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Sample records for medium dynamics surface

  1. The dynamic deformation of a layered viscoelastic medium under surface excitation.

    PubMed

    Aglyamov, Salavat R; Wang, Shang; Karpiouk, Andrei B; Li, Jiasong; Twa, Michael; Emelianov, Stanislav Y; Larin, Kirill V

    2015-06-01

    In this study the dynamic behavior of a layered viscoelastic medium in response to the harmonic and impulsive acoustic radiation force applied to its surface was investigated both theoretically and experimentally. An analytical solution for a layered viscoelastic compressible medium in frequency and time domains was obtained using the Hankel transform. A special incompressible case was considered to model soft biological tissues. To verify our theoretical model, experiments were performed using tissue-like gel-based phantoms with varying mechanical properties. A 3.5 MHz single-element focused ultrasound transducer was used to apply the radiation force at the surface of the phantoms. A phase-sensitive optical coherence tomography system was used to track the displacements of the phantom surface. Theoretically predicted displacements were compared with experimental measurements. The role of the depth dependence of the elastic properties of a medium in its response to an acoustic pulse at the surface was studied. It was shown that the low-frequency vibrations at the surface are more sensitive to the deep layers than high-frequency ones. Therefore, the proposed model in combination with spectral analysis can be used to evaluate depth-dependent distribution of the mechanical properties based on the measurements of the surface deformation. PMID:25974168

  2. Molecular dynamics study of oil detachment from an amorphous silica surface in water medium

    NASA Astrophysics Data System (ADS)

    Chen, Jiaxuan; Si, Hao; Chen, Wenyang

    2015-10-01

    In this paper, the mechanism of oil detachment from optical glass in water medium is studied by using molecular dynamics simulation. At the beginning, some undecane molecules are adsorbed on the amorphous silica surface to get contaminated glass. Upon addition of 6000 water molecules, most of the undecane molecules on the substrate surface can be detached from an amorphous silica surface through three stages. The formation of different directions of water channels is vital for oil detachment. The electrostatic interaction of water substrate contributes to disturbing the aggregates of undecane molecules and the H-bonding interaction between the water molecules is helpful for the oil puddle away from the substrate. However, there is still some oil molecules residue on the substrate surface after water cleaning. The simulation results showed that the specific ring potential well of amorphous silica surface will hinder the detachment of oil molecules. We also find that the formation of the specific ring potential well is related to the number of atoms and the average radius in silica atomic rings. Increasing the upward lift force, which acts on the hydrocarbon tail of oil molecules, will be benefit to clear the oil pollution residues from the glass surface.

  3. Increasing the Thermal Conductivity of Graphene-Polyamide-6,6 Nanocomposites by Surface-Grafted Polymer Chains: Calculation with Molecular Dynamics and Effective-Medium Approximation.

    PubMed

    Gao, Yangyang; Müller-Plathe, Florian

    2016-02-25

    By employing reverse nonequilibrium molecular dynamics simulations in a full atomistic resolution, the effect of surface-grafted chains on the thermal conductivity of graphene-polyamide-6.6 (PA) nanocomposites has been investigated. The interfacial thermal conductivity perpendicular to the graphene plane is proportional to the grafting density, while it first increases and then saturates with the grafting length. Meanwhile, the intrinsic in-plane thermal conductivity of graphene drops sharply as the grafting density increases. The maximum overall thermal conductivity of nanocomposites appears at an intermediate grafting density because of these two competing effects. The thermal conductivity of the composite parallel to the graphene plane increases with the grafting density and grafting length which is attributed to better interfacial coupling between graphene and PA. There exists an optimal balance between grafting density and grafting length to obtain the highest interfacial and parallel thermal conductivity. Two empirical formulas are suggested, which quantitatively account for the effects of grafting length and density on the interfacial and parallel thermal conductivity. Combined with effective medium approximation, for ungrafted graphene in random orientation, the model overestimates the thermal conductivity at low graphene volume fraction (f < 10%) compared with experiments, while it underestimates it at high graphene volume fraction (f > 10%). For unoriented grafted graphene, the model matches the experimental results well. In short, this work provides some valuable guides to obtain the nanocomposites with high thermal conductivity by grafting chain on the surface of graphene. PMID:26800434

  4. Medium-scale surface temperature mission: MUST

    NASA Astrophysics Data System (ADS)

    Duthil, Philippe; Vidal, Alain; Dubet, Dominique

    1997-12-01

    The medium scale surface temperature (MUST) mission, studied in the frame of a European Commission (DG XII) contract, is a large swath (1200 Km), medium resolution (250 m) thermal infra-red imager mission devoted to retrieve the land surface temperature in order to serve various applications. These applications are firstly those concerned with the soil and vegetation water status (agriculture, irrigation and water resources management) as evapotranspiration and soil moisture can be inferred from surface temperature through relevant models. The other applications are either directly using the surface temperature (some frosts conditions assessment) or the air temperature that is itself derived from surface temperature extrapolation (urban heat island, some air frosts conditions). The project basically aimed to demonstrate the relevance and efficiency of the MUST mission products in the relevant application fields and to assess the economical benefits of the mission. Also in the course of the study the design of a medium resolution, large swath thermal imager, providing the appropriate performance required by the users while compact and affordable, was produced. Finally the operational implementation of the system and especially the ground segment was considered.

  5. Dynamics at Surfaces

    SciTech Connect

    Sylvia Ceyer, Nancy Ryan Gray

    2010-05-04

    The 2009 Gordon Conference on Dynamics at Surfaces is the 30th anniversary of a meeting held every two years that is attended by leading researchers in the area of experimental and theoretical dynamics at liquid and solid surfaces. The conference focuses on the dynamics of the interaction of molecules with either liquid or solid surfaces, the dynamics of the outermost layer of liquid and solid surfaces and the dynamics at the liquid-solid interface. Specific topics that are featured include state-to-state dynamics, non-adiabatic interactions in molecule-metal systems, photon induced desorption from semiconductor and metal surfaces, ultrafast x-ray and electron diffraction as probes of the dynamics of ablation, ultrafast vibrational spectroscopy of water surface dynamics, dynamics of a single adsorbate, growth at nano-scale mineral surfaces, dynamics of atom recombination on interstellar dust grains and the dynamics of the interaction of water with lipid bilayers. The conference brings together investigators from a variety of scientific disciplines including chemistry, physics, materials science, geology and biophysics.

  6. Nonlinear Dynamical Friction in a Gaseous Medium

    NASA Astrophysics Data System (ADS)

    Kim, Hyosun; Kim, Woong-Tae

    2009-10-01

    Using high-resolution, two-dimensional hydrodynamic simulations, we investigate nonlinear gravitational responses of gas to, and the resulting drag force on, a very massive perturber Mp moving at velocity Vp through a uniform gaseous medium of adiabatic sound speed a ∞. We model the perturber as a Plummer potential with softening radius rs , and run various models with differing A=GM_p/(a_∞ ^2r_s) and M=V_p/a_∞ by imposing cylindrical symmetry with respect to the line of perturber motion. For supersonic cases, a massive perturber quickly develops nonlinear flows that produce a detached bow shock and a vortex ring, which is unlike in the linear cases where Mach cones are bounded by low-amplitude Mach waves. The flows behind the shock are initially non-steady, displaying quasi-periodic, overstable oscillations of the vortex ring and the shock. The vortex ring is eventually shed downstream and the flows evolve toward a quasi-steady state where the density wake near the perturber is in near hydrostatic equilibrium. We find that the detached shock distance δ and the nonlinear drag force F depend solely on η = A/M^2-1) such that δ/rs = η and F/F_lin=(η/2)^{-0.45} for 100 > η>2, where F lin is the linear drag force of Ostriker. The reduction of F compared with F lin is caused by front-back symmetry in the nonlinear density wakes. In subsonic cases, the flows without involving a shock do not readily reach a steady state. Nevertheless, the subsonic density wake near a perturber is close to being hydrostatic, resulting in the drag force similar to the linear case. Our results suggest that dynamical friction of a very massive object as in a merger of black holes near a galaxy center will take considerably longer than the linear prediction.

  7. Collective dynamics in strongly coupled dusty plasma medium

    NASA Astrophysics Data System (ADS)

    Das, Amita; Dharodi, Vikram; Tiwari, Sanat; Tiwari

    2014-12-01

    A simplified description of dynamical response of strongly coupled medium is desirable in many contexts of physics. The dusty plasma medium can play an important role in this regard due to its uniqueness, as its dynamical response typically falls within the perceptible grasp of human senses. Furthermore, even at room temperature and normal densities it can be easily prepared to be in a strongly coupled regime. A simplified phenomenological fluid model based on the visco - elastic behaviour of the medium is often invoked to represent the collective dynamical response of a strongly coupled dusty plasma medium. The manuscript reviews the role of this particular Generalized Hydrodynamic (GHD) fluid model in capturing the collective properties exhibited by the medium. In addition the paper also provides new insights on the collective behaviour predicted by the model for the medium, in terms of coherent structures, instabilities, transport and mixing properties.

  8. Tear film dynamics: modeling the glycocalyx as a porous medium

    NASA Astrophysics Data System (ADS)

    Siddique, Javed; Mastroberardinob, , Antonio; Braun, Richard; Anderson, Daniel

    2015-11-01

    The human tear film is a complex fluid structure composed of multiple layers: an aqueous layer that comprises most of the film and an outermost thinner lipid layer coat a forest of large transmembrane mucins at the epithelial surface. The glycocalyx helps provide stability to the ocular surface by assisting the tear film to wet it. It is also permeable to water, but less so to ions. We formulate a thin film model based on lubrication theory in order to understand the dynamics between the aqueous layer and the glycocalyx, which we treat as a rigid porous medium. We present numerical solutions for the evolution of the tear film and discuss the roles played by the key parameters of the system. This work was supported by the Simons Foundation Grant No. 281839.

  9. NONLINEAR DYNAMICAL FRICTION IN A GASEOUS MEDIUM

    SciTech Connect

    Kim, Hyosun; Kim, Woong-Tae E-mail: wkim@astro.snu.ac.k

    2009-10-01

    Using high-resolution, two-dimensional hydrodynamic simulations, we investigate nonlinear gravitational responses of gas to, and the resulting drag force on, a very massive perturber M{sub p} moving at velocity V{sub p} through a uniform gaseous medium of adiabatic sound speed a{sub i}nfinity. We model the perturber as a Plummer potential with softening radius r{sub s} , and run various models with differing A=GM{sub p}/(a{sub i}nfinity{sup 2}r{sub s}) and M=V{sub p}/a{sub i}nfinity by imposing cylindrical symmetry with respect to the line of perturber motion. For supersonic cases, a massive perturber quickly develops nonlinear flows that produce a detached bow shock and a vortex ring, which is unlike in the linear cases where Mach cones are bounded by low-amplitude Mach waves. The flows behind the shock are initially non-steady, displaying quasi-periodic, overstable oscillations of the vortex ring and the shock. The vortex ring is eventually shed downstream and the flows evolve toward a quasi-steady state where the density wake near the perturber is in near hydrostatic equilibrium. We find that the detached shock distance delta and the nonlinear drag force F depend solely on eta=A/(M{sup 2}-1) such that delta/r{sub s} = eta and F/F{sub lin}=(eta/2){sup -0.45} for 100 >eta>2, where F {sub lin} is the linear drag force of Ostriker. The reduction of F compared with F{sub lin} is caused by front-back symmetry in the nonlinear density wakes. In subsonic cases, the flows without involving a shock do not readily reach a steady state. Nevertheless, the subsonic density wake near a perturber is close to being hydrostatic, resulting in the drag force similar to the linear case. Our results suggest that dynamical friction of a very massive object as in a merger of black holes near a galaxy center will take considerably longer than the linear prediction.

  10. Hypernuclei and in-medium chiral dynamics

    NASA Astrophysics Data System (ADS)

    Finelli, P.

    2008-04-01

    A recently introduced relativistic nuclear energy density functional, constrained by features of low-energy QCD, is extended to describe the structure of hypernuclei. The density-dependent mean field and the spin-orbit potential of a Λ-hyperon in a nucleus, are consistently calculated using the SU(3) extension of in-medium chiral perturbation theory. The leading long-range ΛN interaction arises from kaon-exchange and 2π-exchange with a Σ-hyperon in the intermediate state. Scalar and vector mean fields, originating from in-medium changes of the quark condensates, produce a sizeable short-range spin-orbit interaction. The model, when applied to oxygen as a test case, provides a natural explanation for the smallness of the effective Λ spin-orbit potential: an almost complete cancellation between the background contributions (scalar and vector) and the long-range terms generated by two-pion exchange.

  11. Dynamics of osmosis in a porous medium

    PubMed Central

    Cardoso, Silvana S. S.; Cartwright, Julyan H. E.

    2014-01-01

    We derive from kinetic theory, fluid mechanics and thermodynamics the minimal continuum-level equations governing the flow of a binary, non-electrolytic mixture in an isotropic porous medium with osmotic effects. For dilute mixtures, these equations are linear and in this limit provide a theoretical basis for the widely used semi-empirical relations of Kedem & Katchalsky (Kedem & Katchalsky 1958 Biochim. Biophys. Acta 27, 229–246 (doi:10.1016/0006-3002(58)90330-5), which have hitherto been validated experimentally but not theoretically. The above linearity between the fluxes and the driving forces breaks down for concentrated or non-ideal mixtures, for which our equations go beyond the Kedem–Katchalsky formulation. We show that the heretofore empirical solute permeability coefficient reflects the momentum transfer between the solute molecules that are rejected at a pore entrance and the solvent molecules entering the pore space; it can be related to the inefficiency of a Maxwellian demi-demon. PMID:26064566

  12. Dynamics of osmosis in a porous medium.

    PubMed

    Cardoso, Silvana S S; Cartwright, Julyan H E

    2014-11-01

    We derive from kinetic theory, fluid mechanics and thermodynamics the minimal continuum-level equations governing the flow of a binary, non-electrolytic mixture in an isotropic porous medium with osmotic effects. For dilute mixtures, these equations are linear and in this limit provide a theoretical basis for the widely used semi-empirical relations of Kedem & Katchalsky (Kedem & Katchalsky 1958 Biochim. Biophys. Acta 27, 229-246 (doi:10.1016/0006-3002(58)90330-5), which have hitherto been validated experimentally but not theoretically. The above linearity between the fluxes and the driving forces breaks down for concentrated or non-ideal mixtures, for which our equations go beyond the Kedem-Katchalsky formulation. We show that the heretofore empirical solute permeability coefficient reflects the momentum transfer between the solute molecules that are rejected at a pore entrance and the solvent molecules entering the pore space; it can be related to the inefficiency of a Maxwellian demi-demon. PMID:26064566

  13. Fluid Dynamics with Free Surfaces

    Energy Science and Technology Software Center (ESTSC)

    1992-02-01

    RIPPLE is a two-dimensional, transient, free surface incompressible fluid dynamics program. It allows multiple free surfaces with surface tension and wall adhesion forces and has a partial cell treatment which allows curved boundaries and interior obstacles.

  14. Pulse dynamics in an unstable medium

    SciTech Connect

    Balmforth, N.J.; Ierley, G.R.; Worthing, R.

    1995-05-01

    A study is presented of a one-dimensional, nonlinear partial differential equation that describes evolution of dispersive, long-wave instability. The solutions, under certain specific conditions, take the form of trains of well-separated pulses. The dynamics of such patterns of pulses is investigated using singular perturbation theory and with numerical simulation. These tools permit the formulation of a theory of pulse interaction, and enable the mapping out of the range of behavior in parameter space. There are regimes in which steady trains form; such states can be studied with the asymptotic, pulse-interaction theory. In other regimes, pulse trains are unstable to global, wave-like modes or its radiation. This can precipitate more violent phenomena involving pulse creation, or generate periodic states which may follow Shil`nikov`s route to temporal chaos. The asymptotic theory is generalized lo take some account of radiative dynamics. In the limit of small dispersion, steady trains largely cease to exist; the system follows various pathways to temporal complexity and typical-bifurcation sequences are sketched out. The investigation guides us to a critical appraisal of the asymptotic theory and uncovers the wealth of different types of behavior present in the system.

  15. Nanomotor dynamics in a chemically oscillating medium

    NASA Astrophysics Data System (ADS)

    Robertson, Bryan; Kapral, Raymond

    2015-04-01

    Synthetic nanomotors powered by chemical reactions have potential uses as cargo transport vehicles in both in vivo and in vitro applications. In many situations, motors will have to operate in out-of-equilibrium complex chemically reacting media, which supply fuel to the motors and remove the products they produce. Using molecular simulation and mean-field theory, this paper describes some of the new features that arise when a chemically powered nanomotor, operating through a diffusiophoretic mechanism, moves in an environment that supports an oscillatory chemical reaction network. It is shown how oscillations in the concentrations in chemical species in the environment give rise to oscillatory motor dynamics. More importantly, since the catalytic reactions on the motor that are responsible for its propulsion couple to the bulk phase reaction network, the motor can change its local environment. This process can give rise to distinctive spatiotemporal structures in reaction-diffusion media that occur as a result of active motor motion. Such locally induced nonequilibrium structure will play an important role in applications that involve motor dynamics in complex chemical media.

  16. Nanomotor dynamics in a chemically oscillating medium

    SciTech Connect

    Robertson, Bryan Kapral, Raymond

    2015-04-21

    Synthetic nanomotors powered by chemical reactions have potential uses as cargo transport vehicles in both in vivo and in vitro applications. In many situations, motors will have to operate in out-of-equilibrium complex chemically reacting media, which supply fuel to the motors and remove the products they produce. Using molecular simulation and mean-field theory, this paper describes some of the new features that arise when a chemically powered nanomotor, operating through a diffusiophoretic mechanism, moves in an environment that supports an oscillatory chemical reaction network. It is shown how oscillations in the concentrations in chemical species in the environment give rise to oscillatory motor dynamics. More importantly, since the catalytic reactions on the motor that are responsible for its propulsion couple to the bulk phase reaction network, the motor can change its local environment. This process can give rise to distinctive spatiotemporal structures in reaction-diffusion media that occur as a result of active motor motion. Such locally induced nonequilibrium structure will play an important role in applications that involve motor dynamics in complex chemical media.

  17. Dynamical charge fluctuations in the hadronic medium

    NASA Astrophysics Data System (ADS)

    Sharma, Bhanu; Aggarwal, Madan M.; Sahoo, Nihar Ranjan; Nayak, Tapan K.

    2015-02-01

    Dynamical charge fluctuations have been studied in ultrarelativistic heavy-ion collisions by using hadronic model simulations, such as Ultrarelativistic Quantum Molecular Dynamics (UrQMD) and Heavy Ion Jet Interaction Generator (HIJING). The evolution of fluctuations has been calculated at different time steps during the collision as well as at different observation windows in pseudorapidity (△η ) . The final state effects on the fluctuations have been investigated by varying △η and the time steps with the aim of obtaining an optimum observation window for capturing maximum fluctuations. It is found that △η between 2.0 and 3.5 gives the best coverage for the fluctuations studies. The results of these model calculations for Au+Au collisions at √{sNN} = 7.7 to 200 GeV and for Pb+Pb collisions at 2.76 TeV are presented and compared to the available experimental data from the Relativistic Heavy Ion Collider (RHIC) and the Large Hadron Collider (LHC).

  18. Dynamic scheduling of medium-grained processes on multicomputers

    SciTech Connect

    Wei, S.; Kale, L.V. )

    1989-01-01

    This book presents a scheme for dynamic scheduling of medium-grained processes. The basic scheme and its adaptive extensions are described, and contrasted with two other schemes that have been proposed. The performance of all the three schemes on a 64 processor IPSC/2 hypercube is presented and analyzed. The experimental results are shown.

  19. Effective reconstruction of dynamics of medium response spectrum

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2008-10-01

    A new algorithm is suggested to visualize the dynamics of medium response spectrum in terahertz diapason by the singly measured set of partially intersected integral characteristics of the signal. The algorithm is based on SVD method and window sliding method. The analysis, we carried out, demonstrates many advantages of the new algorithm in com-parison with the Gabor-Fourier approach, which allows obtaining the dynamics of only one spectral line for one set of measurements. Among which it is necessary to mention the possibility to get the dynamics of many spectral components simultaneously for one set of measurements as well and therefore to get the complete information about the spectrum dynamics. This allows to identify specific materials with known spectral lines and to distinguish materials with similar spectra, which is of great importance for the detection and identification of different chemicals, pharmaceutical substances and explosives. To demonstrate the efficiency of a proposed algorithm, we compare spectrum dynamics of chocolate and soap, which possess the similar spectra. Our investigation shows that their dynamics widely vary in spec-tral lines. The proposed algorithm can be also applied to voice identification and to reconstruction of a laser beam profile with a great number of local maxima. Developed algorithm allows to measure the characteristic time of medium responce. It is very important for various problems of spectroscopy.

  20. Dynamics of rising bubble inside a viscosity-stratified medium

    NASA Astrophysics Data System (ADS)

    Tripathi, Manoj; Premlata, A. R.; Sahu, Kirti

    2015-11-01

    The rising bubble dynamics in an unconfined quiescent viscosity-stratified medium has been numerically investigated. This is frequently encountered in industrial as well as natural phenomena. In spite of the large number of studies carried out on bubbles and drops, very few studies have examined the influence of viscosity stratification on bubble rise dynamics. To the best of our knowledge, none of them have isolated the effects of viscosity-stratification alone, even though it is known to influence the dynamics extensively, which is the main objective of the present study. By conducting time-dependent simulations, we present a library of bubble shapes in the Gallilei and the Eötvös numbers plane. Our results demonstrate some counter-intuitive phenomena for certain range of parameters due to the presence of viscosity stratification in the surrounding fluid. We found that in a linearly increasing viscosity medium, for certain values of parameters, bubble undergoes large deformation by forming an elongated skirt, while the skirt tends to physically separate the wake region from the rest of the surrounding fluid. This peculiar dynamics is attributed to the migration of less viscous fluid that is carried in the wake of the bubble as it rises, and thereby creating an increase.

  1. Dynamical friction for supersonic motion in a homogeneous gaseous medium

    NASA Astrophysics Data System (ADS)

    Thun, Daniel; Kuiper, Rolf; Schmidt, Franziska; Kley, Wilhelm

    2016-05-01

    Context. The supersonic motion of gravitating objects through a gaseous ambient medium constitutes a classical problem in theoretical astrophysics. Its application covers a broad range of objects and scales from planetesimals, planets, and all kind of stars up to galaxies and black holes. In particular, the dynamical friction caused by the wake that forms behind the object plays an important role for the dynamics of the system. To calculate the dynamical friction for a particular system, standard formulae based on linear theory are often used. Aims: It is our goal to check the general validity of these formulae and provide suitable expressions for the dynamical friction acting on the moving object, based on the basic physical parameters of the problem: first, the mass, radius, and velocity of the perturber; second, the gas mass density, soundspeed, and adiabatic index of the gaseous medium; and finally, the size of the forming wake. Methods: We perform dedicated sequences of high-resolution numerical studies of rigid bodies moving supersonically through a homogeneous ambient medium and calculate the total drag acting on the object, which is the sum of gravitational and hydrodynamical drag. We study cases without gravity with purely hydrodynamical drag, as well as gravitating objects. In various numerical experiments, we determine the drag force acting on the moving body and its dependence on the basic physical parameters of the problem, as given above. From the final equilibrium state of the simulations, for gravitating objects we compute the dynamical friction by direct numerical integration of the gravitational pull acting on the embedded object. Results: The numerical experiments confirm the known scaling laws for the dependence of the dynamical friction on the basic physical parameters as derived in earlier semi-analytical studies. As a new important result we find that the shock's stand-off distance is revealed as the minimum spatial interaction scale of

  2. Dynamical friction for supersonic motion in a homogeneous gaseous medium

    NASA Astrophysics Data System (ADS)

    Thun, Daniel; Kuiper, Rolf; Schmidt, Franziska; Kley, Wilhelm

    2016-04-01

    Context. The supersonic motion of gravitating objects through a gaseous ambient medium constitutes a classical problem in theoretical astrophysics. Its application covers a broad range of objects and scales from planetesimals, planets, and all kind of stars up to galaxies and black holes. In particular, the dynamical friction caused by the wake that forms behind the object plays an important role for the dynamics of the system. To calculate the dynamical friction for a particular system, standard formulae based on linear theory are often used. Aims: It is our goal to check the general validity of these formulae and provide suitable expressions for the dynamical friction acting on the moving object, based on the basic physical parameters of the problem: first, the mass, radius, and velocity of the perturber; second, the gas mass density, soundspeed, and adiabatic index of the gaseous medium; and finally, the size of the forming wake. Methods: We perform dedicated sequences of high-resolution numerical studies of rigid bodies moving supersonically through a homogeneous ambient medium and calculate the total drag acting on the object, which is the sum of gravitational and hydrodynamical drag. We study cases without gravity with purely hydrodynamical drag, as well as gravitating objects. In various numerical experiments, we determine the drag force acting on the moving body and its dependence on the basic physical parameters of the problem, as given above. From the final equilibrium state of the simulations, for gravitating objects we compute the dynamical friction by direct numerical integration of the gravitational pull acting on the embedded object. Results: The numerical experiments confirm the known scaling laws for the dependence of the dynamical friction on the basic physical parameters as derived in earlier semi-analytical studies. As a new important result we find that the shock's stand-off distance is revealed as the minimum spatial interaction scale of

  3. Dynamics of rising bubble inside a viscosity-stratified medium

    NASA Astrophysics Data System (ADS)

    Premlata, A. R.; Tripathi, Manoj Kumar; Sahu, Kirti Chandra

    2015-07-01

    The rising bubble dynamics in an unconfined quiescent viscosity-stratified medium has been numerically investigated. This is frequently encountered in industrial as well as natural phenomena. In spite of the large number of studies carried out on bubbles and drops, very few studies have examined the influence of viscosity stratification on bubble rise dynamics. To the best of our knowledge, none of them have isolated the effects of viscosity-stratification alone, even though it is known to influence the dynamics extensively, which is the main objective of the present study. By conducting time-dependent simulations, we present a library of bubble shapes in the Galilei and the Eötvös numbers plane. Our results demonstrate some counter-intuitive phenomena for certain range of parameters due to the presence of viscosity stratification in the surrounding fluid. We found that in a linearly increasing viscosity medium, for certain values of parameters, bubble undergoes large deformation by forming an elongated skirt, while the skirt tends to physically separate the wake region from the rest of the surrounding fluid. This peculiar dynamics is attributed to the migration of less viscous fluid that is carried in the wake of the bubble as it rises, and thereby creating an increasingly larger viscosity contrast between the fluid occupied in the wake region and the surrounding fluid, unlike that observed in a constant viscosity medium. It is also observed that the effect of viscosity stratification is qualitatively different for different regimes of the dimensionless parameters. In future, it will be interesting to investigate this problem in three-dimensions.

  4. Dynamics of a supernova envelope in a cloudy interstellar medium

    NASA Astrophysics Data System (ADS)

    Korolev, V. V.; Vasiliev, E. O.; Kovalenko, I. G.; Shchekinov, Yu. A.

    2015-07-01

    The evolution of a supernova remnant in a cloudy medium as a function of the volume filling factor of the clouds is studied in a three-dimensional axially symmetrical model. The model includes the mixing of heavy elements (metals) ejected by the supernova and their contribution to radiative losses. The interaction of the supernova envelope with the cloudy phase of the interstellar medium leads to nonsimultaneous, and on average earlier, onsets of the radiative phase in different parts of the supernova envelope. Growth in the volume filling factor f leads to a decrease in the time for the transition of the envelope to the radiative phase and a decrease in the envelope's mean radius, due to the increased energy losses by the envelope in the cloudy medium. When the development of hydrodynamical instabilities in the supernova envelope is efficient, the thermal energy falls as E t ~ t -2.3, for the propagation of the supernova remnant through either a homogeneous or a cloudy medium. When the volume filling factor is f ≳ 0.1, a layer with excess kinetic energy andmomentumforms far behind the global shock front from the supernova, which traps the hot gas of the cavity in the central part of the supernova remnant. Metals ejected by the supernova are also enclosed in the central region of the remnant, where the initial (high) metallicity is essentially preserved. Thus, the interaction of the supernova envelope with the cloudy interstellar medium appreciably changes the dynamics and structure of the distribution of the gas in the remnant. This affects the observational characteristics of the remnant, in particularly, leading to substantial fluctuations of the emissionmeasure of the gas with T > 105 K and the velocity dispersion of the ionized gas.

  5. Dynamical Evolution of Interacting Photon Pulses in Rydberg Medium

    NASA Astrophysics Data System (ADS)

    He, Bing; Yang, Liu; Wu, Jin-Hui; Zhang, Zhaoyang; Xiao, Min

    2016-05-01

    We present a study to simulate the absorption and propagation of single photon pulses under their mutual effective interaction in Rydberg atomic ensemble.The study is based on the complete dynamics of the involved quantum fields in Rydberg medium of electromagnetically induced transparency, and considers the tunable control fields to stop and regenerate photon pulses. We find that photons of opposite-sign detunings can have distinct dynamical behaviors when they approach each other. The space-time dependent dissipation of photons under mutual interaction and the passages toward the stopped photons with different control fields are also illustrated in terms of the evolutions of their quantum field profiles. These processes can be applied to implementing various quantum devices such as photon switchers and photon-photon gates.

  6. Surface structure determines dynamic wetting

    PubMed Central

    Wang, Jiayu; Do-Quang, Minh; Cannon, James J.; Yue, Feng; Suzuki, Yuji; Amberg, Gustav; Shiomi, Junichiro

    2015-01-01

    Liquid wetting of a surface is omnipresent in nature and the advance of micro-fabrication and assembly techniques in recent years offers increasing ability to control this phenomenon. Here, we identify how surface roughness influences the initial dynamic spreading of a partially wetting droplet by studying the spreading on a solid substrate patterned with microstructures just a few micrometers in size. We reveal that the roughness influence can be quantified in terms of a line friction coefficient for the energy dissipation rate at the contact line, and that this can be described in a simple formula in terms of the geometrical parameters of the roughness and the line-friction coefficient of the planar surface. We further identify a criterion to predict if the spreading will be controlled by this surface roughness or by liquid inertia. Our results point to the possibility of selectively controlling the wetting behavior by engineering the surface structure. PMID:25683872

  7. Nanoparticle growth and surface chemistry changes in cell-conditioned culture medium.

    PubMed

    Kendall, Michaela; Hodges, Nikolas J; Whitwell, Harry; Tyrrell, Jess; Cangul, Hakan

    2015-02-01

    When biomolecules attach to engineered nanoparticle (ENP) surfaces, they confer the particles with a new biological identity. Physical format may also radically alter, changing ENP stability and agglomeration state within seconds. In order to measure which biomolecules are associated with early ENP growth, we studied ENPs in conditioned medium from A549 cell culture, using dynamic light scattering (DLS) and linear trap quadrupole electron transfer dissociation mass spectrometry. Two types of 100 nm polystyrene particles (one uncoated and one with an amine functionalized surface) were used to measure the influence of surface type. In identically prepared conditioned medium, agglomeration was visible in all samples after 1 h, but was variable, indicating inter-sample variability in secretion rates and extracellular medium conditions. In samples conditioned for 1 h or more, ENP agglomeration rates varied significantly. Agglomerate size measured by DLS was well correlated with surface sequestered peptide number for uncoated but not for amine coated polystyrene ENPs. Amine-coated ENPs grew much faster and into larger agglomerates associated with fewer sequestered peptides, but including significant sequestered lactose dehydrogenase. We conclude that interference with extracellular peptide balance and oxidoreductase activity via sequestration is worthy of further study, as increased oxidative stress via this new mechanism may be important for cell toxicity. PMID:25533102

  8. Nanoparticle growth and surface chemistry changes in cell-conditioned culture medium

    PubMed Central

    Kendall, Michaela; Hodges, Nikolas J.; Whitwell, Harry; Tyrrell, Jess; Cangul, Hakan

    2015-01-01

    When biomolecules attach to engineered nanoparticle (ENP) surfaces, they confer the particles with a new biological identity. Physical format may also radically alter, changing ENP stability and agglomeration state within seconds. In order to measure which biomolecules are associated with early ENP growth, we studied ENPs in conditioned medium from A549 cell culture, using dynamic light scattering (DLS) and linear trap quadrupole electron transfer dissociation mass spectrometry. Two types of 100 nm polystyrene particles (one uncoated and one with an amine functionalized surface) were used to measure the influence of surface type. In identically prepared conditioned medium, agglomeration was visible in all samples after 1 h, but was variable, indicating inter-sample variability in secretion rates and extracellular medium conditions. In samples conditioned for 1 h or more, ENP agglomeration rates varied significantly. Agglomerate size measured by DLS was well correlated with surface sequestered peptide number for uncoated but not for amine coated polystyrene ENPs. Amine-coated ENPs grew much faster and into larger agglomerates associated with fewer sequestered peptides, but including significant sequestered lactose dehydrogenase. We conclude that interference with extracellular peptide balance and oxidoreductase activity via sequestration is worthy of further study, as increased oxidative stress via this new mechanism may be important for cell toxicity. PMID:25533102

  9. The dynamic mathematical model of heavy-medium cyclone

    SciTech Connect

    Xu Jianping

    1997-12-31

    For ascertaining the effect of the various variables during the coal separation process of heavy medium (HM) cyclone, a dynamic mathematical model for simulating the separating process of the HM cyclone has been developed based on data obtained through both laboratory and industrial experiments. As evidenced by the result of study, increase to a certain extent of inlet pressure and media-coal ratio may result in higher separating precision. The effect of rheological property of the suspension is particularly important, and often plays a decisive role in this respect. The research-derived model can either be used for predicting the separating process and performance or for effecting process control of a HM cyclone through simulating its operation.

  10. Optical Surface Transformation: Changing the optical surface by homogeneous optic-null medium at will

    NASA Astrophysics Data System (ADS)

    Sun, Fei; He, Sailing

    2015-10-01

    A new theory on designing electromagnetic/optical devices is proposed, namely, an optical surface transformation (OST). One arbitrary surface can establish the corresponding relationship with another surface entirely optically with an optic-null medium (ONM), (i.e. the electromagnetic wave propagates from one surface to its equivalent surface without any phase delay). Many novel optical devices can be designed by an OST with the help of an ONM. Compared with traditional devices designed by Transformation Optics, our optical surface-reshaping devices have two main advantages. Firstly, the design process is very simple (i.e. we do not need to consider any mathematics on how to make a coordinate transformation, and what we need to do is simply to design the shapes of the input and the output surfaces of the devices). Secondly, we only need one homogeneous anisotropic medium to realize all devices designed by this method. Our method will explore a new way to design novel optical devices without considering any coordinate transformations.

  11. Optical Surface Transformation: Changing the optical surface by homogeneous optic-null medium at will

    PubMed Central

    Sun, Fei; He, Sailing

    2015-01-01

    A new theory on designing electromagnetic/optical devices is proposed, namely, an optical surface transformation (OST). One arbitrary surface can establish the corresponding relationship with another surface entirely optically with an optic-null medium (ONM), (i.e. the electromagnetic wave propagates from one surface to its equivalent surface without any phase delay). Many novel optical devices can be designed by an OST with the help of an ONM. Compared with traditional devices designed by Transformation Optics, our optical surface-reshaping devices have two main advantages. Firstly, the design process is very simple (i.e. we do not need to consider any mathematics on how to make a coordinate transformation, and what we need to do is simply to design the shapes of the input and the output surfaces of the devices). Secondly, we only need one homogeneous anisotropic medium to realize all devices designed by this method. Our method will explore a new way to design novel optical devices without considering any coordinate transformations. PMID:26515406

  12. Dynamical Modeling of Surface Tension

    NASA Technical Reports Server (NTRS)

    Brackbill, Jeremiah U.; Kothe, Douglas B.

