012-10-01 false Unit markings: Draft marks. 108.661 Section 108.661... AND EQUIPMENT Equipment Markings and Instructions § 108.661 Unit markings: Draft marks. (a) Each unit must have draft marks for each foot of immersion— (1) If the unit is a surface unit, on both the port...

Air-sea CO2 flux pattern along the southern Bay of Bengal waters

NASA Astrophysics Data System (ADS)

Shanthi, R.; Poornima, D.; Naveen, M.; Thangaradjou, T.; Choudhury, S. B.; Rao, K. H.; Dadhwal, V. K.

2016-12-01

Physico-chemical observations made from January 2013 to March 2015 in coastal waters of the southwest Bay of Bengal show pronounced seasonal variation in physico-chemical parameters including total alkalinity (TA: 1927.390-4088.642 μmol kg-1), chlorophyll (0.13-19.41 μg l-1) and also calculated dissolved inorganic carbon (DIC: 1574.219-3790.954 μmol kg-1), partial pressure of carbon dioxide (pCO2: 155.520-1488.607 μatm) and air-sea CO2 flux (FCO2: -4.808 to 11.255 mmol Cm-2 d-1). Most of the physical parameters are at their maximum during summer due to the increased solar radiation at cloud free conditions, less or no riverine inputs, and lack of vertical mixing of water column which leads to the lowest nutrients concentration, dissolved oxygen (DO), biological production, pCO2 and negative flux of CO2 to the atmosphere. Chlorophyll and DO concentrations enhanced due to increased nutrients during premonsoon and monsoon season due to the vertical mixing of water column driven by the strong winds and external inputs at respective seasons. The constant positive loading of nutrients, TA, DIC, chlorophyll, pCO2 and FCO2 against atmospheric temperature (AT), lux, sea surface temperature (SST), pH and salinity observed in principal component analysis (PCA) suggested that physical and biological parameters play vital role in the seasonal distribution of pCO2 along the southwest Bay of Bengal. The annual variability of CO2 flux clearly depicted that the southwest Bay of Bengal switch from sink (2013) to source status in the recent years (2014 and 2015) and it act as significant source of CO2 to the atmosphere with a mean flux of 0.204 ± 1.449 mmol Cm-2 d-1.

Genetic and metabolic diversity of pink-pigmented facultative methylotrophs in phyllosphere of tropical plants.

PubMed

Balachandar, D; Raja, P; Sundaram, Sp

2008-01-01

Diversity of Pink-Pigmented Facultative Methylotrophs (PPFMs) in phyllosphere of cotton, maize and sunflower was determined based on differential carbon-substrate utilization profile and Random Amplified Polymorphic DNA data. Results indicate that six diversified groups of PPFMs are found in these crops. Sunflower and maize phyllosphere harbor four different groups of methylobacteria while cotton has only two groups.

Identification of pink-pigmented bacteria isolated from environmental water samples and their biofilm formation abilities.

PubMed

Furuhata, Katsunori; Kato, Yuko; Goto, Keiichi; Saitou, Keiko; Sugiyama, Jun-Ichi; Hara, Motonobu; Fukuyama, Masahumi

2008-06-01

Sixty-seven strains of pink-pigmented bacteria, which were isolated from environmental water samples collected nationwide, were identified by partial 16S rDNA sequence analysis. In addition, the biofilm formation ability of the isolates was experimentally investigated. We could identify only 2 strains at the species level: Pedobacter roseus HS-38 and Runella slithyformis HS-77. The results showed that of the strains tested, 22 strains (32.8%) were Pedobacter spp., which was most frequently identified, followed by 19 strains (28.4%) of Arcicella spp., 16 strains (23.9%) of Deinococcus spp., 5 strains (7.5%) of Roseomonas spp., 4 strains (6.0%) of Flectobacillus spp. and 1 strain (1.5%) of Runella sp. Most isolates showed low similarity values to previously known species, and they were found to be novel species. At a result, it was difficult to identify environmental water-derived pink-pigmented bacteria at the species level. On the other hand, when we measured the absorbance by the crystal violet staining to examine the quantities of biofilm formation of these strains, fifty-five (82.0%) of the 67 isolates formed biofilm. The absorbance of Deinococcus sp. HS-75 was the highest (3.56). When comparing the absorbance values among the genera, Roseomonas spp. showed the highest absorbance (mean:1.62), followed by Deinococcus spp. (mean: 1.03), and Arcicella spp. (mean: 1.01). Strains of Flectobacillus spp. (mean: 0.48) and Pedobacter spp. (mean: 0.42) showed lower absorbance values. As above, it was shown that, at the species level, the pink-pigmented bacteria in the water in the Japanese environment had various levels of ability to form biofilm.

Estimation of Geotropic Currents in the Bay of Bengal using In-situ Observations.

NASA Astrophysics Data System (ADS)

T, V. R.

2014-12-01

Geostraphic Currents (GCs) can be estimated from temperature and salinity observations. In this study an attempt has been made to compute GC using temperature and salinity observations from Expendable Bathy Thermograph (XBT) and CTD over Bay of Bengal (BoB). Although in recent time we have Argo observations but it is for a limited period and coarse temporal resolutions. In BoB Bengal, where not enough simultaneous hydrographic temperature and salinity data are available with reasonable spatial resolution (~one degree spatial resolution) and for a longer period. To overcome the limitations of GC computed from XBT profiles, temperature-salinity relationships were used from simultaneous temperature and salinity observations. We have demonstrated that GCs can be computed with an accuracy of less than 8.5 cm/s (root mean square error) at the surface with respect to temperature from XBT and salinity from climatological record. This error reduces with increasing depth. Finally, we demonstrated the application of this approach to study the temporal variation of the GCs during 1992 to 2012 along an XBT transect.

Degradation mechanism of Direct Pink 12B treated by iron-carbon micro-electrolysis and Fenton reaction.

PubMed

Wang, Xiquan; Gong, Xiaokang; Zhang, Qiuxia; Du, Haijuan

2013-12-01

The Direct Pink 12B dye was treated by iron-carbon micro-electrolysis (ICME) and Fenton oxidation. The degradation pathway of Direct Pink 12B dye was inferred by ultraviolet visible (UV-Vis), infrared absorption spectrum (IR) and high performance liquid chromatography-mass spectrometry (HPLC-MS). The major reason of decolorization was that the conjugate structure was disrupted in the iron-carbon micro-electrolysis (ICME) process. However, the dye was not degraded completely because benzene rings and naphthalene rings were not broken. In the Fenton oxidation process, the azo bond groups surrounded by higher electron cloud density were first attacked by hydroxyl radicals to decolorize the dye molecule. Finally benzene rings and naphthalene rings were mineralized to H2O and CO2 under the oxidation of hydroxyl radicals. Copyright © 2013 The Research Centre for Eco-Environmental Sciences, Chinese Academy of Sciences. Published by Elsevier B.V. All rights reserved.

Numerical study of hydrodynamic and salinity transport processes in the Pink Beach wetlands of the Liao River estuary, China

NASA Astrophysics Data System (ADS)

Qiao, Huiting; Zhang, Mingliang; Jiang, Hengzhi; Xu, Tianping; Zhang, Hongxing

2018-06-01

Interaction studies of vegetation within flow environments are essential for the determination of bank protection, morphological characteristics and ecological conditions for wetlands. This paper uses the MIKE 21 hydrodynamic and salinity model to simulate the hydrodynamic characteristics and salinity transport processes in the Pink Beach wetlands of the Liao River estuary. The effect of wetland plants on tidal flow in wetland areas is represented by a varying Manning coefficient in the bottom friction term. Acquisition of the vegetation distribution is based on Landsat TM satellites by remote sensing techniques. Detailed comparisons between field observation and simulated results of water depth, salinity and tidal currents are presented in the vegetated domain of the Pink Beach wetlands. Satisfactory results were obtained from simulations of both flow characteristics and salinity concentration, with or without vegetation. A numerical experiment was conducted based on variations in vegetation density, and compared with the tidal currents in non-vegetated areas; the computed current speed decreased remarkably with an increase in vegetation density. The impact of vegetation on water depth and salinity was simulated, and the findings revealed that wetland vegetation has an insignificant effect on the water depth and salinity in this wetland domain. Several stations (from upstream to downstream) in the Pink Beach wetlands were selected to estimate the longitudinal variation of salinity under different river runoff conditions; the results showed that salinity concentration decreases with an increase in river runoff. This study can consequently help increase the understanding of favourable salinity conditions for particular vegetation growth in the Pink Beach wetlands of the Liao River estuary. The results also provide crucial guidance for related interaction studies of vegetation, flow and salinity in other wetland systems.

Panel of polymorphic heterologous microsatellite loci to genotype critically endangered Bengal tiger: a pilot study.

PubMed

Mishra, Sudhanshu; Singh, Sujeet Kumar; Munjal, Ashok Kumar; Aspi, Jouni; Goyal, Surendra Prakash

2014-01-03

In India, six landscapes and source populations that are important for long-term conservation of Bengal tigers (Panthera tigris tigris) have been identified. Except for a few studies, nothing is known regarding the genetic structure and extent of gene flow among most of the tiger populations across India as the majority of them are small, fragmented and isolated. Thus, individual-based relationships are required to understand the species ecology and biology for planning effective conservation and genetics-based individual identification has been widely used. But this needs screening and describing characteristics of microsatellite loci from DNA from good-quality sources so that the required number of loci can be selected and the genotyping error rate minimized. In the studies so far conducted on the Bengal tiger, a very small number of loci (n = 35) have been tested with high-quality source of DNA, and information on locus-specific characteristics is lacking. The use of such characteristics has been strongly recommended in the literature to minimize the error rate and by the International Society for Forensic Genetics (ISFG) for forensic purposes. Therefore, we describe for the first time locus-specific genetic and genotyping profile characteristics, crucial for population genetic studies, using high-quality source of DNA of the Bengal tiger. We screened 39 heterologous microsatellite loci (Sumatran tiger, domestic cat, Asiatic lion and snow leopard) in captive individuals (n = 8), of which 21 loci are being reported for the first time in the Bengal tiger, providing an additional choice for selection. The mean relatedness coefficient (R = -0.143) indicates that the selected tigers were unrelated. Thirty-four loci were polymorphic, with the number of alleles ranging from 2 to 7 per locus, and the remaining five loci were monomorphic. Based on the PIC values (> 0.500), and other characteristics, we suggest that 16 loci (3 to 7 alleles) be used for genetic

Extended Essay Marking on Screen: Is Examiner Marking Accuracy Influenced by Marking Mode?

ERIC Educational Resources Information Center

Johnson, Martin; Hopkin, Rebecca; Shiell, Hannah; Bell, John F.

2012-01-01

In the UK and elsewhere, large-scale educational assessment agencies are shifting the mode of school examination marking towards having examiners mark examination scripts on screen rather than on paper. This shift has prompted questions about whether the mode of marking might influence examiner marking accuracy, particularly in relation to…

First steps for mitigating bycatch of Pink-footed Shearwaters Ardenna creatopus: Identifying overlap of foraging areas and fisheries in Chile

USGS Publications Warehouse

Carle, Ryan; Felis, Jonathan J.; López, Verónica; Adams, Josh; Hodum, Peter; Beck, Jessie; Colodro, Valentina; Vega, Rodrigo; González, Andrés

2016-01-01

The Pink-footed Shearwater, Ardenna creatopus, is listed as in danger of extinction by Chile and under Annex 1 of ACAP, with an estimated global population of approximately 56,000 individuals. Incidental bycatch of this species in fisheries is thought to be an important cause in population decline (i.e. annual estimated mortality of >1000 adults). This species is an endemic breeder in Chile, nesting only on the Juan Fernandez Archipelago (JFI; 30% of global population), and Isla Mocha (70% of global population). Using miniature GPS and satellite transmitters, we determined foraging areas of Pink-footed Shearwaters during the chick-rearing period in 2002 (JFI) and 2015-2016 (Isla Mocha). We overlaid shearwater tracking data with data from the Instituto de Fomento Pesquero (IFOP) on fishing effort in Chile (type of fishery, number sets per day, location of sets, and target species) to identify fisheries and fishing zones with the greatest potential for Pink-footed Shearwater bycatch. During the 2002-2006 (N = 28 birds total) and 2015 (N = 18 birds) breeding periods, foraging areas were associated with the continental shelf and shelf-break, generally less than 30 km offshore. All foraging trips occurred between 31.5 and 40.0 degrees south, and birds remained in Chile territorial waters 100% of the time. We identified two primary foraging hotspots, one offshore near Talcahuano, Chile (approximately 36-37.5° south), and one offshore north of Valdivia, Chile (approximately 39-39.5° south). Birds tracked from the Juan Fernández Archipelago foraged in the Talcahuano hotspot but did not visit the southerly hotspot near Valdivia. Birds tracked from Isla Mocha used both areas, with a greater proportion of birds using the Valdivia hotspot than the Talcahuano hotspot. Other major areas of use were around the respective breeding colonies from which the birds were tracked. Overlay of these data with fisheries data is currently in progress. Preliminary results indicate

Topical liposomal Rose Bengal for photodynamic white hair removal: randomized, controlled, double-blind study.

PubMed

Samy, Nevien; Fadel, Maha

2014-04-01

Blond and white hair removal by laser is a complicated task with weak satisfactory results due to the deficiency in laser-absorbing chromophore. To investigate if repetitive sessions of photodynamic therapy (PDT) using external application of liposomal Rose bengal (RB) photosensitizer followed by intense pulsed light (IPL) exposure enables removal of gray and white hair. Rose bengal loaded in liposomes (LRB) was constructed, prepared in hydrogel, and was studied for some pharmaceutical properties. Penetration and selective hair follicle damage in mice skin were studied. Topical gel containing LRB was used for treating fifteen adult females who were complaining of facial white terminal hair. Unwanted facial hair was treated for three sessions at intervals of 4-6 weeks using intense pulsed light (IPL). At each session, the treatment area was pre-treated with topical LRB gel, while a control group of another 15 patients applied placebo gel before IPL treatment. Evaluations included hair regrowth, which was measured 4 weeks after each treatment session and at 6 months follow-up by counting the number of terminal hair compared with baseline pretreatment values. Treatment outcomes and complications if any were also reported. Average hair regrowth in the LRB group was 56% after 3 treatment cycles. After six-months follow up, average terminal hair count compared with baseline pretreatment showed 40% reduction and no recorded side effects. A significant difference (P<0.05) was seen compared with the control group; the clinical results were promising. Photodynamic hair removal using rose bengal-encapsulated liposomal gel in combination with IPL treatment showed significant efficacy in the treatment of white hair compared with a control group.

Abdominal pythiosis in a Bengal tiger (Panthera tigris tigris).

PubMed

Buergelt, Claus; Powe, Joshua; White, Tamara

2006-06-01

An adult Bengal tiger (Panthera tigris tigris) housed in an outdoor sanctuary in Florida exhibited vomiting, diarrhea, and weight loss. A clinical workup did not reveal the source of the clinical signs and antibiotic therapy was unrewarding. Radiographs revealed the presence of an abdominal mass. The tiger died during an immobilization for a follow-up clinical examination. A necropsy was performed and tissue samples of intestine and mesenteric lymph nodes were submitted for histopathologic diagnosis. A pyogranulomatous panenteritis and lymphadenitis with intralesional hyphae led to a presumptive etiologic diagnosis of intestinal/abdominal pythiosis. The diagnosis of pythiosis was confirmed by serology and immunoblotting.

The mitochondria-targeted antioxidant MitoQ ameliorated tubular injury mediated by mitophagy in diabetic kidney disease via Nrf2/PINK1.

PubMed

Xiao, Li; Xu, Xiaoxuan; Zhang, Fan; Wang, Ming; Xu, Yan; Tang, Dan; Wang, Jiahui; Qin, Yan; Liu, Yu; Tang, Chengyuan; He, Liyu; Greka, Anna; Zhou, Zhiguang; Liu, Fuyou; Dong, Zheng; Sun, Lin

2017-04-01

Mitochondria play a crucial role in tubular injury in diabetic kidney disease (DKD). MitoQ is a mitochondria-targeted antioxidant that exerts protective effects in diabetic mice, but the mechanism underlying these effects is not clear. We demonstrated that mitochondrial abnormalities, such as defective mitophagy, mitochondrial reactive oxygen species (ROS) overexpression and mitochondrial fragmentation, occurred in the tubular cells of db/db mice, accompanied by reduced PINK and Parkin expression and increased apoptosis. These changes were partially reversed following an intraperitoneal injection of mitoQ. High glucose (HG) also induces deficient mitophagy, mitochondrial dysfunction and apoptosis in HK-2 cells, changes that were reversed by mitoQ. Moreover, mitoQ restored the expression, activity and translocation of HG-induced NF-E2-related factor 2 (Nrf2) and inhibited the expression of Kelch-like ECH-associated protein (Keap1), as well as the interaction between Nrf2 and Keap1. The reduced PINK and Parkin expression noted in HK-2 cells subjected to HG exposure was partially restored by mitoQ. This effect was abolished by Nrf2 siRNA and augmented by Keap1 siRNA. Transfection with Nrf2 siRNA or PINK siRNA in HK-2 cells exposed to HG conditions partially blocked the effects of mitoQ on mitophagy and tubular damage. These results suggest that mitoQ exerts beneficial effects on tubular injury in DKD via mitophagy and that mitochondrial quality control is mediated by Nrf2/PINK. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Sanctified madness: the God-intoxicated saints of Bengal.

PubMed

Morinis, A

1985-01-01

The saintly madman is a familiar character in South Asia. To outer appearances he is no different from a lunatic, but the mad saint comes to be revered because his idiocy is popularly believed to arise from a different cause than ordinary madness. The common psychopath neglects social conventions because his consciousness is dimmed by incapacity; the saintly madman also breaches convention, but does so because his heightened consciousness has liberated him from the bonds of convention that entrap ordinary people. In the terms of Hinduism, he has tasted the divine nectar of God-realization and has returned to the human realm intoxicated by the experience. In this paper two popular God intoxicated saints of Bengal are discussed. The question is posed whether 'God intoxication' can be considered a culture-bound syndrome of Bengal. The concept of 'culture bound syndrome' is found to be too narrow to encompass the most significant issues to arise from reflection on the characteristics of the God intoxicated. These larger issues have to do with the relationship between cultural practices and models and mental states (whether deviant, as implied by the term 'syndrome' although deviance does not always carry the negative connotation implicit in 'syndrome', or normal). It is suggested that all cultures culture a limited range of mental states and thus the questions posed by the notion of culture bound syndromes are subsumed by larger questions about the relationship of all mind-states to the socio-cultural environment which conditions them. The conclusion is that God intoxication is indeed a uniquely Bengali mental condition, with variants throughout South Asia and kinship to other mystical states, but that the concept of 'syndrome' is not useful.

Genetic and metabolic diversity of pink-pigmented facultative methylotrophs in phyllosphere of tropical plants

PubMed Central

Balachandar, D.; Raja, P.; Sundaram, SP.

2008-01-01

Diversity of Pink-Pigmented Facultative Methylotrophs (PPFMs) in phyllosphere of cotton, maize and sunflower was determined based on differential carbon-substrate utilization profile and Random Amplified Polymorphic DNA data. Results indicate that six diversified groups of PPFMs are found in these crops. Sunflower and maize phyllosphere harbor four different groups of methylobacteria while cotton has only two groups. PMID:24031182

Intercomparison of Air-Sea Fluxes in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Buckley, J.; Weller, R. A.; Farrar, J. T.; Tandon, A.

2016-02-01

Heat and momentum exchange between the air and sea in the Bay of Bengal is an important driver of atmospheric convection during the Asian Monsoon. Warm sea surface temperatures resulting from salinity stratified shallow mixed layers trigger widespread showers and thunderstorms. In this study, we compare atmospheric reanalysis flux products to air-sea flux values calculated from shipboard observations from four cruises and an air-sea flux mooring in the Bay of Bengal as part of the Air-Sea Interactions in the Northern Indian Ocean (ASIRI) experiment. Comparisons with months of mooring data show that most long timescale reanalysis error arises from the overestimation of longwave and shortwave radiation. Ship observations and select data from the air-sea flux mooring reveals significant errors on shorter timescales (2-4 weeks) which are greatly influenced by errors in shortwave radiation and latent and sensible heat. During these shorter periods, the reanalyses fail to properly show sharp decreases in air temperature, humidity, and shortwave radiation associated with mesoscale convective systems. Simulations with the Price-Weller-Pinkel (PWP) model show upper ocean mixing and deepening mixed layers during these events that effect the long term upper ocean stratification. Mesoscale convective systems associated with cloudy skies and cold and dry air can reduce net heat into the ocean for minutes to a few days, significantly effecting air-sea heat transfer, upper ocean stratification, and ocean surface temperature and salinity.

Risk of arsenic exposure from drinking water and dietary components: implications for risk management in rural Bengal.

PubMed

Halder, Dipti; Bhowmick, Subhamoy; Biswas, Ashis; Chatterjee, Debashis; Nriagu, Jerome; Guha Mazumder, Debendra Nath; Šlejkovec, Zdenka; Jacks, Gunnar; Bhattacharya, Prosun

2013-01-15

This study investigates the risk of arsenic (As) exposure to the communities in rural Bengal, even when they have been supplied with As safe drinking water. The estimates of exposure via dietary and drinking water routes show that, when people are consuming water with an As concentration of less than 10 μg L(-1), the total daily intake of inorganic As (TDI-iAs) exceeds the previous provisional tolerable daily intake (PTDI) value of 2.1 μg day(-1) kg(-1) BW, recommended by the World Health Organization (WHO) in 35% of the cases due to consumption of rice. When the level of As concentration in drinking water is above 10 μg L(-1), the TDI-iAs exceeds the previous PTDI for all the participants. These results imply that, when rice consumption is a significant contributor to the TDI-iAs, supplying water with an As concentration at the current national drinking water standard for India and Bangladesh would place many people above the safety threshold of PTDI. We also found that the consumption of vegetables in rural Bengal does not pose a significant health threat to the population independently. This study suggests that any effort to mitigate the As exposure of the villagers in Bengal must consider the risk of As exposure from rice consumption together with drinking water.

Reconnaissance Report for Hydropower Redevelopment at Sault Ste. Marie, Michigan.

DTIC Science & Technology

1981-01-01

Pink Salmon Oncorhynchus gorbuscha Round Whitefish Prosopium cylindraceum Cisco Coregonus spp. Northern Pike Esox lucius White Sucker Catostomus...from white to mottled pink and purple- scattered white and gray reduction spots are abundant. The bedding is irregular and characterized by ripple marks...Brook trout x lake trout Coho Salmon Oncorhynchus kisutch Chinook Salmon Oncorhynchus tshawytscha Pink Salmon Oncorhynchus gorbuscha Round Whitefish

Is a Pink Cow Still a Cow? Individual Differences in Toddlers' Vocabulary Knowledge and Lexical Representations.

PubMed

Perry, Lynn K; Saffran, Jenny R

2017-05-01

When a toddler knows a word, what does she actually know? Many categories have multiple relevant properties; for example, shape and color are relevant to membership in the category banana. How do toddlers prioritize these properties when recognizing familiar words, and are there systematic differences among children? In this study, toddlers viewed pairs of objects associated with prototypical colors. On some trials, objects were typically colored (e.g., Holstein cow and pink pig); on other trials, colors were switched (e.g., pink cow and Holstein-patterned pig). On each trial, toddlers were directed to find a target object. Overall, recognition was disrupted when colors were switched, as measured by eye movements. Moreover, individual differences in vocabularies predicted recognition differences: Toddlers who say fewer shape-based words were more disrupted by color switches. "Knowing" a word may not mean the same thing for all toddlers; different toddlers prioritize different facets of familiar objects in their lexical representations. Copyright © 2016 Cognitive Science Society, Inc.

Allogenic and Autogenic Signals in the Detrital Zircon U-Pb Record of the Deep-Sea Bengal Fan

NASA Astrophysics Data System (ADS)

Blum, M. D.; Rogers, K. G.; Gleason, J. D.; Najman, Y.

2017-12-01

The Himalayan-sourced Ganges-Brahmaputra river system and the deep-sea Bengal Fan represent Earth's largest sediment-dispersal system. This presentation summarizes a new detrital zircon U-Pb (DZ) provenance record from the Bengal Fan from cores collected during IODP Expedition 354, with coring sites located 1350 km downdip from the shelf margin. Each of our 15 samples were collected from medium- to fine-grained turbidite sand and, based on shipboard biostratigraphic analyses, our samples are late Miocene to late Pleistocene in age. Each sample was analyzed by LA-ICPMS at the Arizona Laserchron facility, with an average of n=270 concordant U-Pb ages per sample. Our goals are to use these data to evaluate the influence of allogenic controls vs. autogenic processes on signal propagation from source-to-sink. At the first order, large-scale sediment transfer to the Bengal Fan clearly records the strong tectonic and climatic forcing associated with the Himalayas and Ganges-Brahmaputra system: after up to 2500 km of river transport, and 1350 km of transport in turbidity currents, the DZ record faithfully represents Himalayan source terrains. The sand-rich turbidite part of the record is nevertheless biased towards glacial periods when rivers extended across the shelf in response to climate-forced sea-level fall, and discharged directly to slope canyons. However, only part of the Bengal Fan DZ record represents either the Ganges or the Brahmaputra, with most samples representing varying degrees of mixing of sediments from the two systems: this mixing, or the lack thereof, represents the signal of autogenic avulsions on the delta plain that result in the two river systems delivering sediment separately to the shelf margin, or together as they do today. Within the allogenic framework established by tectonic processes, the climatic system, and global climate-forced sea-level change, the DZ U-Pb record of sediment mixing or the lack thereof provides a fingerprint of autogenic

The Coming Right-Brain Economy: Daniel H. Pink Says the MFA Is the New MBA

ERIC Educational Resources Information Center

Connection: The Journal of the New England Board of Higher Education, 2005

2005-01-01

According to a recent "Harvard Business Review" piece by author Daniel H. Pink, MBA graduates are, in many ways, becoming this century's blue-collar workers--people who entered a workforce that was full of promise only to see their jobs move overseas. At the same time, businesses are realizing that the only way to differentiate their goods and…

Push-Pull Factors of Undocumented Migration from Bangladesh to West Bengal: A Perception Study

ERIC Educational Resources Information Center

Datta, Pranati

2004-01-01

Movement is an integral part of human existence. While talking about transborder migration from Bangladesh to India, we are, however, aware that this is a controversial subject. The partition of Bengal in 1947 was the cruelest partition in the history of the world and caused forced illegal migration from erstwhile East Pakistan. It is estimated…

Carotenoid Profile, Antioxidant Capacity, and Chromoplasts of Pink Guava (Psidium guajava L. Cv. 'Criolla') during Fruit Ripening.

PubMed

Rojas-Garbanzo, Carolina; Gleichenhagen, Maike; Heller, Annerose; Esquivel, Patricia; Schulze-Kaysers, Nadine; Schieber, Andreas

2017-05-10

Pigments of pericarp and pulp of pink guava (Psidium guajava L. cv. 'Criolla') were investigated to elucidate the profile and the accumulation of main carotenoids during four stages of fruit ripening by using HPLC-DAD and APCI-MS/MS analysis. Seventeen carotenoids were identified, and changes in their profile during fruit ripening were observed. The carotenoids all-trans-β-carotene, 15-cis-lycopene, and all-trans-lycopene were present in all ripening stages, but all-trans-lycopene was found to be predominant (from 63% to 92% of total carotenoids) and responsible for the high lipophilic antioxidant capacity determined by spectrophotometric assays. By using light and transmission electron microscopy, the development of chromoplasts in pericarp and pulp was demonstrated. The accumulation of all-trans-lycopene and all-trans-β-carotene coincided with the development of large crystals; the chromoplasts of pink guava belong, therefore, to the crystalline type.

Fe3O4@Au@mSiO2 as an enhancing nanoplatform for Rose Bengal photodynamic activity.

PubMed

Rosa-Pardo, I; Roig-Pons, M; Heredia, A A; Usagre, J V; Ribera, A; Galian, R E; Pérez-Prieto, J

2017-07-27

A novel nanoplatform composed of three types of materials with different functionalities, specifically core-shell Fe 3 O 4 @Au nanoparticles encapsulated near the outer surface of mesoporous silica (mSiO 2 ) nanoparticles, has been successfully synthesised and used to enhance the efficiency of a photosensitiser, namely Rose Bengal, in singlet oxygen generation. Fe 3 O 4 is responsible for the unusual location of the Fe 3 O 4 @Au nanoparticle, while the plasmonic shell acts as an optical antenna. In addition, the mesoporous silica matrix firmly encapsulates Rose Bengal by chemical bonding inside the pores, thus guaranteeing its photostability, and in turn making the nanosystem biocompatible. Moreover, the silica surface of the nanoplatform ensures further functionalisation on demand.

Bay of Bengal Exhibits Warming Trend During the Younger Dryas: Implications of AMOC

NASA Astrophysics Data System (ADS)

Panmei, Champoungam; Divakar Naidu, Pothuri; Mohtadi, Mahyar

2017-12-01

A sharp decline in temperature during the Younger Dryas (YD) preceding the current warmer Holocene is well documented in climate archives from the Northern Hemisphere high latitudes. Although the magnitude of YD cooling varied spatially, the response of YD cooling was well documented in the Atlantic and Pacific Oceans but not in the Indian Ocean. Here we investigate whether the modern remote forcing of tropical Indian Ocean sea surface temperature (SST) by Northern Hemisphere climate changes holds true for events such as the YD. Our SST reconstruction from the western Bay of Bengal exhibits an overall warming of ˜1.8°C during the YD. We further compared our data with other existing Mg/Ca-based SST records from the Northern Indian Ocean and found no significant negative SST anomalies in both the Arabian Sea and the Bay of Bengal compared to pre- and post-YD, suggesting that no apparent cooling occurred during the YD in the Northern Indian Ocean. In contrast, most part of the YD exhibits positive SST anomalies in the Northern Indian Ocean that coincide with the slowdown of the Atlantic Meridional Overturning Circulation during this period.

Molecular analysis of microbial community in arsenic-rich groundwater of Kolsor, West Bengal.

PubMed

Sarkar, Angana; Paul, Dhiraj; Kazy, Sufia K; Sar, Pinaki

2016-01-01

Bacterial community composition within the highly arsenic (As) contaminated groundwater from Kolsur, West Bengal was analyzed over a period of 3 years using 16S rRNA gene clone library and Denaturing Gradient Gel Electrophoresis (DGGE). Molecular phylogenetic study revealed abundance of α-Proteobacteria (56%) and Firmicutes (29%) along with members of β-Proteobacteria, Verrucomicrobia and Sphingobacteria as relatively minor groups. Along with consistent physicochemical environment, a stable microbial community structure comprising of bacterial genera Agrobacterium-Rhizobium, Ochrobactrum, Pseudomonas, Anoxybacillus and Penibacillus was recorded over the three years study period. Presence of cytosolic arsenate reductase (arsC) gene was observed within the microbial community. Phylogenetic analyses revealed that all the arsC sequences were closely related to the same gene from γ-proteobacterial members while the community was consisted of mainly α-proteobacterial groups. Such phylogenetic incongruence between 16S rRNA and arsC genes possibly indicated horizontal gene transfer (HGT) of the ars genes within the groundwater community. Overall, the study reported a nearly stable geomicrobial environment and genetic determinant related to As homeostasis gene, and provided a better insight on biogeochemistry of As contaminated aquifer of West Bengal.

RiceCAP: Comparison of sheath blight QTLs in two Bengal/O. nivara advanced backcross mapping populations

USDA-ARS?s Scientific Manuscript database

Two advanced backcross populations were developed between a popular southern US tropical japonica rice (Oryza sativa L.) cultivar Bengal and two different of Oryza nivara (IRGC100898; IRGC104705) accessions to identify quantitative trait loci (QTLs) related to sheath blight (SB) disease resistance. ...

Application of individual foraminifera Mg/Ca and δ18O analyses for paleoceanographic reconstructions in the Bay of Bengal and other active depositional environments

NASA Astrophysics Data System (ADS)

Fritz-Endres, T.; Dekens, P.; Fehrenbacher, J. S.; Spero, H. J.; Stine, A.

