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Sample records for metachronous primitive cancers

  1. Metachronous gastric cancer after successful Helicobacter pylori eradication.

    PubMed

    Shiotani, Akiko; Haruma, Ken; Graham, David Y

    2014-09-01

    The high incidence of gastric cancer in Japan initially resulted in establishment of a country-wide gastric cancer screening program to detect early and treatable cancers. In 2013 countrywide Helicobacter pylori (H. pylori) eradication was approved coupled with endoscopy to assess for the presence of chronic gastritis. Current data support the notion that cure of the infection in those with non-atrophic gastritis will prevent development of gastric cancer. However, while progression to more severe damage is halted in those who have already developed, atrophic gastritis/gastric atrophy remain at risk for subsequent development of gastric cancer. That risk is directly related to the extent and severity of atrophic gastritis. Methods to stratify cancer risk include those based on endoscopic assessment of the atrophic border, histologic grading, and non-invasive methods based on serologic testing of pepsinogen levels. Continued surveillance is required because those with atrophic gastritis/gastric atrophy retain considerable gastric cancer risk even after H. pylori eradication. Those who have already experienced a resectable early gastric cancer are among those at highest risk as metachronous lesions are frequent even after H. pylori eradication. We review the role of H. pylori and effect of H. pylori eradication indicating the incidence and the predictive factors on development of metachronous cancer after endoscopic therapy of early gastric cancer. Studies to refine risk markers to stratify for risk, surveillance methods, intervals, and duration after successful H. pylori eradication, and whether adjuvant therapy would change risk are needed. PMID:25206262

  2. Survival impact of locoregional metachronous malignancy in survival of lung cancer patients who received curative treatment

    PubMed Central

    Wen, Chi-Tsung; Fu, Jui-Ying; Wu, Ching-Feng; Hsieh, Ming-Ju; Liu, Yun-Hen; Wu, Yi-Cheng; Tsai, Ying-Huang

    2016-01-01

    Background Metachronous malignancy is also found in the lung cancer population and may be identified before or after diagnosis of lung cancer. No prior studies have documented lung cancer patients with metachronous malignancy and its survival impact in this population. The aim of this study was to try to clarify the survival impact of locoregional metachronous malignancy in the lung cancer population with resectable disease from a pathology point of view. Methods From January 2005 to December 2009, 199 lung cancer patients received curative treatment in Chang Gung Memorial Hospital, of which 34 were identified as having lung cancer and metachronous malignancy and 165 patients as having lung cancer only. Clinico-pathologic factors were collected from the medical records. Differences in clinical presentations between the two groups and survival impact were further analyzed. Results Of these patients, 165 patients (82.9%) had lung cancer only (lung cancer group), and the remaining 34 patients (17.1%) had lung cancer and metachronous malignancy (metachronous malignancy group). There were no significant differences in clinical characteristics between the two groups. The disease free survival (P=0.3199) and overall survival (P=0.71) between these two groups showed no statistically significant difference. Metachronous malignancy only showed survival impact in lung cancer patients with pathologic stage IIIA (P=0.0389). Conclusions Metachronous malignancy is also seen in the lung cancer population and may be identified before or after diagnosis of lung cancer. Locoregional metachronous malignancy has no survival impact on lung cancer patients who receive curative treatment. Anatomic resection with regional lymph node (LN) dissection is recommended if different tumor cell type and resectable disease are confirmed. PMID:27293830

  3. Risk factors for metachronous colorectal cancer following a primary colorectal cancer: A prospective cohort study.

    PubMed

    Jayasekara, Harindra; Reece, Jeanette C; Buchanan, Daniel D; Rosty, Christophe; Dashti, S Ghazaleh; Ait Ouakrim, Driss; Winship, Ingrid M; Macrae, Finlay A; Boussioutas, Alex; Giles, Graham G; Ahnen, Dennis J; Lowery, Jan; Casey, Graham; Haile, Robert W; Gallinger, Steven; Le Marchand, Loic; Newcomb, Polly A; Lindor, Noralane M; Hopper, John L; Parry, Susan; Jenkins, Mark A; Win, Aung Ko

    2016-09-01

    Individuals diagnosed with colorectal cancer (CRC) are at risk of developing a metachronous CRC. We examined the associations between personal, tumour-related and lifestyle risk factors, and risk of metachronous CRC. A total of 7,863 participants with incident colon or rectal cancer who were recruited in the USA, Canada and Australia to the Colon Cancer Family Registry during 1997-2012, except those identified as high-risk, for example, Lynch syndrome, were followed up approximately every 5 years. We estimated the risk of metachronous CRC, defined as the first new primary CRC following an interval of at least one year after the initial CRC diagnosis. Observation time started at the age at diagnosis of the initial CRC and ended at the age at diagnosis of the metachronous CRC, last contact or death whichever occurred earliest, or were censored at the age at diagnosis of any metachronous colorectal adenoma. Cox regression was used to derive hazard ratios (HRs) and 95% confidence intervals (CIs). During a mean follow-up of 6.6 years, 142 (1.81%) metachronous CRCs were diagnosed (mean age at diagnosis 59.8; incidence 2.7/1,000 person-years). An increased risk of metachronous CRC was associated with the presence of a synchronous CRC (HR = 2.73; 95% CI: 1.30-5.72) and the location of cancer in the proximal colon at initial diagnosis (compared with distal colon or rectum, HR = 4.16; 95% CI: 2.80-6.18). The presence of a synchronous CRC and the location of the initial CRC might be useful for deciding the intensity of surveillance colonoscopy for individuals diagnosed with CRC. PMID:27098183

  4. Tumor size is an independent risk predictor for metachronous colorectal cancer

    PubMed Central

    Kato, Takaharu; Alonso, Sergio; Muto, Yuta; Perucho, Manuel; Rikiyama, Toshiki

    2016-01-01

    Non-hereditary colorectal cancer (CRC) patients are at higher risk of developing independent metachronous CRC than cancer-naïve individuals, but the reason is unknown. We studied metachronous CRC risk factors among one thousand five Japanese CRC patients who underwent surgery for CRC. Relative hazard risk of clinical and pathological features was assessed by univariate and multivariate Cox's proportional hazard regression analysis. Observed metachronous CRC incidence was also compared with the expected cancer incidence of the general population in Japan. Twenty-seven metachronous CRCs developed in 24 patients (2.4%) during a follow-up period of 3,676 person-years. Multivariate analysis revealed two factors associated with a high metachronous CRC risk: synchronous CRC (HR = 6.13; p = 1.3×10−4) and tumor size ≥ 6.5 cm (HR = 4.34; p = 1×10−3). Patients with either synchronous or large solitary tumors exhibited a higher risk for metachronous CRC than patients with solitary small tumors (HR = 7.3; p = 4.3×10−6) and that the general Japanese population (SIR = 7.01; p = 3.5×10−9), while patients with solitary small tumors did not (SIR = 1.07; p = 0.8). If patients younger than 60 years were excluded, the observations remained unchanged, with tumor size becoming stronger predictor (HR = 5.67; p = 1.7×10−4) than the presence of synchronous CRC (HR = 5.34; p = 9.6×10−4). Our novel finding that primary tumor size is a strong independent risk factor for metachronous CRC increases the sensitivity of prediction more than twice the presence of synchronous CRC. Our data provides new insights to assess the risk for metachronous lesions that should improve the surveillance regimen for CRC. PMID:26910116

  5. Extracorporeal Membrane Oxygenation Assisted Segmentectomy for Metachronous Lung Cancer After Pneumonectomy.

    PubMed

    Heward, Elliot; Hayes, Tim; Evison, Matthew; Booton, Richard; Barnard, James; Shah, Rajesh

    2016-09-01

    Advances in extracorporeal membrane oxygenation have enabled the facilitation of surgical intervention in patients who may otherwise be considered inoperable using conventional ventilation-for example, the resection of an early stage metachronous lung cancer in a patient who has previously undergone a pneumonectomy for a prior lung cancer. We present one such case: a 52-year-old man who underwent right lower lobe segmentectomy for a second primary lung cancer, 3 years after left pneumonectomy, using extracorporeal membrane oxygenation. To our knowledge, there are no published case reports describing the use of extracorporeal membrane oxygenation in resection of metachronous lung cancer after pneumonectomy. PMID:27549537

  6. Pseudo-Meigs’ syndrome secondary to metachronous ovarian metastases from transverse colon cancer

    PubMed Central

    Kyo, Kennoki; Maema, Atsushi; Shirakawa, Motoaki; Nakamura, Toshio; Koda, Kenji; Yokoyama, Hidetaro

    2016-01-01

    Pseudo-Meigs’ syndrome associated with colorectal cancer is extremely rare. We report here a case of pseudo-Meigs’ syndrome secondary to metachronous ovarian metastases from colon cancer. A 65-year-old female with a history of surgery for transverse colon cancer and peritoneal dissemination suffered from metachronous ovarian metastases during treatment with systemic chemotherapy. At first, neither ascites nor pleural effusion was observed, but she later complained of progressive abdominal distention and dyspnea caused by rapidly increasing ascites and pleural effusion and rapidly enlarging ovarian metastases. Abdominocenteses were repeated, and cytological examinations of the fluids were all negative for malignant cells. We suspected pseudo-Meigs’ syndrome, and bilateral oophorectomies were performed after thorough informed consent. The patient’s postoperative condition improved rapidly after surgery. We conclude that pseudo-Meigs’ syndrome should be included in the differential diagnosis of massive or rapidly increasing ascites and pleural effusion associated with large or rapidly enlarging ovarian tumors. PMID:27182170

  7. Pseudo-Meigs' syndrome secondary to metachronous ovarian metastases from transverse colon cancer.

    PubMed

    Kyo, Kennoki; Maema, Atsushi; Shirakawa, Motoaki; Nakamura, Toshio; Koda, Kenji; Yokoyama, Hidetaro

    2016-05-14

    Pseudo-Meigs' syndrome associated with colorectal cancer is extremely rare. We report here a case of pseudo-Meigs' syndrome secondary to metachronous ovarian metastases from colon cancer. A 65-year-old female with a history of surgery for transverse colon cancer and peritoneal dissemination suffered from metachronous ovarian metastases during treatment with systemic chemotherapy. At first, neither ascites nor pleural effusion was observed, but she later complained of progressive abdominal distention and dyspnea caused by rapidly increasing ascites and pleural effusion and rapidly enlarging ovarian metastases. Abdominocenteses were repeated, and cytological examinations of the fluids were all negative for malignant cells. We suspected pseudo-Meigs' syndrome, and bilateral oophorectomies were performed after thorough informed consent. The patient's postoperative condition improved rapidly after surgery. We conclude that pseudo-Meigs' syndrome should be included in the differential diagnosis of massive or rapidly increasing ascites and pleural effusion associated with large or rapidly enlarging ovarian tumors. PMID:27182170

  8. Successful Endoscopic Resection in a Case of Ectopic and Metachronous Quintuple Gastric Cancers.

    PubMed

    Deguchi, Ryuzo; Shiraishi, Koichi; Arase, Yoshitaka; Dekiden, Makiko; Shimada, Hideo; Nitta, Miho; Myoujin, Kazunori; Tamiya, Shiho; Sato, Shinkichi; Mine, Tetsuya

    2015-12-01

    A 71-year-old man was referred to us from another hospital for endoscopic treatment of a IIc lesion at the anterior wall of the lower body of the stomach. In November 2008, he underwent resection of this lesion with endoscopic submucosal dissection (ESD). Follow-up endoscopy revealed a IIc lesion in the posterior wall of the lower body of the stomach, and ESD was again performed in February 2009. At the same time, Helicobacter pylori was detected, and successful first-line eradication therapy was verified in May 2009. Subsequent follow-up endoscopy detected multiple ectopic and metachronous gastric cancers at three sites, all of which were endoscopically resected (quintuple gastric cancer). Although ectopic and metachronous recurrence of gastric cancer was detected immediately after H. pylori eradication, recurrence of gastric cancer has not been detected in the 5 years since eradication. Future directions include determining the time point at which the preventative effects of H. pylori eradication therapy appear against gastric cancer recurrence. We report our findings herein, along with a review of the related literature. PMID:26662668

  9. Characteristics and Survival of Breast Cancer Patients with Multiple Synchronous or Metachronous Primary Cancers

    PubMed Central

    Lee, Janghee; Kim, Sanghwa; Kim, Jeeye; Ryu, Jegyu; Park, Hyung Seok; Kim, Seung Il; Park, Byeong-Woo

    2015-01-01

    Purpose Newly developed extra-mammary multiple primary cancers (MPCs) are an issue of concern when considering the management of breast cancer survivors. This study aimed to investigate the prevalence of MPCs and to evaluate the implications of MPCs on the survival of breast cancer patients. Materials and Methods A total of 8204 patients who underwent surgery at Severance Hospital between 1990 and 2012 were retrospectively selected. Clinicopathologic features and survival over follow-up periods of ≤5 and >5 years were investigated using univariate and multivariate analyses. Results During a mean follow-up of 67.3 months, 962 MPCs in 858 patients (10.5%) were detected. Synchronous and metachronous MPCs were identified in 23.8% and 79.0% of patients, respectively. Thyroid cancer was the most prevalent, and the second most common was gynecologic cancer. At ≤5 years, patients with MPCs were older and demonstrated significantly worse survival despite a higher proportion of patients with lower-stage MPCs. Nevertheless, an increased risk of death in patients with MPCs did not reach statistical significance at >5 years. The causes of death in many of the patients with MPCs were not related to breast cancer. Stage-matched analysis revealed that the implications of MPCs on survival were more evident in the early stages of breast disease. Conclusion Breast cancer patients with MPCs showed worse survival, especially when early-stage disease was identified. Therefore, it is necessary to follow screening programs in breast cancer survivors and to establish guidelines for improving prognosis and quality of life. PMID:26256962

  10. Synchronous and metachronous malignancy in endometrial cancer patients treated in a tertiary care center of Thailand

    PubMed Central

    Khunnarong, Jakkapan; Srijaipracharoen, Sunamchok

    2015-01-01

    Objective To evaluate the prevalence and features of non-endometrial cancers in Thai endometrial cancer (EC) patients. Methods EC patients treated in our institution were identified and the following data were collected: age, EC stage, histopathology, adjuvant therapy, other cancers, living status, and cause of death. Results The mean age of the 344 patients was 56.8±10.8 years. Fifty (14.5%) had other synchronous and metachronous cancers. Mean ages of the patients with or without other cancers were not significantly different, 55.7±10.04 years versus 57.1±11.0 years, respectively (p=0.358). History of any cancer in the family and tumor in the lower uterine segment were more frequent among the patients with other cancers (6.0% vs. 1.7%, p=0.095; 12.0% vs. 1.0%, p<0.001; respectively). Six patients had ≥2 other cancers. Ovarian, breast, and colon were the three most common other cancers. After a median follow-up of 57.1 months, 18.3% of patients had died: 30.0% of patients with other cancers and 16.3% of those without other cancers. The corresponding EC deaths were 14.0% and 11.2%. The 5-year overall survival was significantly lower in patients who had other cancers: 79.3% (95% confidence interval [CI], 68.3 to 90.3) vs. 86.0% (95% CI, 81.7 to 90.3) than in those without (p=0.023). However, the corresponding disease-specific survival was not significantly different: 85.1% (95% CI, 75.5 to 94.7) compared with 89.0% (95% CI, 85.1 to 92.9), respectively (p=0.514). Conclusion Thai EC patients had a high incidence of other cancers. Overall survival of EC patients who had other cancers was worse than those without, while disease-specific survival was not significantly different. PMID:26197770

  11. Serum pepsinogen levels can quantify the risk of development of metachronous gastric cancer after endoscopic resection.

    PubMed

    Iguchi, Mikitaka; Kato, Jun; Yoshida, Takeichi; Yamamoto, Yasuhide; Nakachi, Kenichiro; Fukatsu, Kazuhiro; Mori, Yoshiyuki; Maeda, Yoshimasa; Moribata, Kosaku; Shingaki, Naoki; Niwa, Toru; Deguchi, Hisanobu; Inoue, Izumi; Maekita, Takao; Tamai, Hideyuki; Ichinose, Masao

    2016-09-01

    We have previously reported that serum pepsinogen (PG) can quantify the level of gastric mucosal atrophy, and that H. pylori eradication reduces cancer development in subjects with mild atrophy identified by serum PG levels. The aim of this study was to elucidate the predictive ability of serum PG levels for the development of metachronous gastric cancer (MGC) after endoscopic resection (ER) of primary cancer in association with H. pylori eradication. A retrospective chart review was performed, and 330 patients who underwent ER for initial early gastric cancer were enrolled. Presence or absence of H. pylori, serum PG levels, and endoscopic atrophy at ER were evaluated. H. pylori eradication was performed at the patient's request after ER. The incidence of MGC in these patients was analyzed. Of 330 patients, 47 developed MGC. Endoscopic extensive atrophy was observed more frequently in patients with MGC (p = 0.001). Although PG I or PG II alone did not significantly differ according to development of MGC, the proportion of PG I/II ≤ 3.0, which is one of the criteria of PG test-positive, was significantly higher in patients with MGC (83 vs. 69%, p = 0.04). H. pylori eradication after ER did not affect MGC development (p = 0.2). On multivariate analysis, serum PG I/II ratio ≤ 3.3 was significantly associated with the development of MGC (hazard ratio: 3.66, 95% confidence interval: 1.47-12.25, p = 0.004). The risk of MGC after ER could be quantitatively predicted by the PG I/II ratio regardless of H. pylori status. PMID:27083518

  12. Colorectal Cancer With Multiple Metachronous Metastasis Achieving Complete Remission 14 Years After Surgical Resection: Report of a Case

    PubMed Central

    Murono, Koji; Kawai, Kazushige; Kazama, Shinsuke; Tsuno, Nelson H.; Sunami, Eiji; Kitayama, Joji; Watanabe, Toshiaki

    2013-01-01

    A 63-year-old man underwent a colectomy for sigmoid colon cancer in 1997. The upper lobe of his left lung and his left adrenal gland were resected because of metachronous metastases, 7 and 10 years after the initial surgery, respectively. Recurrence of metastases to the middle lobe of the right lung and left adrenal gland were sequentially detected in 2007, and a multimodal therapy, consisting of the combination of radiotherapy and chemotherapy, was conducted since 2007. The chemotherapy included drugs such as FOLFOX, FOLFIRI, bevacizumab, capecitabine, and cetuximab. In 2011, the complete response of all metastatic lesions could be achieved, and no recurrence was detected for more than 1 year. In spite of repeated recurrences, by the combination of surgical resection, chemotherapy, and radiotherapy, the complete response could be achieved 14 years after the initial surgical resection, which can be attributed to the development of new treatment modalities and new agents for colorectal cancer. PMID:23438276

  13. Metachronous pancreatic cancer originating from disseminated founder pancreatic intraductal neoplasias (PanINs).

    PubMed

    Imai, Koji; Karasaki, Hidenori; Ono, Yusuke; Sasajima, Junpei; Chiba, Shin-Ichi; Funakoshi, Hiroshi; Muraki, Miho; Hanaoka, Hideki; Furukawa, Takahisa; Furukawa, Hiroyuki; Kono, Toru; Nagashima, Kazuo; Mizukami, Yusuke

    2015-04-01

    Clonal populations originated from benign-looking 'founder cells' may spread widely within pancreas instead of being localized in situ before frank pancreatic ductal adenocarcinoma (PDA) can be detected. Metachronous PDA is not common event, and we here sought to define potent origin of multiple PDAs developed in a woman using advanced genetics technologies. Curative resection of pancreatic head tumour was performed; however, 'recurrent' lesions in the remnant pancreas were found 3.5 years later and total pancreatectomy was subsequently performed. The metachronous lesions were morphologically similar to the primary PDA. Using a next-generation sequencing and digital PCR, all three PDAs were shown to possess rare somatic mutations in KRAS (p.T58I & p.Q61H). Curiously, identical KRAS mutations were found in low-grade 'intraepithelial' lesions, which localized in normal area of the pancreas and one of them possessed p53 mutation, which was also found in the PDAs. The footprint of the tumour evolution marked by mutational profiling supports a human correlate to the mouse models of 'dissemination' occurring at the earliest stages of pancreatic neoplasia. PMID:27499895

  14. Metachronous pancreatic cancer originating from disseminated founder pancreatic intraductal neoplasias (PanINs)

    PubMed Central

    Imai, Koji; Karasaki, Hidenori; Ono, Yusuke; Sasajima, Junpei; Chiba, Shin‐ichi; Funakoshi, Hiroshi; Muraki, Miho; Hanaoka, Hideki; Furukawa, Takahisa; Furukawa, Hiroyuki; Kono, Toru; Nagashima, Kazuo

    2015-01-01

    Abstract Clonal populations originated from benign‐looking ‘founder cells' may spread widely within pancreas instead of being localized in situ before frank pancreatic ductal adenocarcinoma (PDA) can be detected. Metachronous PDA is not common event, and we here sought to define potent origin of multiple PDAs developed in a woman using advanced genetics technologies. Curative resection of pancreatic head tumour was performed; however, ‘recurrent' lesions in the remnant pancreas were found 3.5 years later and total pancreatectomy was subsequently performed. The metachronous lesions were morphologically similar to the primary PDA. Using a next‐generation sequencing and digital PCR, all three PDAs were shown to possess rare somatic mutations in KRAS (p.T58I & p.Q61H). Curiously, identical KRAS mutations were found in low‐grade ‘intraepithelial' lesions, which localized in normal area of the pancreas and one of them possessed p53 mutation, which was also found in the PDAs. The footprint of the tumour evolution marked by mutational profiling supports a human correlate to the mouse models of ‘dissemination' occurring at the earliest stages of pancreatic neoplasia.

  15. Metachronous primary uterine cancer surgically resected during Crizotinib treatment in a ALK-rearranged advanced lung adenocarcinoma

    PubMed Central

    Misino, Andrea; Scattone, Anna; Caldarola, Lucia; Petroni, Stella; Logroscino, Antonio; Montagna, Elisabetta Sara; Serio, Gabriella; Simone, Giovanni; Galetta, Domenico

    2016-01-01

    Rearrangements of the anaplastic lymphoma kinase (ALK) gene are present in 3% to 7% of non-small-cell lung cancers (NSCLCs). Patients harboring ALK rearrangements show very favourable outcomes if treated with targeted agents, among which crizotinib is the first and best studied. Crizotinib, an oral small-molecule tyrosine kinase inhibitor of ALK, MET, and ROS1 kinases, is a very active and well tolerated drug. Nevertheless, the optimal therapy management with this new drug is still partially unknown, especially with regard to the safety of combined treatments. Recently, the integration of locoregional treatments has been proposed as a feasible multimodality strategy in selected patients with good clinical conditions and slow-growing or oligoprogressive disease. In this report, a case of advanced lung adenocarcinoma, progressed after first line chemotherapy and re-biopsied detecting ALK rearrangement, is described. During crizotinib treatment the primary lung tumor showed an excellent regression; meanwhile a major surgery for a metachronous uterine cancer was safely and successfully carried out. PMID:26958511

  16. Prior Adjuvant Tamoxifen Treatment in Breast Cancer Is Linked to Increased AIB1 and HER2 Expression in Metachronous Contralateral Breast Cancer

    PubMed Central

    Alkner, Sara; Bendahl, Pär-Ola; Ehinger, Anna; Lövgren, Kristina; Rydén, Lisa; Fernö, Mårten

    2016-01-01

    Aim The estrogen receptor coactivator Amplified in Breast Cancer 1 (AIB1) has been associated with an improved response to adjuvant tamoxifen in breast cancer, but also with endocrine treatment resistance. We hereby use metachronous contralateral breast cancer (CBC) developed despite prior adjuvant tamoxifen for the first tumor as an “in vivo”-model for tamoxifen resistance. AIB1-expression in the presumable resistant (CBC after prior tamoxifen) and naïve setting (CBC without prior tamoxifen) is compared and correlated to prognosis after CBC. Methods From a well-defined population-based cohort of CBC-patients we have constructed a unique tissue-microarray including >700 patients. Results CBC developed after adjuvant tamoxifen more often had a HER2-positive/triple negative-subtype and a high AIB1-expression (37% vs. 23%, p = 0.009), than if no prior endocrine treatment had been administered. In patients with an estrogen receptor (ER) positive CBC, a high AIB1-expression correlated to an inferior prognosis. However, these patients seemed to respond to tamoxifen, but only if endocrine therapy had not been administered for BC1. Conclusions Metachronous CBC developed after prior endocrine treatment has a decreased ER-expression and an increased HER2-expression. This is consistent with endocrine treatment escape mechanisms previously suggested, and indicates metachronous CBC to be a putative model for studies of treatment resistance “in vivo”. The increased AIB1-expression in CBC developed after prior tamoxifen suggests a role of AIB1 in endocrine treatment resistance. In addition, we found indications that the response to tamoxifen in CBC with a high AIB1-expression seem to differ depending on previous exposure to this drug. A different function for AIB1 in the tamoxifen treatment naïve vs. resistant setting is suggested, and may explain previously conflicting results where a high AIB1-expression has been correlated to both a good response to adjuvant

  17. A case of metachronous double primary neuroendocrine cancer in pancreas/ileum and uterine cervix

    PubMed Central

    Buccoliero, Anna Maria; Novelli, Luca; Sansovini, Maddalena; Severi, Stefano; Pieralli, Annalisa; Livi, Lorenzo; Fambrini, Massimiliano

    2012-01-01

    We describe an unusual case of a 50-year-old female patient developing two primary cancers with neuroendocrine features. Initially the patient underwent surgery for an entero-pancreatic neuroendocrine carcinoma. During the subsequent follow-up she experienced some episodes of vaginal bleeding with negative PET scanning with the tracer fluorine-18 (F-18) fluorodeoxyglucose (FDG). A Papanicolaou (pap) smear and an endometrial biopsy revealed a primary neuroendocrine cancer of the uterine cervix. The present case underlines the importance of clinical follow-up after a diagnosis of intestinal neuroendocrine tumor, investigating any new symptom. Female patients, after the diagnosis of entero-pancreatic neuroendocrine carcinoma, must be recommended to continue screening pap test examinations for the likelihood of classical squamous and glandular cervical cancers and also for neuroendocrine cervical cancer. PMID:23009225

  18. [A Case of Long-Term Survival after Surgeries for Gastric Cancer and Metachronous Ovarian Metastasis].