    1996-01-01

    In a recent review it is said that free-surface flows 'represent some of the difficult remaining challenges in computational fluid dynamics'. There has been progress with the development of new approaches to treating interfaces, such as the level-set method and the improvement of older methods such as the VOF method. A common theme of many of the new developments has been the regularization of discontinuities at the interface. One example of this approach is the continuum surface force (CSF) formulation for surface tension, which replaces the surface stress given by Laplace's equation by an equivalent volume force. Here, we describe how CSF formulation might be made more useful. Specifically, we consider a derivation of the CSF equations from a minimization of surface energy as outlined by Jacqmin (1996). This reformulation suggests that if one eliminates the computation of curvature in terms of a unit normal vector, parasitic currents may be eliminated. For this reformulation to work, it is necessary that transition region thickness be controlled. Various means for this, in addition to the one discussed by Jacqmin (1996), are discussed.

  13. Dynamics of Nanostructures at Surfaces

    SciTech Connect

    Schmid, Andreas K.

    2001-02-28

    Currently, much effort is being devoted to the goal of achieving useful nanotechnologies, which depend on the ability to control and manipulate things on a very small scale. One promising approach to the construction of nanostructures is 'self-assembly', which means that under suitable conditions desired nanostructures might form automatically due to physical and chemical forces. Remarkably, the forces controlling such self-assembly mechanisms are only poorly understood, even though highly successful examples of self-assembly are known in nature (e.g., complex biochemical machinery regularly self-assembles in the conditions inside living cells). This talk will highlight basic measurements of fundamental forces governing the dynamics of nanostructures at prototypical metal surfaces. We use advanced surface microscopy techniques to track the motions of very small structures in real time and up to atomic resolution. One classic example of self-organized nanostructures are networks of surface dislocations (linear crystal defects). The direct observation of thermally activated atomic motions of dislocations in a reconstructed gold surface allows us to measure the forces stabilizing the remarkable long-range order of this nanostructure. In another example, the rapid migration of nano-scale tin crystals deposited on a pure copper surface was traced to an atomic repulsion between tin atoms absorbed on the crystal surface and bronze alloy formed in the footprint of the tin crystals. It is intriguing to consider the clusters as simple chemo-mechanical energy transducers, essentially tiny linear motors built of 100,000 Sn atoms. We can support this view by providing estimates of the power and energy-efficiency of these nano-motors.

  14. Effective medium potentials for molecule-surface interactions: H2 on Cu and Ni surfaces

    NASA Astrophysics Data System (ADS)

    Nørskov, J. K.

    1989-06-01

    A new approximate method is developed for the calculation of the adiabatic potential energy surface for a molecule outside a metal surface. It is computationally fast enough to be useful in simulations of the dynamics of adsorbing and desorbing molecules. The method is characterized by the fact that the functional form of the total energy expression is derived from density functional theory, that each of the terms entering can be given a precise physical interpretation, and that most of the parameters entering can be calculated, within the local density approximation. The method is explicitly derived for H2 outside metal surfaces and the applicability is illustrated for H2 adsorbing on various Cu and Ni surfaces. Although very approximate, the calculated potentials seem to include a number of features observed experimentally: Ni is more active in dissociating H2 than Cu, and open surfaces are more active than close-packed ones. Moreover, the method is simple enough that one can contemplate studying variations in dissociation pathways over the surface unit cell. For the Cu surfaces these variations are substantial accounting for at least part of the variation of the sticking coefficient with the kinetic energy of the incoming molecule. Because of the transparent nature of the energy expression, all these trends can be given a simple physical interpretation.

  15. In-medium chiral SU (3) dynamics and hypernuclear structure

    NASA Astrophysics Data System (ADS)

    Finelli, P.; Kaiser, N.; Vretenar, D.; Weise, W.

    2007-12-01

    A previously introduced relativistic energy density functional, successfully applied to ordinary nuclei, is extended to hypernuclei. The density-dependent mean field and the spin-orbit potential are consistently calculated for a Λ hyperon in the nucleus using the SU (3) extension of in-medium chiral perturbation theory. The leading long range ΛN interaction arises from kaon-exchange and 2π-exchange with Σ hyperon in the intermediate state. Scalar and vector mean fields reflecting in-medium changes of the quark condensates are constrained by QCD sum rules. The model, applied to oxygen as a test case, describes spectroscopic data in good agreement with experiment. In particular, the smallness of the Λ spin-orbit interaction finds a natural explanation in terms of an almost complete cancellation between scalar-vector background contributions and long-range terms generated by two-pion exchange.

  16. Slow dynamics of ablated zone observed around the density fluctuation ridge of fluid medium

    NASA Astrophysics Data System (ADS)

    Koizumi, Masato; Kulinich, Sergei A.; Shimizu, Yoshiki; Ito, Tsuyohito

    2013-12-01

    In-situ shadowgraph images were recorded to follow and study processes during laser ablation of Sn targets in pressurized carbon dioxide medium. The dynamics of the low-density region with a bubble-like structure forming by ablated Sn in CO2 at different pressures was studied. The lifetime of the region is shown to be pressure-dependent, being the longest near the density fluctuation ridge of the medium, i.e., at 8.8 MPa at 40 °C. The present work is to report on the slower dynamics of ablated zone near the medium density fluctuation maximum, which can be used in nanoparticle synthesis and processing.

  17. Photochemical dynamics of surface oriented molecules

    SciTech Connect

    Ho, W.

    1992-01-01

    The period 8/01/91-7/31/92 is the first year of a new project titled Photochemical Dynamics of Surface Oriented Molecules'', initiated with DOE Support. The main objective of this project is to understand the dynamics of elementary chemical reactions by studying photochemical dynamics of surface-oriented molecules. In addition, the mechanisms of photon-surface interactions need to be elucidated. The strategy is to carry out experiments to measure the translational energy distribution, as a function of the angle from the surface normal, of the photoproducts by time-of-flight (TOF) technique by varying the photon wavelength, intensity, polarization, and pulse duration. By choosing adsorbates with different bonding configuration, the effects of adsorbate orientation on surface photochemical dynamics can be studied.

  18. AN ATTRACTOR FOR THE DYNAMICAL STATE OF THE INTRACLUSTER MEDIUM

    SciTech Connect

    Juncher, Diana; Hansen, Steen H.; Maccio, Andrea V.

    2012-02-20

    Galaxy clusters provide us with important information about the cosmology of our universe. Observations of the X-ray radiation or of the Sunyaev-Zel'dovich effect allow us to measure the density and temperature of the hot intergalactic medium between the galaxies in a cluster, which then allow us to calculate the total mass of the galaxy cluster. However, no simple connection between the density and the temperature profiles has been identified. Here, we use controlled high-resolution numerical simulations to identify a relation between the density and temperature of the gas in equilibrated galaxy clusters. We demonstrate that the temperature-density relation is a real attractor, by showing that a wide range of equilibrated structures all move toward the attractor when perturbed and subsequently allowed to relax. For structures that have undergone sufficient perturbations for this connection to hold, one can therefore extract the mass profile directly from the X-ray intensity profile.

  19. Dynamics of filament formation in a Kerr medium

    SciTech Connect

    Centurion, Martin; Pu Ye; Tsang, Mankei; Psaltis, Demetri

    2005-06-15

    We have studied the large-scale beam breakup and filamentation of femtosecond pulses in a Kerr medium. We have experimentally monitored the formation of stable light filaments, conical emission, and interactions between filaments. Three major stages lead to the formation of stable light filaments: First the beam breaks up into a pattern of connected lines (constellation), then filaments form on the constellations, and finally the filaments release a fraction of their energy through conical emission. We observed a phase transition to a faster filamentation rate at the onset of conical emission. We attribute this to the interaction of conical emissions with the constellation which creates additional filaments. Numerical simulations show good agreement with the experimental results.

  20. Dynamics of Wetting of Ultra Hydrophobic Surfaces

    NASA Astrophysics Data System (ADS)

    Mohammad Karim, Alireza; Kim, Jeong-Hyun; Rothstein, Jonathan; Kavehpour, Pirouz; Mechanical and Industrial Engineering, University of Massachusetts, Amherst Collaboration

    2013-11-01

    Controlling the surface wettability of hydrophobic and super hydrophobic surfaces has extensive industrial applications ranging from coating, painting and printing technology and waterproof clothing to efficiency increase in power and water plants. This requires enhancing the knowledge about the dynamics of wetting on these hydrophobic surfaces. We have done experimental investigation on the dynamics of wetting on hydrophobic surfaces by looking deeply in to the dependency of the dynamic contact angles both advancing and receding on the velocity of the three-phase boundary (Solid/Liquid/Gas interface) using the Wilhelmy plate method with different ultra-hydrophobic surfaces. Several fluids with different surface tension and viscosity are used to study the effect of physical properties of liquids on the governing laws.

  1. Laser surface modification of boronickelized medium carbon steel

    NASA Astrophysics Data System (ADS)

    Bartkowska, Aneta; Pertek, Aleksandra; Kulka, Michał; Klimek, Leszek

    2015-11-01

    A two-step process was applied to produce the multicomponent boride layers. Boronickelizing consisted of nickel plating and diffusion boriding. Two different methods of heat treatment of boronickelized C45 steel were used: a typical through-hardening, and a laser surface modification with remelting. Microstructure and some mechanical properties of these layers were examined. Microstructural characterization was studied using optical microscope, Scanning Electron Microscope, energy-dispersive X-ray microanalysis, Electron Back-Scatter Diffraction and X-ray diffraction. The laser modification improved wear resistance, cohesion as well as low-cycle fatigue of the boronickelized layer. Compressive stresses, occurring after laser remelting, could be the reason for the advantageous mechanical behavior of the layer.

  2. Nonuniversal surface behavior of dynamic phase transitions.

    PubMed

    Riego, Patricia; Berger, Andreas

    2015-06-01

    We have studied the dynamic phase transition (DPT) of the kinetic Ising model in systems with surfaces within the mean-field approximation. Varying the surface exchange coupling strength J(s), the amplitude of the externally applied oscillating field h(0), and its period P, we explore the dynamic behavior of the layer-dependent magnetization and the associated DPTs. The surface phase diagram shows several features that resemble those of the equilibrium case, with an extraordinary bulk transition and a surface transition for high J(s) values, independent from the value of h(0). For low J(s), however, h(0) is found to be a crucial parameter that leads to nonuniversal surface behavior at the ordinary bulk transition point. Specifically, we observed here a bulk-supported surface DPT for high field amplitudes h(0) and correspondingly short critical periods P(c), whereas this surface transition simultaneous to the bulk one is suppressed for slow critical dynamics occurring for low values of h(0). The suppression of the DPT for low h(0) not only occurs for the topmost surface layer, but also affects a significant number of subsurface layers. We find that the key physical quantity that explains this nonuniversal behavior is the time correlation between the dynamic surface and bulk magnetizations at the bulk critical point. This time correlation has to pass a threshold value to trigger a bulk-induced DPT in the surface layers. Otherwise, dynamic phase transitions are absent at the surface in stark contrast to the equilibrium behavior of the corresponding thermodynamic Ising model. Also, we have analyzed the penetration depth of the dynamically ordered phase for the surface DPT that occurs for large J(s) values. Here we find that the penetration depth depends strongly on J(s) and behaves identically to the corresponding equilibrium Ising model. PMID:26172695

  3. Uncertainty and Sensitivity in Surface Dynamics Modeling

    NASA Astrophysics Data System (ADS)

    Kettner, Albert J.; Syvitski, James P. M.

    2016-05-01

    Papers for this special issue on 'Uncertainty and Sensitivity in Surface Dynamics Modeling' heralds from papers submitted after the 2014 annual meeting of the Community Surface Dynamics Modeling System or CSDMS. CSDMS facilitates a diverse community of experts (now in 68 countries) that collectively investigate the Earth's surface-the dynamic interface between lithosphere, hydrosphere, cryosphere, and atmosphere, by promoting, developing, supporting and disseminating integrated open source software modules. By organizing more than 1500 researchers, CSDMS has the privilege of identifying community strengths and weaknesses in the practice of software development. We recognize, for example, that progress has been slow on identifying and quantifying uncertainty and sensitivity in numerical modeling of earth's surface dynamics. This special issue is meant to raise awareness for these important subjects and highlight state-of-the-art progress.

  4. DYNAMICALLY DRIVEN EVOLUTION OF THE INTERSTELLAR MEDIUM IN M51

    SciTech Connect

    Koda, Jin; Scoville, Nick; Potts, Ashley E.; Carpenter, John M.; Corder, Stuartt A.; Patience, Jenny; Sargent, Anneila I.; Sawada, Tsuyoshi; La Vigne, Misty A.; Vogel, Stuart N.; White, Stephen M.; Zauderer, B. Ashley; Pound, Marc W.; Wright, Melvyn C. H.; Plambeck, Richard L.; Bock, Douglas C. J.; Hawkins, David; Hodges, Mark; Lamb, James W.; Kemball, Athol

    2009-08-01

    Massive star formation occurs in giant molecular clouds (GMCs); an understanding of the evolution of GMCs is a prerequisite to develop theories of star formation and galaxy evolution. We report the highest-fidelity observations of the grand-design spiral galaxy M51 in carbon monoxide (CO) emission, revealing the evolution of GMCs vis-a-vis the large-scale galactic structure and dynamics. The most massive GMCs (giant molecular associations (GMAs)) are first assembled and then broken up as the gas flow through the spiral arms. The GMAs and their H{sub 2} molecules are not fully dissociated into atomic gas as predicted in stellar feedback scenarios, but are fragmented into smaller GMCs upon leaving the spiral arms. The remnants of GMAs are detected as the chains of GMCs that emerge from the spiral arms into interarm regions. The kinematic shear within the spiral arms is sufficient to unbind the GMAs against self-gravity. We conclude that the evolution of GMCs is driven by large-scale galactic dynamics-their coagulation into GMAs is due to spiral arm streaming motions upon entering the arms, followed by fragmentation due to shear as they leave the arms on the downstream side. In M51, the majority of the gas remains molecular from arm entry through the interarm region and into the next spiral arm passage.

  5. Crowds as an Excitable Medium for Spiral Wave Dynamics

    NASA Astrophysics Data System (ADS)

    Welsh, Andrea; Greco, Edwin; Fenton, Flavio

    Spiral wave (SW) patterns are studied in many physical, biological, and chemical excitable systems. Of particular importance are SW of electrical activity that develop in the heart and give rise to arrhythmias such as tachycardia (single SW) and fibrillation (multiple SWs). We investigate if a crowd of people given simple rules for activation and deactivation, modeled on cardiac cells, can act as a living simulation for SW dynamics. For group sizes ranging from 50 to 650 people we demonstrate, experimentally, the existence of stable spiral waves and of spiral wave breakup leading to chaotic dynamics. Numerical simulation predicts the simple rules lead to well define wave fronts. People, however, respond with various degrees of anticipation and misinformation. This human behavior can lead to smoothed fronts or even lead to spiral wave breakup and chaos. We present a new cell model that includes variations in reaction to account for the observed behavior in crowds. This model may be useful in the study of coupling and decoupling of cardiac cells that lead to arrhythmic behavior. Supported by NSF.

  6. Surface dynamics of liquids in porous media.

    PubMed

    Korb, J P

    2001-01-01

    We report remarkable differences in the 1H nuclear magnetic relaxation dispersion data (NMRD) between water and other common aprotic solvents such as acetone when in contact with high surface area calibrated microporous chromatographic silica glasses that contain trace paramagnetic impurities located at or close to the pore surface. All these differences have been related to the particular chemical behaviors and dynamics of these liquids at the pore surface. We apply this technique to probe the structure and dynamics of water and oil at the surface of calibrated macroporous systems, where similar surface dynamics effects have been observed. This technique is also applied to follow the first hydration stage of a white cement-paste. Last, we present an analysis of the magnetic field dependence of 1H nuclear relaxation data to exhibit the microporosity of ultra high performance concretes. PMID:11445312

  7. Backscattering of linearly polarized light from turbid tissue-like scattering medium with rough surface

    NASA Astrophysics Data System (ADS)

    Doronin, Alexander; Tchvialeva, Lioudmila; Markhvida, Igor; Lee, Tim K.; Meglinski, Igor

    2016-07-01

    In the framework of further development of a unified computational tool for the needs of biomedical optics, we introduce an electric field Monte Carlo (MC) model for simulation of backscattering of coherent linearly polarized light from a turbid tissue-like scattering medium with a rough surface. We consider the laser speckle patterns formation and the role of surface roughness in the depolarization of linearly polarized light backscattered from the medium. The mutual phase shifts due to the photons' pathlength difference within the medium and due to reflection/refraction on the rough surface of the medium are taken into account. The validation of the model includes the creation of the phantoms of various roughness and optical properties, measurements of co- and cross-polarized components of the backscattered/reflected light, its analysis and extensive computer modeling accelerated by parallel computing on the NVIDIA graphics processing units using compute unified device architecture (CUDA). The analysis of the spatial intensity distribution is based on second-order statistics that shows a strong correlation with the surface roughness, both with the results of modeling and experiment. The results of modeling show a good agreement with the results of experimental measurements on phantoms mimicking human skin. The developed MC approach can be used for the direct simulation of light scattered by the turbid scattering medium with various roughness of the surface.

  8. On the Rupture Dynamics of Shallow Dip-Slip Faulting in a Stratified Medium

    NASA Astrophysics Data System (ADS)

    Uenishi, Koji

    2015-04-01

    One significant feature of a shallow dip-slip earthquake is the broken symmetry of seismic motion in the proximity of the rupturing fault plane. In general, the strong motion is much larger on the hanging wall than on the footwall, but the mechanics behind this asymmetry has not been wholly understood yet. Therefore, in this contribution, based on finite difference calculations and dynamic photoelasticity, we try to deepen our understanding on the rupture dynamics of a shallow dip-slip fault plane numerically as well as experimentally. In our two-dimensional crack-like rupture models, a flat vertical or inclined fault plane is prepared in a monolithic (first model) or stratified (second model) linear elastic medium. In the basic first model, as predicted numerically by Uenishi and Madariaga (Eos 2005), the primary fault rupture approaching the horizontal free surface may induce four Rayleigh-type waves, two Rayleigh waves propagating along the free surface to the far field and the other two interface waves travelling back downwards along the ruptured fault plane. In the case of the inclined fault plane, the interaction of the interface and Rayleigh waves may generate a strong shear wave (corner wave) and cause stronger disturbances in the hanging wall. The corner wave may exist only when the fault plane is asymmetrically inclined. On the contrary, in the second model, symmetry of seismic motion may be broken even in geometrically symmetric cases if the secondary rupture is allowed at an interface between geological layers. For instance, if primary vertical fault rupture propagates from depth and interferes with a horizontal interface obeying a tensile fracture criterion, the interface segments on which the primary fault rupture produces dynamic compression (in the relatively rising hanging wall) may remain unbroken and only some interface segments in the subsiding footwall may be fractured in tension. That is, in the hanging wall, the dynamic disturbances in the

  9. Formation of bubbly horizon in liquid-saturated porous medium by surface temperature oscillation

    NASA Astrophysics Data System (ADS)

    Goldobin, Denis S.; Krauzin, Pavel V.

    2015-12-01

    We study nonisothermal diffusion transport of a weakly soluble substance in a liquid-saturated porous medium in contact with a reservoir of this substance. The surface temperature of the porous medium half-space oscillates in time, which results in a decaying solubility wave propagating deep into the porous medium. In this system, zones of saturated solution and nondissolved phase coexist with ones of undersaturated solution. The effect is first considered for the case of annual oscillation of the surface temperature of water-saturated ground in contact with the atmosphere. We reveal the phenomenon of formation of a near-surface bubbly horizon due to temperature oscillation. An analytical theory of the phenomenon is developed. Further, the treatment is extended to the case of higher frequency oscillations and the case of weakly soluble solids and liquids.

  10. Formation of bubbly horizon in liquid-saturated porous medium by surface temperature oscillation.

    PubMed

    Goldobin, Denis S; Krauzin, Pavel V

    2015-12-01

    We study nonisothermal diffusion transport of a weakly soluble substance in a liquid-saturated porous medium in contact with a reservoir of this substance. The surface temperature of the porous medium half-space oscillates in time, which results in a decaying solubility wave propagating deep into the porous medium. In this system, zones of saturated solution and nondissolved phase coexist with ones of undersaturated solution. The effect is first considered for the case of annual oscillation of the surface temperature of water-saturated ground in contact with the atmosphere. We reveal the phenomenon of formation of a near-surface bubbly horizon due to temperature oscillation. An analytical theory of the phenomenon is developed. Further, the treatment is extended to the case of higher frequency oscillations and the case of weakly soluble solids and liquids. PMID:26764828

  11. Intersonic and Supersonic ruptures in a model of dynamic rupture in a layered medium

    NASA Astrophysics Data System (ADS)

    Ma, X.; Elbanna, A. E.

    2014-12-01

    The velocity structure in the lithosphere is quite complex and is rarely homogeneous. Wave reflection, transmission, and diffraction from the boundaries of the different layers and inclusions are expected to lead to a rich dynamic response and significantly affect rupture propagation on embedded faults. Here, we report our work on modeling dynamic rupture in an elastic domain with an embedded soft (stiff) layer as a first step towards modeling rupture propagation in realistic velocity structures. We use the Finite Element method (Pylith) to simulate rupture on a 2D in-plane fault embedded in an elastic full space. The simulated domain is 30 km wide and 100km long. Absorbing boundary conditions are used around the edges of the domain to simulate an infinite extension in all directions. The fault operates under linear slip-weakening friction law. We initiate the rupture by artificially overstressing a localized region near the left edge of the fault. We consider embedded soft/stiff layers with 20% to 60% reduction/increase of wave velocity respectively. The embedded layers are placed at different distances from the fault surface. We observed that the existence of a soft layer significantly shortens the transition length to supershear propagation through the Burridge-Andrews mechanism. The higher the material contrast, the shorter the transition length to supershear propagation becomes. We also observe that supershear rupture could be generated at pretress values that are lower than what is theoretically predicted for a homogeneous medium. We find that the distance from the lower boundary of the soft layer to the fault surface has a stronger influence on the supershear transition length as opposed to the thickness of the soft layer. In the existence of an embedded stiffer layer we found that rupture could propagate faster than the fault zone P-wave speed. In this case, the propagating rupture generate two Mach cones; one is associated with the shear wave, and the

  12. The Shock and Vibration Bulletin. Part 3: Structure Medium Interaction, Case Studies in Dynamics

    NASA Technical Reports Server (NTRS)

    1979-01-01

    Structure and medium interactions topics are addressed. Topics include: a failure analysis of underground concrete structures subjected to blast loadings, an optimization design procedure for concrete slabs, and a discussion of the transient response of a cylindrical shell submerged in a fluid. Case studies in dynamics are presented which include an examination of a shock isolation platform for a seasparrow launcher, a discussion of hydrofoil fatigue load environments, and an investigation of the dynamic characteristics of turbine generators and low tuned foundations.

  13. Dynamic Land Surface Classifcations using Microwave Frequencies

    NASA Astrophysics Data System (ADS)

    Jackson, H.; Tian, Y.; Peters-Lidard, C. D.; Harrison, K. W.

    2014-12-01

    Land surface emissivity in microwave frequencies is critical to the remote sensing of soil moisture, precipitation, and vegetation. Different land surfaces have different spectral signatures in the microwave portions of the electromagnetic spectrum. Their spatial and temporal behaviors are also highly variable. These properties are yet not well understood in microwave frequencies, despite their capability in detecting water-related variables in the atmosphere and land surface. A classification scheme was developed to stratify the Earth's land surfaces based on their seasonally dynamic microwave signatures. An unsupervised clustering approach was used identify and distinguish data groupings along two microwave based indicies. Land surface data clusters were mapped to determine their spatial relationships to known land cover groupings. Differences in land surface clusters were analyzed in their spatial consistency and their direction and magnitude of land surface change. It was found that vegetation and topography were the predominant contributors to change between seasons. Land surface extremes of sandy desert and closed canopy tropical forest displayed minimal intra-annual variability while transitional zones, such as the Sahel and North American temperate forests, exhibited the most variability. Distinct microwave signatures varied between seasons along a latittudinal gradient. Overall variability in land surface types increased at high lattitudes. This classification will help inform research studies maniputlating the microwave frequencies of the electromagnetic spectrum to better characterize land surface dynamics, and will be very useful in the validation of radiative transfer models and quantification of uncertainty in global precipitation monitoring.

  14. Dynamic aspects of the Southern-Hemisphere medium-scale waves during the southern summer season

    NASA Technical Reports Server (NTRS)

    Chen, Tsing-Chang; Yen, Ming-Cheng; Nune, Durga P.

    1987-01-01

    The role of medium-scale waves on three dynamic aspects of the Southern-Hemisphere general circulation is examined using data generated by the FGGE analyses of the ECMWF. The momentum and sensible heat transports by the medium-scale waves are discussed. The effects of medium-scale waves on atmospheric circulation of the Southern Hemisphere during the summer, in particular the vacillation of atmospheric energetics, are investigated. The horizontal and vertical structures and the transport properties of this wave regime and their relation to downstream development in the Southern Hemisphere are analyzed. It is observed that medium-scale waves supply about a half of the total eddy transport of sensible heat and momentum; the wave regime contributes to the time average of various energy contents and energetic components of atmospheric motion during the southern summer; and the wave regime is amplified during the developing stages of downstream development.

  15. Functional dynamics of cell surface membrane proteins

    NASA Astrophysics Data System (ADS)

    Nishida, Noritaka; Osawa, Masanori; Takeuchi, Koh; Imai, Shunsuke; Stampoulis, Pavlos; Kofuku, Yutaka; Ueda, Takumi; Shimada, Ichio

    2014-04-01

    Cell surface receptors are integral membrane proteins that receive external stimuli, and transmit signals across plasma membranes. In the conventional view of receptor activation, ligand binding to the extracellular side of the receptor induces conformational changes, which convert the structure of the receptor into an active conformation. However, recent NMR studies of cell surface membrane proteins have revealed that their structures are more dynamic than previously envisioned, and they fluctuate between multiple conformations in an equilibrium on various timescales. In addition, NMR analyses, along with biochemical and cell biological experiments indicated that such dynamical properties are critical for the proper functions of the receptors. In this review, we will describe several NMR studies that revealed direct linkage between the structural dynamics and the functions of the cell surface membrane proteins, such as G-protein coupled receptors (GPCRs), ion channels, membrane transporters, and cell adhesion molecules.

  16. Rank 0 invariant solutions of dynamics of two-phase medium

    NASA Astrophysics Data System (ADS)

    Panov, Alexandr

    2016-08-01

    A system of partial differential equations which describes dynamics of two-phase medium is considered. Lie algebra of symmetry group of this system was found. For some 4-dimensional subalgebras of invariant solutions is found. All other 4-dimensional subalgebras will give only partial invariant solutions of this system.

  17. Live Theatre: A Dynamic Medium for Engaging with Intercultural Education Research

    ERIC Educational Resources Information Center

    Nelson, Cynthia D.

    2013-01-01

    In this paper, I discuss live theatre as a highly effective and dynamic medium for facilitating meaningful engagement with research on intercultural education. I make the case that ethnographic, or research-based, theatre can productively showcase challenging social issues and the sometimes confusing, poignant and humorous complexities of…

  18. Dynamics of polymer thin films and surfaces

    NASA Astrophysics Data System (ADS)

    Fakhraai, Zahra

    2007-12-01

    The dynamics of thin polymer films display many differences from the bulk dynamics. Different modes of motions in polymers are affected by confinement in different ways. The enhancement in the dynamics of some modes of motion can cause anomalies in the glass transition temperature (Tg) of thin films, while other modes of motion such as diffusion can be substantially slowed down due to the confinement effects. In this thesis, different modes of dynamics are probed using different techniques. The interface healing of two identical polymer surfaces is used as a probe of segmental motion in the direction normal to the plane of the films and it is shown that this mode of motion is slowed down at temperatures above bulk glass transition, while the glass transition itself is decreased indicating that the type of motion responsible for the glass transition is enhanced. The glass transition measurements at different cooling rates indicate that this enhancement only happens at temperatures close to or below bulk glass transition temperature and it is not expected to be detected at higher temperatures where the system is in the melt state. It is shown that the sample preparation technique is not a factor in observing this enhanced dynamics, while the existence of the free surface can be important in observed reductions in the glass transition temperature. The dynamics near the free surface is further studied using a novel nano-deformation technique, and it is shown that the dynamics near the free surface is in fact enhanced compared to the bulk dynamics and this enhancement is increased as the temperature is decreased further below Tg. It is also shown that this mode of relaxation is much different from the bulk modes of relaxations, and a direct relationship between this enhanced motion and Tg reduction in thin films can be established. The results presented in this thesis can lead to a possible universal picture that can resolve the behavior of different modes of motions in

  19. Glassy Dynamics Altered by a Free Surface

    NASA Astrophysics Data System (ADS)

    Tsui, Ophelia

    Studies of polymer dynamics in thin films showed that a highly mobile region exists at the free surface of most if not all polymers. In this talk, I shall review some of these observations, with highlights given to the recent findings that chain flexibility and connectivity may on occasions be necessary for the free surface to exercise its influence. Afterward, I shall ponder on how the influence of the free surface may penetrate as far as several polymer radii of gyration into the inner region, as found both in experiments and simulations. Near the glass transition temperature, our MD simulations showed that the dynamics consist mainly of string-like particle hopping motions, as found by others. Importantly, as the temperature decreases, the hopping motions become increasingly repetitive and back-and-forth, contributing no structural relaxations. We propose that structural relaxations are then brought about by pair-interactions between strings. Near the free surface, however, similar repetitive hopping motions are only observed sufficiently far removed from the free surface. We propose that the free surface induces a penetrating surface mobile region by breaking the memory in the particle dynamics. A possible mechanism based on string interactions will be discussed. We are grateful to the support of NSF through Project DMR-1310536 and Hong Kong GRF Grant 15301014.

  20. Surface treatment of a polypropylene film with a nitrogen DBD at medium pressure

    NASA Astrophysics Data System (ADS)

    Morent, R.; de Geyter, N.; Gengembre, L.; Leys, C.; Payen, E.; van Vlierberghe, S.; Schacht, E.

    2008-09-01

    Surface treatment of polymer films is usually necessary to improve surface wetting and adhesion characteristics. Traditional liquid chemical processes have several disadvantages in contrast to dry finishing processes, like plasma technology. Dielectric barrier discharges at atmospheric pressure are extensively studied for surface treatment, however, almost no research has been done on surface treatment with a dielectric barrier discharge at medium pressure. Therefore, in this paper, a polypropylene (PP) film is plasma-treated with a dielectric barrier discharge (DBD) in nitrogen at medium pressure (5.0 kPa). The surface properties of the plasma-treated samples are examined using contact angle measurements, X-ray photoelectron spectroscopy (XPS) and atomic force microscopy (AFM). Results show that the surface wettability is significantly enhanced after plasma treatment. The incorporation of nitrogen on the surface is significant (10 at%), demonstrating the ability of the used DBD set-up to generate nitrogen-containing functional groups on the PP surface. Nevertheless, a considerable amount of oxygen (10 at%) is incorporated onto the PP surface underlining the extreme reactivity of oxygen active species and the difficulty in overcoming the air contamination problem. Moreover, AFM analysis reveals that the nitrogen plasma creates large changes in the surface morphology of the PP film due to the selective etching of the amorphous regions of the polymer film.

  1. SATELLITE DYNAMICS ON THE LAPLACE SURFACE

    SciTech Connect

    Tremaine, Scott; Touma, Jihad; Namouni, Fathi E-mail: jihad.touma@gmail.com

    2009-03-15

    The orbital dynamics of most planetary satellites is governed by the quadrupole moment from the equatorial bulge of the host planet and the tidal field from the Sun. On the Laplace surface, the long-term orbital evolution driven by the combined effects of these forces is zero, so that orbits have a fixed orientation and shape. The 'classical' Laplace surface is defined for circular orbits, and coincides with the planet's equator at small planetocentric distances and with its orbital plane at large distances. A dissipative circumplanetary disk should settle to this surface, and hence satellites formed from such a disk are likely to orbit in or near the classical Laplace surface. This paper studies the properties of Laplace surfaces. Our principal results are: (1) if the planetary obliquity exceeds 68.{sup 0}875, there is a range of semimajor axes in which the classical Laplace surface is unstable; (2) at some obliquities and planetocentric distances, there is a distinct Laplace surface consisting of nested eccentric orbits, which bifurcates from the classical Laplace surface at the point where instability sets in; (3) there is also a 'polar' Laplace surface perpendicular to the line of nodes of the planetary equator on the planetary orbit; (4) for circular orbits, the polar Laplace surface is stable at small planetocentric distances and unstable at large distances; (5) at the onset of instability, this polar Laplace surface bifurcates into two polar Laplace surfaces composed of nested eccentric orbits.

  2. Nanorod mediated surface plasmon resonance sensor based on effective medium theory

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A novel nanorod mediated surface plasmon resonance (SPR) sensor was investigated for enhancing sensitivity of the sensor. The theoretical model containing an anisotropic layer of nanorod was investigated using four-layer Fresnel equations and effective medium theory. The properties of the nanorod me...

  3. Dislocation-driven surface dynamics on solids.

    PubMed

    Kodambaka, S; Khare, S V; Swiech, W; Ohmori, K; Petrov, I; Greene, J E

    2004-05-01

    Dislocations are line defects that bound plastically deformed regions in crystalline solids. Dislocations terminating on the surface of materials can strongly influence nanostructural and interfacial stability, mechanical properties, chemical reactions, transport phenomena, and other surface processes. While most theoretical and experimental studies have focused on dislocation motion in bulk solids under applied stress and step formation due to dislocations at surfaces during crystal growth, very little is known about the effects of dislocations on surface dynamics and morphological evolution. Here we investigate the near-equilibrium dynamics of surface-terminated dislocations using low-energy electron microscopy. We observe, in real time, the thermally driven nucleation and shape-preserving growth of spiral steps rotating at constant temperature-dependent angular velocities around cores of dislocations terminating on the (111) surface of TiN in the absence of applied external stress or net mass change. We attribute this phenomenon to point-defect migration from the bulk to the surface along dislocation lines. Our results demonstrate that dislocation-mediated surface roughening can occur even in the absence of deposition or evaporation, and provide fundamental insights into mechanisms controlling nanostructural stability. PMID:15129275

  4. A dynamical model of supernova feedback: gas outflows from the interstellar medium

    NASA Astrophysics Data System (ADS)

    Lagos, Claudia del P.; Lacey, Cedric G.; Baugh, Carlton M.

    2013-12-01

    We present a dynamical model of supernova feedback which follows the evolution of pressurized bubbles driven by supernovae in a multiphase interstellar medium (ISM). The bubbles are followed until the point of break-out into the halo, starting from an initial adiabatic phase to a radiative phase. We show that a key property which sets the fate of bubbles in the ISM is the gas surface density, through the work done by the expansion of bubbles and its role in setting the gas scaleheight. The multiphase description of the ISM is essential, and neglecting it leads to order-of-magnitude differences in the predicted outflow rates. We compare our predicted mass loading and outflow velocities to observations of local and high-redshift galaxies and find good agreement over a wide range of stellar masses and velocities. With the aim of analysing the dependence of the mass loading of the outflow, β (i.e. the ratio between the outflow and star formation rates), on galaxy properties, we embed our model in the galaxy formation simulation, GALFORM, set in the Λ cold dark matter framework. We find that a dependence of β solely on the circular velocity, as is widely assumed in the literature, is actually a poor description of the outflow rate, as large variations with redshift and galaxy properties are obtained. Moreover, we find that below a circular velocity of ≈80 km s-1, the mass loading saturates. A more fundamental relation is that between β and the gas scaleheight of the disc, hg, and the gas fraction, fgas, as β ∝ h^{1.1}_g f^{0.4}_gas, or the gas surface density, Σg, and the gas fraction, as β ∝ Σ ^{-0.6}_g f^{0.8}_gas. We find that using the new mass loading model leads to a shallower faint-end slope in the predicted optical and near-IR galaxy luminosity functions.

  5. DYNAMICS OF PLASMID TRANSFER ON SURFACES

    EPA Science Inventory

    A protocol was developed to study the dynamics of growth and plasmid transfer in surface populations of bacteria. his method allows for quantitative estimates of cell population densities over time, as well as microscopic observations of colony growth and interactions. sing this ...

  6. ACTIVE MEDIA: Dynamics of growth of inhomogeneities in the active medium of a liquid laser

    NASA Astrophysics Data System (ADS)

    Barikhin, B. A.; Ivanov, A. Yu; Kudryavkin, E. V.; Nedolugov, V. I.