2017-12-01

Paleoceanographic research traditionally focuses on regions where sediment deposition is minimally affected by transport. However, sediment fans near tectonically active regions provide an opportunity to link oceanographic climate to terrestrial processes. Sediment cores recovered during IODP Expedition 354 in the Bay of Bengal include hemipelagic sections that record the history of tectonic uplift and the development of the Indian Monsoon through the last 10 Ma. Although these cores provide a unique opportunity to link marine and terrestrial climate, the complex depositional environment requires that the source of foraminifera is carefully considered before using these proxies to reconstruct oceanographic conditions. Foraminifera in Bengal Fan sediments may have been transported via turbidity currents from the northern Bay of Bengal, where the seasonal variability of SST and SSS is larger compared to the southern Bay of Bengal. We measured single Globigerinoides sacculifer Mg/Ca and δ18O from mudline samples of IODP Site U1454 (8.4°N, 85.5°E, 3721 m water depth) near the modern active channel and Site U1449 (8.4°N, 88.7°E, 3653 m water depth) far from channel activity. We compare these sites to single G. sacculifer from the core-top sample of Site 342KL (20.6°N, 90.1°E, 1256 m water depth) located on the continental shelf. Each foraminifera lives 2-4 weeks and the distribution of 60 to 80 data points reflects the seasonal range of SST and SSS at the location where the foraminifera calcified. Measurements in foraminifera from Site U1449 (away from active channel) are statistically different from the site in the northern Bay of Bengal and more consistent with local conditions. Conversely, foraminifera from the site near the active channel reflect a combined signal of local conditions recorded from the site far from channel activity and those recorded from the continental shelf. This suggests a portion of foraminifera from the active channel site have been

You say "lean finely textured beef," I say "pink slime".

PubMed

Reid, Rita-Marie Cain

2014-01-01

In 2012, American Broadcasting Companies, Inc. (ABC) broadcast a segment on its evening news show regarding the manufacture of "lean finely textured beef" by Beef Products, Inc. (BPI). The broadcast, as well as follow-up reports and social media communications, repeatedly referred to the product as "pink slime," a term originated by a United States Department of Agriculture (USDA) employee for the processed meat. The market backlash against the product was immediate and intense. Ultimately, BPI closed three processing plants, cut hundreds of jobs, and filed for bankruptcy. BPI sued ABC and others for food libel, defamation, and tortious interference. This research analyzes those claims and defenses and discusses the future of such cases.

Evidence of damage to pink salmon inhabiting Prince William Sound, Alaska, three generations after the Exxon Valdez oil spill

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bue, B.G.; Miller, G.D.; Seeb, J.E.

1995-12-31

Investigations into the environmental effects of the 1 989 Exxon Valdez oil spill lead us to conclude that chronic damage occurred in some pink salmon populations. Differences in survival between streams contaminated by oil and uncontaminated streams have been observed annually since the spill for pink salmon embryos incubating in the intertidal portions of Prince William Sound. The authors assessed the environmental influence on these findings by collecting gametes from both contaminated and uncontaminated streams, transporting them to a hatchery where intra-stream crosses were made, and incubating the resulting embryos under identical conditions. Lower survival was detected in the embryosmore » originating from the oil-contaminated streams indicating that the agent responsible for the differences detected in the field was genetic rather than environmental.« less

Complete Genome Sequence of Methylobacterium populi P-1M, Isolated from Pink-Pigmented Household Biofilm

PubMed Central

Morohoshi, Tomohiro

2016-01-01

Methylobacterium populi P-1M is isolated from the pink-pigmented household biofilm. Here, we present the complete genome sequence of P-1M, consisting of one chromosome of 5,705,640 bp and five plasmids of 64,864 bp, 59,879 bp, 42,569 bp, 41,417 bp, and 29,506 bp. PMID:27313289

The Tsunami Geology of the Bay of Bengal Shores and the Predecessors of the 2004 Indian Ocean Event

NASA Astrophysics Data System (ADS)

Rajendran, C.; Rajendran, K.; Seshachalam, S.; Andrade, V.

2010-12-01

The 2004 Aceh-Andaman earthquake exceeded the known Indian Ocean precedents by its 1,300-km long fault rupture and the height and reach of its tsunami. Literature of the ancient Chola dynasty (AD 9-11 centuries) of south India and the archeological excavations allude to a sea flood that crippled the historic port at Kaveripattinam, a trading hub for Southeast Asia. Here, we combine a variety of data from the rupture zone as well as the distant shores to build a tsunami history of the Bay of Bengal. A compelling set of geological proxies of possible tsunami inundation include boulder beds of Car Nicobar Island in the south and the East Island in the northernmost Andaman, a subsided fossil mangrove forest near Port Blair and a washover sedimentation identified in the Kaveripattinam coast of Tamil Nadu, south India. We have developed an extensive chronology for these geological proxies, and we analyze them in conjunction with the historical information culled from different sources for major sea surges along the Bay of Bengal shores. The age data and the depositional characteristics of these geological proxies suggest four major tsunamis in the last 2000 years in the Bay of Bengal, including the 1881 Car Nicobar tsunami. Among these, the evidence for the event of 800-1200 cal yr BP is fairly well represented on both sides of the Bay of Bengal shores. Thus, we surmise that the 800-1000-year old tsunami mimics the transoceanic reach of the 2004 Indian Ocean and the age constraints also agree with the sea surge during the Chola period. We also obtained clues for a possible medieval tsunami from the islands occurred probably a few hundred years after the Chola tsunami, but its size cannot constrained, nor its source. The convergence of ages and the multiplicity of sites would suggest at least one full size predecessor of the 2004 event 1000-800 years ago.

Obstetric care practice in Birbhum District, West Bengal, India.

PubMed

Bharati, Susmita; Pal, Manoranjan; Bharati, Premananda

2007-08-01

The study area is the Birbhum district of the State of West Bengal in India. It is one of the backward districts in India. The paper investigates the existing pattern of obstetric health care practices and the factors associated with the utilization of such care. The present analysis includes 495 adult married women of both rural and urban areas of nine Blocks of Birbhum district. Besides performing chi2 tests to see the association of the relevant individual and household characteristics, logistic regression was also carried out to measure the effect of these characteristics on the use of obstetric health care. In Birbhum district of West Bengal 65 percent mothers go to doctors for antenatal check-up during their pregnancy, but only 26 percent mothers deliver their babies in institutions and 30 percent mothers get the help of professional health assistants during delivery. Educated women have emphasized role in the practice of obstetric health care. Husband's education and the standard of living of the family also have some effect on the practice of antenatal check up, place of delivery and assistance of health professional. While most of the family background variables have significant effect on the practice of antenatal check up, these variables do not have much effect on the choice of delivery or seeking assistance of health professionals. Contrary to the popular belief the working status of women does not have favourable influence on the obstetric health care practices. In developing countries like India, it is the poverty, which compels the women to take jobs-that too in low paid jobs especially in rural backward areas. The status of literacy of mothers and standard of living of the family are of prime importance in improving the obstetric health care practices.

Pink1 and Parkin regulate Drosophila intestinal stem cell proliferation during stress and aging.

PubMed

Koehler, Christopher L; Perkins, Guy A; Ellisman, Mark H; Jones, D Leanne

2017-08-07

Intestinal stem cells (ISCs) maintain the midgut epithelium in Drosophila melanogaster Proper cellular turnover and tissue function rely on tightly regulated rates of ISC division and appropriate differentiation of daughter cells. However, aging and epithelial injury cause elevated ISC proliferation and decreased capacity for terminal differentiation of daughter enteroblasts (EBs). The mechanisms causing functional decline of stem cells with age remain elusive; however, recent findings suggest that stem cell metabolism plays an important role in the regulation of stem cell activity. Here, we investigate how alterations in mitochondrial homeostasis modulate stem cell behavior in vivo via RNA interference-mediated knockdown of factors involved in mitochondrial dynamics. ISC/EB-specific knockdown of the mitophagy-related genes Pink1 or Parkin suppresses the age-related loss of tissue homeostasis, despite dramatic changes in mitochondrial ultrastructure and mitochondrial damage in ISCs/EBs. Maintenance of tissue homeostasis upon reduction of Pink1 or Parkin appears to result from reduction of age- and stress-induced ISC proliferation, in part, through induction of ISC senescence. Our results indicate an uncoupling of cellular, tissue, and organismal aging through inhibition of ISC proliferation and provide insight into strategies used by stem cells to maintain tissue homeostasis despite severe damage to organelles. © 2017 Koehler et al.

Field evaluation of two systemic neonicotinoid insecticides against pink hibiscus mealybug (Maconellicoccus hirsutus (Green))on mulberry trees

USDA-ARS?s Scientific Manuscript database

Infestations of the pink hibiscus mealybug, Maconellicoccus hirsutus (Green), in ornamental trees were already in an advanced state at the time of its discovery in the Imperial Valley of California (USA) in August 1999. Concern about the spread of M. hirsutus beyond the Imperial Valley led to the p...

Comparisons between data assimilated HYCOM output and in situ Argo measurements in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Wilson, E. A.; Riser, S.

2014-12-01

This study evaluates the performance of data assimilated Hybrid Coordinate Ocean Model (HYCOM) output for the Bay of Bengal from September 2008 through July 2013. We find that while HYCOM assimilates Argo data, the model still suffers from significant temperature and salinity biases in this region. These biases are most severe in the northern Bay of Bengal, where the model tends to be too saline near the surface and too fresh at depth. The maximum magnitude of these biases is approximately 0.6 PSS. We also find that the model's salinity biases have a distinct seasonal cycle. The most problematic periods are the months following the summer monsoon (Oct-Jan). HYCOM's near surface temperature estimates compare more favorably with Argo, but significant errors exist at deeper levels. We argue that optimal interpolation will tend to induce positive salinity biases in the northern regions of the Bay. Further, we speculate that these biases are introduced when the model relaxes to climatology and assimilates real-time data.

Mucocutaneous features of Chikungunya fever: a study from an outbreak in West Bengal, India.

PubMed

Bandyopadhyay, Debabrata; Ghosh, Sudip Kumar

2008-11-01

Chikungunya fever (CF) epidemic has recently re-emerged in India on a large scale affecting many parts of the country. We have reviewed the mucocutaneous manifestations of the disease in a number of cases. Twenty six serologically proven cases of CF with rash from the district of 24-Paraganas (North) in the eastern Indian state of West Bengal were subjected to detailed clinical study to investigate the chronology and evolution of mucocutaneous lesions, the type and distribution of the rash, and systemic changes. Most patients were in their 3rd and 4th decade (23% each). Males and females were equally affected. Most patients developed the rash concomitantly with the onset or during the febrile illness, but 5 (19.2%) developed rash after defervescence. Most (57.7%) patients developed rash within the first 2 days of fever. The upper limb was the most common site of first appearance of lesions. Morbilliform eruption was the most common type of lesion noted, followed by scaling, macular erythema, intertrigo, hypermelanosis, xerosis, excoriated papules, urticaria and petechial spots. Cutaneous lesions were generally asymptomatic but 5 (19.2%) patients had intense pruritus. Mucosal lesions were found in 4 (15.4%) patients. Moderate to marked joint involvement was universal. CF exanthem may have varying morphology. Since the disease is spreading widely in different parts of the world, it should be considered in the differential diagnosis of any acute febrile arthropathy with rash.

Mark-recapture with multiple, non-invasive marks.

PubMed

Bonner, Simon J; Holmberg, Jason

2013-09-01

Non-invasive marks, including pigmentation patterns, acquired scars, and genetic markers, are often used to identify individuals in mark-recapture experiments. If animals in a population can be identified from multiple, non-invasive marks then some individuals may be counted twice in the observed data. Analyzing the observed histories without accounting for these errors will provide incorrect inference about the population dynamics. Previous approaches to this problem include modeling data from only one mark and combining estimators obtained from each mark separately assuming that they are independent. Motivated by the analysis of data from the ECOCEAN online whale shark (Rhincodon typus) catalog, we describe a Bayesian method to analyze data from multiple, non-invasive marks that is based on the latent-multinomial model of Link et al. (2010, Biometrics 66, 178-185). Further to this, we describe a simplification of the Markov chain Monte Carlo algorithm of Link et al. (2010, Biometrics 66, 178-185) that leads to more efficient computation. We present results from the analysis of the ECOCEAN whale shark data and from simulation studies comparing our method with the previous approaches. © 2013, The International Biometric Society.

Prevalence of Tinea capitis in school going children in Kolkata, West Bengal.

PubMed

Kundu, D; Mandal, L; Sen, G

2012-07-01

In recent years the incidence of Tinea capitis, infection of scalp by dermatophytes, has increased in United Kingdom and North America. The trend may be similar in India. The objective of this study is to find the prevalence of Tinea capitis in school going urban children in Kolkata, West Bengal state. The present study is a cross-sectional study conducted in a government higher primary school in Kolkata. Totally 505 students were screened and 52 were diagnosed to have Tinea capitis by clinical examination, giving a prevalence rate of 10% among school children. Prevalence rates among the age groups of 6-8, 9-11 and 12-14 years were almost the same, ranging from 9 to 11%. The prevalence rate was significantly high among the boys (14%). There was no significant difference in prevalence of infection among coconut oil users and castor oil users. Measures of general hygiene were similar among those who were infected with Tinea capitis and those who were not. The commonest clinical type of infection found was dull grey patches. Itching with hair loss was the major symptom and most of the infected children had cervical lymphadenopathy. The potassium hydroxide studies revealed endothrix spores in majority of samples. Tinea capitis in prevalent in school going urban children in Kolkata, West Bengal state and necessary measures must be undertaken to curtail this incidence.

Intense Convective Activity Over Northern Bay of Bengal during Late Southwest Monsoon

NASA Astrophysics Data System (ADS)

Mathew, S.; Venkatesan, R.; Natesan, U.; G, L.

2016-02-01

Warming of the northern Bay of Bengal during late southwest monsoon was very much influenced by the intensity of freshening by river discharges. The inter-annual variability of freshening and associated warming was analyzed for 2011 to 2015, with the help of in-situ data obtained from the moored buoys deployed at specific locations in northern Bay of Bengal. The shoaling of mixed layer depth associated with the advection of freshwaters has favored intense warming and supported convective activity thereby. The year 2011 recorded highest freshening with salinity touched as low as 21.3 p.s.u.; with the heavy river discharges, resulted from intense rainfall over catchment areas of rivers that discharged into the bay, due to positive Indian Ocean Dipole and La-Nina affect. It has resulted in intense warming of the surface temperature by 2°C, which persisted for nearly three weeks. The year 2014 was least fresh, with no signature of freshening and associated warming. The latent heat flux term computed from the moored buoy using the COARE 3.5 algorithm showed increased loss of latent heat flux during the late monsoon associated with the warming. It directly supported increased convective activity and delayed the withdrawal of monsoon activity from Indian sub-continent. Two depressions with intense convective activity formed over bay during September of 2011 which delayed the withdrawal of monsoon by three weeks.

Anisocoria Secondary to Anticholinergic Mydriasis from Homeopathic Pink Eye Relief Drops.

PubMed

Chen, Lin; Yeung, Joseph C; Anderson, Dennis R

2017-12-01

A woman, aged 70 years, developed anisocoria after applying homeopathic eye drops (Similasan Pink Eye Relief) to her left eye. Her pupil was dilated for two weeks and did not respond to light or near stimuli for one week. Both 0.1% and 1% pilocarpine failed to constrict her left pupil, and magnetic resonance imaging of her brain did not reveal any abnormality. The eye drops she had used contain belladonna extracts which have a natural atropine component. This case demonstrates the importance, when evaluating a patient presenting with anisocoria, of knowing the chemical ingredients of the homeopathic eye drops, which often are not listed. © 2017 Marshfield Clinic.

Controls on groundwater flow in the Bengal Basin of India and Bangladesh: Regional modeling analysis

USGS Publications Warehouse

Michael, H.A.; Voss, C.I.

2009-01-01

Groundwater for domestic and irrigation purposes is produced primarily from shallow parts of the Bengal Basin aquifer system (India and Bangladesh), which contains high concentrations of dissolved arsenic (exceeding worldwide drinking water standards), though deeper groundwater is generally low in arsenic. An essential first step for determining sustainable management of the deep groundwater resource is identification of hydrogeologic controls on flow and quantification of basin-scale groundwater flow patterns. Results from groundwater modeling, in which the Bengal Basin aquifer system is represented as a single aquifer with higher horizontal than vertical hydraulic conductivity, indicate that this anisotropy is the primary hydrogeologic control on the natural flowpath lengths. Despite extremely low hydraulic gradients due to minimal topographic relief, anisotropy implies large-scale (tens to hundreds of kilometers) flow at depth. Other hydrogeologic factors, including lateral and vertical changes in hydraulic conductivity, have minor effects on overall flow patterns. However, because natural hydraulic gradients are low, the impact of pumping on groundwater flow is overwhelming; modeling indicates that pumping has substantially changed the shallow groundwater budget and flowpaths from predevelopment conditions. ?? Springer-Verlag 2009.

Controls on groundwater flow in the Bengal Basin of India and Bangladesh: regional modeling analysis

NASA Astrophysics Data System (ADS)

Michael, Holly A.; Voss, Clifford I.

2009-11-01

Groundwater for domestic and irrigation purposes is produced primarily from shallow parts of the Bengal Basin aquifer system (India and Bangladesh), which contains high concentrations of dissolved arsenic (exceeding worldwide drinking water standards), though deeper groundwater is generally low in arsenic. An essential first step for determining sustainable management of the deep groundwater resource is identification of hydrogeologic controls on flow and quantification of basin-scale groundwater flow patterns. Results from groundwater modeling, in which the Bengal Basin aquifer system is represented as a single aquifer with higher horizontal than vertical hydraulic conductivity, indicate that this anisotropy is the primary hydrogeologic control on the natural flowpath lengths. Despite extremely low hydraulic gradients due to minimal topographic relief, anisotropy implies large-scale (tens to hundreds of kilometers) flow at depth. Other hydrogeologic factors, including lateral and vertical changes in hydraulic conductivity, have minor effects on overall flow patterns. However, because natural hydraulic gradients are low, the impact of pumping on groundwater flow is overwhelming; modeling indicates that pumping has substantially changed the shallow groundwater budget and flowpaths from predevelopment conditions.

The EDTA effect on phytoextraction of single and combined metals-contaminated soils using rainbow pink (Dianthus chinensis).

PubMed

Lai, Hung-Yu; Chen, Zueng-Sang

2005-08-01

Rainbow pink (Dianthus chinensis), a potential phytoextraction plant, can accumulate high concentrations of Cd from metal-contaminated soils. The soils used in this study were artificially added with different metals including (1) CK: original soil, (2) Cd-treated soil: 10 mg Cd kg(-1), (3) Zn-treated soil: 100 mg Zn kg(-1), (4) Pb-treated soil: 1000 mg Pb kg(-1), (5) Cd-Zn-treated soil: 10 mg Cd kg(-1) and 100 mg Zn kg(-1), (6) Cd-Pb-treated soil: 10 mg Cd kg(-1) and 1000 mg Pb kg(-1), (7) Zn-Pb-treated soil: 100 mg Zn kg(-1) and 1000 mg Pb kg(-1), and (8) Cd-Zn-Pb-treated soil: 10 mg Cd kg(-1), 100 mg Zn kg(-1), and 1000 mg Pb kg(-1). Three concentrations of 2Na-EDTA solutions (0 (control), 2, and 5 mmol kg(-1) soil) were added to the different metals-treated soils to study the influence of applied EDTA on single and combined metals-contaminated soils phytoextraction using rainbow pink. The results showed that the Cd, Zn, Pb, Fe, or Mn concentrations in different metals-treated soil solutions significantly increased after applying 5 mmol EDTA kg(-1) (p<0.05). The metal concentrations in different metals-treated soils extracted by deionized water also significantly increased after applying 5 mmol EDTA kg(-1) (p<0.05). Because of the high extraction capacity of both 0.005 M DTPA (pH 5.3) and 0.05 M EDTA (pH 7.0), applying EDTA did not significantly increase the Cd, Zn, or Pb concentration in both extracts for most of the treatments. Applying EDTA solutions can significantly increase the Cd and Pb concentrations in the shoots of rainbow pink (p<0.05). However, this was not statistically significant for Zn because of the low Zn concentration added into the contaminated soils. The results from this study indicate that applying 5 mmol EDTA kg(-1) can significantly increase the Cd, Zn, or Pb concentrations both in the soil solution or extracted using deionized water in single or combined metals-contaminated soils, thus increasing the accumulated metals concentrations in

Complete Genome Sequence of Methylobacterium populi P-1M, Isolated from Pink-Pigmented Household Biofilm.

PubMed

Morohoshi, Tomohiro; Ikeda, Tsukasa

2016-06-16

Methylobacterium populi P-1M is isolated from the pink-pigmented household biofilm. Here, we present the complete genome sequence of P-1M, consisting of one chromosome of 5,705,640 bp and five plasmids of 64,864 bp, 59,879 bp, 42,569 bp, 41,417 bp, and 29,506 bp. Copyright © 2016 Morohoshi and Ikeda.

The threat from sea and land. Regional report 2: the Bay of Bengal.

PubMed

1994-01-01

This article reports on the environmental threat caused by the Bay of Bengal on the economic situation in Bangladesh and India. More than four-fifths of Bangladesh amount to an extended delta at the confluence of one of the largest river systems in the world, comprising the Ganges, Brahmaputra, and Meghna. In the Brahmaputra watershed, the rate of deforestation caused soil erosion in the Himalayas is five times as much as in the geological past. This sediment loading is often considered to be a prime factor in downstream flooding. Because of this, Bangladesh agriculture products were damaged, which led to economic instability. Furthermore, as a result of the combined impacts of population growth, poverty, no land, and inadequate food supplies, many migrated into the neighboring Indian areas. Moreover, the susceptibility of the Bay of Bengal to cyclones has caused a great number of deaths leaving millions of people homeless. Cyclone episodes are expected to be more frequent as global warming continues. Furthermore, Bangladesh was estimated to be only 5 meters above sea level, which is considered vulnerable to sea level rise. On top of these problems, trouble from the other side of Bangladesh was also predicted with the combined outflow of the Ganges, Brahmaputra, and Meghna leading to more national damage.

The development of mental hospitals in West Bengal: A brief history and changing trends.

PubMed

Bhattacharyya, Ranjan

2018-02-01

The communication between G. S Bose and Sigmund Freud is a well-documented fact, and philosophical blend of rich cultural experiences is unique to modification of traditional psychoanalysis in the context of development of psychiatry in West Bengal. The Calcutta lunatic asylum was established at Bhowanipore, and first general hospital psychiatric unit was formed at R. G. Kar Medical College, Calcutta. Prof. Ajita Chakraborty was a pioneer to describe her struggling days in the early career and shared her views with experiences in her autobiography. The volume and quality of research work, especially in the field of epidemiology led by Dr. D. N. Nandi is worth mentioning. A jail had been converted to mental hospital which is the largest in terms of bed strength ( n = 350) at Berhampore, Murshidabad district where Kazi Nazrul Islam and Netaji Subhas Chandra Bose had spent some period as prisoner during British rules. Bankura was the first district in West Bengal to start District Mental Health program. The various nongovernmental organizations are working together in public-private partnership model or indigenous ways in tandem over years for the betterment of mental health services both at institutional and community level.

Assessment of trophic transfer of benzo(a)pyrene genotoxicity from the post-larval pink shrimp F. brasiliensis to the juvenile Florida pompano T. carolinus.

PubMed

Rocha, Arthur José da Silva; Santos, Thaís Cruz Alves; Gomes, Vicente; Bícego, Márcia Caruso; Barbosa, Ana Cecília Rizzatti de Albergaria; Passos, Maria José de Arruda Campos Rocha; Hasue, Fabio Matsu; Van Ngan, Phan

2012-11-01

In the present study, the polycyclic aromatic hydrocarbon (PAH) genotoxicity was investigated in a one-step predator-prey relationship with the trophic-related marine species. Florida pompanos were fed for 5 and 10 days with pink shrimp post larvae previously exposed to benzo(a)pyrene (BaP) concentrations. Parent BaP body burden was measured in samples of Farfantepenaeus brasiliensis. BaP metabolites were determined in bile samples of Trachinotus carolinus and DNA damage was assessed through the comet and erythrocyte nuclear abnormalities (ENAs) assays in fish erythrocytes. BaP body burden increased significantly with the PAH concentration in pink shrimp PLs as well as the fish bile BaP metabolites. Both, comet and ENAs assays indicated significant increase on erythrocyte DNA damage of Florida pompanos fed with BaP-exposed pink shrimp on both feeding periods. The trophic route of BaP genotoxicity is discussed as well as the PAH biotransformation as the inducing mechanism for the DNA damages observed. Copyright © 2012 Elsevier B.V. All rights reserved.

Growth kinetics and efficacy as parameters for ranking and selecting biocontrol agents that reduce pink rot in stored potatoes

USDA-ARS?s Scientific Manuscript database

Increased production of organic agricultural products and the relative ineffectiveness of traditional control measures support development of new biocontrol technologies for use against pink rot infections in storage. The microbiota of 84 different agricultural soils was individually transferred to...

Source of marine turbidites on the Andaman-Nicobar Islands: Nicobar Fan, Bengal Fan or paleo-Irrawaddy?

NASA Astrophysics Data System (ADS)

Carter, A.

2017-12-01

Marine turbidites from an axially fed submarine fan are intermittently exposed across the entire chain of the Andaman-Nicobar Islands. Known as the Andaman Flysch (AF) and loosely assigned to the Paleogene, it has been proposed that these rocks are sourced from the Himalaya and thus provide a unique window into early stages of orogenesis. Where the turbidites came from has been subject to debate; they are either Bengal Fan or forearc deposits cut off from the Bengal Fan and possibly sourced from the Irrawaddy delta. Following recent IODP drilling in the eastern Indian Ocean (Expeditions 354 and 362) it is now possible resolve this by comparing the provenance of AF turbidites with the Bengal and Nicobar Fans. The Andaman Flysch can be traced as detached outcrops all along the western side of the main islands of Andaman over a strike length of more than 200 km. Exposures along the east coast are confined to South Andaman Island. Petrographic and geochemical data show a common continental crust signal with minor contributions from arc material. But, there are also differences whereby west coast sandstones show significantly higher quartz content and less feldspars and rock fragments. Staurolite is also present in all samples from the western side, but is absent from east coast samples. Both detrital zircon U-Pb and Bulk rock Nd data record the presence of arc material likely from Myanmar. Detrital zircon data from the Nicobar Fan match the Andaman turbidites and indicate sources from the Greater and Tethyan Himalaya mixed with sediment from the Burmese arc. Transfer of Irrawaddy derived sediment to the Nicobar Fan is ruled out as sediment transfer across the fore-arc to the west was restricted by the then exposed Yadana and M8 highs in the north and the Sewell and Alcock Rises to the south. Sediment isopachs of the Martaban back arc basin, the main north-south-oriented depocentre in the Andaman Sea related to the development of the Thanlwin -Irrawaddy delta system

Quantification of tidally-influenced seasonal groundwater discharge to the Bay of Bengal by seepage meter study

NASA Astrophysics Data System (ADS)

Debnath, Palash; Mukherjee, Abhijit

2016-06-01

Submarine groundwater discharges (SGD) play a major role in solute transport and nutrient flux to the ocean. We have conducted a spatio-temporal high-resolution lunar-tidal cycle-scale seepage meter experiment during pre-monsoon and post-monsoon seasons, to quantify the spatio-temporal patterns and variability of SGD, its terrestrial (T-SGD) and marine components (M-SGD). The measured daily average SGD rates range from no discharge to 3.6 m3 m-2 d-1 during pre-monsoon season and 0.08-5.9 m3 m-2 d-1 during post-monsoon seasons, depending on the tidal pattern. The uncertainty for SGD measurement is calculated as ±0.8% to ±11% for pre-monsoon and ±1.8% to ±17% for post-monsoon respectively. A linear, inverse relationship was observed between the calculated T-SGD and M-SGD components, which varied along the distance from the coast and position in the tidal-cycle, spatial and temporal (daily) variations of seepage rates within the lunar tidal cycle period distinctly demonstrate the influence of tides on groundwater seepage rate. As an instance, for the identification of the bulk discharge location, the centroid of the integrated SGD rate has been calculated and found to be near 20 m offshore area. The average discharge rate per unit area further extrapolated to total SGD fluxes to the Bay of Bengal from eastern Indian coast by extrapolation of the annual and seasonal fluxes observed in the study area, which are first direct/experimental estimate of SGD to the Bay of Bengal. Approximations suggest that in present-day condition, total average annual SGD to the Bay of Bengal is about 8.98 ± 0.6 × 108 m3/y. This is suggested that the SGD input to the ocean through the Bay of Bengal is approximately 0.9% of the global input from the inter-tidal zone and that has an implication on the mass balance of discharging solutes/nutrients to the global oceans. High T-SGD input is observed for all season, which is largest toward landward direction from the delineated saltwater

Bioenergetic model estimates of interannual and spatial patterns in consumption demand and growth potential of juvenile pink salmon ( Oncorhynchus gorbuscha) in the Gulf of Alaska

NASA Astrophysics Data System (ADS)

Moss, Jamal H.; Beauchamp, David A.; Cross, Alison D.; Farley, Edward V.; Murphy, James M.; Helle, John H.; Walker, Robert V.; Myers, Katherine W.

2009-12-01

A bioenergetic model of juvenile pink salmon ( Oncorhynchus gorbuscha) was used to estimate daily prey consumption and growth potential of four ocean habitats in the Gulf of Alaska during 2001 and 2002. Growth potential was not significantly higher in 2002 than in 2001 at an alpha level of 0.05 ( P=0.073). Average differences in growth potential across habitats were minimal (slope habitat=0.844 g d -1, shelf habitat=0.806 g d -1, offshore habitat=0.820 g d -1, and nearshore habitat=0.703 g d -1) and not significantly different ( P=0.630). Consumption demand differed significantly between hatchery and wild stocks ( P=0.035) when examined within year due to the interaction between hatchery verses wild origin and year. However, the overall effect of origin across years was not significant ( P=0.705) due to similar total amounts of prey consumed by all juvenile pink salmon in both study years. We anticipated that years in which ocean survival was high would have had high growth potential, but this relationship did not prove to be true. Therefore, modeled growth potential may not be useful as a tool for forecasting survival of Prince William Sound hatchery pink salmon stocks. Significant differences in consumption demand and a two-fold difference in nearshore abundance during 2001 of hatchery and wild pink salmon confirmed the existence of strong and variable interannual competition and the importance of the nearshore region as being a potential competitive bottleneck.

Bioenergetic model estimates of interannual and spatial patterns in consumption demand and growth potential of juvenile pink salmon (Oncorhynchus gorbuscha) in the Gulf of Alaska

USGS Publications Warehouse

Moss, J.H.; Beauchamp, D.A.; Cross, A.D.; Farley, E.V.; Murphy, J.M.; Helle, J.H.; Walker, R.V.; Myers, K.W.

2009-01-01

A bioenergetic model of juvenile pink salmon (Oncorhynchus gorbuscha) was used to estimate daily prey consumption and growth potential of four ocean habitats in the Gulf of Alaska during 2001 and 2002. Growth potential was not significantly higher in 2002 than in 2001 at an alpha level of 0.05 (P=0.073). Average differences in growth potential across habitats were minimal (slope habitat=0.844 g d-1, shelf habitat=0.806 g d-1, offshore habitat=0.820 g d-1, and nearshore habitat=0.703 g d-1) and not significantly different (P=0.630). Consumption demand differed significantly between hatchery and wild stocks (P=0.035) when examined within year due to the interaction between hatchery verses wild origin and year. However, the overall effect of origin across years was not significant (P=0.705) due to similar total amounts of prey consumed by all juvenile pink salmon in both study years. We anticipated that years in which ocean survival was high would have had high growth potential, but this relationship did not prove to be true. Therefore, modeled growth potential may not be useful as a tool for forecasting survival of Prince William Sound hatchery pink salmon stocks. Significant differences in consumption demand and a two-fold difference in nearshore abundance during 2001 of hatchery and wild pink salmon confirmed the existence of strong and variable interannual competition and the importance of the nearshore region as being a potential competitive bottleneck.

Coded wire tag recoveries from pink salmon in Prince William sound salmon fisheries, 1993. Restoration project 93067. Exxon Valdez oil spill restoration project final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sharr, S.; Peckham, C.J.; Sharp, D.G.

1995-11-01

Coded wire tags applied to pink salmon fry in 1992 at four hatcheries in Prince William Sound were recovered in the commercial catch of 1993 and used to provide inseason estimates of hatchery contributions. These estimates were used by fishery managers to target the numerically superior hatchery returns, and reduce the pressure on oil-damaged wild stocks. Inseason estimates were made in two stages. The postseason analysis revealed that of a catch of 3.51 million pink salmon, 1.12 million were estimated to be of wild origin.

Methylobacterium suomiense sp. nov. and Methylobacterium lusitanum sp. nov., aerobic, pink-pigmented, facultatively methylotrophic bacteria.

PubMed

Doronina, Nina V; Trotsenko, Yuri A; Kuznetsov, Boris B; Tourova, Tatjana P; Salkinoja-Salonen, Mirja S

2002-05-01

Two aerobic, pink-pigmented, facultatively methylotrophic bacteria, strains F20T and RXM(T), are described taxonomically. On the basis of their phenotypic and genotypic properties, the isolates are proposed as novel species of the genus Methylobacterium, Methylobacterium suomiense sp. nov. (type strain F20T = VKM B-2238T = NCIMB 13778T) and Methylobacterium lusitanum sp. nov. (type strain RXMT = VKM B-2239T = NCIMB 13779T).

The pink gene encodes the Drosophila orthologue of the human Hermansky-Pudlak syndrome 5 (HPS5) gene.