    PubMed

    Yoshida, Tatsuya; Wajima, Naoki; Akasaka, Harue; Sakuraba, Shingo; Muroya, Takahiro; Kubo, Norihito; Okano, Kensuke; Uchida, Chiaki; Hakamada, Kenichi

    2015-11-01

    The patient was a 57-year-old woman. In October 2011, she underwent distal gastrectomy, D2 lymphadenectomy, and Roux-en-Y reconstruction for gastric cancer (pT4a, pN3b, Stage ⅢC [JCGC 14th Edition]). She then received S-1 plus CDDP combination therapy and S-1 monotherapy as postoperative adjuvant chemotherapies for 1 year, and was followed up as an outpatient. In April 2013, a significant increase in the CA19-9 level was noted, and CT indicated a right ovarian tumor. Ovarian metastasis from the gastric cancer was diagnosed, and the response to 3 courses of weekly PTX was stable disease. No findings indicated metastasis to other organs. In July 2013, a salpingo-oophorectomy was performed, after which her CA19-9 level returned to the normal range. Follow-up was adopted as the postoperative strategy in part due to the desires of the patient. Presently, 3 years and 6 months after the initial surgery and 1 year and 9 months after the last surgery, no recurrence has been detected. Generally, ovarian metastasis from gastric cancer is considered to be associated with a poor prognosis. However, our patient showed long-term survival after surgeries for gastric cancer and asynchronous ovarian metastasis. Here, we report the details of our case and review the relevant literature. PMID:26805246

  19. Metachronous Second Primary Malignancies after Head and Neck Cancer in a Korean Cohort (1993-2010)

    PubMed Central

    Jung, Yuh-S; Lim, Jiwon; Jung, Kyu-Won; Ryu, Junsun; Won, Young-Joo

    2015-01-01

    Second primary malignancy (SPM) is the major long-term cause of patient mortality with head and neck squamous cell carcinoma (HNSCC). As the incidence of high-risk human papillomavirus (HPV)-related HNSCC is increasing globally, we analyzed the patterns of SPM occurrence, the effect of the index tumor site along with attributes to HPV, and the effect of SPM on survival in South Korean patients with head and neck cancer (HNC). Data were retrieved from the Korea Central Cancer Registry, a nationwide population-based cancer registry, from 1993 to 2010. Standardized incidence ratios were analyzed and compared between index tumor sites, particularly oropharyngeal vs. non-oropharyngeal sites. After adjustment for competing risks, 3- and 5-year SPM rates were calculated using the cumulative incidence function. The effects of SPM occurrence on overall survival (OS) were then analyzed. SPM rates were significantly lower for HPV-attributable oropharyngeal sites than for non-oropharyngeal sites, such as the larynx and hypopharynx (p<0.001). SPM rates were also lower for oral cavity first primary sites than for non-oropharyngeal first primary sites (p<0.001). SPMs typically occurred in the esophagus, lungs and the head and neck. Uterine cervical cancers occurred significantly more frequently after index oropharyngeal cancer in women. The 5-year and 10-year OS rates were 57.8 and 45.7% in all HNC patients, respectively. The OS after SPM occurrence was poor (5-year, 31.8%; 10-year, 20.8%) compared to after index HNC occurrence (5-year, 68.4%; 10-year, 41.2%). SPM occurrence in the esophagus and lung/bronchus showed a worse OS than SPM localized to the head and neck. South Korean HNC patient, the first primary cancer site affected SPM risk and distribution. The 5- and 10-year OS rates deteriorated after SPM occurrence, particularly in the esophagus and lungs. Further optimization of follow-up strategies for effective surveillance of SPM, particularly in the esophagus and lungs

  20. Metachronous, Single Metastasis to the Parotid, from Primary Breast Cancer: A Case Report and Review of the Literature

    PubMed Central

    Kmeid, Michel; Kamar, François G.; Nasser, Selim; Moukarzel, Nabil

    2016-01-01

    Background. The parotid gland is an unusual site for metastatic disease and when metastasis occurs, it commonly originates from head and neck primaries. Spread from distant infraclavicular sites such as the breast, into the parotid, is even more unusual with very few cases reported in the literature. Case Report. We describe the case of a 65-year-old woman presenting for a rapidly enlarging right parotid mass. She had a history of an invasive ductal carcinoma of the right breast and was disease-free in the past 6 years prior to her presentation. She was thereafter diagnosed as having a solitary parotid metastasis from breast origin. A total parotidectomy was done and she was referred for adjuvant radiotherapy. Conclusion. Any parotid metastasis should be investigated, especially in patients with a prior history of cancer where the possibility of metastasis, even if improbable, should be kept in mind. Fine needle aspiration biopsy (FNAB) is the first diagnostic procedure to be done and immunocytochemistry can provide valuable information even if it is not always needed for diagnosis. Superficial parotidectomy when feasible with adjuvant radiotherapy is the preferred approach for solitary metastasis of the parotid. The prognosis, however, remains poor regardless of the treatment modality used. PMID:26942028

  1. Systemic treatment of patients with metachronous peritoneal carcinomatosis of colorectal origin

    PubMed Central

    van Oudheusden, T. R.; Razenberg, L. G.; van Gestel, Y. R.; Creemers, G. J.; Lemmens, V. E.; de Hingh, I. H.

    2015-01-01

    Combining chemotherapy and targeted therapies has resulted in an enhanced survival in metastatic colorectal cancer (mCRC) patients. However, the result of this palliative treatment in patients with metachronous peritoneal carcinomatosis (PC) remains unknown. The current population-based study aims to investigate the use and effect of palliative systemic treatment in patients with metachronous PC of colorectal origin. Data on metachronous PC were collected between 2010 and 2011 for all patients who were diagnosed with M0 colorectal cancer between 2003 and 2008 in the Dutch Eindhoven Cancer Registry. Patient demographics and detailed data on chemotherapeutic treatment were collected and compared. Ninety-two patients with metachronous PC received chemotherapy in a palliative setting compared to 94 patients without treatment. In 36 patients, Bevacizumab was added to the treatment (39%). Overall survival was 3.4, 13, and 20.3 months in the no treatment, systemic treatment and systemic treatment + Bevacizumab respectively (P < 0.001). Male gender was a positive predictor and right sided primary tumor location a negative predictor of receiving bevacizumab. Approximately 40% of patients with metachronous PC received bevacizumab in addition to chemotherapy. Treatment with systemic chemotherapy in combination with bevacizumab may increase survival in a patients with metachronous colorectal PC. PMID:26686250

  2. Optimality of Metachronal Paddling in Crustacean Swimming

    NASA Astrophysics Data System (ADS)

    Guy, Robert; Zhang, Calvin; Lewis, Timothy

    2014-11-01

    Crayfish and other long-tailed crustaceans swim by rhythmically moving four or five pairs of limbs. Despite variations in limb size and stroke frequency, movements of ipsilateral limbs always maintain a tail-to-head metachronal rhythm with an approximate quarter-period inter-limb phase difference. Relatively few studies have examined the fluid dynamics of metachronal limb stroke for the range of Reynolds numbers at which crustaceans operate. Here, we use a computational fluid dynamics model to explore the performance of different paddling rhythms. We show that the natural tail-to-head metachronal rhythm with an approximate quarter-period phase difference is the most effective and efficient rhythm across a wide range of Reynolds numbers.

  3. Quantum Primitives

    NASA Astrophysics Data System (ADS)

    Spring, Joseph

    2009-04-01

    We explore possible characterisations of entanglement classes which may be interpreted as gates acting on globally distributed systems. The cyclic nature of a selection of entanglement gates, primitives, is explored commencing with gates for generating Bell, GHZ and W states.

  4. Case of metachronous bilateral isolated adrenal metastasis from colorectal adenocarcinoma and review of the literature.

    PubMed

    Liu, Yu-Yi; Chen, Zhi-Hui; Zhai, Er-Tao; Yang, Jie; Xu, Jian-Bo; Cai, Shi-Rong; Song, Wu

    2016-04-14

    Rarely has a solitary, metachronous bilateral adrenal metastasis of colorectal cancer been reported. We depict a 41-year-old man who underwent sigmoid colon cancer radical surgery followed by adjuvant chemotherapy for a locally ulcerative sigmoid adenocarcinoma with metachronous bilateral adrenal metastasis revealed by a computed tomography scan. Histopathological examination showed adenocarcinoma, compatible with metastasis from the rectal cancer. The level of serum carcinoembryonic antigen had indicative significance for the presence of adrenal metastasis in the reported series. We performed a literature analysis related to this pathological characteristic and attach importance to consistent, vigilant radiological surveillance of the adrenal glands in the patients' follow up for colorectal cancer with or without subsequent adrenal metastasis. PMID:27076775

  5. Case of metachronous bilateral isolated adrenal metastasis from colorectal adenocarcinoma and review of the literature

    PubMed Central

    Liu, Yu-Yi; Chen, Zhi-Hui; Zhai, Er-Tao; Yang, Jie; Xu, Jian-Bo; Cai, Shi-Rong; Song, Wu

    2016-01-01

    Rarely has a solitary, metachronous bilateral adrenal metastasis of colorectal cancer been reported. We depict a 41-year-old man who underwent sigmoid colon cancer radical surgery followed by adjuvant chemotherapy for a locally ulcerative sigmoid adenocarcinoma with metachronous bilateral adrenal metastasis revealed by a computed tomography scan. Histopathological examination showed adenocarcinoma, compatible with metastasis from the rectal cancer. The level of serum carcinoembryonic antigen had indicative significance for the presence of adrenal metastasis in the reported series. We performed a literature analysis related to this pathological characteristic and attach importance to consistent, vigilant radiological surveillance of the adrenal glands in the patients’ follow up for colorectal cancer with or without subsequent adrenal metastasis. PMID:27076775

  6. Primitive Clay.

    ERIC Educational Resources Information Center

    Chorches, Joan

    A five-week unit providing first hand experience with primitive ceramic techniques is described in this curriculum guide, which includes course goals and objectives, a daily schedule of class activities, and handouts for students. The unit features construction of a sawdust kiln as a group problem-solving activity; students work in groups…

  7. Emergence of metachronal waves in cilia arrays

    PubMed Central

    Elgeti, Jens; Gompper, Gerhard

    2013-01-01

    Propulsion by cilia is a fascinating and universal mechanism in biological organisms to generate fluid motion on the cellular level. Cilia are hair-like organelles, which are found in many different tissues and many uni- and multicellular organisms. Assembled in large fields, cilia beat neither randomly nor completely synchronously—instead they display a striking self-organization in the form of metachronal waves (MCWs). It was speculated early on that hydrodynamic interactions provide the physical mechanism for the synchronization of cilia motion. Theory and simulations of physical model systems, ranging from arrays of highly simplified actuated particles to a few cilia or cilia chains, support this hypothesis. The main questions are how the individual cilia interact with the flow field generated by their neighbors and synchronize their beats for the metachronal wave to emerge and how the properties of the metachronal wave are determined by the geometrical arrangement of the cilia, like cilia spacing and beat direction. Here, we address these issues by large-scale computer simulations of a mesoscopic model of 2D cilia arrays in a 3D fluid medium. We show that hydrodynamic interactions are indeed sufficient to explain the self-organization of MCWs and study beat patterns, stability, energy expenditure, and transport properties. We find that the MCW can increase propulsion velocity more than 3-fold and efficiency almost 10-fold—compared with cilia all beating in phase. This can be a vital advantage for ciliated organisms and may be interesting to guide biological experiments as well as the design of efficient microfluidic devices and artificial microswimmers. PMID:23487771

  8. Emergence of metachronal waves in cilia arrays.

    PubMed

    Elgeti, Jens; Gompper, Gerhard

    2013-03-19

    Propulsion by cilia is a fascinating and universal mechanism in biological organisms to generate fluid motion on the cellular level. Cilia are hair-like organelles, which are found in many different tissues and many uni- and multicellular organisms. Assembled in large fields, cilia beat neither randomly nor completely synchronously--instead they display a striking self-organization in the form of metachronal waves (MCWs). It was speculated early on that hydrodynamic interactions provide the physical mechanism for the synchronization of cilia motion. Theory and simulations of physical model systems, ranging from arrays of highly simplified actuated particles to a few cilia or cilia chains, support this hypothesis. The main questions are how the individual cilia interact with the flow field generated by their neighbors and synchronize their beats for the metachronal wave to emerge and how the properties of the metachronal wave are determined by the geometrical arrangement of the cilia, like cilia spacing and beat direction. Here, we address these issues by large-scale computer simulations of a mesoscopic model of 2D cilia arrays in a 3D fluid medium. We show that hydrodynamic interactions are indeed sufficient to explain the self-organization of MCWs and study beat patterns, stability, energy expenditure, and transport properties. We find that the MCW can increase propulsion velocity more than 3-fold and efficiency almost 10-fold--compared with cilia all beating in phase. This can be a vital advantage for ciliated organisms and may be interesting to guide biological experiments as well as the design of efficient microfluidic devices and artificial microswimmers. PMID:23487771

  9. Metachronous Primary Adenocarcinoma of Lung During Adjuvant Imatinib Mesylate Therapy for Gastrointestinal Stromal Tumor of Stomach

    PubMed Central

    Jiang, Meng-jie; Weng, Shan-Shan; Cao, Ying; Li, Xiao-Fen; Wang, Liu-Hong; Xu, Jing-Hong; Yuan, Ying

    2015-01-01

    Abstract Gastrointestinal stromal tumor (GIST) is the most common mesenchymal tumor in gastrointestinal tracts; however, the synchronous or metachronous coexistence of GIST with additional primary malignancy is not common. Here, we present an unusual case of gastric GIST with metachronous primary lung adenocarcinoma diagnosed during his adjuvant treatment with oral receptor tyrosine kinase inhibitor imatinib mesylate (400 mg daily). After 6-month use of imatinib, the patient suffered from dry cough and dyspnea. Subsequent lung biopsy demonstrated adenocarcinoma with diffuse interstitial changes. Our research emphasizes the possibility of an additional primary tumor with GIST, and reminds the clinicians to strengthen the surveillance of the additional cancer during the follow-up of GIST patients. PMID:26356712

  10. Metachronous Bilateral Extremity Soft Tissue Sarcomas

    PubMed Central

    Nowrasteh, Ghodratollah; Aziz, Tanim; Assas, Mohammed Al; Nuaimi, Lateefa Al; Marzouqi, Saeeda; Quadri, Asif A.M.; Alrawi, Sadir

    2016-01-01

    Case series Patient: Male, 44 • Male, 58 Final Diagnosis: Soft tissue sarcomas Symptoms: Discomfort • swelling Medication: — Clinical Procedure: Image guided biopsy • metastatic work up • neoadjuvant radiotherapy • radical resection Specialty: Surgery Objective: Rare disease Background: Soft tissue sarcomas (STS) account for approximately 1% of adult malignancies, with 50 to 60% occurring in the extremities. Liposarcoma is the most common type of STS and represent about 20% of total adult sarcomas. There are rare syndromes associated with increased risk of developing STS. Further, chemical compounds such as chlorinated phenols and a few chemotherapeutic drugs have been linked to STS, along with ionizing radiation. Nevertheless, the etiology is uncertain for most of these lesions. Case Report: This report details 2 cases of metachronous bilateral STS of the lower extremities. The first of these presented as a local recurrence of a previously resected right thigh liposarcoma and a new liposarcoma in the left thigh. As mentioned above, among the different subtypes of STS, liposarcoma has the highest tendency for multifocality. The second patient had multifocal metachronous leiomyosarcoma with lung metastases occurring simultaneously with the second presentation. Leiomyosarcoma is another subtype reported to present with multi-focal disease. Conclusions: Despite the rarity of bilateral lesions, their occurrence should not be overlooked in the initial diagnosis and follow-up of the initially detected tumor. Early detection can affect patient survival because their presence predicts unfavorable outcomes. PMID:26744032

  11. Peripheral primitive neuroectodermal tumor of the dura in a 51-year-old woman following intensive treatment for breast cancer

    PubMed Central

    Cole, Marion; Parajuli, Shobha; Laske, Douglas; Goldstein, Lori; Morrison, Tara; Mukherjee, Abir; Tumelty, Kathryn; Tetzlaff, Eric; von Mehren, Margaret; Inniss, Susan

    2014-01-01

    Patient: Female, 51 Final Diagnosis: Ewing sarcoma Symptoms: Visual disturbances Medication: — Clinical Procedure: — Specialty: Oncology Objective: Rare disease Background: Primitive neuroectodermal tumor/Ewing sarcoma (PNET/EWS) is a round blue cell sarcoma that shows varying degrees of neuroectodermal differentiation. PNET/EWS as a primary intracranial tumor is extremely uncommon. Case Report: We report a unique case of peripheral PNET presenting as an intracranial mass in an adult following chemotherapy and radiotherapy for a solid tumor. A 51-year-old woman with previously treated left breast cancer was evaluated for a newly developed brain mass. She underwent craniotomy with resection. Surgical pathology was consistent with a peripheral PNET/EWS with Ewing sarcoma gene translocation. She was treated appropriately with vincristine, cyclophosphamide, and doxorubicin (later dactinomycin) alternating with ifosfamide and etoposide. Conclusions: Although development of PNET/EWS presenting along the CNS is exceedingly rare in adults, establishing the proper diagnosis of this “small blue cell tumor” is critical. The further distinction between central PNET and peripheral PNET can greatly impact both prognosis and treatment. Our case also highlights the importance of considering the impact of prior intensive therapies, including radiation and chemotherapy, on predisposing to future PNET/EWS. PMID:25045413

  12. Metachronous tubulovillous and tubular adenomas of the anal canal.

    PubMed

    Nozawa, Hiroaki; Ishihara, Soichiro; Morikawa, Teppei; Tanaka, Junichiro; Yasuda, Koji; Ohtani, Kensuke; Nishikawa, Takeshi; Tanaka, Toshiaki; Kiyomatsu, Tomomichi; Kawai, Kazushige; Hata, Keisuke; Kazama, Shinsuke; Yamaguchi, Hironori; Sunami, Eiji; Kitayama, Joji; Fukayama, Masashi; Watanabe, Toshiaki

    2015-01-01

    Anal canal adenoma is an extremely rare disease that has the potential to transform into a malignant tumor. We herein presented a rare case of metachronous multiple adenomas of the anal canal. A 48-year-old woman underwent total colonoscopy following a positive fecal blood test. A 9-mm villous polyp arising from the posterior wall of the anal canal was removed by snare polypectomy. Histologically, the tumor was tubulovillous adenoma with high-grade dysplasia and the cut end was negative for tumor cells. Six years later, an elevated lesion, macroscopically five millimeters in size, was detected in the left wall of the anal canal in a follow-up colonoscopy. Local excision of the tumor was performed, and the lesion was pathologically confirmed to be tubular adenoma with high-grade dysplasia limited to the mucosa. The patient is currently alive without any evidence of recurrence for six months after surgery. Although she had a past history of cervical cancer, the multiple tumors arising in the anal canal were unlikely to be related to human papilloma virus infection. Our case report underscores the importance of careful observations throughout colonoscopy to detect precancerous lesions, particularly in anatomically narrow segments. PMID:26249723

  13. On metachronism in ciliary systems: a model describing the dependence of the metachronal wave properties on the intrinsic ciliary parameters.

    PubMed

    Gheber, L; Priel, Z

    1990-01-01

    A mathematical model is proposed to explain the dependence of the direction and the length of the metachronal wave on parameters that characterize the ciliary beat, the dimensions of the cilia, and the geometry of their arrangement on the ciliated surface. The metachronal wave is decomposed into two mutually perpendicular components, which are chosen in such a way that the direction of one of them is in the direction of the effective stroke. The magnitudes of the two components are determined by using the concept of the time of delay between adjacent cilia. The properties of the metachronal wave are then calculated as a function of the ciliary parameters. The results obtained with the present model predict that the direction of the wave propagation is strongly dependent on the type of metachronism in the direction of the effective stoke and the polarization in time and in space of the ciliary beat. The metachronal wavelength is found to depend on four parameters: the ciliary length, the angle of the arc projected on the cell surface by the ciliary tip during the recovery stroke, the degree of asymmetry of ciliary beat, and the portion of the cycle occupied by the pause. The metachronal wavelength is also found to be only weakly dependent on the ciliary frequency. At this stage there exists relatively little experimental information with which to characterize fully the metachronal properties of ciliary systems. Even when only partial information exists, the model allows prediction, to within a certain range, of the direction of the wave propagation. It also suggests a possible mechanism for the influence of changes in environmental conditions on wave direction and wavelength. In several cases in which full information does exist, good agreement between the experimental findings and the predictions of the model is found. According to this model it will be worthwhile to invest more effort in measuring the time and space polarization of ciliary beating and times of

  14. A nomogram for predicting survival of nasopharyngeal carcinoma patients with metachronous metastasis.

    PubMed

    Zeng, Zixun; Shen, Lujun; Wang, Yue; Shi, Feng; Chen, Chen; Wu, Ming; Bai, Yutong; Pan, Changchuan; Xia, Yunfei; Wu, Peihong; Li, Wang

    2016-07-01

    Patients with metachronous metastatic nasopharyngeal carcinoma (NPC) differ significantly in survival outcomes. The aim of this study is to build a clinically practical nomogram incorporating known tumor prognostic factors to predict survival for metastatic NPC patients in epidemic areas.A total of 860 patients with metachronous metastatic nasopharyngeal carcinoma were analyzed retrospectively. Variables assessed were age, gender, body mass index, Karnofsky Performance Status (KPS), Union for International Cancer Control (UICC) T and N stages, World Health Organization (WHO) histology type, serum lactate dehydrogenase (sLDH) level, serum Epstein-Barr virus (EBV) level, treatment modality, specific metastatic location (lung/liver/bone), number of metastatic location(s) (isolated vs multiple), and number of metastatic lesion(s) in metastatic location(s) (single vs multiple). The independent prognostic factors for overall survival (OS) by Cox-regression model were utilized to build the nomogram.Independent prognostic factors for OS of metastatic NPC patients included age, UICC N stage, KPS, sLDH, number of metastatic locations, number of metastatic lesions, involvement of liver metastasis, and involvement of bone metastasis. Calibration of the final model suggested a c-index of 0.68 (95% confidence interval [CI], 0.65-0.69). Based on the total point (TP) by nomogram, we further subdivided the study cohort into 4 groups. Group 1 (TP < 320, 208 patients) had the lowest risk of dying. Discrimination was visualized by the differences in survival between these 4 groups (group 2/group 1: hazard ratio [HR] = 1.61, 95%CI: 1.24-2.09; group 3/group 1: HR = 2.20, 95%CI: 1.69-2.86; and group 4/group 1: HR = 3.66, 95%CI: 2.82-4.75).The developed nomogram can help guide the prognostication of patients with metachronous metastatic NPC in epidemic areas. PMID:27399084

  15. Metachronal coupling between spinal neuronal networks during locomotor activity in newborn rat

    PubMed Central

    Falgairolle, Mélanie; Cazalets, Jean-René

    2007-01-01

    In the present study, we investigate spinal cord neuronal network interactions in the neonatal rat during locomotion. The behavioural and physiological relevance of metachronally propagated locomotor activity were inferred from kinematic, anatomical and in vitro electrophysiological data. Kinematic analysis of freely behaving animals indicated that there is a rhythmic sequential change in trunk curvature during the step cycle. The motoneurons innervating back and tail muscles were identified along the spinal cord using retrograde labelling. Systematic multiple recordings from ventral roots were made to determine the precise intrinsic pattern of coordination in the isolated spinal cord. During locomotor-like activity, rhythmic ventral root motor bursts propagate caudo-rostrally in the sacral and the thoracic spinal cord regions. Plotting the latency as a function of the cycle period revealed that the system adapts the intersegmental latency to the ongoing motor period in order to maintain a constant phase relationship along the spinal axis. The thoracic, lumbar and sacral regions were capable of generating right and left alternating motor bursts when isolated. Longitudinal sections of the spinal cord revealed that both the bilateral antiphase pattern observed for the sacral region with respect to the lumbar segment 2 as well as the intersegmental phase lag were due to cross-cord connections. Together, these results provide physiological evidence that the dynamic changes observed in trunk bending during locomotion are determined by the intrinsic organization of spinal cord networks and their longitudinal and transverse interactions. Similarities between this organization, and that of locomotor pattern generation in more primitive vertebrates, suggest that the circuits responsible for metachronal propagation of motor patterns during locomotion are highly conserved. PMID:17185345

  16. Binary primitive alternant codes

    NASA Technical Reports Server (NTRS)

    Helgert, H. J.