    1991-07-01

    Fast cinematography of holograms and of shadow and interference patterns was combined with an acoustic method in a study of the dynamics of growth of inhomogeneities in the active medium of a coaxially pumped dye laser. The main mechanism of the formation of these inhomogeneities was related to acoustic waves created by the deformation of the walls of a dye cell created by electrical pulses applied to the pump flashlamp. Multipulse operation of this laser could be achieved and the off-duty factor could be reduced if the active medium was excited by the strongest possible pump pulses.

  7. How the solar dynamics can influence the Sun-Earth medium term relationship

    NASA Astrophysics Data System (ADS)

    Turck-Chièze, Sylvaine; Lefebvre, Sandrine

    2011-02-01

    We recall how the Sun is introduced in the present climatic models and discuss why the solar standard model (SSM) framework is insufficient to describe the Sun-Earth medium term relationship. We then report on the different sources of variability. The SoHO mission allows a comparison between two successive solar minima and puts new constraints on the internal rotation profile. The coming space missions SDO and PICARD will add crucial information on internal circulations and on the superficial asphericity. The interplay between the solar dynamics and terrestrial atmospheric models is in its infancy, it calls for medium term uninterrupted solar observations which will take benefit of a formation flying concept.

  8. Changing Emulsion Dynamics with Heterogeneous Surface Wettability

    NASA Astrophysics Data System (ADS)

    Tsai, Peichun Amy; Meng, Qiang; Zhang, Yali; Li, Jiang; Lammertink, Rob; Chen, Haosheng

    2015-11-01

    We elucidate the effect of heterogeneous surface wettability on the morphology and dynamics of microfluidic emulsions, generated by a co-flowing device. We first design a useful methodology of modifying a micro-capillary with desired heterogeneous wettability, such as alternating hydrophilic and hydrophobic regions. Subsequently, the effects of flow rates and heterogeneous wettability on the emulsion morphology and motion in the micro-capillary are investigated. Our experimental data reveal a universal critical time scale of advective emulsions, above which the microfluidic emulsions remain intact, whereas below this time-scale emulsions become adhesive or inverse. A simple model based on a force balance can be used to explain this critical transition. These results show a control of emulsion dynamics by tuning the droplet size and the Capillary number, the ratio of viscous to surface effects, with heterogeneous surface wettability.

  9. Lateral plume spreading in a medium size river plume using surface Lagrangian drifters

    NASA Astrophysics Data System (ADS)

    Kakoulaki, Georgia; MacDonald, Daniel; Cole, Kelly

    2016-04-01

    Groups of 27 Lagrangian drifters deployed in the Merrimack River plume over twelve tides, with river discharges ranging between 150-800 m3/s, are used to understand the external forcing mechanisms responsible for the extent of spreading in river plumes. The transition of buoyant flow from a confined estuary to an unconfined coastal ocean introduces the complicated phenomenon of lateral spreading, which occurs preferentially near the surface and results in a flow that spreads laterally as plume water propagates forward in the direction of mean flow. In this work, the temporal and spatial scales of the active spreading region are estimated in the sampled plumes and related to environmental parameters at the river mouth such as inflow river discharge, initial drifter velocity at the point of release, initial reduced gravity and initial internal wave speed. The initial wave speed was found to be the environmental parameter that best predicts the magnitude of the spatial and temporal scales of the active spreading region. Previous studies have asserted the importance of initial plume parameters in near-field plume evolution and here we extrapolate this idea to the mid-field. Interestingly, we find that that lateral plume spreading is arrested at approximately one inertial radius from the river mouth. We therefore propose that the shutdown of spreading is controlled almost exclusively by Coriolis force and it is responsible for converting spreading motion to spinning motion after the mid field region. The outcomes of this research are widely applicable to other energetic, medium size river plume systems and to the author's knowledge this is the first study to estimate lateral plume expansion using observations beyond the immediate near field region of a river plume. This work will provide further development in understanding plume dynamics and the fundamental physical processes that influence coastal ecosystems.

  10. A dynamic and stationary rheological study of erythrocytes incubated in a glucose medium.

    PubMed

    Riquelme, Bibiana; Foresto, Patricia; D'Arrigo, Mabel; Valverde, Juana; Rasia, Rodolfo

    2005-02-28

    A higher than normal glucose concentration in a suspending medium may produce non-enzymatic glycosylation of erythrocyte proteins. This process can modify the viscoelastic properties of erythrocytes. In this paper, we studied the possible relationship between glucose concentration in a suspending medium and erythrocyte rheological parameters. Human venous blood was obtained from the antecubital veins of 10 healthy volunteers. Blood samples were anticoagulated with EDTA and centrifuged. Red blood cells (RBCs) were washed and subsequently divided in aliquots, which were incubated in vitro with glucose solutions of different concentrations. Dynamic and stationary viscoelastic parameters of RBCs were determined by laser diffractometry in an Erythrodeformeter. Aggregate shape parameter (ASP) of the RBCs was determined by digital image processing. Significant changes were observed both in ASP and in rheological parameters when the glucose concentration in the medium was increased, demonstrating that a glucose concentration as low as 1% induces alterations in the mechanical properties of RBCs. PMID:15680283

  11. Dynamic wetting on anisotropic patterned surfaces

    NASA Astrophysics Data System (ADS)

    Do-Quang, Minh; Wang, Jiayu; Nita, Satoshi; Shiomi, Junichiro; Amberg, Gustav; Physiochemical fluid mechanics Team; Maruyama-Chiashi Laboratory Team

    2014-11-01

    Dynamic wetting, as occurs when a droplet of a wetting liquid is brought in contact with a dry solid, is important in various engineering processes, such as printing, coating, and lubrication. Our overall aim is to investigate if and how the detailed properties of the solid surface influence the dynamics of wetting. We have recently quantified the hindering effect of fairly isotropic micron-sized patterns on the substrate. Here we will study highly anisotropic surfaces, such as parallel grooves, either perpendicular or parallel to an advancing contact line. This is done by detailed phase field simulations and experiments on structured silicon surfaces. The dynamic wetting behavior of drops on the grooved surfaces is governed by the combined interplay of the wetting line friction and the internal viscous dissipation. Influence of roughness is quantified in terms of the energy dissipation rate at the contact line using the experiment-simulation combined analysis. The energy dissipation of the contact line at the different part of the groove will be discussed. The performance of the model is assessed by comparing its predictions with the experimental data. This work was financially supported in part by, the Japan Society for the Promotion of Science (J.W., S.N., and J.S) and Swedish Governmental Agency for Innovation Systems (M.D.-Q. and G.A).

  12. Dynamics of surface dipole and tripole solitons in nonlocal nonlinear media with optical lattice field

    NASA Astrophysics Data System (ADS)

    Hong, Woo-Pyo; Jung, Young-Dae

    2013-10-01

    We find the existence conditions for stationary dipole and tripole surface solitons formed at the interface of a nonlocal nonlinear medium and a lattice with linearly modulated frequency. We investigate how the degree of nonlocality, the depth, and the modulation frequency of the optical lattice field affect on the existence of the surface solitons and their dynamics. The relationship between the power and the model parameters is identified. The stability of the surface dipole and tripole solitons is numerically investigated.

  13. Development of an extended BIEM and its application to the analysis of earthquake dynamic rupture interacting with a medium interface

    NASA Astrophysics Data System (ADS)

    Kusakabe, T.; Kame, N.

    2013-12-01

    An extended boundary integral equation method (XBIEM) has been recently proposed for the analysis of dynamic crack growth (=dynamic earthquake rupture model) in an inhomogeneous medium consisting of homogeneous sub-regions. Originally XBIEM is applicable to non-planar geometry of cracks and medium interfaces, but it has been demonstrated only for a simple planar crack along a bimaterial interface. Here we developed a code to analyse non-planar rupture with non-planar interfaces in a mode III problem, and applied it to a dynamic rupture problem across a planar bimaterial interface to investigate the effect of medium inhomogeneity. For this purpose, we firstly derived all the displacement and displacement velocity kernels in a unified analytic discretized form, in addition to the stress kernels already derived, necessary for versatile geometry of boundaries (i.e., cracks and interfaces) and checked all the kernel components in the simulation of wave propagation across a non-planar interface cutting a homogeneous medium. Then we validated our code in a wave reflection-transmission problem across a planar bimaterial interface. Secondly, in order to realize the analysis of dynamic rupture crossing a bimaterial interface we introduced a new implicit time-stepping scheme for instantaneously interacting boundary elements on the crack and medium interface. Such interactions only appear in the crack's crossing the interface. Otherwise we can use the explicit scheme as employed for BIEM in a homogeneous medium. We validated our numerical code for the crack growth in a homogeneous medium cut with a planar interface and found that our new scheme worked well. Finally, we tackled dynamic rupture propagation on a planar fault embedded normal to the planar interface of a bimaterial. Spontaneous rupture was allowed not only on the planar main fault but also on the interfacial fault and it is controlled by different slip-weakening laws on each of them: each peak strength is

  14. Dynamics of shock wave propagation and interphase process in liquid-vapor medium

    SciTech Connect

    Pokusaev, B.G.; Pribaturin, N.A.

    1995-09-01

    This paper considers the experimental results and physical effects on the pressure wave dynamics of a vapour-liquid two-phase medium of bubble and slug structure. The role of destruction and collapse of bubbles and slugs, phase transition (condensation and evaporation) on pressure wave dynamics is also studied. The general mechanisms of the wave formation, behavior and instability of a vapour-liquid structure under pressure waves, basic peculiarities of the interface heat transfer are obtained. In the experiments it has been shown that for the bubble medium the shock wave can be transformed into the powerful pressure pulse with an amplitude greater then the amplitude of the initial pressure wave. For the slug medium a characteristic structure of the amplificated wave is {open_quotes}comb{close_quotes} - like wave. It has been shown that the wave amplification caused by generation of secondary waves in a medium caused by destruction and collapse of bubbles and slugs. The obtained results can be useful at transient and emergency operational regimes of nuclear reactors, fuel tank, pipelines with two-phase flows and for development of safety models for chemical industry.

  15. Unusual spiral wave dynamics in the Kessler-Levine model of an excitable medium

    NASA Astrophysics Data System (ADS)

    Oikawa, N.; Bodenschatz, E.; Zykov, V. S.

    2015-05-01

    The Kessler-Levine model is a two-component reaction-diffusion system that describes spatiotemporal dynamics of the messenger molecules in a cell-to-cell signaling process during the aggregation of social amoeba cells. An excitation wave arising in the model has a phase wave at the wave back, which simply follows the wave front after a fixed time interval with the same propagation velocity. Generally speaking, the medium excitability and the refractoriness are two important factors which determine the spiral wave dynamics in any excitable media. The model allows us to separate these two factors relatively easily since the medium refractoriness can be changed independently of the medium excitability. For rigidly rotating waves, the universal relationship has been established by using a modified free-boundary approach, which assumes that the front and the back of a propagating wave are thin in comparison to the wave plateau. By taking a finite thickness of the domain boundary into consideration, the validity of the proposed excitability measure has been essentially improved. A novel method of numerical simulation to suppress the spiral wave instabilities is introduced. The trajectories of the spiral tip observed for a long refractory period have been investigated under a systematic variation of the medium refractoriness.

  16. Study of multiband disordered systems using the typical medium dynamical cluster approximation

    DOE PAGESBeta

    Zhang, Yi; Terletska, Hanna; Moore, C.; Ekuma, Chinedu; Tam, Ka-Ming; Berlijn, Tom; Ku, Wei; Moreno, Juana; Jarrell, Mark

    2015-11-06

    We generalize the typical medium dynamical cluster approximation to multiband disordered systems. Using our extended formalism, we perform a systematic study of the nonlocal correlation effects induced by disorder on the density of states and the mobility edge of the three-dimensional two-band Anderson model. We include interband and intraband hopping and an intraband disorder potential. Our results are consistent with those obtained by the transfer matrix and the kernel polynomial methods. We also apply the method to KxFe2-ySe2 with Fe vacancies. Despite the strong vacancy disorder and anisotropy, we find the material is not an Anderson insulator. Moreover our resultsmore » demonstrate the application of the typical medium dynamical cluster approximation method to study Anderson localization in real materials.« less

  17. Study of multiband disordered systems using the typical medium dynamical cluster approximation

    SciTech Connect

    Zhang, Yi; Terletska, Hanna; Moore, C.; Ekuma, Chinedu; Tam, Ka-Ming; Berlijn, Tom; Ku, Wei; Moreno, Juana; Jarrell, Mark

    2015-11-06

    We generalize the typical medium dynamical cluster approximation to multiband disordered systems. Using our extended formalism, we perform a systematic study of the nonlocal correlation effects induced by disorder on the density of states and the mobility edge of the three-dimensional two-band Anderson model. We include interband and intraband hopping and an intraband disorder potential. Our results are consistent with those obtained by the transfer matrix and the kernel polynomial methods. We also apply the method to KxFe2-ySe2 with Fe vacancies. Despite the strong vacancy disorder and anisotropy, we find the material is not an Anderson insulator. Moreover our results demonstrate the application of the typical medium dynamical cluster approximation method to study Anderson localization in real materials.

  18. Classical 2d dynamics simulations of metallic spheres in highly viscous medium

    NASA Astrophysics Data System (ADS)

    Fleck, Peter; Hubler, Alfred

    2007-03-01

    We study the classical dynamics computations of metallic spheres immersed in highly viscous, but weakly conducting medium while exposed to the electro-static field of external electrodes of varying geometries. We represent the system's charge dynamics by the spheres' multipole moments as induced by the electrodes. We theoretically derive the force contributions on an individual sphere including feedback effects, and compare these with results from finite-element computations. We find an individual sphere to oscillate between opposite electrodes only if sufficient charge is retained on the sphere on its path for given material parameters of the medium and distance between the electrodes. We discuss the system's parameter ranges necessary for line arrangements of multiple spheres to emerge. Finally, we compare our computations with an experiment of ballbearings in castor oil.

  19. Traveling waves and dynamical formation of autonomous pacemakers in a bistable medium with periodic boundary conditions

    NASA Astrophysics Data System (ADS)

    Shepelev, Igor A.; Vadivasova, Tatiana E.; Postnov, Dmitry E.

    2015-03-01

    The problem of spatiotemporal pattern formation in the wall of arterial vesselsmay be reduced to 1D or 2D models of nonlinear active medium. We address this problem using the discrete array of non-oscillating (bistable) active units. We show how the specific choice of initial conditions in a 1D model with periodic boundary conditions triggers the self-sustained behaviour. We reveal the core of observed effects being the dynamical formation of localized (few-element size) autonomous pacemakers.

  20. Extraction of near-surface properties for a lossy layered medium using the propagator matrix

    USGS Publications Warehouse

    Mehta, K.; Snieder, R.; Graizer, V.

    2007-01-01

    Near-surface properties play an important role in advancing earthquake hazard assessment. Other areas where near-surface properties are crucial include civil engineering and detection and delineation of potable groundwater. From an exploration point of view, near-surface properties are needed for wavefield separation and correcting for the local near-receiver structure. It has been shown that these properties can be estimated for a lossless homogeneous medium using the propagator matrix. To estimate the near-surface properties, we apply deconvolution to passive borehole recordings of waves excited by an earthquake. Deconvolution of these incoherent waveforms recorded by the sensors at different depths in the borehole with the recording at the surface results in waves that propagate upwards and downwards along the array. These waves, obtained by deconvolution, can be used to estimate the P- and S-wave velocities near the surface. As opposed to waves obtained by cross-correlation that represent filtered version of the sum of causal and acausal Green's function between the two receivers, the waves obtained by deconvolution represent the elements of the propagator matrix. Finally, we show analytically the extension of the propagator matrix analysis to a lossy layered medium for a special case of normal incidence. ?? 2007 The Authors Journal compilation ?? 2007 RAS.

  1. DYNAMICAL FRICTION IN A GASEOUS MEDIUM WITH A LARGE-SCALE MAGNETIC FIELD

    SciTech Connect

    Sanchez-Salcedo, F. J.

    2012-02-01

    The dynamical friction force experienced by a massive gravitating body moving through a gaseous medium is modified by sufficiently strong large-scale magnetic fields. Using linear perturbation theory, we calculate the structure of the wake generated by, and the gravitational drag force on, a body traveling in a straight-line trajectory in a uniformly magnetized medium. The functional form of the drag force as a function of the Mach number ({identical_to} V{sub 0}/c{sub s} , where V{sub 0} is the velocity of the body and c{sub s} is the sound speed) depends on the strength of the magnetic field and on the angle between the velocity of the perturber and the direction of the magnetic field. In particular, the peak value of the drag force is not near Mach number {approx}1 for a perturber moving in a sufficiently magnetized medium. As a rule of thumb, we may state that for supersonic motion, magnetic fields act to suppress dynamical friction; for subsonic motion, they tend to enhance dynamical friction. For perturbers moving along the magnetic field lines, the drag force at some subsonic Mach numbers may be stronger than at supersonic velocities. We also mention the relevance of our findings to black hole coalescence in galactic nuclei.

  2. Bioinspired, dynamic, structured surfaces for biofilm prevention

    NASA Astrophysics Data System (ADS)

    Epstein, Alexander K.

    Bacteria primarily exist in robust, surface-associated communities known as biofilms, ubiquitous in both natural and anthropogenic environments. Mature biofilms resist a wide range of biocidal treatments and pose persistent pathogenic threats. Treatment of adherent biofilm is difficult, costly, and, in medical systems such as catheters, frequently impossible. Adding to the challenge, we have discovered that biofilm can be both impenetrable to vapors and extremely nonwetting, repelling even low surface tension commercial antimicrobials. Our study shows multiple contributing factors, including biochemical components and multiscale reentrant topography. Reliant on surface chemistry, conventional strategies for preventing biofilm only transiently affect attachment and/or are environmentally toxic. In this work, we look to Nature's antifouling solutions, such as the dynamic spiny skin of the echinoderm, and we develop a versatile surface nanofabrication platform. Our benchtop approach unites soft lithography, electrodeposition, mold deformation, and material selection to enable many degrees of freedom—material, geometric, mechanical, dynamic—that can be programmed starting from a single master structure. The mechanical properties of the bio-inspired nanostructures, verified by AFM, are precisely and rationally tunable. We examine how synthetic dynamic nanostructured surfaces control the attachment of pathogenic biofilms. The parameters governing long-range patterning of bacteria on high-aspect-ratio (HAR) nanoarrays are combinatorially elucidated, and we discover that sufficiently low effective stiffness of these HAR arrays mechanoselectively inhibits ˜40% of Pseudomonas aeruginosa biofilm attachment. Inspired by the active echinoderm skin, we design and fabricate externally actuated dynamic elastomer surfaces with active surface microtopography. We extract from a large parameter space the critical topographic length scales and actuation time scales for achieving

  3. Medium optimization for the production of recombinant nattokinase by Bacillus subtilis using response surface methodology.

    PubMed

    Chen, Po Ting; Chiang, Chung-Jen; Chao, Yun-Peng

    2007-01-01

    Nattokinase is a potent fibrinolytic enzyme with the potential for fighting cardiovascular diseases. Most recently, a new Bacillus subtilis/Escherichia coli (B. subtilis/E. coli) shuttle vector has been developed to achieve stable production of recombinant nattokinase in B. subtilis (Chen; et al. 2007, 23, 808-813). With this developed B. subtilis strain, the design of an optimum but cost-effective medium for high-level production of recombinant nattokinase was attempted by using response surface methodology. On the basis of the Plackett-Burman design, three critical medium components were selected. Subsequently, the optimum combination of selected factors was investigated by the Box-Behnken design. As a result, it gave the predicted maximum production of recombinant nattokinase with 71 500 CU/mL for shake-flask cultures when the concentrations of soybean hydrolysate, potassium phosphate, and calcium chloride in medium were at 6.100, 0.415, and 0.015%, respectively. This was further verified by a duplicated experiment. Moreover, the production scheme based on the optimum medium was scaled up in a fermenter. The batch fermentation of 3 L was carried out by controlling the condition at 37 degrees C and dissolved oxygen reaching 20% of air saturation level while the fermentation pH was initially set at 8.5. Without the need for controlling the broth pH, recombinant nattokinase production with a yield of 77 400 CU/mL (corresponding to 560 mg/L) could be obtained in the culture broth within 24 h. In particular, the recombinant B. subtilis strain was found fully stable at the end of fermentation when grown on the optimum medium. Overall, it indicates the success of this experimental design approach in formulating a simple and cost-effective medium, which provides the developed strain with sufficient nutrient supplements for stable and high-level production of recombinant nattokinase in a fermenter. PMID:17914859

  4. Dynamic contact angle cycling homogenizes heterogeneous surfaces.

    PubMed

    Belibel, R; Barbaud, C; Mora, L

    2016-12-01

    In order to reduce restenosis, the necessity to develop the appropriate coating material of metallic stent is a challenge for biomedicine and scientific research over the past decade. Therefore, biodegradable copolymers of poly((R,S)-3,3 dimethylmalic acid) (PDMMLA) were prepared in order to develop a new coating exhibiting different custom groups in its side chain and being able to carry a drug. This material will be in direct contact with cells and blood. It consists of carboxylic acid and hexylic groups used for hydrophilic and hydrophobic character, respectively. The study of this material wettability and dynamic surface properties is of importance due to the influence of the chemistry and the potential motility of these chemical groups on cell adhesion and polymer kinetic hydrolysis. Cassie theory was used for the theoretical correction of contact angles of these chemical heterogeneous surfaces coatings. Dynamic Surface Analysis was used as practical homogenizer of chemical heterogeneous surfaces by cycling during many cycles in water. In this work, we confirmed that, unlike receding contact angle, advancing contact angle is influenced by the difference of only 10% of acidic groups (%A) in side-chain of polymers. It linearly decreases with increasing acidity percentage. Hysteresis (H) is also a sensitive parameter which is discussed in this paper. Finally, we conclude that cycling provides real information, thus avoiding theoretical Cassie correction. H(10)is the most sensible parameter to %A. PMID:27612817

  5. Dynamic bioactive stimuli-responsive polymeric surfaces

    NASA Astrophysics Data System (ADS)

    Pearson, Heather Marie

    This dissertation focuses on the design, synthesis, and development of antimicrobial and anticoagulant surfaces of polyethylene (PE), polypropylene (PP), and poly(tetrafluoroethylene) (PTFE) polymers. Aliphatic polymeric surfaces of PE and PP polymers functionalized using click chemistry reactions by the attachment of --COOH groups via microwave plasma reactions followed by functionalization with alkyne moieties. Azide containing ampicillin (AMP) was synthesized and subsequently clicked into the alkyne prepared PE and PP surfaces. Compared to non-functionalized PP and PE surfaces, the AMP clicked surfaces exhibited substantially enhanced antimicrobial activity against Staphylococcus aureus bacteria. To expand the biocompatibility of polymeric surface anticoagulant attributes, PE and PTFE surfaces were functionalized with pH-responsive poly(2-vinyl pyridine) (P2VP) and poly(acrylic acid) (PAA) polyelectrolyte tethers terminated with NH2 and COOH groups. The goal of these studies was to develop switchable stimuli-responsive polymeric surfaces that interact with biological environments and display simultaneous antimicrobial and anticoagulant properties. Antimicrobial AMP was covalently attached to --COOH terminal ends of protected PAA, while anticoagulant heparin (HEP) was attached to terminal --NH2 groups of P2VP. When pH < 2.3, the P2VP segments are protonated and extend, but for pH > 5.5, they collapse while the PAA segments extend. Such surfaces, when exposed to Staphylococcus aureus, inhibit bacterial growth due to the presence of AMP, as well as are effective anticoagulants due to the presence of covalently attached HEP. Comparison of these "dynamic" pH responsive surfaces with "static" surfaces terminated with AMP entities show significant enhancement of longevity and surface activity against microbial film formation. The last portion of this dissertation focuses on the covalent attachment of living T1 and Φ11 bacteriophages (phages) on PE and PTFE surface

  6. Optimization of a natural medium for cellulase by a marine Aspergillus niger using response surface methodology.

    PubMed

    Xue, Dong-Sheng; Chen, Hui-Yin; Lin, Dong-Qiang; Guan, Yi-Xin; Yao, Shan-Jing

    2012-08-01

    The components of a natural medium were optimized to produce cellulase from a marine Aspergillus niger under solid state fermentation conditions by response surface methodology. Eichhornia crassipes and natural seawater were used as a major substrate and a source of mineral salts, respectively. Mineral salts of natural seawater could increase cellulase production. Raw corn cob and raw rice straw showed a significant positive effect on cellulase production. The optimum natural medium consisted of 76.9 % E. crassipes (w/w), 8.9 % raw corn cob (w/w), 3.5 % raw rice straw (w/w), 10.7 % raw wheat bran (w/w), and natural seawater (2.33 times the weight of the dry substrates). Incubation for 96 h in the natural medium increased the biomass to the maximum. The cellulase production was 17.80 U/g the dry weight of substrates after incubation for 144 h. The natural medium avoided supplying chemicals and pretreating substrates. It is promising for future practical fermentation of environment-friendly producing cellulase. PMID:22644643

  7. Dynamical surface affinity of diphasic liquids as a probe of wettability of multimodal porous media.

    PubMed

    Korb, J-P; Freiman, G; Nicot, B; Ligneul, P

    2009-12-01

    We introduce a method for estimating the wettability of rock/oil/brine systems using noninvasive in situ nuclear magnetic relaxation dispersion. This technique scans over a large range of applied magnetic fields and yields unique information about the extent to which a fluid is dynamically correlated with a solid rock surface. Unlike conventional transverse relaxation studies, this approach is a direct probe of the dynamical surface affinity of fluids. To quantify these features we introduce a microscopic dynamical surface affinity index which measures the dynamical correlation (i.e., the microscopic wettability) between the diffusive fluid and the fixed paramagnetic relaxation sources at the pore surfaces. We apply this method to carbonate reservoir rocks which are known to hold about two thirds of the world's oil reserves. Although this nondestructive method concerns here an application to rocks, it could be generalized as an in situ liquid/surface affinity indicator for any multimodal porous medium including porous biological media. PMID:20365175

  8. Monitoring vegetation dynamics with medium resolution MODIS-EVI time series at sub-regional scale in southern Africa

    NASA Astrophysics Data System (ADS)

    Dubovyk, Olena; Landmann, Tobias; Erasmus, Barend F. N.; Tewes, Andreas; Schellberg, Jürgen

    2015-06-01

    Currently there is a lack of knowledge on spatio-temporal patterns of land surface dynamics at medium spatial scale in southern Africa, even though this information is essential for better understanding of ecosystem response to climatic variability and human-induced land transformations. In this study, we analysed vegetation dynamics across a large area in southern Africa using the 14-years (2000-2013) of medium spatial resolution (250 m) MODIS-EVI time-series data. Specifically, we investigated temporal changes in the time series of key phenometrics including overall greenness, peak and timing of annual greenness over the monitoring period and study region. In order to specifically capture spatial and per pixel vegetation changes over time, we calculated trends in these phenometrics using a robust trend analysis method. The results showed that interannual vegetation dynamics followed precipitation patterns with clearly differentiated seasonality. The earliest peak greenness during 2000-2013 occurred at the end of January in the year 2000 and the latest peak greenness was observed at the mid of March in 2012. Specifically spatial patterns of long-term vegetation trends allowed mapping areas of (i) decrease or increase in overall greenness, (ii) decrease or increase of peak greenness, and (iii) shifts in timing of occurrence of peak greenness over the 14-year monitoring period. The observed vegetation decline in the study area was mainly attributed to human-induced factors. The obtained information is useful to guide selection of field sites for detailed vegetation studies and land rehabilitation interventions and serve as an input for a range of land surface models.

  9. Optical tracking of contrast medium bolus to optimize bolus shape and timing in dynamic computed tomography

    NASA Astrophysics Data System (ADS)

    Eisa, Fabian; Brauweiler, Robert; Peetz, Alexander; Hupfer, Martin; Nowak, Tristan; Kalender, Willi A.

    2012-05-01

    One of the biggest challenges in dynamic contrast-enhanced CT is the optimal synchronization of scan start and duration with contrast medium administration in order to optimize image contrast and to reduce the amount of contrast medium. We present a new optically based approach, which was developed to investigate and optimize bolus timing and shape. The time-concentration curve of an intravenously injected test bolus of a dye is measured in peripheral vessels with an optical sensor prior to the diagnostic CT scan. The curves can be used to assess bolus shapes as a function of injection protocols and to determine contrast medium arrival times. Preliminary results for phantom and animal experiments showed the expected linear behavior between dye concentration and absorption. The kinetics of the dye was compared to iodinated contrast medium and was found to be in good agreement. The contrast enhancement curves were reliably detected in three mice with individual bolus shapes and delay times of 2.1, 3.5 and 6.1 s, respectively. The optical sensor appears to be a promising approach to optimize injection protocols and contrast enhancement timing and is applicable to all modalities without implying any additional radiation dose. Clinical tests are still necessary.

  10. On the Dynamical and Physical State of the ``Diffuse Ionized Medium'' in Nearby Spiral Galaxies

    NASA Astrophysics Data System (ADS)

    Wang, Jing; Heckman, Timothy M.; Lehnert, Matthew D.

    1997-12-01

    We report the initial results from a program to study the morphology, physical state, and kinematics of the ``diffuse ionized medium'' (DIM) in a sample of the nearest and brightest late-type galaxies. For each of five galaxies (NGC 2403, M81, NGC 4395, M51, and M101), we have analyzed deep narrowband Hα images of the entire star-forming disk and long-slit spectra of the inner (~10 kpc) disk with a resolution of 40-75 km s-1. We find that the DIM covers most of the star-forming disk and is morphologically related to the presence of high surface brightness gas (the giant H II regions). The DIM and the giant H II regions differ systematically in their physical and dynamical state. The DIM is characterized by enhanced emission in the low-ionization forbidden lines ([O I], [N II], and [S II]), and even the high-ionization [O III] λ5007 line is moderately strong in the DIM in at least three cases. This last result contrasts with upper limits on the [O III] surface brightness in the local DIM of our own Galaxy (the ``Reynolds Layer''). We directly verify the inference made by Lehnert and Heckman that the DIM contributes significantly to the spatially integrated (global) emission-line ratios measured in late-type galaxies. We also find that the DIM is more disturbed kinematically than the gas in the giant H II regions. The deconvolved (intrinsic) widths of the Hα and [N II] λ6584 lines range from 30 to 100 km s-1 (FWHM) in the DIM compared to 20-50 km s-1 in the giant H II regions. The high-ionization gas in the DIM is more kinematically disturbed than the low-ionization gas: the [O III] λ5007 lines have intrinsic widths of 70-150 km s-1. The differing kinematics implies that the DIM is not a single monolithic phase of the ISM. Instead, it may consist of a ``quiescent'' DIM with a low ionization state and small scale height (few hundred parsec) and a ``disturbed'' DIM with a high ionization state and moderate scale height (0.5-1 kpc). We argue that the quiescent DIM

  11. Dynamic Maintenance and Visualization of Molecular Surfaces

    SciTech Connect

    Bajaj, C L; Pascucci, V; Shamir, A; Holt, R J; Netravali, A N

    2004-12-16

    Molecular surface computations are often necessary in order to perform synthetic drug design. A critical step in this process is the computation and update of an exact boundary representation for the molecular surface (e.g. the Lee-Richards surface). In this paper they introduce efficient techniques for computing a molecular surface boundary representation as a set of NURBS (non-uniform rational B-splines) patches. This representation introduces for molecules the same geometric data structure used in the solid modeling community and enables immediate access to a wide range of modeling operations and techniques. Furthermore, this allows the use of any general solid modeling or visualization system as a molecular modeling interface. However, using such a representation in a molecular modeling environment raises several efficiency and update constraints, especially in a dynamic setting. For example, changes in the probe radius result in both geometric and topological changes to the set of patches. The techniques provide the option of trading accuracy of the representation for the efficiency of the computation, while still tracking the changes in the set of patches. In particular, they discuss two main classes of dynamic updates: one that keeps the topology of the molecular configuration fixed, and a more complicated case where the topology may be updated continuously. In general the generated output surface is represented in a format that can be loaded into standard solid modeling systems. It can also be directly triangulated or rendered, possibly at different levels of resolution, by a standard graphics library such as OpenGL without any additional effort.

  12. Influence of Kerr-like medium on the dynamics of a two-mode Raman coupled model

    NASA Astrophysics Data System (ADS)

    Singh, Sudha; Gilhare, Karuna

    2016-08-01

    We study the quantum dynamics of an effective two-level atom interacting with two modes via Raman process inside an ideal cavity in the presence of Kerr non-linearity. The cavity modes interact both with the atom as well as the Kerr-like medium. The unitary transformation method presented here, not only solves the time-dependent problem, but also provides the eigensolutions of the interacting Hamiltonian at the same time. We study the atomic-population dynamics and the dynamics of the photon statistics in the two cavity modes. The influence of the Kerr-like medium on the statistics of the field is explored and it is observed that Kerr medium introduces antibunching in mode 1 and this effect is enhanced by a stronger interaction with the non-linear medium. In the high non-linear coupling regime anticorrelated beam become correlated. Kerr medium also introduces non-classical correlation between the two modes.

  13. Envelope Synthesis on the Free Surface of a Random Elastic Medium Based on the Markov Approximation

    NASA Astrophysics Data System (ADS)

    Emoto, K.; Sato, H.; Nishimura, T.

    2008-12-01

    Short-period seismograms mostly consist of the waves scattered by random inhomogeneities of the solid earth. For P-waves, the apparent duration is broadened and the transverse amplitude is excited with travel distance increasing. Usually, we observe the seismic waves on the free surface. For the homogeneous medium case, the vertical incident P-wave amplitude is doubled at the free surface; however, for the inhomogeneous medium case it has not been clear how the free surface affects wave amplitudes since the ray directions are widely distributed because of scattering. Here, we develop the synthesis of vector-wave envelopes on the free surface of a random medium. When the wave length is shorter than the correlation distance of 3-D infinite random media, characterized by a Gaussian autocorrelation function, Sato (2006) derives analytical solutions of vector-wave envelopes on the basis of the Markov approximation, which is a stochastic extension of the split stem method to solve the parabolic wave equation. We extend his method for the synthesis of vector-wave envelopes on the free surface of a random medium. In the Markov approximation, Mean square (MS) envelopes are calculated by using the Fourier transform of two-frequency mutual coherence function (TFMCF) with respect to the angular frequency. The TFMCF is statistically defined on the transverse plane, which is perpendicular to the global ray direction. The Fourier transform of the TFMCF with respect to the transverse coordinates gives the angular spectrum that shows the distribution of ray directions. This angular spectrum has a sharp peak in the global ray direction just after the direct wave arrival and gradually increases its width with the lapse time increasing. We can calculate vector-wave envelopes in the infinite space, simply projecting the angular spectrum to each component and integrating it in the wavenumber space. We calculate the vector-wave envelopes on the free surface by multiplying the

  14. The Surface Wave Dynamics Experiment (SWADE)

    NASA Technical Reports Server (NTRS)

    Mollo-Christensen, Erik; Oberholtzer, J. David

    1991-01-01

    The Surface Wave Dynamics Experiment is designed to provide the basic data needed to understand the wind-wave interactions in the open ocean. During the period of October 1990 through March 1991 two discus, four meteorological buoys, and several other specialized buoys will collect continuous in-situ data. During three intensive periods of study, several aircraft and an airship will collect synoptic data from the study area in the Atlantic east of the Wallops Flight Facility. Data from the buoys will be collected by aircraft and ARGOS data links. Instrumentation descriptions as well as preliminary data from the first intensive study period are presented.

  15. Nonlinear Dynamics of Biofilm Growth on Sediment Surfaces

    NASA Astrophysics Data System (ADS)

    Molz, F. J.; Murdoch, L. C.; Faybishenko, B.