PubMed

Syrzycka, Monika; McEachern, Lori A; Kinneard, Jennifer; Prabhu, Kristel; Fitzpatrick, Kathleen; Schulze, Sandra; Rawls, John M; Lloyd, Vett K; Sinclair, Donald A R; Honda, Barry M

2007-06-01

Hermansky-Pudlak syndrome (HPS) consists of a set of human autosomal recessive disorders, with symptoms resulting from defects in genes required for protein trafficking in lysosome-related organelles such as melanosomes and platelet dense granules. A number of human HPS genes and rodent orthologues have been identified whose protein products are key components of 1 of 4 different protein complexes (AP-3 or BLOC-1, -2, and -3) that are key participants in the process. Drosophila melanogaster has been a key model organism in demonstrating the in vivo significance of many genes involved in protein trafficking pathways; for example, mutations in the "granule group" genes lead to changes in eye colour arising from improper protein trafficking to pigment granules in the developing eye. An examination of the chromosomal positioning of Drosophila HPS gene orthologues suggested that CG9770, the Drosophila HPS5 orthologue, might correspond to the pink locus. Here we confirm this gene assignment, making pink the first eye colour gene in flies to be identified as a BLOC complex gene.

Eicosapentaenoic and docosahexaenoic acids enriched polyunsaturated fatty acids from the coastal marine fish of Bay of Bengal and their therapeutic value.

PubMed

Bera, Rabindranath; Dhara, Tushar K; Bhadra, Ranjan; Majumder, Gopal C; Sen, Parimal C

2010-12-01

Eicosapentaenoic acid (EPA)/docosahexaenoic acid (DHA) enriched polyunsaturated fatty acids (PUFA) significantly present in marine fish oil emerge as preventive agents for combating many health problems specially in chronic or metabolic disorders. The fish in the coastal area of Bay of Bengal has remained unexplored with respect to EPA/DHA enriched PUFA content in its oils, although it may be a potential source in harnessing the health benefit. In this study, seven varieties of the coastal fish were analysed for the content of EPA/DHA. The one locally known as lotte, (Harpadon nehereus) though has low content of total lipids, was found to have high EPA/DHA in its oil. The phospholipids rich fraction was extracted from the total fish oil. The EPA/DHA enriched PUFA was isolated to investigate the potential use for health benefits. EPA/DHA is found to act as protective agent against mercury poisoning studied in cell culture as well as in animal mode. It is found to be highly preventive in diabetes. The lotte is available in the coastal area of Bay of Bengal adjoining West Bengal, India in large scale and it is the first report showing EPA/DHA enriched PUFA in these fish oil that can be availed to harness in important health benefits.

A resource management scenario for traditional and scientific management of pink shrimp (Farfantepenaeus paulensis) in the Patos Lagoon estuary (RS), Brazil

PubMed Central

2013-01-01

Background This article aims to discuss the incorporation of traditional time in the construction of a management scenario for pink shrimp in the Patos Lagoon estuary (RS), Brazil. To meet this objective, two procedures have been adopted; one at a conceptual level and another at a methodological level. At the conceptual level, the concept of traditional time as a form of traditional ecological knowledge (TEK) was adopted. Method At the methodological level, we conduct a wide literature review of the scientific knowledge (SK) that guides recommendations for pink shrimp management by restricting the fishing season in the Patos Lagoon estuary; in addition, we review the ethno-scientific literature which describes traditional calendars as a management base for artisanal fishers in the Patos Lagoon estuary. Results Results demonstrate that TEK and SK describe similar estuarine biological processes, but are incommensurable at a resource management level. On the other hand, the construction of a “management scenario” for pink shrimp is possible through the development of “criteria for hierarchies of validity” which arise from a productive dialog between SK and TEK. Conclusions The commensurable and the incommensurable levels reveal different basis of time-space perceptions between traditional ecological knowledge and scientific knowledge. Despite incommensurability at the management level, it is possible to establish guidelines for the construction of “management scenarios” and to support a co-management process. PMID:23311826

The influence of EDTA application on the interactions of cadmium, zinc, and lead and their uptake of rainbow pink (Dianthus chinensis).

PubMed

Lai, Hung-Yu; Chen, Zueng-Sang

2006-10-11

Soil used in this study was artificially contaminated with Cd, Zn, Pb, or applied in combinations (Cd-Zn, Cd-Pb, Zn-Pb, or Cd-Zn-Pb) to study the interactions of metals in soil contaminated with multiple metals. After planting rainbow pink (Dianthus chinensis) in these soils for 21 days, three different concentrations of ethylenedinitrilotetraacetic acid (EDTA) solutions were added to study the effect of applying EDTA on the interactions among these metals. The concentrations of Cd, Zn, and Pb in the soil solutions of different metals-treated soils increased significantly after applying 5 mmol EDTA kg(-1) soil (p<0.05). The potential of groundwater contamination will increase after applying EDTA and it is not recommended to be in situ used or have to use very carefully. The existence of Pb in the Cd-contaminated soil enhanced the uptake of Cd in rainbow pink in the treatments of control and 2 mmol EDTA kg(-1) soil. Cadmium inhibited the concentration of Zn without applying EDTA. However, whether the application of EDTA or not and the applied EDTA concentration had the greatest effect on the uptake of Pb when compared to Cd and Zn. After applying 5 mmol EDTA kg(-1) soil, Cd or Zn in the Pb-contaminated soil inhibited the uptake of Pb in rainbow pink, but there were no effect in other treatments.

Mark-resight abundance estimation under incomplete identification of marked individuals

USGS Publications Warehouse

McClintock, Brett T.; Hill, Jason M.; Fritz, Lowell; Chumbley, Kathryn; Luxa, Katie; Diefenbach, Duane R.

2014-01-01

Often less expensive and less invasive than conventional mark–recapture, so-called 'mark-resight' methods are popular in the estimation of population abundance. These methods are most often applied when a subset of the population of interest is marked (naturally or artificially), and non-invasive sighting data can be simultaneously collected for both marked and unmarked individuals. However, it can often be difficult to identify marked individuals with certainty during resighting surveys, and incomplete identification of marked individuals is potentially a major source of bias in mark-resight abundance estimators. Previously proposed solutions are ad hoc and will tend to underperform unless marked individual identification rates are relatively high (>90%) or individual sighting heterogeneity is negligible.Based on a complete data likelihood, we present an approach that properly accounts for uncertainty in marked individual detection histories when incomplete identifications occur. The models allow for individual heterogeneity in detection, sampling with (e.g. Poisson) or without (e.g. Bernoulli) replacement, and an unknown number of marked individuals. Using a custom Markov chain Monte Carlo algorithm to facilitate Bayesian inference, we demonstrate these models using two example data sets and investigate their properties via simulation experiments.We estimate abundance for grassland sparrow populations in Pennsylvania, USA when sampling was conducted with replacement and the number of marked individuals was either known or unknown. To increase marked individual identification probabilities, extensive territory mapping was used to assign incomplete identifications to individuals based on location. Despite marked individual identification probabilities as low as 67% in the absence of this territorial mapping procedure, we generally found little return (or need) for this time-consuming investment when using our proposed approach. We also estimate rookery abundance

Variability in productivity controlled by haline stratification over 300ky in the Bay of Bengal.

NASA Astrophysics Data System (ADS)

Da Silva, R.; Mazumdar, A.; Peketi, A.; Joshi, R.; Shaji, A.; Naik, B. G.; Carvalho, M.; Molleti, S.

2017-12-01

The unique hydrographic setting of the Bay of Bengal (BoB) makes it an ideal tropical marine system to study the influence of regional and global forcings on productivity and [CO2aq] through the late quaternary. Enormous fresh water flux into the BoB and consequent haline stratification significantly weakens the convective mixing and wind driven processes which are commonly responsible for transport of nutrients to the euphotic zone driving primary productivity. Here, we present a high resolution organic carbon-Calcium carbonate burial flux and δ13CTOC records for the last 300 ky. A giant Calypso piston corer was used on board ORV Marion Dufresne (MD-161) for the retrieval of the sediment core MD161-19 (core length: 39 m) off Mahanadi Basin (Lat.:18º59.1020"; Long.:85º41.1669") in western BoB at a water depth of 1480m. The results show significant productivity variation at marine isotope sub-stages and millennial timescales. Colder sub-stages and stadials (Dansgard-Oeschger cycle) show boost in productivity which may be attributed to thinning of low salinity water cap, thereby facilitating efficient nutrient transport across the euphotic zone by the combination of wind driven processes (entrainment and upwelling), convective mixing and cold core eddies. Our long term high resolution data indicates a possibility of marked changes in productivity/ biogeochemistry of BOB in the future due to global warming, in turn affecting coastal economy.

Cetacean Community Ecology in the Waters of Sri Lanka and the Bay of Bengal

DTIC Science & Technology

2015-09-30

1 DISTRIBUTION STATEMENT A. Approved for public release; distribution is unlimited. Cetacean Community Ecology in the Waters of Sri Lanka ...evidence that a sub-population of blue whales in the waters of Sri Lanka (Alling et al. 2 1991, Branch et al. 2007) may be year-round residents...Oceans. OBJECTIVES We hypothesize that the cetacean community of the oceanic Bay of Bengal and the waters of Sri Lanka varies with seasonal

An assessment of rural health care delivery system in some areas of West Bengal-an overview.

PubMed

Ray, Sandip Kumar; Basu, Subhra S; Basu, Amal Kumar

2011-01-01

A cross sectional observational study was carried out in three districts of West Bengal by following observational, quantitative and qualitative methods during July to December 2006 to find out the extent of utilization, strengths, weaknesses and gap as well as suggest recommendations in connection with health care delivery system for the state of West Bengal, India. A total of 672 episodes of illnesses were reported (2 weeks recall) by the study population of the three selected districts in three geographically separated divisions of West Bengal. None did seek care from any health facilities for treatment in case of 221 (32.89%) episodes; especially from tribal areas where in case of 76.19% none sought any health care from any facilities depended on their home remedies. In rest of episodes the (451), majority preferred government health facilities (38.58%), followed by Unqualified quacks (29.27%) due to low cost as well as living in close proximity, 27.27% preferred qualified Private practitioners and only 4.88% preferred AYUSH, as a first choice. Referral was mostly by self or by close relatives/families (61%) and not by a doctor. Awareness is required to avoid unnecessary referral. Cleanliness of the premises, face-lift, and clean toilet with privacy and availability of safe drinking water facilities could have an improved client satisfaction in rural health care delivery systems. This could be achieved through community participation with the involvement of PRI. However, as observed in the study RCH services including Family Planning as well as immunization services (preventive services) were utilized much better while there was a strong need of improvement of Post Natal Care, otherwise, Neonatal and Maternal mortality and morbidity will continue to be high.

Identification and growth characteristics of pink pigmented oxidative bacteria, Methylobacterium mesophilicum and biovars isolated from chlorinated and raw water supplies.

PubMed

O'Brien, J R; Murphy, J M

1993-01-01

Pink pigmented bacteria were isolated from a blood bank water purification unit, a municipal town water supply (tap water), and an island (untreated) ground water source. A total of thirteen strains including two reference strains of pink pigmented bacteria were compared in a numerical phenotypic study using 119 binary characters. Three clusters were derived, one major cluster of eleven strains was subdivided into two sub-clusters on the basis of methanol utilization. Five strains were facultative methylotrophs and were classified as Methylobacterium mesophilicum biovar 1. The other six strains did not utilize methanol, but on the basis of high phenotypic similarity of 83.6% were classified as M. mesophilicum biovar 2. The single reference strain comprising cluster 2 Pseudomonas extorquens NCIB 9399 was assigned to the genus Methylobacterium and classified as M. extorquens. Cluster 3 was the single reference strain Rhizobium CB 376.

Growth and enzymological characteristics of a pink-pigmented facultative methylotroph Methylobacterium sp. MB1.

PubMed

Baev, M V; Kuznetsov, E V; Skladnev, D A; Govorukhina, N I; Sterkin, V E; Tsygankov, Y D

1992-01-01

Growth characteristics of batch and continuous cultures of the pink facultative methylotroph Methylobacterium sp. MB1 were determined. The response of a chemostat culture to a pulse increase of methanol concentration was studied. Malate, succinate and oxaloacetate additions to the methanol-supplemented medium decreased batch culture growth inhibition by methanol. The carotenoid content in cells grown in a chemostat decreased with increasing growth rate. The key enzyme activities of C1-metabolism were measured in a chemostat culture at different dilution rates.

Relative Sea Level Trends Along the Coast of the Bay of Bengal

NASA Astrophysics Data System (ADS)

Becker, M.; Calmant, S.; Papa, F.; Delebecque, C.; Islam, A. S.; Shum, C. K.

2016-12-01

In the coastal belt of the Bay of Bengal, the sea level rise is one of a major threat, linked to climate change, which drastically affects the livelihoods of millions of people. A comprehensive understanding of sea level trends and its variability in this region is therefore crucial and should help to anticipate the impacts of climate change and implement adaptation strategies. This region is bordered mostly by Bangladesh, India, Malaysia, Myanmar, and Thailand. Here, we revisit the sea level changes in the Bay of Bengal region from tide gauges and satellite altimetry over the period 1993-2014. The 23 monthly mean tide gauge records, used in this study, are retrieved from PSMSL (15 records) and supplemented with Bangladeshi observations (8 records). We show that, over the satellite altimetry era, the sea level interannual/decadal variability is mainly due to ocean thermal expansion variability driven by IOD/ENSO events and their low frequency modulation. We focus on relative sea level rise at major coastal cities and try to separate the climatic signal (long term trend plus interannual/decadal variability) from local effects, in particular vertical land movements. Results from GPS are analysed where available. When no such data exist, vertical land movements are deduced from the combined use of tide gauge and altimetry data. While the analysis is performed over the whole region, a particular attention is given to the low-lyingBangladesh's coastal area.

Prevalence of Tinea capitis in school going children in Kolkata, West Bengal

PubMed Central

Kundu, D.; Mandal, L.; Sen, G.

2012-01-01

Background: In recent years the incidence of Tinea capitis, infection of scalp by dermatophytes, has increased in United Kingdom and North America. The trend may be similar in India. The objective of this study is to find the prevalence of Tinea capitis in school going urban children in Kolkata, West Bengal state. Materials and Methods: The present study is a cross-sectional study conducted in a government higher primary school in Kolkata. Results: Totally 505 students were screened and 52 were diagnosed to have Tinea capitis by clinical examination, giving a prevalence rate of 10% among school children. Prevalence rates among the age groups of 6–8, 9–11 and 12–14 years were almost the same, ranging from 9 to 11%. The prevalence rate was significantly high among the boys (14%). There was no significant difference in prevalence of infection among coconut oil users and castor oil users. Measures of general hygiene were similar among those who were infected with Tinea capitis and those who were not. The commonest clinical type of infection found was dull grey patches. Itching with hair loss was the major symptom and most of the infected children had cervical lymphadenopathy. The potassium hydroxide studies revealed endothrix spores in majority of samples. Conclusion: Tinea capitis in prevalent in school going urban children in Kolkata, West Bengal state and necessary measures must be undertaken to curtail this incidence. PMID:23225977

Dynamics of Fluvial Regime and its impact on the population displacement in the Gangetic Plain of West Bengal

NASA Astrophysics Data System (ADS)

Prasad, Suraj; Sen, Anjan

2017-04-01

River bank erosion is one of the major natural hazards in India. Basically it is a natural phenomenon, but the role of anthropogenic factor to trigger the problem is undeniable. In West Bengal, river bank erosion in Ganga River has become an acute problem in Malda and Murshidabad districts. In Musrshidabad district alone, more than 350 Km2 land has been lost in the past four decades and more than 80000 persons have been displaced in the entire state of West Bengal. The trigger for such large scale erosional work has been both natural as well as anthropogenic. Ganga River in West Bengal flows through an underdeveloped river channel, leading to frequent changes in the course of the river that further cause riverbank erosion along the riparian zones of the river. The construction of Farakka Barrage in Malda district in 1975 has only exacerbated the problem, causing siltation and associated erosional processes. The present work deals with the social impacts of the physical process of erosion, and primarily focuses on the migration pattern of uprooted communities of Malda and Murshidabad districts. The study uses Landsat Images and SRTM DEM to assess the changes in the course of Ganga River and primary survey to discern the present and future trends of migration in the affected areas, and concludes with an assessment of the social-ecological-landscape relationships in a region undergoing large scale physical as well as demographic change. Keywords: River Bank Erosion, Ganga River, Farakka Barrage, Landsat, SRTM DEM, Migration

Distribution of trace metals in surface seawater and zooplankton of the Bay of Bengal, off Rushikulya estuary, East Coast of India.

PubMed

Srichandan, Suchismita; Panigrahy, R C; Baliarsingh, S K; Rao B, Srinivasa; Pati, Premalata; Sahu, Biraja K; Sahu, K C

2016-10-15

Concentrations of trace metals such as iron (Fe), copper (Cu), zinc (Zn), cobalt (Co), nickel (Ni), manganese (Mn), lead (Pb), cadmium (Cd), chromium (Cr), arsenic (As), vanadium (V), and selenium (Se) were determined in seawater and zooplankton from the surface waters off Rushikulya estuary, north-western Bay of Bengal. During the study period, the concentration of trace metals in seawater and zooplankton showed significant spatio-temporal variation. Cu and Co levels in seawater mostly remained non-detectable. Other elements were found at higher concentrations and exhibited marked variations. The rank order distribution of trace metals in terms of their average concentration in seawater was observed as Fe>Ni>Mn>Pb>As>Zn>Cr>V>Se>Cd while in zooplankton it was Fe>Mn>Cd>As>Pb>Ni>Cr>Zn>V>Se. The bioaccumulation factor (BAF) of Fe was highest followed by Zn and the lowest value was observed with Ni. Results of correlation analysis discerned positive affinity and good relationship among the majority of the trace metals, both in seawater and zooplankton suggesting their strong affinity and coexistence. Copyright © 2016 Elsevier Ltd. All rights reserved.

Analyses of spontaneous pink mutant events in the stamen hairs of Tradescantia clone BNL 4430 cultivated in a nutrient solution circulating growth chamber.

PubMed

Ichikawa, S; Wushur, S

2000-12-20

In order to obtain more fundamental data on Tradescantia clone BNL 4430, one of the most suitable testers for environmental mutagens, the occurrences of spontaneous somatic pink mutations in the stamen hairs were scored for 52 weeks from 12 December 1998 to 10 December 1999, cultivating the young inflorescence-bearing shoots with roots in a nutrient solution circulating (NSC) growth chamber. The environmental conditions in the chamber were 22.0+/-0.5 degrees C during the 16h day with the light intensity of 7.5klx from white fluorescent tubes, and 20.0+/-0.5 degrees C at night. During the scoring period, 697,443 stamen hairs with an average cell number of 25.36 were observed and 2642 pink mutant events (PMEs) were detected. The overall spontaneous mutation frequency was 1.56+/-0.03 PMEs per 10(4) hair-cell divisions, and the frequency was significantly lower in May, July and August and significantly higher in November and December. By analyzing the sectoring patterns of 1856 PMEs (70.25% of PMEs detected), the most of 172 cases of multiple (two to five) pink sectors observed in the same hairs (scored as 232 PMEs for calculating mutation frequency) were found to be the results of events involving somatic recombinations occurred in single cells or cell lineages, rather than those of two or more independent somatic mutations occurred in different cells. This finding clearly shows the significance of somatic recombinations in producing such multiple sectors (382 sectors in total) which occupied 19.0% of the 2006 pink sectors in total analyzed. Somatic recombinations were considered to be playing a significant role also in producing single PMEs in the stamen hairs.

Traditional Practicing with Arsenic Rich Water in Fish Industries Leads to Health Hazards in West Bengal and North-Eastern States of India

NASA Astrophysics Data System (ADS)

Kashyap, C. A.

2014-12-01

The supply of good quality food is main necessity for economic and social health of urban and rural population throughout the globe. This study comes to know the severity of As in the west Bengal and north-eastern states of the India. Over the 75% large population of India lives in villages and associated with farming and its related work. West Bengal is the densest populated area of India, fish and rice is the staple food as well as in north-eastern states. For the fulfil demand of fish large population the area are used fisheries as the business. Arsenic contamination in ground water is major growing threat to worldwide drinking water resources. High As contamination in water have been reported in many parts of the world Chandrasekharam et al., 2001; Smedley and Kinniburgh, 2002; Farooq et al., 2010). In context to West Bengal and north-east states of India arsenic is main problem in the food chain. These areas are very rich in arsenic many fold higher concentrations of Arsenic than their respective WHO permissible limits have been reported in the water. Over the 36 million people in Bengal delta are at risk due to drinking of As contaminated water (Nordstrom, 2002). The highest concentration of arsenic (535 μg/L Chandrashekhar et al. 2012) was registered from Ngangkha Lawai Mamang Leikai area of Bishnupur district which is fifty fold of the WHO limit for arsenic and tenfold of Indian permissible limit. With the continuous traditional practicing (As rich water pond) and untreated arsenic rich water in fish industries leads to health hazards. A sustainable development in aquaculture should comprise of various fields including environmental, social, cultural and economic aspects. A scientific study has to be needed for the overcome on this problem and rain harvested water may be used for reduce the arsenic problems in fisheries.

Allogenic and Autogenic Signals in the Stratigraphic Record of the Deep-Sea Bengal Fan.

PubMed

Blum, Mike; Rogers, Kimberly; Gleason, James; Najman, Yani; Cruz, Jarrett; Fox, Lyndsey

2018-05-22

The Himalayan-sourced Ganges-Brahmaputra river system and the deep-sea Bengal Fan represent Earth's largest sediment-dispersal system. Here we present detrital zircon U-Pb provenance data from Miocene to middle Pleistocene Bengal Fan turbidites, and evaluate the influence of allogenic forcing vs. autogenic processes on signal propagation from the Himalaya to the deep sea. Our data record the strong tectonic and climatic forcing characteristic of the Himalayan system: after up to 2500 km of river transport, and >1400 km of transport by turbidity currents, the U-Pb record faithfully represents Himalayan sources. Moreover, specific U-Pb populations record Miocene integration of the Brahmaputra drainage with the Asian plate, as well as the rapid Plio-Pleistocene incision through, and exhumation of, the eastern Himalayan syntaxis. The record is, however, biased towards glacial periods when rivers were extended across the shelf in response to climate-forced sea-level fall, and discharged directly to slope canyons. Finally, only part of the record represents a Ganges or Brahmaputra provenance end-member, and most samples represent mixing from the two systems. Mixing or the lack thereof likely represents the fingerprint of autogenic delta-plain avulsions, which result in the two rivers delivering sediment separately to a shelf-margin canyon or merging together as they do today.

iPS models of Parkin and PINK1.

PubMed

Rakovic, Aleksandar; Seibler, Philip; Klein, Christine

2015-04-01

Parkinson disease (PD) is a degenerative disorder of the central nervous system resulting from depletion of dopaminergic neurons and currently remains incurable despite enormous international research efforts. The development of induced pluripotent stem cell (iPSC) technology opened up the unique possibility of studying disease mechanisms in human tissue that was otherwise not accessible, such as the brain. Of particular interest are the monogenetic forms of PD as they closely resemble the more common 'idiopathic' PD and, through the mutated protein, provide a clear research target in iPSC-derived neurons. Recessively inherited Parkin and PTEN-induced putative kinase 1 (PINK1) mutations have been investigated in this context and the present review describes the first insights gained from studies in iPSC-derived dopaminergic neurons, which comprise abnormalities in mitochondrial and dopamine homoeostasis, microtubular stability and axonal outgrowth. These new models of PD have a high translational potential that includes the identification of druggable targets, testing of known and novel therapeutic agents in the disease-relevant tissue using well-defined read-outs and potential regenerative approaches.

Evaluation of a New and Rapid Serologic Test for Detecting Brucellosis: Brucella Coombs Gel Test.

PubMed

Hanci, Hayrunisa; Igan, Hakan; Uyanik, Muhammet Hamidullah

2017-01-01

Many serological tests have been used for the diagnosis of human brucellosis. A new serological method is identified as Brucella Coombs gel test based on the principle of centrifugation gel system similar to the gel system used in blood group determination. In this system, if Brucella antibodies were present in the serum, antigen and antibody would remain as a pink complex on the gel. Otherwise, the pink Brucella antigens would precipitate at the bottom of the gel card system. In this study, we aimed to compare the Brucella Coombs gel test, a new, rapid screen and titration method for detection of non-agglutinating IgG with the Brucella Coombs test. For this study, a total of 88 serum samples were obtained from 45 healthy persons and 43 individuals who had clinical signs and symptoms of brucellosis. For each specimen, Rose Bengal test, standard agglutination test, Coombs test and Brucella Coombs gel test were carried out. Sensitivity and specificity of Brucella Coombs gel test were found as 100.0 and 82.2%, respectively. Brucella Coombs gel test can be used as a screening test with high sensitivity. By the help of pink Brucella antigen precipitation, the tests' evaluation is simple and objective. In addition, determination of Brucella antibody by rapid titration offers another important advantage.

Lateral variation in crustal and mantle structure in Bay of Bengal based on surface wave data

NASA Astrophysics Data System (ADS)

Kumar, Amit; Mukhopadhyay, Sagarika; Kumar, Naresh; Baidya, P. R.

2018-01-01

Surface waves generated by earthquakes that occurred near Sumatra, Andaman-Nicobar Island chain and Sunda arc are used to estimate crustal and upper mantle S wave velocity structure of Bay of Bengal. Records of these seismic events at various stations located along the eastern coast of India and a few stations in the north eastern part of India are selected for such analysis. These stations lie within regional distance of the selected earthquakes. The selected events are shallow focused with magnitude greater than 5.5. Data of 65, 37, 36, 53 and 36 events recorded at Shillong, Bokaro, Visakhapatnam, Chennai and Trivandrum stations respectively are used for this purpose. The ray paths from the earthquake source to the recording stations cover different parts of the Bay of Bengal. Multiple Filtering Technique (MFT) is applied to compute the group velocities of surface waves from the available data. The dispersion curves thus obtained for this data set are within the period range of 15-120 s. Joint inversion of Rayleigh and Love wave group velocity is carried out to obtain the subsurface information in terms of variation of S wave velocity with depth. The estimated S wave velocity at a given depth and layer thickness can be considered to be an average value for the entire path covered by the corresponding ray paths. However, we observe variation in the value of S wave velocity and layer thickness from data recorded at different stations, indicating lateral variation in these two parameters. Thick deposition of sediments is observed along the paths followed by surface waves to Shillong and Bokaro stations. Sediment thickness keeps on decreasing as the surface wave paths move further south. Based on velocity variation the sedimentary layer is further divided in to three parts; on top lay unconsolidated sediment, underlain by consolidated sediment. Below this lies a layer which we consider as meta-sediments. The thickness and velocity of these layers decrease from north

I-131 rose bengal excretion test is not dead

DOE Office of Scientific and Technical Information (OSTI.GOV)

Antico, V.F.; Denhartog, P.; Ash, J.M.

1985-03-01

One hundred and thirty I-131 Rose Bengal Excretion Studies (RBI) were performed on 84 patients over nine years. In 90% (56/60) of cases with biliary atresia, the 72-hour RBI was less than or equal to 7%. In only 12.5% (3/24) of cases with neonatal hepatitis was the 72-hour RBI less than or equal to 7%. The accuracy of the test was 91% with a specificity of 88%. Thirty patients later were studied following a Kasai procedure. The RBI test reliably predicted the patency of the anastomosis. The authors conclude that the 72-hour RBI is a reliable test in the diagnosismore » of biliary atresia and in the documentation of biliary patency following surgery, provided adequate care is taken in stool collection and measurement.« less

Towards Ladyland: Rokeya Sakhawat Hossain and the Movement for Women's Education in Bengal, "c." 1900-"c." 1932

ERIC Educational Resources Information Center

Bagchi, Barnita

2009-01-01

This paper analyses the work of Rokeya Sakhawat Hossain (1880-1932), urban Bengali Muslim educator and writer, placing her in the wider context of women organising themselves in associations to create social change through education for women, in the province of undivided Bengal in colonial India, from "c." 1900 to "c." 1932. A…

77 FR 60207 - Endangered and Threatened Wildlife and Plants; Proposed Threatened Status for Coral Pink Sand...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-10-02

...We, the U.S. Fish and Wildlife Service (Service) propose to list the Coral Pink Sand Dunes tiger beetle, Cicindela albissima, as a threatened species under the Endangered Species Act of 1973, as amended (Act); and propose to designate critical habitat for the species. In total, approximately 921 hectares (2,276 acres) are being proposed for designation as critical habitat. The proposed critical habitat is located in Kane County, Utah.

Mark.

ERIC Educational Resources Information Center

Lipman, Matthew; Smith, Theresa L., Ed.

Mark is the central character in this story designed to help adolescents formulate a philosophy of values. The story is well suited for use in high school social studies courses and/or in philosophy or guidance units. Mark's thoughts and actions are reported as he interacts with his family, friends, acquaintances, and individuals of authority…

Wearing pink as a stand against bullying: why we need to say more.

PubMed

Naugler, Diane

2010-01-01

This article presents a contextual discourse analysis of the media response to a campaign against bullying that was developed in the spring of 2007 in the Canadian province of Nova Scotia. As a feature of masculine socialization, male-on-male bullying secures the reproduction of an aggressive and heteronormative hegemonic masculinity (Connell, 1987) for boys and young men in contemporary North American mainstream culture. I argue that the celebration of the "Pink Campaign" is illustrative of the normalizing silences, or "unremarkability," about the related discourses of sexism and homophobia that motivate everyday practices of male-on-male bullying.

Evaluation of remote sensing in control of pink cotton bollworm

NASA Technical Reports Server (NTRS)

Lewis, L. N. (Principal Investigator); Coleman, V. B.

1972-01-01

The author has identified the following significant results. This investigation is attempting to evaluate the use of a satellite in monitoring the cotton production regulation program of the State of California as an aid in controlling pink bollworm infestation in the southern deserts of California. Color combined images of ERTS-1 multispectral images simulating color infrared are being used in crop identification. The status of each field is mapped from the imagery and is then compared to ground surveys taken at the time of each ERTS-1 overflight. Correlation has been to date 100%. A computer analysis will be performed to compare field status with the crop calendar in order to identify crops. Correlation is expected to be 80 to 90%. Cotton fields, because of their state regulated season which is exactly coincident with no other crop, are expected to be easily identified.

Enamel-based mark performance for marking Chinese mystery snail Bellamya chinensis

USGS Publications Warehouse

Wong, Alec; Allen, Craig R.; Hart, Noelle M.; Haak, Danielle M.; Pope, Kevin L.; Smeenk, Nicholas A.; Stephen, Bruce J.; Uden, Daniel R.

2013-01-01

The exoskeleton of gastropods provides a convenient surface for carrying marks, and i the interest of improving future marking methods our laboratory assessed the performance of an enamel paint. The endurance of the paint was also compared to other marking methods assessed in the past. We marked the shells of 30 adult Chinese mystery snails Bellamya chinensis and held them in an aquarium for 181 days. We observed no complete degradation of any enamel-paint mark during the 181 days. The enamel-paint mark was superior to a nai;-polish mark, which lasted a median of 100 days. Enamel-paint marks also have a lower rate of loss (0.00 month-1 181 days) than plastic bee tags (0.01 month-1, 57 days), gouache paint (0.07 month-1, 18.5 days), or car body paint from studies found in scientific literature. Legibility of enamel-paint marks had a median lifetime of 102 days. The use of enamel paint on the shells of gastropods is a viable option for studies lasting up to 6 months. Furthermore, visits to capture-mark-recapture site 1 year after application of enamel-paint marks on B. chinesnis shells produced several individuals on which the enamel paint was still visible, although further testing is required to clarify durability over longer periods.

Modeling the effect of Rose Bengal on growth and decay patterns of Pseudomonas aeruginosa, Escherichia coli and Staphylococcus aureus

NASA Astrophysics Data System (ADS)

Al-Akhras, M.-Ali H.; Shorman, Mohammad Al; Masadeh, Majed M.; Aljarrah, Khaled; Ababneh, Zaid

2018-02-01

Most infections caused by (Pseudomonas aeruginosa, Escherichia coli and Staphylococcus aureus) are hospital and community acquired infections in patients. Bacterial growths incorporated with photosensitizing material (Rose Bengal) with and without light were investigated. The results demonstrated that the viable counts are increasing in absence of light (in dark) for all samples incorporated with Rose Bengal. Variation in growth phases were noticed as expected, but there is no significant change in decay phases. Convenient and adequate mathematical modeling is in very good agreement with the experimental results and showed to be a very good approach of characterization the growth behaviors of the bacteria. Bandwidths are independent of bacteria group (gram-positive or gram-negative) but it seems totally dependent on the oxygen requirements; an anaerobic bacterium takes broader bandwidths than aerobic bacteria. This concludes that the growth and lethal rates of anaerobic are much greater than aerobic.

On denture marking.