    1975-01-01

    In this note we investigate the properties of two classes of binary primitive alternant codes that are generalizations of the primitive BCH codes. For these codes we establish certain equivalence and invariance relations and obtain values of d and d*, the minimum distances of the prime and dual codes.

  17. Metachronous urothelial carcinoma of whole urinary tract in a dialysis-dependent patient: A case report

    PubMed Central

    WANG, YIMIN; JIN, BAIYE; YAO, XIAOLIN

    2016-01-01

    Numerous studies have reported an association between end-stage renal disease (ESRD) and malignancy. The predominant malignant tumor that occurs in patients with ESRD in Asian countries is urothelial carcinoma (UC). According to recent research, cases of UC in dialysis-dependent patients are associated with higher recurrence rates and more aggressive biological behavior compared with patients without ESRD. The necessity of 1-step total urinary tract exenteration for dialysis-dependent patients with UC is advocated by certain studies. The current study reports a case of metachronous bladder cancer and bilateral upper urinary tract tumor in a dialysis-dependent patient. Three separate surgeries were performed to remove the bladder, and left and right urinary tract, respectively. The question of whether the stepwise strategy or the 1-step surgery should be selected for such special cases remains in debate. PMID:27313734

  18. Generalized compliant motion primitive

    NASA Technical Reports Server (NTRS)

    Backes, Paul G. (Inventor)

    1994-01-01

    This invention relates to a general primitive for controlling a telerobot with a set of input parameters. The primitive includes a trajectory generator; a teleoperation sensor; a joint limit generator; a force setpoint generator; a dither function generator, which produces telerobot motion inputs in a common coordinate frame for simultaneous combination in sensor summers. Virtual return spring motion input is provided by a restoration spring subsystem. The novel features of this invention include use of a single general motion primitive at a remote site to permit the shared and supervisory control of the robot manipulator to perform tasks via a remotely transferred input parameter set.

  19. Synchronous and Metachronous Breast Malignancies: A Cross-Sectional Retrospective Study and Review of the Literature

    PubMed Central

    Londero, Ambrogio P.; Bernardi, Sergio; Bertozzi, Serena; Angione, Vito; Gentile, Giuliana; Dri, Cinzia; Minucci, Antonio; Caponnetto, Filippo; Petri, Roberto

    2014-01-01

    Objective. There is increasing interest in patients with metachronous (MBC) and synchronous breast cancer (SBC). The objective of this study was to evaluate the occurrence and outcome of MBCs and SBCs. Methods. A retrospective study on women operated in our department for breast cancer between 2002 and 2005 was carried out. Patients were divided into three groups: women with MBC, SBC, and unilateral breast cancer (UBC). Moreover, we performed a meta-analysis of the English literature about multiple breast cancers between 2000 and 2011 taking into consideration their prevalence and overall survival (OS). Results. We identified 584 breast cancer patients: 16 women (3%) presented SBC and 40 MBC (7%, second cancer after 72-month follow-up IQR 40–145). Although the meta-analysis showed significant OS differences between MBC or SBC and UBC, we did not observe any significant OS difference among the three groups of our population. Anyway, we found a significant worse disease-free survival in MBC than UBC and a significant higher prevalence of radical surgery in MBC and SBC than UBC. Conclusions. Despite the low prevalence of MBC and SBC, the presence of a long time risk of MBC confirms the crucial role of ipsi- and contralateral mammographies in the postoperative follow-up. PMID:24877073

  20. Helicobacter pylori Eradication Reduces the Metachronous Recurrence of Gastric Neoplasms by Attenuating the Precancerous Process

    PubMed Central

    Jung, Da Hyun; Lee, Yong Chan; Lee, Sang Kil; Shin, Sung Kwan; Park, Jun Chul; Chung, Hyun Soo; Kim, Hyunki; Kim, Hoguen; Kim, Yong Hoon; Park, Jae Jun; Youn, Young Hoon; Park, Hyojin

    2015-01-01

    Purpose The importance of Helicobacter pylori eradication after endoscopic resection (ER) of gastric neoplasms remains controversial. In this study, we clarified the importance of H. pylori eradication for metachronous lesions after ER. Materials and Methods This study included 3,882 patients with gastric neoplasms who underwent ER. We included patients infected with H. pylori who received eradication therapy. Among them, 34 patients with metachronous lesions after ER and 102 age- and sex-matched patients (nonmetachronous group) were enrolled. Background mucosal pathologies such as atrophy and intestinal metaplasia (IM) were evaluated endoscopically. The expression levels of CDX1, CDX2, Sonic hedgehog (SHH), and SOX2 were evaluated based on H. pylori eradication and the development of metachronous lesions. Results The eradication failure rate was higher in the metachronous group than in the nonmetachronous group (P=0.036). Open-type atrophy (P=0.003) and moderate-to-severe IM (P=0.001) occurred more frequently in the metachronous group. In patients with an initial diagnosis of dysplasia, the eradication failure rate was higher in the metachronous group than in the nonmetachronous group (P=0.002). In addition, open-type atrophy was more frequent in the metachronous group (P=0.047). In patients with an initial diagnosis of carcinoma, moderate-to-severe IM occurred more frequently in the metachronous group (P=0.003); however, the eradication failure rate was not significantly different between the two groups. SHH and SOX2 expression was increased, and CDX2 expression was decreased in the nonmetachronous group after eradication (P<0.05). Conclusions Open-type atrophy, moderate-to-severe IM, and H. pylori eradication failure were significantly associated with metachronous lesions. However, eradication failure was significantly associated with dysplasia, but not carcinoma, in the metachronous group. Thus, H. pylori eradication may play an important role in preventing

  1. Workshop: Teaching Primitive Arts.

    ERIC Educational Resources Information Center

    Jordison, Jerry

    1999-01-01

    Discusses the concrete and spiritual aspects of teaching workshops on survival skills or primitive arts. Gives details on lostproofing, or ways to teach a child not to get lost in the outdoors; building a survival shelter; and wilderness cooking. (CDS)

  2. Peripheral primitive neuroectodermal tumor of the kidney in a 51-year-old female following breast cancer: A case report and review of the literature.

    PubMed

    Zhong, Jinjing; Chen, Ni; Chen, Xueqin; Gong, Jing; Nie, Ling; Xu, Miao; Zhou, Qiao

    2015-01-01

    Peripheral primitive neuroectodermal tumor/Ewing's sarcoma (pPNET/EWS) is an aggressive type of sarcoma that is rarely observed in the kidney. pPNET of the kidney principally occurs in young patients (<50 years old) and is very rare in older patients (≥50 years old). Additionally, only six cases of pPNET of the kidney have been reported in the literature in older patients (≥50 years old), and pPNET as a secondary primary tumor has rarely been reported. The current study presents a case of renal pPNET in a 51-year-old female who had been surgically treated for breast carcinoma and administered with adjuvant chemotherapy five years prior to hospitalization for pPNET. A computed tomography scan identified a tumor in the lower pole of the right kidney, which was treated by nephrectomy. Immunohistochemistry demonstrated diffuse, strong membranous positivity for cluster of differentiation (CD)99, positive nuclear staining for friend leukemia integration 1, and negative staining for Wilms' tumor 1 and other markers. Fluorescence in situ hybridization (FISH) analysis of the EWS breakpoint region 1 (EWSR1) demonstrated the characteristic EWSR1 translocation. The patient declined chemotherapy or radiotherapy but accepted traditional Chinese medicine. No evidence of recurrence was observed eight months after diagnosis. Only two cases of renal pPNET with a history of an earlier or synchronous primary cancer were reported in the literature from the USA and Germany, respectively. To the best of our knowledge, the present case is the first FISH-confirmed renal pPNET in an older patient following breast adenocarcinoma. PMID:25435942

  3. INSM1 promoter-driven adenoviral herpes simplex virus thymidine kinase cancer gene therapy for the treatment of primitive neuroectodermal tumors.

    PubMed

    Wang, Hong-Wei; Breslin, Mary B; Chen, Chiachen; Akerstrom, Victoria; Zhong, Qiu; Lan, Michael S

    2009-11-01

    The INSM1 gene encodes a developmentally regulated zinc finger transcription factor. INSM1 expression is normally absent in adult tissues, but is reactivated in neuroendocrine tumor cells. In the present study, we analyzed the therapeutic potential of an adenoviral INSM1 promoter-driven herpes simplex virus thymidine kinase (HSV-tk) construct in primitive neuroectodermal tumors (PNETs). We constructed an adenoviral INSM1 promoter-driven HSV-tk gene for therapy in PNETs. The PNET-specific adeno-INSM1 promoter HSV-tk construct was tested both in vitro and in vivo in a nude mouse tumor model. Northern blot analysis and transient transfection of an INSM1 promoter-driven luciferase reporter gene indicated that the INSM1 promoter was active in neuroblastoma (IMR-32), retinoblastoma (Y79), and medulloblastoma (D283 Med) cells, but not in glioblastoma (U-87 MG) cells. After Ad-INSM1p-HSV-tk infection, the levels of HSV-tk protein expression were consistent with INSM1 promoter activities. Furthermore, in vitro multiplicity of infection and ganciclovir (GCV) sensitivity studies indicated that the INSM1 promoter could mediate specific expression of the HSV-tk gene and selective killing of INSM1-positive PNETs. In vivo intratumoral adenoviral delivery demonstrated that the INSM1 promoter could direct HSV-tk gene expression in a nude mouse tumor model and effectively repressed tumor growth in response to GCV treatment. Taken together, our data show that the INSM1 promoter is specific and effective for targeted cancer gene therapy in PNETs. PMID:19604042

  4. Cytogenomics and gene expression in a case of metachronous bilateral renal cell carcinomas with drop metastasis: Resolving a diagnostic dilemma with molecular technologies.

    PubMed

    Takei, Hidehiro; Barrios, Roberto; Monzon, Federico A

    2013-06-01

    Metachronous bilateral renal cell carcinomas (RCCs) are rare but well known. We present a case of metachronous bilateral RCCs with a ureter orifice metastasis, for which the pathological diagnosis was confirmed with single nucleotide polymorphism microarray (SNP-M) and gene expression assay (GEA). A 53-year-old man presented with a right ureteral obstruction. A cystoscopy showed a large pedunculated tumor emanating from the right ureteral orifice, consistent with a drop metastasis, which was biopsied. He had a history of a clear cell RCC (ccRCC) 1.5 years prior and a right renal pelvic mass found 8 months later. Histologically, the biopsied right ureteral tumor demonstrated sheets of poorly differentiated cancer cells composed of a mixture of spindled and focal clear cell components. The main differential diagnosis was metastatic RCC versus urothelial carcinoma, but the immunohistochemical profile was not contributory. SNP-M revealed a genomic profile consistent with a metastatic ccRCC with loss of chromosome 3p. GEA showed a gene expression pattern consistent with kidney origin. The cytogenomic array also identified chromosome copy number patterns that were shared between both kidney tumors. This finding suggests that both tumors had a common origin, and thus, the metachronous ccRCC in the contralateral kidney represents a metastasis. PMID:23782335

  5. [Jaws of primitive mammals].

    PubMed

    Tsubamoto, Takehisa

    2005-06-01

    Some of main osteological differences between mammals and reptiles are seen in the number of bones that constitute lower jaw and in jaw articulation. A lower jaw of mammals consists of only one bone, while in reptiles it consists of several bones (e.g., four to six in lizards and five in crocodiles). The jaw articulation in mammals is performed by squamosal of the skull and the mandible ( = dentary), while in reptiles it is done by quadrate of the skull and articular of the lower jaw. When mammals first appeared about 200 million years ago in the Mesozoic Era, the jaws of primitive mammals were morphologically intermediate between those of reptiles and typical mammals. Here, I briefly introduce the evolution of lower jaw morphology from the reptilian one to the mammalian one, showing lower jaw features of some mammal-like reptiles and primitive mammals. PMID:15930721

  6. Metachronal wave of artificial cilia array actuated by applied magnetic field

    NASA Astrophysics Data System (ADS)

    Tsumori, Fujio; Marume, Ryuma; Saijou, Akinori; Kudo, Kentaro; Osada, Toshiko; Miura, Hideshi

    2016-06-01

    In this paper, a biomimetic microstructure related to cilia, which are effective fluidic and conveying systems in nature, is described. Authors have already reported that a magnetic elastomer pillar actuated by a rotating magnetic field can work like a natural cilium. In the present work, we show examples of a cilia array with a metachronal wave as the next step. A metachronal wave is a sequential action of a number of cilia. It is theoretically known that a metachronal wave gives a higher fluidic efficiency; however, there has been no report on a metachronal wave by artificial cilia. We prepared magnetic elastomer pillars that contain chainlike clusters of magnetic particles. The orientation of chains was set to be different in each pillar so that each pillar will deform with a different phase.

  7. Counting Primitive Pythagorean Triples

    ERIC Educational Resources Information Center

    Ayoub, Ayoub B.

    2005-01-01

    A triple (x,y,z) of natural numbers is called a Primitive Pythagorean Triple (PPT) if it satisfies two conditions: (1) x[squared] + y[squared] = z[squared]; and (2) x, y, and z have no common factor other than one. All the PPT's are given by the parametric equations: (1) x = m[squared] - n[squared]; (2) y = 2mn; and (3) z = m[squared] +…

  8. Ciliary metachronal wave propagation on the compliant surface of Paramecium cells.

    PubMed

    Narematsu, Naoki; Quek, Raymond; Chiam, Keng-Hwee; Iwadate, Yoshiaki

    2015-12-01

    Ciliary movements in protozoa exhibit metachronal wave-like coordination, in which a constant phase difference is maintained between adjacent cilia. It is at present generally thought that metachronal waves require hydrodynamic coupling between adjacent cilia and the extracellular fluid. To test this hypothesis, we aspirated a Paramecium cell using a micropipette which completely sealed the surface of the cell such that no fluid could pass through the micropipette. Thus, the anterior and the posterior regions of the cell were hydrodynamically decoupled. Nevertheless, we still observed that metachronal waves continued to propagate from the anterior to the posterior ends of the cell, suggesting that in addition to hydrodynamic coupling, there are other mechanisms that can also transmit the metachronal waves. Such transmission was also observed in computational modeling where the fluid was fully decoupled between two partitions of a beating ciliary array. We also imposed cyclic stretching on the surface of live Paramecium cells and found that metachronal waves persisted in the presence of cyclic stretching. This demonstrated that, in addition to hydrodynamic coupling, a compliant substrate can also play a critical role in mediating the propagation of metachronal waves. PMID:26616106

  9. Primitive society, health & elderly.

    PubMed

    Dhar, H L

    2000-03-01

    Mankind have been ravaged by diseases since primitive age and remedial measures were emprirical learnt either by accident, experience or superstition. But most elderly population were killed and hardly died of diseases. Fate of women were no better. Care for elderly came with civilization. They were little better in the East compared to the West. Although elderly population were better treated in India, China tops the list for elderly care. Even today the oldest man in the family is most respected. Civilized nations even today discriminate elderly population compared to children and adult, but apply the yardstick in a different manner, direct killing alone is not allowed. PMID:11227620

  10. Carbon in primitive meteorites

    NASA Technical Reports Server (NTRS)

    Kerridge, John F.

    1990-01-01

    No meteorites are truly primitive, in the sense of being pristine collections of interstellar grains or solar-nebular condensates. Nonetheless, some chrondritic meteorites have been so little altered by secondary processing that they are commonly termed primitive and it is almost a definition of such chondrites that they contain significant quantities of carbon. Most of that carbon is of apparently local, i.e., solar-system, origin but a proportion that ranges from trace, in some cases, to minor, in others, is believed to be exotic, i.e., of circumstellar or interstellar origin, and it is upon such material that researchers focus here. The nature of the meteoritic samples and the techniques used to analyse them are briefly discussed and the observational record is surveyed. Clearly, the study of exotic carbon preserved in meteorites has been informative about sites of nucleosynthesis, processes of nucleation and growth of grains in stellar outflows, grain survival in the interstellar medium, and many other topics of astrophysical significance. Much more work, particularly of an interdisciplinary nature remains to be done, however.

  11. A Structure behind Primitive Chaos

    NASA Astrophysics Data System (ADS)

    Ogasawara, Yoshihito

    2015-06-01

    Recently, a new concept, primitive chaos, has been proposed as a concept closely related to the fundamental problems of physics itself such as determinism, causality, free will, predictability, and irreversibility [J. Phys. Soc. Jpn. 79, 015002 (2010)]. This paper reveals a structure hidden behind the primitive chaos; under some conditions, a new primitive chaos is constructed from the original primitive chaos, this procedure can be repeated, and the hierarchical structure of the primitive chaos is obtained. This implies such a picture that new events and causality are constructed from the old ones, with the aid of the concept of a coarse graining. As an application of this structure, interesting facts are revealed for the essential condition of the primitive chaos and for chaotic behaviors.

  12. Metachronal waves in the flagellar beating of Volvox and their hydrodynamic origin

    PubMed Central

    Brumley, Douglas R.; Polin, Marco; Pedley, Timothy J.; Goldstein, Raymond E.

    2015-01-01

    Groups of eukaryotic cilia and flagella are capable of coordinating their beating over large scales, routinely exhibiting collective dynamics in the form of metachronal waves. The origin of this behaviour—possibly influenced by both mechanical interactions and direct biological regulation—is poorly understood, in large part due to a lack of quantitative experimental studies. Here we characterize in detail flagellar coordination on the surface of the multicellular alga Volvox carteri, an emerging model organism for flagellar dynamics. Our studies reveal for the first time that the average metachronal coordination observed is punctuated by periodic phase defects during which synchrony is partial and limited to specific groups of cells. A minimal model of hydrodynamically coupled oscillators can reproduce semi-quantitatively the characteristics of the average metachronal dynamics, and the emergence of defects. We systematically study the model's behaviour by assessing the effect of changing intrinsic rotor characteristics, including oscillator stiffness and the nature of their internal driving force, as well as their geometric properties and spatial arrangement. Our results suggest that metachronal coordination follows from deformations in the oscillators' limit cycles induced by hydrodynamic stresses, and that defects result from sufficiently steep local biases in the oscillators' intrinsic frequencies. Additionally, we find that random variations in the intrinsic rotor frequencies increase the robustness of the average properties of the emergent metachronal waves. PMID:26040592

  13. Metachronal waves in the flagellar beating of Volvox and their hydrodynamic origin.

    PubMed

    Brumley, Douglas R; Polin, Marco; Pedley, Timothy J; Goldstein, Raymond E

    2015-07-01

    Groups of eukaryotic cilia and flagella are capable of coordinating their beating over large scales, routinely exhibiting collective dynamics in the form of metachronal waves. The origin of this behavior--possibly influenced by both mechanical interactions and direct biological regulation--is poorly understood, in large part due to a lack of quantitative experimental studies. Here we characterize in detail flagellar coordination on the surface of the multicellular alga Volvox carteri, an emerging model organism for flagellar dynamics. Our studies reveal for the first time that the average metachronal coordination observed is punctuated by periodic phase defects during which synchrony is partial and limited to specific groups of cells. A minimal model of hydrodynamically coupled oscillators can reproduce semi-quantitatively the characteristics of the average metachronal dynamics, and the emergence of defects. We systematically study the model's behaviour by assessing the effect of changing intrinsic rotor characteristics, including oscillator stiffness and the nature of their internal driving force, as well as their geometric properties and spatial arrangement. Our results suggest that metachronal coordination follows from deformations in the oscillators' limit cycles induced by hydrodynamic stresses, and that defects result from sufficiently steep local biases in the oscillators' intrinsic frequencies. Additionally, we find that random variations in the intrinsic rotor frequencies increase the robustness of the average properties of the emergent metachronal waves. PMID:26040592

  14. Dynamic Primitives of Motor Behavior

    PubMed Central

    Hogan, Neville; Sternad, Dagmar

    2013-01-01

    We present in outline a theory of sensorimotor control based on dynamic primitives, which we define as attractors. To account for the broad class of human interactive behaviors—especially tool use—we propose three distinct primitives: submovements, oscillations and mechanical impedances, the latter necessary for interaction with objects. Due to fundamental features of the neuromuscular system, most notably its slow response, we argue that encoding in terms of parameterized primitives may be an essential simplification required for learning, performance, and retention of complex skills. Primitives may simultaneously and sequentially be combined to produce observable forces and motions. This may be achieved by defining a virtual trajectory composed of submovements and/or oscillations interacting with impedances. Identifying primitives requires care: in principle, overlapping submovements would be sufficient to compose all observed movements but biological evidence shows that oscillations are a distinct primitive. Conversely, we suggest that kinematic synergies, frequently discussed as primitives of complex actions, may be an emergent consequence of neuromuscular impedance. To illustrate how these dynamic primitives may account for complex actions, we briefly review three types of interactive behaviors: constrained motion, impact tasks, and manipulation of dynamic objects. PMID:23124919

  15. Hysteresis in the metachronal-tripod gait transition of insects: A modeling study

    NASA Astrophysics Data System (ADS)

    Fujiki, Soichiro; Aoi, Shinya; Funato, Tetsuro; Tomita, Nozomi; Senda, Kei; Tsuchiya, Kazuo

    2013-07-01

    Locomotion in biological systems involves various gaits, and hysteresis appears when the gaits change in accordance with the locomotion speed. That is, the gaits vary at different locomotion speeds depending on the direction of speed change. Although hysteresis is a typical characteristic of nonlinear dynamic systems, the underlying mechanism for the hysteresis in gait transitions remains largely unclear. In this study, we construct a neuromechanical model of an insect and investigate the dynamic characteristics of its gait and gait transition. The simulation results show that our insect model produces metachronal and tripod gaits depending on the locomotion speed through dynamic interactions among the body mechanical system, the nervous system, and the environment in a self-organized manner. They also show that it undergoes the metachronal-tripod gait transition with hysteresis by changing the locomotion speed. We examined the hysteresis mechanism in the metachronal-tripod gait transition of insects from a dynamic viewpoint.

  16. Hydrodynamic synchronization and metachronal waves on the surface of the colonial alga Volvox carteri.

    PubMed

    Brumley, Douglas R; Polin, Marco; Pedley, Timothy J; Goldstein, Raymond E

    2012-12-28

    From unicellular ciliates to the respiratory epithelium, carpets of cilia display metachronal waves, long-wavelength phase modulations of the beating cycles, which theory suggests may arise from hydrodynamic coupling. Experiments have been limited by a lack of organisms suitable for systematic study of flagella and the flows they create. Using time-resolved particle image velocimetry, we report the discovery of metachronal waves on the surface of the colonial alga Volvox carteri, whose large size and ease of visualization make it an ideal model organism for these studies. An elastohydrodynamic model of weakly coupled compliant oscillators, recast as interacting phase oscillators, reveals that orbit compliance can produce fast, robust synchronization in a manner essentially independent of boundary conditions, and offers an intuitive understanding of a possible mechanism leading to the emergence of metachronal waves. PMID:23368623

  17. Hydrodynamic Synchronization and Metachronal Waves on the Surface of the Colonial Alga Volvox carteri

    NASA Astrophysics Data System (ADS)

    Brumley, Douglas R.; Polin, Marco; Pedley, Timothy J.; Goldstein, Raymond E.

    2012-12-01

    From unicellular ciliates to the respiratory epithelium, carpets of cilia display metachronal waves, long-wavelength phase modulations of the beating cycles, which theory suggests may arise from hydrodynamic coupling. Experiments have been limited by a lack of organisms suitable for systematic study of flagella and the flows they create. Using time-resolved particle image velocimetry, we report the discovery of metachronal waves on the surface of the colonial alga Volvox carteri, whose large size and ease of visualization make it an ideal model organism for these studies. An elastohydrodynamic model of weakly coupled compliant oscillators, recast as interacting phase oscillators, reveals that orbit compliance can produce fast, robust synchronization in a manner essentially independent of boundary conditions, and offers an intuitive understanding of a possible mechanism leading to the emergence of metachronal waves.