    2013-12-01

    Bioclogging often begins with the establishment of small colonies (microcolonies), which then form biofilms on the surfaces of a porous medium. These biofilm-porous media surfaces are not simple coatings of single microbes, but complex assemblages of cooperative and competing microbes, interacting with their chemical environment. This leads one to ask: what are the underlying dynamics involved with biofilm growth? To begin answering this question, we have extended the work of Kot et al. (1992, Bull. Mathematical Bio.) from a fully mixed chemostat to an idealized, one-dimensional, biofilm environment, taking into account a simple predator-prey microbial competition, with the prey feeding on a specified food source. With a variable (periodic) food source, Kot et al. (1992) were able to demonstrate chaotic dynamics in the coupled substrate-prey-predator system. Initially, deterministic chaos was thought by many to be mainly a mathematical phenomenon. However, several recent publications (e.g., Becks et al, 2005, Nature Letters; Graham et al. 2007, Int. Soc Microb. Eco. J.; Beninca et al., 2008, Nature Letters; Saleh, 2011, IJBAS) have brought together, using experimental studies and relevant mathematics, a breakthrough discovery that deterministic chaos is present in relatively simple biochemical systems. Two of us (Faybishenko and Molz, 2013, Procedia Environ. Sci)) have numerically analyzed a mathematical model of rhizosphere dynamics (Kravchenko et al., 2004, Microbiology) and detected patterns of nonlinear dynamical interactions supporting evidence of synchronized synergetic oscillations of microbial populations, carbon and oxygen concentrations driven by root exudation into a fully mixed system. In this study, we have extended the application of the Kot et al. model to investigate a spatially-dependent biofilm system. We will present the results of numerical simulations obtained using COMSOL Multi-Physics software, which we used to determine the nature of the

  16. Surface response of a viscoelastic medium to subsurface acoustic sources with application to medical diagnosis

    NASA Astrophysics Data System (ADS)

    Royston, Thomas J.; Yazicioglu, Yigit; Loth, Francis

    2003-02-01

    The response at the surface of an isotropic viscoelastic medium to buried fundamental acoustic sources is studied theoretically, computationally and experimentally. Finite and infinitesimal monopole and dipole sources within the low audible frequency range (40-400 Hz) are considered. Analytical and numerical integral solutions that account for compression, shear and surface wave response to the buried sources are formulated and compared with numerical finite element simulations and experimental studies on finite dimension phantom models. It is found that at low audible frequencies, compression and shear wave propagation from point sources can both be significant, with shear wave effects becoming less significant as frequency increases. Additionally, it is shown that simple closed-form analytical approximations based on an infinite medium model agree well with numerically obtained ``exact'' half-space solutions for the frequency range and material of interest in this study. The focus here is on developing a better understanding of how biological soft tissue affects the transmission of vibro-acoustic energy from biological acoustic sources below the skin surface, whose typical spectral content is in the low audible frequency range. Examples include sound radiated from pulmonary, gastro-intestinal and cardiovascular system functions, such as breath sounds, bowel sounds and vascular bruits, respectively.

  17. Evaluation of a numerical simulation model for a system coupling atmospheric gas, surface water and unsaturated or saturated porous medium.

    PubMed

    Hibi, Yoshihiko; Tomigashi, Akira; Hirose, Masafumi

    2015-12-01

    Numerical simulations that couple flow in a surface fluid with that in a porous medium are useful for examining problems of pollution that involve interactions among the atmosphere, surface water and groundwater, including, for example, saltwater intrusion along coasts. We previously developed a numerical simulation method for simulating a coupled atmospheric gas, surface water, and groundwater system (called the ASG method) that employs a saturation equation for flow in a porous medium; this equation allows both the void fraction of water in the surface system and water saturation in the porous medium to be solved simultaneously. It remained necessary, however, to evaluate how global pressure, including gas pressure, water pressure, and capillary pressure, should be specified at the boundary between the surface and the porous medium. Therefore, in this study, we derived a new equation for global pressure and integrated it into the ASG method. We then simulated water saturation in a porous medium and the void fraction of water in a surface system by the ASG method and reproduced fairly well the results of two column experiments. Next, we simulated water saturation in a porous medium (sand) with a bank, by using both the ASG method and a modified Picard (MP) method. We found only a slight difference in water saturation between the ASG and MP simulations. This result confirmed that the derived equation for global pressure was valid for a porous medium, and that the global pressure value could thus be used with the saturation equation for porous media. Finally, we used the ASG method to simulate a system coupling atmosphere, surface water, and a porous medium (110m wide and 50m high) with a trapezoidal bank. The ASG method was able to simulate the complex flow of fluids in this system and the interaction between the porous medium and the surface water or the atmosphere. PMID:26583741

  18. Evaluation of a numerical simulation model for a system coupling atmospheric gas, surface water and unsaturated or saturated porous medium

    NASA Astrophysics Data System (ADS)

    Hibi, Yoshihiko; Tomigashi, Akira; Hirose, Masafumi

    2015-12-01

    Numerical simulations that couple flow in a surface fluid with that in a porous medium are useful for examining problems of pollution that involve interactions among the atmosphere, surface water and groundwater, including, for example, saltwater intrusion along coasts. We previously developed a numerical simulation method for simulating a coupled atmospheric gas, surface water, and groundwater system (called the ASG method) that employs a saturation equation for flow in a porous medium; this equation allows both the void fraction of water in the surface system and water saturation in the porous medium to be solved simultaneously. It remained necessary, however, to evaluate how global pressure, including gas pressure, water pressure, and capillary pressure, should be specified at the boundary between the surface and the porous medium. Therefore, in this study, we derived a new equation for global pressure and integrated it into the ASG method. We then simulated water saturation in a porous medium and the void fraction of water in a surface system by the ASG method and reproduced fairly well the results of two column experiments. Next, we simulated water saturation in a porous medium (sand) with a bank, by using both the ASG method and a modified Picard (MP) method. We found only a slight difference in water saturation between the ASG and MP simulations. This result confirmed that the derived equation for global pressure was valid for a porous medium, and that the global pressure value could thus be used with the saturation equation for porous media. Finally, we used the ASG method to simulate a system coupling atmosphere, surface water, and a porous medium (110 m wide and 50 m high) with a trapezoidal bank. The ASG method was able to simulate the complex flow of fluids in this system and the interaction between the porous medium and the surface water or the atmosphere.

  19. Observing Global Surface Water Flood Dynamics

    NASA Astrophysics Data System (ADS)

    Bates, Paul D.; Neal, Jefferey C.; Alsdorf, Douglas; Schumann, Guy J.-P.

    2014-05-01

    Flood waves moving along river systems are both a key determinant of globally important biogeochemical and ecological processes and, at particular times and particular places, a major environmental hazard. In developed countries, sophisticated observing networks and ancillary data, such as channel bathymetry and floodplain terrain, exist with which to understand and model floods. However, at global scales, satellite data currently provide the only means of undertaking such studies. At present, there is no satellite mission dedicated to observing surface water dynamics and, therefore, surface water scientists make use of a range of sensors developed for other purposes that are distinctly sub-optimal for the task in hand. Nevertheless, by careful combination of the data available from topographic mapping, oceanographic, cryospheric and geodetic satellites, progress in understanding some of the world's major river, floodplain and wetland systems can be made. This paper reviews the surface water data sets available to hydrologists on a global scale and the recent progress made in the field. Further, the paper looks forward to the proposed NASA/CNES Surface Water Ocean Topography satellite mission that may for the first time provide an instrument that meets the needs of the hydrology community.

  20. Molecular dynamics simulations of soliton-like structures in a dusty plasma medium

    SciTech Connect

    Tiwari, Sanat Kumar Das, Amita; Sen, Abhijit; Kaw, Predhiman

    2015-03-15

    The existence and evolution of soliton-like structures in a dusty plasma medium are investigated in a first principles approach using molecular dynamic (MD) simulations of particles interacting via a Yukawa potential. These localized structures are found to exist in both weakly and strongly coupled regimes with their structures becoming sharper as the correlation effects between the dust particles get stronger. A surprising result, compared to fluid simulations, is the existence of rarefactive soliton-like structures in our non-dissipative system, a feature that arises from the charge conjugation symmetry property of the Yukawa fluid. Our simulation findings closely resemble many diverse experimental results reported in the past.

  1. Medium optimization by combination of response surface methodology and desirability function: an application in glutamine production.

    PubMed

    Li, Jinshan; Ma, Cuiqing; Ma, Yanhe; Li, Yan; Zhou, Wei; Xu, Ping

    2007-03-01

    An optimization strategy based on desirability function approach (DFA) together with response surface methodology (RSM) has been used to optimize production medium in L-glutamine fermentation. Fermentation problems often force to reach a compromise between different experimental variables in order to achieve the most suitable strategy applying in industrial production. The importance of the use of multi-objective optimization methods lies in the ability to cope with this kind of problems. A sequential RSM with different combinations of glucose and (NH(4))(2)SO(4) was performed to attain the optimal medium (OM-1) in glutamine production. Based on the result of RSM and the evaluation of production cost, a more economical optimal medium (OM-2) was obtained with the aid of DFA. In DFA study, glutamate, the main by-product in glutamine fermentation as another response was considered. Compared with OM-1 in validated experiment, similar amounts of glutamine were obtained in OM-2 while the concentration of glutamate and the production cost decreased by 53.6 and 7.1%, respectively. PMID:17119957

  2. Optimization of Medium Using Response Surface Methodology for Lipid Production by Scenedesmus sp.

    PubMed Central

    Yang, Fangfang; Long, Lijuan; Sun, Xiumei; Wu, Hualian; Li, Tao; Xiang, Wenzhou

    2014-01-01

    Lipid production is an important indicator for assessing microalgal species for biodiesel production. In this work, the effects of medium composition on lipid production by Scenedesmus sp. were investigated using the response surface methodology. The results of a Plackett–Burman design experiment revealed that NaHCO3, NaH2PO4·2H2O and NaNO3 were three factors significantly influencing lipid production, which were further optimized by a Box–Behnken design. The optimal medium was found to contain 3.07 g L−1 NaHCO3, 15.49 mg L−1 NaH2PO4·2H2O and 803.21 mg L−1 NaNO3. Using the optimal conditions previously determined, the lipid production (304.02 mg·L−1) increased 54.64% more than that using the initial medium, which agreed well with the predicted value 309.50 mg L−1. Additionally, lipid analysis found that palmitic acid (C16:0) and oleic acid (C18:1) dominantly constituted the algal fatty acids (about 60% of the total fatty acids) and a much higher content of neutral lipid accounted for 82.32% of total lipids, which strongly proved that Scenedesmus sp. is a very promising feedstock for biodiesel production. PMID:24663113

  3. Aquatic flower-inspired cell culture platform with simplified medium exchange process for facilitating cell-surface interaction studies.

    PubMed

    Hong, Hyeonjun; Park, Sung Jea; Han, Seon Jin; Lim, Jiwon; Kim, Dong Sung

    2016-02-01

    Establishing fundamentals for regulating cell behavior with engineered physical environments, such as topography and stiffness, requires a large number of cell culture experiments. However, cell culture experiments in cell-surface interaction studies are generally labor-intensive and time-consuming due to many experimental tasks, such as multiple fabrication processes in sample preparation and repetitive medium exchange in cell culture. In this work, a novel aquatic flower-inspired cell culture platform (AFIP) is presented. AFIP aims to facilitate the experiments on the cell-surface interaction studies, especially the medium exchange process. AFIP was devised to capture and dispense cell culture medium based on interactions between an elastic polymer substrate and a liquid medium. Thus, the medium exchange can be performed easily and without the need of other instruments, such as a vacuum suction and pipette. An appropriate design window of AFIP, based on scaling analysis, was identified to provide a criterion for achieving stability in medium exchange as well as various surface characteristics of the petal substrates. The developed AFIP, with physically engineered petal substrates, was also verified to exchange medium reliably and repeatedly. A closed structure capturing the medium was sustained stably during cell culture experiments. NIH3T3 proliferation results also demonstrated that AFIP can be applied to the cell-surface interaction studies as an alternative to the conventional method. PMID:26683462

  4. Experimental Studies of Dynamics at Solid Surfaces

    NASA Astrophysics Data System (ADS)

    Germer, Thomas Avery

    1992-01-01

    Measurements of thermal and photoinduced processes on metal surfaces point to the importance of transient intermediate species in the understanding of dynamics. Experiments were performed using photoinduced desorption (PID), thermal desorption spectroscopy (TDS), high-resolution and time -resolved electron-energy-loss spectroscopy (HREELS and TREELS), and femtosecond multiphoton photoemission spectroscopy. The thermal and photoinduced reactions of Mo(CO)_6 adsorbed on Rh(100) were studied to better understand energy transfer between a photoexcited molecule and a metal surface. The Mo(CO)_6 partially dissociated upon adsorption, allowing a comparison to be made between Mo(CO)_6 adsorbed on the fragment-covered surface and a more ordered CO-covered surface. The energy transfer rate was found to be larger on the fragment-covered surface. The thermal reaction of hydrogen gas with oxygen adsorbed on Pt(111) was studied with TREELS between 130 and 160 K, observing the modes associated with hydroxyl adsorbed on the surface as a function of time while the sample, preadsorbed with atomic oxygen, was exposed to hydrogen gas. In coordination between Monte Carlo calculations and kinetic simulations, a model was developed whereby the reaction to form hydroxyl occurred between a molecular hydrogen precursor and oxygen at island boundaries. The photoinduced reaction of adsorbed atomic hydrogen and molecular oxygen to form hydroxyl and water on Pt(111) was studied in order to understand the reactivity of the hot oxygen atoms produced by photodissociation of molecular oxygen. The final products of the two oxygen -hydrogen reactions were the same. A measurement was made of the cross section for NO photodesorption from Pt(111) at 90 K. All of these experiments pointed to a need to make transient measurements on the ultrashort time scale in order to develop a more microscopic understanding of the dynamical processes that are occurring. As a result, a novel time-of-flight analyzer was

  5. Dynamic wormholes, antitrapped surfaces, and energy conditions

    SciTech Connect

    Hochberg, D.; Visser, M.

    1998-08-01

    It is by now apparent that topology is too crude a tool to accurately characterize a generic traversable wormhole. In two earlier papers we developed a complete characterization of generic but static traversable wormholes, and in the present paper extend the discussion to arbitrary time-dependent (dynamical) wormholes. A local definition of a wormhole throat, free from assumptions about asymptotic flatness, symmetries, future and past null infinities, embedding diagrams, topology, and even time dependence is developed that accurately captures the essence of what a wormhole throat is, and where it is located. Adapting and extending a suggestion due to Page, we define a wormhole throat to be a marginally anti-trapped surface, that is, a closed two-dimensional spatial hypersurface such that one of the two future-directed null geodesic congruences orthogonal to it is just beginning to diverge. Typically a dynamic wormhole will possess {ital two} such throats, corresponding to the two orthogonal null geodesic congruences, and these two throats will not coincide (though they do coalesce into a single throat in the static limit). The divergence property of the null geodesics at the marginally anti-trapped surface generalizes the {open_quotes}flare-out{close_quotes} condition for an arbitrary wormhole. We derive theorems regarding violations of the null energy condition (NEC) at and near these throats and find that, even for wormholes with arbitrary time dependence, the violation of the NEC is a generic property of wormhole throats. We also discuss wormhole throats in the presence of fully antisymmetric torsion and find that the energy condition violations {ital cannot} be dumped into the torsion degrees of freedom. Finally by means of a concrete example we demonstrate that even temporary suspension of energy-condition violations is incompatible with the flare-out property of dynamic throats. {copyright} {ital 1998} {ital The American Physical Society}

  6. Response surface optimization of culture medium for enhanced docosahexaenoic acid production by a Malaysian thraustochytrid

    PubMed Central

    Manikan, Vidyah; Kalil, Mohd Sahaid; Hamid, Aidil Abdul

    2015-01-01

    Docosahexaenoic acid (DHA, C22:6n-3) plays a vital role in the enhancement of human health, particularly for cognitive, neurological, and visual functions. Marine microalgae, such as members of the genus Aurantiochytrium, are rich in DHA and represent a promising source of omega-3 fatty acids. In this study, levels of glucose, yeast extract, sodium glutamate and sea salt were optimized for enhanced lipid and DHA production by a Malaysian isolate of thraustochytrid, Aurantiochytrium sp. SW1, using response surface methodology (RSM). The optimized medium contained 60 g/L glucose, 2 g/L yeast extract, 24 g/L sodium glutamate and 6 g/L sea salt. This combination produced 17.8 g/L biomass containing 53.9% lipid (9.6 g/L) which contained 44.07% DHA (4.23 g/L). The optimized medium was used in a scale-up run, where a 5 L bench-top bioreactor was employed to verify the applicability of the medium at larger scale. This produced 24.46 g/L biomass containing 38.43% lipid (9.4 g/L), of which 47.87% was DHA (4.5 g/L). The total amount of DHA produced was 25% higher than that produced in the original medium prior to optimization. This result suggests that Aurantiochytrium sp. SW1 could be developed for industrial application as a commercial DHA-producing microorganism. PMID:25721623

  7. A dynamic synchrotron X-ray imaging study of effective temperature in a vibrated granular medium.

    PubMed

    Cao, Yixin; Zhang, Xiaodan; Kou, Binquan; Li, Xiangting; Xiao, Xianghui; Fezzaa, Kamel; Wang, Yujie

    2014-08-01

    We present a dynamic synchrotron X-ray imaging study of the effective temperature Teff in a vibrated granular medium. By tracking the directed motion and the fluctuation dynamics of the tracers inside, we obtained Teff of the system using the Einstein relationship. We found that as the system unjams with increasing vibration intensities Γ, the structural relaxation time τ increases substantially which can be fitted by an Arrhenius law using Teff. And the characteristic energy scale of structural relaxation yielded by the Arrhenius fitting is E = 0.20 ± 0.02pd(3), where p is the pressure and d is the background particle diameter, which is consistent with those from hard sphere simulations in which the structural relaxation happens via the opening up of free volume against pressure. PMID:24930865

  8. Study of the Surface Heterogeneity of icy dwarf?planets and other medium size Kuiper Belt objects

    NASA Astrophysics Data System (ADS)

    Pinilla-Alonso, Noemi; Emery, Josh P.

    2015-10-01

    We propose a comprehensive analysis of the surface heterogeneity of a selected sample of dwarf-planets and candidates to be considered as dwarf-planets. The sample has been carefully selected to reach the scientific goals with a relative low cost in observing time. The research proposed here will be based on the analysis of the light-curve of these objects obtained using IRAC/Spitzer photometry. KBOs likely retain some of the most primitive material in the Solar System. Models of the retention of volatiles by small-bodies in the Solar System show that dwarf-planets can retain most of the original inventory of volatiles. A good example is Pluto. The surface of this body is formed by patches of CH4, N2 and CO and exhibits a large degree of surface heterogeneity. Our preliminary results of the IRAC/Spitzer light curves of Pluto, obtained by this group in 2004 and 2014, show the potential of these data to map the surface distribution of the different species of ices on the surface of KBOs. For this project we have selected six objects (out of a list of 15) that are ideal for this study using Spitzer photometry. Our sample covers two classes of bodies: Eris, Makemake and Haumea, all large enough to retain volatiles and so how signs of sublimation and condensation cycles on their surfaces; and Quaoar, Varuna and Ixion (D<1000 km) that may not have retained volatiles. If signs of heterogeneity are detected on IRAC data from these medium bodies (as suggested by previous studies) this could be due to a combination of collisions and irradiation. By addressing the compositional heterogeneity of this sample of KBOs the proposed work will address gaps in the scientific knowledge of the chemical and dynamical history of the outer Solar System as well as other planetary systems.}

  9. Surface complexation reaction for phase transfer of hydrophobic quantum dot from nonpolar to polar medium.

    PubMed

    Bhandari, Satyapriya; Roy, Shilaj; Pramanik, Sabyasachi; Chattopadhyay, Arun

    2014-09-01

    Chemical reaction between oleate-capped Zn(x)Cd(1-x)S quantum dots (Qdots) and 8-hydroxyquinoline (HQ) led to formation of a surface complex, which was accompanied by transfer of hydrophobic Qdots from nonpolar (hexane) to polar (water) medium with high efficiency. The stability of the complex on the surface was achieved via involvement of dangling sulfide bonds. Moreover, the transferred hydrophilic Qdots--herein called as quantum dot complex (QDC)--exhibited new and superior optical properties in comparison to bare inorganic complexes with retention of the dimension and core structure of the Qdots. Finally, the new and superior optical properties of water-soluble QDC make them potentially useful for biological--in addition to light emitting device (LED)--applications. PMID:25133937

  10. Ethanol oxidation on Pt single-crystal electrodes: surface-structure effects in alkaline medium.

    PubMed

    Busó-Rogero, Carlos; Herrero, Enrique; Feliu, Juan M

    2014-07-21

    Ethanol oxidation in 0.1 M NaOH on single-crystal electrodes has been studied using electrochemical and FTIR techniques. The results show that the activity order is the opposite of that found in acidic solutions. The Pt(111) electrode displays the highest currents and also the highest onset potential of all the electrodes. The onset potential for the oxidation of ethanol is linked to the adsorption of OH on the electrode surface. However, small (or even negligible) amounts of CO(ads) and carbonate are detected by FTIR, which implies that cleavage of the C-C bond is not favored in this medium. The activity of the electrodes diminishes quickly upon cycling. The diminution of the activity is proportional to the measured currents and is linked to the formation and polymerization of acetaldehyde, which adsorbs onto the electrode surface and prevents further oxidation. PMID:24782218

  11. Enhancement of the visibility of objects located below the surface of a scattering medium

    SciTech Connect

    Demos, Stavros

    2013-11-19

    Techniques are provided for enhancing the visibility of objects located below the surface of a scattering medium such as tissue, water and smoke. Examples of such an object include a vein located below the skin, a mine located below the surface of the sea and a human in a location covered by smoke. The enhancement of the image contrast of a subsurface structure is based on the utilization of structured illumination. In the specific application of this invention to image the veins in the arm or other part of the body, the issue of how to control the intensity of the image of a metal object (such as a needle) that must be inserted into the vein is also addressed.

  12. In-medium short-range dynamics of nucleons: Recent theoretical and experimental advances

    NASA Astrophysics Data System (ADS)

    Atti, Claudio Ciofi degli

    2015-08-01

    The investigation of in-medium short-range dynamics of nucleons, usually referred to as the study of short-range correlations (SRCs), is a key issue in nuclear and hadronic physics. As a matter of fact, even in the simplified assumption that the nucleus could be described as a system of protons and neutrons interacting via effective nucleon-nucleon (NN) interactions, several non trivial problems arise concerning the description of in-medium (NN short-range dynamics, namely: (i) the behavior of the NN interaction at short inter-nucleon distances in medium cannot be uniquely constrained by the experimental NN scattering phase shifts due to off-shell effects; (ii) by rigorous renormalization group (RG) techniques entire families of phase equivalent interactions differing in the short-range part can be derived; (iii) the in-medium NN interaction may be, in principle, different from the free one; (iv) when the short inter-nucleon separation is of the order of the nucleon size, the question arises of possible effects from quark and gluon degrees of freedom. For more than fifty years, experimental evidence of SRCs has been searched by means of various kinds of nuclear reactions, without however convincing results, mainly because the effects of SRCs arise from non observable quantities, like, e.g., the momentum distributions, and have been extracted from observable cross sections where short- and long-range effects, effects from nucleonic and non nucleonic degrees of freedom, and effects from final state interaction, could not be unambiguously separated out. Recent years, however, were witness of new progress in the field: from one side, theoretical and computational progress has allowed one to solve ab initio the many-nucleon non relativistic Schrödinger equation in terms of realistic NN interactions, obtaining realistic microscopic wave functions, unless the case of parametrized wave functions used frequently in the past, moreover the development of advanced treatments

  13. Free surface dynamics of nematic liquid crystal

    NASA Astrophysics Data System (ADS)

    Cummings, Linda; Kondic, Lou; Lam, Michael; Lin, Te-Sheng

    2014-11-01

    Spreading thin films of nematic liquid crystal (NLC) are known to behave very differently to those of isotropic fluids. The polar interactions of the rod-like molecules with each other, and the interactions with the underlying substrate, can lead to intricate patterns and instabilities that are not yet fully understood. The physics of a system even as simple as a film of NLC spreading slowly over a surface (inclined or horizontal) are remarkably complex: the outcome depends strongly on the details of the NLC's behavior at both the substrate and the free surface (so-called ``anchoring'' effects). We will present a dynamic flow model that takes careful account of such nematic-substrate and nematic-free surface interactions. We will present model simulations for several different flow scenarios that indicate the variety of behavior that can emerge. Spreading over a horizontal substrate may exhibit a range of unstable behavior. Flow down an incline also exhibits intriguing instabilities: in addition to the usual transverse fingering, instabilities can be manifested behind the flowing front in a manner reminiscent of Newtonian flow down an inverted substrate. NSF DMS-1211713.

  14. Bubble Dynamics on a Heated Surface

    NASA Technical Reports Server (NTRS)

    Kassemi, M.; Rashidnia, N.

    1999-01-01

    In this work, we study steady and oscillatory thermocapillary and natural convective flows generated by a bubble on a heated solid surface. The interaction between gas and vapor bubbles with the surrounding fluid is of interest for both space and ground-based processing. A combined numerical-experimental approach is adopted here. The temperature field is visualized using Mach-Zehnder and/or Wollaston Prism Interferometry and the flow field is observed by a laser sheet flow visualization technique. A finite element numerical model is developed which solves the transient two-dimensional continuity, momentum, and energy equations and includes the effects of temperature-dependent surface tension and bubble surface deformation. Below the critical Marangoni number, the steady state low-g and 1-g temperature and velocity fields predicted by the finite element model are in excellent agreement with both the visualization experiments in our laboratory and recently published experimental results in the literature. Above the critical Marangoni number, the model predicts an oscillatory flow which is also closely confirmed by experiments. It is shown that the dynamics of the oscillatory flow are directly controlled by the thermal and hydrodynamic interactions brought about by combined natural and thermocapillary convection. Therefore, as numerical simulations show, there are considerable differences between the 1-g and low-g temperature and flow fields at both low and high Marangoni numbers. This has serious implications for both materials processing and fluid management in space.

  15. Optically Transparent Porous Medium for Nondestructive Studies of Microbial Biofilm Architecture and Transport Dynamics

    PubMed Central

    Leis, Andrew P.; Schlicher, Sven; Franke, Hilmar; Strathmann, Martin

    2005-01-01

    We describe a novel and noninvasive, microscopy-based method for visualizing the structure and dynamics of microbial biofilms, individual fluorescent microbial cells, and inorganic colloids within a model porous medium. Biofilms growing in flow cells packed with granules of an amorphous fluoropolymer could be visualized as a consequence of refractive index matching between the solid fluoropolymer grains and the aqueous immersion medium. In conjunction with the capabilities of confocal microscopy for nondestructive optical sectioning, the use of amorphous fluoropolymers as a solid matrix permits observation of organisms and dynamic processes to a depth of 2 to 3 mm, whereas sediment biofilms growing in sand-filled flow cells can only be visualized in the region adjacent to the flow cell wall. This method differs fundamentally from other refractive index-matching applications in that optical transparency was achieved by matching a solid phase to water (and not vice versa), thereby permitting real-time microscopic studies of particulate-containing, low-refractive-index media such as biological and chromatographic systems. PMID:16085878

  16. Dynamics of surface tension in microgravity environment

    NASA Technical Reports Server (NTRS)

    Hung, R. J.; Tsao, Y. D.; Leslie, F. W.; Hong, B. B.

    1990-01-01

    Time-dependent evolutions of the profile of free surface (bubble shapes) for a cylindrical container partially filled with a Newtonian fluid of constant density, rotating about its axis of symmetry, in low and microgravity environments, have been studied. Numerical computations of the dynamics of bubble shapes have been carried out (1) linear time-dependent functions of spin-up and spin-down in low and microgravity environments, (2) linear time-dependent functions of increasing and decreasing gravity environment at high and low rotating cylinder speeds, (3) time-dependent step functions of spin-up and spin-down in a low-gravity environment, and (4) sinusoidal function oscillation of the gravity environment at high and low rotating cylinder speeds.

  17. Laser ablation of liquid surface in air induced by laser irradiation through liquid medium

    NASA Astrophysics Data System (ADS)

    Utsunomiya, Yuji; Kajiwara, Takashi; Nishiyama, Takashi; Nagayama, Kunihito; Kubota, Shiro; Nakahara, Motonao

    2010-10-01

    The pulse laser ablation of a liquid surface in air when induced by laser irradiation through a liquid medium has been experimentally investigated. A supersonic liquid jet is observed at the liquid-air interface. The liquid surface layer is driven by a plasma plume that is produced by laser ablation at the layer, resulting in a liquid jet. This phenomenon occurs only when an Nd:YAG laser pulse (wavelength: 1064 nm) is focused from the liquid onto air at a low fluence of 20 J/cm2. In this case, as Fresnel’s law shows, the incident and reflected electric fields near the liquid surface layer are superposed constructively. In contrast, when the incident laser is focused from air onto the liquid, a liquid jet is produced only at an extremely high fluence, several times larger than that in the former case. The similarities and differences in the liquid jets and atomization processes are studied for several liquid samples, including water, ethanol, and vacuum oil. The laser ablation of the liquid surface is found to depend on the incident laser energy and laser fluence. A pulse laser light source and high-resolution film are required to observe the detailed structure of a liquid jet.

  18. Chain dynamics near surfaces: an unconventional approach

    NASA Astrophysics Data System (ADS)

    Masson, Jean-Loup; Green, Peter

    2001-03-01

    Chain dynamics near surfaces: an unconventional approach Jean-Loup Masson and Peter F. Green Graduate Program in Materials Science and Department of Chemical Engineering The University of Texas at Austin When the thickness of a polymer film is comparable to the radius of gyration, or a few radii of gyration, of the polymer chains, the properties of the film can differ appreciably from the bulk. Indeed, recent studies have documented the existence of changes of the glass transition, translational chain diffusion and the viscosity, with decreasing film thickness. For liquid films, a few tens of nanometers thick, on substrates, the disjoining pressure has a significant effect on the stability of the film. This can result on the formation of patterns reflecting fluctuations in the local film thickness. The structural, time-dependent, evolution of the film is a reflection of the effects of the disjoining pressure together with the translational dynamics of the chains. This presentation discusses the structural evolution of a thin polymer film in light of theoretical models to gain insight into the manner in which the diffusion and viscosity of the polymer changes with decreasing film thickness.

  19. Differential dopaminergic regulation of inwardly rectifying potassium channel mediated subthreshold dynamics in striatal medium spiny neurons.

    PubMed

    Zhao, Bo; Zhu, Junling; Dai, Dongqing; Xing, Junling; He, Jiahou; Fu, Zhanyan; Zhang, Lei; Li, Zhuyi; Wang, Wenting

    2016-08-01

    The dorsal striatum plays a key role in motor control and cognitive processes. Proper functioning of the striatum relies on the fine dynamic balance between the direct pathway projection medium spiny neurons (MSNs) that express D1 dopamine receptor (D1 MSNs) and indirect pathway projection MSNs that express D2 dopamine receptor (D2 MSNs). The inwardly rectifying K(+) channels (Kir), which express on both D1 and D2 MSNs, participate in the subthreshold dynamics including the membrane resonance and dendritic integration. However, it remains unclear whether dopamine differentially regulates Kir mediated subthreshold dynamics in two subtypes MSNs. Using transgenic mice that express either tdTomato in D1 MSNs or eGFP in D2 MSNs, we explored the Kir mediated subthreshold dynamics in D1 or D2 MSNs with whole cell patch clamp recording in acute brain slices. We found that D1 receptor agonist increased the Kir current while D2 receptor activation decreased the Kir conductance. The dopamine regulation of the Kir enhanced the resonant frequency and reduced the resonant impedance of D1 MSNs. The converse is ture for D2 MSNs. It also caused an opposing effect on dendritic integration between D1 and D2 MSNs, which can promote stability of the two pathways. The D1 receptor activation modulated Kir through cAMP-PKA signaling, whereas the D2 receptor modulated Kir through PLC-PKC signaling. Our findings demonstrated the differential dopaminergic regulation role of Kir, which mediates distinct subthreshold dynamics, and thus, contributes to the role of dopamine in fine tuning the balance of the striatal direct and indirect pathway activities. PMID:27018450

  20. Insights into Medium-chain Acyl-CoA Dehydrogenase Structure by Molecular Dynamics Simulations.

    PubMed

    Bonito, Cátia A; Leandro, Paula; Ventura, Fátima V; Guedes, Rita C

    2016-08-01

    The medium-chain acyl-CoA dehydrogenase (MCAD) is a mitochondrial enzyme that catalyzes the first step of mitochondrial fatty acid β-oxidation (mFAO) pathway. Its deficiency is the most common genetic disorder of mFAO. Many of the MCAD disease-causing variants, including the most common p.K304E variant, show loss of function due to protein misfolding. Herein, we used molecular dynamics simulations to provide insights into the structural stability and dynamic behavior of MCAD wild-type (MCADwt) and validate a structure that would allow reliable new studies on its variants. Our results revealed that in both proteins the flavin adenine dinucleotide (FAD) has an important structural role on the tetramer stability and also in maintaining the volume of the enzyme catalytic pockets. We confirmed that the presence of substrate changes the dynamics of the catalytic pockets and increases FAD affinity. A comparison between the porcine MCADwt (pMCADwt) and human MCADwt (hMCADwt) structures revealed that both proteins are essentially similar and that the reversion of the double mutant E376G/T255E of hMCAD enzyme does not affect the structure of the protein neither its behavior in simulation. Our validated hMCADwt structure is crucial for complementing and accelerating the experimental studies aiming for the discovery and development of potential stabilizers of MCAD variants as candidates for the treatment of MCAD deficiency (MCADD). PMID:26992026

  1. An effective medium study of surface plasmon polaritons in nanostructured gratings using attenuated total reflection

    SciTech Connect

    Tyboroski, M. H.; Anderson, N. R.; Camley, R. E.

    2014-01-07

    Recent work studied surface plasmon resonances in structured materials by the method of attenuated total reflection using a prism on top of a metallic grating. That calculation considered Transverse Magnetic polarized radiation, involved an expansion in 121 Fourier modes, and found a number of interesting features. Many of these features were attributed to localized plasmons or other factors, which arise from a discrete structure. We use a simple effective medium theory to address the same problem, and find many of the same reflection features observed in the more complex calculation, indicating that localization is not an important factor. We also evaluate the possibility of using some of the new features in the reflection spectrum for bio-sensing and find that the sensitivity of the system to small changes in relative permittivity is increased compared to some standard methods.

  2. Charge states of medium energy He ions scattered from single and poly-crystal surfaces

    NASA Astrophysics Data System (ADS)

    Okazawa, T.; Shibuya, K.; Nishimura, T.; Kido, Y.

    2007-03-01

    High-resolution medium energy ion scattering (MEIS) spectroscopy has unveiled fine structures of surfaces and interfaces. However, problematic issues arise due to its excellent energy resolution. In particular, when one uses He+ beams, the He+ fraction η+ (1) for the scattering component from top-layer atoms is frequently non-equilibrated owing to short exit path length. This leads to significant uncertainties of the absolute amount of atoms located on top of a surface. To overcome this difficulty, it is essential to acquire reliable data of equilibrium and non-equilibrium charge fractions and also to model the charge exchange process based on a simple picture. In this paper, we analyze the MEIS spectra from single and poly crystals of Si, Ni and Cu together with c-axis oriented graphite and derive electron capture (σ10) and loss (σ01) cross sections dependent on emerging ion velocity. Here, we assume that a He ion when arrives at a Maffin-tin sphere after a large angle collision takes the He+ state and then undergoes many charge exchanging collisions with valence electrons until leaving an electronic surface. The velocity dependent σ10 and σ01 values derived well reproduce equilibrium and non-equilibrium charge fractions of He+ except for graphite and poly-crystal Si at relatively large emerging angles. Such a deviation comes from the markedly anisotropic distributions of the valence electrons of Si and graphite with strong covalent bonds.

  3. Impact of momentum space anisotropy on heavy quark dynamics in a QGP medium

    NASA Astrophysics Data System (ADS)

    Chandra, Vinod; Das, Santosh K.