PubMed

Borrman, H I; DiZinno, J A; Wasén, J; René, N

1999-06-01

During the last decades in Sweden dentures have been permanently marked with a stainless steel metal band incorporated into the acrylic and containing the patient's birth date, a special number, and "S" for Sweden. The last recommendation issued by the National Board of Health and Welfare states that "the patients shall always be offered denture marking and be informed about the benefit thereof. Denture marking is not permitted if the patient refuses it". Requirements for denture markers have been that they should be biologically inert (when incorporated into the denture), not be expensive, be easy to inscribe, be possible to retrieve after an accident, and survive elevated temperatures for a reasonable time under normal circumstances. Although the frequency of edentulousness has decreased in recent years due to the improvement in oral health there remains a need to address the issue of marking of complete dentures, because there is a large variation in the oral status of populations in different countries. Given that only one marked denture can reveal the identity of a deceased person when all other methods fail to do so, makes it worthwhile. Furthermore, denture marking is important in long-term care facilities. We have investigated the issue of denture marking in Europe and in the United States. The results from the European survey show that denture marking is, to our knowledge regulated by law only in Sweden and Iceland. In the US denture marking is so far mandatory in 21 states while New York State requires dentures to be marked if the patient requests it and several other states impose the obligation to mark dentures on long-term care facilities. Since there is no international consensus regarding the issue of denture marking it is important to address it. A survey from the Nordic countries has shown that if denture marking was in general use, the contribution to the establishment of identity by forensic odontology in cases of fire would increase by about 10

Trichodesmium blooms and warm-core ocean surface features in the Arabian Sea and the Bay of Bengal.

PubMed

Jyothibabu, R; Karnan, C; Jagadeesan, L; Arunpandi, N; Pandiarajan, R S; Muraleedharan, K R; Balachandran, K K

2017-08-15

Trichodesmium is a bloom-forming, diazotrophic, non-heterocystous cyanobacteria widely distributed in the warmer oceans, and their bloom is considered a 'biological indication' of stratification and nitrogen limitation in the ocean surface layer. In the first part of this paper, based on the retrospective analyses of the ocean surface mesoscale features associated with 59 Trichodesmium bloom incidences recorded in the past, 32 from the Arabian Sea and the Bay of Bengal, and 27 from the rest of the world, we have showed that warm-core features have an inducing effect on bloom formation. In the second part, we have considered the environmental preferences of Trichodesmium bloom based on laboratory and field studies across the globe, and proposed a view about how warm-core features could provide an inducing pre-requisite condition for the bloom formation in the Arabian Sea and the Bay of Bengal. Proposed that the subsurface waters of warm-core features maintain more likely chances for the conducive nutrient and light conditions required for the triggering of the blooms. Copyright © 2017 Elsevier Ltd. All rights reserved.

Human Impacts On The Bengal Delta's Response To Rapid Climate And Sea-Level Changes: Who Threatens Whom? (Invited)

NASA Astrophysics Data System (ADS)

Goodbred, S. L.

2009-12-01

The densely populated country of Bangladesh is often cited as being severely threatened by predicted changes in climate and accelerated sea-level rise. Justification for this grave assessment is founded in part on the low-lying nation's frequent inundation by river floods and storm surges, which affect millions of people annually. Indeed, nearly 50% of the delta system lies <3 m above sea level, and the 2001 IPCC report suggested that a 1.5 m rise could inundate 22,000 km2 of coastal lowland and displace 17 million people. However, these signs of pending trouble contrast in many ways with patterns of delta behavior observed in the geological record. Sedimentary deposits from the early Holocene demonstrate that the Bengal delta remained largely stable in the face of very rapid sea-level rise, owing to a strengthened Asian monsoon, enhanced fluvial sediment fluxes, and an effective dispersal system. So how can we assess this system's likely response to environmental change based on such seemingly contradictory patterns from the modern and Holocene delta? A first step would be to acknowledge that flooding and land loss are very different processes, and often negatively correlated. For the Bengal delta in particular, coastal and upland flooding is the very process that maintains the system's stability in the facing of rising seas. While such flooding is a strain on humans, for the natural environment it speaks more to a healthful future than decline. Here I present field-based observations of sediment dispersal in the modern Bengal delta, which demonstrate how the system may remain relatively stable over the next century. However, this potentially acceptable outcome becomes increasingly unlikely if human interferences are considered. For example, short-term strategies to mitigate flooding would likely involve artificial leveeing of the river and the diking of coastal lowlands, both of which would limit sedimentation and diminish relative elevation of the delta surface

Characterization of an Early-Onset, Autosomal Recessive, Progressive Retinal Degeneration in Bengal Cats.

PubMed

Ofri, Ron; Reilly, Christopher M; Maggs, David J; Fitzgerald, Paul G; Shilo-Benjamini, Yael; Good, Kathryn L; Grahn, Robert A; Splawski, Danielle D; Lyons, Leslie A

2015-08-01

A form of retinal degeneration suspected to be hereditary was discovered in a family of Bengal cats. A breeding colony was established to characterize disease progression clinically, electrophysiologically, and morphologically, and to investigate the mode of inheritance. Affected and related cats were donated by owners for breeding trials and pedigree analysis. Kittens from test and complementation breedings underwent ophthalmic and neuro-ophthalmic examinations and ERG, and globes were evaluated using light microscopy. Pedigree analysis, along with test and complementation breedings, indicated autosomal recessive inheritance and suggested that this disease is nonallelic to a retinal degeneration found in Persian cats. Mutation analysis confirmed the disease is not caused by CEP290 or CRX variants found predominantly in Abyssinian and Siamese cats. Ophthalmoscopic signs of retinal degeneration were noted at 9 weeks of age and became more noticeable over the next 4 months. Visual deficits were behaviorally evident by 1 year of age. Electroretinogram demonstrated reduced rod and cone function at 7 and 9 weeks of age, respectively. Rod responses were mostly extinguished at 14 weeks of age; cone responses were minimal by 26 weeks. Histologic degeneration was first observed at 8 weeks, evidenced by reduced photoreceptor numbers, then rapid deterioration of the photoreceptor layer and, subsequently, severe outer retinal degeneration. A recessively inherited primary photoreceptor degeneration was characterized in the Bengal cat. The disease is characterized by early onset, with histologic, ophthalmoscopic, and electrophysiological signs evident by 2 months of age, and rapid progression to blindness.

Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo: A Model of Single Vessel Stroke.

PubMed

Talley Watts, Lora; Zheng, Wei; Garling, R Justin; Frohlich, Victoria C; Lechleiter, James Donald

2015-06-23

In vivo imaging techniques have increased in utilization due to recent advances in imaging dyes and optical technologies, allowing for the ability to image cellular events in an intact animal. Additionally, the ability to induce physiological disease states such as stroke in vivo increases its utility. The technique described herein allows for physiological assessment of cellular responses within the CNS following a stroke and can be adapted for other pathological conditions being studied. The technique presented uses laser excitation of the photosensitive dye Rose Bengal in vivo to induce a focal ischemic event in a single blood vessel. The video protocol demonstrates the preparation of a thin-skulled cranial window over the somatosensory cortex in a mouse for the induction of a Rose Bengal photothrombotic event keeping injury to the underlying dura matter and brain at a minimum. Surgical preparation is initially performed under a dissecting microscope with a custom-made surgical/imaging platform, which is then transferred to a confocal microscope equipped with an inverted objective adaptor. Representative images acquired utilizing this protocol are presented as well as time-lapse sequences of stroke induction. This technique is powerful in that the same area can be imaged repeatedly on subsequent days facilitating longitudinal in vivo studies of pathological processes following stroke.

Efficacy of Genetically Modified Bt Toxins Alone and in Combinations Against Pink Bollworm Resistant to Cry1Ac and Cry2Ab

PubMed Central

Tabashnik, Bruce E.; Fabrick, Jeffrey A.; Unnithan, Gopalan C.; Yelich, Alex J.; Masson, Luke; Zhang, Jie; Bravo, Alejandra; Soberón, Mario

2013-01-01

Evolution of resistance in pests threatens the long-term efficacy of insecticidal proteins from Bacillus thuringiensis (Bt) used in sprays and transgenic crops. Previous work showed that genetically modified Bt toxins Cry1AbMod and Cry1AcMod effectively countered resistance to native Bt toxins Cry1Ab and Cry1Ac in some pests, including pink bollworm (Pectinophora gossypiella). Here we report that Cry1AbMod and Cry1AcMod were also effective against a laboratory-selected strain of pink bollworm resistant to Cry2Ab as well as to Cry1Ab and Cry1Ac. Resistance ratios based on the concentration of toxin killing 50% of larvae for the resistant strain relative to a susceptible strain were 210 for Cry2Ab, 270 for Cry1Ab, and 310 for Cry1Ac, but only 1.6 for Cry1AbMod and 2.1 for Cry1AcMod. To evaluate the interactions among toxins, we tested combinations of Cry1AbMod, Cry1Ac, and Cry2Ab. For both the resistant and susceptible strains, the net results across all concentrations tested showed slight but significant synergism between Cry1AbMod and Cry2Ab, whereas the other combinations of toxins did not show consistent synergism or antagonism. The results suggest that the modified toxins might be useful for controlling populations of pink bollworm resistant to Cry1Ac, Cry2Ab, or both. PMID:24244692

Carcinogens induce reversion of the mouse pink-eyed unstable mutation

PubMed Central

Schiestl, Robert H.; Aubrecht, Jiri; Khogali, Fathia; Carls, Nicholas

1997-01-01

Deletions and other genome rearrangements are associated with carcinogenesis and inheritable diseases. The pink-eyed unstable (pun) mutation in the mouse is caused by duplication of a 70-kb internal fragment of the p gene. Spontaneous reversion events in homozygous pun/pun mice occur through deletion of a duplicated sequence. Reversion events in premelanocytes in the mouse embryo detected as black spots on the gray fur of the offspring were inducible by the carcinogen x-rays, ethyl methanesulfonate, methyl methanesulfonate, ethyl nitrosourea, benzo[a]pyrene, trichloroethylene, benzene, and sodium arsenate. The latter three carcinogens are not detectable with several in vitro or in vivo mutagenesis assays. We studied the molecular mechanism of the carcinogen-induced reversion events by cDNA analysis using reverse transcriptase–PCR method and identified the induced reversion events as deletions. DNA deletion assays may be sensitive indicators for carcinogen exposure. PMID:9114032

Towards improved storm surge models in the northern Bay of Bengal

NASA Astrophysics Data System (ADS)

Krien, Y.; Testut, L.; Islam, A. K. M. S.; Bertin, X.; Durand, F.; Mayet, C.; Tazkia, A. R.; Becker, M.; Calmant, S.; Papa, F.; Ballu, V.; Shum, C. K.; Khan, Z. H.

2017-03-01

The northern Bay of Bengal is home to some of the deadliest cyclones recorded during the last decades. Storm surge models developed for this region significantly improved in recent years, but they still fail to predict patterns of coastal flooding with sufficient accuracy. In the present paper, we make use of a state-of-the art numerical modeling system with improved bathymetric and topographic data to identify the strengths, weaknesses, and to suggest areas for improvement of current storm surge models in this area. The new model is found to perform relatively well in reproducing waves characteristics and maximum water levels for the two extreme cyclones studied here: Phailin (2013) and Sidr (2007). The wave setup turns out to be small compared to the wind-driven surge, although it still plays a significant role for inland flooding. Relatively large tide-surge interactions mainly due to shallow water effects are also evidenced by the model. These findings plead in favor of further efforts to improve the representation of the bathymetry, especially in the nearshore area, and the implementation of models including tides and radiation stresses explicitly. The main limit of the model is its inability to predict the detailed patterns of coastal flooding satisfactorily. The reason lies mainly in the fact that topographic data also need to be further improved. In particular, a good knowledge of embankments characteristics (crest elevation and their condition) is found to be of primary importance to represent inland flooding correctly. Public authorities should take urgent action to ensure that better data are available to the scientific community, so that state-of-the-art storm surge models reaching a sufficiently high level of confidence can be used for emergency preparedness and to implement mitigation strategies in the northern Bay of Bengal.

Pink Frilly Dresses and the Avoidance of All Things "Girly": Children's Appearance Rigidity and Cognitive Theories of Gender Development

ERIC Educational Resources Information Center

Halim, May Ling; Ruble, Diane N.; Tamis-LeMonda, Catherine S.; Zosuls, Kristina M.; Lurye, Leah E.; Greulich, Faith K.

2014-01-01

Many young children pass through a stage of gender appearance rigidity; girls insist on wearing dresses, often pink and frilly, whereas boys refuse to wear anything with a hint of femininity. In 2 studies, we investigated the prevalence of this apparent hallmark of early gender development and its relation to children's growing identification with…

Geochemical evolution of groundwater in southern Bengal Basin: The example of Rajarhat and adjoining areas, West Bengal, India

NASA Astrophysics Data System (ADS)

Sahu, Paulami; Sikdar, P. K.; Chakraborty, Surajit

2016-02-01

Detailed geochemical analysis of groundwater beneath 1223 km2 area in southern Bengal Basin along with statistical analysis on the chemical data was attempted, to develop a better understanding of the geochemical processes that control the groundwater evolution in the deltaic aquifer of the region. Groundwater is categorized into three types: `excellent', `good' and `poor' and seven hydrochemical facies are assigned to three broad types: `fresh', `mixed' and `brackish' waters. The `fresh' water type dominated with sodium indicates active flushing of the aquifer, whereas chloride-rich `brackish' groundwater represents freshening of modified connate water. The `mixed' type groundwater has possibly evolved due to hydraulic mixing of `fresh' and `brackish' waters. Enrichment of major ions in groundwater is due to weathering of feldspathic and ferro-magnesian minerals by percolating water. The groundwater of Rajarhat New Town (RNT) and adjacent areas in the north and southeast is contaminated with arsenic. Current-pumping may induce more arsenic to flow into the aquifers of RNT and Kolkata cities. Future large-scale pumping of groundwater beneath RNT can modify the hydrological system, which may transport arsenic and low quality water from adjacent aquifers to presently unpolluted aquifer.

An assessment of oil-spill effects on pink salmon populations following the Exxon Valdez oil spill. Part 2: Adults and escapement

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maki, A.W.; Brannon, E.J.; Gilbertson, L.G.

1995-12-31

This paper presents results of a field program designed to monitor the status of wildstock pink salmon populations in Prince William Sound following the Exxon Valdez oil spill. Field counts of spawning salmon were conducted each year from 1989 through 1992 to test for spill effects o the distribution nd abundance of pink salmon adults spawning in selected streams in the southwestern portion of Prince William Sound, including streams from the most heavily oiled areas. Counts of whole-stream and intertidal escapement density were statistically compared for 40 study streams in 1989 and for a subset of those streams in successivemore » years. Measurements of residual hydrocarbons were made from stream-bed sediments to test for correlations with spawning behavior. Adult pink salmon in the postspill years of 1990 and 1991, progeny of the year classes considered most vulnerable to the oil spill, returned in high numbers, with the wildstock spawners exceeding their parent year returns. In 1989, adult returns reflected the relatively weak run for that year with a mean spawner density of 0.68 fish/m{sup 2} in reference streams and 0.69 fish/m{sup 2} in oiled streams. In 1990, mean escapement density for reference streams was 1.40 fish/m{sup 2} and 1.55 fish/m{sup 2} for oiled streams, indicating the strongest run of the four study years. Trends in polycyclic aromatic hydrocarbon (PAH) concentrations for the majority of oiled streams show a general decline from 1989 to background levels by 1990. 45 refs., 14 figs., 5 tabs.« less

Stretch marks

MedlinePlus

Stretch marks can appear when there is rapid stretching of the skin. The marks appear as parallel ... often disappear after the cause of the skin stretching is gone. Avoiding rapid weight gain helps reduce ...

Stretch Marks

MedlinePlus

... stretch marks. This isn't true with regular tanning or tanning beds , though: Stretch marks are less likely to ... up looking more obvious. Plus, the sun and tanning beds do more harm than good when it ...

Effects of Short-Term Presalting and Salt Level on the Development of Pink Color in Cooked Chicken Breasts

PubMed Central

2017-01-01

The objective of this study was to determine the effects of short-term presalting on pink color and pigment characteristics in ground chicken breasts after cooking. Four salt levels (0%, 1%, 2%, and 3%) were presalted and stored for 0 and 3 d prior to cooking. Cooking yield was increased as salt level was increased. However, no significant differences in pH values or oxidation reduction potential (ORP) of cooked chicken breasts were observed. Cooked products with more than 2% of salt level had less redder (lower CIE a* value) on day 3 than on those on day 0. As salt level was increased to 2%, myoglobin was denatured greatly. Myoglobin denaturation was leveled off when samples had 3% of salt. With increasing salt levels, residual nitrite contents were increased while nitrosyl hemochrome contents were decreased. These results demonstrate that salt addition to a level of more than 2% to ground meat may reduce the redness of cooked products and that presalting storage longer than 3 d should be employed to develop a natural pink color of ground chicken products when less than 1% salt is added to ground chicken meat. PMID:28316476

Deep subsurface life in Bengal Fan sediments (IODP Exp. 354)

NASA Astrophysics Data System (ADS)

Adhikari, R. R.; Heuer, V. B.; Elvert, M.; Kallmeyer, J.; Kitte, J. A.; Wörmer, L.; Hinrichs, K. U.

2017-12-01

We collected Bengal Fan sediment samples along a 8°N transect during International Ocean Discovery Program Expedition 354 (February - March 2015, Singapore - Colombo, Sri Lanka) to study subseafloor life in this, as yet unstudied, area. Among other biogeochemical parameters, we quantified microbial biomass by analyzing prokaryotic cells using epifluorescence microscopy after detaching cells from the sediment, and bacterial endospores by analyzing the diagnostic biomarker dipicolinic acid (DPA) by detection of fluorescence of the terbium-DPA complex. To gain understanding of total microbial activity, we quantified hydrogen utilization potential of hydrogenase enzymes, which are ubiquitous in subsurface microorganisms, by using a tritium assay. We measured highest cell concentrations of ca. 108 cells g-1 in shallow sediments close to the seafloor. These concentrations are one to two orders of magnitude lower than in most marine continental margin settings [1]. Similar to the global trend [1], cell concentrations decreased with depth according to a power-law function. Endospore concentrations scattered between ca. 105 and 107 cells g-1 sediment at all sites and depths. We could not observe a clear relationship of endospore concentration and sediment depth; instead, it appears to be linked to lithology and total organic carbon content. Bulk Hydrogenase enzyme activity ranged from nmolar to μmolar range of H2 g-1d-1. Similar to previous observations [2], per-cell hydrogen utilization depends on vertical biogeochemical zones, which could be due to the differences in hydrogen utilization requirements/efficiency of the respective metabolic processes such as sulfate reduction, methanogenesis, fermentation etc. Bengal fan is highly dynamic due to channel and levee systems and the sediments are dominated by turbidites, thick sand layers and hemipelagic deposits, which may control biogeochemical zonation. Based on our microbial biomass and activity data, we suggest that the

ABO, Rhesus, and Kell Antigens, Alleles, and Haplotypes in West Bengal, India

PubMed Central

Basu, Debapriya; Datta, Suvro Sankha; Montemayor, Celina; Bhattacharya, Prasun; Mukherjee, Krishnendu; Flegel, Willy A.

2018-01-01

Background Few studies have documented the blood group antigens in the population of eastern India. Frequencies of some common alleles and haplotypes were unknown. We describe phenotype, allele, and haplotype frequencies in the state of West Bengal, India. Methods We tested 1,528 blood donors at the Medical College Hospital, Kolkata. The common antigens of the ABO, Rhesus, and Kell blood group systems were determined by standard serologic methods in tubes. Allele and haplotype frequencies were calculated with an iterative method that yielded maximum-likelihood estimates under the assumption of a Hardy-Weinberg equilibrium. Results The prevalence of ABO antigens were B (34%), O (32%), A (25%), and AB (9%) with ABO allele frequencies for O = 0.567, A = 0.189, and B = 0.244. The D antigen (RH1) was observed in 96.6% of the blood donors with RH haplotype frequencies, such as for CDe = 0.688809, cde = 0.16983 and CdE = 0.000654. The K antigen (K1) was observed in 12 donors (0.79%) with KEL allele frequencies for K = 0.004 and k = 0.996. Conclusions: For the Bengali population living in the south of West Bengal, we established the frequencies of the major clinically relevant antigens in the ABO, Rhesus, and Kell blood group systems and derived estimates for the underlying ABO and KEL alleles and RH haplotypes. Such blood donor screening will improve the availability of compatible red cell units for transfusion. Our approach using widely available routine methods can readily be applied in other regions, where the sufficient supply of blood typed for the Rh and K antigens is lacking. PMID:29593462

New report of additional enterobacterial species causing wilt in West Bengal, India.

PubMed

Sarkar, Shamayeeta; Chaudhuri, Sujata

2015-07-01

Ralstonia solanacearum is known to be the most prominent causal agent of bacterial wilt worldwide. It has a wide host range comprising solanaceous and nonsolanaceous plants. Typical symptoms of the disease are leaf wilt, browning of vascular tissues, and collapsing of the plant. With the objective of studying the diversity of pathogens causing bacterial wilt in West Bengal, we collected samples of diseased symptomatic crops and adjacent symptomatic and asymptomatic weeds from widespread locations in West Bengal. By means of a routine molecular identification test specific to "R. solanacearum species complex", the majority of these strains (68 out of 71) were found to not be R. solanacearum. Presumptive identification of these isolates with conventional biochemicals, extensive testing of pathogenicity of a subset involving greenhouse trials fulfilling Koch's postulate test, and scanning electron microscopic analysis for the presence of pathogen in diseased plants were done. 16S rDNA sequencing of a subset of these strains (GenBank accession Nos. JX880249-JX880251) and analysis of sequences with the nBLAST programme showed a high similarity (97%-99%) to sequences of the Enterobacteriaceae group available in GenBank. Molecular phylogeny further established the taxonomic position of the strains. The 3 bacterial strain cultures have been submitted to MTCC, Institute of Microbial Technology, Chandigarh, India, and were identified as Klebsiella oxytoca, Enterobacter cowanii, and Klebsiella oxytoca, respectively. Although Enterobacter sp. has previously been reported to cause wilt in many plants, susceptibility of most of the dedicated hosts of R. solanacearum to wilt caused by Enterobacter and other bacteria from Enterobacteriaceae is being reported for the first time in this work.

Reconstructing the Glacial Cycle of the Last 150 ka in the Southern Bay of Bengal

NASA Astrophysics Data System (ADS)

Holmes, B.; Dekens, P.; Weber, M. E.; Lantzsch, H.; Reilly, B. T.; Das, S. K.; Martos, Y. M.; Williams, T.

2017-12-01

The Himalayas and resulting monsoonal climate provide the source and mechanism for sediment deposition in the Bay of Bengal. Sediments from the distal Bengal Fan collected during IODP expedition 354, with the exception the westernmost Site U1454, show a several meter thick, hemipelagic top layer representing the Late Quaternary. This interval has abundant foraminifera throughout and therefore presents a unique opportunity to reconstruct oceanographic conditions, alongside records of terrestrial climate variability. We reconstructed oceanographic conditions at IODP site U1452 (8°N, 87°E, 3671 m water depth), in the southern Bay of Bengal. The age model was constructed by tuning the core's sediment lightness, L*, to the EDML ice core. The Toba Ash 1 (73.7 ka) is an additional constraint leading to an age model with a total of 35 tie points. We sampled the top 3.5 m of sediment at 2 cm resolution, and picked between 8 to 30 tests of the mixed surface layer planktonic foraminifera G. sacculifer from each sample. The tests were cracked open between two glass plates and the sample was homogenized before being split into separate aliquots for d18O and Mg/Ca analysis. Mg/Ca data range from 2.5 to 4.1 mmol/mol and show a SST change of 2-4°C between glacial and interglacial times. The δ18O data range from -2.63 to 0.17‰. The data shows the shift from the cooler glacial period into the warming interglacial period at 15 ka ending the LGM. The apparent late timing of the deglaciation in the record could be an artifact of lower resolution of the δ18O data (compared to the benthic stack). It is also possible the offset in the timing is due to the age model limitations and the assumption of linear sedimentation rates between tie points. We will further explore the age model implications by measuring d18O on benthic foraminifera where available in the sediment core. In collaboration with scientists from IODP Expedition 354, this data can be used to examine the link between

The Drosophila pigmentation gene pink (p) encodes a homologue of human Hermansky-Pudlak syndrome 5 (HPS5).

PubMed

Falcón-Pérez, Juan M; Romero-Calderón, Rafael; Brooks, Elizabeth S; Krantz, David E; Dell'Angelica, Esteban C

2007-02-01

Lysosome-related organelles comprise a group of specialized intracellular compartments that include melanosomes and platelet dense granules (in mammals) and eye pigment granules (in insects). In humans, the biogenesis of these organelles is defective in genetic disorders collectively known as Hermansky-Pudlak syndrome (HPS). Patients with HPS-2, and two murine HPS models, carry mutations in genes encoding subunits of adaptor protein (AP)-3. Other genes mutated in rodent models include those encoding VPS33A and Rab38. Orthologs of all of these genes in Drosophila melanogaster belong to the 'granule group' of eye pigmentation genes. Other genes associated with HPS encode subunits of three complexes of unknown function, named biogenesis of lysosome-related organelles complex (BLOC)-1, -2 and -3, for which the Drosophila counterparts had not been characterized. Here, we report that the gene encoding the Drosophila ortholog of the HPS5 subunit of BLOC-2 is identical to the granule group gene pink (p), which was first studied in 1910 but had not been identified at the molecular level. The phenotype of pink mutants was exacerbated by mutations in AP-3 subunits or in the orthologs of VPS33A and Rab38. These results validate D. melanogaster as a genetic model to study the function of the BLOCs.

Pavement markings and safety.

DOT National Transportation Integrated Search

2010-11-01

Previous research on pavement markings from a safety perspective tackled various issues such as pavement marking retroreflectivity : variability, relationship between pavement marking retroreflectivity and driver visibility, or pavement marking impro...

Complete mitochondrial genome of the pink clownfish Amphiprion perideraion (Pisces: Perciformes, Pomacentridae).

PubMed

Hu, Xueyi; Li, Jianlong; Liu, Min

2016-01-01

In this study the complete mitochondrial (mt) genome of the pink clownfish Amphiprion perideraion was obtained by using eight consensus primer pairs with a long PCR technique. The circular mtDNA molecule was 16,579 bp in size and the overall nucleotide composition of the H-strand was 29.37% A, 25.50% T, 15.68% G and 29.45% C, with an A + T bias. The complete mitogenome contained 13 protein-coding genes, 2 rRNAs, 22 tRNAs and a control region, and the gene order was typical of vertebrate mitogenomes. The complete mitochondrial genome of A. perideraion is a representative of the subgenus Phalerebus for mitogenomes database of anemonefishes, which can be used to unveil taxonomic problems and phylogenetic relationships in Amphiprioninae.

Food security and anthropometric failure among tribal children in Bankura, West Bengal.

PubMed

Mukhopadhyay, D K; Biswas, A B

2011-04-01

We conducted a cross-sectional study among 188 tribal children aged 6-59 months using two-stage sampling in Bankura-I Block of Bankura district, West Bengal, India, to assess their nutritional status and its relation with household food security. Weight and height/length were measured and analyzed as per new WHO Growth Standards. Mothers of the study children were interviewed to obtain relevant information. Prevalence of Composite Index of Anthropometric Failure was 69.1%; and multiple anthropometric failures were more likely among tribal children aged 24-59 months with irregular utilization of supplementary nutrition and from households with severe grades of food security.

Salmon on the Edge: Growth and Condition of Juvenile Chum and Pink Salmon in the Northeastern Bering Sea

NASA Astrophysics Data System (ADS)

McPhee, M. V.

2016-02-01

As the Arctic and Subarctic regions warm, Pacific salmon (Oncorhynchus spp.) are expected to expand their range northward during ice-free periods in the Bering and Chukchi seas. The oscillating control hypothesis, which describes energetic differences of primary consumers between ice-associated and pelagic production phases, provides a framework for understanding how juvenile salmon might respond to changing conditions at the northern edge of their marine range. Additionally, relationships between growth/condition and temperature, salinity and bottom depth will help identify marine habitats supporting growth at the Arctic-Subarctic interface. In this study, we used survey data from NOAA and Arctic Ecosystem Integrated Survey project to 1) compare growth and condition of juvenile pink (O. gorbuscha) and chum (O. keta) salmon in the NE Bering Sea between warm and cool spring phases, and 2) describe relationships between summer environmental conditions and juvenile salmon growth and condition from 2006 - 2010. Chum and pink salmon were shorter, and chum salmon exhibited greater energy density, in years with cool springs; however, no other aspects of size and condition differed significantly between phases. Over all years, longer and more energy dense individuals of both species were caught at stations with greater bottom depths and in cooler sea-surface temperatures. We found little evidence that chlorophyll-a explained much of the variation in size or condition. We used insulin-like growth factor-1 (IGF-1) concentration as an indicator of relative growth rate for fishes sampled in 2009-2012 and that found juvenile salmon exhibited higher IGF-1 concentrations in 2010-2012 than in 2009. IGF-1 concentrations tended to increase with SST in chum salmon and with bottom depth (a proxy for distance from shore) in pink salmon, but more years of data are needed to adequately describe the relationship of IGF with environmental conditions. This study, although descriptive in

Vitro culture of axe-head glochidia in pink heelsplitter Potamilus alatus and mechanism of its high host specialists

PubMed Central

Ma, Xue Yan; Zheng, Bing Qing; Xu, Pao; Xu, Liang; Hua, Dan; Yuan, Xin Hua; Gu, Ruo Bo

2018-01-01

The basal media M199 or MEM was utilized in the classical method of vitro culture of glochidia where 1–5% CO2 was required to maintain stable physiological pH for completion of non-parasitic metamorphosis. The classical method encounters a great challenge to those glochidia which undergo development of visceral tissue but significantly increase in size during metamorphosis. The improved in vitro culture techniques and classical methods were firstly compared for non-parasitic metamorphosis and development of glochidia in pink heelsplitter. Based on the improved method, the optimal vitro culture media was further selected from 14 plasmas or sera, realizing the non-parasitic metamorphosis of axe-head glochidia for the first time. The results showed that addition of different plasma (serum) had significant effect on glochidial metamorphosis in pink heelsplitter. Only glochidia in the skewband grunt and red drum groups could complete metamorphosis, the metamorphosis rate in skewband grunt was 93.3±3.1% at 24±0.5°C, significantly higher than in marine and desalinated red drum. Heat-inactivated treatment on the plasma of yellow catfish and Barbus capito had significant effect on glochidia survival and shell growth. The metamorphosis rate also varied among different gravid period, and generally decreased with gravid time. Further comparison of free amino acid and fatty acid indicated that the taurine of high concentration was the only amino acid that might promote the rapid growth of glochidial shell, and the lack of adequate DPA and DHA might be an important reason leading to the abnormal foot and visceral development. Combined with our results of artificial selection of host fish, we tentatively established the mechanism of its host specialists in pink heelsplitter for the first time. This is the first report on non-parasite metamorphosis of axe-head glochidia based on our improved vitro culture method, which should provide important reference to fundamental theory

Expression of neuronal and signaling proteins in penumbra around a photothrombotic infarction core in rat cerebral cortex.

PubMed

Demyanenko, S V; Panchenko, S N; Uzdensky, A B

2015-06-01

Photodynamic impact on animal cerebral cortex using water-soluble Bengal Rose as a photosensitizer, which does not cross the blood-brain barrier and remains in blood vessels, induces platelet aggregation, vessel occlusion, and brain tissue infarction. This reproduces ischemic stroke. Irreversible cell damage within the infarction core propagates to adjacent tissue and forms a transition zone - the penumbra. Tissue necrosis in the infarction core is too fast (minutes) to be prevented, but much slower penumbral injury (hours) can be limited. We studied the changes in morphology and protein expression profile in penumbra 1 h after local photothrombotic infarction induced by laser irradiation of the cerebral cortex after Bengal Rose administration. Morphological study using standard hematoxylin/eosin staining showed a 3-mm infarct core surrounded by 1.5-2.0 mm penumbra. Morphological changes in the penumbra were lesser and decreased towards its periphery. Antibody microarrays against 224 neuronal and signaling proteins were used for proteomic study. The observed upregulation of penumbra proteins involved in maintaining neurite integrity and guidance (NAV3, MAP1, CRMP2, PMP22); intercellular interactions (N-cadherin); synaptic transmission (glutamate decarboxylase, tryptophan hydroxylase, Munc-18-1, Munc-18-3, and synphilin-1); mitochondria quality control and mitophagy (PINK1 and Parkin); ubiquitin-mediated proteolysis and tissue clearance (UCHL1, PINK1, Parkin, synphilin-1); and signaling proteins (PKBα and ERK5) could be associated with tissue recovery. Downregulation of PKC, PKCβ1/2, and TDP-43 could also reduce tissue injury. These changes in expression of some neuronal proteins were directed mainly to protection and tissue recovery in the penumbra. Some upregulated proteins might serve as markers of protection processes in a penumbra.