  18. Scans as primitive parallel operations

    SciTech Connect

    Blelloch, G.E. . Dept. of Computer Science)

    1989-11-01

    In most parallel random access machine (PRAM) models, memory references are assumed to take unit time. In practice, and in theory, certain scan operations, also known as prefix computations, can execute in no more time than these parallel memory references. This paper outlines an extensive study of the effect of including, in the PRAM models, such scan operations as unit-time primitives. The study concludes that the primitives improve the asymptotic running time of many algorithms by an O(log n) factor greatly simplify the description of many algorithms, and are significantly easier to implement than memory references. The authors argue that the algorithm designer should feel free to use these operations as if they were as cheap as a memory reference. This paper describes five algorithms that clearly illustrate how the scan primitives can be used in algorithm design. These all run on an EREW PRAM with the addition of two scan primitives.

  19. Ten new primitive binary trinomials

    NASA Astrophysics Data System (ADS)

    Brent, Richard P.; Zimmermann, Paul

    2009-06-01

    We exhibit ten new primitive trinomials over GF(2) of record degrees 24 036 583 , 25 964 951 , 30 402 457 , and 32 582 657 . This completes the search for the currently known Mersenne prime exponents.

  20. Metachronous Bilateral Posterior Tibial Artery Aneurysms in Ehlers-Danlos Syndrome Type IV

    SciTech Connect

    Hagspiel, Klaus D.; Bonatti, Hugo; Sabri, Saher; Arslan, Bulent; Harthun, Nancy L.

    2011-04-15

    Ehlers-Danlos syndrome type IV is a life-threatening genetic connective tissue disorder. We report a 24-year-old woman with EDS-IV who presented with metachronous bilateral aneurysms/pseudoaneurysms of the posterior tibial arteries 15 months apart. Both were treated successfully with transarterial coil embolization from a distal posterior tibial approach.

  1. RECONSTITUTION OF METACHRONAL WAVES IN CILIATED CORTICAL SHEETS OF PARAMECIUM - ASYMMETRY OF THE CILIARY MOVEMENTS

    PubMed

    Okamoto; Nakaoka

    1994-07-01

    In conditions in which ciliated cortical sheets prepared from detergent-extracted Paramecium multimicronucleatum cells adhered to glass coverslips on a microscope stage, perfusion of a reactivation medium containing ATP plus cyclic AMP or cyclic GMP generated metachronal waves. An analysis of the ciliary movements that generate these metachronal waves yielded the following results. During the generation of metachronal waves, there were phase differences in the ciliary orientation of adjacent cilia in the direction of wave propagation. Addition of cyclic AMP or cyclic GMP increased the rotational angular velocities during the effective stroke of ciliary beating, but did not increase the rotational angular velocity of the recovery stroke. When the ATP concentration in the cyclic GMP reactivation medium was increased, the rotational angular velocity during the effective stroke rose steeply and saturated at 0.8 mmol l-1 ATP, whereas that during the recovery stroke rose gradually. Addition of cyclic nucleotides caused a single cilium isolated from neighbouring cilia on the cortical sheet to incline almost parallel to the cortical surface during the recovery stroke. Addition of cyclic GMP increased the amplitude of bending of cilia detached from the cortical sheet. From these results, it was concluded that increases in the asymmetrical movement of individual cilia, caused by the addition of cyclic nucleotides, create the ciliary interaction that generates the metachronal waves. PMID:9317363

  2. Guidelines of the French Society of Otorhinolaryngology (SFORL), short version. Diagnosis of local recurrence and metachronous locations in head and neck oncology.

    PubMed

    Halimi, C; Barry, B; De Raucourt, D; Choussy, O; Dessard-Diana, B; Hans, S; Lafarge, D

    2015-11-01

    Surveillance is fundamental to the management of head and neck cancer. The present guidelines of the French ENT society (SFORL) were drawn up by a group of experts in the field, and are intended to specify the modalities of management, based on a review of the literature and, where data are lacking, to provide expert opinion. The present paper deals with guidelines for the diagnosis of local and regional recurrence and metachronous head and neck locations. Locoregional recurrence usually occurs within 3 years of primary treatment and is mainly related to the characteristics of the primary tumor and the treatment measures taken. Laryngeal location, safe primary resection margins, low level of lymph node invasion, unimodal primary treatment and early diagnosis of recurrence are factors of good prognosis. Systematic imaging surveillance may be considered for patients for whom a curative technique exists and when surveillance is difficult. The role of PET-scanning remains to be determined. Metachronous locations are frequent, even in the late course; prolonged surveillance is appropriate. The best preventive measure is cessation of alcohol abuse and smoking. Patient education is primordial. PMID:26297073

  3. RIPE integrity primitives, part 1 (RACE Integrity Primitives Evaluation)

    NASA Astrophysics Data System (ADS)

    Denboer, B.; Boly, J. P.; Bosselaers, A.; Brandt, J.; Chaum, D.; Damgaard, I.; Dichtl, M.; Fumy, W.; Vanderham, M.; Jansen, C. J. A.

    1993-04-01

    A manual intended for those seeking to secure information systems by applying modern cryptography is presented. It represents the successful attainment of goals by RIPE (RACE (Research and development of Advanced Communication technology in Europe) Integrity Primitives Evaluation). The recommended portfolio of integrity primitives, which is the main product of the project, forms the heart of the manual. By integrity, is meant the kinds of security that can be achieved through cryptography, apart from keeping messages secret. Thus included are ways to ensure that stored or communicated data is not illicitly modified, that parties exchanging messages are actually present, and that 'signed' electronic messages can be recognized as authentic by anyone. Of particular concern to the project were the high speed requirements of broadband communication. The project also aimed for completeness in its recommendations. As a result, the portfolio contains primitives, that is building blocks, that can meet most of today's perceived needs for integrity.

  4. RIPE integrity primitives, part 2 (RACE Integrity Primitives Evaluation)

    NASA Astrophysics Data System (ADS)

    Denboer, B.; Boly, J. P.; Bosselaers, A.; Brandt, J.; Chaum, D.; Damgaard, I.; Dichtl, M.; Fumy, W.; Vanderham, M.; Jansen, C. J. A.

    1993-04-01

    A manual intended for those seeking to secure information systems by applying modern cryptography is presented. It represents the successful attainment of goals by RIPE (RACE (Research and development of Advanced Communications technology in Europe) Integrity Primitives Evaluation). The recommended portfolio of integrity primitives, which is the main product of the project, forms the heart of the manual. By integrity, is meant the kinds of security that can be achieved through cryptography, apart from keeping messages secret. Thus included are ways to ensure that stored or communicated data is not illicitly modified, that parties exchanging messages are actually present, and that 'signed' electronic messages can be recognized as authentic by anyone. Of particular concern to the project were the high speed requirements of broadband communication. The project also aimed for completeness in its recommendations. As a result, the portfolio contains primitives, that is building blocks, that can meet most of today's perceived needs for integrity.

  5. Risk factors for astrocytic glioma and primitive neuroectodermal tumor of the brain in young children: a report from the Children's Cancer Group.

    PubMed

    Bunin, G R; Buckley, J D; Boesel, C P; Rorke, L B; Meadows, A T

    1994-01-01

    We conducted a matched case-control study to investigate risk factors for the two most common types of brain tumors in children, astrocytic glioma and primitive neuroectodermal tumor (PNET). Since the study focused on gestational exposures, we restricted it to young children because these exposures would be expected to act early in life. Parents of 155 astrocytic glioma cases, 166 PNET cases, and controls identified by random digit dialing completed telephone interviews. Few associations occurred with the hypothesized risk factors, which were gestational exposure to alcohol, hair coloring products, farms, and substances containing N-nitroso compounds (passive smoking, makeup, incense, new cars, pacifiers, baby bottles, beer). Of the products studied that contain N-nitroso compounds, only beer was associated with a significantly increased risk of either tumor type [odds ratio (OR) for PNET = 4.0; 95% confidence interval (CI), 1.1-22.1; P = 0.04]. Elevated ORs for PNET were observed for farm residence of the mother during the pregnancy (OR = 3.7; 95% CI, 0.8-23.9; P = 0.06) and of the child for at least a year (OR = 5.0; 95% CI, 1.1-46.8; P = 0.04). Significant associations with astrocytoma were observed for mother's use of kerosene (OR = 8.9; 95% CI, 1.1-71.1; P = 0.04) and birth by Caesarean section (OR = 1.8; 95% CI, 1.1-3.2; P = 0.03). History of miscarriage was associated with a lower risk of PNET (OR = 0.5; 95% CI, 0.3-0.9; P = 0.02).(ABSTRACT TRUNCATED AT 250 WORDS) PMID:8019366

  6. Super VGA Primitives Graphics System.

    Energy Science and Technology Software Center (ESTSC)

    1992-05-14

    Version 00 These primitives are the lowest level routines needed to perform super VGA graphics on a PC. A sample main program is included that exercises the primitives. Both Lahey and Microsoft FORTRAN's have graphics libraries. However, the libraries do not support 256 color graphics at resolutions greater than 320x200. The primitives bypass these libraries while still conforming to standard usage of BIOS. The supported graphics modes depend upon the PC graphics card and itsmore » memory. Super VGA resolutions of 640x480 and 800x600 have been tested on an ATI VGA Wonder card with 512K memory and on several 80486 PC's (unknown manufacturers) at retail stores.« less

  7. AGUA TIBIA PRIMITIVE AREA, CALIFORNIA.

    USGS Publications Warehouse

    Irwin, William P.; Thurber, Horace K.

    1984-01-01

    The Agua Tibia Primitive Area in southwestern California is underlain by igneous and metamorphic rocks that are siilar to those widely exposed throughout much of the Peninsular Ranges. To detect the presence of any concealed mineral deposits, samples of stream sediments were collected along the various creeks that head in the mountain. As an additional aid in evaluating the mineral potential, an aeromagnetic survey was made and interpreted. A search for records of past or existing mining claims within the primitive area was made but none was found. Evidence of deposits of metallic or nonmetallic minerals was not seen during the study.

  8. Characterisation of metachronal waves on the surface of the spherical colonial alga Volvox carteri

    NASA Astrophysics Data System (ADS)

    Brumley, Douglas; Polin, Marco; Morez, Constant; Goldstein, Raymond; Pedley, Timothy

    2012-02-01

    Volvox carteri is a spherical colonial alga, consisting of thousands of biflagellate cells. The somatic cells embedded on the surface of the colony beat their flagella in a coordinated fashion, producing a net fluid motion. Using high-speed imaging and particle image velocimetry (PIV) we have been able to accurately analyse the time-dependent flow fields around such colonies. The somatic cells on the colony surface may beat their flagella in a perfectly synchronised fashion, or may exhibit metachronal waves travelling on the surface. We analyse the dependence of this synchronisation on fundamental parameters in the system such as colony radius, characterise the speed and wavelength of the observed metachronal waves, and investigate possible models to account for the exhibited behaviour.

  9. Energetic considerations of ciliary beating and the advantage of metachronal coordination

    PubMed Central

    Gueron, Shay; Levit-Gurevich, Konstantin

    1999-01-01

    The internal mechanism of cilia is among the most ancient biological motors on an evolutionary scale. It produces beat patterns that consist of two phases: during the effective stroke, the cilium moves approximately as a straight rod, and during the recovery stroke, it rolls close to the surface in a tangential motion. It is commonly agreed that these two phases are designed for efficient functioning: the effective stroke encounters strong viscous resistance and generates thrust, whereas the recovery stroke returns the cilium to starting position while avoiding viscous resistance. Metachronal coordination between cilia, which occurs when many of them beat close to each other, is believed to be an autonomous result of the hydrodynamical interactions in the system. Qualitatively, metachronism is perceived as a way for reducing the energy expenditure required for beating. This paper presents a quantitative study of the energy expenditure of beating cilia, and of the energetic significance of metachronism. We develop a method for computing the work done by model cilia that beat in a viscous fluid. We demonstrate that for a single cilium, beating in water, the mechanical work done during the effective stroke is approximately five times the amount of work done during the recovery stroke. Investigation of multicilia configurations shows that having neighboring cilia beat metachronally is energetically advantageous and perhaps even crucial for multiciliary functioning. Finally, the model is used to approximate the number of dynein arm attachments that are likely to occur during the effective and recovery strokes of a beat cycle, predicting that almost all of the available dynein arms should participate in generating the motion. PMID:10535905

  10. Primary renal primitive neuroectodermal tumor

    PubMed Central

    Goel, V; Talwar, V; Dodagoudar, C; Singh, S; Sharma, A; Patnaik, N

    2015-01-01

    Primitive Neuroectodermal Tumor of the kidney is a rare entity. Very few cases of primary renal PNET have been reported to date. Most literature about rPNET is isolated case reports. We report a case of rPNET in a 39-year-old male with a pre-operative diagnosis of renal cell carcinoma with renal vein thrombosis. The patient underwent radical nephrectomy with thrombolectomy, and histopathological examination revealed a highly aggressive tumor composed of monotonous sheets of round cells. Tumor cells were positive for CD 99 and FLI-1, hence confirming the diagnosis of Primitive Neuroectodermal Tumor. Post-surgery, patient was given VAC/IE-based adjuvant chemotherapy. In view of highly aggressive nature of this tumor, prompt diagnosis and imparting effective chemotherapy regimen to the patient is required, and it is important to differentiate PNET from other small round-cell tumors because of different therapeutic approach. PMID:25766349

  11. MOUNT JEFFERSON PRIMITIVE AREA, OREGON.

    USGS Publications Warehouse

    Walker, George W.; Pattee, Eldon C.

    1984-01-01

    Mineral and reconnaissance geothermal surveys of the Mount Jefferson Primitive Area in the Cascade Range of Oregon indicate little likelihood that metallic or nonmetallic mineral or energy resources exist in the area. Several mining claims, presumably located for gold, are present, but analyses of samples from the claims failed to detect the presence of gold or other valuable metals. Rock for construction purposes is abundantly present, but better and more accessible deposits are available in adjacent areas.

  12. SPANISH PEAKS PRIMITIVE AREA, MONTANA.

    USGS Publications Warehouse

    Calkins, James A.; Pattee, Eldon C.

    1984-01-01

    A mineral survey of the Spanish Peaks Primitive Area, Montana, disclosed a small low-grade deposit of demonstrated chromite and asbestos resources. The chances for discovery of additional chrome resources are uncertain and the area has little promise for the occurrence of other mineral or energy resources. A reevaluation, sampling at depth, and testing for possible extensions of the Table Mountain asbestos and chromium deposit should be undertaken in the light of recent interpretations regarding its geologic setting.

  13. SAN RAFAEL PRIMITIVE AREA, CALIFORNIA.

    USGS Publications Warehouse

    Gower, H.D.

    1984-01-01

    No mineral-resource potential was identified during studies of the San Rafael Primitive Area, located at the southern end of the Coast Ranges of California. No petroleum has been produced from the area and there is little promise for the occurrence of energy resources. Limestone occurs in the area but also is found in abundance outside the area. Inasmuch as sampling and analytical techniques have improved significantly since this study was completed a restudy of the area using new methodology is possibly warranted.

  14. Primitive control of cellular metabolism

    NASA Technical Reports Server (NTRS)

    Mitz, M. A.

    1974-01-01

    It is pointed out that control substances must have existed from the earliest times in the evolution of life and that the same control mechanisms must exist today. The investigation reported is concerned with the concept that carbon dioxide is a primitive regulator of cell function. The effects of carbon dioxide on cellular materials are examined, taking into account questions of solubilization, dissociation, changes of charge, stabilization, structural changes, wettability, the exclusion of other gases, the activation of compounds, changes in plasticity, and changes in membrane permeability.

  15. Developmental genetics in primitive chordates.

    PubMed Central

    Sordino, P; Belluzzi, L; De Santis, R; Smith, W C

    2001-01-01

    Recent advances in the study of the genetics and genomics of urochordates testify to a renewed interest in this chordate subphylum, believed to be the most primitive extant chordate relatives of the vertebrates. In addition to their primitive nature, many features of their reproduction and early development make the urochordates ideal model chordates for developmental genetics. Many urochordates spawn large numbers of transparent and externally developing embryos on a daily basis. Additionally, the embryos have a defined and well-characterized cell lineage until the end of gastrulation. Furthermore, the genomes of the urochordates have been estimated to be only 5-10% of the size of the vertebrates and to have fewer genes and less genetic redundancy than vertebrates. Genetic screens, which are powerful tools for investigating developmental mechanisms, have recently become feasible due to new culturing techniques in ascidians. Because hermaphrodite ascidians are able to self-fertilize, recessive mutations can be detected in a single generation. Several recent studies have demonstrated the feasibility of applying modern genetic techniques to the study of ascidian biology. PMID:11604124

  16. Compositional studies of primitive asteroids

    NASA Technical Reports Server (NTRS)

    Vilas, F.

    1988-01-01

    The composition of primitive asteroids and their relationship to satellites in the solar system will be studied by analyzing existing narrowband charge coupled device (CCD) reflectance spectra, acquiring additional spectra of asteroids and small satellites in the 0.5 to 1.0 micrometer spectral range, and exploring possibilities for obtaining compositional information in the blue-UV spectral region. Comparison with laboratory spectra of terrestrial chlorites and serpentines (phyllosilicates) and the clay minerals found in carbonaceous chondrite meteorites will continue. During 1987, narrowband CCD reflectance spectra of 17 additional asteroids were acquired. These spectra and spectra of 34 other asteroids have been used primarily for two studies: weak absorption features similar to those due to Fe2(+) and Fe2(+) - Fe3(+) transitions in iron oxides f ound in terrestrial chlorites and serpentines and carbonaceous chondrites have been identified in some primitive asteroid spectra. There is a first indication that asteroids grouped by heliocentric distance show similar weak absorption features. Nonparametric statistics are being applied to test the hypothesis of discrete remnants of a gradation in composition of outer-belt asteroids.

  17. Stardust silicates from primitive meteorites.

    PubMed

    Nagashima, Kazuhide; Krot, Alexander N; Yurimoto, Hisayoshi

    2004-04-29

    Primitive chondritic meteorites contain material (presolar grains), at the level of a few parts per million, that predates the formation of our Solar System. Astronomical observations and the chemical composition of the Sun both suggest that silicates must have been the dominant solids in the protoplanetary disk from which the planets of the Solar System formed, but no presolar silicates have been identified in chondrites. Here we report the in situ discovery of presolar silicate grains 0.1-1 microm in size in the matrices of two primitive carbonaceous chondrites. These grains are highly enriched in 17O (delta17O(SMOW) > 100-400 per thousand ), but have solar silicon isotopic compositions within analytical uncertainties, suggesting an origin in an oxygen-rich red giant or an asymptotic giant branch star. The estimated abundance of these presolar silicates (3-30 parts per million) is higher than reported for other types of presolar grains in meteorites, consistent with their ubiquity in the early Solar System, but is about two orders of magnitude lower than their abundance in anhydrous interplanetary dust particles. This result is best explained by the destruction of silicates during high-temperature processing in the solar nebula. PMID:15118720

  18. Metachronal beating of cilia under the influence of Casson fluid and magnetic field

    NASA Astrophysics Data System (ADS)

    Akbar, Noreen Sher; Khan, Zafar Hayat

    2015-03-01

    Metachronal beating of cilia under the influence of Casson fluid and magnetic field is considered. The model for cilia literature is modelled for the first time. The governing coupled equations are constructed under long wavelength and low Reynold's number approximation. Exact solutions are evaluated for stream function and pressure gradient. The important results in this study are the variation of the Hartmann number M, Casson fluid parameter ζ. The velocity field increases due to the increase in Hartmann number M near the channel walls while velocity field decreases at the center of the channel. Comparative study is also made for Casson fluid with Newtonian fluid.

  19. Metachronous Malignant Solitary Fibrous Tumor of Kidney: Case Report and Review of Literature.

    PubMed

    Cheung, Felix; Talanki, Varun R; Liu, Jingxuan; Davis, James E; Waltzer, Wayne C; Corcoran, Anthony T

    2016-01-01

    Solitary fibrous tumors are well described in the pleura, but rare extra-pleural neoplasms have been reported. We describe a patient with a solitary left renal fibrous tumor who after undergoing a nephrectomy, presented 8 years later with a contralateral metachronous solitary fibrous tumor. Malignant metastatic extra-pleural solitary fibrous tumors are extremely rare, and to our knowledge, this is the first case of contralateral recurrence of solitary renal fibrous tumor. The patient underwent a robotic assisted partial nephrectomy of the right renal mass. Both tumors showed overlapping histopathology. PMID:26793578

  20. Metachronous Malignant Solitary Fibrous Tumor of Kidney: Case Report and Review of Literature

    PubMed Central

    Cheung, Felix; Talanki, Varun R.; Liu, Jingxuan; Davis, James E.; Waltzer, Wayne C.; Corcoran, Anthony T.

    2015-01-01

    Solitary fibrous tumors are well described in the pleura, but rare extra-pleural neoplasms have been reported. We describe a patient with a solitary left renal fibrous tumor who after undergoing a nephrectomy, presented 8 years later with a contralateral metachronous solitary fibrous tumor. Malignant metastatic extra-pleural solitary fibrous tumors are extremely rare, and to our knowledge, this is the first case of contralateral recurrence of solitary renal fibrous tumor. The patient underwent a robotic assisted partial nephrectomy of the right renal mass. Both tumors showed overlapping histopathology. PMID:26793578

  1. Viscous shock profiles and primitive formulations

    NASA Technical Reports Server (NTRS)

    Karni, S.

    1990-01-01

    Weak solutions of hyperbolic systems in primitive (non-conservation) form for which a consistent conservation form exists are considered. It is shown that primitive formulations, shock relations are not uniquely defined by the states to either side of the shock but also depend on the viscous path connecting the two. Scheme-dependent high order correction terms are derived that enforce consistent viscous shock profiles. The resulting primitive algorithm is conservative to the order of approximation. One dimensional Euler calculations of flows containing strong shocks clearly show that conservation errors in primitive flow calculations are of comparable quality.

  2. Reflectance spectra of primitive chondrites

    NASA Astrophysics Data System (ADS)

    Trigo-Rodríguez, J. M.; Moyano-Cambero, C. E.; Llorca, J.

    2013-05-01

    We are studying a wide sample of pristine carbonaceous chondrites from the NASA Antarctic collection in order to get clues on the physico-chemical processes occurred in the parent bodies of these meteorites. We are obtaining laboratory reflectance spectra of different groups of carbonaceous chondrites, but here we focus in CM and CI chondrites. We discuss the main spectral features that can be used to identify primitive carbonaceous asteroids by remote sensing techniques. Two different spectrometers were used covering the entire 0.3 to 30 μm electromagnetic window. Only a handful of Near Earth Objects (NEOs) exhibit bands or features clearly associated with aqueous alteration. Among them are the target asteroids of Osiris Rex and Marco Polo-R missions.

  3. Filamentation as primitive growth mode?

    PubMed

    Bigan, Erwan; Steyaert, Jean-Marc; Douady, Stéphane

    2015-12-01

    Osmotic pressure influences cellular shape. In a growing cell, chemical reactions and dilution induce changes in osmolarity, which in turn influence the cellular shape. Using a protocell model relying upon random conservative chemical reaction networks with arbitrary stoichiometry, we find that when the membrane is so flexible that its shape adjusts itself quasi-instantaneously to balance the osmotic pressure, the protocell either grows filamentous or fails to grow. This behavior is consistent with a mathematical proof. This suggests that filamentation may be a primitive growth mode resulting from the simple physical property of balanced osmotic pressure. We also find that growth is favored if some chemical species are only present inside the protocell, but not in the outside growth medium. Such an insulation requires specific chemical schemes. Modern evolved cells such as E. coli meet these requirements through active transport mechanisms such as the phosphotransferase system. PMID:26718101

  4. Filamentation as primitive growth mode?

    NASA Astrophysics Data System (ADS)

    Bigan, Erwan; Steyaert, Jean-Marc; Douady, Stéphane

    2015-12-01

    Osmotic pressure influences cellular shape. In a growing cell, chemical reactions and dilution induce changes in osmolarity, which in turn influence the cellular shape. Using a protocell model relying upon random conservative chemical reaction networks with arbitrary stoichiometry, we find that when the membrane is so flexible that its shape adjusts itself quasi-instantaneously to balance the osmotic pressure, the protocell either grows filamentous or fails to grow. This behavior is consistent with a mathematical proof. This suggests that filamentation may be a primitive growth mode resulting from the simple physical property of balanced osmotic pressure. We also find that growth is favored if some chemical species are only present inside the protocell, but not in the outside growth medium. Such an insulation requires specific chemical schemes. Modern evolved cells such as E. coli meet these requirements through active transport mechanisms such as the phosphotransferase system.

  5. Advanced missions to primitive bodies

    NASA Technical Reports Server (NTRS)

    Yeomans, D. K.

    1985-01-01

    Six interplanetary spacecraft, three earth orbital experiments, and one spacecraft orbiting Venus will observe comets Halley and Giacobini-Zinner in 1985-86. At comet Halley, attempts will be made to image the nucleus, remote sensing will be made by spectrometers in wavelength ranges from the IR to the UV, and in-situ observations will be made with neutral, ion and dust mass spectrometers. Plasma measurements will be made at both comets and at comet Halley the upstream solar wind flux will be simultaneously monitored by nearby spacecraft. In the post-Halley era, there are several missions being planned for the continued exploration of the solar system's most primitive bodies - comets and asteroids.