    2016-05-01

    Momentum space anisotropy present in the quark and gluon distribution functions in relativistic heavy ion collisions induces Chromo-Weibel instability in the hot QCD medium created therein. The impact of the Chromo-Weibel instability on the dynamics of a heavy quark (HQ) traversing in the QGP medium is investigated within the framework of kinetic theory by studying the momentum and temperature behavior of HQ drag and diffusion coefficients. The physics of anisotropy is captured in an effective Vlasov term in the transport equation. The effects of the instability are handled by making a relation with the phenomenologically known jet-quenching parameter in RHIC and LHC. Interestingly, the presence of instability significantly affects the temperature and momentum dependences of the HQ drag and diffusion coefficients. These results may have appreciable impact on the experimental observables such as the nuclear suppression factor, RA A(pT) , and the elliptic flow, v2(pT), of heavy mesons in heavy ion collisions at RHIC and LHC energies which is a matter of future investigation.

  4. Dynamic modeling of mass-flowing linear medium with large amplitude displacement and rotation

    NASA Astrophysics Data System (ADS)

    Hong, Difeng; Tang, Jiali; Ren, Gexue

    2011-11-01

    In this paper, a dynamic model of a linear medium with mass flow, such as traveling strings, cables, belts, beams or pipes conveying fluids, is proposed, in the framework of Arbitrary-Lagrange-Euler (ALE) description. The material coordinate is introduced to characterize the mass-flow of the medium, and the Absolute Nodal Coordinate Formulation (ANCF) is employed to capture geometric nonlinearity of the linear media under large displacement and rotation. The governing equations are derived in terms of d'Alembert's principle. When using an ALE description, complex mass-flowing boundary conditions can be easily enforced. Numerical examples are presented to validate the proposed method by comparison with analytical results of simplified models. The computed critical fluid velocity for the stability of a cantilevered pipe conveying fluid is correlated with the available theory in literature. The large amplitude limit-cycle oscillations of flexible pipes conveying fluid are presented, and the effect of the velocity of the fluid on the static equilibrium of the pipe under gravity is investigated.

  5. Simulated dynamic response of a multi-stage compressor with variable molecular weight flow medium

    NASA Technical Reports Server (NTRS)

    Babcock, Dale A.

    1995-01-01

    A mathematical model of a multi-stage compressor with variable molecular weight flow medium is derived. The modeled system consists of a five stage, six cylinder, double acting, piston type compressor. Each stage is followed by a water cooled heat exchanger which serves to transfer the heat of compression from the gas. A high molecular weight gas (CFC-12) mixed with air in varying proportions is introduced to the suction of the compressor. Condensation of the heavy gas may occur in the upper stage heat exchangers. The state equations for the system are integrated using the Advanced Continuous Simulation Language (ACSL) for determining the system's dynamic and steady state characteristics under varying operating conditions.

  6. Surface NMR measurement of proton relaxation times in medium to coarse-grained sand aquifer.

    PubMed

    Shushakov, O A

    1996-01-01

    A surface NMR investigation of groundwater in the geomagnetic field is under study. To detect the surface NMR a wire loop with a diameter of about 100 m, being an antenna for both an exciting field source and the NMR signal receiver, is laid out on the ground. A sinusoidal current pulse with a rectangular envelope is passed through the loop to excite the NMR signal. The carrier frequency of the oscillating current in this pulse is equal to the Larmor frequency of protons in the Earth's magnetic field. The current amplitude is changed up to 200 amps and the pulse duration is fixed and is equal to 40 ms. The exciting pulse is followed by an induction emf signal caused by the Larmor nuclear precession in geomagnetic field. The relaxation times T1, T2, and T2* were measured by the surface NMR for both groundwater in medium to coarse-grained sand at borehole and for bulk water under the ice surface of frozen lake. To determine T1, a longitudinal interference in experiments with repeated pulses was measured. A sequence with equal period between equal excitation pulses was used. The relaxation times T1, T2, measured for bulk water under the ice of the Ob reservoir were 1.0 s and 0.7 s, respectively. To estimate an influence of dissolved oxygen T1 of the same water at the same temperature was measured by lab NMR with and without pumping of oxygen. The relaxation time T1 measured for water in the medium to coarse-grained sand is 0.65 s. The relaxation time T2 estimated by spin echo sequence is found to be equal to 0.15 s. The relaxation time T2* is found to be about 80 ms. This result contradicts published earlier phenomenological correlation between relaxation time T2* and grain size of water-bearing rock. This could be as a result of unsound approach based on grain size or influence of paramagnetic impurities. PMID:8970122

  7. Photoinduced bulk-surface dynamics: time resolved two photon photoemission signals at semiconductor surfaces

    NASA Astrophysics Data System (ADS)

    Ramakrishna, S.; Willig, F.; Knorr, A.

    2004-06-01

    A free particle theory of photoinduced bulk-surface dynamics at semiconductor surfaces is developed wherein relaxation processes arising from electron-electron and electron-phonon scattering are treated phenomenologically. The role played by bulk-surface dynamics in the thermalization and cooling processes of the bulk and the complementary issue of how bulk dynamics influences the surface state occupancy are both studied. Time resolved 2PPE spectra is analysed both in the context of pure bulk as well as combined bulk-surface dynamics and its relation to the time dependent populations in the conduction band and surface states is discussed.

  8. Porous medium convection at large Rayleigh number: Studies of coherent structure, transport, and reduced dynamics

    NASA Astrophysics Data System (ADS)

    Wen, Baole

    Buoyancy-driven convection in fluid-saturated porous media is a key environmental and technological process, with applications ranging from carbon dioxide storage in terrestrial aquifers to the design of compact heat exchangers. Porous medium convection is also a paradigm for forced-dissipative infinite-dimensional dynamical systems, exhibiting spatiotemporally chaotic dynamics if not "true" turbulence. The objective of this dissertation research is to quantitatively characterize the dynamics and heat transport in two-dimensional horizontal and inclined porous medium convection between isothermal plane parallel boundaries at asymptotically large values of the Rayleigh number Ra by investigating the emergent, quasi-coherent flow. This investigation employs a complement of direct numerical simulations (DNS), secondary stability and dynamical systems theory, and variational analysis. The DNS confirm the remarkable tendency for the interior flow to self-organize into closely-spaced columnar plumes at sufficiently large Ra (up to Ra ≃ 105), with more complex spatiotemporal features being confined to boundary layers near the heated and cooled walls. The relatively simple form of the interior flow motivates investigation of unstable steady and time-periodic convective states at large Ra as a function of the domain aspect ratio L. To gain insight into the development of spatiotemporally chaotic convection, the (secondary) stability of these fully nonlinear states to small-amplitude disturbances is investigated using a spatial Floquet analysis. The results indicate that there exist two distinct modes of instability at large Ra: a bulk instability mode and a wall instability mode. The former usually is excited by long-wavelength disturbances and is generally much weaker than the latter. DNS, strategically initialized to investigate the fully nonlinear evolution of the most dangerous secondary instability modes, suggest that the (long time) mean inter-plume spacing in

  9. Dynamics of the Streptococcus gordonii Transcriptome in Response to Medium, Salivary α-Amylase, and Starch

    PubMed Central

    Haase, Elaine M.; Feng, Xianghui; Pan, Jiachuan; Miecznikowski, Jeffrey C.

    2015-01-01

    Streptococcus gordonii, a primary colonizer of the tooth surface, interacts with salivary α-amylase via amylase-binding protein A (AbpA). This enzyme hydrolyzes starch to glucose, maltose, and maltodextrins that can be utilized by various oral bacteria for nutrition. Microarray studies demonstrated that AbpA modulates gene expression in response to amylase, suggesting that the amylase-streptococcal interaction may function in ways other than nutrition. The goal of this study was to explore the role of AbpA in gene regulation through comparative transcriptional profiling of wild-type KS1 and AbpA− mutant KS1ΩabpA under various environmental conditions. A portion of the total RNA isolated from mid-log-phase cells grown in 5% CO2 in (i) complex medium with or without amylase, (ii) defined medium (DM) containing 0.8% glucose with/without amylase, and (iii) DM containing 0.2% glucose and amylase with or without starch was reverse transcribed to cDNA and the rest used for RNA sequencing. Changes in the expression of selected genes were validated by quantitative reverse transcription-PCR. Maltodextrin-associated genes, fatty acid synthesis genes and competence genes were differentially expressed in a medium-dependent manner. Genes in another cluster containing a putative histidine kinase/response regulator, peptide methionine sulfoxide reductase, thioredoxin protein, lipoprotein, and cytochrome c-type protein were downregulated in KS1ΩabpA under all of the environmental conditions tested. Thus, AbpA appears to modulate genes associated with maltodextrin utilization/transport and fatty acid synthesis. Importantly, in all growth conditions AbpA was associated with increased expression of a potential two-component signaling system associated with genes involved in reducing oxidative stress, suggesting a role in signal transduction and stress tolerance. PMID:26025889

  10. Improving the forming capability of laser dynamic forming by using rubber as a forming medium

    NASA Astrophysics Data System (ADS)

    Shen, Zongbao; Liu, Huixia; Wang, Xiao; Wang, Cuntang

    2016-04-01

    Laser dynamic forming (LDF) is a novel high velocity forming technique, which employs laser-generated shock wave to load the sample. The forming velocity induced by the high energy laser pulse may exceed the critical forming velocity, resulting in the occurrence of premature fracture. To avoid the above premature fracture, rubber is introduced in LDF as a forming medium to prolong the loading duration in this paper. Laser induced shock wave energy is transferred to the sample in different forming stages, so the forming velocity can be kept below the critical forming velocity when the initial laser energy is high for fracture. Bulge forming experiments with and without rubber were performed to study the effect of rubber on loading duration. The experimental results show that, the shock wave energy attenuates during the propagation through the rubber layer, the rubber can avoid the premature fracture. So the plastic deformation can continue, the forming capability of LDF is improved. Due to the severe plastic deformation under rubber compression, adiabatic shear bands (ASB) occur in LDF with rubber. The material softening in ASB leads to the irregular fracture, which is different from the premature fracture pattern (regular fracture) in LDF without rubber. To better understand this deformation behavior, Johnson-Cook model is used to simulate the dynamic response and the evolution of ASB of copper sample. The simulation results also indicate the rubber can prolong the loading duration.

  11. Associative networks with diluted patterns: dynamical analysis at low and medium load

    NASA Astrophysics Data System (ADS)

    Bartolucci, S.; Annibale, A.

    2014-10-01

    In this work, we solve the dynamics of pattern-diluted associative networks, evolving via sequential Glauber update. We derive dynamical equations for the order parameters that quantify the simultaneous pattern recall of the system, and analyse the nature and stability of the stationary solutions by means of linear stability analysis as well as Monte Carlo simulations. We investigate the parallel retrieval capabilities of the system in different regions of the phase space, in particular in the low and medium storage regimes and for finite and extreme pattern dilution. Results show that in the absence of patterns cross-talk, all patterns are recalled symmetrically for any temperature below criticality, while in the presence of pattern cross-talk, symmetric retrieval becomes unstable as temperature is lowered and a hierarchical retrieval takes over. The shape of the hierarchical retrieval occurring at zero temperature is provided. The parallel retrieval capabilities of the network are seen to degrade gracefully in the regime of strong interference, but they are not destroyed.

  12. The dynamic Virtual Fields Method on rubbers at medium and high strain rates

    NASA Astrophysics Data System (ADS)

    Yoon, Sung-Ho; Siviour, Clive R.

    2015-09-01

    Elastomeric materials are widely used for energy absorption applications, often experiencing high strain rate deformations. The mechanical characterization of rubbers at high strain rates presents several experimental difficulties, especially associated with achieving adequate signal to noise ratio and static stress equilibrium, when using a conventional technique such as the split Hopkinson pressure bar. In the present study, these problems are avoided by using the dynamic Virtual Fields Method (VFM) in which acceleration fields, clearly generated by the non-equilibrium state, are utilized as a force measurement with in the frame work of the principle of virtual work equation. In this paper, two dynamic VFM based techniques are used to characterise an EPDM rubber. These are denoted as the linear and nonlinear VFM and are developed for (respectively) medium (drop-weight) and high (gas-gun) strain-rate experiments. The use of the two VFMs combined with high-speed imaging analysed by digital imaging correlation allows the identification of the parameters of a given rubber mechanical model; in this case the Ogden model is used.

  13. Synthesis of Formamide and Related Organic Species in the Interstellar Medium via Chemical Dynamics Simulations

    NASA Astrophysics Data System (ADS)

    Spezia, Riccardo; Jeanvoine, Yannick; Hase, William L.; Song, Kihyung; Largo, Antonio

    2016-08-01

    We show, by means of direct dynamics simulations, how it is possible to define possible reactants and mechanisms leading to the formation of formamide in the interstellar medium. In particular, different ion–molecule reactions in the gas phase were considered: NH3OH+, NH2OH{}2+, H2COH+, and NH4 + for the ions and NH2OH, H2CO, and NH3 for the partner neutrals. These calculations were combined with high level ab initio calculations to investigate possible further evolution of the products observed. In particular, for formamide, we propose that the NH2OH{}2+ + H2CO reaction can produce an isomer, NH2OCH{}2+, that, after dissociative recombination, can produce neutral formamide, which was observed in space. The direct dynamics do not pre-impose any reaction pathways and in other reactions, we did not observe the formation of formamide or any possible precursor. On the other hand, we obtained other interesting reactions, like the formation of NH2CH{}2+. Finally, some radiative association processes are proposed. All of the results obtained are discussed in light of the species observed in radioastronomy.

  14. A molecular dynamic study of layered hydroxide induced depletion of mobile anions within the extracellular medium

    NASA Astrophysics Data System (ADS)

    Tsukanov, Alexey A.; Psakhie, Sergey G.

    2015-10-01

    The strong surface electric charge density of clay mineral host nanolayers enables their use as host-guest nanohybrids in many different areas of application. In particular, layered double hydroxides (LDH) of metals have found applications in medicine. Drug-LDH or gene-LDH nanohybrids are used for targeted delivery of biomedical agents to diseased cells or cancer cells. Fragments of the LDH host nanolayers may remain both within the cell and in the extracellular medium after drug delivery. How these charged nanosheets affect the cell electrostatics is still poorly understood. In the present paper, the idealized case of a single pure Mg2/Al-LDH nanolayer interacting with the extracellular anion environment was investigated to estimate the order of magnitude of a possible shift of the cell membrane equilibrium potential. An approximate dependence of the change in the chloride equilibrium membrane potential on the concentration of pure Mg2/Al-LDH nanosheets was determined.

  15. Consideration for the dynamic depolarization in the effective-medium model for description of optical properties for anisotropic nanostructured semiconductors

    SciTech Connect

    Golovan, L. A.; Zabotnov, S. V. Timoshenko, V. Yu.; Kashkarov, P. K.

    2009-02-15

    The effective-medium model has been generalized within the dipole approximation, with allowance for the shape anisotropy and dynamic depolarization of semiconductor nanoparticles. The calculations revealed nonmonotonic dependences for the birefringence and dichroism on the nanoparticle size. Comparison of the measured and calculated refractive index dispersion of birefringent porous silicon layers in the near-IR region indicates that consideration for the dynamic depolarization gives a better description of the optical properties for this material in comparison with the generally used effective-medium electrostatic approximation.

  16. The effect of gain medium length on dynamic mode stability in semiconductor lasers with a long intra-cavity filter.

    PubMed

    Kwon, Oh Kee; Lee, Chul Wook; Shin, Jang Wook; Sim, Eun Deok; Kim, Jong-Hoi; Lee, Dong Hun; Bang, Dong Soo; Baek, Yong Soon

    2009-12-01

    We investigate theoretically and experimentally the effect of the physical length of gain medium on dynamic mode stability in semiconductor lasers with an intra-cavity filter. In simulation, two types of analysis models were used to examine the lasing properties and to analyze the dynamic mode stability of the external-cavity system, respectively. In experiment, two different kinds of the structures were fabricated and their spectra were analyzed. Both simulation and measurement results show clearly the length of the gain medium has a critical influence on the stability around the peak wavelength of the filter. PMID:20052209

  17. Effective-medium theory of surfaces and metasurfaces containing two-dimensional binary inclusions.

    PubMed

    Alexopoulos, A

    2010-04-01

    The paper extends one-body effective-medium theory to incorporate the correct second-order interactions in a two-dimensional Maxwell-Garnett theory. The two-body inclusion problem is solved using the averaged dipole moments that are induced by the scattering electromagnetic field on the medium/inclusion system. By incorporating the appropriate polarizability factor in the solutions, conventional right-handed media with binary embeddings are analyzed while a different form for the polarizability term allows the study of the effective properties of a metasurface. In both cases, it is shown that the two-body coefficient to second order in the low area fraction of inclusions is exact, while the corresponding results of the Maxwell-Garnett and Bruggeman theories are incorrect. This is especially true in the superconducting and holes limits, respectively. In the study of metasurfaces, the requirement for electromagnetic screening of the inclusions as well as the requirement needed to achieve the Fröhlich condition are stated. Negative permittivity and permeability are presented for strong-scattering showing negative resonances for a given frequency spectrum. It is shown that these resonances disappear when we derive the weak-scattering limit. The possibility of obtaining doubly negative effective permittivity and permeability is discussed by using an appropriate polarization for the applied electromagnetic field propagating in the metasurface. Finally, the potential difference and hence voltage and capacitance between binary inclusions is determined for surfaces/metasurfaces which allows, in the case of metasurfaces, the behavior of split-ring-type resonators to be investigated. PMID:20481853

  18. Hydration dynamics near a model protein surface

    SciTech Connect

    Russo, Daniela; Hura, Greg; Head-Gordon, Teresa

    2003-09-01

    The evolution of water dynamics from dilute to very high concentration solutions of a prototypical hydrophobic amino acid with its polar backbone, N-acetyl-leucine-methylamide (NALMA), is studied by quasi-elastic neutron scattering and molecular dynamics simulation for both the completely deuterated and completely hydrogenated leucine monomer. We observe several unexpected features in the dynamics of these biological solutions under ambient conditions. The NALMA dynamics shows evidence of de Gennes narrowing, an indication of coherent long timescale structural relaxation dynamics. The translational water dynamics are analyzed in a first approximation with a jump diffusion model. At the highest solute concentrations, the hydration water dynamics is significantly suppressed and characterized by a long residential time and a slow diffusion coefficient. The analysis of the more dilute concentration solutions takes into account the results of the 2.0M solution as a model of the first hydration shell. Subtracting the first hydration layer based on the 2.0M spectra, the translational diffusion dynamics is still suppressed, although the rotational relaxation time and residential time are converged to bulk-water values. Molecular dynamics analysis shows spatially heterogeneous dynamics at high concentration that becomes homogeneous at more dilute concentrations. We discuss the hydration dynamics results of this model protein system in the context of glassy systems, protein function, and protein-protein interfaces.

  19. Porous medium coffee ring effect and other factors affecting the first crystallisation time of sodium chloride at the surface of a drying porous medium

    NASA Astrophysics Data System (ADS)

    Hidri, F.; Sghaier, N.; Eloukabi, H.; Prat, M.; Nasrallah, S. Ben

    2013-12-01

    We study the distribution of ions in a drying porous medium up to the formation of first crystals at the surface. The study is based on comparisons between numerical simulations and experiments with packings of glass beads. The experimental configuration, which is representative of many previous drying experiments, is characterized by the formation of an efflorescence fairy ring at the surface of the porous medium. The preferential formation of crystals at the periphery is explained by the combined effect of higher evaporation fluxes at the surface periphery, as in the classical coffee ring problem, and variations in the porosity near the wall bordering the packing. It is shown that both effects have a great impact on the time marking the occurrence of first crystals, which is referred to as the first crystallization time. The experiments indicate that the first crystallization time increases with a decreasing bead size for a given initial ion concentration. This is explained by the variation with bead size of the characteristic size of the near wall region where a preferential desaturation of the sample occurs as a result of the porosity increase near the wall. The study also reveals a significant salt supersaturation effect. This represents a noticeable fact in relation with salt weathering issues.

  20. Acidity-Facilitated Mobilization of Surface Clay Colloid from Natural Sand Medium

    NASA Astrophysics Data System (ADS)

    Huang, Y.; Wang, C.; Mohanty, B. P.

    2010-12-01

    Colloid mobilization and migration in a soil system has attracted increasing scrutiny for its role in facilitating colloid-borne transport of contaminants in the environments. In many previous studies, pH was evoked as a major factor in mobilizing surface colloids through inducing favorable surface charge and electrostatic conditions. The possible direct role of acidity with H+ as a chemical agent has remained largely obscured behind the indirect role of pH. In this study, we demonstrated through column flow-through tests that cyclical elution of natural sand media with weak acid and base solutions can greatly facilitate detachment and transport of surface clay colloids. We found that while elevating pH to an alkaline condition helped release the loosely-attached surface clays, a pretreatment with H+ could facilitate the mobilization of chemically-bonded clay colloids through lysing of labile Ca and Mg ions. A quantitative relation was observed that 1 mmol H+ could lyse about 0.5 mmol Ca2+ and Mg2+ and subsequently resulted in a release of about 1,200 mg clay during base elution when repulsive force between particles dominated. Natural organic acids such as citric acid and acetic acid in environment-relevant low concentrations (<1mM and pH>5.0) were as effective as HCl with a stronger acidic condition. The small mass ratio of Ca and Mg over colloid released and the nature of weak acid used suggest that the mobilization was less likely due to dissolution of cement casing than lysing of labile interstitial Ca and Mg by H+, which severed Ca and Mg bridging bonds between particles. Natural acidity is generated in abundance from various bio- and geochemical processes; e.g., many plants produce citric acid through citric acid cycle metabolism; biodegradation of dead organic matter forms humic acids. We postulate that natural proton dynamics in tendon with pH oscillation accompanied with various soil biogeochemical processes could play a major role in subsurface clay

  1. Acceleration of electrons by a laser pulse at its output onto an optical surface of the vacuum – transparent medium interface. Laser synchrotron

    NASA Astrophysics Data System (ADS)

    Romanovskiy, M. Yu

    2016-05-01

    We consider the electron dynamics in the field of an electromagnetic wave produced at the vacuum – transparent medium interface upon reflection from the boundary, close to total internal reflection. The propagation velocity of a constant phase of the electromagnetic wave along the interface can vary from c/n to infinity (c is the speed of light in vacuum, and n is the refractive index of the medium at the interface). In this case, there emerge regions of positive and negative phases of the field with wavelengths, approximately equal to half the wavelength of the original laser beam, which can propagate at a speed close to that of light in vacuum. If a beam of relativistic electrons propagates along the surface, they can gain energy and accelerate, as well as radiate. With closed trajectories of electron motion, a laser synchrotron will be implemented as a result of many acceleration cycles.

  2. Real-time criteria based on spectral dynamics of medium response for the detection and identification of substance using THz signal

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2014-10-01

    We propose effective criteria based on the analysis of spectral dynamics of medium response for the detection and identification of dangerous substances at using pulsed THz signal containing a few cycles and fixed absolute phase. These criteria are integral criteria in time. We show the applicability of these criteria for distinguishing the drugs and for drugs detection in the mixture with neutral substances and explosives in transmission mode. We also apply these criteria for the detection of PWM C4 explosive with complicated shape of the surface in reflection mode.

  3. Response surface methodology for the optimization of keratinase production in culture medium containing feathers produced by Kocuria rosea.

    PubMed

    Bernal, C; Diaz, I; Coello, N

    2006-05-01

    A 43-fold increase in keratinase production by Kocuria rosea was achieved in batch fermentation using response surface methodology. Factorial designs were used to select the components of a culture medium that showed a significant effect on keratinase production. An orthogonal-central composite experimental design was performed, with only two (feathers and magnesium) from nine initial compounds being further analyzed by response surface methodology. An optimum keratinase production of 14 886.9 U/mg was obtained with the following medium composition (per litre): NH4Cl, 0.3 g; NaCl, 0.3 g; K2HPO4, 3.2 g; KH2PO4, 4.0 g; MgSO4.6H2O, 0.5 g; yeast extract, 0.1 g; and finely milled feathers, 30 g. The medium was shaken at 400 r/min with an incubation period of 14 h at 40 degrees C. PMID:16699569

  4. Convection and reaction in a diffusive boundary layer in a porous medium: Nonlinear dynamics

    NASA Astrophysics Data System (ADS)

    Andres, Jeanne Therese H.; Cardoso, Silvana S. S.

    2012-09-01

    We study numerically the nonlinear interactions between chemical reaction and convective fingering in a diffusive boundary layer in a porous medium. The reaction enhances stability by consuming a solute that is unstably distributed in a gravitational field. We show that chemical reaction profoundly changes the dynamics of the system, by introducing a steady state, shortening the evolution time, and altering the spatial patterns of velocity and concentration of solute. In the presence of weak reaction, finger growth and merger occur effectively, driving strong convective currents in a thick layer of solute. However, as the reaction becomes stronger, finger growth is inhibited, tip-splitting is enhanced and the layer of solute becomes much thinner. Convection enhances the mass flux of solute consumed by reaction in the boundary layer but has a diminishing effect as reaction strength increases. This nonlinear behavior has striking differences to the density fingering of traveling reaction fronts, for which stronger chemical kinetics result in more effective finger merger owing to an increase in the speed of the front. In a boundary layer, a strong stabilizing effect of reaction can maintain a long-term state of convection in isolated fingers of wavelength comparable to that at onset of instability.

  5. Active site dynamics in the zinc-dependent medium chain alcohol dehydrogenase superfamily

    PubMed Central

    Baker, Patrick J.; Britton, K. Linda; Fisher, Martin; Esclapez, Julia; Pire, Carmen; Bonete, Maria Jose; Ferrer, Juan; Rice, David W.

    2009-01-01

    Despite being the subject of intensive investigations, many aspects of the mechanism of the zinc-dependent medium chain alcohol dehydrogenase (MDR) superfamily remain contentious. We have determined the high-resolution structures of a series of binary and ternary complexes of glucose dehydrogenase, an MDR enzyme from Haloferax mediterranei. In stark contrast to the textbook MDR mechanism in which the zinc ion is proposed to remain stationary and attached to a common set of protein ligands, analysis of these structures reveals that in each complex, there are dramatic differences in the nature of the zinc ligation. These changes arise as a direct consequence of linked movements of the zinc ion, a zinc-bound bound water molecule, and the substrate during progression through the reaction. These results provide evidence for the molecular basis of proton traffic during catalysis, a structural explanation for pentacoordinate zinc ion intermediates, a unifying view for the observed patterns of metal ligation in the MDR family, and highlight the importance of dynamic fluctuations at the metal center in changing the electrostatic potential in the active site, thereby influencing the proton traffic and hydride transfer events. PMID:19131516

  6. Dynamic behavior of the incoherent optical spatial solitons in a nonlocal nonlinear medium

    NASA Astrophysics Data System (ADS)

    Zhen, Hui-Ling; Tian, Bo; Xie, Xi-Yang; Sun, Ya

    2015-06-01

    Dynamic behavior of the propagation of incoherent optical spatial solitons in a nonlocal nonlinear medium is investigated. By means of the Hirota method, we obtain the soliton solutions, based on which we find that ? is positively related to ?, but inversely related to ? and ?, whereas ? is independent of them, with ? as the slowly varying amplitude of the beam, ? as the refractive index change, ?, ?, and ? as the unperturbed refractive index, frequency of the propagating beam, and beam intensity distribution, respectively. Head-on and bound-state soliton interactions are both given, and one interaction period decreases with ? and ? increasing in the bound state one. With the external perturbations taken into consideration, the associated chaotic motions of the perturbed model are studied, and the corresponding power spectra and phase projections are obtained. Both the weak and developed chaotic states are investigated, and the difference between them roots in the relative magnitude of nonlinearities and perturbations. Such chaotic motions can be weakened via increasing ? and ? or decreasing ?. Periodic motion is obtained with the nonlinearities and perturbations balanced.

  7. Life-space foam: A medium for motivational and cognitive dynamics

    NASA Astrophysics Data System (ADS)

    Ivancevic, Vladimir; Aidman, Eugene

    2007-08-01

    General stochastic dynamics, developed in a framework of Feynman path integrals, have been applied to Lewinian field-theoretic psychodynamics [K. Lewin, Field Theory in Social Science, University of Chicago Press, Chicago, 1951; K. Lewin, Resolving Social Conflicts, and, Field Theory in Social Science, American Psychological Association, Washington, 1997; M. Gold, A Kurt Lewin Reader, the Complete Social Scientist, American Psychological Association, Washington, 1999], resulting in the development of a new concept of life-space foam (LSF) as a natural medium for motivational and cognitive psychodynamics. According to LSF formalisms, the classic Lewinian life space can be macroscopically represented as a smooth manifold with steady force fields and behavioral paths, while at the microscopic level it is more realistically represented as a collection of wildly fluctuating force fields, (loco)motion paths and local geometries (and topologies with holes). A set of least-action principles is used to model the smoothness of global, macro-level LSF paths, fields and geometry. To model the corresponding local, micro-level LSF structures, an adaptive path integral is used, defining a multi-phase and multi-path (multi-field and multi-geometry) transition process from intention to goal-driven action. Application examples of this new approach include (but are not limited to) information processing, motivational fatigue, learning, memory and decision making.

  8. Co-GISAXS technique for investigating surface growth dynamics

    SciTech Connect

    Rainville, Meliha G.; Hoskin, Christa; Ulbrandt, Jeffrey G.; Narayanan, Suresh; Sandy, Alec R.; Zhou, Hua; Headrick, Randall L.; Ludwig, Jr., Karl F.

    2015-12-08

    Detailed quantitative measurement of surface dynamics during thin film growth is a major experimental challenge. Here X-ray Photon Correlation Spectroscopy with coherent hard X-rays is used in a Grazing-Incidence Small-Angle X-ray Scattering (i.e. Co-GISAXS) geometry as a new tool to investigate nanoscale surface dynamics during sputter deposition of a-Si and a-WSi2 thin films. For both films, kinetic roughening during surface growth reaches a dynamic steady state at late times in which the intensity autocorrelation function g2(q,t) becomes stationary. The g2(q,t) functions exhibit compressed exponential behavior at all wavenumbers studied. The overall dynamics are complex, but the most surface sensitive sections of the structure factor and correlation time exhibit power law behaviors consistent with dynamical scaling.

  9. Atomistic spin dynamics and surface magnons.

    PubMed

    Etz, Corina; Bergqvist, Lars; Bergman, Anders; Taroni, Andrea; Eriksson, Olle

    2015-06-24

    Atomistic spin dynamics simulations have evolved to become a powerful and versatile tool for simulating dynamic properties of magnetic materials. It has a wide range of applications, for instance switching of magnetic states in bulk and nano-magnets, dynamics of topological magnets, such as skyrmions and vortices and domain wall motion. In this review, after a brief summary of the existing investigation tools for the study of magnons, we focus on calculations of spin-wave excitations in low-dimensional magnets and the effect of relativistic and temperature effects in such structures. In general, we find a good agreement between our results and the experimental values. For material specific studies, the atomistic spin dynamics is combined with electronic structure calculations within the density functional theory from which the required parameters are calculated, such as magnetic exchange interactions, magnetocrystalline anisotropy, and Dzyaloshinskii-Moriya vectors. PMID:26030259

  10. Dynamics of magnetic particles near a surface: model and experiments on field-induced disaggregation.

    PubMed

    van Reenen, A; Gao, Y; de Jong, A M; Hulsen, M A; den Toonder, J M J; Prins, M W J

    2014-04-01

    Magnetic particles are widely used in biological research and bioanalytical applications. As the corresponding tools are progressively being miniaturized and integrated, the understanding of particle dynamics and the control of particles down to the level of single particles become important. Here, we describe a numerical model to simulate the dynamic behavior of ensembles of magnetic particles, taking account of magnetic interparticle interactions, interactions with the liquid medium and solid surfaces, as well as thermal diffusive motion of the particles. The model is verified using experimental data of magnetic field-induced disaggregation of magnetic particle clusters near a physical surface, wherein the magnetic field properties, particle size, cluster size, and cluster geometry were varied. Furthermore, the model clarifies how the cluster configuration, cluster alignment, magnitude of the field gradient, and the field repetition rate play a role in the particle disaggregation process. The simulation model will be very useful for further in silico studies on magnetic particle dynamics in biotechnological tools. PMID:24827250

  11. Dynamics of nanoscale ripple relaxation on alloy surfaces.

    PubMed

    Ramasubramaniam, Ashwin; Shenoy, Vivek B

    2008-02-01

    As an alloy surface evolves under capillary forces, differing mobilities of the individual components can lead to kinetic alloy decomposition at the surface. In this paper, we address the relaxation of nanoscale sinusoidal ripples on alloy surfaces by considering the effects of both surface and bulk diffusion. In the absence of bulk diffusion, we derive exact analytical expressions for relaxation rates and identify two natural time scales that govern the relaxation dynamics. Bulk diffusion is shown to reduce kinetic surface segregation and enhance relaxation rates, owing to intermixing near the surface. Our results provide a quantitative framework for the interpretation of relaxation experiments on alloy surfaces. PMID:18352033

  12. Temperature dependent droplet impact dynamics on flat and textured surfaces

    SciTech Connect

    Azar Alizadeh; Vaibhav Bahadur; Sheng Zhong; Wen Shang; Ri Li; James Ruud; Masako Yamada; Liehi Ge; Ali Dhinojwala; Manohar S Sohal

    2012-03-01

    Droplet impact dynamics determines the performance of surfaces used in many applications such as anti-icing, condensation, boiling and heat transfer. We study impact dynamics of water droplets on surfaces with chemistry/texture ranging from hydrophilic to superhydrophobic and across a temperature range spanning below freezing to near boiling conditions. Droplet retraction shows very strong temperature dependence especially for hydrophilic surfaces; it is seen that lower substrate temperatures lead to lesser retraction. Physics-based analyses show that the increased viscosity associated with lower temperatures can explain the decreased retraction. The present findings serve to guide further studies of dynamic fluid-structure interaction at various temperatures.

  13. Real time chemical dynamics at surfaces

    NASA Astrophysics Data System (ADS)

    Bonn, M.; Kleyn, A. W.; Kroes, G. J.

    2002-03-01

    It is a major goal in surface science to make movies of molecules on surfaces, in which the reaction of the molecules on the surface can be followed on a femtosecond time scale, with sub-nanometer resolution. By moving the actors (the molecules) to precisely determined positions on the stage (the surface) at some well-defined moment in time, and subsequently making a space- and time-resolved documentary of what happens next, we would be able to understand the reactive interactions between molecules on surfaces in the greatest possible detail. This would enable us to set the stage and bring together the actors in such a way as to produce the chemical outcomes our society needs, by improving existing catalysts and designing novel catalysts, and by engineering novel reactions on surfaces. Any future director of such movies needs to know which techniques (i.e., which theoretical and experimental methods) hold promise for movie making, what has been done with these techniques, and what can be done with appropriate extensions. The methods we discuss are: (i) the time-dependent wave packet method, which is a theoretical method for simulating molecule-surface reactions with sub-nanometer resolution on a femtosecond time scale, (ii) molecular beam experiments, which allow detailed investigation of the molecule-surface interaction at a molecular level, and (iii) time-resolved laser pump-probe experiments, which allow reactions to be studied with femtosecond resolution. In particular, we discuss (i) theoretical studies of the dissociation reaction of hydrogen on metal surfaces, the reactive system presently understood at the greatest level of detail, (ii) the reactive and non-reactive scattering of heavy diatomics (NO,CO) from metal surfaces, and (iii) the competition between reaction of coadsorbed CO with O and desorption of CO, again on a metal surface. We examine possibilities to extend these methods to make movies at the desired level of detail. We also discuss which

  14. Double transmission-mediums based geometric phase analysis for determining the two surface profiles of transparent object

    NASA Astrophysics Data System (ADS)

    Liu, Shuli; Liu, Zhanwei

    2016-05-01

    The accurate measurement for the surface profiles of transparent object is of significance for quality control in optical devices and precision instruments. Here, a double transmission-mediums based geometric phase analysis method has been developed to evaluate both the upper and lower surface profiles of transparent object. To do this, the tested transparent object is placed above a preprinted lattice pattern. When viewed from above with a CCD camera, any slope variations of the surfaces will lead to distortions of the transmission-lattice patterns. And when changing one side of object's contact medium, the lattice virtual image with modulated phase is distorted once again. Combined with the derived relationship between phase variations of transmission-lattice patterns and out-of-plane heights of two surfaces, the double-sided surface profiles of transparent object can be reconstructed successfully. With this, the technique, which is verified experimentally, is demonstrated to be a feasible and reliable method. The advantage of this method is that it simplifies the setup and allows a fast estimation of the geometry of a transparent specimen. The double-sided profiles can be decoupled easily according to the big difference of refractive indexes between contact mediums. And the calculation accuracy can be guaranteed by the weighted average from four directions.