Characterization of an Early-Onset, Autosomal Recessive, Progressive Retinal Degeneration in Bengal Cats

PubMed Central

Ofri, Ron; Reilly, Christopher M.; Maggs, David J.; Fitzgerald, Paul G.; Shilo-Benjamini, Yael; Good, Kathryn L.; Grahn, Robert A.; Splawski, Danielle D.; Lyons, Leslie A.

2015-01-01

Purpose A form of retinal degeneration suspected to be hereditary was discovered in a family of Bengal cats. A breeding colony was established to characterize disease progression clinically, electrophysiologically, and morphologically, and to investigate the mode of inheritance. Methods Affected and related cats were donated by owners for breeding trials and pedigree analysis. Kittens from test and complementation breedings underwent ophthalmic and neuro-ophthalmic examinations and ERG, and globes were evaluated using light microscopy. Results Pedigree analysis, along with test and complementation breedings, indicated autosomal recessive inheritance and suggested that this disease is nonallelic to a retinal degeneration found in Persian cats. Mutation analysis confirmed the disease is not caused by CEP290 or CRX variants found predominantly in Abyssinian and Siamese cats. Ophthalmoscopic signs of retinal degeneration were noted at 9 weeks of age and became more noticeable over the next 4 months. Visual deficits were behaviorally evident by 1 year of age. Electroretinogram demonstrated reduced rod and cone function at 7 and 9 weeks of age, respectively. Rod responses were mostly extinguished at 14 weeks of age; cone responses were minimal by 26 weeks. Histologic degeneration was first observed at 8 weeks, evidenced by reduced photoreceptor numbers, then rapid deterioration of the photoreceptor layer and, subsequently, severe outer retinal degeneration. Conclusions A recessively inherited primary photoreceptor degeneration was characterized in the Bengal cat. The disease is characterized by early onset, with histologic, ophthalmoscopic, and electrophysiological signs evident by 2 months of age, and rapid progression to blindness. PMID:26258614

Origin and fate of sedimentary organic matter in the northern Bay of Bengal during the last 18 ka

NASA Astrophysics Data System (ADS)

Contreras-Rosales, L. A.; Schefuß, E.; Meyer, V.; Palamenghi, L.; Lückge, A.; Jennerjahn, T. C.

2016-11-01

The Northern Bay of Bengal (NBoB) is a globally important region for deep-sea organic matter (OM) deposition due to massive fluvial discharge from the Ganges-Brahmaputra-Meghna (G-B-M) rivers and moderate to high surface productivity. Previous studies have focused on carbon burial in turbiditic sediments of the Bengal Fan. However, little is known about the storage of carbon in pelagic and hemipelagic sediments of the Bay of Bengal over millennial time scales. This study presents a comprehensive history of OM origin and fate as well as a quantification of carbon sediment storage in the Eastern Bengal Slope (EBS) during the last 18 ka. Bulk organic proxies (TOC, TIC, TN, δ13CTOC, δ15NTN) and content and composition of total hydrolysable amino acids (THAA) in a sediment core (SO188-342KL) from the EBS were analyzed. Three periods of high OM accumulation were identified: the Late Glacial (LG), the Bölling/Alleröd (B/A), and the Early Holocene Climatic Optimum (EHCO). Lower eustatic sea level before 15 ka BP allowed a closer connection between the EBS and the fluvial debouch, favoring high terrestrial OM input to the core site. This connection was progressively lost between 15 and 7 ka BP as sea level rose to its present height and terrestrial OM input decreased considerably. Export and preservation of marine OM was stimulated during periods of summer monsoon intensification (B/A and EHCO) as a consequence of higher surface productivity enhanced by cyclonic-eddy nutrient pumping and fluvial nutrient delivery into the photic zone. Changes in the THAA composition indicate that the marine plankton community structure shifted from calcareous-dominated before 13 ka BP to siliceous-dominated afterwards. They also indicate that the relative proportion of marine versus terrestrial OM deposited at site 342KL was primarily driven by relative sea level and enlarged during the Holocene. The ballasting effect of lithogenic particles during periods of high coastal proximity and

Regional modeling of groundwater flow and arsenic transport in the Bengal Basin: challenges of scale and complexity (Invited)

NASA Astrophysics Data System (ADS)

Michael, H. A.; Voss, C. I.

2009-12-01

Widespread arsenic poisoning is occurring in large areas of Bangladesh and West Bengal, India due to high arsenic levels in shallow groundwater, which is the primary source of irrigation and drinking water in the region. The high-arsenic groundwater exists in aquifers of the Bengal Basin, a huge sedimentary system approximately 500km x 500km wide and greater than 15km deep in places. Deeper groundwater (>150m) is nearly universally low in arsenic and a potential source of safe drinking water, but evaluation of its sustainability requires understanding of the entire, interconnected regional aquifer system. Numerical modeling of flow and arsenic transport in the basin introduces problems of scale: challenges in representing the system in enough detail to produce meaningful simulations and answer relevant questions while maintaining enough simplicity to understand controls on processes and operating within computational constraints. A regional groundwater flow and transport model of the Bengal Basin was constructed to assess the large-scale functioning of the deep groundwater flow system, the vulnerability of deep groundwater to pumping-induced migration from above, and the effect of chemical properties of sediments (sorption) on sustainability. The primary challenges include the very large spatial scale of the system, dynamic monsoonal hydrology (small temporal scale fluctuations), complex sedimentary architecture (small spatial scale heterogeneity), and a lack of reliable hydrologic and geologic data. The approach was simple. Detailed inputs were reduced to only those that affect the functioning of the deep flow system. Available data were used to estimate upscaled parameter values. Nested small-scale simulations were performed to determine the effects of the simplifications, which include treatment of the top boundary condition and transience, effects of small-scale heterogeneity, and effects of individual pumping wells. Simulation of arsenic transport at the large

Marking nut anaphylaxis

PubMed Central

Kral, Anita Christine; Hayball, John; Smith, William B

2016-01-01

Marking nut Semecarpus anacardium, so-called because it contains a pigment that has been used in the past to mark fabrics, is a known cause of contact hypersensitivity. It may be ingested as an ingredient of some traditional Hindi foods. We describe the first reported case of anaphylaxis to marking nut. PMID:27489793

Mark Mehos | NREL

Science.gov Websites

Mehos Photo of Mark Mehos Mark Mehos Group Manager, Thermal Systems R&D Mark.Mehos@nrel.gov Thermal Systems R&D group at NREL, which includes the Concentrating Solar Power (CSP) Program. Since SolarPACES "Solar Thermal Electric Power Systems" task, which focuses on the development of

Leaving A Mark: A Comparison Arthropod Protein Marking Protocols

USDA-ARS?s Scientific Manuscript database

Knowledge of arthropod pest and natural enemy disperal patterns is needed for effective and environmentally benign pest control. The most common tactics used to monitor arthropod dispersal patterns include mark-release-recapture (MRR) and mark-capture methodologies. Both methods require the applica...

Pink spot, white spot: the pineal skylight of the leatherback turtle (Dermochelys coriacea Vandelli 1761) skull and its possible role in the phenology of feeding migrations

USGS Publications Warehouse

Davenport, John; Jones, T. Todd; Work, Thierry M.; Balazs, George H.

2014-01-01

Leatherback turtles, Dermochelys coriacea, which have an irregular pink area on the crown of the head known as the pineal or ‘pink spot’, forage upon jellyfish in cool temperate waters along the western and eastern margins of the North Atlantic during the summer. Our study showed that the skeletal structures underlying the pink spot in juvenile and adult turtles are compatible with the idea of a pineal dosimeter function that would support recognition of environmental light stimuli. We interrogated an extensive turtle sightings database to elucidate the phenology of leatherback foraging during summer months around Great Britain and Ireland and compared the sightings with historical data for sea surface temperatures and day lengths to assess whether sea surface temperature or light periodicity/levels were likely abiotic triggers prompting foraging turtles to turn south and leave their feeding grounds at the end of the summer. We found that sea temperature was too variable and slow changing in the study area to be useful as a trigger and suggest that shortening of day lengths as the late summer equilux is approached provides a credible phenological cue, acting via the pineal, for leatherbacks to leave their foraging areas whether they are feeding close to Nova Scotia or Great Britain and Ireland.

Mastering Marking Madness

ERIC Educational Resources Information Center

Moore, Brooke

2009-01-01

Teachers are smart people, so why does marking reduce them to stressed and soulless messes? Because in their hearts they know that students do not learn from it, and that drives them nuts. Researchers like Lorna Earl and Dylan Wiliam have looked closely at marking systems and have proven what teachers already know deep down: marking student work…

Lessons Learned From Developing a Sustainable Arsenic-Safe Water Program in West Bengal, India Over a Period of Eight Years

NASA Astrophysics Data System (ADS)

Smith, M. M.; Liaw, J.; Hira, A.; Guha, P.; Pal, S. S.; Hore, T.; Smith, A. H.

2010-12-01

Arsenic is a carcinogen, and causes many cancers and noncancer diseases. Recent findings have shown that exposure to arsenic in drinking water as a child or before birth can cause illness and death even as an adult. In the West Bengal region of India, more than six million people are drinking crystal clear but arsenic-contaminated water from tubewells. Project Well, a non-profit organization based in California, has provided safe drinking water to villages in West Bengal since 2001 through modern modified dugwells, currently numbering 163. Along the way, Project Well has faced the challenge of persuading people to stop consuming good-tasting, arsenic-laced water and instead drink chlorinated water, which is safe but may have the smell of chlorine. Additionally, West Bengal receives abundant annual rainfall, and hence it is difficult to convince people to pay for treated water. From its inception, the Project Well program was set up with a tracking system to assess the efficacy of the modern dugwells, which has helped identify where technical improvements were needed. Continuous interaction with community-based user groups has also helped overcome many constraints and make the program sustainable. Project Well monitoring records from August 2010 show that out of 163 modern dugwells, 48 percent were being used, providing water for 2948 villagers; 23 percent were closed; 6 percent were dry (11 districts of West Bengal were in a drought); 6 percent required maintenance; and 7 percent were not used. Arsenic concentrations in the modern dugwells were measured every year during peak season when the water table was low and the median arsenic concentration of operational dugwells over the eight years between 2002 and 2010 was 15 ppb (the permissible limit in India is 50 ppb). Each year, about 6 to 10 percent of the dugwells have arsenic levels above 50 ppb during the summer season, when the water level is low. Bacterial counts, i.e., total coliform and fecal coliform, are

Sedimentary Controls on Foraminifera Deposition in the Bay of Bengal: Implications from Single Shell Mg/Ca and δ18O

NASA Astrophysics Data System (ADS)

Fritz-Endres, T.; Dekens, P.; Spero, H. J.; Fehrenbacher, J. S.; Spiess, V.; France-Lanord, C.

2016-12-01

Sediment cores from the Bay of Bengal present an opportunity to improve our understanding of the links between terrestrial and oceanographic climate variability. Foraminifera archive key proxies for reconstructing oceanographic conditions, but in Bengal fan sediments, fossils may have been transported via turbidity currents. Given the difference in SST and SSS variability in the southern (29.0±0.8°C; 33.9 ±0.3‰) and the northern Bay of Bengal (28.0±1.4°C; 31.6±0.8‰), it is important to determine the source of foraminifera to the sediment cores before attempting paleoceanographic reconstructions. We present paired Mg/Ca and δ18O data from single Globigerinoides sacculifer in mudline samples from three locations with differing oceanographic conditions. Two sites are from IODP Expedition 354 and one site is from the continental shelf. IODP Site U1454 (8.4°N, 85.5°E, 3721 m water depth) is near the modern active channel and more likely to be influenced by transport, while IODP site U1449 (8.4°N, 88.7°E, 3653 m water depth) is 200 km from channel activity and site 342KL (20.6°N, 90°E, 1256 m water depth) is on the continental shelf. The distribution of 70 to 80 Mg/Ca and δ18O data-points reflects the seasonal signal at the location foraminifera calcified. Mg/Ca and δ18O data from site U1449 (far from channel activity) have a distribution that most closely reflects the seasonal oceanographic conditions of the overlying water column. However, the distribution of G. sacculifer Mg/Ca and δ18O from site U1454 (near the active channel) has similarities to the distribution of the G. sacculifer Mg/Ca and δ18O data from the continental shelf. Our data suggest that foraminifera near the active channel are a mixture of shells from the overlying water column and shells transported from the northern Bay of Bengal. We suggest foraminifera can be used to reconstruct SST and δ18O in this complex depositional environment, but caution must be taken when the down

Arsenic incorporation into authigenic pyrite, Bengal Basin sediment, Bangladesh

USGS Publications Warehouse

Lowers, H.A.; Breit, G.N.; Foster, A.L.; Whitney, J.; Yount, J.; Uddin, Md. N.; Muneem, Ad. A.

2007-01-01

Sediment from two deep boreholes (???400 m) approximately 90 km apart in southern Bangladesh was analyzed by X-ray absorption spectroscopy (XAS), total chemical analyses, chemical extractions, and electron probe microanalysis to establish the importance of authigenic pyrite as a sink for arsenic in the Bengal Basin. Authigenic framboidal and massive pyrite (median values 1500 and 3200 ppm As, respectively), is the principal arsenic residence in sediment from both boreholes. Although pyrite is dominant, ferric oxyhydroxides and secondary iron phases contain a large fraction of the sediment-bound arsenic between approximately 20 and 100 m, which is the depth range of wells containing the greatest amount of dissolved arsenic. The lack of pyrite in this interval is attributed to rapid sediment deposition and a low sulfur flux from riverine and atmospheric sources. The ability of deeper aquifers (>150 m) to produce ground water with low dissolved arsenic in southern Bangladesh reflects adequate sulfur supplies and sufficient time to redistribute the arsenic into pyrite during diagenesis.

Corneal Crosslinking With Rose Bengal and Green Light: Efficacy and Safety Evaluation.

PubMed

Zhu, Hong; Alt, Clemens; Webb, Robert H; Melki, Samir; Kochevar, Irene E

2016-09-01

To evaluate crosslinking of cornea in vivo using green light activation of Rose Bengal (RGX) and assess potential damaging effects of the green light on retina and iris. Corneas of Dutch belted rabbits were de-epithelialized, then stained with Rose Bengal and exposed to green light, or not further treated. Corneal stiffness was measured by uniaxial tensiometry. Re-epithelialization was assessed by fluorescein fluorescence. Keratocytes were counted on hematoxylin and eosin (H&E)-stained sections, and iris cell damage was assessed by lactate dehydrogenase staining. Thermal effects on the blood-retinal barrier (BRB) were assessed by fluorescein angiography and those on photoreceptors, retinal pigment epithelium (RPE), and choriocapillaris by light microscopy and transmission electron microscopy. RGX (10-min irradiation; 150 J/cm) increased corneal stiffness 1.9-fold on day 1 (1.25 ± 0.21 vs. 2.38 ± 0.59 N/mm; P = 0.036) and 2.8-fold compared with controls on day 28 (1.70 ± 0.74 vs. 4.95 ± 1.86 N/mm; P = 0.003). Keratocytes decreased only in the anterior stroma on day 1 (24.0 ± 3.0 vs. 3.67 ± 4.73, P = 0.003) and recovered by day 28 (37.7 ± 8.9 vs. 34.5 ± 2.4, P = 0.51). Iris cells were not thermally damaged. No evidence of BRB breakdown was detected on days 1 or 28. Retina from RGX-treated eyes seemed normal with RPE cells showing intact nuclei shielded apically by melanosomes, morphologically intact photoreceptor outer segments, normal outer nuclear layer thickness, and choriocapillaris containing intact erythrocytes. The substantial corneal stiffening produced by RGX together with the lack of significant effects on keratocytes and no evidence for retina or iris damage suggest that RGX-initiated corneal crosslinking may be a safe, rapid, and effective treatment.

Sensitivity of the Freshwater Plume to Winds in the Bay of Bengal

NASA Astrophysics Data System (ADS)

Sandeep, K. K.; Pant, V.; Rao, A. D.

2016-12-01

The role of winds in determining the dispersal pattern of freshwater plume in the Bay of Bengal (BoB) is investigated by using a high resolution three dimensional Regional Ocean Modelling System (ROMS) with realistic coastline and bathymetry. In the Indian Ocean, the Bay of Bengal (BoB) receives substantial freshwater by excess precipitation over evaporation and river runoff. Major rivers like Ganges, Brahmaputra, Mahanadi, Godavari, Krishna, Irrawaddy discharge freshwater volume in range between 1.5 x 1012 m3 and 1.83 x 1013 m3. About three-fourths of all riverine influx into the BoB occurs during the summer monsoon period from May until September. Multiple experiments are carried out with idealized winds replicating the seasonal wind patterns in the study region. Idealized winds of 8ms-1 with directions as southwesterly, southeasterly, northeasterly, and northerly used to force the model. Monthly climatology of river discharge from the seven major rivers in the domain are included by identifying their geographic locations. Model simulations show distinct behavioural patterns of the dispersal of riverine freshwater plumes in response to the direction of idealized winds. Comparison of different idealized experiments show the largest variability of the transport pathways in the northern BoB, where the largest freshwater volume is discharged through the rivers Ganges and Brahmaputra. Freshwater pool remains bounded to the northern-northeastern boundary of the BoB when forced with southwesterly winds, whereas the northeasterly winds produce a remarkable southward transport of freshwater along the east coast of India. These signatures of low salinity waters along the east coast of India have also been observed in observations during October-November. Further, the southeasterly winds produce strong mixing of low saline waters in the northern BoB. The northerly wind stress, however, limits the channelized flow of riverine freshwater either through the eastern or western

Injection order effects on efficacy of calcium chloride and sodium tripolyphosphate in controlling the pink color defect in uncured, intact turkey breast.

PubMed

Claus, James R; Sawyer, Christopher A; Vogel, Kurt D

2010-04-01

An experiment was conducted to test sequential injection of sodium tripolyphosphate (STP; 0.5% meat weight basis, mwb) followed by injection with or without addition of calcium chloride (CaCl(2), 500 ppm mwb), and to test the effect of post-injection delay prior to cooking. A second experiment evaluated the impact of injection order and delay time between independent addition of CaCl(2) (500 ppm mwb) and STP (0.5% mwb). Turkey was formulated without an added pink generating ligand (NONE), with nicotinamide (NIC; 0.1% mwb), or with sodium nitrite (NIT; 10 ppm mwb). A white colloid was observed in the extracellular space of treatments containing both STP and CaCl(2.) Addition of CaCl(2) decreased nitrosylhemochrome but did not reduce levels of nicotinamide hemochrome or CIE a(*) values. Injection order or delay between injections did not contribute to controlling the pink defect in cooked, intact turkey breast. Published by Elsevier Ltd.

Exxon Valdez oil spill. State/federal natural resource damage assessment. Impact of the oil spill on juvenile pink and chum salmon and their prey in critical nearshore habitats. Fish/shellfish study number 4. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1994-01-01

The objective of the study was to determine the impact of the Exxon Valdez oil spill on juvenile pink and chum salmon during their initial period of residency in nearshore marine habitats of western Prince William Sound. In oiled locations, both pink and chum salmon fry in the nearshore marine environment observations and laboratory experiments indicated that ingestion of whole oil or oil-contaminated prey was an important route of contamination.

The impact of weather on women's tendency to wear red or pink when at high risk for conception.

PubMed

Tracy, Jessica L; Beall, Alec T

2014-01-01

Women are particularly motivated to enhance their sexual attractiveness during their most fertile period, and men perceive shades of red, when associated with women, as sexually attractive. Building on this research, we recently found that women are more likely to wear reddish clothing when at peak fertility (Beall & Tracy, 2013), presumably as a way of increasing their attractiveness. Here, we first report results from a methodological replication, conducted during warmer weather, which produced a null effect. Investigating this discrepancy, we considered the impact of a potentially relevant contextual difference between previous research and the replication: current weather. If the red-dress effect is driven by a desire to increase one's sexual appeal, then it should emerge most reliably when peak-fertility women have few alternative options for accomplishing this goal (e.g., wearing minimal clothing). Results from re-analyses of our previously collected data and a new experiment support this account, by demonstrating that the link between fertility and red/pink dress emerges robustly in cold, but not warm, weather. Together, these findings suggest that the previously documented red-dress effect is moderated by current climate concerns, and provide further evidence that under certain circumstances red/pink dress is reliably associated with female fertility.

AF-6 is a positive modulator of the PINK1/parkin pathway and is deficient in Parkinson's disease

PubMed Central

Haskin, Joseph; Szargel, Raymonde; Shani, Vered; Mekies, Lucy N.; Rott, Ruth; Lim, Grace G. Y.; Lim, Kah-Leong; Bandopadhyay, Rina; Wolosker, Herman; Engelender, Simone

2013-01-01

Parkin E3 ubiquitin-ligase activity and its role in mitochondria homeostasis are thought to play a role in Parkinson's disease (PD). We now report that AF-6 is a novel parkin interacting protein that modulates parkin ubiquitin-ligase activity and mitochondrial roles. Parkin interacts with the AF-6 PDZ region through its C-terminus. This leads to ubiquitination of cytosolic AF-6 and its degradation by the proteasome. On the other hand, endogenous AF-6 robustly increases parkin translocation and ubiquitin-ligase activity at the mitochondria. Mitochondrial AF-6 is not a parkin substrate, but rather co-localizes with parkin and enhances mitochondria degradation through PINK1/parkin-mediated mitophagy. On the other hand, several parkin and PINK1 juvenile disease-mutants are insensitive to AF-6 effects. AF-6 is present in Lewy bodies and its soluble levels are strikingly decreased in the caudate/putamen and substantia nigra of sporadic PD patients, suggesting that decreased AF-6 levels may contribute to the accumulation of dysfunctional mitochondria in the disease. The identification of AF-6 as a positive modulator of parkin translocation to the mitochondria sheds light on the mechanisms involved in PD and underscores AF-6 as a novel target for future therapeutics. PMID:23393160

The effect of denture cleansing solutions on the retention of pink locator attachments after multiple pulls: an in vitro study.

PubMed

You, Wenguang; Masri, Radi; Romberg, Elaine; Driscoll, Carl F; You, Tao

2011-08-01

The effect of denture cleansing solutions and multiple pulls on the retention of pink Locator patrices was studied. Five groups of pink Locator attachments (3.0 lb. Light Retention replacement patrix attachments; five in each group) were soaked for the equivalent of 6 months of clinical use in the following solutions: water (control), Efferdent, Polident Overnight, 6.15% sodium hypochlorite (NaOCL, 1:10 dilution), and Listerine mouthwash. A universal testing machine set at a 2 in/min crosshead speed was used to perform 548 pulls (548 cycles of insertion and removal). The reduction in load to dislodgement (retention) after the initial pull and the final pull and the percent reduction in retention after 6 months were compared between the groups using a one-way ANOVA followed by Tukey's Honestly Significant Difference (HSD) Test (α= 0.05). Denture cleansing solutions significantly reduced the retentive values of pink Locator attachments after the initial pull (F = 17.435, p < 0.0001). The retentive values of Efferdent, Listerine, Polident Overnight, and water were significantly higher than the retentive value of the attachments soaked in NaOCl. After 6 months of simulated use (548 pulls), the four denture cleansing solutions had significant effects on the retentive values of pink Locator attachments (F = 5.855, p = 0.003). The retentive values for attachments soaked in NaOCl (7.29 ± 1.0 N) were significantly lower than those of attachments soaked in Listerine (15.82 ± 4.7 N) and in Polident Overnight (14.41 ± 3.6 N). These cleansing solutions also had a significant effect on the percentage of retention lost (F = 3.271, p = 0.032). The loss of retention in attachments soaked in Listerine (29 ± 9%) was significantly lower than attachments soaked in water (53 ± 12%). The loss of retention in attachments soaked in Efferdent was 49 ± 9%; in Polident Overnight, 34 ± 18%; and in NaOCl, 42 ± 11%. There was no significant difference in the percentage of retention loss

Iodine-xenon studies of Allende inclusions - Eggs and the Pink Angel

NASA Technical Reports Server (NTRS)

Swindle, T. D.; Caffee, M. W.; Hohenberg, C. M.

1988-01-01

The I-Xe systems of six Allende inclusions (five Eggs and the Pink Angel) appear to have been altered by nonnebular secondary processes. Evidence for this includes temperature-ordered variations in the initial I isotopic composition within several objects (with older apparent I-Xe ages associated with higher extraction temperatures) and the absence of primitive I-Xe ages. The span of apparent ages seen in Allende objects (10 Myr or more) is probably too long to reflect any nebular process, so at least some alteration probably occurred ont the parent body. The range in initial (Pu-244)/(U-238) ratios for the Eggs (0.003-0.014) includes the current best estimates of the bulk solar system value (0.004-0.007). For Egg 3, the Pu/U ratio varies by a factor of two between extractions, probably the result of fractionation of Pu from U among different phases.

Genotype-phenotype relations for the Parkinson's Disease genes Parkin, PINK1, DJ1: MDSGene Systematic Review.

PubMed

Kasten, Meike; Hartmann, Corinna; Hampf, Jennie; Schaake, Susen; Westenberger, Ana; Vollstedt, Eva-Juliane; Balck, Alexander; Domingo, Aloysius; Vulinovic, Franca; Dulovic, Marija; Zorn, Ingo; Madoev, Harutyun; Zehnle, Hanna; Lembeck, Christina M; Schawe, Leopold; Reginold, Jennifer; Huang, Jana; König, Inke R; Bertram, Lars; Marras, Connie; Lohmann, Katja; Lill, Christina M; Klein, Christine

2018-04-11

This first comprehensive MDSGene review is devoted to the 3 autosomal recessive Parkinson's disease forms: PARK-Parkin, PARK-PINK1, and PARK-DJ1. It followed MDSGene's standardized data extraction protocol and screened a total of 3652 citations and is based on fully curated phenotypic and genotypic data on >1100 patients with recessively inherited PD because of 221 different disease-causing mutations in Parkin, PINK1, or DJ1. All these data are also available in an easily searchable online database (www.mdsgene.org), which also provides descriptive summary statistics on phenotypic and genetic data. Despite the high degree of missingness of phenotypic features and unsystematic reporting of genotype data in the original literature, the present review recapitulates many of the previously described findings including early onset (median age at onset of ∼30 years for carriers of at least 2 mutations in any of the 3 genes) of an overall clinically typical form of PD with excellent treatment response, dystonia and dyskinesia being relatively common and cognitive decline relatively uncommon. However, when comparing actual data with common expert knowledge in previously published reviews, we detected several discrepancies. We conclude that systematic reporting of phenotypes is a pressing need in light of increasingly available molecular genetic testing and the emergence of first gene-specific therapies entering clinical trials. © 2018 International Parkinson and Movement Disorder Society. © 2018 International Parkinson and Movement Disorder Society.

IODP Expedition 354 to the Bengal Fan: a Neogene record of Himalayan erosion. Implications on the carbon cycle

NASA Astrophysics Data System (ADS)

France-Lanord, Christian; Spiess, Volkard; Galy, Albert; Galy, Valier; Huyghe, Pascale; Klaus, Adam; IODP Expedition 354 Scientists

2016-04-01

Bengal Fan Expedition 354 drilled an E-W transect in the middle fan at 8°N to investigate interactions between the growth of the Himalaya, the development of the Indian monsoon, and processes affecting the carbon cycle. A comprehensive record of turbiditic deposition between the Late Oligocene and Holocene was drilled over a seven sites E-W transect at 8°N. Shipboard results reveal that the chemical and mineralogical compositions of turbiditic sediments cored across the transect are relatively stable throughout the Neogene. By comparison to modern river sediment compositions (Lupker et al. ref), they reveal a weak intensity of chemical weathering without marked variation through time. Clay assemblages are dominated by illite and chlorite with minor proportions of newly formed clays. This differs from the distal fan record (Leg 116) where the Late Miocene and Pliocene turbidites show high weathering signatures and smectite rich clay assemblage. This difference im plies that the distal fan record does not reflect to an evolution of the source erosion. Rather it is controlled by a change in sediment transport within the fan. Shipboard estimates of organic carbon loading and behaviour resemble observations made in the modern Ganga-Brahmaputra river sediments, suggesting efficient terrestrial organic carbon burial in the Bengal Fan [1]. Preliminary observations support the idea that Himalayan erosion has consumed atmospheric CO2 through the burial of organic carbon, more than by silicate weathering. The main evolution observed in Expedition 354 record is the content of detrital carbonate that is persistent through the Neogene but appears to show a consistent decreasing trend from 8-10% during the Miocene to 3-6% during the Pleistocene and Pliocene. Also, a prominent feature of Miocene silt and sand beds is the higher abundance of plant fragments compared to younger sediments. Together these observations reveal changes in the sediment sources and erosion conditions of

Mark Tracking: Position/orientation measurements using 4-circle mark and its tracking experiments

NASA Technical Reports Server (NTRS)

Kanda, Shinji; Okabayashi, Keijyu; Maruyama, Tsugito; Uchiyama, Takashi

1994-01-01

Future space robots require position and orientation tracking with visual feedback control to track and capture floating objects and satellites. We developed a four-circle mark that is useful for this purpose. With this mark, four geometric center positions as feature points can be extracted from the mark by simple image processing. We also developed a position and orientation measurement method that uses the four feature points in our mark. The mark gave good enough image measurement accuracy to let space robots approach and contact objects. A visual feedback control system using this mark enabled a robot arm to track a target object accurately. The control system was able to tolerate a time delay of 2 seconds.

Compound-Specific Radiocarbon Dating Reveals the Age Distribution of Plant-Wax Biomarkers Exported to the Bengal Fan

NASA Astrophysics Data System (ADS)

Galy, V.; French, K. L.; Hein, C. J.; Haghipour, N.; Wacker, L.; Kudrass, H.; Eglinton, T. I.

2017-12-01

The stable isotope composition of leaf-wax compounds preserved in lacustrine and marine sediments has been widely used to reconstruct terrestrial paleo-environments. However, the timescales of plant-wax storage in continental reservoirs before riverine export are not well known, representing a key uncertainty in paleo-environment studies. We couple numerical models with bulk and leaf-wax fatty acid organic 13C and 14C signatures hosted in a high-deposition-rate sediment core from the Bengal shelf canyon in order to estimate storage timescales within the Ganges-Brahmaputra catchment area. The fatty acid 14C record reveals a muted nuclear weapons bomb spike, requiring that the Ganges-Brahmaputra river system exports a mixture of young and old (pre-aged) leaf-wax compounds. According to numerical simulations, 79-83% of the leaf-wax fatty acids in this core are sourced from continental reservoirs that store organic carbon on an average of 1000-1200 calendar years, while the remainder has an average age of 15 years. These results demonstrate that a majority of the leaf-wax compounds produced in the Ganges-Brahmaputra river basin was stored in soils, floodplains, and wetlands prior to its export to the Bengal Fan. We will discuss the implications of these findings for plant-wax based paleoenvironmental records.

CCN concentrations and BC warming influenced by maritime ship emitted aerosol plumes over southern Bay of Bengal.

PubMed

Ramana, M V; Devi, Archana

2016-08-02

Significant quantities of carbon soot aerosols are emitted into pristine parts of the atmosphere by marine shipping. Soot impacts the radiative balance of the Earth-atmosphere system by absorbing solar-terrestrial radiation and modifies the microphysical properties of clouds. Here we examined the impact of black carbon (BC) on net warming during monsoon season over southern Bay-of-Bengal, using surface and satellite measurements of aerosol plumes from shipping. Shipping plumes had enhanced the BC concentrations by a factor of four around the shipping lane and exerted a strong positive influence on net warming. Compiling all the data, we show that BC atmospheric heating rates for relatively-clean and polluted-shipping corridor locations to be 0.06 and 0.16 K/day respectively within the surface layer. Emissions from maritime ships had directly heated the lower troposphere by two-and-half times and created a gradient of around 0.1 K/day on either side of the shipping corridor. Furthermore, we show that ship emitted aerosol plumes were responsible for increase in the concentration of cloud condensation nuclei (CCN) by an order of magnitude that of clean air. The effects seen here may have significant impact on the monsoonal activity over Bay-of-Bengal and implications for climate change mitigation strategies.

Marking Time

ERIC Educational Resources Information Center

Foster, Colin

2011-01-01

Teachers say that they would gladly teach a day in the classroom if at the end of the day they could leave and have no marking. There is a common staffroom perception that mathematics teachers have it easy when it comes to marking. In arts subjects, setting an essay can be a fairly straightforward matter--a one-line question may suffice--but…

Growth and development of the pink bollworm, Pectinophora gossypiella (Lepidoptera: Gelechiidae), on bolls of cotton grown in enriched carbon dioxide atmospheres

DOE Office of Scientific and Technical Information (OSTI.GOV)

Akey, D.H.; Kimball, B.A.; Mauney, J.R.