  6. Propulsion of swimming microrobots inspired by metachronal waves in ciliates: from biology to material specifications.

    PubMed

    Palagi, Stefano; Jager, Edwin W H; Mazzolai, Barbara; Beccai, Lucia

    2013-12-01

    The quest for swimming microrobots originates from possible applications in medicine, especially involving navigation in bodily fluids. Swimming microorganisms have become a source of inspiration because their propulsion mechanisms are effective in the low-Reynolds number regime. In this study, we address a propulsion mechanism inspired by metachronal waves, i.e. the spontaneous coordination of cilia leading to the fast swimming of ciliates. We analyse the biological mechanism (referring to its particular embodiment in Paramecium caudatum), and we investigate the contribution of its main features to the swimming performance, through a three-dimensional finite-elements model, in order to develop a simplified, yet effective artificial design. We propose a bioinspired propulsion mechanism for a swimming microrobot based on a continuous cylindrical electroactive surface exhibiting perpendicular wave deformations travelling longitudinally along its main axis. The simplified propulsion mechanism is conceived specifically for microrobots that embed a micro-actuation system capable of executing the bioinspired propulsion (self-propelled microrobots). Among the available electroactive polymers, we select polypyrrole as the possible actuation material and we assess it for this particular embodiment. The results are used to appoint target performance specifications for the development of improved or new electroactive materials to attain metachronal-waves-like propulsion. PMID:24103844

  7. A manual for PARTI runtime primitives

    NASA Technical Reports Server (NTRS)

    Berryman, Harry; Saltz, Joel

    1990-01-01

    Primitives are presented that are designed to help users efficiently program irregular problems (e.g., unstructured mesh sweeps, sparse matrix codes, adaptive mesh partial differential equations solvers) on distributed memory machines. These primitives are also designed for use in compilers for distributed memory multiprocessors. Communications patterns are captured at runtime, and the appropriate send and receive messages are automatically generated.

  8. Apes, Primitives, Children and...Translators.

    ERIC Educational Resources Information Center

    Kozulin, Alex

    1993-01-01

    Reviews two books by L. S. Vygotsky and A. R. Luria: (1) "Studies on the History of Behavior: Ape, Primitive, and Child"; and (2) "Ape, Primitive Man and Child: Essays in the History of Behavior." Both books are based on a book published in 1930 that examined the phylogenetic, historical, and ontogenetic development of human behavior and…

  9. Primitive Societies, Social Studies: 6478.02.

    ERIC Educational Resources Information Center

    Friedman, Harrabey

    Junior high students examine selected primitive societies in this quinmester course. The concept of culture is defined and studied to expose similarities and differences between primitive and contemporary man and civilizations, not simply for greater understanding but also to permit further insight into American civilization. Both types of…

  10. Dynamic primitives in the control of locomotion

    PubMed Central

    Hogan, Neville; Sternad, Dagmar

    2013-01-01

    Humans achieve locomotor dexterity that far exceeds the capability of modern robots, yet this is achieved despite slower actuators, imprecise sensors, and vastly slower communication. We propose that this spectacular performance arises from encoding motor commands in terms of dynamic primitives. We propose three primitives as a foundation for a comprehensive theoretical framework that can embrace a wide range of upper- and lower-limb behaviors. Building on previous work that suggested discrete and rhythmic movements as elementary dynamic behaviors, we define submovements and oscillations: as discrete movements cannot be combined with sufficient flexibility, we argue that suitably-defined submovements are primitives. As the term “rhythmic” may be ambiguous, we define oscillations as the corresponding class of primitives. We further propose mechanical impedances as a third class of dynamic primitives, necessary for interaction with the physical environment. Combination of these three classes of primitive requires care. One approach is through a generalized equivalent network: a virtual trajectory composed of simultaneous and/or sequential submovements and/or oscillations that interacts with mechanical impedances to produce observable forces and motions. Reliable experimental identification of these dynamic primitives presents challenges: identification of mechanical impedances is exquisitely sensitive to assumptions about their dynamic structure; identification of submovements and oscillations is sensitive to their assumed form and to details of the algorithm used to extract them. Some methods to address these challenges are presented. Some implications of this theoretical framework for locomotor rehabilitation are considered. PMID:23801959

  11. [Clinical study of double primary cancer involving the lung in resected cases].

    PubMed

    Saito, H; Hai, E; Ito, Y; Matsunaga, Y; Kawahara, K; Sato, M

    2002-03-01

    Among all cases of surgically resected lung cancer, there were 56 cases (16.1%) of double primary cancer. The common sites of the other primary cancer was the stomach (19 cases), followed by large intestine (9 cases), urinary bladder (7 cases) and pharinx-larynx (7 cases). One patient had triple cancers. In all cases of double primary cancer, 46 cases were metachronous, 10 of which were cases of initial lung cancer. The 5-year survival rate of double primary cancer was 39.7%. Good result was obtained in metachronous cases with initial lung cancer. Most of prognosis of double primary cancer was determined by that of lung cancer. In more than half of initial cancer, the second primary cancer was detected by symptoms. So, special attention to the possibility of double primary cancer in patients with resected lung cancer is necessary for improvement of prognosis. PMID:11889804

  12. Repeated pancreatectomy for metachronous duodenal and pancreatic metastases of renal cell carcinoma.

    PubMed

    Hata, Tatsuo; Sakata, Naoaki; Aoki, Takeshi; Yoshida, Hiroshi; Kanno, Atsushi; Fujishima, Fumiyoshi; Motoi, Fuyuhiko; Masamune, Atsushi; Shimosegawa, Tooru; Unno, Michiaki

    2013-01-01

    A 50-year-old woman had undergone left nephrectomy for renal cell carcinoma 13 years previously. Ten years later, a solitary metastatic tumor had been detected in the pancreatic tail and she had undergone subsequent resection of the pancreatic tail and spleen. Three years after surgery, she was admitted to our hospital for severe anemia resulting from gastrointestinal tract bleeding. Esophagogastroduodenoscopy revealed a 3-cm solid tumor at the oral side of the papilla of Vater. Histology of the bioptic duodenal tissue revealed inflammatory granulation without malignancy. Computed tomography showed a well-contrasted hypervascular tumor in the descending portion of the duodenum. We diagnosed the patient with metachronous duodenal metastasis of renal cell carcinoma and performed a pancreaticoduodenectomy. An ulcerated polypoid mass was detected at the oral side of the papilla of Vater. Histology revealed clear cell carcinoma coated by granulation tissue across the surface of the tumor. Immunohistology demonstrated that the cells were positive for vimentin, CD10 and epithelial membrane antigen and negative for CK7. After a repeated pancreatectomy, the patient had no symptoms of gastrointestinal bleeding and maintained good glucose tolerance without insulin therapy because the remnant pancreas functioned well. In conclusion, for the diagnosis of patients who have previously undergone nephrectomy and present with gastrointestinal bleeding, the possibility of metastasis to the gastrointestinal tract, including the duodenum, should be considered. With respect to surgical treatment, the pancreas should be minimally resected to maintain a free surgical margin during the first surgery taking into account further metachronous metastasis to the duodenum and pancreas. PMID:24403883

  13. BLACK RANGE PRIMITIVE AREA, NEW MEXICO.

    USGS Publications Warehouse

    Ericksen, George E.; Leland, George R.

    1984-01-01

    A study of the Black Range Primitive Area, New Mexico indicated that the area had little promise for the occurrence of mineral resources. A few miles north of the area, a unit of rhyolite in the otherwise barren volcanic rocks of the Mogollon-Datil volcanic field contains local concentrations of the tin mineral cassiterite, and streams draining outcrop areas of this rhyolite within the primitive area may contain very small cassiterite placer deposits. None were observed in this study and no resource potential was identified. Paleozoic sedimentary rocks and Precambrian granitic and metamorphic rocks exposed just east and south of the primitive area contain small polymetallic deposits with varying amounts of silver, lead, zinc, copper, and gold. These same rocks lie beneath the volcanic cover within the primitive area and are likely to contain similar deposits, but no resource potential was identified.

  14. Characteristic Spaces Emerging from Primitive Chaos

    NASA Astrophysics Data System (ADS)

    Ogasawara, Yoshihito; Oishi, Shin'ichi

    2014-01-01

    This paper describes the emergence of two characteristic notions, nondegenerate Peano continuum and Cantor set, by the exploration of the essence of the existence of primitive chaos from a topological viewpoint. The primitive chaos is closely related to vital problems in physics itself and leads to chaotic features under natural conditions. The nondegenerate Peano continuum represents an ordinarily observed space, and the existence of a single nondegenerate Peano continuum guarantees the existence of infinite varieties of the primitive chaos leading to the chaos. This result provides an explanation of the reason why we are surrounded by diverse chaotic behaviors. Also, the Cantor set is a general or universal notion different from the special set, the Cantor middle-third set, and the existence of a single Cantor set guarantees infinite varieties of the primitive chaos leading to the chaos. This analogy implies the potential of the Cantor set for the method of new recognizing physical phenomena.

  15. A method of plane geometry primitive presentation

    NASA Astrophysics Data System (ADS)

    Jiao, Anbo; Luo, Haibo; Chang, Zheng; Hui, Bin

    2014-11-01

    Point feature and line feature are basic elements in object feature sets, and they play an important role in object matching and recognition. On one hand, point feature is sensitive to noise; on the other hand, there are usually a huge number of point features in an image, which makes it complex for matching. Line feature includes straight line segment and curve. One difficulty in straight line segment matching is the uncertainty of endpoint location, the other is straight line segment fracture problem or short straight line segments joined to form long straight line segment. While for the curve, in addition to the above problems, there is another difficulty in how to quantitatively describe the shape difference between curves. Due to the problems of point feature and line feature, the robustness and accuracy of target description will be affected; in this case, a method of plane geometry primitive presentation is proposed to describe the significant structure of an object. Firstly, two types of primitives are constructed, they are intersecting line primitive and blob primitive. Secondly, a line segment detector (LSD) is applied to detect line segment, and then intersecting line primitive is extracted. Finally, robustness and accuracy of the plane geometry primitive presentation method is studied. This method has a good ability to obtain structural information of the object, even if there is rotation or scale change of the object in the image. Experimental results verify the robustness and accuracy of this method.

  16. Metachronous carcinoma of rectum with reconstruction of a full-thickness abdominal wall defect using a pedicled anterolateral thigh flap

    PubMed Central

    Kok, Amy Siu Yan

    2016-01-01

    Reconstruction of large, complex defects of the abdominal wall after resection of malignant tumors can be challenging. The transfer of an anterolateral thigh (ALT) flap is a feasible and effective option. However, no report has been published on the use of ALT flap after metachronous colonic tumor resection so far. We present an original case of resection of metachronous carcinoma of rectum with reconstruction of the abdominal wall defect using an ALT flap harvested with its aponeurosis. The postoperative course was uncomplicated. Functional and esthetic results were satisfactory. There was no postoperative incisional hernia or tumor recurrence. We conclude that abdominal wall defects of large sizes can be successfully reconstructed using an appropriately designed ALT flap; a simple, single-stage effective reconstruction. PMID:27161142

  17. BRAF mutation in multiple primary cancer with colorectal cancer and stomach cancer

    PubMed Central

    Lee, Seung-Hyun; Ahn, Byung-Kwon; Baek, Sung-Uhn; Chang, Hee-Kyung

    2013-01-01

    Aims: Recently, BRAF mutation testing has been introduced as a marker in differentiating Lynch syndrome from sporadic colorectal cancers or in predicting colorectal cancers with worse prognosis. Individuals with hereditary predisposition to cancer development are at an increased risk of developing multiple primary cancers. The purpose of this study is to identify mutation in the BRAF gene in multiple primary cancers with colorectal cancer and stomach cancer. Methods: BRAF mutation was analysed in 45 patients with colorectal cancer and stomach cancer, synchronously or metachronously. Results: Mean age was 64.07 years (range: 47–83 years). For the colorectal cancer, tumors were located at the sigmoid colon in eight patients (17.8%) and at the rectum in 22 patients (48.9%). Twenty-three patients (51.1%) had synchronous cancer. Four patients (8.9%) had family members with cancer. BRAF mutation was identified in three patients (6.7%). All three of these patients had metachronous cancers. The colorectal cancers were located in the sigmoid colon (1 patient) and the rectum (2 patients). Conclusions: BRAF mutation rate was low in the multiple primary cancer with colorectal cancer and stomach cancer. With only BRAF gene study, it was not possible to identify any correlation with family history of colorectal cancer. Further study means considering other genes – MSI, MSH2, MLH1, MSH6. PMID:24759670

  18. Primitive and definitive erythropoiesis in mammals

    PubMed Central

    Palis, James

    2013-01-01

    Red blood cells (RBCs), which constitute the most abundant cell type in the body, come in two distinct flavors- primitive and definitive. Definitive RBCs in mammals circulate as smaller, anucleate cells during fetal and postnatal life, while primitive RBCs circulate transiently in the early embryo as large, nucleated cells before ultimately enucleating. Both cell types are formed from lineage-committed progenitors that generate a series of morphologically identifiable precursors that enucleate to form mature RBCs. While definitive erythroid precursors mature extravascularly in the fetal liver and postnatal marrow in association with macrophage cells, primitive erythroid precursors mature as a semi-synchronous cohort in the embryonic bloodstream. While the cytoskeletal network is critical for the maintenance of cell shape and the deformability of definitive RBCs, little is known about the components and function of the cytoskeleton in primitive erythroblasts. Erythropoietin (EPO) is a critical regulator of late-stage definitive, but not primitive, erythroid progenitor survival. However, recent studies indicate that EPO regulates multiple aspects of terminal maturation of primitive murine and human erythroid precursors, including cell survival, proliferation, and the rate of terminal maturation. Primitive and definitive erythropoiesis share central transcriptional regulators, including Gata1 and Klf1, but are also characterized by the differential expression and function of other regulators, including myb, Sox6, and Bcl11A. Flow cytometry-based methodologies, developed to purify murine and human stage-specific erythroid precursors, have enabled comparative global gene expression studies and are providing new insights into the biology of erythroid maturation. PMID:24478716

  19. Metachronous Bilateral Testicular Leydig-Like Tumors Leading to the Diagnosis of Congenital Adrenal Hyperplasia (Adrenogenital Syndrome)

    PubMed Central

    Vukina, Josip; Chism, David D.; Sharpless, Julie L.; Raynor, Mathew C.; Milowsky, Matthew I.; Funkhouser, William K.

    2015-01-01

    A 33-year-old male with a history of left testis Leydig cell tumor (LCT), 3-month status after left radical orchiectomy, presented with a rapidly enlarging (0.6 cm to 3.7 cm) right testicular mass. He underwent a right radical orchiectomy, sections interpreted as showing a similar Leydig cell-like oncocytic proliferation, with a differential diagnosis including metachronous bilateral LCT and metachronous bilateral testicular tumors associated with congenital adrenal hyperplasia (a.k.a. “testicular adrenal rest tumors” (TARTs) and “testicular tumors of the adrenogenital syndrome” (TTAGS)). Additional workup demonstrated a markedly elevated serum adrenocorticotropic hormone (ACTH) and elevated adrenal precursor steroid levels. He was diagnosed with congenital adrenal hyperplasia, 3β-hydroxysteroid dehydrogenase deficiency (3BHSD) type, and started on treatment. Metachronous bilateral testicular masses in adults should prompt consideration of adult presentation of CAH. Since all untreated CAH patients are expected to have elevated serum ACTH, formal exclusion of CAH prior to surgical resection of a testicular Leydig-like proliferation could be accomplished by screening for elevated serum ACTH. PMID:26351608

  20. MACOP modular architecture with control primitives.

    PubMed

    Waegeman, Tim; Hermans, Michiel; Schrauwen, Benjamin

    2013-01-01

    Walking, catching a ball and reaching are all tasks in which humans and animals exhibit advanced motor skills. Findings in biological research concerning motor control suggest a modular control hierarchy which combines movement/motor primitives into complex and natural movements. Engineers inspire their research on these findings in the quest for adaptive and skillful control for robots. In this work we propose a modular architecture with control primitives (MACOP) which uses a set of controllers, where each controller becomes specialized in a subregion of its joint and task-space. Instead of having a single controller being used in this subregion [such as MOSAIC (modular selection and identification for control) on which MACOP is inspired], MACOP relates more to the idea of continuously mixing a limited set of primitive controllers. By enforcing a set of desired properties on the mixing mechanism, a mixture of primitives emerges unsupervised which successfully solves the control task. We evaluate MACOP on a numerical model of a robot arm by training it to generate desired trajectories. We investigate how the tracking performance is affected by the number of controllers in MACOP and examine how the individual controllers and their generated control primitives contribute to solving the task. Furthermore, we show how MACOP compensates for the dynamic effects caused by a fixed control rate and the inertia of the robot. PMID:23888140

  1. Primitive African Medical Lore and Witchcraft *

    PubMed Central

    Thompson, Ethel E.

    1965-01-01

    This article presents a comprehensive study of the methods, practices, equipment, and paraphernalia of African witch doctors in carrying out primitive medical practices. The chief tribes studied are the Azandes of the Sudan, the Manos of Liberia, the Congo tribes, the Bundas of Angola, and the Zulus and other Bantu tribes of South Africa. Primitive beliefs and customs are discussed only insofar as they have a direct bearing on medical practices. The medical practices considered deal mainly with the application of general remedies for ailments and diseases, but certain specialized fields such as obstetrics, surgery, treatment for fractures, and dentistry are also included. Primitive medicaments are presented with reference to their application for various illnesses. An alphabetical list of these medicaments is given at the end of the article. PMID:14223742

  2. PRIMitive Asteroids Spectroscopic Survey - PRIMASS: First Results

    NASA Astrophysics Data System (ADS)

    de Leon, Julia; Pinilla-Alonso, Noemi; Campins, Humberto; Lorenzi, Vania; Licandro, Javier; Morate, David; Tanga, Paolo; Cellino, Alberto; Delbo, Marco

    2015-11-01

    NASA OSIRIS-REx and JAXA Hayabusa 2 sample-return missions have targeted two near-Earth asteroids: (101955) Bennu and (162173) 1999 JU3, respectively. These are primitive asteroids that are believed to originate in the inner belt, where five distinct sources have been identified: four primitive collisional families (Polana, Erigone, Sulamitis, and Clarissa), and a population of low-albedo and low-inclination background asteroids. Identifying and characterizing the populations from which these two NEAs might originate will enchance the science return of the two missions.With this main objective in mind, we initiated in 2010 a spectroscopic survey in the visible and the near-infrared to characterize the primitive collisional families in the inner belt and the low-albedo background population. This is the PRIMitive Asteroids Spectroscopic Survey - PRIMASS. So far we have obtained more than 200 spectra using telescopes located at different observatories. PRIMASS uses a variety of ground based facilities. Most of the spectra have been obtained using the 10.4m Gran Telescopio Canarias (GTC), and the 3.6m Telescopio Nazionale Galileo (TNG), both located at the El Roque de los Muchachos Observatory (La Palma, Spain), and the 3.0m NASA Infrared Telescope Facility on Mauna Kea (Hawai, USA).We present the first results from our on-going survey (de Leon et al. 2015; Pinilla-Alonso et al. 2015; Morate et al. 2015), focused on the Polana and the Erigone primitive families, with visible and near-infrared spectra of more than 200 objects, most of them with no previous spectroscopic data. Our survey is already the largest database of primitive asteroids spectra, and we keep obtaining data on the Sulamitis and the Clarissa families, as well as on the background low-albedo population.

  3. Chemical evolution of primitive solar system bodies

    NASA Technical Reports Server (NTRS)

    Oro, J.; Mills, T.

    1989-01-01

    Observations on organic molecules and compounds containing biogenic elements in the interstellar medium and in the primitive bodies of the solar system are reviewed. The discovery of phosphorus molecular species in dense interstellar clouds, the existence of organic ions in the dust and gas phase of the comas of Comet Halley, and the presence of presolar, deuterium-hydrogen ratios in the amino acids of carbonaceous chondrites are discussed. The relationships between comets, dark asteroids, and carbonaceous chondrites are examined. Also, consideration is given to the chemical evolution of Titan, the primitive earth, and early Mars.

  4. Effect of metachronal phasing on the pumping efficiency of oscillating plate arrays

    NASA Astrophysics Data System (ADS)

    Larson, Mary; Kiger, Ken T.; Abdelaziz, Khaled; Balaras, Elias

    2014-05-01

    A programmable oscillating plate array was constructed in order to study the detailed hydrodynamics of external pumping by a series of oscillating plates at Reynolds numbers on the order of 10. The array was modeled after the geometry and kinematics found in the nymphal mayfly (Ephemeroptera) Centroptilum triangulifer, and consisted of five plates, each of which could be actuated independently for stroke and pitch. Scaled tests were performed at a Reynolds number, Re = fL {g/2}/ ν = 18, with a single stroke kinematic pattern modeled after the living animal. In mayflies, and in many other oscillating plate systems, an antiplectic metachronal wave is used with a phase delay of approximately 90°, which corresponds to a travelling wave that moves from posterior to anterior with a wavelength of approximately four plates. In order to better understand possible reasons for why the animal system might favor the observed phase lag, ensemble-correlation stereo PIV measurements were made to reconstruct the unsteady three-dimensional phase averaged flow field at a resolution that allowed a uniform and converged estimate of the net pumped flux and the total energy dissipation within and around the vicinity of the gill array. The results indicate that the baseline case offered an optimal spot in the mass flux of fluid pumped through the array per unit energy expended, while also providing a great deal of flexibility in modifying the stroke amplitude without interference effects from adjacent gills.

  5. Laparoscopic adrenalectomy for metachronous ipsilateral metastasis following nephrectomy for renal cell carcinoma

    PubMed Central

    Eret, Viktor; Ürge, Tomáš; Trávníček, Ivan; Chudáček, Zdeněk; Hes, Ondřej; Hora, Milan

    2013-01-01

    Introduction Although laparoscopic adrenalectomy (LA) is considered as a gold standard approach for adrenalectomy, there are minimal data describing options and outcomes of LA after previous ipsilateral nephrectomy (PIN). Aim To describe our results in a group of patients who underwent LA after PIN. Material and methods From August 2004 to October 2012 we performed at our institution 88 LA. Of this amount we performed 5 LA for metachronous metastasis of renal cell carcinoma (RCC) after PIN. This group was compared to a group without previous nephrectomy. Results The group comprised 4 men (80%) and 1 woman (20%); the mean age at the time of surgery was 66.8 ±8.5 (range: 60-77) years; the mean period between nephrectomy and adrenalectomy was 5.2 (range: 1.5-14) years; the operating time was longer in patients after PIN for 7 min; the mean blood loss was higher by 22 ml; duration of hospitalization was shorter by 1.3 days, paradoxically, compared with patients without PIN. There was no need for conversion to open surgery and we did not observe any other complications. Conclusions Laparoscopic adrenalectomy for metastasis of RCC after PIN is a technically feasible method in selected patients and it is associated with no significant differences in perioperative data in comparison with the group without prior nephrectomy. The patients benefit from minimally invasive surgery. The performance has required an experienced laparoscopic surgeon. PMID:24130636

  6. Melville and the Tradition of Primitive Utopia.

    ERIC Educational Resources Information Center

    Beauchamp, Gorman

    1981-01-01

    Discusses the relationships among the myth of the Golden Age, the concept of the Noble Savage, and the dream of Utopia. Uses Lewis Mumford's division of utopias into two basic types, i.e., reconstruction and escape utopias, to examine Herman Melville's "Typee" as an example of the primitive escapist utopia. (Editor/DMM)

  7. Hepatic adenomas with synchronous or metachronous fibrolamellar carcinomas: both are characterized by LFABP loss.

    PubMed

    Graham, Rondell P; Terracciano, Luigi M; Meves, Alexander; Vanderboom, Patrick M; Dasari, Surendra; Yeh, Matthew M; Torbenson, Michael S; Cruise, Michael W

    2016-06-01

    Rare hepatic adenomas are associated with synchronous or metachronous fibrolamellar carcinomas. The morphology of these adenomas has not been well described and they have not been subclassifed using the current molecular classification schema. We examined four hepatic adenomas co-occurring with or preceding a diagnosis of fibrolamellar carcinoma in three patients. On histological examination, three of the adenomas showed the typical morphology of HNF1-α inactivated adenomas, whereas one showed a myxoid adenoma morphology. All of the adenomas were negative for PRKACA rearrangements by Fluorescence in situ Hybridization (FISH) analysis. All four of the adenomas showed complete loss or significant reduction of liver fatty acid binding protein (LFABP) expression by immunohistochemistry. Interestingly, the fibrolamellar carcinomas in each case also showed loss of LFABP by immunohistochemistry. One of the fibrolamellar carcinomas was negative for PRKACA rearrangements by FISH, whereas the others were positive. To investigate if LFBAP loss is typical of fibrolamellar carcinomas in general, an additional cohort of tumors was studied (n=19). All 19 fibrolamellar carcinomas showed the expected PRKACA rearrangements and immunostains showed loss of LFABP in each case, consistent with HNF1-α inactivation. To validate this observation, mass spectrometry-based proteomics was performed on tumor-normal pairs of six fibrolamellar carcinomas and showed an average 10-fold reduction in LFABP protein levels, compared with matched normal liver tissue. In conclusion, hepatic adenomas co-occurring with fibrolamellar carcinomas show LFABP loss and are negative for PRKACA rearrangements, indicating they are genetically distinct lesions. These data also demonstrate that LFABP loss, which characterizes HNF1-α inactivation, is a consistent feature of fibrolamellar carcinoma, indicating HNF1-α inactivation is an important event in fibrolamellar carcinoma pathogenesis. PMID:27015136

  8. Starting with Complex Primitives Pays Off: Complicate Locally, Simplify Globally

    ERIC Educational Resources Information Center

    Joshi, Aravind K.