  15. Rayleigh and Wood anomalies in the diffraction of acoustic waves from the periodically corrugated surface of an elastic medium

    NASA Astrophysics Data System (ADS)

    Maradudin, A. A.; Simonsen, I.

    2016-05-01

    By the use of the Rayleigh method we have calculated the angular dependence of the reflectivity and the efficiencies of several other diffracted orders when the periodically corrugated surface of an isotropic elastic medium is illuminated by a volume acoustic wave of shear horizontal polarization. These dependencies display the signatures of Rayleigh and Wood anomalies, usually associated with the diffraction of light from a metallic grating. The Rayleigh anomalies occur at angles of incidence at which a diffracted order appears or disappears; the Wood anomalies here are caused by the excitation of the shear horizontal surface acoustic waves supported by the periodically corrugated surface of an isotropic elastic medium. The dispersion curves of these waves in both the nonradiative and radiative regions of the frequency-wavenumber plane are calculated, and used in predicting the angles of incidence at which the Wood anomalies are expected to occur.

  16. Numerical implementation of mathematical model of the dynamics of a porous medium on supercomputers of cluster architecture

    NASA Astrophysics Data System (ADS)

    Sadovskaya, O. V.; Sadovskii, V. M.

    2015-10-01

    The parallel computational algorithm for analysis of the processes of elastic-plastic deformation of a porous medium under the action of external dynamic loads is developed. This algorithm is based on the mathematical model taking into account threshold nature of change in the strength of a material under the collapse of pores. The algorithm is implemented in Fortran by means of functions of the MPI library. The parallel program system has been tested on clusters in computations of the propagation of plane longitudinal shock waves of the compression and in computations of the expansion of a cylindrical cavity in an infinite porous medium. The comparison of numerical results and exact solutions has shown their good qualitative and quantitative correspondence. Using the obtained algorithm, the process of propagation of elastic-plastic waves of the compression in a homogenous porous medium, accompanied by the deformation of a skeleton and the collapse of pores, is analyzed.

  17. Principal velocity surfaces in stellar dynamics

    NASA Astrophysics Data System (ADS)

    Lynden-Bell, D.

    2016-05-01

    Recent work by An and Evans has revived interest in the coordinate surfaces that lie along the principal axes of the stress tensor. Here we complete our list of non-axially symmetric systems with local integrals and prove that those principal velocity surfaces exist for all systems with three local integrals. We then demonstrate how systems in non-separable potentials evade the Eddington-An theorem by having distribution functions that lack perfect reflection symmetry in a meridional velocity component, and discuss other consequences of this remarkable theorem.

  18. Effects of storage medium and UV photofunctionalization on time-related changes of titanium surface characteristics and biocompatibility.

    PubMed

    Shen, Jian-Wei; Chen, Yun; Yang, Guo-Li; Wang, Xiao-Xiang; He, Fu-Ming; Wang, Hui-Ming

    2016-07-01

    Storage in aqueous solution and ultraviolet (UV) photofunctionalization are two applicable methods to overcome the biological aging and increase the bioactivity of titanium. As information regarding the combined effects of storage medium and UV photofunctionalization has never been found in published literatures, this study focused on whether appropriate storage methods and UV photofunctionalization have synergistic effects on the biological properties of aged titanium surfaces. Titanium plates and discs were sandblasted and acid etched and then further prepared in five different modes as using different storage mediums (air or dH2 O) for 4 weeks and then with or without UV treatment. The surface characteristics were evaluated with scanning electron microscopy, contact angle measurements, and X-ray photoelectron spectroscopy. MC3T3-E1 cells were cultured on the surfaces, and cellular morphology, proliferation, alkaline phosphatase activity, and osteocalcin release were evaluated. The results showed that nanostructures were observed on water-stored titanium surfaces with a size of about 15 × 20 nm(2) . UV treatment was effective to remove the hydrocarbon contamination on titanium surfaces stored in either air or water. UV photofunctionalization further enhanced the already increased bioactivity of modSLA on initial cell attachment, proliferation, alkaline phosphatase activity, and osteocalcin release. Overall, UV photofunctionalization was effective in further enhancing the already increased bioactivity by using dH2 O as storage medium, and the effect of UV treatment was much more overwhelming than that of the storage medium. © 2015 Wiley Periodicals, Inc. J Biomed Mater Res Part B: Appl Biomater, 104B: 932-940, 2016. PMID:25969950

  19. Dynamic behavior of interfacila water at the silica surface

    SciTech Connect

    Argyris, Dr. Dimitrios; Cole, David R; Striolo, Alberto

    2009-01-01

    Molecular dynamics simulations were employed to study the dynamics properties of water at the silica-liquid interface at ambient temperature. Three different degrees of hydroxylation of a crystalline silica surface were used. To assess the water dynamic properties we calculated the residence probability and in-plane mean square displacement as a function of distance from the surface. The data indicate that water molecules at the fully hydroxylated surface remain longer, on average, in the interfacial region than in the other cases. By assessing the dynamics of molecular dipole moment and hydrogen-hydrogen vector an anisotropic reorientation was discovered for interfacial water in contact with any of the surfaces considered. However, the features of the anisotropic reorientation observed for water molecules depend strongly on the relative orientation of interfacial water molecules and their interactions with surface hydroxyl groups. On the partially hydroxylated surface, where water molecules with hydrogen-down and hydrogen-up orientation are both found, those water molecules associated with surface hydroxyl groups remain at the adsorbed locations longer and reorient slower than the other water molecules. A number of equilibrium properties, including density profiles, hydrogen bond networks, charge densities, and dipole moment densities are also reported to explain the dynamics results.

  20. Assessment of dynamic surface leaching of monolithic surface road materials.

    PubMed

    Paulus, Hélène; Schick, Joachim; Poirier, Jean-Eric

    2016-07-01

    Construction materials have to satisfy, among others, health and environment requirements. To check the environmental compatibility of road construction materials, release of hazardous substances into water must be assessed. Literature mostly describes the leaching behaviour of recycled aggregates for potential use in base or sub-base layers of roads. But little is known about the release of soluble substances by materials mixed with binders and compacted for intended use on road surface. In the present study, we thus performed a diffusion test with sequential renewal of water during a 64 day period according to CEN/TS 16637-2 specifications, on asphalt concretes and hydraulically bound monoliths, two common surface road materials. It is shown that release of dangerous substances is limited in these hydrodynamic conditions. It was particularly true for asphalt concrete leachates where no metallic trace element, sulphate, chloride or fluoride ion could be quantified. This is because of the low hydraulic conductivity and the low polarity of the petroleum hydrocarbon binder of these specimens. For hydraulically bound materials around 20,000 mg/m(2) of sulphate diffused from the monoliths. It is one order of magnitude higher than chloride diffusion and two orders of magnitude higher than fluoride release. No metallic trace element, except small quantities of copper in the last eluate could be quantified. No adverse effect is to be expected for human and environmental health from the leachates of these compacted surface road construction materials, because all the measured parameters were below EU (Council Directive 98/83/EC) or WHO guidelines for drinking water standards. PMID:27039367

  1. Invariant algebraic surfaces for a virus dynamics

    NASA Astrophysics Data System (ADS)

    Valls, Claudia

    2015-08-01

    In this paper, we provide a complete classification of the invariant algebraic surfaces and of the rational first integrals for a well-known virus system. In the proofs, we use the weight-homogeneous polynomials and the method of characteristic curves for solving linear partial differential equations.

  2. Using surface deformation to image reservoir dynamics

    SciTech Connect

    Vasco, D.W.; Karasaki, K.; Doughty, C.

    2000-02-01

    The inversion of surface deformation data such as tilt, displacement, or strain provides a noninvasive method for monitoring subsurface volume change. Reservoir volume change is related directly to processes such as pressure variations induced by injection and withdrawal. The inversion procedure is illustrated by an application to tiltmeter data from the Hijiori test site in Japan. An inversion of surface tilt data allows one to image flow processes in a fractured granodiorite. Approximately 650 barrels of water, injected 2 km below the surface, produces a peak surface tilt of the order of 0.8 microradians. The authors find that the pattern of volume change in the granodiorite is very asymmetrical, elongated in a north-northwesterly direction, and the maximum volume change is offset by more than 0.7 km to the east of the pumping well. The inversion of a suite of leveling data from the Wilmington oil field in Long Beach, California, images large-scale reservoir volume changes in 12 one- to two-year increments from 1976 to 1996. The influence of various production strategies is seen in the reservoir volume changes. In particular, a steam flood in fault block 2 in the northwest portion of the field produced a sudden decrease in reservoir volume.

  3. Bubble Dynamics on a Heated Surface

    NASA Technical Reports Server (NTRS)

    Kassemi, Mohammad; Rashidnia, Nasser

    1996-01-01

    In this work, we study the combined thermocapillary and natural convective flow generated by a bubble on a heated solid surface. The interaction between gas and vapor bubbles with the surrounding fluid is of interest for both space and ground-based processing. On earth, the volumetric forces are dominant, especially, in apparatuses with large volume to surface ratio. But in the reduced gravity environment of orbiting spacecraft, surface forces become more important and the effects of Marangoni convection are easily unmasked. In order to delineate the roles of the various interacting phenomena, a combined numerical-experimental approach is adopted. The temperature field is visualized using Mach-Zehnder interferometry and the flow field is observed by a laser sheet flow visualization technique. A finite element numerical model is developed which solves the two-dimensional momentum and energy equations and includes the effects of bubble surface deformation. Steady state temperature and velocity fields predicted by the finite element model are in excellent qualitative agreement with the experimental results. A parametric study of the interaction between Marangoni and natural convective flows including conditions pertinent to microgravity space experiments is presented. Numerical simulations clearly indicate that there is a considerable difference between 1-g and low-g temperature and flow fields induced by the bubble.

  4. Optimization of medium composition for erythritol production from glycerol by Yarrowia lipolytica using response surface methodology.

    PubMed

    Rywińska, Anita; Marcinkiewicz, Marta; Cibis, Edmund; Rymowicz, Waldemar

    2015-08-18

    Several factors affecting erythritol production from glycerol by Yarrowia lipolytica Wratislavia K1 strain were examined in batch fermentations. Ammonium sulfate, monopotassium phosphate, and sodium chloride were identified as critical medium components that determine the ratio of polyols produced. The central composite rotatable experimental design was used to optimize medium composition for erythritol production. The concentrations of ammonium sulfate, monopotassium phosphate, and sodium chloride in the optimized medium were 2.25, 0.22, and 26.4 g L(-1), respectively. The C:N ratio was found as 81:1. In the optimized medium with 100 g L(-1) of glycerol the Wratislavia K1 strain produced 46.9 g L(-1) of erythritol, which corresponded to a 0.47 g g(-1) yield and a productivity of 0.85 g L(-1) hr(-1). In the fed-batch mode and medium with the total concentration of glycerol at 300 g L(-1) and C:N ratio at 81:1, 132 g L(-1) of erythritol was produced with 0.44 g g(-1) yield and a productivity of 1.01 g L(-1) hr(-1.) PMID:25387364

  5. Size-Dependent Transition to High-Dimensional Chaotic Dynamics in a Two-Dimensional Excitable Medium

    SciTech Connect

    Strain, M.C.; Greenside, H.S.

    1998-03-01

    The spatiotemporal dynamics of an excitable medium with multiple spiral defects is shown to vary smoothly with system size from short-lived transients for small systems to extensive chaos for large systems. A comparison of the Lyapunov dimension density with the average spiral defect density suggests an average dimension per spiral defect varying between 3 and 7. We discuss some implications of these results for experimental studies of excitable media. {copyright} {ital 1998} {ital The American Physical Society}

  6. Size-Dependent Transition to High-Dimensional Chaotic Dynamics in a Two-Dimensional Excitable Medium

    NASA Astrophysics Data System (ADS)

    Strain, Matthew C.; Greenside, Henry S.

    1998-03-01

    The spatiotemporal dynamics of an excitable medium with multiple spiral defects is shown to vary smoothly with system size from short-lived transients for small systems to extensive chaos for large systems. A comparison of the Lyapunov dimension density with the average spiral defect density suggests an average dimension per spiral defect varying between 3 and 7. We discuss some implications of these results for experimental studies of excitable media.

  7. Structure determination of the CoSi2(111) surface using medium-energy ion scattering

    NASA Astrophysics Data System (ADS)

    Vrijmoeth, J.; Schins, A. G.; van der Veen, J. F.

    1989-08-01

    The surface structure of epitaxially grown CoSi2 crystals on Si(111) has been investigated with use of medium-energy ion scattering. A Co- or a Si-rich surface composition is obtained, depending on the preparation conditions. The structure of the Co-rich surface is shown to be bulklike, i.e., the crystal is terminated by a Si-Co-Si triple layer. The Si-rich surface is found to have, on top of the last Si-Co-Si triple layer, a Si double layer of the same orientation as the CoSi2 bulk lattice. This accounts for the difficulty to grow a 180°-rotated Si film on top of CoSi2(111) by normal molecular-beam-epitaxy techniques. The topmost Co atoms of the Si-rich surface are eightfold coordinated.

  8. About efficiency of identification of materials using spectrum dynamics of medium response under the action of THz radiation

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2009-05-01

    A method, suggested by us earlier for identification of materials with close spectra in terahertz range of frequencies and based on the analysis of medium response spectral lines dynamics, is verified experimentally. The temporal dynamics of spectral lines allows to determine relaxation time of rotational transitions as well. A question about measurement time, that is sufficient for determining of material response characteristic time, is discussed. To demonstrate the efficiency of proposed method, we treat the response of soap and chocolate under the action of terahertz pulse with a few cycles. Our investigation shows that it is possible to identify these materials with high probability.

  9. The Surface Wave Dynamics Experiment (SWADE)

    NASA Technical Reports Server (NTRS)

    Long, S. R.; Oberholtzer, J. D.; Wright, C. W.; Shirk, H. G.

    1988-01-01

    SWADE was developed to study the dynamics of the wave field development in the open ocean with the following specific objectives: (1) to understand the development of the wave directional spectrum under various conditions; (2) to determine the effect of waves on the air/sea transfers of momentum, heat, and mass; (3) to determine breaking distributions as a function of sea state, wind, and boundary stability; and (4) to provide data and analyses for ERS-1 validation. The experiment is designed for the winter of 1990 to 1991. Four buoys will be deployed for 6 months starting October 1990 and ending March 1991. During that time period, three intensive periods of 2 weeks duration each will be selected for frequent aircraft flights for wave data collection to satisfy scientific studies, as well as ERS-1 validation needs.

  10. Dynamics of Spreading on Micro-Textured Surfaces

    NASA Astrophysics Data System (ADS)

    Mohammad Karim, Alireza; Rothstein, Jonathan; Kavehpour, Pirouz

    2015-11-01

    Ultrahydrophobic surfaces, due to their large water-repellency characteristic, have a vast variety of applications in technology and nature, such as de-icing of airplane wings, efficiency increase of power plants, and efficiency of pesticides on plants, etc. The significance of ultrahydrophobic surfaces requires enhancing the knowledge on the spreading dynamics on such surfaces. The best way to produce an ultrahydrophobic surface is by patterning of smooth hydrophobic surfaces with micron sized posts. In this research, the micro-textured surfaces have been fabricated by patterning several different sizes of micro-textured posts on Teflon plates. The experimental study has been performed using forced spreading with Tensiometer to obtain the dependencw of dynamic contact angle to the contact line velocity to describe the spreading dynamics of Newtonian liquids on the micro-textured surfaces. The effect of the geometrical descriptions of the micro-posts along with the physical properties of liquids on the spreading dynamics on micro-textured Teflon plates have been also studied.

  11. Surface identification, meshing and analysis during large molecular dynamics simulations

    NASA Astrophysics Data System (ADS)

    Dupuy, Laurent M.; Rudd, Robert E.

    2006-03-01

    Techniques are presented for the identification and analysis of surfaces and interfaces in atomistic simulations of solids. Atomistic and other particle-based simulations have no inherent notion of a surface, only atomic positions and interactions. The algorithms we develop here provide an unambiguous means to determine which atoms constitute the surface, and the list of surface atoms and a tessellation (meshing) of the surface are determined simultaneously. The tessellation is then used to calculate various surface integrals such as volume, area and shape (multiple moment). The principle of surface identification and tessellation is closely related to that used in the generation of the r-reduced surface, a step in the visualization of molecular surfaces used in biology. The algorithms have been implemented and demonstrated to run automatically (on the fly) in a large-scale parallel molecular dynamics (MD) code on a supercomputer. We demonstrate the validity of the method in three applications in which the surfaces and interfaces evolve: void surfaces in ductile fracture, the surface morphology due to significant plastic deformation of a nanoscale metal plate, and the interfaces (grain boundaries) and void surfaces in a nanoscale polycrystalline system undergoing ductile failure. The technique is found to be quite robust, even when the topology of the surfaces changes as in the case of void coalescence where two surfaces merge into one. It is found to add negligible computational overhead to an MD code.

  12. Effects of a rough boundary surface on polarization of the scattered field from an inhomogeneous medium

    NASA Technical Reports Server (NTRS)

    Fung, A. K.; Eom, H. J.

    1983-01-01

    A combination of the standard Kirchhoff method for rough surface scattering with the Rayleigh phase function radiative transfer method for volume scattering is employed in the present study of the effect of surface roughness on the polarization of the scattered field. It is found that for pure surface scattering, the polarization ratio between zero and 20 deg incidence angles is sensitive to surface roughness change. When both surface and volume scattering are present, however, copolarization nulls by colatitude or degree of polarization at zero to 15 deg incidence angle, and copolarization or crosspolarization nulls by longitude at large incidence angles, are better indicators of surface roughness changes. It is noted that degree of polarization and copolarization nulls by colatitude vary monotonously with incidence angle, while in combined surface and volume scattering these have, respectively, a minimum and a maximum. This characteristic allows the separation of combined surface and volume scattering from pure surface or volume scattering.

  13. Pseudo-viscosity analysis of dynamic compactions of multilayer copper powder medium by punch impact

    SciTech Connect

    Tokushima, Koji; Sano, Yukio

    1995-08-01

    In this paper, the compaction of a multilayer copper powder medium by punch impact is analyzed by a pseudo-viscosity method: equal thickness layers of lower (L) and higher (H) initial densities are arranged alternately. In the early stage of compaction, reflection and transmission of induced shock and elastic waves occur at the interfaces in the medium. As a result, the L layers are selectively compressed at first until the density distribution in the medium is uniform. Compaction then continues by the shock waves propagating through the medium. The final mean is influenced greatly by die wall friction. The influence is less in the L-H type arrangement where an L layer is in direct contact with the punch than in the H-L type arrangement for a given number of layers, because energy loss due to wall friction is smaller in the former. Separation of the punch from the medium and subsequent reimpingement was found to occur in some of the H-L type compactions.

  14. Optimisation of synthetic medium composition for levorin biosynthesis by Streptomyces levoris 99/23 and investigation of its accumulation dynamics using mathematical modelling methods.

    PubMed

    Stanchev, Veselin S; Kozhuharova, Lubka Y; Zhekova, Boriana Y; Gochev, Velizar K

    2010-01-01

    The composition of a synthetic culture medium for levorin biosynthesis by Streptomyces levoris 99/23 was optimised using mathematical modelling methods. The optimal concentrations of the medium components were established by means of an optimum composition design at three factor variation levels. An adequate regression model was obtained. Levorin biosynthesis by Streptomyces levoris 99/23 in the optimised synthetic medium was over 38% higher than in the initial medium. The antibiotic biosynthesis dynamics in the optimised culture medium was studied by means of a non-linear differential equation system. The resultant model was valid. PMID:21033581

  15. Ab inito molecular-dynamics study of EC decomposition process on Li2O2 surfaces

    NASA Astrophysics Data System (ADS)

    Ando, Yasunobu; Ikeshoji, Tamio; Otani, Minoru

    2015-03-01

    We have simulated electrochemical reactions of the EC molecule decomposition on Li2O2 substrate by ab initio molecular dynamics combined with the effective screening medium method. EC molecules adsorb onto the peroxide spontaneously. We find through the analysis of density of states that the adsorption state is stabilized by hybridization of the sp2 orbital and the surface states of the Li2O2. After adsorption, EC ring opens, which leads to the decomposition of the peroxide and the formation of a carboxy group. This kind of alkyl carbonates formed on the Li2O2 substrate was found in experiments actually Nanosystem Research Institute, AIST; ESICB, Kyoto University

  16. Land Surface Microwave Emissivity Dynamics: Observations, Analysis and Modeling

    NASA Technical Reports Server (NTRS)

    Tian, Yudong; Peters-Lidard, Christa D.; Harrison, Kenneth W.; Kumar, Sujay; Ringerud, Sarah

    2014-01-01

    Land surface microwave emissivity affects remote sensing of both the atmosphere and the land surface. The dynamical behavior of microwave emissivity over a very diverse sample of land surface types is studied. With seven years of satellite measurements from AMSR-E, we identified various dynamical regimes of the land surface emission. In addition, we used two radiative transfer models (RTMs), the Community Radiative Transfer Model (CRTM) and the Community Microwave Emission Modeling Platform (CMEM), to simulate land surface emissivity dynamics. With both CRTM and CMEM coupled to NASA's Land Information System, global-scale land surface microwave emissivities were simulated for five years, and evaluated against AMSR-E observations. It is found that both models have successes and failures over various types of land surfaces. Among them, the desert shows the most consistent underestimates (by approx. 70-80%), due to limitations of the physical models used, and requires a revision in both systems. Other snow-free surface types exhibit various degrees of success and it is expected that parameter tuning can improve their performances.

  17. Response surface optimization of the critical medium components for carbonyl reductase production by Candida viswanathii MTCC 5158.

    PubMed

    Soni, Pankaj; Singh, Manpreet; Kamble, Ashwini L; Banerjee, Uttam C

    2007-03-01

    Culture conditions were optimized for the growth and carbonyl reductase production by a novel yeast strain Candida viswanathii. Response surface methodology was applied for the critical medium components (initial pH, mannitol, yeast extract and calcium chloride) identified earlier by one-factor-at-a-time approach. Central composite design was used for the optimization studies. Using this methodology, the optimal values for the concentration of mannitol, initial pH, yeast extract and calcium chloride were 1.9, 7.5, 1.6 and 4, respectively. This medium was projected to produce, theoretically, growth having an optical density of 1.1 (600 nm) and an enzyme activity of 81.5 U/ml. Using this optimized medium, an experimental growth of 1.1 OD (600 nm) and enzyme activity 80.9 U/ml verified the applied methodology. This approach for medium optimization led to an enhancement of the growth and enzyme activity by 1.3 and 2.3 times higher, respectively, as compared to the unoptimized media. PMID:16697185

  18. Removal of bisphenol A from aqueous medium using molecularly surface imprinted microbeads.

    PubMed

    Bayramoglu, Gulay; Arica, M Yakup; Liman, Gorkem; Celikbicak, Omur; Salih, Bekir

    2016-05-01

    The aim of this study is to prepare bisphenol A (BPA) imprinted polymers, which can be used for the selective removal of BPA from aqueous medium. The BPA-imprinted (MIP) and non-imprinted (NIP) microbeads were synthesized, and characterized by Zeta-sizer, FTIR, SEM and BET method. Bisphenol A was determined in solutions using liquid chromatography-mass spectroscopy (LC-MS). The effect of initial concentration of BPA, the adsorption rate and the pH of the medium on the capacity of BPA-imprinting polymer were studied. Adsorption capacity of BPA was affected by the amount of the incorporated functional monomer in the polymer network. BPA adsorption capacity of MIP-3 and NIP microbeads from aqueous medium was estimated as 76.7 and 59.9 mg g(-1), respectively. The binding efficiencies of BPA-MIP-3 microbeads for different phenolic compounds (i.e., BPA with p-toluidine, 4-aminophenol or 2-naphthol) were explored at binary solutions, and the binding capacities of BPA-imprinted microbeads were found to be 2.79 × 10(-1), 2.39 × 10(-1), 7.59 × 10(-2) and 5.48 × 10(-2) mmol g(-1) microbeads, respectively. The satisfactory results demonstrated that the obtained BPA-MIP microbeads showed an appreciable binding specificity toward BPA than similar structural compounds in the aqueous medium. Moreover, the reusability of BPA-MIP-3 microbeads was tested for several times and no significant loss in adsorption capacity was observed. Finally, the binary and multi-component systems results show that MIP-3 microbeads have special recognition selectivity and excellent binding affinity for template molecule "BPA". PMID:26907596

  19. Optimization of Fermentation Medium for Extracellular Lipase Production from Aspergillus niger Using Response Surface Methodology.

    PubMed

    Jia, Jia; Yang, Xiaofeng; Wu, Zhiliang; Zhang, Qian; Lin, Zhi; Guo, Hongtao; Lin, Carol Sze Ki; Wang, Jianying; Wang, Yunshan

    2015-01-01

    Lipase produced by Aspergillus niger is widely used in various industries. In this study, extracellular lipase production from an industrial producing strain of A. niger was improved by medium optimization. The secondary carbon source, nitrogen source, and lipid were found to be the three most influential factors for lipase production by single-factor experiments. According to the statistical approach, the optimum values of three most influential parameters were determined: 10.5 g/L corn starch, 35.4 g/L soybean meal, and 10.9 g/L soybean oil. Using this optimum medium, the best lipase activity was obtained at 2,171 U/mL, which was 16.4% higher than using the initial medium. All these results confirmed the validity of the model. Furthermore, results of the Box-Behnken Design and quadratic models analysis indicated that the carbon to nitrogen (C/N) ratio significantly influenced the enzyme production, which also suggested that more attention should be paid to the C/N ratio for the optimization of enzyme production. PMID:26366414

  20. Optimization of Fermentation Medium for Extracellular Lipase Production from Aspergillus niger Using Response Surface Methodology

    PubMed Central

    Jia, Jia; Yang, Xiaofeng; Wu, Zhiliang; Zhang, Qian; Lin, Zhi; Guo, Hongtao; Lin, Carol Sze Ki; Wang, Jianying; Wang, Yunshan

    2015-01-01

    Lipase produced by Aspergillus niger is widely used in various industries. In this study, extracellular lipase production from an industrial producing strain of A. niger was improved by medium optimization. The secondary carbon source, nitrogen source, and lipid were found to be the three most influential factors for lipase production by single-factor experiments. According to the statistical approach, the optimum values of three most influential parameters were determined: 10.5 g/L corn starch, 35.4 g/L soybean meal, and 10.9 g/L soybean oil. Using this optimum medium, the best lipase activity was obtained at 2,171 U/mL, which was 16.4% higher than using the initial medium. All these results confirmed the validity of the model. Furthermore, results of the Box-Behnken Design and quadratic models analysis indicated that the carbon to nitrogen (C/N) ratio significantly influenced the enzyme production, which also suggested that more attention should be paid to the C/N ratio for the optimization of enzyme production. PMID:26366414

  1. Dynamics of slow light and light storage in a Doppler-broadened electromagnetically-induced-transparency medium: A numerical approach

    NASA Astrophysics Data System (ADS)

    Su, Shih-Wei; Chen, Yi-Hsin; Gou, Shih-Chuan; Horng, Tzyy-Leng; Yu, Ite A.

    2011-01-01

    We present a numerical scheme to study the dynamics of slow light and light storage in an electromagnetically-induced-transparency (EIT) medium at finite temperatures. Allowing for the motional coupling, we derive a set of coupled Schrödinger equations describing a boosted closed three-level EIT system according to the principle of Galilean relativity. The dynamics of a uniformly moving EIT medium can thus be determined by numerically integrating the coupled Schrödinger equations for atoms plus one ancillary Maxwell-Schrödinger equation for the probe pulse. The central idea of this work rests on the assumption that the loss of ground-state coherence at finite temperatures can be ascribed to the incoherent superposition of density matrices representing the EIT systems with various velocities. Close agreements are demonstrated in comparing the numerical results with the experimental data for both slow light and light storage. In particular, the distinct characters featuring the decay of ground-state coherence can be well verified for slow light and light storage. This warrants that the current scheme can be applied to determine the decaying profile of the ground-state coherence as well as the temperature of the EIT medium.

  2. Molecular dynamics simulation of annealed ZnO surfaces

    SciTech Connect

    Min, Tjun Kit; Yoon, Tiem Leong; Lim, Thong Leng

    2015-04-24

    The effect of thermally annealing a slab of wurtzite ZnO, terminated by two surfaces, (0001) (which is oxygen-terminated) and (0001{sup ¯}) (which is Zn-terminated), is investigated via molecular dynamics simulation by using reactive force field (ReaxFF). We found that upon heating beyond a threshold temperature of ∼700 K, surface oxygen atoms begin to sublimate from the (0001) surface. The ratio of oxygen leaving the surface at a given temperature increases as the heating temperature increases. A range of phenomena occurring at the atomic level on the (0001) surface has also been explored, such as formation of oxygen dimers on the surface and evolution of partial charge distribution in the slab during the annealing process. It was found that the partial charge distribution as a function of the depth from the surface undergoes a qualitative change when the annealing temperature is above the threshold temperature.

  3. Molecular dynamics studies of interfacial water at the alumina surface.

    SciTech Connect

    Argyris, Dr. Dimitrios; Ho, Thomas; Cole, David

    2011-01-01

    Interfacial water properties at the alumina surface were investigated via all-atom equilibrium molecular dynamics simulations at ambient temperature. Al-terminated and OH-terminated alumina surfaces were considered to assess the structural and dynamic behavior of the first few hydration layers in contact with the substrates. Density profiles suggest water layering up to {approx}10 {angstrom} from the solid substrate. Planar density distribution data indicate that water molecules in the first interfacial layer are organized in well-defined patterns dictated by the atomic terminations of the alumina surface. Interfacial water exhibits preferential orientation and delayed dynamics compared to bulk water. Water exhibits bulk-like behavior at distances greater than {approx}10 {angstrom} from the substrate. The formation of an extended hydrogen bond network within the first few hydration layers illustrates the significance of water?water interactions on the structural properties at the interface.

  4. Ultrafast exciton dynamics at molecular surfaces

    NASA Astrophysics Data System (ADS)

    Monahan, Nicholas R.

    Further improvements to device performance are necessary to make solar energy conversion a compelling alternative to fossil fuels. Singlet exciton fission and charge separation are two processes that can heavily influence the power conversion efficiency of a solar cell. During exciton fission one singlet excitation converts into two triplet excitons, potentially doubling the photocurrent generated by higher energy photons. There is significant discord over the singlet fission mechanism and of particular interest is whether the process involves a multiexciton intermediate state. I used time-resolved two-photon photoemission to investigate singlet fission in hexacene thin films, a model system with strong electronic coupling. My results indicate that a multiexciton state forms within 40 fs of photoexcitation and loses singlet character on a 280 fs timescale, creating two triplet excitons. This is concordant with the transient absorption spectra of hexacene single crystals and definitively proves that exciton fission in hexacene proceeds through a multiexciton state. This state is likely common to all strongly-coupled systems and my results suggest that a reassessment of the generally-accepted singlet fission mechanism is required. Charge separation is the process of splitting neutral excitons into carriers that occurs at donor-acceptor heterojunctions in organic solar cells. Although this process is essential for device functionality, there are few compelling explanations for why it is highly efficient in certain organic photovoltaic systems. To investigate the charge separation process, I used the model system of charge transfer excitons at hexacene surfaces and time-resolved two-photon photoemission. Charge transfer excitons with sufficient energy spontaneously delocalize, growing from about 14 nm to over 50 nm within 200 fs. Entropy drives this delocalization, as the density of states within the Coulomb potential increases significantly with energy. This charge

  5. Origins of Irish-Medium Education: The Dynamic Core of Language Revitalisation in Northern Ireland

    ERIC Educational Resources Information Center

    O Baoill, Donall P.

    2007-01-01

    The establishment and growth of Irish-medium education has been central to the revitalisation of the language in Northern Ireland in recent years. Historically, the struggle by the minority of Irish speakers in the region to provide all-Irish schools has been both the goal and the engine of renewal and expansion during a period of community and…

  6. Towards a Dynamic Conceptual Framework for English-Medium Education in Multilingual University Settings

    ERIC Educational Resources Information Center

    Dafouz, Emma; Smit, Ute

    2016-01-01

    At a time of increasing internationalization in tertiary education, English-Medium Education in Multilingual University Settings (EMEMUS) has become a common practice. While there is already ample research describing this phenomenon at a local level (Smit and Dafouz 2012a), the theoretical side needs to be elaborated. This article thus aims to…

  7. Structural and dynamical properties of water on chemically modified surfaces: The role of the instantaneous surface

    NASA Astrophysics Data System (ADS)

    Bekele, Selemon; Tsige, Mesfin

    Surfaces of polymers such as atactic polystyrene (aPS) represent very good model systems for amorphous material surfaces. Such polymer surfaces are usually modified either chemically or physically for a wide range of applications that include friction, lubrication and adhesion. It is thus quite important to understand the structural and dynamical properties of liquids that come in contact with them to achieve the desired functional properties. Using molecular dynamics (MD) simulations, we investigate the structural and dynamical properties of water molecules in a slab of water in contact with atactic polystyrene surfaces of varying polarity. We find that the density of water molecules and the number distribution of hydrogen bonds as a function of distance relative to an instantaneous surface exhibit a structure indicative of a layering of water molecules near the water/PS interface. For the dynamics, we use time correlation functions of hydrogen bonds and the incoherent structure function for the water molecules. Our results indicate that the polarity of the surface dramatically affects the dynamics of the interfacial water molecules with the dynamics slowing down with increasing polarity. This work was supported by NSF Grant DMR1410290.

  8. Geostrophic dynamics at surfaces in the atmosphere and ocean

    NASA Astrophysics Data System (ADS)

    Tulloch, Ross

    Observed dynamics near bounding upper surfaces in the atmosphere and ocean are interpreted in terms of quasi-geostrophic theory. The quasi-geostrophic equations consist of advection of linearized potential vorticity coupled with advection of temperature at the upper and lower bounding surfaces. We show that the standard vertical finite difference formulation of 3D quasi-geostrophic flow accurately represents the flow only down to a critical horizontal scale that decreases with vertical grid spacing. To overcome this constraint, we derive a surface-modal formulation which accurately and efficiently captures both the surface dynamics due to temperature anomalies on the upper and lower boundaries, and the interior dynamics due to potential vorticity anomalies, without the need for high vertical resolution. In the atmosphere, the horizontal wavenumber spectra of wind and temperature near the tropopause have a steep -3 slope at synoptic scales and a shallow -5/3 slope at mesoscales, with a smooth transition between the two regimes from 800km to 200km. We demonstrate that when the surface temperature anomalies are resolved, quasi-geostrophic flow driven by baroclinic instability exhibits such a transition near the tropopause. The horizontal scale of transition between -3 and -5/3 slopes depends on the relative magnitudes of the mean surface temperature gradient and the mean potential vorticity gradient. In the ocean, sea surface height anomalies measured by satellite altimetry exhibit shallower spectral slopes than quasi-geostrophic theory predicts, and faster than expected westward phase propagation of sea surface height in the midlatitudes. We argue that, in some regions, the shallow spectral slopes are due to surface quasi-geostrophic dynamics, and that the westward phase propagation in the midlatitudes is indicative of a transition from a linear Rossby wave regime in the tropics to a nonlinear turbulent regime in the midlatitudes.