1988-06-01

The pink bollworm, Pectinophora gossypiella (Saunders), was reared on the bolls of cotton plants grown in CO/sub 2/-enriched (649 ..mu..l/liter) and ambient CO/sub 2/ (371 ..mu..l/liter) chambers and in two open field plots, one with free-air CO/sub 2/ enrichment (522 ..mu..l/liter) and one without enrichment (ambient CO/sub 2/, 360 ..mu..l/liter). The effects of increased CO/sub 2/ levels on growth and development were examined. There was no difference in pupal weights of pink bollworm raised on CO/sub 2/-enriched cotton compared with those raised on ambient CO/sub 2/ cotton (26.80 versus 26.64 mg, respectively). Also, there was no difference in developmental timemore » (21-27 d). Analysis of percent seed damage by larvae showed no differences between CO/sub 2/-enriched and ambient CO/sub 2/ cotton. These results were attributed to the nutritional qualities of the seed remaining the same (specifically the carbon/nitrogen ratio) despite CO/sub 2/ and photosynthetic changes in the plant.« less

High arsenic groundwater: mobilization, metabolism and mitigation--an overview in the Bengal Delta Plain.

PubMed

Bhattacharyya, Rupa; Chatterjee, Debashis; Nath, Bibhash; Jana, Joydev; Jacks, Gunnar; Vahter, Marie

2003-11-01

The widespread occurrence of high inorganic arsenic in natural waters is attributed to human carcinogen and is identified as a major global public health issue. The scale of the problem in terms of population exposure (36 million) and geographical area coverage (173 x 10(3) Km2) to high arsenic contaminated groundwater (50-3200 microgL(-1)) compared to the National drinking water standard (50 microgL(-1)) and WHO recommended provisional limit (10 microgL(-1)) is greatest in the Holocene alluvium and deltaic aquifers of the Bengal Delta Plain (Bangladesh and West Bengal, India). This large-scale 'natural' high arsenic groundwater poses a great threat to human health via drinking water. Mobilization, metabolism and mitigation issues of high arsenic groundwater are complex and need holistic approach for sustainable development of the resource. Mobilization depends on the redox geochemistry of arsenic that plays a vital role in the release and subsequent transport of arsenic in groundwater. Metabolism narrates the biological response vis-à-vis clinical manifestations of arsenic due to various chemical and biological factors. Mitigation includes alternative source for safe drinking water supply. Drinking water quality regulatory standards as well as guidelines are yet to cover risk assessments for such metal toxicity. Lowering of the ingested inorganic arsenic level and introduction of newer treatment options (implementation of laterite, the natural material) to ensure safe water supply (arsenic free and/or low arsenic within permissible limit) are the urgent need to safe guard the mass arsenic poisoning and internal arsenic related health problems.

Improving Marking Quality through a Taxonomy of Mark Schemes

ERIC Educational Resources Information Center

Ahmed, Ayesha; Pollitt, Alastair

2011-01-01

At the heart of most assessments lies a set of questions, and those who write them must achieve "two" things. Not only must they ensure that each question elicits the kind of performance that shows how "good" pupils are at the subject, but they must also ensure that each mark scheme gives more marks to those who are…

Morpho-tectonic depression and early holocene land-ocean interaction vis-à-vis trace metals adsorption in sediment and groundwater contamination a case study from the Bengal delta, Bangladesh

NASA Astrophysics Data System (ADS)

Khan, A. A.; Hoque, M. A.; Ali, M.; Hasan, M. A.

2003-05-01

The query mires the geoenvironmental status of the Bengal delta, especially the physico-chemical status of the Holocene sedimentation. Fluvio-deltaic Holocene sediments have developed potential groundwater aquifer system in the Bengal delta. Groundwater contamination by arsenic bas emerged as one of the most serious health hazard. The occurrence and distribution of high arsenic as well as other trace metals viz., Co, Cu, Cr, Ti, Mo, Ni, Zn etc are restricted within the morphotectonic depressions and occur in the shallow aquifer (~70m) of transgressive system tract. Moreover, arsenic hot spots are found to be related with the Holocene land-ocean interface lobes. These interface lobes are also susceptible to other trace metals enrichment and subsequent sediment-water contamination. The sedimentary structures and types of deposition bear the signatures of transgressive phase those are intrinsically associated with the trace metals enrichment. The Bengal delta, the mighty gateway to the sea in the world carries the largest load of the suspended matters those adsorbed and/or redeposited in the land-ocean interface through flocculation and accumulation processes. The adsorbed elements are released from the sediments in reducing environment through iron and manganese desolution.

Evaluation of the sustainability of deep groundwater as an arsenic-safe resource in the Bengal Basin

USGS Publications Warehouse

Michaela, Holly A.; Voss, Clifford I.

2008-01-01

Tens of millions of people in the Bengal Basin region of Bangladesh and India drink groundwater containing unsafe concentrations of arsenic. This high-arsenic groundwater is produced from shallow (<100 m) depths by domestic and irrigation wells in the Bengal Basin aquifer system. The government of Bangladesh has begun to install wells to depths of >150 m where groundwater arsenic concentrations are nearly uniformly low, and many more wells are needed, however, the sustainability of deep, arsenic-safe groundwater has not been previously assessed. Deeper pumping could induce downward migration of dissolved arsenic, permanently destroying the deep resource. Here, it is shown, through quantitative, large-scale hydrogeologic analysis and simulation of the entire basin, that the deeper part of the aquifer system may provide a sustainable source of arsenic-safe water if its utilization is limited to domestic supply. Simulations provide two explanations for this result: deep domestic pumping only slightly perturbs the deep groundwater flow system, and substantial shallow pumping for irrigation forms a hydraulic barrier that protects deeper resources from shallow arsenic sources. Additional analysis indicates that this simple management approach could provide arsenic-safe drinking water to >90% of the arsenic-impacted region over a 1,000-year timescale. This insight may assist water-resources managers in alleviating one of the world's largest groundwater contamination problems.

Orographic control of the Bay of Bengal cold pool rainfall

NASA Astrophysics Data System (ADS)

Arushi, P. V.; Chakraborty, Arindam; Nanjundiah, Ravi S.

2017-12-01

In boreal summer (June-September), most of the Indian land and its surroundings experience rainrates exceeding 6 mm day^{-1} with considerable spatial variability. Over southern Bay of Bengal (BoB) along the east coast of the Indian peninsula (henceforth referred to as the Bay of Bengal cold pool or BoB-CP), the rain intensity is significantly lower (<2 mm day^{-1}) than its surroundings. This low rainfall occurs despite the fact that the sea surface temperature in this region is well above the threshold for convection and the mean vorticity of the boundary layer is cyclonic with a magnitude comparable to that over the central Indian monsoon trough where the rainrate is about 10 mm day^{-1}. It is also noteworthy that the seasonal cycle of convection over the BoB-CP shows a primary peak in November and a secondary peak in May. This is in contrast to the peak in June-July over most of the oceanic locations surrounding the BoB-CP. In this study, we investigate the role of the Western Ghat (WG) mountains in an Atmospheric General Circulation Model (AGCM) to understand this paradox. Decade-long simulations of the AGCM were carried out with varying (from 0 to 2 times the present) heights of the WG. We find that the lee waves generated by the strong westerlies in the lower troposphere in the presence of the WG mountains cause descent over the BoB-CP. Thus, an increase in the height of the WG strengthens the lee waves and reduces rainfall over the BoB-CP. More interestingly in the absence of WG mountains, the BoB-CP shows a rainfall maxima in the boreal summer similar to that over its surrounding oceans. The WG also impacts the climate over the middle and high latitude regions by modifying the upper tropospheric circulation. The results of this study underline the importance of narrow mountains like the WG in the tropics in determining the global climate and possibly calls for a better representation of such mountains in climate models.

The effects of PPR on the reproductive health of Black Bengal goats and the possible role played by oxidative stress.

PubMed

Kumar, Pankaj; Dey, Amitava; Kumar, Abhay; Ray, Pradeep Kumar; Chandran, Poolangulam Chinnakkan; Kumari, Rashmi Rekha; Kumar, Manish

2018-03-28

Outbreaks of Peste des petits ruminants (PPR) viral disease in Black Bengal goats were investigated from the middle Indo-Gangetic Plains of India. Clinical profile of PPR-affected flocks was recorded from four different outbreak sites of the region. The PPR outbreak was diagnosed serologically using commercially available sandwich ELISA kit. Relatively, low mortality rate (mean 26.75%) for PPR outbreak was recorded due to the endemic status of the disease. To understand the role of oxidative stress in PPR virus pathogenesis, various oxidant and antioxidant parameters in goats infected with PPR were estimated and compared with the uninfected/healthy goats of the same flock. The measured high level of pro-oxidant malondialdehyde (MDA) obtained from lipid peroxidation along with lower levels of anti-oxidants viz. superoxide dismutase (SOD), glutathione peroxidase (GPx) and catalase (CAT) in PPR-affected Black Bengal goats suggests oxidative stress as one of the mechanism of pathogenesis of PPR virus. In addition, the correlation of oxidative stress due to PPR and the resulting reproductive disorders in the female goats were evaluated. The abortion in pregnant does observed during PPR outbreak was proportional to debility and oxidative stress manifested during PPR infection. The reproductive performance of recovered female goats in the period of 18 months of monitoring was significantly compromised in terms of kidding and twinning frequency. The mortality rate in kids born from PPR-recovered goats was significantly higher compared to those from health goats in the first 9 months post-recovery. From the present study, it may be concluded that together with the PPR virus, infection in goats and the resulting oxidative stress play a vital role for abortion and reduced post-reproductive performance in Black Bengal female goat.

Sources of low-arsenic groundwater in the Bengal Basin: investigating the influence of the last glacial maximum palaeosol using a 115-km traverse across Bangladesh

NASA Astrophysics Data System (ADS)

Hoque, M. A.; McArthur, J. M.; Sikdar, P. K.

2014-05-01

Pollution of groundwater in the Bengal Basin (Bangladesh and West Bengal, India) by arsenic (As) puts at risk the health of more than 100 million consumers. Using 1,580 borehole lithological logs and published hydrochemistry on 2,387 wells, it was predicted that low-As (<10 μg/L) groundwater exists, in palaeo-interfluvial aquifers of brown sand capped by a protective palaeosol, beneath at least 45,000 km2 of the Bengal Basin. The aquifers were predicted to be at a depth of as little as 25 m below ground level (mbgl), and typically no more than 50 mbgl. The predictions were confirmed along an east-west traverse 115 km in length (i.e. across half of Bangladesh) by drilling 28 new boreholes to 91-m depth to reveal subsurface sedimentology, and by mapping As distribution in groundwater. The aquifers identified occur at typically <40 mbgl and so are accessible with local drilling methods. A protective palaeosol that caps the palaeo-interfluvial aquifers prevents downward movement into them of As-polluted groundwater present in shallower palaeo-channel aquifers and ensures that the palaeo-interfluvial aquifers will yield low-As groundwater for the foreseeable future. Their use, in place of the shallower As-polluted palaeo-channel aquifers, would rapidly mitigate the health risks from consumption of As-polluted groundwater.

Red, Purple and Pink: The Colors of Diffusion on Pinterest

PubMed Central

Bakhshi, Saeideh; Gilbert, Eric

2015-01-01

Many lab studies have shown that colors can evoke powerful emotions and impact human behavior. Might these phenomena drive how we act online? A key research challenge for image-sharing communities is uncovering the mechanisms by which content spreads through the community. In this paper, we investigate whether there is link between color and diffusion. Drawing on a corpus of one million images crawled from Pinterest, we find that color significantly impacts the diffusion of images and adoption of content on image sharing communities such as Pinterest, even after partially controlling for network structure and activity. Specifically, Red, Purple and pink seem to promote diffusion, while Green, Blue, Black and Yellow suppress it. To our knowledge, our study is the first to investigate how colors relate to online user behavior. In addition to contributing to the research conversation surrounding diffusion, these findings suggest future work using sophisticated computer vision techniques. We conclude with a discussion on the theoretical, practical and design implications suggested by this work—e.g. design of engaging image filters. PMID:25658423

Red, purple and pink: the colors of diffusion on pinterest.

PubMed

Bakhshi, Saeideh; Gilbert, Eric

2015-01-01

Many lab studies have shown that colors can evoke powerful emotions and impact human behavior. Might these phenomena drive how we act online? A key research challenge for image-sharing communities is uncovering the mechanisms by which content spreads through the community. In this paper, we investigate whether there is link between color and diffusion. Drawing on a corpus of one million images crawled from Pinterest, we find that color significantly impacts the diffusion of images and adoption of content on image sharing communities such as Pinterest, even after partially controlling for network structure and activity. Specifically, Red, Purple and pink seem to promote diffusion, while Green, Blue, Black and Yellow suppress it. To our knowledge, our study is the first to investigate how colors relate to online user behavior. In addition to contributing to the research conversation surrounding diffusion, these findings suggest future work using sophisticated computer vision techniques. We conclude with a discussion on the theoretical, practical and design implications suggested by this work-e.g. design of engaging image filters.

Elemental marking of arthropod pests in agricultural systems: single and multigenerational marking

Treesearch

Jane Leslie Hayes

1991-01-01

Use of elemental markers to study movement of arthropod pests of field crops is reviewed. Trace elements, rubidium (Rb) and cesium (Cs), have provided a nondisruptive method of marking natural adult populations via developmental stage consumption of treated host plants. Multigenerational marking occurs with the transfer of elemental markers from marked adults to...

14 CFR 45.10 - Marking.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 14 Aeronautics and Space 1 2012-01-01 2012-01-01 false Marking. 45.10 Section 45.10 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT IDENTIFICATION AND REGISTRATION MARKING Marking of Products and Articles § 45.10 Marking. No person may mark a product or article...

14 CFR 45.10 - Marking.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 14 Aeronautics and Space 1 2014-01-01 2014-01-01 false Marking. 45.10 Section 45.10 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT IDENTIFICATION AND REGISTRATION MARKING Marking of Products and Articles § 45.10 Marking. No person may mark a product or article...

14 CFR 45.10 - Marking.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Marking. 45.10 Section 45.10 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT IDENTIFICATION AND REGISTRATION MARKING Marking of Products and Articles § 45.10 Marking. No person may mark a product or article...

14 CFR 45.10 - Marking.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 14 Aeronautics and Space 1 2013-01-01 2013-01-01 false Marking. 45.10 Section 45.10 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT IDENTIFICATION AND REGISTRATION MARKING Marking of Products and Articles § 45.10 Marking. No person may mark a product or article...

Increased frequency of DNA deletions in pink-eyed unstable mice carrying a mutation in the Werner syndrome gene homologue.

PubMed

Lebel, Michel

2002-01-01

Werner syndrome (WS) is a rare autosomal recessive disorder characterized by genomic instability and the premature onset of a number of age-related diseases, including cancers. Accumulating evidence indicates that the WS gene product is involved in resolving aberrant DNA structures that may arise during the process of DNA replication and/or transcription. To estimate the frequency of DNA deletions directly in the skin of mouse embryos, mice with a deletion of part of the murine WRN helicase domain were created. These mutant mice were then crossed to the pink-eyed unstable animals, which have a 70 kb internal duplication at the pink-eyed dilution (p) gene. This report indicates that the frequency of deletion of the duplicated sequence at the p locus is elevated in mice with a mutation in the WRN allele when compared with wild-type mice. In addition, the inhibitor of topoisomerase I camptothecin also increases the frequency of deletion at the p locus. This frequency is even more elevated in WRN mutant mice treated with camptothecin. In contrast, while the inhibition of poly(ADP-ribose) polymerase (PARP) activity by 3-aminobenzamide increases the frequency of DNA deletion, mutant WRN mice are not significantly more sensitive to the inhibition of PARP activity than wild-type animals.

A meridional dipole in premonsoon Bay of Bengal tropical cyclone activity induced by ENSO: TROPICAL CYCLONES, MONSOON AND ENSO

DOE Office of Scientific and Technical Information (OSTI.GOV)

Balaguru, Karthik; Leung, L. Ruby; Lu, Jian

2016-06-27

Analysis of Bay of Bengal tropical cyclone (TC) track data for the month of May during 1980-2013 reveals a meridional dipole in TC intensification: TC intensification rates increased in the northern Bay and decreased in the southern Bay. The dipole was driven by an increase in low-level vorticity and atmospheric humidity in the northern Bay, making the environment more favorable for TC intensification, and enhanced vertical wind shear in the southern Bay, tending to reduce TC development. These environmental changes were associated with a strengthening of the monsoon circulation for the month of May, driven by a La Nin˜a-like shiftmore » in tropical Pacific SSTs andassociated tropical wave dynamics. Analysis of a suite of climate models fromthe CMIP5 archive for the 150-year historical period shows that most models correctly reproduce the link between ENSO and Bay of Bengal TC activity through the monsoon at interannual timescales. Under the RCP 8.5 scenario the same CMIP5 models produce an El Nin˜o like warming trend in the equatorial Pacific, tending to weaken the monsoon circulation. These results suggest« less

Characterization of a New Pink-Fruited Tomato Mutant Results in the Identification of a Null Allele of the SlMYB12 Transcription Factor.

PubMed

Fernandez-Moreno, Josefina-Patricia; Tzfadia, Oren; Forment, Javier; Presa, Silvia; Rogachev, Ilana; Meir, Sagit; Orzaez, Diego; Aharoni, Aspah; Granell, Antonio

2016-07-01

The identification and characterization of new tomato (Solanum lycopersicum) mutants affected in fruit pigmentation and nutritional content can provide valuable insights into the underlying biology, as well as a source of new alleles for breeding programs. To date, all characterized pink-pigmented tomato fruit mutants appear to result from low SlMYB12 transcript levels in the fruit skin. Two new mutant lines displaying a pink fruit phenotype (pf1 and pf2) were characterized in this study. In the pf mutants, SlMYB12 transcripts accumulated to wild-type levels but exhibited the same truncation, which resulted in the absence of the essential MYB activation domain coding region. Allelism and complementation tests revealed that both pf mutants were allelic to the y locus and showed the same recessive null allele in homozygosis: Δy A set of molecular and metabolic effects, reminiscent of those observed in the Arabidopsis (Arabidopsis thaliana) myb11 myb12 myb111 triple mutant, were found in the tomato Δy mutants. To our knowledge, these have not been described previously, and our data support the idea of their being null mutants, in contrast to previously described transcriptional hypomorphic pink fruit lines. We detected a reduction in the expression of several flavonol glycosides and some associated glycosyl transferases. Transcriptome analysis further revealed that the effects of the pf mutations extended beyond the flavonoid pathway into the interface between primary and secondary metabolism. Finally, screening for Myb-binding sites in the candidate gene promoter sequences revealed that 141 of the 152 co-down-regulated genes may be direct targets of SlMYB12 regulation. © 2016 American Society of Plant Biologists. All Rights Reserved.

Corneal Resistance to Keratolysis After Collagen Crosslinking With Rose Bengal and Green Light.

PubMed

Fadlallah, Ali; Zhu, Hong; Arafat, Samer; Kochevar, Irene; Melki, Samir; Ciolino, Joseph B

2016-12-01

The purpose of this study was to evaluate the resistance to degradation by collagenase A of corneas that have been crosslinked with Rose Bengal and green light (RGX). The ex vivo crosslinking procedure was performed on enucleated rabbit corneas. Corneas were deepithelialized after applying 30% alcohol. Corneas were stained with Rose Bengal (RB, 0.1%) for 2 minutes and then exposed to green light (532 nm) at 0.25 W/cm2 for times to deliver doses of 50, 100, 150, or 200 J/cm2 (n = 5 per group). Five corneas were pretreated with riboflavin solution (0.1% riboflavin) for 15 minutes and irradiated with ultraviolet A (UVA) light (370 nm, 3 mW/cm2) for 30 minutes. Five corneas underwent only de-epithelialization and were otherwise untreated. Five corneas were stained with RB without light exposure. The central corneas of each group was removed with a 8.5-mm trephine and incubated at 37°C in 0.3% collagenase A solution. Time to dissolution of each cornea was compared across treatments. Corneas treated with RGX were treated with light fluences of 50, 100, 150, and 200 J/cm2; these corneas dissolved completely at 8.3 ± 1.2, 11.1 ± 1.4, 12.4 ± 1.7, and 15.7 ± 1.8 hours, respectively. Corneas treated by riboflavin and UVA light dissolved at 15.7 ± 1.7 hours, and nontreated corneas dissolved at 6.1 ± 1.3 hours. Corneas treated with only RB (no green light) dissolved at 9.3 ± 1.7 hours. Compared with the untreated corneas, all of the RB groups and the riboflavin-UVA-treated group of corneas degraded statistically significantly slower than untreated corneas (P < 0.05). Crosslinking with RGX increased corneal resistance to digestion by collagenase comparable to that produced by riboflavin and UVA treatment.

Spatial variability of upper ocean POC export in the Bay of Bengal and the Indian Ocean determined using particle-reactive 234Th

NASA Astrophysics Data System (ADS)

Subha Anand, S.; Rengarajan, R.; Sarma, V. V. S. S.; Sudheer, A. K.; Bhushan, R.; Singh, S. K.

2017-05-01

The northern Indian Ocean is globally significant for its seasonally reversing winds, upwelled nutrients, high biological production, and expanding oxygen minimum zones. The region acts as sink and source for atmospheric CO2. However, the efficiency of the biological carbon pump to sequester atmospheric CO2 and export particulate organic carbon from the surface is not well known. To quantify the upper ocean carbon export flux and to estimate the efficiency of biological carbon pump in the Bay of Bengal and the Indian Ocean, seawater profiles of total 234Th were measured from surface to 300 m depth at 13 stations from 19.9°N to 25.3°S in a transect along 87°E, during spring intermonsoon period (March-April 2014). Results showed enhanced in situ primary production in the equatorial Indian Ocean and the central Bay of Bengal and varied from 13.2 to 173.8 mmol C m-2 d-1. POC export flux in this region varied from 0 to 7.7 mmol C m-2 d-1. Though high carbon export flux was found in the equatorial region, remineralization of organic carbon in the surface and subsurface waters considerably reduced organic carbon export in the Bay of Bengal. Annually recurring anticyclonic eddies enhanced organic carbon utilization and heterotrophy. Oxygen minimum zone developed due to stratification and poor ventilation was intensified by subsurface remineralization. 234Th-based carbon export fluxes were not comparable with empirical statistical model estimates based on primary production and temperature. Region-specific refinement of model parameters is required to accurately predict POC export fluxes.

Arsenic Incorporation Into Authigenic Pyrite, Bengal Basin Sediment, Bangladesh

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lowers, H.A.; Breit, G.N.; Foster, A.L.

2007-07-10

Sediment from two deep boreholes ({approx}400 m) approximately 90 km apart in southern Bangladesh was analyzed by X-ray absorption spectroscopy (XAS), total chemical analyses, chemical extractions, and electron probe microanalysis to establish the importance of authigenic pyrite as a sink for arsenic in the Bengal Basin. Authigenic framboidal and massive pyrite (median values 1500 and 3200 ppm As, respectively), is the principal arsenic residence in sediment from both boreholes. Although pyrite is dominant, ferric oxyhydroxides and secondary iron phases contain a large fraction of the sediment-bound arsenic between approximately 20 and 100 m, which is the depth range of wellsmore » containing the greatest amount of dissolved arsenic. The lack of pyrite in this interval is attributed to rapid sediment deposition and a low sulfur flux from riverine and atmospheric sources. The ability of deeper aquifers (>150 m) to produce ground water with low dissolved arsenic in southern Bangladesh reflects adequate sulfur supplies and sufficient time to redistribute the arsenic into pyrite during diagenesis.« less

Mark-recapture and mark-resight methods for estimating abundance with remote cameras: a carnivore case study

USGS Publications Warehouse

Alanso, Robert S.; McClintock, Brett T.; Lyren, Lisa M.; Boydston, Erin E.; Crooks, Kevin R.

2015-01-01

Abundance estimation of carnivore populations is difficult and has prompted the use of non-invasive detection methods, such as remotely-triggered cameras, to collect data. To analyze photo data, studies focusing on carnivores with unique pelage patterns have utilized a mark-recapture framework and studies of carnivores without unique pelage patterns have used a mark-resight framework. We compared mark-resight and mark-recapture estimation methods to estimate bobcat (Lynx rufus) population sizes, which motivated the development of a new "hybrid" mark-resight model as an alternative to traditional methods. We deployed a sampling grid of 30 cameras throughout the urban southern California study area. Additionally, we physically captured and marked a subset of the bobcat population with GPS telemetry collars. Since we could identify individual bobcats with photos of unique pelage patterns and a subset of the population was physically marked, we were able to use traditional mark-recapture and mark-resight methods, as well as the new “hybrid” mark-resight model we developed to estimate bobcat abundance. We recorded 109 bobcat photos during 4,669 camera nights and physically marked 27 bobcats with GPS telemetry collars. Abundance estimates produced by the traditional mark-recapture, traditional mark-resight, and “hybrid” mark-resight methods were similar, however precision differed depending on the models used. Traditional mark-recapture and mark-resight estimates were relatively imprecise with percent confidence interval lengths exceeding 100% of point estimates. Hybrid mark-resight models produced better precision with percent confidence intervals not exceeding 57%. The increased precision of the hybrid mark-resight method stems from utilizing the complete encounter histories of physically marked individuals (including those never detected by a camera trap) and the encounter histories of naturally marked individuals detected at camera traps. This new estimator

Clinicohaematological profile of aplastic anaemia in a rural medical college of Northern West Bengal.

PubMed

Chakrabarti, Sudipta; Goswami, Bidyut Krishna; Paul, Prabir Chandra; Sarkar, Supriya; Mondal, Srikrishna; Das, Shikha

2013-10-01

There is a scarcity of clinical data in the field of aplastic anaemia from rural India. Present study was conducted in North Bengal Medical College to find out the clinicohaematological profile and the possible aetiological factors in patients with aplastic anaemia. The study population (n = 83) included 21 children with male to female ratio 4.93:1. Weakness was present in all cases and pallor was present in 74.70% cases. Fever, bleeding episodes and localised infection were found in 55.42%, 48.19% and 27.71% cases respectively. There was no difference in clinical manifestations between children and adult except occurrence of fever (p = 0.0365). We identified possible aetiological factors in 32.53% cases as relevant drug intake in 10.84%, exposure to chemicals in 13.25% and hepatitis in 8.43% cases. We found low mean haemoglobin (3.81 +/- 1.71 g/dl), leucocyte and platelet (3.05 +/- 1.3 and 37.30 +/- 35 x 10(3)/cmm), neutrophil (30.28 +/- 21.76%) and high lymphocyte (67.27 +/- 22.50%) in peripheral blood. At the time of presentation, aplastic anaemia was moderate in 59.04% cases, severe in 48.19% cases and mild in 4.82% cases. We estimated the prevalence of aplastic anaemia in 4 districts of West Bengal including tea garden areas was 2.98/million populations per year. It was concluded that aplastic anaemia is a major non-malignant haematological disease in this part of India, and an increasing use of chemicals in agricultural and tea garden areas might be the responsible factor. Larger population based study is suggested.

Mixed Layer Heat and Fresh Water Balance in North Bay of Bengal (18N, 90E) Using a Seaglider and Mooring

NASA Astrophysics Data System (ADS)

Thangaprakash, V. P.; Girishkumar, M. S.; S, S.; Chaudhuri, D.; Sureshkumar, N.; Ravichandran, M.; Sengupta, D.; Weller, R. A.

2016-02-01

The Bay of Bengal (BoB) receives the large quantity of freshwater by excess precipitation over evaporation and runoff. This large freshwater flux into the BoB leads to strong haline stratification in the near surface layer, which have significant impact on the evolution of near thermo-haline structure and air-sea interactions process in those areas. However, lack of systematic measurements of observations, the factors that are modulating near mixed layer salinity and temperature in these freshwater pool in the northern BoB is not yet understood clearly. Under OMM - ASIRI (Ocean mixing and monsoon - Air sea interaction regional initiatives in the Northern Indian Ocean) programme, 3 month repeated hydrographic survey using seaglider in a butterfly (or bowtie) track centered around a mooring in the North Bay of Bengal (18N, 89E) equipped with near surface ASIMET sensors and subsurface temperature and salinity measurements, which provides unprecedental data source to quantify the relative contribution of different process on the evolution of near surface thermo-haline field through mixed layer heat and salt budget. The results of the analysis will be presented.

Lujan Mark-4

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mocko, Michael Jeffrey; Zavorka, Lukas; Koehler, Paul E.

2017-11-13

This is a review of Mark-IV target neutronics design. It involved the major redesign of the upper tier, offering harder neutron spectra for upper-tier FPs; a redesign of the high-resolution (HR) moderator; and a preservation of the rest of Mark-III features.

Nomophobic behaviors among smartphone using medical and engineering students in two colleges of West Bengal.

PubMed

Dasgupta, Pallabi; Bhattacherjee, Sharmistha; Dasgupta, Samir; Roy, Jayanta Kumar; Mukherjee, Abhijit; Biswas, Romy

2017-01-01

Growing smartphone usage among global and Indian college students has resulted in considerable issues of "nomophobia" (NMP) or feelings of discomfort or anxiety experienced by individuals whenever unable to use their smartphones. This significantly impacts their health, work, and study. The objective of this study is to find out the prevalence of NMP among smartphone using medical and engineering undergraduates of West Bengal and to compare the nomophobic behaviors, its predictors, and smartphone usage among them. A cross-sectional study was conducted among 303 medical and 305 engineering undergraduates in West Bengal using a validated NMP questionnaire consisting of four factors. Comparison of means of individual questions and factor scores was done. Nomophobic clusters among the two groups were identified using two-stage cluster analysis. Binary logistic regression was used for comparison of predictors of NMP. Engineering students showed a higher proportion of nomophobics (44.6%) than medical students (42.6%). Significant higher means was observed among engineering students for the factor "giving upconvenience" and individual variables like "scared due to running out of battery," "nervous due to disconnection from online identity," "uncomfortable when unable stay up-to-date with social media" and "anxious when unable to check E-mails." A Higher proportion of nomophobics among both groups were females, those owning smartphone beyond 2 years, having monthly mobile bill above Rs. 200 and spending over 4 h daily on smartphone. NMP has emerged as a significant cause of concern among both the groups. Standardized measures for identification and appropriate psychobehavioral therapy for those seeking help might alleviate the problem.

Minimal Marking: A Success Story

ERIC Educational Resources Information Center

McNeilly, Anne

2014-01-01

The minimal-marking project conducted in Ryerson's School of Journalism throughout 2012 and early 2013 resulted in significantly higher grammar scores in two first-year classes of minimally marked university students when compared to two traditionally marked classes. The "minimal-marking" concept (Haswell, 1983), which requires…

14 CFR 45.10 - Marking.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Marking. 45.10 Section 45.10 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT IDENTIFICATION AND REGISTRATION MARKING Identification of Aircraft and Related Products § 45.10 Marking. No person may mark a...

Prevalence of sorbitol non-fermenting Shiga toxin-producing Escherichia coli in Black Bengal goats on smallholdings.

PubMed

Das Gupta, M; Das, A; Islam, M Z; Biswas, P K

2016-09-01

A cross-sectional survey was carried out in Bangladesh with the sampling of 514 Black Bengal goats on smallholdings to determine the presence of sorbitol non-fermenting (SNF) Shiga toxin-producing E. coli (STEC). Swab samples collected from the recto-anal junction were plated onto cefixime and potassium tellurite added sorbitol MacConkey (CT-SMAC) agar, a selective medium for STEC O157 serogroup, where this serogroup and other SNF STEC produce colourless colonies. The SNF E. coli (SNF EC) isolates obtained from the survey were investigated by PCR for the presence of Shiga toxin-producing genes, stx1 and stx2, and two other virulence genes, eae and hlyA that code for adherence factor (intimin protein) and pore-forming cytolysin, respectively. The SNF EC isolates were also assessed for the presence of the rfbO157 gene to verify their identity to O157 serogroup. The results revealed that the proportions of goats carrying SNF EC isolates and stx1 and stx2 genes were 6·2% (32/514) [95% confidence interval (CI) 4·4-8·7)], 1·2% (95% CI 0·5-2·6) and 1·2% (95% CI 0·5-2·6), respectively. All the SNF STEC tested negative for rfbO157, hlyA and eae genes. The risk for transmission of STEC from Black Bengal goats to humans is low.

Study of HLA Class I gene in Indian schizophrenic patients of Siliguri, West Bengal.