    2004-01-01

    In setting up a formal system to specify a grammar formalism, the conventional (mathematical) wisdom is to start with primitives (basic primitive structures) as simple as possible, and then introduce various operations for constructing more complex structures. An alternate approach is to start with complex (more complicated) primitives, which…

  9. 36 CFR 293.17 - National Forest Primitive Areas.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 36 Parks, Forests, and Public Property 2 2014-07-01 2014-07-01 false National Forest Primitive Areas. 293.17 Section 293.17 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE WILDERNESS-PRIMITIVE AREAS § 293.17 National Forest Primitive Areas. (a) Within those areas...

  10. 36 CFR 293.17 - National Forest Primitive Areas.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 36 Parks, Forests, and Public Property 2 2012-07-01 2012-07-01 false National Forest Primitive Areas. 293.17 Section 293.17 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE WILDERNESS-PRIMITIVE AREAS § 293.17 National Forest Primitive Areas. (a) Within those areas...

  11. 36 CFR 293.17 - National Forest Primitive Areas.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false National Forest Primitive Areas. 293.17 Section 293.17 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE WILDERNESS-PRIMITIVE AREAS § 293.17 National Forest Primitive Areas. (a) Within those areas...

  12. 36 CFR 293.17 - National Forest Primitive Areas.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 36 Parks, Forests, and Public Property 2 2013-07-01 2013-07-01 false National Forest Primitive Areas. 293.17 Section 293.17 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE WILDERNESS-PRIMITIVE AREAS § 293.17 National Forest Primitive Areas. (a) Within those areas...

  13. 36 CFR 293.17 - National Forest Primitive Areas.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 36 Parks, Forests, and Public Property 2 2011-07-01 2011-07-01 false National Forest Primitive Areas. 293.17 Section 293.17 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE WILDERNESS-PRIMITIVE AREAS § 293.17 National Forest Primitive Areas. (a) Within those areas...

  14. Survival of the primitive mantle reservoir?

    NASA Astrophysics Data System (ADS)

    Huang, S.; Jacobsen, S. B.; Mukhopadhyay, S.

    2010-12-01

    The high-3He lavas are thought to originate from a deep primitive mantle source that has not been much modified since the formation of Earth’s core. Comparison of 4He/3He in MORBs and plume lavas indicate that the plume sources must be a lower mantle feature, in agreement with most geophysical inferences. However, the lithophile element isotope systems of plume lavas are not primitive. The idea that the high-3He source is significantly less processed and more primitive than MORB source is clearly supported by mixing trends in plots of 4He/3He versus Sr, Nd and Pb isotope ratios, which have been extrapolated to an inferred 4He/3He of ~17,000 (~43x the atmospheric ratio), a mantle reservoir named PHEM (Primitive HElium Mantle). Slightly lower 4He/3He, ~15,000, were reported for Baffin Island picrites. Recently, Jackson et al. (2010) claimed that some Baffin Island and Greenland picrites with single-stage Pb model ages of ~4.5 Ga have low 4He/3He, and argued that “their source is the most ancient accessible reservoir in the Earth’s mantle, and it may be parental to all mantle reservoirs”. However, the available data are insufficient to make such a claim, and we suggest an alternative interpretation. Specially: 1. Four out of ten Baffin Island and Greenland picrites used by Jackson et al. (2010) have 4He/3He higher than average MORB value and all are far removed from the lowest measured value of 15,000. 2. Five Greenland picrites which cluster around the 4.50 Gyr geochron (Jackson et al., 2010) form a curved 207Pb*/206Pb*-4He/3He trend. This trend is best explained as a mixing line, implying that the single-stage Pb ages of these lavas are meaningless. 3. In a 207Pb*/206Pb*-4He/3He plot, Koolau lavas from Hawaii overlap with Baffin Island and Greenland picrites. If Baffin Island and Greenland picrites represent melts from the primitive mantle based on their Pb and He isotopes (Jackson et al., 2010), a similar argument can be applied to Koolau lavas. However, it

  15. Chemical evolution of primitive solar system bodies.

    PubMed

    Oró, J; Mills, T

    1989-01-01

    In this paper we summarize some of the most salient observations made recently on the organic molecules and other compounds of the biogenic elements present in the interstellar medium and in the primitive bodies of the solar system. They include the discovery of the first phosphorus molecular species in dense interstellar clouds, the presence of complex organic ions in the dust and gas phase of Halley's coma, the finding of unusual, probably presolar, deuterium-hydrogen ratios in the amino acids of carbonaceous chondrites, and new developments on the chemical evolution of Titan, the primitive Earth, and early Mars. Some of the outstanding problems concerning the synthesis of organic molecules on different cosmic bodies are also discussed from an exobiological perspective. PMID:11537358

  16. Deictic primitives for general purpose navigation

    NASA Technical Reports Server (NTRS)

    Crismann, Jill D.

    1994-01-01

    A visually-based deictic primative used as an elementary command set for general purpose navigation was investigated. It was shown that a simple 'follow your eyes' scenario is sufficient for tracking a moving target. Limitations of velocity, acceleration, and modeling of the response of the mechanical systems were enforced. Realistic paths of the robots were produced during the simulation. Scientists could remotely command a planetary rover to go to a particular rock formation that may be interesting. Similarly an expert at plant maintenance could obtain diagnostic information remotely by using deictic primitives on a mobile are used in the deictic primitives, we could imagine that the exact same control software could be used for all of these applications.

  17. Two Beyond-primitive Extrasolar Planetesimals

    NASA Astrophysics Data System (ADS)

    Xu, S.; Jura, M.; Klein, B.; Koester, D.; Zuckerman, B.

    2013-04-01

    Using the Cosmic Origins Spectrograph on board the Hubble Space Telescope, we have obtained high-resolution ultraviolet observations of GD 362 and PG 1225-079, two helium-dominated, externally polluted white dwarfs. We determined or placed useful upper limits on the abundances of two key volatile elements, carbon and sulfur, in both stars; we also constrained the zinc abundance in PG 1225-079. In combination with previous optical data, we find strong evidence that each of these two white dwarfs has accreted a parent body that has evolved beyond primitive nebular condensation. The planetesimal that accreted onto GD 362 had a bulk composition roughly similar to that of a mesosiderite meteorite based on a reduced chi-squared comparison with solar system objects; however, additional material is required to fully reproduce the observed mid-infrared spectrum for GD 362. No single meteorite can reproduce the unique abundance pattern observed in PG 1225-079; the best fit model requires a blend of ureilite and mesosiderite material. From a compiled sample of nine well-studied polluted white dwarfs, we find evidence for both primitive planetesimals, which are a direct product from nebular condensation, as well as beyond-primitive planetesimals, whose final compositions were mainly determined by post-nebular processing.

  18. Trace element distributions in primitive achondrites

    NASA Technical Reports Server (NTRS)

    Davis, Andrew M.; Prinz, Martin; Weisberg, Michael K.

    1993-01-01

    The primitive achondrites have approximately chondritic bulk chemical composition but achondritic textures. Clayton et al. show that nine of these meteorites, the acapulcoites and the lodranites, have similar oxygen isotopic compositions. The acapulcoites appear to be highly metamorphosed, but undifferentiated meteorites of chondritic composition; whereas, the lodranites appear to have lost a feldspathic partial melt. In order to learn more about metamorphic processes and partial melt removal, we have measured the trace element compositions of constituent phases of a number of primitive achondrites by ion microprobe. We have analyzed two acapulcoites, Acapulco and ALH81261 (paired with ALH77081), and three londranites, Lodran, LEW88280, and MAC88177. In addition, we analyzed LEW88663, which has the bulk composition, mineral chemistry, and oxygen isotopic composition of L-chondrites, but is metal-free and has an achondrite texture; and Divnoe, a plagioclase-poor, olivine-rich primitive achondrite with an oxygen isotopic composition similar to that of the group IAB iron meteorites. These meteorites show a variety of REE patterns in their constituent phases, and there are consistent differences between acapulcoites and lodranites that are consistent with removal of a LREE- and Eu-enriched melt that is apparently responsible for the low plagioclase content of lodranites.

  19. TWO BEYOND-PRIMITIVE EXTRASOLAR PLANETESIMALS

    SciTech Connect

    Xu, S.; Jura, M.; Klein, B.; Zuckerman, B.; Koester, D. E-mail: jura@astro.ucla.edu E-mail: ben@astro.ucla.edu

    2013-04-01

    Using the Cosmic Origins Spectrograph on board the Hubble Space Telescope, we have obtained high-resolution ultraviolet observations of GD 362 and PG 1225-079, two helium-dominated, externally polluted white dwarfs. We determined or placed useful upper limits on the abundances of two key volatile elements, carbon and sulfur, in both stars; we also constrained the zinc abundance in PG 1225-079. In combination with previous optical data, we find strong evidence that each of these two white dwarfs has accreted a parent body that has evolved beyond primitive nebular condensation. The planetesimal that accreted onto GD 362 had a bulk composition roughly similar to that of a mesosiderite meteorite based on a reduced chi-squared comparison with solar system objects; however, additional material is required to fully reproduce the observed mid-infrared spectrum for GD 362. No single meteorite can reproduce the unique abundance pattern observed in PG 1225-079; the best fit model requires a blend of ureilite and mesosiderite material. From a compiled sample of nine well-studied polluted white dwarfs, we find evidence for both primitive planetesimals, which are a direct product from nebular condensation, as well as beyond-primitive planetesimals, whose final compositions were mainly determined by post-nebular processing.

  20. Dimensional Analysis Using Toric Ideals: Primitive Invariants

    PubMed Central

    Atherton, Mark A.; Bates, Ronald A.; Wynn, Henry P.

    2014-01-01

    Classical dimensional analysis in its original form starts by expressing the units for derived quantities, such as force, in terms of power products of basic units etc. This suggests the use of toric ideal theory from algebraic geometry. Within this the Graver basis provides a unique primitive basis in a well-defined sense, which typically has more terms than the standard Buckingham approach. Some textbook examples are revisited and the full set of primitive invariants found. First, a worked example based on convection is introduced to recall the Buckingham method, but using computer algebra to obtain an integer matrix from the initial integer matrix holding the exponents for the derived quantities. The matrix defines the dimensionless variables. But, rather than this integer linear algebra approach it is shown how, by staying with the power product representation, the full set of invariants (dimensionless groups) is obtained directly from the toric ideal defined by . One candidate for the set of invariants is a simple basis of the toric ideal. This, although larger than the rank of , is typically not unique. However, the alternative Graver basis is unique and defines a maximal set of invariants, which are primitive in a simple sense. In addition to the running example four examples are taken from: a windmill, convection, electrodynamics and the hydrogen atom. The method reveals some named invariants. A selection of computer algebra packages is used to show the considerable ease with which both a simple basis and a Graver basis can be found. PMID:25436774

  1. Patch-primitive driven compressive ghost imaging.

    PubMed

    Hu, Xuemei; Suo, Jinli; Yue, Tao; Bian, Liheng; Dai, Qionghai

    2015-05-01

    Ghost imaging has rapidly developed for about two decades and attracted wide attention from different research fields. However, the practical applications of ghost imaging are still largely limited, by its low reconstruction quality and large required measurements. Inspired by the fact that the natural image patches usually exhibit simple structures, and these structures share common primitives, we propose a patch-primitive driven reconstruction approach to raise the quality of ghost imaging. Specifically, we resort to a statistical learning strategy by representing each image patch with sparse coefficients upon an over-complete dictionary. The dictionary is composed of various primitives learned from a large number of image patches from a natural image database. By introducing a linear mapping between non-overlapping image patches and the whole image, we incorporate the above local prior into the convex optimization framework of compressive ghost imaging. Experiments demonstrate that our method could obtain better reconstruction from the same amount of measurements, and thus reduce the number of requisite measurements for achieving satisfying imaging quality. PMID:25969205

  2. Self assembly properties of primitive organic compounds

    NASA Technical Reports Server (NTRS)

    Deamer, D. W.

    1991-01-01

    A central event in the origin of life was the self-assembly of amphiphilic, lipid-like compounds into closed microenvironments. If a primitive macromolecular replicating system could be encapsulated within a vesicular membrane, the components of the system would share the same microenvironment, and the result would be a step toward true cellular function. The goal of our research has been to determine what amphiphilic molecules might plausibly have been available on the early Earth to participate in the formation of such boundary structures. To this end, we have investigated primitive organic mixtures present in carbonaceous meteorites such as the Murchison meteorite, which contains 1-2 percent of its mass in the form of organic carbon compounds. It is likely that such compounds contributed to the inventory of organic carbon on the prebiotic earth, and were available to participate in chemical evolution leading to the emergence of the first cellular life forms. We found that Murchison components extracted into non-polar solvent systems are surface active, a clear indication of amphiphilic character. One acidic fraction self-assembles into vesicular membranes that provide permeability barriers to polar solutes. Other evidence indicates that the membranes are bimolecular layers similar to those formed by contemporary membrane lipids. We conclude that bilayer membrane formation by primitive amphiphiles on the early Earth is feasible. However, only a minor fraction of acidic amphiphiles assembles into bilayers, and the resulting membranes require narrowly defined conditions of pH and ionic composition to be stable. It seems unlikely, therefore, that meteoritic infall was a direct source of membrane amphiphiles. Instead, the hydrocarbon components and their derivatives more probably would provide an organic stock available for chemical evolution. Our current research is directed at possible reactions which would generate substantial quantities of membranogenic

  3. Dimensional analysis using toric ideals: primitive invariants.

    PubMed

    Atherton, Mark A; Bates, Ronald A; Wynn, Henry P

    2014-01-01

    Classical dimensional analysis in its original form starts by expressing the units for derived quantities, such as force, in terms of power products of basic units [Formula: see text] etc. This suggests the use of toric ideal theory from algebraic geometry. Within this the Graver basis provides a unique primitive basis in a well-defined sense, which typically has more terms than the standard Buckingham approach. Some textbook examples are revisited and the full set of primitive invariants found. First, a worked example based on convection is introduced to recall the Buckingham method, but using computer algebra to obtain an integer [Formula: see text] matrix from the initial integer [Formula: see text] matrix holding the exponents for the derived quantities. The [Formula: see text] matrix defines the dimensionless variables. But, rather than this integer linear algebra approach it is shown how, by staying with the power product representation, the full set of invariants (dimensionless groups) is obtained directly from the toric ideal defined by [Formula: see text]. One candidate for the set of invariants is a simple basis of the toric ideal. This, although larger than the rank of [Formula: see text], is typically not unique. However, the alternative Graver basis is unique and defines a maximal set of invariants, which are primitive in a simple sense. In addition to the running example four examples are taken from: a windmill, convection, electrodynamics and the hydrogen atom. The method reveals some named invariants. A selection of computer algebra packages is used to show the considerable ease with which both a simple basis and a Graver basis can be found. PMID:25436774

  4. Suprasellar Primitive Neuroectodermal Tumor in an Adult.

    PubMed

    Espino Barros Palau, Angelina; Khan, Khurrum; Morgan, Michael L; Powell, Suzanne Z; Lee, Andrew G

    2016-09-01

    Primitive neuroectodermal tumors (PNET) of the central nervous system (CNS) are a heterogeneous group of embryonal malignancies that are composed of undifferentiated or poorly differentiated neuroepithelial cells. Supratentorial PNET is the second most common CNS embryonal malignancy in children, but it is rare in adults. We report the case of a 31-year-old woman with bilateral vision loss and a bitemporal hemianopia. Neuroimaging revealed a suprasellar mass, and pathology was consistent with PNET. After surgical debulking of the tumor followed by radiation therapy and chemotherapy, the patient had significant visual recovery and remained stable over 14 months of follow-up. PMID:26517622

  5. The organic inventory of primitive meteorites

    NASA Astrophysics Data System (ADS)

    Martins, Zita

    Carbonaceous meteorites are primitive samples that provide crucial information about the solar system genesis and evolution. This class of meteorites has also a rich organic inventory, which may have contributed the first prebiotic building blocks of life to the early Earth. We have studied the soluble organic inventory of several CR and CM meteorites, using high performance liquid chromatography with UV fluorescence detection (HPLC-FD), gas chromatography-mass spectrometry (GC-MS) and gas chromatography-combustion-isotope ratio mass spectrometry (GC-C-IRMS). Our target organic molecules include amino acids, nucleobases and polycyclic aromatic hydrocarbons (PAHs), among others. CR chondrites contain the highest amino acids concentration ever detected in a meteorite. The degree of aqueous alteration amongst this class of meteorites seems to be responsible for the amino acid distribution. Pioneering compound-specific carbon isotope measurements of nucleobases present in carbonaceous chondrites show that these compounds have a non-terrestrial origin. This suggests that components of the ge-netic code may have had a crucial role in life's origin. Investigating the abundances, distribution and isotopic composition of organic molecules in primitive meteorites significantly improves our knowledge of the chemistry of the early solar system, and the resources available for the first living organisms on Earth.

  6. Generating Complex Movements of Humanoid Robots by Using Primitives

    NASA Astrophysics Data System (ADS)

    Vukobratović, Miomir; Borovac, Branislav; Raković, Mirko; Nikolić, Milutin

    The objective of this work is to demonstrate the possibility of using primitives to generate complex movements that ensure motion of bipedal humanoid robots. Primitives represent simple movements that are either reflex or learned. Each primitive has its parameters and constraints that are determined on the basis of the movements capable of performing by a human. The set of all primitives represents the base from which primitives are selected and combined for the purpose of performing the corresponding complex movement. The proof that a correct selection of primitives is made and that the movement is the appropriate one is obtained on the basis of the maintainance of dynamic balance, which is realized by monitoring the ZMP position, as well as based on the pattern of the very movement.

  7. Outcomes of Adolescent and Adult Patients with Lung Metastatic Osteosarcoma and Comparison of Synchronous and Metachronous Lung Metastatic Groups

    PubMed Central

    Gok Durnali, Ayse; Paksoy Turkoz, Fatma; Ardic Yukruk, Fisun; Tokluoglu, Saadet; Yazici, Omer Kamil; Demirci, Ayse; Bal, Oznur; Gundogdu Buyukbas, Selay; Esbah, Onur; Oksuzoglu, Berna; Alkis, Necati

    2016-01-01

    Osteosarcomas with lung metastases are rather heterogenous group. We aimed to evaluate the clinicopathological characteristics and outcomes of osteosarcoma patients with lung metastases and to compare the synchronous and metachronous lung metastatic groups. A total of 93 adolescent and adult patients with lung metastatic osteosarcoma, from March 1995 to July 2011, in a single center, were included. Sixty-five patients (69.9%) were male. The median age was 19 years (range, 14–74). Thirty-nine patients (41.9%) had synchronous lung metastases (Group A) and 54 patients (58.1%) had metachronous lung metastases (Group B). The 5-year and 10-year post-lung metastases overall survival (PLM-OS) was 17% and 15%, respectively. In multivariate analysis for PLM-OS, time to lung metastases (p = 0.010), number of metastatic pulmonary nodules (p = 0.020), presence of pulmonary metastasectomy (p = 0.007) and presence of chemotherapy for lung metastases (p< 0.001) were found to be independent prognostic factors. The median PLM-OS of Group A and Group B was 16 months and 9 months, respectively. In Group B, the median PLM-OS of the patients who developed lung metastases within 12 months was 6 months, whereas that of the patients who developed lung metastases later was 16 months. Time to lung metastases, number and laterality of metastatic pulmonary nodules, chemotherapy for lung metastatic disease and pulmonary metastasectomy were independent prognostic factors for patients with lung metastatic osteosarcoma. The best PLM-OS was in the subgroup of patients treated both surgery and chemotherapy. The prognosis of the patients who developed lung metastases within 12 months after diagnosis was worst. PMID:27167624

  8. Elemental Composition of Primitive Anhydrous IDPs

    NASA Astrophysics Data System (ADS)

    Flynn, G.; Wirick, S.; Sutton, S. R.; Lanzirotti, A.

    2015-10-01

    We measured elemental compositions of five large anhydrous cluster interplanetary dust particles (IDPs) that show no evidence of significant thermal alteration during atmospheric entry and found their mean composition to be very similar to that of primitive CI meteorites. Our results indicate that the enrichment in moderately volatile elements and the depletion in S found in the ~10 μm anhydrous, chondritic porous (CP) IDPs, the matrix of these cluster IDPs, are not representative of the composition of their parent body. The inclusion of larger (>10 μm) volatile-poor silicates as well as sulfides in the large anhydrous cluster IDPs, which sample the CP IDP parent body at a larger size scale, suggests the large cluster IDPs are unbiased samples of the condensable material of the Solar Nebula.

  9. Persistent primitive trigeminal artery: a review.

    PubMed

    Azab, Waleed; Delashaw, Johnny; Mohammed, Mohammed

    2012-01-01

    The trigeminal artery is the largest of the fetal carotid-basilar anastomotic arteries, and it persists for the longest embryonic period. The artery usually involutes after the development of the posterior communicating artery. The exact causes of persistence of this primitive vessel into adulthood are not completely clear. Angiographic and anatomical descriptions of the various persistent trigeminal artery (PTA) configurations and their relation to the remainder of the cerebrovascular tree and the other surrounding structures have been reported. Persistent trigeminal artery can be associated with many other vascular anomalies and disorders including aneurysms, arteriovenous malformations and carotid-cavernous fistulae. A thorough understanding of the anatomical and angiographic features of this persistent embryonic arterial channel is of utmost importance when making therapeutic decisions and embarking on surgical or endovascular intervention for any pertinent pathological condition. We review the embryology, angiographic features, microsurgical anatomy and associated vascular anomalies and disorders of the persistent trigeminal artery. PMID:22843453

  10. Giant impacts on a primitive Uranus

    NASA Technical Reports Server (NTRS)

    Slattery, Wayne L.; Benz, Willy; Cameron, A. G. W.

    1992-01-01

    Simulations of collisions are conducted between a model of the primitive Uranus and 1-3 earth-mass impactors, using smooth-particle hydrodynamics. A series of collisions was simulated for each impactor while varying the total angular momentum of the system. Most of the simulation runs left ices in orbit; a subset of the runs also left rock or iron (from the impactor). It is concluded on the basis of these results that there is a wide range of giant impacts which could have produced the current period and inclination of the spin axis relative to the plane of the ecliptic. A subset of these could have deposited the material in orbit from which the regular satellites of Uranus were assembled.

  11. Primitive defenses: cognitive aspects and therapeutic handling.

    PubMed

    Groh, L S

    In this paper the primitive defenses first described by Melanie Klein under the label of "schizoid mechanisms" are examined. The defenses considered are splitting the pathological uses of identification and projective identification, and the psychotic forms of denial. This examination is twofold: (1) the cognitive aspects of these defenses as described in terms of concepts developed by Jean Piaget; (2) concrete examples of the operation of these defenses during the treatment of schizophrenic patients are given and the effects of interventions based on the cognitive analysis are described. It is stressed that at times interventions, such as interpretation and confrontation, based on cognitive analysis, can temporarily and in some instances even permanently stop the operation of these defenses, allowing emotionally meaningful material to emerge which expedites the therapeutic process. PMID:7429737

  12. Primitive material surviving in chondrites - Matrix

    NASA Technical Reports Server (NTRS)

    Scott, E. R. D.; Barber, D. J.; Alexander, C. M.; Hutchinson, R.; Peck, J. A.

    1988-01-01

    A logical place to search for surviving pristine nebular material is in the fine-grained matrices of ordinary and carbonaceous chondrites of petrographic type 3. Unfortunately, many of these chondrites have experienced brecciation, thermal metamorphism, and aqueous alteration, so that interpreting individual features in terms of specific nebular conditions and/or processes is difficult. It follows that the origin and evolutionary history of such matrix phases are controversial, and a consensus is difficult to define. In this chapter, therefore, after summarizing the salient mineralogical, petrographic, chemical, and isotopic features of matrix in apparently primitive chondrites, an attempt is made to provide an overview both of areas of agreement and of topics that are currently in dispute.