  9. Ionization dynamics of water dimer on ice surface

    NASA Astrophysics Data System (ADS)

    Tachikawa, Hiroto

    2016-05-01

    The solid surface provides an effective two-dimensional reaction field because the surface increases the encounter probability of bi-molecular collision reactions. Also, the solid surface stabilizes a reaction intermediate because the excess energy generated by the reaction dissipates into the bath modes of surface. The ice surface in the universe is one of the two dimensional reaction fields. However, it is still unknown how the ice surface affects to the reaction mechanism. In the present study, to elucidate the specific property of the ice surface reaction, ionization dynamics of water dimer adsorbed on the ice surface was theoretically investigated by means of direct ab-initio molecular dynamics (AIMD) method combined with ONIOM (our own n-layered integrated molecular orbital and molecular mechanics) technique, and the result was compared with that of gas phase reaction. It was found that a proton is transferred from H2O+ to H2O within the dimer and the intermediate complex H3O+(OH) is formed in both cases. However, the dynamic features were different from each other. The reaction rate of the proton transfer on the ice surface was three times faster than that in the gas phase. The intermediate complex H3O+(OH) was easily dissociated to H3O+ and OH radical on the ice surface, and the lifetime of the complex was significantly shorter than that of gas phase (100 fs vs. infinite). The reason why the ice surface accelerates the reaction was discussed in the present study.

  10. AschFlow - A dynamic landslide run-out model for medium scale hazard analysis.

    NASA Astrophysics Data System (ADS)

    Luna, Byron Quan; Blahut, Jan; van Asch, Theo; van Westen, Cees; Kappes, Melanie

    2015-04-01

    Landslides and debris flow hazard assessments require a scale-dependent analysis in order to mitigate damage and other negative consequences at the respective scales of occurrence. Medium or large scale landslide run-out modelling for many possible landslide initiation areas has been a cumbersome task in the past. This arises from the difficulty to precisely define the location and volume of the released mass and from the inability of the run-out models to compute the displacement with a large amount of individual initiation areas (computational exhaustive). Most of the existing physically based run-out models have complications in handling such situations and therefore empirical methods have been used as a practical mean to predict landslides mobility at a medium scale (1:10,000 to 1:50,000). In this context, a simple medium scale numerical model for rapid mass movements in urban and mountainous areas was developed. The deterministic nature of the approach makes it possible to calculate the velocity, height and increase in mass by erosion, resulting in the estimation of various forms of impacts exerted by debris flows at the medium scale The established and implemented model ("AschFlow") is a 2-D one-phase continuum model that simulates, the entrainment, spreading and deposition process of a landslide or debris flow at a medium scale. The flow is thus treated as a single phase material, whose behavior is controlled by rheology (e.g. Voellmy or Bingham). The developed regional model "AschFlow" was applied and evaluated in well documented areas with known past debris flow events.

  11. Measurement of dynamic surface tension by mechanically vibrated sessile droplets.

    PubMed

    Iwata, Shuichi; Yamauchi, Satoko; Yoshitake, Yumiko; Nagumo, Ryo; Mori, Hideki; Kajiya, Tadashi

    2016-04-01

    We developed a novel method for measuring the dynamic surface tension of liquids using mechanically vibrated sessile droplets. Under continuous mechanical vibration, the shape of the deformed droplet was fitted by numerical analysis, taking into account the force balance at the drop surface and the momentum equation. The surface tension was determined by optimizing four parameters: the surface tension, the droplet's height, the radius of the droplet-substrate contact area, and the horizontal symmetrical position of the droplet. The accuracy and repeatability of the proposed method were confirmed using drops of distilled water as well as viscous aqueous glycerol solutions. The vibration frequency had no influence on surface tension in the case of pure liquids. However, for water-soluble surfactant solutions, the dynamic surface tension gradually increased with vibration frequency, which was particularly notable for low surfactant concentrations slightly below the critical micelle concentration. This frequency dependence resulted from the competition of two mechanisms at the drop surface: local surface deformation and surfactant transport towards the newly generated surface. PMID:27131706

  12. Measurement of dynamic surface tension by mechanically vibrated sessile droplets

    NASA Astrophysics Data System (ADS)

    Iwata, Shuichi; Yamauchi, Satoko; Yoshitake, Yumiko; Nagumo, Ryo; Mori, Hideki; Kajiya, Tadashi

    2016-04-01

    We developed a novel method for measuring the dynamic surface tension of liquids using mechanically vibrated sessile droplets. Under continuous mechanical vibration, the shape of the deformed droplet was fitted by numerical analysis, taking into account the force balance at the drop surface and the momentum equation. The surface tension was determined by optimizing four parameters: the surface tension, the droplet's height, the radius of the droplet-substrate contact area, and the horizontal symmetrical position of the droplet. The accuracy and repeatability of the proposed method were confirmed using drops of distilled water as well as viscous aqueous glycerol solutions. The vibration frequency had no influence on surface tension in the case of pure liquids. However, for water-soluble surfactant solutions, the dynamic surface tension gradually increased with vibration frequency, which was particularly notable for low surfactant concentrations slightly below the critical micelle concentration. This frequency dependence resulted from the competition of two mechanisms at the drop surface: local surface deformation and surfactant transport towards the newly generated surface.

  13. Some aspects of two-phase flow, heat transfer and dynamic instabilities in medium and high pressure steam generators

    NASA Astrophysics Data System (ADS)

    Unal, H. C.

    1981-03-01

    Experimental data for void fraction, incipient point of boiling, initial point of net vapor generation, bubble dynamics, dryout, two-phase flow pressure drop and density-wave oscillations were obtained in long, sodium heated steam generator tubes of different geometries for a wide range of operating conditions and at medium and high pressures. These data and data from literature taken in sodium and electrically heated steam generator tubes were correlated. Aspects of two-phase flow, heat transfer and density-wave oscillations in these steam generators disclosed include the distribution factor in small- and medium-size diameter steam generator tubes, the characteristic of the transitions at the incipient point of boiling and initial point of net vapor generation, bubble growth during subcooled nucleate flow boiling, the importance of the equivalent length for dryout in non-uniformly heated steam generator tubes and the mechanisms of density-wave oscillations in once-through steam generator tubes.

  14. Surface detection, meshing and analysis during large molecular dynamics simulations

    SciTech Connect

    Dupuy, L M; Rudd, R E

    2005-08-01

    New techniques are presented for the detection and analysis of surfaces and interfaces in atomistic simulations of solids. Atomistic and other particle-based simulations have no inherent notion of a surface, only atomic positions and interactions. The algorithms we introduce here provide an unambiguous means to determine which atoms constitute the surface, and the list of surface atoms and a tessellation (meshing) of the surface are determined simultaneously. The algorithms have been implemented and demonstrated to run automatically (on the fly) in a large-scale parallel molecular dynamics (MD) code on a supercomputer. We demonstrate the validity of the method in three applications in which the surfaces and interfaces evolve: void surfaces in ductile fracture, the surface morphology due to significant plastic deformation of a nanoscale metal plate, and the interfaces (grain boundaries) and void surfaces in a nanoscale polycrystalline system undergoing ductile failure. The technique is found to be quite robust, even when the topology of the surfaces changes as in the case of void coalescence where two surfaces merge into one. It is found to add negligible computational overhead to an MD code, and is much less expensive than other techniques such as the solvent-accessible surface.

  15. Potential energy surfaces and reaction dynamics of polyatomic molecules

    SciTech Connect

    Chang, Yan-Tyng.

    1991-11-01

    A simple empirical valence bond (EVB) model approach is suggested for constructing global potential energy surfaces for reactions of polyatomic molecular systems. This approach produces smooth and continuous potential surfaces which can be directly utilized in a dynamical study. Two types of reactions are of special interest, the unimolecular dissociation and the unimolecular isomerization. For the first type, the molecular dissociation dynamics of formaldehyde on the ground electronic surface is investigated through classical trajectory calculations on EVB surfaces. The product state distributions and vector correlations obtained from this study suggest very similar behaviors seen in the experiments. The intramolecular hydrogen atom transfer in the formic acid dimer is an example of the isomerization reaction. High level ab initio quantum chemistry calculations are performed to obtain optimized equilibrium and transition state dimer geometries and also the harmonic frequencies.

  16. Nonlinear Actuation Dynamics of Driven Casimir Oscillators with Rough Surfaces

    NASA Astrophysics Data System (ADS)

    Broer, Wijnand; Waalkens, Holger; Svetovoy, Vitaly B.; Knoester, Jasper; Palasantzas, George

    2015-11-01

    At separations below 100 nm, Casimir-Lifshitz forces strongly influence the actuation dynamics of microelectromechanical systems (MEMS) in dry vacuum conditions. For a micron-size plate oscillating near a surface, which mimics a frequently used setup in experiments with MEMS, we show that the roughness of the surfaces significantly influences the qualitative dynamics of the oscillator. Via a combination of analytical and numerical methods, it is shown that surface roughness leads to a clear increase of initial conditions associated with chaotic motion, that eventually lead to stiction between the surfaces. Since stiction leads to a malfunction of MEMS oscillators, our results are of central interest for the design of microdevices. Moreover, stiction is of significance for fundamentally motivated experiments performed with MEMS.

  17. Novel Schiff-base molecules as efficient corrosion inhibitors for mild steel surface in 1 M HCl medium: experimental and theoretical approach.

    PubMed

    Saha, Sourav Kr; Dutta, Alokdut; Ghosh, Pritam; Sukul, Dipankar; Banerjee, Priyabrata

    2016-07-21

    In order to evaluate the effect of the functional group present in the ligand backbone towards corrosion inhibition performances, three Schiff-base molecules namely, (E)-4-((2-(2,4-dinitrophenyl)hydrazono)methyl)pyridine (L(1)), (E)-4-(2-(pyridin-4-ylmethylene)hydrazinyl)benzonitrile (L(2)) and (E)-4-((2-(2,4-dinitrophenyl)hydrazono)methyl)phenol (L(3)) were synthesized and used as corrosion inhibitors on mild steel in 1 M HCl medium. The corrosion inhibition effectiveness of the studied inhibitors was investigated by weight loss and several sophisticated analytical tools such as potentiodynamic polarization and electrochemical impedance spectroscopy measurements. Experimentally obtained results revealed that corrosion inhibition efficiencies followed the sequence: L(3) > L(1) > L(2). Electrochemical findings showed that inhibitors impart high resistance towards charge transfer across the metal-electrolyte interface and behaved as mixed type inhibitors. Scanning electron microscopy (SEM) was also employed to examine the protective film formed on the mild steel surface. The adsorption as well as inhibition ability of the inhibitor molecules on the mild steel surface was investigated by quantum chemical calculation and molecular dynamic (MD) simulation. In quantum chemical calculations, geometry optimized structures of the Schiff-base inhibitors, electron density distribution in HOMO and LUMO and Fukui indices of each atom were employed for their possible mode of interaction with the mild steel surfaces. MD simulations revealed that all the inhibitors molecules adsorbed in parallel orientation with respect to the Fe(110) surface. PMID:27315235

  18. Synergistic using medium-resolution and high-resolution remote sensing imagery to extract impervious surface for Dianci Basin

    NASA Astrophysics Data System (ADS)

    Hong, Liang; Yang, Kun; Deng, Ming; Liu, Cun

    2014-03-01

    The knowledge of impervious surfaces, especially the magnitude, location, geometry, spatial pattern of impervious surfaces, is significant to urban ecosystem studies, including urban hydrology, urban climate, land use planning and resource management.Impervious surface area (ISA) is considered a key indicator of environmental quality and can be used to address complex urban environmental issues, particularly those related to the health of urban watersheds. ISA is also an indicator of non-point source pollution or polluted runoff. Remote sensing offers a consistent framework for representing spatial patterns and rates of urbanization over time through accurate observations of impervious surface area. Most of the existing methods of extracting impervious surface based on remote sensing concentrate on an urban scale, but the rapid and accurate methods of extracting impervious surfaces in a basin scale are nearly nonexistent in China and abroad. In recent years,with the rapid urbanization especially surrounding the Dianchi water body, the impervious surface coverage rate also grows rapidly and results in severe degradation of basin water environment within Dianchi watershed. In this study, we developed an approach to extract impervious surface for Dianci Basin by synergistic using medium-resolution and high-resolution remote sensing imagery. Subpixel percent impervious surfaces at Thematic Mapper (TM) images were mapped using the classification and regression tree(CART) algorithm. Sub-pixel impervious surfaces at 30m resolution were mapped in this study area through regression tree models. The estimated ISA results were evaluated through independent ISA reference data derived from high resolution QuickBird. The results prove the suitability of the approach for a widely automated and mapping of impervious surfaces in a basin scale.

  19. Dynamic focal spots registration algorithm for freeform surface measurement

    NASA Astrophysics Data System (ADS)

    Guo, Wenjiang; Zhao, Liping; Chen, I.-Ming

    2013-06-01

    In a wavefront sensing system, the raw data for surface reconstruction, either the slope matrix or curvature matrix, is obtained through centroiding on the focal spot images. Centroiding is to calculate the first moment within a certain area of interest, which encloses the focal spot. As the distribution of focal spots is correlated to the surface sampling condition, while a uniform rectangular grid is good enough to register all the focal spots of a uniformly sampled near flat surface, the focal spots of aspherical or freeform surfaces have varying shapes and sizes depending on the surface geometry. In this case, the normal registration method is not applicable. This paper proposed a dynamic focal spots registration algorithm to automatically analyze the image, identify and register every focal spot for centroiding at one go. Through experiment on a freeform surface with polynomial coefficients up to 10th order, the feasibility and effectiveness of the proposed algorithm is proved.

  20. Annihilation of craters: Molecular dynamic simulations on a silver surface

    SciTech Connect

    Henriksson, K. O. E.; Nordlund, K.; Keinonen, J.

    2007-12-15

    The ability of silver cluster ions containing 13 atoms to fill in a preexisting crater with a radius of about 28 A ring on a silver (001) target has been investigated using molecular dynamics simulations and the molecular-dynamics-Monte Carlo corrected effective medium potential. The largest lateral distance r between crater and ion was about three times the radius of the preexisting crater, namely, 75 A ring . The results reveal that when r<20 A ring and r>60 A ring the preexisting crater is partially filled in, and for other distances there is a net growth of the crater. The lattice damage created by the cluster ions, the total sputtering yield, the cluster sputtering yield, and simulated transmission electron microscopy images of the irradiated targets are also presented.

  1. Scaling in a Simple Model for Surface Growth in a Random Medium

    NASA Astrophysics Data System (ADS)

    Aharony, Amnon; Stauffer, Dietrich

    Surface growth in random media is usually governed by both the surface tension and the random local forces. Simulations on lattices mimic the former by imposing a maximum gradient m on the surface heights, and the latter by site-dependent random growth probabilities. Here we consider the limit m --> ∞, where the surface grows at the site with minimal random number, independent of its neighbors. The resulting height distribution obeys a simple scaling law, which is destroyed when local surface tension is included. Our model is equivalent to Yee's simplification of the Bak-Sneppen model for the extinction of biological species, where the height represents the number of times a biological species is exchanged.

  2. Sub-nanometer glass surface dynamics induced by illumination.

    PubMed

    Nguyen, Duc; Nienhaus, Lea; Haasch, Richard T; Lyding, Joseph; Gruebele, Martin

    2015-06-21

    Illumination is known to induce stress and morphology changes in opaque glasses. Amorphous silicon carbide (a-SiC) has a smaller bandgap than the crystal. Thus, we were able to excite with 532 nm light a 1 μm amorphous surface layer on a SiC crystal while recording time-lapse movies of glass surface dynamics by scanning tunneling microscopy (STM). Photoexcitation of the a-SiC surface layer through the transparent crystal avoids heating the STM tip. Up to 6 × 10(4) s, long movies of surface dynamics with 40 s time resolution and sub-nanometer spatial resolution were obtained. Clusters of ca. 3-5 glass forming units diameter are seen to cooperatively hop between two states at the surface. Photoexcitation with green laser light recruits immobile clusters to hop, rather than increasing the rate at which already mobile clusters hop. No significant laser heating was observed. Thus, we favor an athermal mechanism whereby electronic excitation of a-SiC directly controls glassy surface dynamics. This mechanism is supported by an exciton migration-relaxation-thermal diffusion model. Individual clusters take ∼1 h to populate states differently after the light intensity has changed. We believe the surrounding matrix rearranges slowly when it is stressed by a change in laser intensity, and clusters serve as a diagnostic. Such cluster hopping and matrix rearrangement could underlie the microscopic mechanism of photoinduced aging of opaque glasses. PMID:26093566

  3. Sub-nanometer glass surface dynamics induced by illumination

    NASA Astrophysics Data System (ADS)

    Nguyen, Duc; Nienhaus, Lea; Haasch, Richard T.; Lyding, Joseph; Gruebele, Martin

    2015-06-01

    Illumination is known to induce stress and morphology changes in opaque glasses. Amorphous silicon carbide (a-SiC) has a smaller bandgap than the crystal. Thus, we were able to excite with 532 nm light a 1 μm amorphous surface layer on a SiC crystal while recording time-lapse movies of glass surface dynamics by scanning tunneling microscopy (STM). Photoexcitation of the a-SiC surface layer through the transparent crystal avoids heating the STM tip. Up to 6 × 104 s, long movies of surface dynamics with 40 s time resolution and sub-nanometer spatial resolution were obtained. Clusters of ca. 3-5 glass forming units diameter are seen to cooperatively hop between two states at the surface. Photoexcitation with green laser light recruits immobile clusters to hop, rather than increasing the rate at which already mobile clusters hop. No significant laser heating was observed. Thus, we favor an athermal mechanism whereby electronic excitation of a-SiC directly controls glassy surface dynamics. This mechanism is supported by an exciton migration-relaxation-thermal diffusion model. Individual clusters take ˜1 h to populate states differently after the light intensity has changed. We believe the surrounding matrix rearranges slowly when it is stressed by a change in laser intensity, and clusters serve as a diagnostic. Such cluster hopping and matrix rearrangement could underlie the microscopic mechanism of photoinduced aging of opaque glasses.

  4. Sub-nanometer glass surface dynamics induced by illumination

    SciTech Connect

    Nguyen, Duc; Nienhaus, Lea; Haasch, Richard T.; Lyding, Joseph; Gruebele, Martin

    2015-06-21

    Illumination is known to induce stress and morphology changes in opaque glasses. Amorphous silicon carbide (a-SiC) has a smaller bandgap than the crystal. Thus, we were able to excite with 532 nm light a 1 μm amorphous surface layer on a SiC crystal while recording time-lapse movies of glass surface dynamics by scanning tunneling microscopy (STM). Photoexcitation of the a-SiC surface layer through the transparent crystal avoids heating the STM tip. Up to 6 × 10{sup 4} s, long movies of surface dynamics with 40 s time resolution and sub-nanometer spatial resolution were obtained. Clusters of ca. 3-5 glass forming units diameter are seen to cooperatively hop between two states at the surface. Photoexcitation with green laser light recruits immobile clusters to hop, rather than increasing the rate at which already mobile clusters hop. No significant laser heating was observed. Thus, we favor an athermal mechanism whereby electronic excitation of a-SiC directly controls glassy surface dynamics. This mechanism is supported by an exciton migration-relaxation-thermal diffusion model. Individual clusters take ∼1 h to populate states differently after the light intensity has changed. We believe the surrounding matrix rearranges slowly when it is stressed by a change in laser intensity, and clusters serve as a diagnostic. Such cluster hopping and matrix rearrangement could underlie the microscopic mechanism of photoinduced aging of opaque glasses.

  5. The Surface-Associated and Secreted MopE Protein of Methylococcus capsulatus (Bath) Responds to Changes in the Concentration of Copper in the Growth Medium

    PubMed Central

    Karlsen, Odd A.; Berven, Frode S.; Stafford, Graham P.; Larsen, Øivind; Murrell, J. Colin; Jensen, Harald B.; Fjellbirkeland, Anne

    2003-01-01

    Expression of surface-associated and secreted protein MopE of the methanotrophic bacterium Methylococcus capsulatus (Bath) in response to the concentration of copper ions in the growth medium was investigated. The level of protein associated with the cells and secreted to the medium changed when the copper concentration in the medium varied and was highest in cells exposed to copper stress. PMID:12676726

  6. The surface-associated and secreted MopE protein of Methylococcus capsulatus (Bath) responds to changes in the concentration of copper in the growth medium.

    PubMed

    Karlsen, Odd A; Berven, Frode S; Stafford, Graham P; Larsen, Øivind; Murrell, J Colin; Jensen, Harald B; Fjellbirkeland, Anne

    2003-04-01

    Expression of surface-associated and secreted protein MopE of the methanotrophic bacterium Methylococcus capsulatus (Bath) in response to the concentration of copper ions in the growth medium was investigated. The level of protein associated with the cells and secreted to the medium changed when the copper concentration in the medium varied and was highest in cells exposed to copper stress. PMID:12676726

  7. Chiral Restoration in a Nuclear Medium ---Probed by S-Wave Pion Dynamics---

    NASA Astrophysics Data System (ADS)

    Kienle, P.

    Using 500 MeV (d,^3He π^-) pion transfer reactions in recoil free kinematics, pionic 1s-states were populated in the ^{115,119,123}Sn isotopes and their binding energies and widths determined by precision missing mass spectroscopy. Using these data and corresponding ones from iso-scalar light nuclei nuclei, ^{16}O, ^{20}Ne and ^{28}Si, we determined the pion nucleus s-wave strength parameters, b_0, b_1, Re B_0, and Im B_0. By comparison of the iso-vector pion nucleon strength, determined from pionic hydrogen X-ray spectroscopy b_1^{free}, with the b_1 in a nuclear medium scaled to the density ρ(0), we deduced a scaling factor, the square of the pion decay constant in the vacuum and in nuclear medium, as R = b_1^{free} / b_1 = f^2_{π}(ρ_0)/f^2_{π} = 0.64. Thus from the observed increase of the pion s-wave iso-vector strength in a nuclear medium a reduction of f^2_{π}, the order parameter of chiral symme try breaking, is indicated in accordance with theoretical expectations. This finding is supported by recent π^+ and π^- scattering experiments. A short outlook is given on a future program at RIBF in RIKEN for precision studies of deeply bound 1s-states in heavy nuclei.

  8. Modeling of nanoparticle transport and deposition in a porous medium: Effects of pore surface heterogeneity

    NASA Astrophysics Data System (ADS)

    Pham, Ngoc; Papavassiliou, Dimitrios

    2014-11-01

    Pore surface charge heterogeneity has been found to affect particle retention in flow through porous media. In this study, retention of nanoparticles under different surface blocking conditions is numerically investigated. Micro-CT scanning is used to reconstruct the 3D geometry of sandstone and image-based analysis is used to characterize the pore space and the mineral composition of the rock. Flow of water through the sample is simulated with the lattice Boltzmann method. The motion of nanoparticles is modeled by injection of particles moving under convection and molecular diffusion and recording their trajectories in time. When interacting with the pore surface, particles can be retained onto the surface with a particular deposition rate. As deposited particles hinder the retention of other particles by blocking occupied sites, the deposition is considered to be a second order process. Particle breakthrough under different modeled and real distributions of surface heterogeneity as a function of various surface blocking conditions is investigated. The effect is stronger when parts of the surface are much more favorable for deposition than others. Acknowledgements: Advanced Energy Consortium (AEC BEG08-022) & XSEDE (CTS090017).

  9. Experimental evidence of dynamical propagation for solitary waves in ultra slow stochastic non-local Kerr medium.

    PubMed

    Louis, H; Tlidi, M; Louvergneaux, E

    2016-07-11

    We perform a statistical analysis of the optical solitary wave propagation in an ultra-slow stochastic non-local focusing Kerr medium such as liquid crystals. Our experimental results show that the localized beam trajectory presents a dynamical random walk whose beam position versus the propagation distance z depicts two different kind of evolutions A power law is found for the beam position standard deviation during the first stage of propagation. It obeys approximately z3/2 up to ten times the power threshold for solitary wave generation. PMID:27410886

  10. Experimental evidence of dynamical propagation for solitary waves in ultra slow stochastic non-local Kerr medium.

    PubMed

    Louis, H; Tlidi, M; Louvergneaux, E

    2016-07-11

    We perform a statistical analysis of the optical solitary wave propagation in an ultra-slow stochastic non-local focusing Kerr medium such as liquid crystals. Our experimental results show that the localized beam trajectory presents a dynamical random walk whose beam position versus the propagation distance z depicts two different kind of evolutions A power law is found for the beam position standard deviation during the first stage of propagation. It obeys approximately z3/2 up to ten times the power threshold for solitary wave generation. PMID:27410887

  11. Correlation between Dynamic Heterogeneity and Medium-Range Order in Two-Dimensional Glass-Forming Liquids

    SciTech Connect

    Kawasaki, Takeshi; Araki, Takeaki; Tanaka, Hajime

    2007-11-23

    A glassy state of matter results if crystallization is avoided upon cooling or increasing density. However, the physical factors controlling the ease of vitrification and nature of the glass transition remain elusive. Using numerical simulations of polydisperse hard disks, we find a direct relation between medium-range crystalline ordering and the slow dynamics which characterizes the glass transition. This suggests an intriguing scenario that the strength of frustration controls both the ease of vitrification and nature of the glass transition. Vitrification may be a process of hidden crystalline ordering under frustration, at least in our system.

  12. Reaction dynamics induced by the radioactive ion beam 7Be on medium-mass and heavy targets

    NASA Astrophysics Data System (ADS)

    Mazzocco, M.; Boiano, A.; Boiano, C.; La Commara, M.; Manea, C.; Parascandolo, C.; Pierroutsakou, D.; Stefanini, C.; Strano, E.; Torresi, D.; Acosta, L.; Di Meo, P.; Fernandez-Garcia, J. P.; Glodariu, T.; Grebosz, J.; Guglielmetti, A.; Keeley, N.; Lay, J. A.; Marquinez-Duran, G.; Martel, I.; Mazzocchi, C.; Molini, P.; Nicoletto, M.; Pakou, A.; Parkar, V. V.; Rusek, K.; Sánchez-Benítez, A. M.; Sandoli, M.; Sava, T.; Sgouros, O.; Signorini, C.; Silvestri, R.; Soramel, F.; Soukeras, V.; Stiliaris, E.; Stroe, L.; Toniolo, N.; Zerva, K.

    2015-10-01

    We studied the reaction dynamics induced at Coulomb barrier energies by the weakly-bound Radioactive Ion Beam 7Be (Sα = 1.586 MeV) on medium-mass (58Ni) and heavy (208Pb) targets. The experiments were performed at INFN-LNL (Italy), where a 2-3×105 pps 7Be secondary beam was produced with the RIB in-flight facility EXOTIC. Charged reaction products were detected by means of high-granularity silicon detectors in rather wide angular ranges. The contribution presents an up-to-date status of the data analysis and theoretical interpretation for both systems.

  13. Using Dynamic Geometry Software for the Intersection Surfaces

    ERIC Educational Resources Information Center

    Koparan, Timur; Yilmaz, Gül Kaleli

    2015-01-01

    The purpose of this study is to define prospective teacher views about using dynamic geometry software for intersection surfaces. The study was conducted as a case study. For this purpose, data collection tool was developed based on the opinion of two experts. The data collection tool consists of 4 open-ended questions related to the intersection…

  14. Nonlinear dynamics of a ball rolling on a surface

    NASA Astrophysics Data System (ADS)

    Virgin, L. N.; Lyman, T. C.; Davis, R. B.

    2010-03-01

    An underlying potential energy function can provide visual and intuitive insight into a system's stability and overall behavior. In particular, the motion of a ball moving along a curve or surface in a gravitational field provides a macroscale demonstration of interesting dynamics. We investigate the motion of a small ball rolling along a smooth two-dimensional potential surface. A direct experimental realization of this situation is suitable for demonstrating some classic features of nonlinear dynamics. The results of numerical simulations are directly compared with experimental data. To better characterize the dynamical behavior of the ball, especially when it is undergoing chaotic motion, several descriptive measures are discussed, including time-lag embedding, initial condition maps, power spectra, Lyapunov exponents, and fractal dimensions.

  15. Statistical optimization of the medium composition by response surface methodology to enhance schizophyllan production by Schizophyllum commune.

    PubMed

    Li, Wenbing; Zhou, Pengpeng; Yu, Longjiang

    2011-01-01

    The response surface methodology (RSM) involving central composite design (CCD) was employed to optimize the fermentation medium for the cell growth and schizophllan production by Schizophyllum commune CGMCC 5.113 in submerged culture at pH 6.5 and 26 degrees C. The four variables involved in this study were glucose, yeast extract, ammonium nitrate, and magnesium sulfate. The statistical analysis of the results showed that, in the range studied, glucose and yeast extract had a highly significant effect on schizophyllan production. The optimal medium for schizophyllan production calculated from the regression model of RSM was as follows: glucose, 18 g/l; yeast extract, 0.5 g/l; NH4NO3, 0.48 g/l; and MgSO4, 0.05 g/l, with a predicted maximum schizophyllan production of 11.74 g/l. These predicted values were experimentally validated. The excellent correlation between predicted and measured values justifies the validity of the response model. The results of bioreactor fermentation also show that the optimized medium enhanced schizophyllan production (12.80 g/l) by S. commune in a 5-1 fermenter. PMID:21630592

  16. Hydromagnetic Flow and Heat Transfer over a Porous Oscillating Stretching Surface in a Viscoelastic Fluid with Porous Medium

    PubMed Central

    Khan, Sami Ullah; Ali, Nasir; Abbas, Zaheer

    2015-01-01

    An analysis is carried out to study the heat transfer in unsteady two-dimensional boundary layer flow of a magnetohydrodynamics (MHD) second grade fluid over a porous oscillating stretching surface embedded in porous medium. The flow is induced due to infinite elastic sheet which is stretched periodically. With the help of dimensionless variables, the governing flow equations are reduced to a system of non-linear partial differential equations. This system has been solved numerically using the finite difference scheme, in which a coordinate transformation is used to transform the semi-infinite physical space to a bounded computational domain. The influence of the involved parameters on the flow, the temperature distribution, the skin-friction coefficient and the local Nusselt number is shown and discussed in detail. The study reveals that an oscillatory sheet embedded in a fluid-saturated porous medium generates oscillatory motion in the fluid. The amplitude and phase of oscillations depends on the rheology of the fluid as well as on the other parameters coming through imposed boundary conditions, inclusion of body force term and permeability of the porous medium. It is found that amplitude of flow velocity increases with increasing viscoelastic and mass suction/injection parameters. However, it decreases with increasing the strength of the applied magnetic field. Moreover, the temperature of fluid is a decreasing function of viscoelastic parameter, mass suction/injection parameter and Prandtl number. PMID:26657931

  17. Hydromagnetic Flow and Heat Transfer over a Porous Oscillating Stretching Surface in a Viscoelastic Fluid with Porous Medium.

    PubMed

    Khan, Sami Ullah; Ali, Nasir; Abbas, Zaheer

    2015-01-01

    An analysis is carried out to study the heat transfer in unsteady two-dimensional boundary layer flow of a magnetohydrodynamics (MHD) second grade fluid over a porous oscillating stretching surface embedded in porous medium. The flow is induced due to infinite elastic sheet which is stretched periodically. With the help of dimensionless variables, the governing flow equations are reduced to a system of non-linear partial differential equations. This system has been solved numerically using the finite difference scheme, in which a coordinate transformation is used to transform the semi-infinite physical space to a bounded computational domain. The influence of the involved parameters on the flow, the temperature distribution, the skin-friction coefficient and the local Nusselt number is shown and discussed in detail. The study reveals that an oscillatory sheet embedded in a fluid-saturated porous medium generates oscillatory motion in the fluid. The amplitude and phase of oscillations depends on the rheology of the fluid as well as on the other parameters coming through imposed boundary conditions, inclusion of body force term and permeability of the porous medium. It is found that amplitude of flow velocity increases with increasing viscoelastic and mass suction/injection parameters. However, it decreases with increasing the strength of the applied magnetic field. Moreover, the temperature of fluid is a decreasing function of viscoelastic parameter, mass suction/injection parameter and Prandtl number. PMID:26657931

  18. Optimization of medium components for production of chitin deacetylase by Bacillus amyloliquefaciens Z7, using response surface methodology

    PubMed Central

    He, Yuanhao; Xu, Jianping; Wang, Shengjie; Zhou, Guoying; Liu, Junang

    2014-01-01

    Plackett–Burman design and Box–Behnken response surface methodology (RSM) was employed to optimize the medium components for the chitin deacetylase (CDA) activity from Bacillus amyloliquefaciens Z7. Plackett–Burman design was applied to determine the specific medium components affecting CDA activity and found that starch, chitin and MgSO4 were critical in augmenting CDA activity. These significant parameters were further optimized using Box–Behnken RSM and the optimum concentrations of starch, chitin and MgSO4 were found to be 24.4, 8.8 and 0.19 g/L, respectively. The optimum medium composition was chitin 8.8 g/L, starch 24.4 g/L, yeast extract 10g/L, MgSO4 0.19 g/L, K2HPO4 0.3 g/L and NaCl 5 g/L. Under these optimal conditions, the CDA activity of Bacillus amyloliquefaciens Z7 increased distinctly from 18.75 to 27.48 U/mL (46.6% increase in total yield). PMID:26740755

  19. Surface dynamics and mechanics in liquid crystal polymer coatings

    NASA Astrophysics Data System (ADS)

    Liu, Danqing; Broer, Dirk J.

    2015-03-01

    Based on liquid crystal networks we developed `smart' coatings with responsive surface topographies. Either by prepatterning or by the formation of self-organized structures they can be switched on and off in a pre-designed manner. Here we provide an overview of our methods to generate coatings that form surface structures upon the actuation by light. The coating oscillates between a flat surface and a surface with pre-designed 3D micro-patterns by modulating a light source. With recent developments in solid state lighting, light is an attractive trigger medium as it can be integrated in a device for local control or can be used remotely for flood or localized exposure. The basic principle of formation of surface topographies is based on the change of molecular organization in ordered liquid crystal polymer networks. The change in order leads to anisotropic dimensional changes with contraction along the director and expansion to the two perpendicular directions and an increase in volume by the formation of free volume. These two effects work in concert to provide local expansion and contraction in the coating steered by the local direction of molecular orientation. The surface deformation, expressed as the height difference between the activated regions and the non-activated regions divided by the initial film thickness, is of the order of 20%. Switching occurs immediately when the light is switched `on' and `off' and takes several tens of seconds.

  20. Wetting dynamics of alkyl ketene dimer on cellulosic model surfaces

    SciTech Connect

    Garnier, G.; Bertin, M.; Smrckova, M.

    1999-10-26

    The dynamic wetting of a commercial alkyl ketene dimer (AKD) wax was measured on model cellulosic surfaces. The variables investigated were temperature and the surface composition. The model surfaces consisted of cellulose and cellulose acetate films as well as glass. These surfaces are smooth by industrial standards but not on a molecular level. The objective of the study was to predict the extent of AKD wetting during the time frame of papermaking. For smooth surfaces, AKD particles wet but do not spread on the hydrophilic surfaces investigated. AKD wetting proceeds from the balance of the interfacial forces with the viscous dissipation. The effect of gravity can be neglected for papermaking conditions. The Hoffman-Tanner equation modified for partial wetting provided a very good fit of the dynamic wetting. The slope of the graph is a function of temperature but not of the solid surface composition. Maslyiah's model also fits the experimental results well, but with a physically unrealistic value of the fitting parameter. For partial wetting, the complex but rigorous Cox equation is recommended to estimate the slip length over macroscopic wetting dimensions.

  1. Constitutive Analysis of Dynamic Recrystallization and Flow Behavior of a Medium Carbon Nb-V Microalloyed Steel

    NASA Astrophysics Data System (ADS)

    Shen, Wen-fei; Zhang, Li-wen; Zhang, Chi; Xu, Yi-feng; Shi, Xin-hua

    2016-05-01

    The dynamic recrystallization (DRX) and flow behavior of a medium carbon Nb-V microalloyed steel was investigated using hot isothermal compression experiments in a wide range of temperatures (1123-1473 K) and strain rates (0.01-10 s-1). The flow stress curves were analyzed comprehensively, and it was found that the flow stress of this steel is higher than C-Mn steel and V microalloyed steel. All the curves obtained can be ranged into three principal types: work hardening, dynamic recovery, and DRX. The DRX behavior of this steel was investigated, including critical strain, kinetics of DRX, and microstructure. The constitutive equation to predict the flow stress of the tested steel was also developed, and the analysis result indicates that the developed model has a high accuracy in predicting the flow stress during hot deformation.