PubMed

Singh, Bisu; Bera, Nirmal Kumar; De, Santanu; Nayak, Chittaranjan; Chaudhuri, Tapas Kumar

2011-09-30

The authors studied the prevalence of the human leukocyte antigen (HLA) Class I gene in 136 (85 male, 51 female) India-born schizophrenia patients residing in and around the Siliguri subdivision of West Bengal by the PCR-SSP method. The control group consisted of 150 age- and sex-matched healthy individuals from the same ethnic group as the patients. Increased frequency of HLA A*03 as well as decreased frequencies of HLA A*31 and HLA B*51, was noted. The study suggests the possible existence of a susceptibility locus for schizophrenia within the HLA region. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

Laser marking as environment technology

NASA Astrophysics Data System (ADS)

Sobotova, Lydia; Badida, Miroslav

2017-11-01

The contribution deals with the laser marking as one of the progressive and environment friendly technologies with utilisation in many branches of industry. Engraving and other types of laser marking of different types of materials are very actual technologies these days. Laser marking decreases the waste creation in comparison with the other classical marking technologies, which use paintings or created chips. In this experimental investigation the laser marking surface texturing of material AL99,7 according to STN 42 4003:1993-08 (STN EN 573) has been conducted. The laser marking machine TruMark 6020 and software TruTops Mark were used. Laser surface texturing after laser marking has been realised under different combinations of process parameters: pulse frequency, pulse energy and laser beam scanning speed. The morphological characterization of engraving or annealing surfaces has been performed using scanning electron microscopy (SEM) technique. The evaluation of roughness of engraved surfaces has been realized according to STN EN ISO 4287 by using Surftest SJ 301. The aim of the contribution was to show how different laser parameters affect the surface texture and colour change of metallic materials while creating minimal waste.

Chordoma of the thoracic vertebrae in a Bengal tiger (Panthera tigris tigris)

PubMed Central

KURAMOCHI, Mizuki; IZAWA, Takeshi; HORI, Mayuka; KUSUDA, Kayo; SHIMIZU, Junichiro; ISERI, Toshie; AKIYOSHI, Hideo; OHASHI, Fumihito; KUWAMURA, Mitsuru; YAMATE, Jyoji

2015-01-01

A 19-year-old female Bengal tiger (Panthera tigris tigris) was presented with hind limb weakness, ataxia and respiratory distress. Computed tomography revealed a mass between the left side of the T7 vertebra and the base of the left 7th rib. The tiger then died, and necropsy was performed. Grossly, the vertebral mass was 6 × 5.7 × 3 cm, and invaded the adjacent vertebral bone and compressed the T7 spinal cord. Histologically, the mass was composed of large, clear, vacuolated and polygonal cells with osteochondral matrix. Cellular and nuclear atypia were moderate. The vacuolated cells stained positively for cytokeratin and vimentin and negatively for S-100. Based on these findings, the present case was diagnosed as a vertebral chordoma; the first report in a tiger. PMID:25766770

Marking as Judgment

ERIC Educational Resources Information Center

Brooks, Val

2012-01-01

An aspect of assessment which has received little attention compared with perennial concerns, such as standards or reliability, is the role of judgment in marking. This paper explores marking as an act of judgment, paying particular attention to the nature of judgment and the processes involved. It brings together studies which have explored…

The Himalaya-Bengal Fan source to sink system - new insights by correlation of re-processed seismic data and IODP Expedition 354 results

NASA Astrophysics Data System (ADS)

Bergmann, Fenna; Schwenk, Tilmann; Spiess, Volkard; France-Lanord, Christian

2016-04-01

The Bengal Fan, hosted in the northern Indian Ocean, is the largest submarine fan on Earth. Fan evolution started in the Early Eocene as a direct response to the collision of India with the Asian continent in Middle Paleocene times. Subsequently the Himalayan plateau uplift was initiated. Thereby generated interactions with the regional climate caused the evolution of the Indian monsoonal system. Drained by the rivers Ganges and Brahmaputra, ~ 80% of eroded Himalayan sediments are deposited in the Bengal Fan. Hence, the Fan provides the most complete record of the Himalayan history and is well suited to investigate the direct link between the tectonic uplift and the climate evolution of the region. Sediments are transported onto the deep sea fan by turbidity currents building up chan-nel-levee systems. These channel-levee systems are the main architectural elements of the Bengal Fan and are suspected to have their onset in Late Miocene times. Frequent channel avulsion on the upper fan led to the abandonment of old channels and formation of new channel-levee systems or even channel-reoccupation. This complex erosional/depositional system involves lateral depocenter migration, probably on millennial timescales. Conse-quently, investigations of the Himalaya as sediment source begins with a comprehensive understanding of transport, deposition and modification within the Bengal Fan sediment sink. In February/March 2015 the IODP Expedition 354 drilled at 7 sites along a ~320 km long E-W transect at 8° N. Aiming at the recovery of pre-fan deposits and deposits of the Pliocene and Upper Miocene Fan evolution, three deep sites (900 - 1200 mbsf) were realized. These where complemented by four shallow sites (200-300 mbsf) for a detailed study of the depos-its of the last 1-2 million years, including the latest known channel activities (Holocene times). Several channel-levee systems and inter-channel deposits were drilled, active at different times of Fan evolution. To

Construction of a Full-Length Enriched cDNA Library and Preliminary Analysis of Expressed Sequence Tags from Bengal Tiger Panthera tigris tigris

PubMed Central

Liu, Changqing; Liu, Dan; Guo, Yu; Lu, Taofeng; Li, Xiangchen; Zhang, Minghai; Ma, Jianzhang; Ma, Yuehui; Guan, Weijun

2013-01-01

In this study, a full-length enriched cDNA library was successfully constructed from Bengal tiger, Panthera tigris tigris, the most well-known wild Animal. Total RNA was extracted from cultured Bengal tiger fibroblasts in vitro. The titers of primary and amplified libraries were 1.28 × 106 pfu/mL and 1.56 × 109 pfu/mL respectively. The percentage of recombinants from unamplified library was 90.2% and average length of exogenous inserts was 0.98 kb. A total of 212 individual ESTs with sizes ranging from 356 to 1108 bps were then analyzed. The BLASTX score revealed that 48.1% of the sequences were classified as a strong match, 45.3% as nominal and 6.6% as a weak match. Among the ESTs with known putative function, 26.4% ESTs were found to be related to all kinds of metabolisms, 19.3% ESTs to information storage and processing, 11.3% ESTs to posttranslational modification, protein turnover, chaperones, 11.3% ESTs to transport, 9.9% ESTs to signal transducer/cell communication, 9.0% ESTs to structure protein, 3.8% ESTs to cell cycle, and only 6.6% ESTs classified as novel genes. By EST sequencing, a full-length gene coding ferritin was identified and characterized. The recombinant plasmid pET32a-TAT-Ferritin was constructed, coded for the TAT-Ferritin fusion protein with two 6× His-tags in N and C-terminal. After BCA assay, the concentration of soluble Trx-TAT-Ferritin recombinant protein was 2.32 ± 0.12 mg/mL. These results demonstrated that the reliability and representativeness of the cDNA library attained to the requirements of a standard cDNA library. This library provided a useful platform for the functional genome and transcriptome research of Bengal tigers. PMID:23708105

Construction of a full-length enriched cDNA library and preliminary analysis of expressed sequence tags from Bengal Tiger Panthera tigris tigris.

PubMed

Liu, Changqing; Liu, Dan; Guo, Yu; Lu, Taofeng; Li, Xiangchen; Zhang, Minghai; Ma, Jianzhang; Ma, Yuehui; Guan, Weijun

2013-05-24

In this study, a full-length enriched cDNA library was successfully constructed from Bengal tiger, Panthera tigris tigris, the most well-known wild Animal. Total RNA was extracted from cultured Bengal tiger fibroblasts in vitro. The titers of primary and amplified libraries were 1.28 × 106 pfu/mL and 1.56 × 109 pfu/mL respectively. The percentage of recombinants from unamplified library was 90.2% and average length of exogenous inserts was 0.98 kb. A total of 212 individual ESTs with sizes ranging from 356 to 1108 bps were then analyzed. The BLASTX score revealed that 48.1% of the sequences were classified as a strong match, 45.3% as nominal and 6.6% as a weak match. Among the ESTs with known putative function, 26.4% ESTs were found to be related to all kinds of metabolisms, 19.3% ESTs to information storage and processing, 11.3% ESTs to posttranslational modification, protein turnover, chaperones, 11.3% ESTs to transport, 9.9% ESTs to signal transducer/cell communication, 9.0% ESTs to structure protein, 3.8% ESTs to cell cycle, and only 6.6% ESTs classified as novel genes. By EST sequencing, a full-length gene coding ferritin was identified and characterized. The recombinant plasmid pET32a-TAT-Ferritin was constructed, coded for the TAT-Ferritin fusion protein with two 6× His-tags in N and C-terminal. After BCA assay, the concentration of soluble Trx-TAT-Ferritin recombinant protein was 2.32 ± 0.12 mg/mL. These results demonstrated that the reliability and representativeness of the cDNA library attained to the requirements of a standard cDNA library. This library provided a useful platform for the functional genome and transcriptome research of Bengal tigers.

Snow conditions as an estimator of the breeding output in high-Arctic pink-footed geese Anser brachyrhynchus

USGS Publications Warehouse

Jensen, Gitte Høj; Madsen, Jesper; Johnson, Fred A.; Tamstorf, Mikkel P.

2014-01-01

The Svalbard-breeding population of pink-footed geese Anser brachyrhynchus has increased during the last decades and is giving rise to agricultural conflicts along their migration route, as well as causing grazing impacts on tundra vegetation. An adaptive flyway management plan has been implemented, which will be based on predictive population models including environmental variables expected to affect goose population development, such as weather conditions on the breeding grounds. A local study in Svalbard showed that snow cover prior to egg laying is a crucial factor for the reproductive output of pink-footed geese, and MODIS satellite images provided a useful estimator of snow cover. In this study, we up-scaled the analysis to the population level by examining various measures of snow conditions and compared them with the overall breeding success of the population as indexed by the proportion of juveniles in the autumn population. As explanatory variables, we explored MODIS images, satellite-based radar measures of onset of snow melt, winter NAO index, and the May temperature sum and May thaw days. To test for the presence of density dependence, we included the number of adults in the population. For 2000–2011, MODIS-derived snow cover (available since 2000) was the strongest indicator of breeding conditions. For 1981–2011, winter NAO and May thaw days had equal weight. Interestingly, there appears to have been a phase shift from density-dependent to density-independent reproduction, which is consistent with a hypothesis of released breeding potential due to the recent advancement of spring in Svalbard.

Evaluation of remote sensing in control of pink bollworm in cotton

NASA Technical Reports Server (NTRS)

Lewis, L. N. (Principal Investigator); Coleman, V. B.; Johnson, C. W.

1973-01-01

The author has identified the following significant results. This project is to identify and map cotton fields in the southern deserts of California. Cotton in the Imperial, Coachella, and Palo Verde Valleys is heavily infested by the pink bollworm which affects both the quantity and quality of cotton produced. In California the growing season of cotton is regulated by establishing planting and plowdown dates. These procedures ensure that the larvae, whose diapause or resting period occurs during the winter months, will have no plant material on which to feed, thus inhibiting spring moth emergence. the underflight data from the U-2 aircraft has shound that it is possible to detect the differences between a growing, a defoliated, and plowed down field providing the locations of the fields are known. The ERTS-1 MSS data are being analyzed using an I2S optical color combiner to determine which combinations of dates and colors will identify cotton fields and thus provide the data needed to produce maps of the fields for the forthcoming season.

9 CFR 316.9 - Products to be marked with official marks.

Code of Federal Regulations, 2010 CFR

2010-01-01

... marks. 316.9 Section 316.9 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF... liver, beef tongue, and beef heart which has been inspected and passed shall be marked with the official... round, flank, loin, rib, plate, brisket, chuck, and shank are primal parts of beef carcasses. Veal...

9 CFR 316.9 - Products to be marked with official marks.

Code of Federal Regulations, 2012 CFR

2012-01-01

... marks. 316.9 Section 316.9 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF... liver, beef tongue, and beef heart which has been inspected and passed shall be marked with the official... round, flank, loin, rib, plate, brisket, chuck, and shank are primal parts of beef carcasses. Veal...

9 CFR 316.9 - Products to be marked with official marks.

Code of Federal Regulations, 2011 CFR

2011-01-01

... marks. 316.9 Section 316.9 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF... liver, beef tongue, and beef heart which has been inspected and passed shall be marked with the official... round, flank, loin, rib, plate, brisket, chuck, and shank are primal parts of beef carcasses. Veal...

9 CFR 316.9 - Products to be marked with official marks.

Code of Federal Regulations, 2014 CFR

2014-01-01

... marks. 316.9 Section 316.9 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF... liver, beef tongue, and beef heart which has been inspected and passed shall be marked with the official... round, flank, loin, rib, plate, brisket, chuck, and shank are primal parts of beef carcasses. Veal...

9 CFR 316.9 - Products to be marked with official marks.

Code of Federal Regulations, 2013 CFR

2013-01-01

... marks. 316.9 Section 316.9 Animals and Animal Products FOOD SAFETY AND INSPECTION SERVICE, DEPARTMENT OF... liver, beef tongue, and beef heart which has been inspected and passed shall be marked with the official... round, flank, loin, rib, plate, brisket, chuck, and shank are primal parts of beef carcasses. Veal...

Cesiribacter roseus sp. nov., a pink-pigmented bacterium isolated from desert sand.

PubMed

Liu, Ming; Qi, Huan; Luo, Xuesong; Dai, Jun; Peng, Fang; Fang, Chengxiang

2012-01-01

A pink-pigmented, Gram-negative, rod-shaped, motile, strictly aerobic bacterium, designated strain 311(T), was isolated from desert sand in Xinjiang, China. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain 311(T) was related closely to Cesiribacter andamanensis AMV16(T) (94.6% similarity). The DNA G+C content of strain 311(T) was 47.1 mol% and the major respiratory quinone was menaquinone 7 (MK-7). The main cellular fatty acids were C(16:1)ω5c (29.9%), iso-C(15:0) (21.9%), iso-C(17:0) 3-OH (13.3%) and summed feature 4 (iso-C(17:1) I and/or anteiso-C(17:1) B; 13.0%). Based on phenotypic and chemotaxonomic data and phylogenetic analysis, strain 311(T) is considered to represent a novel species of the genus Cesiribacter, for which the name Cesiribacter roseus sp. nov. is proposed. The type strain is 311(T) (=CCTCC AB 207142(T) =KACC 15456(T)).

Indo-Burmese subduction of the Bengal basin controlled by 90°E ridge collison imaged from deep seismic reflection data

NASA Astrophysics Data System (ADS)

Rangin, C.; Maurin, T.

2009-12-01

As a result of the Indo Burmese active hyper-oblique subduction, part of the Bay of Bengal is presently subducting eastward below the Burmese microplate. We have conducted two deep penetration seismic reflection surveys in the north-eastern Bay of Bengal, providing the first high resolution seismic image of the Bengal basin fill and basement. On basis of these data, we are able to trace the 90°E ridge much more northward than previously thought, i.e. up to 20°N along the Indo-Burmese plate boundary. We found out that the surface deformation, the deep structure of the subduction zone and the geometry of the plate boundary could all be strongly influenced by the impact of a prominent asperity, the 90°E ridge. These effects are variable along the margin. Between 15°N and 18°N, the ridge asperity brushes the active burmese plate boundary that strikes N10°E. At this latitude, all the structures framing the Indo-Burmese wedge have a similar N10°E trend. Deformation at the plate boundary is mainly strike slip. This is confirmed by the absence of subducted slab at depth as indicated by both seismicity and tomography. The small component of shortening along this plate boundary is probably accommodated partly by the flexure of the ridge and partly within the deformed upper plate. North of 19°N, the ridge vanishes progressively. The absence of basement topography together with the large amount of sediments provided by the Brahmaputra delta facilitates the fast westward growth of the Indo-Burmese wedge. The seismicity fits a well developed subducted slab at depth,. In the narrow transition zone between 18°N and 19°N, the 90°E ridge northern tips collides with the Burmese microplate. This collision could explain the rise of a subsuface flat and ramp system offshore Ramree and Cheduba islands, and the strong uplift of the Indo-Burmese wedge in Mount Victoria area.

Human and cattle population changes in deltaic West Bengal, India between 1977-1987

DOE Office of Scientific and Technical Information (OSTI.GOV)

Odend'hal, S.

1988-03-01

In 1967-1970, 3.81 km/sup 2/ of a densely populated deltaic area of Hooghly district in West Bengal, India was intensively studied. This same area was resurveyed in 1977 and 1987. From 1977-1987, the human population has increased 10.1%, while the number of households has increased 25%. The total number of children below 10 years of age has diminished. The cattle have increased 26.5%. The number of working-age male cattle has dropped significantly with reliance, primarily on hand tractor power for field cultivation. The number of female cattle has increased substantially. Artificial insemination and the use of temperate breeds of bullsmore » have had an obvious impact. Improvements in the general environment were observed.« less

The 21 May 2014 Mw 5.9 Bay of Bengal earthquake: macroseismic data suggest a high‐stress‐drop event

USGS Publications Warehouse

Martin, Stacey; Hough, Susan E.

2015-01-01

A modest but noteworthy Mw 5.9 earthquake occurred in the Bay of Bengal beneath the central Bengal fan at 21:51 Indian Standard Time (16:21 UTC) on 21 May 2014. Centered over 300 km from the eastern coastline of India (Fig. 1), it caused modest damage by virtue of its location and magnitude. However, shaking was very widely felt in parts of eastern India where earthquakes are uncommon. Media outlets reported as many as four fatalities. Although most deaths were blamed on heart attacks, the death of one woman was attributed by different sources to either a roof collapse or a stampede (see Table S1, available in the electronic supplement to this article). Across the state of Odisha, as many as 250 people were injured (see Table S1), most after jumping from balconies or terraces. Light damage was reported from a number of towns on coastal deltaic sediments, including collapsed walls and damage to pukka and thatched dwellings. Shaking was felt well inland into east‐central India and was perceptible in multistoried buildings as far as Chennai, Delhi, and Jaipur at distances of ≈1600  km (Table 1).

Prevalence of Psychiatric Morbidity Among Undergraduate Students of a Dental College in West Bengal.

PubMed

Makhal, Manabendra; Ray, Pradip Kumar; Ray Bhattacharya, Sampa; Ghosh, Subhankar; Majumder, Uttam; DE, Shantanu; Bandyopadhyay, Gautam Kumar; Bera, Nirmal Kumar

2015-07-01

Stresses of medical course affects the academic performance as well as physical and psychological health of the students negatively. In the present day scenario every one of us has vulnerability to have psychiatric morbidity. Like other young adults, undergraduate dental students are similarly vulnerable to turmoil due to academic and social stresses, which often hamper the educational achievement. Early detection and treatment of psychological morbidities shorten the suffering leading to less social impairment in long term. The aim of this study was to assess the psychiatric morbidity of dental students and the factors affecting their mental health. This cross sectional, descriptive and correlation study was conducted in North Bengal Dental College, a rural dental college of West Bengal, India. The study sample consisted of a total of 89 dental students. The student enrollment was done by "simple random sampling method". The semi-structured proforma and the General Health Questionnaire (GHQ)-28 were used to collect data and to assess the psychiatric morbidity. Pearson's correlation followed by multivariate linear regression analysis was done to assess the effect of academic achievement, positive and negative event on the GHQ total score. The overall mean GHQ total score in the study population was 5.33, with a SD of 4.85 which was above the cutoff (>4) score. Karl Pearson correlation co-efficient r-values for GHQ total score with 'academic achievement' and 'negative events' score were 0.718 and 0.628 respectively and p-values were 0.001 and 0.001. The poor academic performance and negative events had strong impact on psychological morbidity of dental students. The findings of our study can't be generalized for all undergraduate dental student due to small sample size and non inclusion of many other variables.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Park, Jeehye; Lee, Gina; Chung, Jongkyeong

The two Parkinson's disease (PD) genes, PTEN-induced kinase 1 (PINK1) and parkin, are linked in a common pathway which affects mitochondrial integrity and function. However, it is still not known what this pathway does in the mitochondria. Therefore, we investigated its physiological function in Drosophila. Because Drosophila PINK1 and parkin mutants show changes in mitochondrial morphology in both indirect flight muscles and dopaminergic neurons, we here investigated whether the PINK1-Parkin pathway genetically interacts with the regulators of mitochondrial fusion and fission such as Drp1, which promotes mitochondrial fission, and Opa1 or Marf, which induces mitochondrial fusion. Surprisingly, DrosophilaPINK1 and parkinmore » mutant phenotypes were markedly suppressed by overexpression of Drp1 or downregulation of Opa1 or Marf, indicating that the PINK1-Parkin pathway regulates mitochondrial remodeling process in the direction of promoting mitochondrial fission. Therefore, we strongly suggest that mitochondrial fusion and fission process could be a prominent therapeutic target for the treatment of PD.« less

Electron microscopic, genetic and protein expression analyses of Helicobacter acinonychis strains from a Bengal tiger.

PubMed

Tegtmeyer, Nicole; Rivas Traverso, Francisco; Rohde, Manfred; Oyarzabal, Omar A; Lehn, Norbert; Schneider-Brachert, Wulf; Ferrero, Richard L; Fox, James G; Berg, Douglas E; Backert, Steffen

2013-01-01

Colonization by Helicobacter species is commonly noted in many mammals. These infections often remain unrecognized, but can cause severe health complications or more subtle host immune perturbations. The aim of this study was to isolate and characterize putative novel Helicobacter spp. from Bengal tigers in Thailand. Morphological investigation (Gram-staining and electron microscopy) and genetic studies (16SrRNA, 23SrRNA, flagellin, urease and prophage gene analyses, RAPD DNA fingerprinting and restriction fragment polymorphisms) as well as Western blotting were used to characterize the isolated Helicobacters. Electron microscopy revealed spiral-shaped bacteria, which varied in length (2.5-6 µm) and contained up to four monopolar sheathed flagella. The 16SrRNA, 23SrRNA, sequencing and protein expression analyses identified novel H. acinonychis isolates closely related to H. pylori. These Asian isolates are genetically very similar to H. acinonychis strains of other big cats (cheetahs, lions, lion-tiger hybrid and other tigers) from North America and Europe, which is remarkable in the context of the great genetic diversity among worldwide H. pylori strains. We also found by immunoblotting that the Bengal tiger isolates express UreaseA/B, flagellin, BabA adhesin, neutrophil-activating protein NapA, HtrA protease, γ-glutamyl-transpeptidase GGT, Slt lytic transglycosylase and two DNA transfer relaxase orthologs that were known from H. pylori, but not the cag pathogenicity island, nor CagA, VacA, SabA, DupA or OipA proteins. These results give fresh insights into H. acinonychis genetics and the expression of potential pathogenicity-associated factors and their possible pathophysiological relevance in related gastric infections.

Electron Microscopic, Genetic and Protein Expression Analyses of Helicobacter acinonychis Strains from a Bengal Tiger

PubMed Central

Tegtmeyer, Nicole; Rivas Traverso, Francisco; Rohde, Manfred; Oyarzabal, Omar A.; Lehn, Norbert; Schneider-Brachert, Wulf; Ferrero, Richard L.; Fox, James G.; Berg, Douglas E.; Backert, Steffen

2013-01-01

Colonization by Helicobacter species is commonly noted in many mammals. These infections often remain unrecognized, but can cause severe health complications or more subtle host immune perturbations. The aim of this study was to isolate and characterize putative novel Helicobacter spp. from Bengal tigers in Thailand. Morphological investigation (Gram-staining and electron microscopy) and genetic studies (16SrRNA, 23SrRNA, flagellin, urease and prophage gene analyses, RAPD DNA fingerprinting and restriction fragment polymorphisms) as well as Western blotting were used to characterize the isolated Helicobacters. Electron microscopy revealed spiral-shaped bacteria, which varied in length (2.5–6 µm) and contained up to four monopolar sheathed flagella. The 16SrRNA, 23SrRNA, sequencing and protein expression analyses identified novel H. acinonychis isolates closely related to H. pylori. These Asian isolates are genetically very similar to H. acinonychis strains of other big cats (cheetahs, lions, lion-tiger hybrid and other tigers) from North America and Europe, which is remarkable in the context of the great genetic diversity among worldwide H. pylori strains. We also found by immunoblotting that the Bengal tiger isolates express UreaseA/B, flagellin, BabA adhesin, neutrophil-activating protein NapA, HtrA protease, γ-glutamyl-transpeptidase GGT, Slt lytic transglycosylase and two DNA transfer relaxase orthologs that were known from H. pylori, but not the cag pathogenicity island, nor CagA, VacA, SabA, DupA or OipA proteins. These results give fresh insights into H. acinonychis genetics and the expression of potential pathogenicity-associated factors and their possible pathophysiological relevance in related gastric infections. PMID:23940723

On a new species of Aplectana (Nematoda, Cosmocercidae) from Kulti, Burdwan, West Bengal, India.

PubMed

Sou, Sujan K; Sow, Kanchan K; Nandi, Anadi P

2014-10-01

During routine survey for amphibian nematodes from coalfield areas of West Bengal, India 7 male and 12 female nematodes were recovered from the rectum of one out of three Duttaphrynus melanostictus (Schneider, 1899) examined for helminth infection from Kulti, Burdwan. On examination the recovered nematodes were found to belong to a new species of the genus Aplectana (Nematoda: Cosmocercidae) and the name Aplectana duttaphryni sp. nov. is proposed for them. This species is most similar to those species which possess gubernaculum but differs from all by distribution pattern of caudal papillae. Aplectana duttaphryni sp. nov. represents 49(th) species assigned to the genus, but only the 4(th) species reported from Oriental realm and second from India.

Trapping of Momentum due to Low Salinity Water in the north Bay of Bengal

NASA Astrophysics Data System (ADS)

Chaudhuri, D.; Tandon, A.; Farrar, T.; Weller, R. A.; Venkatesan, R.; S, S.; MacKinnon, J. A.; D'Asaro, E. A.; Sengupta, D.

2016-02-01

We study the relation between near-surface ocean stratification and upper ocean currents (momentum) during the diurnal cycle and subseasonal "active-break cycle" of the summer monsoon in the north Bay of Bengal. We use time series of hourly observations from NIOT moorings BD08, BD09 and an INCOIS mooring near 18 N, 89 E in 2013, and data collected during two research cruises of ORV Sagar Nidhi in August-September 2014 and 2015. Our analyses are based on upper ocean profiles of temperature, salinity and density (from moorings and a shipborne underway conductivity-temperature-depth profiler), velocity (Acoustic Doppler Current Profiler), and surface forcing (meterology sensors on moored buoy and ship). Monsoon breaks are characterized by low rainfall, low wind speed (0-5 m/s) and high incident shortwave radiation, whereas active phases are marked by intense rainfall, high wind speed (8-16 m/s) and low incident sunlight. Our main findings are: (i) Net surface heat flux is positive (ocean gains heat) during break spells, and sea surface temperature (SST) rises by upto 1.5 C in 1-2 weeks. (ii) During breaks, day-night SST difference can reach 1.5C; mixed layer depth (MLD) shoals to 5m during day time, and deepens to 15-20 m by late night/early morning. (iii) During active spells, SST cools on subseasonal scales; MLD is deep (exceeding 20 m), and diurnal re-stratification is weak or absent. (iv) Once very low-salinity water (<30 psu) from rivers arrives at the moorings in late August, MLD remains shallow, and is insensitive to subseasonal changes in surface forcing. (v) Moored data and high-resolution observations from the summer 2014 and 2015 cruises reveal trapping of momentum from winds in a relatively thin surface layer when surface salinity is low and the shallow stratification is strong. Results of ingoing analyses will be presented at the meeting.

Impact of extension interventions in improving livelihood of dairy farmers of Nadia district of West Bengal, India.

PubMed

Garai, Suman; Garai, Sanchita; Maiti, Sanjit; Meena, B S; Ghosh, M K; Bhakat, Champak; Dutta, T K

2017-03-01

Livestock is a one of the major sources of livelihood for most of the small and marginal farmers in India, particularly for rural households who live in below poverty line. Extension interventions have long been seen as a key element for enabling farmers to obtain information and technologies that can improve their livelihoods. It is also recognized that extension is an important factor in promoting dairy development. Ex-post-facto cause to effect research design was applied in this study to trace out the impact of extension interventions in improving knowledge, attitude, adoption towards scientific dairy farming practices and improvement in milk production of dairy animal and income from dairying which will be resulted into improved livelihood of rural poor in Nadia district of West Bengal, India. Therefore, 60 dairy farmers of experimental villages who were considered as beneficiaries and 60 dairy farmers of control villages who were considered as non-beneficiaries were selected as sample for the study. It was found that beneficiaries had significantly higher score in all the five components of livelihood improvement with its all sub components, i.e., knowledge, attitude, adoption of scientific dairy farming practices, milk production per household per day and monthly income from dairying except disease control, and marketing component of adoption. Hence, it may be concluded that extension interventions had a significant impact on improving livelihood of rural dairy farmers in Nadia district of West Bengal, India.

Unsafe Disposal of Child Faeces: A Community-based Study in a Rural Block in West Bengal, India.

PubMed

Ps, Preeti; Sahoo, Sanjaya Kumar; Biswas, Dhiraj; Dasgupta, Aparajita

2016-09-01

A clean India is the responsibility of all Indians. One of the objectives of the Swachh Bharat Abhiyan (Clean India Initiative) is to bring about behavioural changes regarding healthy sanitation practices. While large-scale programs in India have increased latrine coverage, they have to some extent failed to bring behavioural changes ensuring optimal latrine use, including the safe disposal of child faeces, which is a significant source of exposure to faecal pathogens. Hence, this study was done to explore child faeces disposal practices in rural West Bengal and to elicit the determinants of unhygienic faeces disposal. Data collection was done using an interview method among the mothers of 502 under-5 children, following a pre-designed, semi-structured schedule during house-to-house visits in a set of villages in the Hooghly district of West Bengal. The prevalence of unsafe disposal of child faeces was 72.4%, and maternal education, per capita income, and water source were found to be significantly associated with unsafe child faeces disposal. This study draws attention to the unsafe disposal of child faeces in this area of India and raises questions about the efficiency of sanitation campaigns in rural India that focus on expanding coverage rather than emphasizing behavioural changes, which are crucial to ensure the safe disposal of child faeces. Thus, it is urgently necessary to strengthen efforts focusing on behavioural changes regarding the safe disposal of child faeces in order to minimise adverse health outcomes.

The influence of the N(2D) and N(2P) states in the ionization of the pink afterglow of the nitrogen flowing DC discharge

NASA Astrophysics Data System (ADS)

Levaton, J.; Klein, A. N.; Binder, C.

2018-01-01

In the present work, we extensively discuss the role of N(2D) and N(2P) atoms in the ionization processes of pink afterglow based on optical emission spectroscopy analysis and kinetic numerical modelling. We studied the pink afterglow generated by a nitrogen DC discharge operating at 0.6 Slm-1 flow rate, 45 mA discharge current and pressures ranging from 250 to 1050 Pa. The 391.4 nm nitrogen band was monitored along the afterglow furnishing the relative density of the N2+(B2Σ+u, v = 0) state. A numerical model developed to calculate the nitrogen species densities in the afterglow fits the excited ion density profiles well for the experimental conditions. From the modelling results, we determine the densities of the N+, N2+, N3+, and N4+ ions; the calculations show that the N3+ ion density predominates in the afterglow at the typical residence times of the pink afterglow. This behaviour has been observed experimentally and reported in the literature. Furthermore, we calculate the fractional contribution in the ionization for several physical-chemical mechanisms in the post-discharge. Even with the N3+ ion density being dominant in the afterglow, we find through the calculations that the ionization is dominated by the reactions N(2D) + N(2P) → N2+(X2Σ+g) + e and N2(a'1Σ-u) + N2(X 1Σg+, v > 24) → N4+ + e. The ion conversion mechanisms, or ion transfer reactions, which are responsible for the fact that the N3+ density dominates in the post-discharge, are investigated.

Monitoring of mass measles campaign in AILA-affected areas of West Bengal.

PubMed

Dasgupta, Samir; Bagchi, Saumendra Nath; Ghosh, Pramit; Sardar, Jadab Chandra; Roy, Amal Sinha; Sau, Manabendra

2010-01-01

A mass measles campaign was organized in AILA-affected areas of West Bengal in July-August 2009. The present cross-sectional study was conducted with the objectives to monitor and assess the cold chain maintenance, safe injection practices, IEC methods adopted, and to observe the conduction of the sessions in the campaign. All the cold chain points at the block level had adequate vaccines and equipments, twice monitoring of temperature which was in optimal range. 82% sessions had team according to microplan, AWW was present and team members were actively mobilizing the children in 83% sessions, puncture proof container was used and vaccines were given in correct sites in more than 95% sessions. The study observed satisfactory conduction of the whole campaign, still the injection safety procedures should be strengthened considering the potential harm to the health care providers.

Pavement marking performance analysis

DOT National Transportation Integrated Search

2009-06-30

This research evaluated pavement marking performance and developed useful degradation models for thermoplastic : and paint pavement markings which can help North Carolina meet the pending FHWA minimum retroreflectivity : requirements. The impacts of ...