  13. A manual for PARTI runtime primitives, revision 1

    NASA Technical Reports Server (NTRS)

    Das, Raja; Saltz, Joel; Berryman, Harry

    1991-01-01

    Primitives are presented that are designed to help users efficiently program irregular problems (e.g., unstructured mesh sweeps, sparse matrix codes, adaptive mesh partial differential equations solvers) on distributed memory machines. These primitives are also designed for use in compilers for distributed memory multiprocessors. Communications patterns are captured at runtime, and the appropriate send and receive messages are automatically generated.

  14. 36 CFR 261.21 - National Forest primitive areas.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 36 Parks, Forests, and Public Property 2 2013-07-01 2013-07-01 false National Forest primitive areas. 261.21 Section 261.21 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE PROHIBITIONS General Prohibitions § 261.21 National Forest primitive areas. The following...

  15. 36 CFR 261.21 - National Forest primitive areas.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 36 Parks, Forests, and Public Property 2 2012-07-01 2012-07-01 false National Forest primitive areas. 261.21 Section 261.21 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE PROHIBITIONS General Prohibitions § 261.21 National Forest primitive areas. The following...

  16. 36 CFR 261.21 - National Forest primitive areas.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 36 Parks, Forests, and Public Property 2 2011-07-01 2011-07-01 false National Forest primitive areas. 261.21 Section 261.21 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE PROHIBITIONS General Prohibitions § 261.21 National Forest primitive areas. The following...

  17. 36 CFR 261.21 - National Forest primitive areas.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 36 Parks, Forests, and Public Property 2 2014-07-01 2014-07-01 false National Forest primitive areas. 261.21 Section 261.21 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE PROHIBITIONS General Prohibitions § 261.21 National Forest primitive areas. The following...

  18. 36 CFR 261.21 - National Forest primitive areas.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false National Forest primitive areas. 261.21 Section 261.21 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE PROHIBITIONS General Prohibitions § 261.21 National Forest primitive areas. The following...

  19. Peruvoside, a Cardiac Glycoside, Induces Primitive Myeloid Leukemia Cell Death.

    PubMed

    Feng, Qian; Leong, Wa Seng; Liu, Liang; Chan, Wai-In

    2016-01-01

    Despite the available chemotherapy and treatment, leukemia remains a difficult disease to cure due to frequent relapses after treatment. Among the heterogeneous leukemic cells, a rare population referred as the leukemic stem cell (LSC), is thought to be responsible for relapses and drug resistance. Cardiac glycosides (CGs) have been used in treating heart failure despite its toxicity. Recently, increasing evidence has demonstrated its new usage as a potential anti-cancer drug. Ouabain, one of the CGs, specifically targeted CD34⁺CD38(-) leukemic stem-like cells, but not the more mature CD34⁺CD38⁺ leukemic cells, making this type of compounds a potential treatment for leukemia. In search of other potential anti-leukemia CGs, we found that Peruvoside, a less studied CG, is more effective than Ouabain and Digitoxin at inducing cell death in primitive myeloid leukemia cells without obvious cytotoxicity on normal blood cells. Similar to Ouabain and Digitoxin, Peruvoside also caused cell cycle arrest at G₂/M stage. It up-regulates CDKN1A expression and activated the cleavage of Caspase 3, 8 and PARP, resulting in apoptosis. Thus, Peruvoside showed potent anti-leukemia effect, which may serve as a new anti-leukemia agent in the future. PMID:27110755

  20. Chemical compositions of primitive solar system particles

    NASA Technical Reports Server (NTRS)

    Sutton, Steve R.; Bajt, S.

    1994-01-01

    Chemical studies of micrometeorites are of fundamental importance primarily because atmospheric entry selection effects (such as destruction of friable objects) are less significant than those for conventional meteorites. As a result, particles that have experienced very little postaccretional processing have a significant chance of surviving the Earth encounter and subsequent collection. Thus, chemical analyses of these relatively unaltered micrometeorites may lead to a better understanding of the compositions of the most primitive materials in the solar system and thereby constrain the conditions (physical and chemical) that existed in the early solar nebula. Micrometeorites have been collected from the stratosphere, polar ices, and ocean sediments, but the stratospheric collection is the best source for the most unaltered material because they are small and are not heated to their melting points. Despite the fact that the stratospheric micrometeorites have masses in the nanogram range, a variety of microanalytical techniques have been applied to bulk chemical analyses with part-per-million sensitivity. In some cases, multi-disciplinary studies (e.g., chemistry and mineralogy) have been performed on individual particles. The first-order conclusion is that the chondrite-like particles are chemically similar to carbonaceous chondrites but in detail are distinct from members of the conventional meteorite collection. The purpose of this paper is to provide an overview of the results to date and identify important areas for further study.

  1. Sperm Cells of a Primitive Strepsipteran.

    PubMed

    Nardi, James B; Delgado, Juan A; Collantes, Francisco; Miller, Lou Ann; Bee, Charles M; Kathirithamby, Jeyaraney

    2013-01-01

    The unusual life style of Strepsiptera has presented a long-standing puzzle in establishing its affinity to other insects. Although Strepsiptera share few structural similarities with other insect orders, all members of this order share a parasitic life style with members of two distinctive families in the Coleoptera-the order now considered the most closely related to Strepsiptera based on recent genomic evidence. Among the structural features of several strepsipteran families and other insect families that have been surveyed are the organization of testes and ultrastructure of sperm cells. For comparison with existing information on insect sperm structure, this manuscript presents a description of testes and sperm of a representative of the most primitive extant strepsipteran family Mengenillidae, Eoxenos laboulbenei. We compare sperm structure of E. laboulbenei from this family with that of the three other families of Strepsiptera in the other strepsipteran suborder Stylopidia that have been studied as well as with members of the beetle families Meloidae and Rhipiphoridae that share similar life histories with Strepsiptera. Meloids, Rhipiphorids and Strepsipterans all begin larval life as active and viviparous first instar larvae. This study examines global features of these insects' sperm cells along with specific ultrastructural features of their organelles. PMID:26462430

  2. Sperm Cells of a Primitive Strepsipteran

    PubMed Central

    Nardi, James B.; Delgado, Juan A.; Collantes, Francisco; Miller, Lou Ann; Bee, Charles M.; Kathirithamby, Jeyaraney

    2013-01-01

    The unusual life style of Strepsiptera has presented a long-standing puzzle in establishing its affinity to other insects. Although Strepsiptera share few structural similarities with other insect orders, all members of this order share a parasitic life style with members of two distinctive families in the Coleoptera—the order now considered the most closely related to Strepsiptera based on recent genomic evidence. Among the structural features of several strepsipteran families and other insect families that have been surveyed are the organization of testes and ultrastructure of sperm cells. For comparison with existing information on insect sperm structure, this manuscript presents a description of testes and sperm of a representative of the most primitive extant strepsipteran family Mengenillidae, Eoxenos laboulbenei. We compare sperm structure of E. laboulbenei from this family with that of the three other families of Strepsiptera in the other strepsipteran suborder Stylopidia that have been studied as well as with members of the beetle families Meloidae and Rhipiphoridae that share similar life histories with Strepsiptera. Meloids, Rhipiphorids and Strepsipterans all begin larval life as active and viviparous first instar larvae. This study examines global features of these insects’ sperm cells along with specific ultrastructural features of their organelles. PMID:26462430

  3. Renal Primitive Neuroectodermal Tumor: A Case Report.

    PubMed

    Yang, Cheng; Xu, Hanjiang; Zhou, Jun; Hao, Zongyao; Wang, Jianzhong; Lin, Changmin; Zhang, Li; Zhu, Xia; Liang, Chaozhao

    2015-12-01

    Primitive neuroectodermal tumor (PNET) is a malignant small round cell tumor and typically arises from bone or soft tissue in adolescents and young adults. Renal PNET is extraordinarily rare and exhibits highly aggressive biological behavior with poor prognosis.We present here a new case of renal PNET in a 31-year-old female. The patients were referred to our hospital because of left flank pain with nausea and vomiting for 1 week. A computed tomography scan revealed a 14.7 × 12.7 cm well-defined, unevenly mass lesion with both solid and cystic components and the tumor was not enhanced uniformly.A preoperative diagnosis of cystic renal cell carcinoma and urinary tract infection was made. The patient undergone anti-inflammatory therapy followed by a left radical nephrectomy. Taken with morphological pattern and immunohistochemical markers, a diagnosis of renal PNET was made. Two cycles of combined chemotherapy were executed. At the 14-month follow-up, no evidence of metastasis or recurrence was indicated.This case reminds clinicians that for adolescents and young adults with a suspicious renal mass, a diagnosis of renal PNET should be always considered. An initial surgery followed by radiotherapy and chemotherapy is suggested for the therapeutic management. PMID:26656379

  4. Primary Multiple Pulmonary Primitive Neuroectodermal Tumor

    PubMed Central

    Dong, Ming; Liu, Jinghao; Song, Zuoqing; Li, Xin; Shi, Tao; Wang, Dan; Ren, Dian; Chen, Jun

    2015-01-01

    Abstract Primitive neuroectodermal tumors (PNETs) arising directly from the lung are extremely rare but particularly aggressive neoplasms. Although thoracic PNET usually develops on the chest wall, there have been reports of primary Ewing sarcoma/PNET of the lung. We present the case of a 16-year-old male with PNET diagnosed following histologic and immunohistochemical examination of a video-assisted thoracic surgical biopsy. As typically occurring for these tumors, the diagnosis was initially delayed in our patient and prognosis was poor despite aggressive surgical resection and postoperative chemotherapy. We attempted to explore the use of targeted pharmacotherapy through high-throughput sequencing in this case. We found that this treatment using Avastin and Cetuximab could provide a new therapeutic direction for PNET. PNENTs arising from the lung parenchyma without pleural or chest wall involvement are extremely rare. Although uncommon, if the pathological features are similar to Ewing sarcoma, PNENTs should be kept in mind, and the target therapy may be a potent treatment for this disease. PMID:26166119

  5. Learning of Action Through Adaptive Combination of Motor Primitives

    PubMed Central

    Thoroughman, Kurt A.; Shadmehr, Reza

    2008-01-01

    Understanding how the brain constructs movements remains a fundamental challenge in neuroscience. The brain may control complex movements through flexible combination of motor primitives1, where each primitive is an element of computation in the sensorimotor map that transforms desired limb trajectories into motor commands. Theoretical studies have shown that a system’s ability to learn actions depends on the shape of its primitives2. Using a time-series analysis of error patterns, here we find evidence that humans learn dynamics of reaching movements through flexible combination of primitives that have Gaussian-like tuning functions encoding hand velocity. The wide tuning of the inferred primitives predicts limitations on the brain’s ability to represent viscous dynamics. We find close agreement between the predicted limitations and subjects’ adaptation to novel force fields. The mathematical properties of the derived primitives resemble the tuning curves of Purkinje cells in the cerebellum. Activity of these cells may encode primitives that underlie learning of dynamics. PMID:11048720

  6. spib is required for primitive myeloid development in Xenopus.

    PubMed

    Costa, Ricardo M B; Soto, Ximena; Chen, Yaoyao; Zorn, Aaron M; Amaya, Enrique

    2008-09-15

    Vertebrate blood formation occurs in 2 spatially and temporally distinct waves, so-called primitive and definitive hematopoiesis. Although definitive hematopoiesis has been extensively studied, the development of primitive myeloid blood has received far less attention. In Xenopus, primitive myeloid cells originate in the anterior ventral blood islands, the equivalent of the mammalian yolk sac, and migrate out to colonize the embryo. Using fluorescence time-lapse video microscopy, we recorded the migratory behavior of primitive myeloid cells from their birth. We show that these cells are the first blood cells to differentiate in the embryo and that they are efficiently recruited to embryonic wounds, well before the establishment of a functional vasculature. Furthermore, we isolated spib, an ETS transcription factor, specifically expressed in primitive myeloid precursors. Using spib antisense morpholino knockdown experiments, we show that spib is required for myeloid specification, and, in its absence, primitive myeloid cells retain hemangioblast-like characteristics and fail to migrate. Thus, we conclude that spib sits at the top of the known genetic hierarchy that leads to the specification of primitive myeloid cells in amphibians. PMID:18594023

  7. Fundamental physical theories: Mathematical structures grounded on a primitive ontology

    NASA Astrophysics Data System (ADS)

    Allori, Valia

    In my dissertation I analyze the structure of fundamental physical theories. I start with an analysis of what an adequate primitive ontology is, discussing the measurement problem in quantum mechanics and theirs solutions. It is commonly said that these theories have little in common. I argue instead that the moral of the measurement problem is that the wave function cannot represent physical objects and a common structure between these solutions can be recognized: each of them is about a clear three-dimensional primitive ontology that evolves according to a law determined by the wave function. The primitive ontology is what matter is made of while the wave function tells the matter how to move. One might think that what is important in the notion of primitive ontology is their three-dimensionality. If so, in a theory like classical electrodynamics electromagnetic fields would be part of the primitive ontology. I argue that, reflecting on what the purpose of a fundamental physical theory is, namely to explain the behavior of objects in three-dimensional space, one can recognize that a fundamental physical theory has a particular architecture. If so, electromagnetic fields play a different role in the theory than the particles and therefore should be considered, like the wave function, as part of the law. Therefore, we can characterize the general structure of a fundamental physical theory as a mathematical structure grounded on a primitive ontology. I explore this idea to better understand theories like classical mechanics and relativity, emphasizing that primitive ontology is crucial in the process of building new theories, being fundamental in identifying the symmetries. Finally, I analyze what it means to explain the word around us in terms of the notion of primitive ontology in the case of regularities of statistical character. Here is where the notion of typicality comes into play: we have explained a phenomenon if the typical histories of the primitive

  8. Persistent Primitive Trigeminal Artery: An Unusual Cause of Vascular Tinnitus

    PubMed Central

    Arora, Arundeep; Jana, Manisha

    2013-01-01

    Pulsatile tinnitus is generally of vascular origin and can be due to arterial, venous, or systemic causes. While certain congenital anatomical variants and arterial vascular loops have been commonly found in symptomatic patients undergoing imaging, persistent primitive trigeminal artery in association with isolated tinnitus is unusual. Thus we report a patient with unilateral isolated pulsatile tinnitus who was evaluated with magnetic resonance angiography and was found to have a persistent primitive trigeminal artery. We also briefly discuss vascular tinnitus as well as the embryology, imaging, and classification of persistent primitive trigeminal artery with the clinical implications. PMID:24459596

  9. Persistent primitive trigeminal artery: an unusual cause of vascular tinnitus.

    PubMed

    Panda, Ananya; Arora, Arundeep; Jana, Manisha

    2013-01-01

    Pulsatile tinnitus is generally of vascular origin and can be due to arterial, venous, or systemic causes. While certain congenital anatomical variants and arterial vascular loops have been commonly found in symptomatic patients undergoing imaging, persistent primitive trigeminal artery in association with isolated tinnitus is unusual. Thus we report a patient with unilateral isolated pulsatile tinnitus who was evaluated with magnetic resonance angiography and was found to have a persistent primitive trigeminal artery. We also briefly discuss vascular tinnitus as well as the embryology, imaging, and classification of persistent primitive trigeminal artery with the clinical implications. PMID:24459596

  10. Ideals and primitive elements of some relatively free Lie algebras.

    PubMed

    Ekici, Naime; Esmerligil, Zerrin; Ersalan, Dilek

    2016-01-01

    Let F be a free Lie algebra of finite rank over a field K. We prove that if an ideal [Formula: see text] of the algebra [Formula: see text] contains a primitive element [Formula: see text] then the element [Formula: see text] is primitive. We also show that, in the Lie algebra [Formula: see text] there exists an element [Formula: see text] such that the ideal [Formula: see text] contains a primitive element [Formula: see text] but, [Formula: see text] and [Formula: see text] are not conjugate by means of an inner automorphism. PMID:27386282

  11. [Secondary retroperitoneal fibrosis in a 39-year-old man after rectal cancer].

    PubMed

    Jarosch, A; Tiller, M; Rohrbach, H; Leimbach, T; Schepp, W

    2016-05-01

    A 39-year-old man had been treated for rectal cancer 6 years ago by lower anterior resection of the rectum and perioperative radiochemotherapy. Since then follow-up had been unremarkable but now the patient presented with unspecific lower abdominal pain. The cause of the pain was identified as paraneoplastic retroperitoneal fibrosis secondary to metachronous pulmonary metastases of the rectal cancer. PMID:26895316

  12. The Artist/Craftsman/Teacher: And Primitive Pottery.

    ERIC Educational Resources Information Center

    Verbalaitis, Victor

    1978-01-01

    In two related articles, the author describes (1) a field trip during which his high school ceramics club collected clay from the outdoors and (2) the process he used to create primitive pottery pieces from such material. (SJL)

  13. A Mathematical Model for the Flow of a Casson Fluid due to Metachronal Beating of Cilia in a Tube

    PubMed Central

    Siddiqui, A. M.; Farooq, A. A.; Rana, M. A.

    2015-01-01

    A mathematical model is developed to study the transport mechanism of a Casson fluid flow inspired by the metachronal coordination between the beating cilia in a cylindrical tube. A two-dimensional system of nonlinear equations governing the flow problem is formulated by using axisymmetric cylindrical coordinates and then simplified by employing the long wavelength and low Reynolds number assumptions. Exact solutions are derived for the velocity components, the axial pressure gradient, and the stream function. However, the expressions for the pressure rise and the volume flow rate are evaluated numerically. The features of the flow characteristics such as pumping and trapping are illustrated and discussed with the help of graphs. It is observed that the volume flow rate is influenced significantly by the width of plug flow region Hp as well as the cilia length parameter ε. The analysis is also applied and compared with the estimated value of the volume flow rate of epididymal fluid in the ductus efferentes of the human male reproductive tract. PMID:25789334

  14. Childhood primary angiitis of the central nervous system with metachronous hemorrhagic infarcts: a postmortem study with clinicopathologic correlation.

    PubMed

    Katsetos, Christos D; Poletto, Erica; Kasmire, Kathryn E; Walleigh, Diana; Kumar, Indira; Pascasio, Judy Mae; Legido, Agustin; Goldsmith, Donald P

    2014-06-01

    This neuropathologic case study illustrates the discovery of metachronous hemorrhagic infarcts insinuating round mass-like lesions by magnetic resonance imaging in the setting of childhood primary angiitis of the central nervous system (cPACNS) raising diagnostic awareness of this unusual presentation in a clinical and neuroimaging context. The report underscores the importance of recurrent vasculitis-induced ischemic brain damage as a pathologic correlate of relapsing cPACNS and offers a critical reappraisal of common imitators as well as a clinicopathologic approach to differential diagnosis. Attention is drawn to the caveat that although magnetic resonance imaging findings at initial presentation may not be typical for stroke, they later exhibit attributes of cerebral infarction at both the subacute and chronic stages. A pattern of cPACNS characterized predominantly by multiple petechial-like cortical hemorrhages with pathologic features of hemorrhagic infarcts is recognized. The present study lends credence to the practice of a rigorous autopsy-based approach aimed at a better understanding of the anatomic pathology and biology of cPACNS and at facilitating prospective neuroimaging and biopsy-based surgical pathology correlations, ultimately enhancing diagnostic accuracy in clinical settings. Although PACNS is, by definition, a diagnosis of exclusion, it should be considered from the outset in the differential diagnosis of ischemic stroke or hemorrhagic stroke or of unusual and relapsing intra-axial mass-like CNS lesions in children, necessitating appropriate pathologic evaluation of brain biopsy specimens. PMID:25149960

  15. Curative resection for leiomyosarcoma of the descending mesocolon with metachronous liver metastasis: A case report and literature review

    PubMed Central

    KATO, TAKAHARU; NODA, HIROSHI; ABE, IKU; ALONSO, SERGIO; YOKOYAMA, NOBU; RIKIYAMA, TOSHIKI

    2016-01-01

    Mesenteric leiomyosarcoma is a rare disease with poor prognosis. Previously, mesenteric leiomyosarcoma was not differentiated from gastrointestinal stromal tumor (GIST), which is the most common mesenchymal tumor of the gastrointestinal tract, and several cases of GIST may have been misclassified as mesenteric leiomyosarcoma. Thus, the actual clinicopathological characteristics of mesenteric leiomyosarcomas remain unclear. We herein describe a case of leiomyosarcoma arising in the descending mesocolon in a patient who developed metachronous liver metastasis. A 76-year-old woman reported a mass in her left upper abdomen. Computed tomography imaging revealed a low-density tumor adjacent to the descending colon. The patient underwent surgery and the tumor was resected along with part of the descending colon. Immunohistochemical differential diagnosis revealed that the tumor was positive for smooth muscle actin and desmin, and negative for CD117 (c-KIT) and S-100, which are characteristic of gastrointestinal leiomyosarcoma. A single liver metastasis developed 24 months after the operation. The patient underwent curative resection of the metastatic lesion. Sixteen months following surgery for the liver metastasis and 40 months after the initial removal of the primary lesion, the patient remains disease-free. The prognosis of leiomyosarcoma remains poor and standardized chemotherapy for this rare disease has not yet been established. Early diagnosis and surgical removal of the tumor is the only potentially curative option for liver metastasis of mesenteric leiomyosarcoma. PMID:27330765

  16. A mathematical model for the flow of a Casson fluid due to metachronal beating of cilia in a tube.

    PubMed

    Siddiqui, A M; Farooq, A A; Rana, M A

    2015-01-01

    A mathematical model is developed to study the transport mechanism of a Casson fluid flow inspired by the metachronal coordination between the beating cilia in a cylindrical tube. A two-dimensional system of nonlinear equations governing the flow problem is formulated by using axisymmetric cylindrical coordinates and then simplified by employing the long wavelength and low Reynolds number assumptions. Exact solutions are derived for the velocity components, the axial pressure gradient, and the stream function. However, the expressions for the pressure rise and the volume flow rate are evaluated numerically. The features of the flow characteristics such as pumping and trapping are illustrated and discussed with the help of graphs. It is observed that the volume flow rate is influenced significantly by the width of plug flow region H p as well as the cilia length parameter ε. The analysis is also applied and compared with the estimated value of the volume flow rate of epididymal fluid in the ductus efferentes of the human male reproductive tract. PMID:25789334

  17. A comment on methanogenic bacteria and the primitive ecology

    NASA Technical Reports Server (NTRS)

    Woese, C. R.

    1977-01-01

    As the phenotype of methanogenic bacteria is suggested to have been one of the major factors creating a dynamic balance between CO2 and CH4 in the primitive atmosphere, these organisms are thought to be very ancient. Their antiquity may be further postulated by comparative characterization of their ribosomal RNA. Accepting this antiquity, it is concluded that a carbon-dioxide-methane cycle, driven by photosynthesis, was the major carbon cycle in primitive ecology, and that photosynthesis and methanogens were thus contemporaneous.

  18. Aggressive surgical resection for concomitant liver and lung metastasis in colorectal cancer

    PubMed Central

    Lee, Sung Hwan; Kim, Sung Hyun; Lim, Jin Hong; Kim, Sung Hoon; Lee, Jin Gu; Kim, Dae Joon; Choi, Gi Hong; Choi, Jin Sub

    2016-01-01

    Backgrounds/Aims Aggressive surgical resection for hepatic metastasis is validated, however, concomitant liver and lung metastasis in colorectal cancer patients is equivocal. Methods Clinicopathologic data from January 2008 through December 2012 were retrospectively reviewed in 234 patients with colorectal cancer with concomitant liver and lung metastasis. Clinicopathologic factors and survival data were analyzed. Results Of the 234 patients, 129 (55.1%) had synchronous concomitant liver and lung metastasis from colorectal cancer and 36 (15.4%) had metachronous metastasis. Surgical resection was performed in 33 patients (25.6%) with synchronous and 6 (16.7%) with metachronous metastasis. Surgical resection showed better overall survival in both groups (synchronous, p=0.001; metachronous, p=0.028). In the synchronous metastatic group, complete resection of both liver and lung metastatic lesions had better survival outcomes than incomplete resection of two metastatic lesions (p=0.037). The primary site of colorectal cancer and complete resection were significant prognostic factors (p=0.06 and p=0.003, respectively). Conclusions Surgical resection for hepatic and pulmonary metastasis in colorectal cancer can improve complete remission and survival rate in resectable cases. Colorectal cancer with concomitant liver and lung metastasis is not a poor prognostic factor or a contraindication for surgical treatments, hence, an aggressive surgical approach may be recommended in well-selected resectable cases. PMID:27621747

  19. A Primitive-Based 3D Object Recognition System

    NASA Astrophysics Data System (ADS)

    Dhawan, Atam P.