  2. Mapping Impervious Surface Expansion using Medium-resolution Satellite Image Time Series: A Case Study in the Yangtze River Delta, China

    NASA Technical Reports Server (NTRS)

    Gao, Feng; DeColstoun, Eric Brown; Ma, Ronghua; Weng, Qihao; Masek, Jeffrey G.; Chen, Jin; Pan, Yaozhong; Song, Conghe

    2012-01-01

    Cities have been expanding rapidly worldwide, especially over the past few decades. Mapping the dynamic expansion of impervious surface in both space and time is essential for an improved understanding of the urbanization process, land-cover and land-use change, and their impacts on the environment. Landsat and other medium-resolution satellites provide the necessary spatial details and temporal frequency for mapping impervious surface expansion over the past four decades. Since the US Geological Survey opened the historical record of the Landsat image archive for free access in 2008, the decades-old bottleneck of data limitation has gone. Remote-sensing scientists are now rich with data, and the challenge is how to make best use of this precious resource. In this article, we develop an efficient algorithm to map the continuous expansion of impervious surface using a time series of four decades of medium-resolution satellite images. The algorithm is based on a supervised classification of the time-series image stack using a decision tree. Each imerpervious class represents urbanization starting in a different image. The algorithm also allows us to remove inconsistent training samples because impervious expansion is not reversible during the study period. The objective is to extract a time series of complete and consistent impervious surface maps from a corresponding times series of images collected from multiple sensors, and with a minimal amount of image preprocessing effort. The approach was tested in the lower Yangtze River Delta region, one of the fastest urban growth areas in China. Results from nearly four decades of medium-resolution satellite data from the Landsat Multispectral Scanner (MSS), Thematic Mapper (TM), Enhanced Thematic Mapper plus (ETM+) and China-Brazil Earth Resources Satellite (CBERS) show a consistent urbanization process that is consistent with economic development plans and policies. The time-series impervious spatial extent maps derived

  3. Numerical Simulation of MHD Hiemenz Flow of a Micropolar Fluid towards a Nonlinear Stretching Surface through a Porous Medium

    NASA Astrophysics Data System (ADS)

    Sharma, Rajesh; Bhargava, Rama

    2015-07-01

    In this article, the two-dimensional boundary layer problem of Hiemenz flow (two-dimensional flow of a fluid near a stagnation point) of an incompressible micropolar fluid towards a nonlinear stretching surface placed in a porous medium in the presence of transverse magnetic field is examined. The resulting nonlinear differential equations governing the problem have been transformed by a similarity transformation into a system of nonlinear ordinary differential equations which are solved numerically by the Element Free Galerkin method. The influence of various parameters on the velocity, microrotation, temperature, and concentration is shown. Some of the results are compared with the Finite Element Method. Finally, validation of the numerical results is demonstrated for local skin friction ? for hydrodynamic micropolar fluid flow on a linearly stretching surface.

  4. Generation of a medium vacuum pressure by using two different pumping methods in the KRISS dynamic flow-control system

    NASA Astrophysics Data System (ADS)

    Hong, S. S.; Lim, J. Y.; Khan, W.

    2014-02-01

    Pumping systems with large vacuum chambers have numerous applications in the process industry: for example, mixing of various types of gases as in the semiconductor industry, the calibration of vacuum gauges, the measurement of outgassing rates of various materials in the field of space technology, etc. Most often, these systems are used in the medium vacuum range (10-1 Pa-102 Pa) and in the dynamically-generated pressure mode. We have designed and developed a new dynamic flow system at the KRISS (Korea Research Institute of Standards and Science) that can be used for such applications with reliability in the range from 0.1 Pa - 133 Pa. In this report, the design philosophy, operational procedure and experimental data for the generated stable pressure points in the chamber of the system are discussed. The data consist the pressure points generated in the medium vacuum range while pumping the chamber of the system by using two different methods: first by using a dry scroll pump and then by using a combination of a turbomolecular pump backed by the same scroll pump. The relative standard deviations in the pressure points were calculated and were found to be greater than 1.5% for the scroll pump and less than 0.5% for the turbomolecular pump.

  5. Oxidation-driven surface dynamics on NiAl(100)

    DOE PAGESBeta

    Qin, Hailang; Chen, Xidong; Li, Liang; Sutter, Peter W.; Zhou, Guangwen

    2014-12-29

    Atomic steps, a defect common to all crystal surfaces, can play an important role in many physical and chemical processes. However, attempts to predict surface dynamics under nonequilibrium conditions are usually frustrated by poor knowledge of the atomic processes of surface motion arising from mass transport from/to surface steps. Using low-energy electron microscopy that spatially and temporally resolves oxide film growth during the oxidation of NiAl(100) we demonstrate that surface steps are impermeable to oxide film growth. The advancement of the oxide occurs exclusively on the same terrace and requires the coordinated migration of surface steps. The resulting piling upmore » of surface steps ahead of the oxide growth front progressively impedes the oxide growth. This process is reversed during oxide decomposition. The migration of the substrate steps is found to be a surface-step version of the well-known Hele-Shaw problem, governed by detachment (attachment) of Al atoms at step edges induced by the oxide growth (decomposition). As a result, by comparing with the oxidation of NiAl(110) that exhibits unimpeded oxide film growth over substrate steps, we suggest that whenever steps are the source of atoms used for oxide growth they limit the oxidation process; when atoms are supplied from the bulk, the oxidation rate is not limited by the motion of surface steps.« less

  6. Oxidation-driven surface dynamics on NiAl(100)

    NASA Astrophysics Data System (ADS)

    Qin, Hailang; Chen, Xidong; Li, Liang; Sutter, Peter W.; Zhou, Guangwen

    2015-01-01

    Atomic steps, a defect common to all crystal surfaces, can play an important role in many physical and chemical processes. However, attempts to predict surface dynamics under nonequilibrium conditions are usually frustrated by poor knowledge of the atomic processes of surface motion arising from mass transport from/to surface steps. Using low-energy electron microscopy that spatially and temporally resolves oxide film growth during the oxidation of NiAl(100) we demonstrate that surface steps are impermeable to oxide film growth. The advancement of the oxide occurs exclusively on the same terrace and requires the coordinated migration of surface steps. The resulting piling up of surface steps ahead of the oxide growth front progressively impedes the oxide growth. This process is reversed during oxide decomposition. The migration of the substrate steps is found to be a surface-step version of the well-known Hele-Shaw problem, governed by detachment (attachment) of Al atoms at step edges induced by the oxide growth (decomposition). By comparing with the oxidation of NiAl(110) that exhibits unimpeded oxide film growth over substrate steps we suggest that whenever steps are the source of atoms used for oxide growth they limit the oxidation process; when atoms are supplied from the bulk, the oxidation rate is not limited by the motion of surface steps.

  7. Oxidation-driven surface dynamics on NiAl(100)

    SciTech Connect

    Qin, Hailang; Chen, Xidong; Li, Liang; Sutter, Peter W.; Zhou, Guangwen

    2014-12-29

    Atomic steps, a defect common to all crystal surfaces, can play an important role in many physical and chemical processes. However, attempts to predict surface dynamics under nonequilibrium conditions are usually frustrated by poor knowledge of the atomic processes of surface motion arising from mass transport from/to surface steps. Using low-energy electron microscopy that spatially and temporally resolves oxide film growth during the oxidation of NiAl(100) we demonstrate that surface steps are impermeable to oxide film growth. The advancement of the oxide occurs exclusively on the same terrace and requires the coordinated migration of surface steps. The resulting piling up of surface steps ahead of the oxide growth front progressively impedes the oxide growth. This process is reversed during oxide decomposition. The migration of the substrate steps is found to be a surface-step version of the well-known Hele-Shaw problem, governed by detachment (attachment) of Al atoms at step edges induced by the oxide growth (decomposition). As a result, by comparing with the oxidation of NiAl(110) that exhibits unimpeded oxide film growth over substrate steps, we suggest that whenever steps are the source of atoms used for oxide growth they limit the oxidation process; when atoms are supplied from the bulk, the oxidation rate is not limited by the motion of surface steps.

  8. Oxidation-driven surface dynamics on NiAl(100)

    PubMed Central

    Qin, Hailang; Chen, Xidong; Li, Liang; Sutter, Peter W.; Zhou, Guangwen

    2015-01-01

    Atomic steps, a defect common to all crystal surfaces, can play an important role in many physical and chemical processes. However, attempts to predict surface dynamics under nonequilibrium conditions are usually frustrated by poor knowledge of the atomic processes of surface motion arising from mass transport from/to surface steps. Using low-energy electron microscopy that spatially and temporally resolves oxide film growth during the oxidation of NiAl(100) we demonstrate that surface steps are impermeable to oxide film growth. The advancement of the oxide occurs exclusively on the same terrace and requires the coordinated migration of surface steps. The resulting piling up of surface steps ahead of the oxide growth front progressively impedes the oxide growth. This process is reversed during oxide decomposition. The migration of the substrate steps is found to be a surface-step version of the well-known Hele-Shaw problem, governed by detachment (attachment) of Al atoms at step edges induced by the oxide growth (decomposition). By comparing with the oxidation of NiAl(110) that exhibits unimpeded oxide film growth over substrate steps we suggest that whenever steps are the source of atoms used for oxide growth they limit the oxidation process; when atoms are supplied from the bulk, the oxidation rate is not limited by the motion of surface steps. PMID:25548155

  9. Influence of wave-packet dynamics on the medium gain of an atomic system

    SciTech Connect

    Delagnes, J. C.; Bouchene, M. A.

    2007-10-15

    A sequence of two femtosecond pulses--a strong driving {pi}-polarized pulse and a weak propagating {sigma}-polarized pulse--excites resonantly the S{sub 1/2}{yields}P{sub 1/2} transition of an atomic system. Strong interference effects take place in the system between absorption and emission paths leading to a substantial amplification of the {sigma} pulse. We study the influence of the fine structure on the medium gain when the contribution of the off-resonant P{sub 3/2} level is taken into account. A drastic reduction of the medium gain is obtained. This effect is explained within the bright-state-dark-state formalism where the strong driving pulse creates a wave packet that can be trapped in a state--the bright state--leading to a significant reduction of the gain for the {sigma} pulse. Finally, we also show that periodical gain dependence with the driving pulse energy exhibits a significant change in its period value (compared with expected Rabi oscillations)

  10. Drop impact dynamics on liquid-infused superhydrophobic surfaces

    NASA Astrophysics Data System (ADS)

    Kim, Jeong-Hyun; Rothstein, Jonathan

    2015-11-01

    In this talk, we present a series of experiments investigating the drop impact dynamics on hydrophobic, air-infused and lubricant-infused superhydrophobic surfaces. To create the superhydrophobic surfaces, smooth Teflon (PTFE) surfaces were roughened by a 240-grit sandpaper. The immiscible and incompressible silicone oils with different viscosities were infused into features of the superhydrophobic surfaces by a skim coating technique. The spreading and retraction dynamics on a series of the tested surfaces will be presented. We will show that the maximal deformation of the drops on lubricant-infused surfaces grows with increasing viscosity ratio between a water drop and the infused oil. We will show that this increase in the maximal deformation with the viscosity ratio is consistent with increasing the velocity and the viscosity of the drops but the rims of the drops destabilize with increasing the drop velocity. Finally, we will demonstrate that increasing the viscosity of the infused oil induces higher viscous force at the contact line, resulting in reduction in the movement of the drops during retraction and corresponding increase in the final drop size.

  11. Drop impact and rebound dynamics on an inclined superhydrophobic surface.

    PubMed

    Yeong, Yong Han; Burton, James; Loth, Eric; Bayer, Ilker S

    2014-10-14

    Due to its potential in water-repelling applications, the impact and rebound dynamics of a water drop impinging perpendicular to a horizontal superhydrophobic surface have undergone extensive study. However, drops tend to strike a surface at an angle in applications. In such cases, the physics governing the effects of oblique impact are not well studied or understood. Therefore, the objective of this study was to conduct an experiment to investigate the impact and rebound dynamics of a drop at various liquid viscosities, in an isothermal environment, and on a nanocomposite superhydrophobic surface at normal and oblique impact conditions (tilted at 15°, 30°, 45°, and 60°). This study considered drops falling from various heights to create normal impact Weber numbers ranging from 6 to 110. In addition, drop viscosity was varied by decreasing the temperature for water drops and by utilizing water-glycerol mixtures, which have similar surface tension to water but higher viscosities. Results revealed that oblique and normal drop impact behaved similarly (in terms of maximum drop spread as well as rebound dynamics) at low normal Weber numbers. However, at higher Weber numbers, normal and oblique impact results diverged in terms of maximum spread, which could be related to asymmetry and more complex outcomes. These asymmetry effects became more pronounced as the inclination angle increased, to the point where they dominated the drop impact and rebound characteristics when the surface was inclined at 60°. The drop rebound characteristics on inclined surfaces could be classified into eight different outcomes driven primarily by normal Weber number and drop Ohnesorge numbers. However, it was found that these outcomes were also a function of the receding contact angle, whereby reduced receding angles yielded tail-like structures. Nevertheless, the contact times of the drops with the coating were found to be generally independent of surface inclination. PMID:25216298

  12. TiN surface dynamics: role of surface and bulk mass transport processes

    SciTech Connect

    Bareno, J.; Swiech, W.; Petrova, V.; Petrov, I.; Greene, J. E.; Kodambaka, S.; Khare, S. V.

    2007-02-09

    Transition-metal nitrides, such as TiN, have a wide variety of applications as hard, wear-resistant coatings, as diffusion barriers, and as scratch-resistant and anti-reflective coatings in optics. Understanding the surface morphological and microstructural evolution of these materials is crucial for improving the performance of devices. Studies of surface step dynamics enable determination of the rate-limiting mechanisms, corresponding surface mass transport parameters, and step energies. However, most models describing these phenomena are limited in application to simple elemental metal and semiconductor surfaces. Here, we summarize recent progress toward elucidating the interplay of surface and bulk diffusion processes on morphological evolution of compound surfaces. Specifically, we analyze the coarsening/decay kinetics of two- and three-dimensional TiN(111) islands and the effect of surface-terminated dislocations on TiN(111) steps.

  13. Synthesis of ZnO nanoparticles on a clay mineral surface in dimethyl sulfoxide medium.

    PubMed

    Németh, József; Rodríguez-Gattorno, Geonel; Díaz, David; Vázquez-Olmos, América R; Dékány, Imre

    2004-03-30

    Nanocrystalline ZnO particles have been prepared with different methods using zinc cyclohexanebutyrate as precursor in dimethyl sulfoxide (DMSO) medium via alkaline hydrolysis. A series of preparations were carried out in the presence of layered silicates (kaolinite and montmorillonite). It was revealed by different measurement techniques that the presence of the clay minerals has a stabilization influence on the size of the ZnO nanocrystals. UV-vis absorption spectra show a blue shift when the nanoparticles are prepared in the presence of the clay minerals. The average particle diameters calculated from the Brus equation ranged from 2.6 to 13.0 nm. The UV-vis spectra of the synthesized nanoparticles did not show any red shift after 2-3 days, demonstrating that stable ZnO nanocrystals are present in the dispersions. The presence of the ZnO nanoparticles was also proven by fluorescence measurements. A number of the nanoparticles are incorporated into the interlamellar space of the clays, and an intercalated structure is formed as proven by X-ray diffraction (XRD) measurements. The size of the nanoparticles in the interlamellar space is in the range of 1-2 nm according to the XRD patterns. Transmission electron microscopy and high-resolution transmission electron microscopy investigations were applied to determine directly the particle size and the size distribution of the nanoparticles. PMID:15835163

  14. Detection of small surface vessels in near, medium, and far infrared spectral bands

    NASA Astrophysics Data System (ADS)

    Dulski, R.; Milewski, S.; Kastek, M.; Trzaskawka, P.; Szustakowski, M.; Ciurapinski, W.; Zyczkowski, M.

    2011-11-01

    Protection of naval bases and harbors requires close co-operation between security and access control systems covering land areas and those monitoring sea approach routes. The typical location of naval bases and harbors - usually next to a large city - makes it difficult to detect and identify a threat in the dense regular traffic of various sea vessels (i.e. merchant ships, fishing boats, tourist ships). Due to the properties of vessel control systems, such as AIS (Automatic Identification System), and the effectiveness of radar and optoelectronic systems against different targets it seems that fast motor boats called RIB (Rigid Inflatable Boat) could be the most serious threat to ships and harbor infrastructure. In the paper the process and conditions for the detection and identification of high-speed boats in the areas of ports and naval bases in the near, medium and far infrared is presented. Based on the results of measurements and recorded thermal images the actual temperature contrast delta T (RIB / sea) will be determined, which will further allow to specify the theoretical ranges of detection and identification of the RIB-type targets for an operating security system. The data will also help to determine the possible advantages of image fusion where the component images are taken in different spectral ranges. This will increase the probability of identifying the object by the multi-sensor security system equipped additionally with the appropriate algorithms for detecting, tracking and performing the fusion of images from the visible and infrared cameras.

  15. Exploring QCD dynamics in medium energy γA semiexclusive collisions

    NASA Astrophysics Data System (ADS)

    Larionov, A. B.; Strikman, M.

    2016-09-01

    We demonstrate that studies of the semiexclusive large angle photon-nucleus reactions: γ + A →h1 +h2 +(A - 1) * with tagged photon beams of energies 6 ÷ 10 GeV which can be performed in Hall D at Thomas Jefferson National Acceleration Facility (TJNAF) would allow to probe several aspects of the QCD dynamics: establish the t-range in which transition from soft to hard dynamics occurs, compare the strength of the interaction of various mesons and baryons with nucleons at the energies of few GeV, as well as look for the color transparency effects.

  16. Investigating the dynamics of surface-immobilized DNA nanomachines.

    PubMed

    Dunn, Katherine E; Trefzer, Martin A; Johnson, Steven; Tyrrell, Andy M

    2016-01-01

    Surface-immobilization of molecules can have a profound influence on their structure, function and dynamics. Toehold-mediated strand displacement is often used in solution to drive synthetic nanomachines made from DNA, but the effects of surface-immobilization on the mechanism and kinetics of this reaction have not yet been fully elucidated. Here we show that the kinetics of strand displacement in surface-immobilized nanomachines are significantly different to those of the solution phase reaction, and we attribute this to the effects of intermolecular interactions within the DNA layer. We demonstrate that the dynamics of strand displacement can be manipulated by changing strand length, concentration and G/C content. By inserting mismatched bases it is also possible to tune the rates of the constituent displacement processes (toehold-binding and branch migration) independently, and information can be encoded in the time-dependence of the overall reaction. Our findings will facilitate the rational design of surface-immobilized dynamic DNA nanomachines, including computing devices and track-based motors. PMID:27387252

  17. Investigating the dynamics of surface-immobilized DNA nanomachines

    PubMed Central

    Dunn, Katherine E.; Trefzer, Martin A.; Johnson, Steven; Tyrrell, Andy M.

    2016-01-01

    Surface-immobilization of molecules can have a profound influence on their structure, function and dynamics. Toehold-mediated strand displacement is often used in solution to drive synthetic nanomachines made from DNA, but the effects of surface-immobilization on the mechanism and kinetics of this reaction have not yet been fully elucidated. Here we show that the kinetics of strand displacement in surface-immobilized nanomachines are significantly different to those of the solution phase reaction, and we attribute this to the effects of intermolecular interactions within the DNA layer. We demonstrate that the dynamics of strand displacement can be manipulated by changing strand length, concentration and G/C content. By inserting mismatched bases it is also possible to tune the rates of the constituent displacement processes (toehold-binding and branch migration) independently, and information can be encoded in the time-dependence of the overall reaction. Our findings will facilitate the rational design of surface-immobilized dynamic DNA nanomachines, including computing devices and track-based motors. PMID:27387252

  18. Fast and Slow Wetting Dynamics on nanostructured surfaces

    NASA Astrophysics Data System (ADS)

    Nandyala, Dhiraj; Rahmani, Amir; Cubaud, Thomas; Colosqui, Carlos

    2015-11-01

    This talk will present force-displacement and spontaneous drop spreading measurements on diverse nanostructured surfaces (e.g., mesoporous titania thin films, nanoscale pillared structures, on silica or glass substrates). Experimental measurements are performed for water-air and water-oil systems. The dynamics of wetting observed in these experiments can present remarkable crossovers from fast to slow or arrested dynamics. The emergence of a slow wetting regime is attributed to a multiplicity of metastable equilibrium states induced by nanoscale surface features. The crossover point can be dramatically advanced or delayed by adjusting specific physical parameters (e.g., viscosity of the wetting phases) and geometric properties of the surface nanostructure (e.g., nanopore/pillar radius and separation). Controlling the crossover point to arrested dynamics can effectively modify the degree of contact angle hysteresis and magnitude of liquid adhesion forces observed on surfaces of different materials. This work is supported by a SEED Award from The Office of Brookhaven National Laboratory Affairs at Stony Brook University.

  19. Efficient modelling of droplet dynamics on complex surfaces.

    PubMed

    Karapetsas, George; Chamakos, Nikolaos T; Papathanasiou, Athanasios G

    2016-03-01

    This work investigates the dynamics of droplet interaction with smooth or structured solid surfaces using a novel sharp-interface scheme which allows the efficient modelling of multiple dynamic contact lines. The liquid-gas and liquid-solid interfaces are treated in a unified context and the dynamic contact angle emerges simply due to the combined action of the disjoining and capillary pressure, and viscous stresses without the need of an explicit boundary condition or any requirement for the predefinition of the number and position of the contact lines. The latter, as it is shown, renders the model able to handle interfacial flows with topological changes, e.g. in the case of an impinging droplet on a structured surface. Then it is possible to predict, depending on the impact velocity, whether the droplet will fully or partially impregnate the structures of the solid, or will result in a 'fakir', i.e. suspended, state. In the case of a droplet sliding on an inclined substrate, we also demonstrate the built-in capability of our model to provide a prediction for either static or dynamic contact angle hysteresis. We focus our study on hydrophobic surfaces and examine the effect of the geometrical characteristics of the solid surface. It is shown that the presence of air inclusions trapped in the micro-structure of a hydrophobic substrate (Cassie-Baxter state) result in the decrease of contact angle hysteresis and in the increase of the droplet migration velocity in agreement with experimental observations for super-hydrophobic surfaces. Moreover, we perform 3D simulations which are in line with the 2D ones regarding the droplet mobility and also indicate that the contact angle hysteresis may be significantly affected by the directionality of the structures with respect to the droplet motion. PMID:26828706

  20. Efficient modelling of droplet dynamics on complex surfaces

    NASA Astrophysics Data System (ADS)

    Karapetsas, George; Chamakos, Nikolaos T.; Papathanasiou, Athanasios G.

    2016-03-01

    This work investigates the dynamics of droplet interaction with smooth or structured solid surfaces using a novel sharp-interface scheme which allows the efficient modelling of multiple dynamic contact lines. The liquid-gas and liquid-solid interfaces are treated in a unified context and the dynamic contact angle emerges simply due to the combined action of the disjoining and capillary pressure, and viscous stresses without the need of an explicit boundary condition or any requirement for the predefinition of the number and position of the contact lines. The latter, as it is shown, renders the model able to handle interfacial flows with topological changes, e.g. in the case of an impinging droplet on a structured surface. Then it is possible to predict, depending on the impact velocity, whether the droplet will fully or partially impregnate the structures of the solid, or will result in a ‘fakir’, i.e. suspended, state. In the case of a droplet sliding on an inclined substrate, we also demonstrate the built-in capability of our model to provide a prediction for either static or dynamic contact angle hysteresis. We focus our study on hydrophobic surfaces and examine the effect of the geometrical characteristics of the solid surface. It is shown that the presence of air inclusions trapped in the micro-structure of a hydrophobic substrate (Cassie-Baxter state) result in the decrease of contact angle hysteresis and in the increase of the droplet migration velocity in agreement with experimental observations for super-hydrophobic surfaces. Moreover, we perform 3D simulations which are in line with the 2D ones regarding the droplet mobility and also indicate that the contact angle hysteresis may be significantly affected by the directionality of the structures with respect to the droplet motion.

  1. Dynamic Characteristics of High Intensity Shock Effect for Medium Weight Shock Testing Machine

    NASA Astrophysics Data System (ADS)

    Song, Feng; Sai, Jiangang; Yun, He; Bo, Gao

    This paper analyses the dynamic characteristics of MWMS by optimizing the design of the anvil table to ensure the waveform in allowing limit, simulating the impact of MWMS, and demonstrating the influence of the low-pass filter and the height of hammer drop to test results.

  2. Dynamics of ice nucleation on water repellent surfaces.

    PubMed

    Alizadeh, Azar; Yamada, Masako; Li, Ri; Shang, Wen; Otta, Shourya; Zhong, Sheng; Ge, Liehui; Dhinojwala, Ali; Conway, Ken R; Bahadur, Vaibhav; Vinciquerra, A Joseph; Stephens, Brian; Blohm, Margaret L

    2012-02-14

    Prevention of ice accretion and adhesion on surfaces is relevant to many applications, leading to improved operation safety, increased energy efficiency, and cost reduction. Development of passive nonicing coatings is highly desirable, since current antiicing strategies are energy and cost intensive. Superhydrophobicity has been proposed as a lead passive nonicing strategy, yet the exact mechanism of delayed icing on these surfaces is not clearly understood. In this work, we present an in-depth analysis of ice formation dynamics upon water droplet impact on surfaces with different wettabilities. We experimentally demonstrate that ice nucleation under low-humidity conditions can be delayed through control of surface chemistry and texture. Combining infrared (IR) thermometry and high-speed photography, we observe that the reduction of water-surface contact area on superhydrophobic surfaces plays a dual role in delaying nucleation: first by reducing heat transfer and second by reducing the probability of heterogeneous nucleation at the water-substrate interface. This work also includes an analysis (based on classical nucleation theory) to estimate various homogeneous and heterogeneous nucleation rates in icing situations. The key finding is that ice nucleation delay on superhydrophobic surfaces is more prominent at moderate degrees of supercooling, while closer to the homogeneous nucleation temperature, bulk and air-water interface nucleation effects become equally important. The study presented here offers a comprehensive perspective on the efficacy of textured surfaces for nonicing applications. PMID:22235939

  3. Experimental study of the dynamics of penetration of a solid body into a soil medium

    NASA Astrophysics Data System (ADS)

    Balandin, Vl. V.; Balandin, Vl. Vl.; Bragov, A. M.; Kotov, V. L.

    2016-06-01

    An experimental system is developed to determine the main parameters of the impact and penetration of a solid deformable body into a soft soil medium. This system is based on the technique of an inverse experiment with a measuring rod and the technique of a direct experiment with photo recording and the application of a shadow picture of the interaction of a striker with a soil target. To verify these techniques, the collision of a solid body with soil is studied by a numerical calculation and the time intervals in which the change of the resistance force is proportional to the penetration velocity squared are determined. The penetration resistance coefficients determined in direct and inverse experiments are shown to agree with each other in the collision velocity range 80-400 m/s, which supports the validity of the techniques and the reliability of measuring the total load.

  4. Real-time atomic resolution dynamics of glass surfaces

    NASA Astrophysics Data System (ADS)

    Ashtekar, Sumit Ravindra

    Although glasses are commonplace materials found in every walk of life, they have managed to remain mysterious for centuries. The origins of the defining characteristic of glasses, the glass transition, remain unknown. The glass transition is accompanied by a catastrophic increase in viscosity with a superexponential pace whose underlying reason has been difficult to pin down. Cooperatively rearranging regions (CRR) are playing an increasingly important role in explaining these phenomena. As CRR are only a few nanometers in size, much information can be gained by imaging studies of glasses at the atomic scale. This thesis employs the atomic resolution capabilities of scanning tunneling microscopy (STM) to study glass surfaces in real-time. Initial experiments on metallic glass surfaces discovered localized two-state dynamics of atomic clusters (2-8 atomic diameters) active even below the glass transition temperature (Tg). Atomic scale evidence of spatial and temporal heterogeneity was acquired. After multiple metallic glass surfaces were shown to exhibit these dynamics, it was proposed to be a universal phenomenon on glass surfaces with similar size distribution in terms of their average weighted diameter. The clusters were also shown to be thermally-activated by studying their temperature behavior. Similar dynamics were discovered on amorphous-silicon, which is an important electronic material, amidst the debate whether or not it is a glass. Further, the two-state dynamics were demonstrated to be quenched after the incorporation of hydrogen during the growth process. Individual CRRs are studied while simultaneously ramping their temperature. The single cluster traces showed marked shifts in the local equilibria illustrating a temperature-sensitive energy landscape. It was deduced that spatial heterogeneity (differences in rates at different sites) is the major contributor to the non-exponential glassy relaxations rather than temporal heterogeneity (differences in

  5. Dynamic Imaging of Surface Motion with a Stereo Borescope

    SciTech Connect

    Michael Berninger, Stuart Baker

    2008-12-11

    A new stereo borescope has been investigated that would provide a time-resolved calibrated method of recording the motion and deformation of a three-dimensional (3-D) surface during explosively driven dynamic shock experiments at the Nevada Test Site. In these experiments, geometries would likely prove to be incompatible with conventional direct optical systems. Single line-of-sight borescopes lack adequate depth-of-field for quantitative imaging of the 3-D surface. To improve depth-of-field and provide time resolution, a stereo borescope has been fabricated for use with a nine-frame framing camera. At one end, stereo optics couple light from the dynamic surface into a pair of flexible 1-mm-diameter correlated fiber-optic bundles. At the other end, small-format lenses (~3 mm) interface with the framing camera, which is set up to simultaneously record the separate-perspective views. All nine frames could be recorded in a period as short as 1.8 μs, and spatial resolution is optimized to 11 line-pairs per mm. To achieve pseudo 3-D depth perception, photogrammetric analysis has been demonstrated with commercial software from ADAM technology (Australia). This paper presents the results from time-resolved stereo images of dynamic surfaces collected in a series of high-explosives experiments at the National Security Technologies, LLC, “Boom Box” in Santa Barbara, CA. Experience with the stereo borescope has suggested other potentially useful stereoscopic applications, such as stereo viewing of moving surfaces on the interiors of engines and the heating of moving components, and the viewing material deposition on interior surfaces during machine operations and fabrication processes.

  6. Demonstration of surface plasmons in metal island films and the effect of the surrounding medium--An undergraduate experiment

    SciTech Connect

    Orfanides, P.; Buckner, T. F.; Buncick, M. C.; Meriaudeau, F.; Ferrell, T. L.

    2000-10-01

    We present a demonstration of the surface plasmon phenomenon as it occurs in thin metal island films. The metal films are deposited on glass microscope slides. The effect of the surface plasmon resonance may be observed visually on the slide without further apparatus. Heating the film changes the shape of the islands and therefore the resonant frequency of the surface plasmon and changes the color of the film. Placing the film in a dielectric medium changes the resonance condition for the surface plasmon again and changes the color again. We show this by coating the slides with commercially available liquids with different indices of refraction. We present a theoretical model that assumes the islands are oblate spheroids. There are enough details given so that the equations can be programed and the theoretical optical absorbance can be reproduced. We also present a modification to the theory so that the shift in resonant frequency can be calculated when the spheroids are immersed in the index fluids. We describe our apparatus for making thin films and our optical spectrometer system. We then present optical absorbance measurements of thin films of both Ag and Au in air and in two liquids with different indices of refraction. (c) 2000 American Association of Physics Teachers.

  7. Dynamic changes in PDMS surface morphology in femtosecond laser treatment.

    PubMed

    Moon, Heh-Young; Sidhu, Mehra S; Lee, Heung Soon; Jeoung, Sae Chae

    2015-07-27

    We have investigated the effect of the dynamics of crater size on the poly(dimethylsiloxane) (PDMS) surface morphology in fs-laser micro-processing. PDMS surface was processed with varying both inter-pulse interval and inter-spot distance between successive laser pulses. With keeping the interval of 5 ms crater shape is round even if the spot is overlapped in space. But decreasing the interval to 0.02 ms the shape of the crater is no longer round. Decreasing the inter-distance between the craters results in roughened surface morphology even at time intervals of 5 ms. Temporal dependence of single-shot fs-laser induced crater size was measured as a function of time delay. Within 0.1 ms after pulse irradiation with a fluence of 4.8 J/cm2 on PDMS surface the crater size has reached to its maximum values and then decreased with a time constant of about 0.3 ms. The surface morphology after fs-laser pulse irradiation is strongly dependent on not only inter-spot distance between successive laser pulse but also their inter-pulse intervals. By proposing a theoretical model on their dynamic features, we will try to explain the current observation in quantitatively. PMID:26367645

  8. Modeling apple surface temperature dynamics based on weather data.

    PubMed

    Li, Lei; Peters, Troy; Zhang, Qin; Zhang, Jingjin; Huang, Danfeng

    2014-01-01

    The exposure of fruit surfaces to direct sunlight during the summer months can result in sunburn damage. Losses due to sunburn damage are a major economic problem when marketing fresh apples. The objective of this study was to develop and validate a model for simulating fruit surface temperature (FST) dynamics based on energy balance and measured weather data. A series of weather data (air temperature, humidity, solar radiation, and wind speed) was recorded for seven hours between 11:00-18:00 for two months at fifteen minute intervals. To validate the model, the FSTs of "Fuji" apples were monitored using an infrared camera in a natural orchard environment. The FST dynamics were measured using a series of thermal images. For the apples that were completely exposed to the sun, the RMSE of the model for estimating FST was less than 2.0 °C. A sensitivity analysis of the emissivity of the apple surface and the conductance of the fruit surface to water vapour showed that accurate estimations of the apple surface emissivity were important for the model. The validation results showed that the model was capable of accurately describing the thermal performances of apples under different solar radiation intensities. Thus, this model could be used to more accurately estimate the FST relative to estimates that only consider the air temperature. In addition, this model provides useful information for sunburn protection management. PMID:25350507

  9. Modeling Apple Surface Temperature Dynamics Based on Weather Data

    PubMed Central

    Li, Lei; Peters, Troy; Zhang, Qin; Zhang, Jingjin; Huang, Danfeng

    2014-01-01

    The exposure of fruit surfaces to direct sunlight during the summer months can result in sunburn damage. Losses due to sunburn damage are a major economic problem when marketing fresh apples. The objective of this study was to develop and validate a model for simulating fruit surface temperature (FST) dynamics based on energy balance and measured weather data. A series of weather data (air temperature, humidity, solar radiation, and wind speed) was recorded for seven hours between 11:00–18:00 for two months at fifteen minute intervals. To validate the model, the FSTs of “Fuji” apples were monitored using an infrared camera in a natural orchard environment. The FST dynamics were measured using a series of thermal images. For the apples that were completely exposed to the sun, the RMSE of the model for estimating FST was less than 2.0 °C. A sensitivity analysis of the emissivity of the apple surface and the conductance of the fruit surface to water vapour showed that accurate estimations of the apple surface emissivity were important for the model. The validation results showed that the model was capable of accurately describing the thermal performances of apples under different solar radiation intensities. Thus, this model could be used to more accurately estimate the FST relative to estimates that only consider the air temperature. In addition, this model provides useful information for sunburn protection management. PMID:25350507

  10. Dynamic surface tension of natural surfactant extract under superimposed oscillations.

    PubMed

    Reddy, Prasika I; Al-Jumaily, Ahmed M; Bold, Geoff T

    2011-01-01

    Surfactant dysfunction plays a major role in respiratory distress syndrome (RDS). This research seeks to determine whether the use of natural surfactant, Curosurf™ (Cheisi Farmaceutici, Parma, Italy), accompanied with pressure oscillations at the level of the alveoli can reduce the surface tension in the lung, thereby making it easier for infants with RDS to maintain the required level of functional residual capacity (FRC) without collapse. To simulate the alveolar environment, dynamic surface tension measurements were performed on a modified pulsating bubble surfactometer (PBS) type device and showed that introducing superimposed oscillations about the tidal volume excursion between 10 and 70 Hz in a surfactant bubble lowers interfacial surface tension below values observed using tidal volume excursion alone. The specific mechanisms responsible for this improvement are yet to be established; however it is believed that one mechanism may be the rapid transient changes in the interfacial area increase the number of interfacial binding sites for surfactant molecules, increasing adsorption and diffusion to the interface, thereby decreasing interfacial surface tension. Existing mathematical models in the literature reproduce trends noticed in experiments in the range of breathing frequencies only. Thus, a modification is introduced to an existing model to both incorporate superimposed pressure oscillations and demonstrate that these may improve the dynamic surface tension in the alveoli. PMID:20883997