Submesoscale features and their interaction with fronts and internal tides in a high-resolution coupled atmosphere-ocean-wave model of the Bay of Bengal

NASA Astrophysics Data System (ADS)

Jensen, Tommy G.; Shulman, Igor; Wijesekera, Hemantha W.; Anderson, Stephanie; Ladner, Sherwin

2018-03-01

Large freshwater fluxes into the Bay of Bengal by rainfall and river discharges result in strong salinity fronts in the bay. In this study, a high-resolution coupled atmosphere-ocean-wave model with comprehensive physics is used to model the weather, ocean circulation, and wave field in the Bay of Bengal. Our objective is to explore the submesoscale activity that occurs in a realistic coupled model that resolves mesoscales and allows part of the submesoscale field. Horizontal resolution in the atmosphere varies from 2 to 6 km and is 13 km for surface waves, while the ocean model is submesoscale permitting with resolutions as high as 1.5 km and a vertical resolution of 0.5 m in the upper 10 m. In this paper, three different cases of oceanic submesoscale features are discussed. In the first case, heavy rainfall and intense downdrafts produced by atmospheric convection are found to force submesoscale currents, temperature, and salinity anomalies in the oceanic mixed layer and impact the mesoscale flow. In a second case, strong solitary-like waves are generated by semidiurnal tides in the Andaman Sea and interact with mesoscale flows and fronts and affect submesoscale features generated along fronts. A third source of submesoscale variability is found further north in the Bay of Bengal where river outflows help maintain strong salinity gradients throughout the year. For that case, a comparison with satellite observations of sea surface height anomalies, sea surface temperature, and chlorophyll shows that the model captures the observed mesoscale eddy features of the flow field, but in addition, submesoscale upwelling and downwelling patterns associated with ageostrophic secondary circulations along density fronts are also captured by the model.

Pleistocene Through Oligocene Record of Himalayan Orogeny and Climate. The Iodp Expedition 354 Drilling Transect across the Middle Bengal Fan at 8°N

NASA Astrophysics Data System (ADS)

Spiess, V.; France-Lanord, C.; Schwenk, T.; Klaus, A.

2015-12-01

IODP Expedition 354 in the Bay of Bengal February-March 2015 drilled a seven site, 320 km-long transect across the Bengal Fan at 8°N. Three deep penetration and additional four shallow holes provided a spatial overview of the primarily turbiditic depositional system, comprising the Bengal deep sea fan. Sediments originate from Himalayan rivers, documenting terrestrial changes of the monsoon evolution and Himalayan erosion and weathering, and are transported through a delta and shelf canyon, supplying turbidity currents loaded with a full spectrum of grain sizes. Mostly following transport channels, sediments deposit on and between levees, while depocenters are laterally shifting over hundreds of kilometers on millennial time scales. Expedition 354 documented these deposits in space and time by identifying, coring and dating numerous stratigraphic marker horizons across the transect, allowing a detailed reconstruction of channel-levee migration, abandonment, reoccupation and overall uniform growth in the late Pleistocene. High resolution records of these growth patterns were acquired in several levee, interlevee and hemipelagic successions. Miocene through Pliocene fan development was studied at three deeper sites, which document and recovered sand rich facies throughout most of the cores acquired by the half-APC coring technology, intercalated by longer periods of hemipelagic deposition and absence of turbiditic input as the results of major depocenter shifts. Recovered sediments have Himalayan mineralogical and geochemical signatures suitable to reconstruct time series of erosion, weathering and changes in source regions as well as impacts on the global carbon cycle. Miocene shifts in terrestrial vegetation, in sediment budget and in style of sediment transport have been tracked. Expedition 354 has extended the record of early fan deposition by 10 Ma into the Late Oligocene.

GCF Mark IV development

NASA Technical Reports Server (NTRS)

Mortensen, L. O.

1982-01-01

The Mark IV ground communication facility (GCF) as it is implemented to support the network consolidation program is reviewed. Changes in the GCF are made in the area of increased capacity. Common carrier circuits are the medium for data transfer. The message multiplexing in the Mark IV era differs from the Mark III era, in that all multiplexing is done in a GCF computer under GCF software control, which is similar to the multiplexing currently done in the high speed data subsystem.

Undergraduate Collaborative Research: Distribution of Plant Wax Biomarkers in Miocene-age Sediments from the Bengal Fan (IODP Exp 354)

NASA Astrophysics Data System (ADS)

Cho, P. G.; Vidal, E.; Paek, J. H.; Borsook, A.; Lee, W.; Wu, M. S.; Ponton, C.; Galy, V.; Feakins, S. J.

2017-12-01

Our research aims to understand past climatic variability in the monsoon-influenced Ganges-Brahmaputra catchment as recorded by plant wax molecules exported and sequestered in the sediments of the Bengal Fan. Samples from the late Miocene were selected from cores retrieved by the IODP (International Ocean Discovery Program) Expedition 354 that recently drilled the central Bengal Fan along a transect at 8°N. Fan sedimentation includes sand, silt, and clay mostly derived from the Himalayan range via turbiditic transport within the Bengal fan. Sedimentation is highly episodic in the fan, but a transect of drilled sites provides a record of terrigenous sediment exported and buried over the last 20 million years. A team of researchers at the University of Southern California worked to collectively process 468 samples for compound specific biomarker identification and quantification. The samples derive from Site U1451 and U1455 ranging from 0 to 1097m depth (CSF-A). Total organic carbon ranges from 0.04-0.84%. To date, 300 samples have been solvent-extracted and prepared for plant wax analyses. Long chain n-alkanoic acids and n-alkanes were identified and quantified using GC-MS and GC-FID, respectively. In the samples quantified so far, we find ΣC24-34 n-alkanoic acid concentrations from 0.07-14.16 μg/g of dry sediment and ΣC25-35 n-alkanes from 0.04-4.61 μg/g. Concentrations of C30 n-alkanoic acid range from 0.01-1.92 μg/g of dry sediment and of C33 n-alkane from <0.01-0.65 μg/g. The molecular abundance distributions of both compound-classes were found to be diagnostic of a terrestrial higher plant source. Additionally, the molecular composition of the total lipid extract was analyzed at the Woods Hole Oceanographic Institution using a GC-TOF-MS. Overall, these extracts are dominated by plant-wax compounds and other diagnostic terrestrial molecules (e.g. plant terpenoids and sterols). The results from this effort contribute to a larger mission to reconstruct

Prevalence and association of metabolic syndrome and vitamin D deficiency among postmenopausal women in a rural block of West Bengal, India.

PubMed

Srimani, Soumi; Saha, Indranil; Chaudhuri, Debnath

2017-01-01

Prevalence of metabolic syndrome (MS) and vitamin D deficiency was reported among postmenopausal women (PMW) in India. However, no report is available regarding the association of MS and 25-hydroxyvitamin D [25(OH)D] among PMW in India. This study aimed to find out the prevalence of MS and 25(OH)D status as well as their association among rural PMW of West Bengal, India. This cross-sectional study was conducted among 222 randomly selected rural PMW in Singur Block, West Bengal, India. Serum 25(OH)D, Blood pressure (BP), waist circumference (WC), fasting blood glucose (FBG), triglycerides (TG) and high density lipoprotein cholesterol (HDL-C) were measured using standard procedures. MS was defined as per International Diabetes Federation, 2005 (for Asian-Indians) criteria. Statistical tests were done using SPSS software. Prevalence of metabolic syndrome was 46%. 51% and 19% PMW were vitamin D insufficient and deficient, respectively. 22% and 53% women having MS were vitamin D insufficient and deficient, respectively. Among the PMW, 21% and 47% with WC≥80cm; 22% and 62% with FBG≥110mg/dl; 21% and 54% with TG≥150mg/dl; 23% and 51% with HDL-C<50mg/dl, 15% and 55% with BP≥130/85mm of Hg were vitamin D insufficient and deficient, respectively. Significant statistical association between FBG and 25(OH)D status existed (p = 0.01). Significant positive correlation between WC and 25(OH)D level (p = 0.004) and significant negative correlation between FBG and 25(OH)D level observed (p = 0.02). WC was the only statistically significant predictor of the dependent variable. Odds of non-sufficient 25(OH)D level increased with decrease in WC. High prevalence of MS as well as vitamin D insufficiency and deficiency existed among PMW of Singur block, West Bengal, India. 25(OH)D had significant inverse and direct relationship with FBG and WC. Low 25(OH)D may be one of the potential risk factors for developing MS in PMW or vice-versa.

Phosphorus dendrimers and photodynamic therapy. Spectroscopic studies on two dendrimer-photosensitizer complexes: Cationic phosphorus dendrimer with rose bengal and anionic phosphorus dendrimer with methylene blue.

PubMed

Dabrzalska, Monika; Zablocka, Maria; Mignani, Serge; Majoral, Jean Pierre; Klajnert-Maculewicz, Barbara

2015-08-15

Dendrimers due to their unique architecture may play an important role in drug delivery systems including chemotherapy, gene therapy and recently, photodynamic therapy as well. We investigated two dendrimer-photosensitizer systems in context of potential use of these systems in photodynamic therapy. The mixtures of an anionic phosphorus dendrimer of the second generation and methylene blue were studied by UV-vis spectroscopy while that of a cationic phosphorus dendrimer (third generation) and rose bengal were investigated by spectrofluorimetric methods. Spectroscopic analysis of these two systems revealed the formation of dendrimer-photosensitizer complexes via electrostatic interactions as well as π stacking. The stoichiometry of the rose bengal-cationic dendrimer complex was estimated to be 7:1 and 9:1 for the methylene blue-anionic dendrimer complex. The results suggest that these polyanionic or polycationic phosphorus dendrimers can be promising candidates as carriers in photodynamic therapy. Copyright © 2015 Elsevier B.V. All rights reserved.

[Current development of acupuncture-moxibustion in India:a case study of West Bengal].

PubMed

Yang, Yuyang; Liu, Jingyuan; Luo, Lu

2017-03-12

Acupuncture-moxibustion was introduced to India in mid-20th century and has been legislated in two provinces in India where the registration of acupuncture practitioners is implemented at present. In India, the central government recognizes that acupuncture-moxibustion is an approach of treatment and is permitted by the licensed doctor. Because of the weakness of the basic development of acupuncture-moxibustion in India, the go-vernment put great effort to support and protect their national traditional medicine. Acupuncture-moxibustion development is mainly in the folk and in the progression for the provincial and governmental legislation. In the paper, by taking West Bengal as example, the legislation, clinical application, education and scientific research of acupuncture-moxibustion are analyzed so that an approach is explored for the further development of acupuncture-moxibustion in India.

Variability in supply and cross-shelf transport of pink shrimp (Farfantepenaeus duorarum) postlarvae into western Florida Bay

USGS Publications Warehouse

Criales, Maria M.; Wang, John D.; Browder, Joan A.; Robblee, Michael B.; Jackson, Thomas L.; Hittle, Clinton D.

2006-01-01

The variability in the supply of pink shrimp (Farfantepenaeus duorarum) postlarvae and the transport mechanisms of planktonic stages were investigated with field data and simulations of transport. Postlarvae entering the nursery grounds of Florida Bay were collected for three consecutive years at channels that connect the Bay with the Gulf of Mexico, and in channels of the Middle Florida Keys that connect the southeastern margin of the Bay with the Atlantic Ocean. The influx of postlarvae in the Middle Florida Keys was low in magnitude and varied seasonally and among years. In contrast, the greater postlarval influx occurred at the northwestern border of the Bay, where there was a strong seasonal pattern with peaks in influx from July through September each year. Planktonic stages need to travel up to 150 km eastward between spawning grounds (northeast of Dry Tortugas) and nursery grounds (western Florida Bay) in about 30 days, the estimated time of planktonic development for this species. A Lagrangian trajectory model was developed to estimate the drift of planktonic stages across the SW Florida shelf. The model simulated the maximal distance traveled by planktonic stages under various assumptions of behavior.  Simulation results indicated that larvae traveling with the instantaneous current and exhibiting a diel behavior travel up to 65 km and 75% of the larvae travel only 30 km. However, the eastward distance traveled increased substantially when a larval response to tides was added to the behavioral variable (distance increased to 200 km and 85% of larvae traveled 150 km). The question is, when during larval development, and where on the shallow SW Florida shelf, does the tidal response become incorporated into the behavior of pink shrimp.

49 CFR 172.304 - Marking requirements.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 49 Transportation 2 2011-10-01 2011-10-01 false Marking requirements. 172.304 Section 172.304 Transportation Other Regulations Relating to Transportation PIPELINE AND HAZARDOUS MATERIALS SAFETY... SECURITY PLANS Marking § 172.304 Marking requirements. (a) The marking required in this subpart— (1) Must...

Classroom Mark-Recapture with Crickets

ERIC Educational Resources Information Center

Whiteley, Andrew R.; Woolfe, Jennifer; Kennedy, Kathleen; Oberbillig, David; Brewer, Carol

2007-01-01

Mark-recapture techniques are commonly used by ecologists to estimate abundance of naturally occurring animals and are an important component of ecology curricula. This investigation teaches a mark-recapture technique using store-bought crickets in 10-gallon aquaria and provides an inexpensive way to teach students about mark-recapture in a real…

Evaluation of remote sensing in control of pink bollworm in cotton. [Southern California deserts

NASA Technical Reports Server (NTRS)

Lewis, L. N. (Principal Investigator); Coleman, V. B.

1973-01-01

The author has identified the following significant results. The main objective is to evaluate the use of a satellite in monitoring the cotton production regulation program of the State of California as an aid in controlling pink bollworm infestation in the southern deserts of California. Color combined images of ERTS-1 multispectral images simulating color infrared are being used for crop identification. The status of each field (i.e., crop, bare, harvested, wet, plowed) is mapped from the imagery and is then compared to ground survey information taken at the time of ERTS-1 overflights. A computer analysis has been performed to compare field and satellite data to a crop calendar. Correlation to data has been 97% for field condition. Actual crop identification varies; cotton identification is only 63% due to lack of full season coverage.

Hypofolins A - L, ent-Labdane Diterpenoids from the Roots of Hypoestes phyllostachya 'Pink Splash'.

PubMed

Cheng, Bin; Ding, Lin-Fen; Yan, Tong; Xie, Zhang-Qiao; Zhang, Zhi-Jun; Song, Liu-Dong; Wu, Xing-De; Zhao, Qin-Shi

2018-06-01

Twelve new ent-labdane diterpenoids, hypofolins A - F (1 - 6) and hypofolins G - L (7a/7b, 8a/8b, and 9a/9b), were isolated from the roots of Hypoestes phyllostachya 'Pink Splash'. Their structures were elucidated by extensive 1D- and 2D-NMR spectroscopic and HR-MS data. The absolute configurations of 1, 2, 5, and 7a/7b were determined by single crystal X-ray diffraction and ECD analysis, as well as chemical transformations. Compounds 7a/7b, 8a/8b, and 9a/9b were isolated as three pairs of interconverting mixture of two isomers between ketone and hemiketal types. Compound 1 showed weak cytotoxicity against SMMC-7721 cell line with IC 50 value of 31.40 μm. © 2018 Wiley-VHCA AG, Zurich, Switzerland.

Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598

PubMed Central

2014-01-01

Strains of a pink-pigmented Methylobacterium sp. are effective nitrogen- (N2) fixing microsymbionts of species of the African crotalarioid genus Listia. Strain WSM2598 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated in 2002 from a Listia bainesii root nodule collected at Estcourt Research Station in South Africa. Here we describe the features of Methylobacterium sp. WSM2598, together with information and annotation of a high-quality draft genome sequence. The 7,669,765 bp draft genome is arranged in 5 scaffolds of 83 contigs, contains 7,236 protein-coding genes and 18 RNA-only encoding genes. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 G enomic E ncyclopedia for B acteria and A rchaea- R oot N odule B acteria (GEBA-RNB) project. PMID:25780498

Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598.

PubMed

Ardley, Julie; Tian, Rui; Howieson, John; Yates, Ron; Bräu, Lambert; Han, James; Lobos, Elizabeth; Huntemann, Marcel; Chen, Amy; Mavromatis, Konstantinos; Markowitz, Victor; Ivanova, Natalia; Pati, Amrita; Goodwin, Lynne; Woyke, Tanja; Kyrpides, Nikos; Reeve, Wayne

2014-01-01

Strains of a pink-pigmented Methylobacterium sp. are effective nitrogen- (N2) fixing microsymbionts of species of the African crotalarioid genus Listia. Strain WSM2598 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated in 2002 from a Listia bainesii root nodule collected at Estcourt Research Station in South Africa. Here we describe the features of Methylobacterium sp. WSM2598, together with information and annotation of a high-quality draft genome sequence. The 7,669,765 bp draft genome is arranged in 5 scaffolds of 83 contigs, contains 7,236 protein-coding genes and 18 RNA-only encoding genes. This rhizobial genome is one of 100 sequenced as part of the DOE Joint Genome Institute 2010 G enomic E ncyclopedia for B acteria and A rchaea- R oot N odule B acteria (GEBA-RNB) project.

Dietary calcein marking of shovelnose sturgeon and the effect of sunlight on mark retention

USGS Publications Warehouse

Honeyfield, D.C.; Kindschi, G.A.; Bell, T.A.; Mohler, J.W.

2011-01-01

Calcein, a fluorochrome dye, is a potential fish-marking agent that has not been evaluated in sturgeon. Shovelnose sturgeon Scaphirhynchus platorynchus (average weight, 9.7 g) were fed calcein, immersed in a calcein bath, or left unmarked to determine calcein mark intensity. In the first study, six treatments were evaluated in a two-by-three factorial arrangement. Feed was formulated with 2.0 g of SE-MARK/kg either as powder or in an encapsulated form. Sturgeon were fed the test diets for 5, 10, or 15 d. They readily ate feed containing powdered or encapsulated calcein. Sturgeon fed powdered calcein had more brilliant marks than those fed encapsulated calcein (8.27 versus 4.66 lm; P < 0.03) 6 months postexposure. Fish fed calcein for 15 d (11.26 lm) were more brilliant (P < 0.002) than fish fed for either 5 d (3.02 lm) or 10 d (5.11 lm). Post hoc comparison of the three treatment groups showed that sturgeon fed powdered calcein for 15 d (14.06 lm) were brighter (P < 0.01) than fish fed encapsulated calcein (8.46 lm) or fish immersed in calcein (9.68 lm). In the second study, previouslymarked sturgeon were exposed to sunlight for 14months to determine their retention of calcein marks. Dorsal marks were no longer visible on fish exposed to 100% sunlight after 8 weeks. Most but not all fish exposed to 20% sunlight had no discernable dorsalmarks after 8 weeks, but ventral marks at the pectoral fin girdle were present on all fish in the 0% and 20% sunlight exposure treatments. Feeding calcein for 15 d appears to have excellent potential for practical application, such as distinguishing hatchery-reared from wild fish. Ventral calcein marks remained visible after 14 months of exposure to 20% sunlight when sturgeon were reared in clear water. ?? American Fisheries Society 2011.

Molecular evidence for the occurrence of Japanese encephalitis virus genotype I and III infection associated with acute Encephalitis in Patients of West Bengal, India, 2010

PubMed Central

2012-01-01

Background Japanese encephalitis virus (JEV), a mosquito-borne zoonotic pathogen, is the sole etiologic agent of Japanese Encephalitis (JE); a neurotropic killer disease which is one of the major causes of viral encephalitis worldwide with prime public health concern. JE was first reported in the state of West Bengal, India in 1973. Since then it is being reported every year from different districts of the state, though the vaccination has already been done. Therefore, it indicates that there might be either partial coverage of the vaccine or the emergence of mutated/new strain of JEV. Considering this fact, to understand the JEV genotype distribution, we conducted a molecular epidemiological study on a total of 135 serum/cerebrospinal fluid (CSF) samples referred and/or collected from the clinically suspected patients with Acute encephalitis syndrome (AES), admitted in different district hospitals of West Bengal, India, 2010. Findings JEV etiology was confirmed in 36/135 (26.6%) and 13/61 (21.3%) 2–15 days’ febrile illness samples from AES cases by analyzing Mac-ELISA followed by RT-PCR test respectively. Phylogenetic analysis based on complete envelope gene sequences of 13 isolates showed the emergence of JEV genotype I (GI), co-circulating with genotype III (GIII). Conclusion This study represents the first report of JEV GI with GIII, co-circulating in West Bengal. The efficacy of the vaccine (derived from JEV GIII strain SA-14-14-2) to protect against emerging JEV GI needs careful evaluation. In future, JE outbreak is quite likely in the state, if this vaccine fails to protect sufficiently against GI of JEV. PMID:23153306

46 CFR 185.602 - Hull markings.

Code of Federal Regulations, 2010 CFR

2010-10-01

... 46 Shipping 7 2010-10-01 2010-10-01 false Hull markings. 185.602 Section 185.602 Shipping COAST GUARD, DEPARTMENT OF HOMELAND SECURITY (CONTINUED) SMALL PASSENGER VESSELS (UNDER 100 GROSS TONS) OPERATIONS Markings Required § 185.602 Hull markings. (a) Each vessel must be marked as required by part 67...

Paleoceanographic history of the Lower Bengal Fan during the last glacial cycle - IODP Expedition 354

NASA Astrophysics Data System (ADS)

Dekens, P. S.; Weber, M. E.; Lantzsch, H.; Das, S. K.; Williams, T.; Adhikari, R. R.; Jia, G.; Fox, L. R.; Ge, J.; Manoj, M. C.; Savian, J. F.; Reilly, B. T.; Selkin, P. A.; Meynadier, L.; Spiess, V.; France-Lanord, C.; Sharma, B.

2015-12-01

IODP Expedition 354 drilled a ~320 km long transect of seven sites on the Lower Bengal Fan at 8o N in the Northern Indian Ocean. The sediments cores recovered record a complex relationship between turbiditic and hemipelagic environments. This variability offers a unique opportunity to link our understanding of tectonic and terrestrial processes with climate and oceanography. With the exception the westernmost Site U1454, all sites show a several meter thick, hemipelagic top layer, usually representing Late Quaternary sediment. We present physical, geochemical and stable isotopic properties of this interval to establish a time frame and assess the paleoceanographic development of the region during the last glacial cycle. We sampled Site U1452C-1H continuously for the uppermost 480 cm of hemipelagic sediment in 2-cm increments. Preliminary results indicate the Toba Ash 1 (0.74 ka) is a distinct time marker in all physical properties. Furthermore, wet-bulk density as well as color reflectance b* (the red-green component) and L* (the lightness) show a dominant precession cyclicity. Hence, we are able to provide an insolation-tuned chronology for the last 200 ka (MIS1 - 7) as a preliminary age model. These records agree well with d18O records retrieved from Chinese caves. We will present a preliminary paleoceanographic proxy data to reconstruct sea-surface temperature (SST), sea-surface salinity (SSS), ice volume, marine biological productivity, nutrient supply, and deep-water circulation. These oceanographic and climate conditions are linked to changes in monsoonal strength and terrestrial input using sedimentary proxies to reconstruct chemical weathering and sediment sources and transport time. This work addresses one of the primary cruise objectives - linking monsoon variability, regional and global climate, and Bay of Bengal sediment deposition.

Biotechnological and agronomic potential of endophytic pink-pigmented methylotrophic Methylobacterium spp.

PubMed

Dourado, Manuella Nóbrega; Camargo Neves, Aline Aparecida; Santos, Daiene Souza; Araújo, Welington Luiz

2015-01-01

The genus Methylobacterium is composed of pink-pigmented facultative methylotrophic (PPFM) bacteria, which are able to synthesize carotenoids and grow on reduced organic compounds containing one carbon (C1), such as methanol and methylamine. Due to their high phenotypic plasticity, these bacteria are able to colonize different habitats, such as soil, water, and sediment, and different host plants as both endophytes and epiphytes. In plant colonization, the frequency and distribution may be influenced by plant genotype or by interactions with other associated microorganisms, which may result in increasing plant fitness. In this review, different aspects of interactions with the host plant are discussed, including their capacity to fix nitrogen, nodule the host plant, produce cytokinins, auxin and enzymes involved in the induction of systemic resistance, such as pectinase and cellulase, and therefore plant growth promotion. In addition, bacteria belonging to this group can be used to reduce environmental contamination because they are able to degrade toxic compounds, tolerate high heavy metal concentrations, and increase plant tolerance to these compounds. Moreover, genome sequencing and omics approaches have revealed genes related to plant-bacteria interactions that may be important for developing strains able to promote plant growth and protection against phytopathogens.

The E3 ligase Mule protects the heart against oxidative stress and mitochondrial dysfunction through Myc-dependent inactivation of Pgc-1α and Pink1.

PubMed

Dadson, Keith; Hauck, Ludger; Hao, Zhenyue; Grothe, Daniela; Rao, Vivek; Mak, Tak W; Billia, Filio

2017-02-02

Cardiac homeostasis requires proper control of protein turnover. Protein degradation is principally controlled by the Ubiquitin-Proteasome System. Mule is an E3 ubiquitin ligase that regulates cellular growth, DNA repair and apoptosis to maintain normal tissue architecture. However, Mule's function in the heart has yet to be described. In a screen, we found reduced Mule expression in left ventricular samples from end-stage heart failure patients. Consequently, we generated conditional cardiac-specific Mule knockout (Mule  fl/fl(y) ;mcm) mice. Mule ablation in adult Mule  fl/fl(y) ;mcm mice prevented myocardial c-Myc polyubiquitination, leading to c-Myc accumulation and subsequent reduced expression of Pgc-1α, Pink1, and mitochondrial complex proteins. Furthermore, these mice developed spontaneous cardiac hypertrophy, left ventricular dysfunction, and early mortality. Co-deletion of Mule and c-Myc rescued this phenotype. Our data supports an indispensable role for Mule in cardiac homeostasis through the regulation of mitochondrial function via maintenance of Pgc-1α and Pink1 expression and persistent negative regulation of c-Myc.

14 CFR 23.1555 - Control markings.

Code of Federal Regulations, 2014 CFR

2014-01-01

... Markings and Placards § 23.1555 Control markings. (a) Each cockpit control, other than primary flight controls and simple push button type starter switches, must be plainly marked as to its function and method... 14 Aeronautics and Space 1 2014-01-01 2014-01-01 false Control markings. 23.1555 Section 23.1555...

14 CFR 23.1555 - Control markings.

Code of Federal Regulations, 2010 CFR

2010-01-01

... Markings and Placards § 23.1555 Control markings. (a) Each cockpit control, other than primary flight controls and simple push button type starter switches, must be plainly marked as to its function and method... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Control markings. 23.1555 Section 23.1555...

14 CFR 23.1555 - Control markings.

Code of Federal Regulations, 2013 CFR

2013-01-01

... Markings and Placards § 23.1555 Control markings. (a) Each cockpit control, other than primary flight controls and simple push button type starter switches, must be plainly marked as to its function and method... 14 Aeronautics and Space 1 2013-01-01 2013-01-01 false Control markings. 23.1555 Section 23.1555...

14 CFR 23.1555 - Control markings.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Control markings. 23.1555 Section 23.1555... Markings and Placards § 23.1555 Control markings. (a) Each cockpit control, other than primary flight controls and simple push button type starter switches, must be plainly marked as to its function and method...

Escherichia coli Attenuation by Fe Electrocoagulation in Synthetic Bengal Groundwater: Effect of pH and Natural Organic Matter.

PubMed

Delaire, Caroline; van Genuchten, Case M; Nelson, Kara L; Amrose, Susan E; Gadgil, Ashok J

2015-08-18

Technologies addressing both arsenic and microbial contamination of Bengal groundwater are needed. Fe electrocoagulation (Fe-EC), a simple process relying on the dissolution of an Fe(0) anode to produce Fe(III) precipitates, has been shown to efficiently remove arsenic from groundwater at low cost. We investigated Escherichia coli (E. coli) attenuation by Fe-EC in synthetic Bengal groundwater as a function of Fe dosage rate, total Fe dosed, pH, and presence of natural organic matter (NOM). A 2.5 mM Fe dosage simultaneously achieved over 4-log E. coli attenuation and arsenic removal from 450 to below 10 μg/L. E. coli reduction was significantly enhanced at pH 6.6 compared to pH 7.5, which we linked to the decreased rate of Fe(II) oxidation at lower pH. 3 mg/L-C of NOM (Suwanee River fulvic acid) did not significantly affect E. coli attenuation. Live-dead staining and comparisons of Fe-EC with chemical coagulation controls showed that the primary mechanism of E. coli attenuation is physical removal with Fe(III) precipitates, with inactivation likely contributing as well at lower pH. Transmission electron microscopy showed that EC precipitates adhere to and bridge individual E. coli cells, resulting in large bacteria-Fe aggregates that can be removed by gravitational settling. Our results point to the promising ability of Fe-EC to treat arsenic and bacterial contamination simultaneously at low cost.

Arsenic contamination of groundwater and its health impact on residents in a village in West Bengal, India.

PubMed Central

Rahman, Mohammad Mahmudur; Sengupta, Mrinal Kumar; Ahamed, Sad; Chowdhury, Uttam Kumar; Lodh, Dilip; Hossain, Amir; Das, Bhaskar; Roy, Niladri; Saha, Kshitish Chandra; Palit, Shyamal Kanti; Chakraborti, Dipankar

2005-01-01

An in-depth study was carried out in Rajapur, an arsenic-affected village in West Bengal, India, to determine the degree of groundwater contamination with arsenic and the impact of this contamination on residents. The flow injection hydride generation atomic absorption spectrometry (FI-HG-AAS) method was used to measure arsenic concentrations in water and biological samples. Dermatologists recorded the dermatological features of arsenicosis. Out of a total of 336 hand-pumped tube-wells in Rajapur, 91% (307/336) contained arsenic at concentrations > 10 microg/l, and 63% (213/336) contained arsenic at > 50 microg/l. The type of arsenic in groundwater, the variation in concentrations of arsenic as the depth of tube-wells changed, and the iron concentration in the wells were also measured. Altogether 825 of 3500 residents were examined for skin lesions; of these, 149 had lesions caused by exposure to arsenic. Of the 420 biological samples collected and analysed, 92.6% (389) contained arsenic at concentrations that were above normal. Thus many villagers might be subclinically affected. Although five arsenic-filtering devices had been installed in Rajapur, it appears that villagers are still exposed to raised concentrations of arsenic in their drinking-water. Detailed village-level studies of arsenic-affected areas in West Bengal are required in order to understand the magnitude of contamination and its effects on people. Villagers are ill-informed about the dangers of drinking arsenic-contaminated water. The contamination could be brought under control by increasing community awareness of the dangers and implementing proper watershed management techniques that involve local people. PMID:15682249

An overlooked pink species of land iguana in the Galápagos

PubMed Central

Gentile, Gabriele; Fabiani, Anna; Marquez, Cruz; Snell, Howard L.; Snell, Heidi M.; Tapia, Washington; Sbordoni, Valerio

2009-01-01

Despite the attention given to them, the Galápagos have not yet finished offering evolutionary novelties. When Darwin visited the Galápagos, he observed both marine (Amblyrhynchus) and land (Conolophus) iguanas but did not encounter a rare pink black-striped land iguana (herein referred to as “rosada,” meaning “pink” in Spanish), which, surprisingly, remained unseen until 1986. Here, we show that substantial genetic isolation exists between the rosada and syntopic yellow forms and that the rosada is basal to extant taxonomically recognized Galápagos land iguanas. The rosada, whose present distribution is a conundrum, is a relict lineage whose origin dates back to a period when at least some of the present-day islands had not yet formed. So far, this species is the only evidence of ancient diversification along the Galápagos land iguana lineage and documents one of the oldest events of divergence ever recorded in the Galápagos. Conservation efforts are needed to prevent this form, identified by us as a good species, from extinction. PMID:19124773

A pink-pigmented, oxidative, nonmotile bacterium as a cause of opportunistic infections.

PubMed

Korvick, J A; Rihs, J D; Gilardi, G L; Yu, V L

1989-06-01

We describe two cases of bacteremia due to a pink-pigmented, oxidative, nonmotile, gram-negative, rod-shaped organism. One case occurred in a febrile neutropenic patient and another in a chronically debilitated patient with pancreatic abscess. The first patient was cured with gentamicin and ticarcillin, but the second patient died while receiving cefamandole therapy. The organisms described here are similar to Methylobacterium mesophilicum (Pseudomonas mesophilica) and the "unnamed taxon" organisms. A major difference from M mesophilicum is the lack of methanol utilization. Further distinctions between our isolates and M mesophilicum are the lack of flagella in our organisms, growth at 42 degrees C, growth on MacConkey's agar, lack of acetamide assimilation, and citrate utilization. The lack of flagella is the principle difference between our isolates and those in the unnamed taxon. Both of the isolates were resistant to the cephalosporins, but susceptible to the aminoglycosides, ticarcillin-clavulanic acid, sulfamethoxazole and trimethoprim, and imipenem. With the growing population of immunocompromised and chronically ill patients, these organisms may emerge as important pathogens.

27 CFR 28.144 - Export marks.

Code of Federal Regulations, 2010 CFR

2010-04-01

... 27 Alcohol, Tobacco Products and Firearms 1 2010-04-01 2010-04-01 false Export marks. 28.144... § 28.144 Export marks. (a) General Requirement. In addition to the marks and brands required to be... brewer shall mark the word “Export” on each container or case of beer, or the words “Beer concentrate for...