    1988-08-01

    A knowledge-based 3D object recognition system has been developed. The system uses the hierarchical structural, geometrical and relational knowledge in matching the 3D object models to the image data through pre-defined primitives. The primitives, we have selected, to begin with, are 3D boxes, cylinders, and spheres. These primitives as viewed from different angles covering complete 3D rotation range are stored in a "Primitive-Viewing Knowledge-Base" in form of hierarchical structural and relational graphs. The knowledge-based system then hypothesizes about the viewing angle and decomposes the segmented image data into valid primitives. A rough 3D structural and relational description is made on the basis of recognized 3D primitives. This description is now used in the detailed high-level frame-based structural and relational matching. The system has several expert and knowledge-based systems working in both stand-alone and cooperative modes to provide multi-level processing. This multi-level processing utilizes both bottom-up (data-driven) and top-down (model-driven) approaches in order to acquire sufficient knowledge to accept or reject any hypothesis for matching or recognizing the objects in the given image.

  20. Cancer

    MedlinePlus

    ... Leukemia Liver cancer Non-Hodgkin lymphoma Ovarian cancer Pancreatic cancer Testicular cancer Thyroid cancer Uterine cancer ... have any symptoms. In certain cancers, such as pancreatic cancer, symptoms often do not start until the disease ...

  1. Comet Dust: The Diversity of "Primitive" Particles and Implications

    NASA Technical Reports Server (NTRS)

    Wooden, Diane H.; Ishii, Hope A.; Bradley, John P.; Zolensky, Michael E.

    2016-01-01

    Comet dust is primitive and shows significant diversity. Our knowledge of the properties of primitive particles has expanded significantly through microscale investigations of cosmic dust samples ( IDP's(Interplanetary Dust Particles) and AMM's (Antarctic Micrometeorites)) and of comet dust samples (Stardust and Rosetta's COSIMA), as well as through remote sensing (spectroscopy and imaging) via Spitzer and via spacecraft encounters with 103P/Hartley 2 and 67P/Churyumov-Gerasimenko. Microscale investigations show that comet dust and cosmic dust are particles of unequilibrated materials, including aggregates of materials unequilibrated at submicron scales. We call unequilibrated materials "primitive" and we deduce they were incorporated into ice-rich (H2O-, CO2-, and CO-ice) parent bodies that remained cold, i.e., into comets, because of the lack of aqueous or thermal alteration since particle aggregation; yet some Stardust olivines suggest mild thermal metamorphism. Primitive particles exhibit a diverse range of: structure and typology; size and size distribution of constituents; concentration and form of carbonaceous and organic matter; D-, N-, and O- isotopic enhancements over solar; Mg-, Fe-contents of the silicate minerals; the compositions and concentrations of sulfides, and of less abundant mineral species such as chondrules, CAIs and carbonates. The uniformity within a group of samples points to: aerodynamic sorting of particles and/or particle constituents; the inclusion of a limited range of oxygen fugacities; the inclusion or exclusion of chondrules; a selection of organics. The properties of primitive particles imply there were disk processes that resulted in different comets having particular selections of primitive materials. The diversity of primitive particles has implications for the diversity of materials in the protoplanetary disk present at the time and in the region where the comets formed.

  2. Nonaffine chain and primitive path deformation in crosslinked polymers

    NASA Astrophysics Data System (ADS)

    Davidson, J. D.; Goulbourne, N. C.

    2016-08-01

    Chains in a polymer network deform nonaffinely at small length scales due to the ability for extensive microscopic rearrangement. Classically, the conformations of an individual chain can be described solely by an end-to-end length. This picture neglects interchain interactions and therefore does not represent the behavior of a real polymer network. The primitive path concept provides the additional detail to represent interchain entanglements, and techniques have recently been developed to identify the network of primitive paths in a polymer simulation. We use coarse-grained molecular dynamics (MD) to track both chain end-to-end and primitive path deformation in crosslinked polymer networks. The range of simulated materials includes short chain unentangled networks to long, entangled chain networks. Both chain end-to-end and primitive path length are found to be linear functions of the applied deformation, and a simple relationship describes the behavior of a network in response to large stretch uniaxial, pure shear, and equi-biaxial deformations. As expected, end-to-end chain length deformation is nonaffine for short chain networks, and becomes closer to affine for networks of long, entangled chains. However, primitive path deformation is found to always be nonaffine, even for long, entangled chains. We demonstrate how the microscopic constraints of crosslinks and entanglements affect nonaffine chain deformation as well as the simulated elastic behavior of the different networks.

  3. Spontaneous Regression of Primitive Merkel Cell Carcinoma

    PubMed Central

    2015-01-01

    Merkel cell carcinoma (MCC) is a rare, aggressive skin tumor that mainly occurs in the elderly with a generally poor prognosis. Like all skin cancers, its incidence is rising. Despite the poor prognosis, a few reports of spontaneous regression have been published. We describe the case of a 89-year-old male patient who presented two MCC lesions of the scalp. Following biopsy the lesions underwent complete regression with no clinical evidence of residual tumor up to 24 months. The current knowledge of MCC and the other cases of spontaneous regression described in the literature are reviewed. PMID:26788270

  4. Endoscopic surveillance of gastric cancers after Helicobacter pylori eradication.

    PubMed

    Kobayashi, Masaaki; Sato, Yuichi; Terai, Shuji

    2015-10-01

    The incidence and mortality of gastric cancer remains high in East Asian countries. Current data suggest that Helicobacter pylori (H. pylori) eradication might be more effective for preventing gastric cancer in young people before they develop atrophic gastritis and intestinal metaplasia. However, the long-term effect of H. pylori eradication on metachronous cancer prevention after endoscopic resection (ER) of early gastric cancer remains controversial, with some discordance between results published for Japanese and Korean studies. The detection ability of synchronous lesions before ER and eradication of H. pylori directly influences these results. After eradication, some gastric cancers are more difficult to diagnose by endoscopy because of morphologic changes that lead to a flat or depressed appearance. Narrow-band imaging with magnifying endoscopy (NBI-ME) is expected to be useful for identifying metachronous cancers. However, some gastric cancers after eradication show a "gastritis-like" appearance under NBI-ME. The gastritis-like appearance correlates with the histological surface differentiation of the cancer tubules and superficial non-neoplastic epithelium atop or interspersed with the cancer. Till date, it remains unclear whether H. pylori eradication could prevent progression of gastric cancer. Until we can establish more useful endoscopic examination methodologies, regular endoscopic surveillance of high-risk groups is expected to be the most beneficial approach for detection. PMID:26457015

  5. Endoscopic surveillance of gastric cancers after Helicobacter pylori eradication

    PubMed Central

    Kobayashi, Masaaki; Sato, Yuichi; Terai, Shuji

    2015-01-01

    The incidence and mortality of gastric cancer remains high in East Asian countries. Current data suggest that Helicobacter pylori (H. pylori) eradication might be more effective for preventing gastric cancer in young people before they develop atrophic gastritis and intestinal metaplasia. However, the long-term effect of H. pylori eradication on metachronous cancer prevention after endoscopic resection (ER) of early gastric cancer remains controversial, with some discordance between results published for Japanese and Korean studies. The detection ability of synchronous lesions before ER and eradication of H. pylori directly influences these results. After eradication, some gastric cancers are more difficult to diagnose by endoscopy because of morphologic changes that lead to a flat or depressed appearance. Narrow-band imaging with magnifying endoscopy (NBI-ME) is expected to be useful for identifying metachronous cancers. However, some gastric cancers after eradication show a “gastritis-like” appearance under NBI-ME. The gastritis-like appearance correlates with the histological surface differentiation of the cancer tubules and superficial non-neoplastic epithelium atop or interspersed with the cancer. Till date, it remains unclear whether H. pylori eradication could prevent progression of gastric cancer. Until we can establish more useful endoscopic examination methodologies, regular endoscopic surveillance of high-risk groups is expected to be the most beneficial approach for detection. PMID:26457015

  6. Paraneoplastic encephalomyelitis: Is it an oropharyngeal or a lung cancer complication?

    PubMed Central

    MOYANO, MARÍA SERENO; GUTIÉRREZ-GUTIÉRREZ, GERARDO; GÓMEZ-RAPOSO, CÉSAR; GÓMEZ, MIRIAM LÓPEZ; OJEDA, JOAQUÍN; MIRALLES, AMBROSIO; CASADO-SÁENZ, ENRIQUE

    2011-01-01

    This case report describes a patient with a locally advanced oropharyngeal cancer with a simultaneous paraneoplastic encephalomyelitis. To the best of our knowledge, a paraneoplastic neurological syndrome is a rare complication in head and neck cancer, and has previously not been reported in the literature. One year later, following initial treatment, a small cell lung cancer developed, a tumor frequently associated with this type of paraneoplastic syndrome. The dilemma, therefore, is whether this paraneoplastic symdrome was a secondary complication of the tonsilar concurrent cancer or a metachronous paraneoplastic syndrome prior to small cell lung cancer. PMID:22870148

  7. Clay minerals in primitive meteorites and interplanetary dust 1

    NASA Technical Reports Server (NTRS)

    Zolensky, M. E.; Keller, L. P.

    1991-01-01

    Many meteorites and interplanetary dust particles (IDPs) with primitive compositions contain significant amounts of phyllosilicate minerals, which are generally interpreted as evidence of protoplanetary aqueous alteration at an early period of the solar system. These meteorites are chondrites (near solar composition) of the carbonaceous and ordinary varieties. The former are subdivided (according to bulk composition and petrology) into CI, CM, CV, CO, CR, and ungrouped classes. IDPs are extraterrestrial particulates, collected in stratosphere, which have chemical compositions indicative of a primitive origin; they are typically distinct from the primitive meteorites. Characterization of phyllosilicates in these materials is a high priority because of the important physico-chemical information they hold. The most common phyllosilicates present in chondritic extraterrestrial materials are serpentine-group minerals, smectites, and micas. We discuss these phyllosilicates and describe the interpretation of their occurrence in meteorites and IDPs and what this indicates about history of their parent bodies, which are probably the hydrous asteroids.

  8. Polycyclic aromatic hydrocarbons - Primitive pigment systems in the prebiotic environment

    NASA Technical Reports Server (NTRS)

    Deamer, D. W.

    1992-01-01

    The chemical evolution of meteoritic organics in the primitive earth is examined experimentally with attention given to the photochemical effects of hydrocarbon/water mixtures. Also addressed are the generation of amphiphilic products by photochemical reactions and the transduction of light energy into potentially useful forms. Polycyclic aromatic hydrocarbons (PAHs) absorb light and exist in carbonaceous chondrites; PAHs are therefore examined as primitive pigments by means of salt solutions with pyrene, fluoranthene, and pyrene derivatives with hexadecane. The hexadecane undergoes photochemical oxidation and yields long-chain amphiphiles with oxygen supplied by water, and acid pH shifts also occur. PAHs are also tested in lipid bilayer membranes to examine light-energy transduction. Protons are found to accumulate within the membrane-bounded volume to form proton gradients, and this reaction is theorized to be a good model of primitive photochemical reactions that related to the transduction of light energy into useable forms.

  9. Insights to primitive replication derived from structures of small oligonucleotides

    NASA Technical Reports Server (NTRS)

    Smith, G. K.; Fox, G. E.

    1995-01-01

    Available information on the structure of small oligonucleotides is surveyed. It is observed that even small oligomers typically exhibit defined structures over a wide range of pH and temperature. These structures rely on a plethora of non-standard base-base interactions in addition to the traditional Watson-Crick pairings. Stable duplexes, though typically antiparallel, can be parallel or staggered and perfect complementarity is not essential. These results imply that primitive template directed reactions do not require high fidelity. Hence, the extensive use of Watson-Crick complementarity in genes rather than being a direct consequence of the primitive condensation process, may instead reflect subsequent selection based on the advantage of accuracy in maintaining the primitive genetic machinery once it arose.

  10. Brachinites: A New Primitive Achondrite Group

    NASA Astrophysics Data System (ADS)

    Nehru, C. E.; Prinz, M.; Weisberg, M. K.; Ebihara, M.; Clayton, R. N.; Mayeda, T. K.

    1992-07-01

    distinct primitive achondrite (near-chondritic compositions, achondritic textures) group that is highly oxidized (equivalent to L group). (3) Brachinites (BRA) evolved from chondritic material as did the reduced (intermediate between H and E groups) IAB-winonaites (IAB-WIN) and acapulcoites (ACA). (4) They all experienced some melting (plag depletion) and recrystallization to type 6 or 7 grade. Brachinite equilibration temperatures (using three thermometers) are in the 1000-1050 degree C range. (5) The compositions and abundances of ol, opx, and metal in the IAB-WIN, ACA, and BRA groups indicates that they experienced different amounts of oxidation of metallic Fe during heating, probably promoted by an aqueous vapor derived from accreted ices. This sequence is analogous to that proposed for oxidation of ordinary chondrites [8]. (6) The high ol/opx ratio and Fe-rich mineralogy of brachinites is a result of the reaction MgSiO3 + Fe^o + 1/2 O2 --> (Mg,Fe)2 SiO4, which converted chondritic silicates to highly oxidized ol-rich rocks. References: [1] Nehru, C.E. et al. (1983) Proc. 14th LPSC, Pt. 1, JGR 88, B237-B244. [2] Prinz, M. et al. (1986) LPSC XVII, 679-680. [3] Warren, P.H. and Kallemeyn, G.W. (1989) Proc. 19th LPSC, 475-486. [4] Kring, D.A. et al. (1991) Meteoritics 26, 360. [5] Kring, D.A. and Boynton, W.V. (1992) LPSC XXIII, 727-728. [6] Mason, B. (1991) Ant. Met. News. 14, No. 2, 22. [7] Ott, U. et al. (1985) Meteoritics 20, 69-78. [8] McSween, H.Y. and Labotka, T.C. (1992) GCA, in press.

  11. Primary spinal primitive neuroectodermal tumor on MR imaging.

    PubMed

    Thoriya, Prashant J; Watal, Pankaj; Bahri, Nandini U; Rathod, Ketan

    2015-01-01

    Neoplasms in the region of filum terminale are not uncommon. Myxopapillary ependymoma is the commonest tumor at this location. The differentials reported for this entity are nerve sheath tumor, meningioma, paraganglioma, intradural metastases, lymphoma, other varieties of ependymoma, subependymoma, astrocytoma, ganglioglioma, hemangioblastoma, and primitive neuroectodermal tumor (PNET). PNET may very rarely present as an intradural thoracolumbar mass. We present pre- and post-therapy magnetic resonance imaging (MRI) features of a patient with proven primary spinal primitive neuroectodermal tumor (PSPNET) of peripheral subtype. PMID:26752826

  12. Primary spinal primitive neuroectodermal tumor on MR imaging

    PubMed Central

    Thoriya, Prashant J; Watal, Pankaj; Bahri, Nandini U; Rathod, Ketan

    2015-01-01

    Neoplasms in the region of filum terminale are not uncommon. Myxopapillary ependymoma is the commonest tumor at this location. The differentials reported for this entity are nerve sheath tumor, meningioma, paraganglioma, intradural metastases, lymphoma, other varieties of ependymoma, subependymoma, astrocytoma, ganglioglioma, hemangioblastoma, and primitive neuroectodermal tumor (PNET). PNET may very rarely present as an intradural thoracolumbar mass. We present pre- and post-therapy magnetic resonance imaging (MRI) features of a patient with proven primary spinal primitive neuroectodermal tumor (PSPNET) of peripheral subtype. PMID:26752826

  13. Design of Quasi-Terminator Orbits near Primitive Bodies

    NASA Technical Reports Server (NTRS)

    Lantoine, Gregory; Broschart, Stephen B.; Grebow, Daniel J.

    2013-01-01

    Quasi-terminator orbits are a class of quasi-periodic orbits around a primitive body that exist in the vicinity of the well-known terminator orbits. The inherent stability of quasi-terminator trajectories and their wide variety of viewing geometries make them a very compelling option for primitive body mapping missions. In this paper, we discuss orbit design methodologies for selection of an appropriate quasi-terminator orbit that would meet the needs of a specific mission. Convergence of these orbits in an eccentric, higher-fidelity model is also discussed with an example case at Bennu, the target of the upcoming NASA's OSIRIS-REx mission.

  14. Supratentorial primitive neuroectodermal tumor during pregnancy. Case report.

    PubMed

    Ulivieri, S; Oliveri, G; Filosomi, F; Petraglia, F

    2007-04-01

    The case of an 18-year-old primipara in the second trimester of pregnancy affected by a primitive supratentorial mass is described. Main symptoms of increased intracranial pressure were severe headache, diplopia, and left hemiparesis. In the 20(th) week of pregnancy a fronto-temporal craniotomy was performed with complete excision of the tumor. Immunohistochemical analysis showed a primitive neuroectodermal tumor (PNET). Three months after being discharged, the patient still presented headache and apathy, and a magnetic resonance imaging scan again showed the presence of a temporal lesion; therefore, after caesarean delivery the second surgical resection of the tumor was performed. Combined chemotherapy and radiotherapy was required. PMID:17505462

  15. Interstellar chemistry recorded in organic matter from primitive meteorites.

    PubMed

    Busemann, Henner; Young, Andrea F; Alexander, Conel M O'd; Hoppe, Peter; Mukhopadhyay, Sujoy; Nittler, Larry R

    2006-05-01

    Organic matter in extraterrestrial materials has isotopic anomalies in hydrogen and nitrogen that suggest an origin in the presolar molecular cloud or perhaps in the protoplanetary disk. Interplanetary dust particles are generally regarded as the most primitive solar system matter available, in part because until recently they exhibited the most extreme isotope anomalies. However, we show that hydrogen and nitrogen isotopic compositions in carbonaceous chondrite organic matter reach and even exceed those found in interplanetary dust particles. Hence, both meteorites (originating from the asteroid belt) and interplanetary dust particles (possibly from comets) preserve primitive organics that were a component of the original building blocks of the solar system. PMID:16675696

  16. Therapeutic Outcome of Second Primary Malignancies in Patients with Well-Differentiated Thyroid Cancer

    PubMed Central

    Liou, Miaw-Jene; Tsang, Ngan-Ming; Hsueh, Chuen; Chao, Tzu-Chieh; Lin, Jen-Der

    2016-01-01

    Background. The aims of this study were to analyze the clinical characteristics of SPM in patients with well-differentiated thyroid cancer and to determine the long-term prognosis in patients with double malignancies. Materials and Methods. We retrospectively analyzed 2,864 patients with well-differentiated thyroid cancer and a mean age of 44.0 ± 14.4 years. Of these, 200 (7.0%) were diagnosed with SPM, 115 of which were diagnosed with metachronous SPM. Results. Of 2,864 patients, 163 (5.7%) patients died of thyroid cancer and 301 (10.5%) died of any cause by the end of the follow-up period. Multivariate analysis identified age, SPM, external radiotherapy, TNM stage, and postoperative serum Tg level to be factors independently associated with decreased survival. Of 200 patients with SPM, 74 (37.0%) died. In comparison to the anachronous and synchronous groups, the metachronous SPM group had a higher mean age; more advanced tumor, node, and metastasis stage; lower remission rate; higher postoperative radioactive iodide (131I) accumulated dose; a higher proportion of patients who underwent external radiotherapy; and higher thyroid cancer and total mortality rates. Conclusions. Patients with well-differentiated thyroid carcinoma and metachronous SPM had worse prognoses compared to patients without SPM. PMID:27118971

  17. [A Case of Rectal Neuroendocrine Carcinoma with Metachronous Liver Metastasis Treated with Multimodality Therapy].

    PubMed

    Miyamae, Yohei; Shimizu, Hisashi; Naganuma, Atsushi; Aiba, Masaaki; Tanaka, Toshiyuki; Ogawa, Tetsushi; Ogawa, Akira; Osamura, Yoshiyuki

    2016-08-01

    A 6 2-year-old woman visited our hospital with a complaint of anal bleeding and was diagnosed with rectal cancer. She underwent low anterior resection and D3 lymphadenectomy. The pathological diagnosis was shown as follows: Ra, Circ, type 2, por1, pSS, ly3, v1, pN2, pStage III b, and KRAS wild type. UFT/UZEL with polysaccharide K(PSK)was initiated as adjuvant chemotherapy after the operation. However, multiple liver metastases were found on CT after 3 courses of UFT/UZEL with PSK, and pathological reexamination revealed that the primary tumor was a neuroendocrine carcinoma. She underwent chemotherapy with CBDCA combined with CPT-11, but bone marrow suppression was observed after 4 courses of the treatment. As second-line chemotherapy, FOLFOX4 plus panitumumab(Pmab)was administered. Although the disease remained stable through 10 courses of FOLFOX4 plus Pmab, Grade 3 peripheral neuropathy was observed. Hence, FOLFIRI plus bevacizumab(Bmab)was administered as third-line chemotherapy. Twenty-eight courses of FOLFIRI plus Bmab were administered, and transcatheter arterial chemoembolization(TACE)was performed during chemotherapy. However, her general condition worsened after the therapies, and she died 2 years 3 months after the initial chemotherapy. PMID:27539046

  18. Altered p53 in microdissected, metachronous, premalignant and malignant oral lesions from the same patients

    PubMed Central

    Li, Y-Q; Pavelic, Z P; Wang, L-J; McDonald, J S; Gleich, L; Munck-Wikland, E; Dacic, S; Danilovic, Z; Pavelic, L J; Wilson, K M; Gluckman, J L; Stambrook, P J

    1995-01-01

    Aims—To determine whether mutant p53 alleles harboured by malignant tumours of the oral cavity were also present in previous premalignant lesions at the same site. Methods—Paraffin embedded tumour specimens along with their premalignant counterparts were analysed for p53 alterations using immunohistochemistry, microdissection, polymerase chain reaction amplification, and DNA sequencing. Results—Malignant lesions from five of eight patients showed overexpression of p53 protein by immunohistochemistry. Upon DNA sequencing, two of these five specimens had p53 mutations. Of the five patients whose cancers showed p53 overexpression by immunohistochemistry, three had previous premalignant lesions that also had immunohistochemically detectable p53 protein. However, DNA sequencing showed that none of these three had mutations in the p53 gene. The remaining five premalignant lesions had no immunohistochemically detectable p53 protein. Conclusions—Some premalignant lesions have increased p53 protein which can be detected by staining with antibody to p53. This staining is not caused by mutations in p53 that are found in subsequent tumours at the same site. Images PMID:16696020

  19. Differential diagnosis of lung lesion in breast carcinoma: a metachronous neoplasm or metastasis?

    PubMed

    Maddala, Raja Naga Mahesh; Udupa, Karthik; Thomas, Joseph; Pai, Kanthilatha

    2016-01-01

    A 34-year-old woman-a diagnosed case of pT1N1MO, stage IIa, estrogen and progesterone receptor positive (ER, PR) positive, Her2 negative carcinoma of the left breast-was managed with modified radical mastectomy and adjuvant chemotherapy. While planning for radiotherapy, she was found to have a well-defined enhancing lesion with spiculated margins in the superior segment of the right lower lobe along with a heterogeneously enhancing right hilar lymph node on CT. Histopathological evaluation of the lesion was suggestive of adenocarcinoma. The lesion was negative for ER, PR receptors, mammoglobin and gross cystic disease fluid protein. Thyroid transcription factor 1 (TTF-1) was positive, suggesting a primary lung adenocarcinoma rather than metastatic lesion from the breast. This case clearly signifies the importance of histopathological diagnosis of suspicious metastatic lesions in the setting of early breast cancer. We would also like to highlight the importance of TTF-1 in differentiating primary lung malignancy from metastasis. PMID:27170610

  20. Metachronous Occurrence of Granular Cell Tumor in Breast Skin and Scalp: Diagnostic Challenging Differentiating Benign from Malignant and a Literature Review.

    PubMed

    Akkaya, Hampar; Toru, Havva Serap; Ayva, Ebru Sebnem; Karabulut, Zulfikar; Durusoy, Cicek

    2016-01-01

    Granular cell tumor (GCT) is a Schwann cell related benign neoplasm of soft tissue. GCT is an uncommon entity that occurs in a wide variety of body sites, but it is generally presented in the skin, oral cavity, superficial soft tissue, and respiratory and digestive tracts. Most of the GCTs are benign but clinically and radiologically these may mimic malignancy. Histopathological diagnosis is gold standard for establishing the true nature of the lesion. GCT is most commonly solitary but in about 10% of cases can be multifocal, usually involving various skin and soft tissue sites versus involving various internal sites. Therefore, these can involve skin and soft tissue or submucosa and viscera. GCT is usually benign; however, local recurrence is common due to incomplete removal. Malignant cases are rarely reported in 1-2% of cases. In this study, we report clinical and histopathological findings of a 36-year-old woman with metachronous GCT in breast and scalp. The clinical features raise the question of whether these are metachronous benign GCTs or whether this is establishment of malignant behavior. The aim of this report is to present the histopathological and clinical features of GCT and the diagnostic challenge of differentiating benign from malignant GCT. PMID:26881167

  1. Could 433 Eros have a Primitive Achondritic Composition?

    NASA Technical Reports Server (NTRS)

    Burbine, T. H.; McCoy, T. J.; Nittler, L. R.; Bell, J. F., III

    2001-01-01

    One of the goals of the NEAR (Near Earth Asteroid Rendezvous) mission to 433 Eros is to determine if it has a meteoritic analog. We are currently investigating if primitive achondrites have bulk compositions and spectral properties similar to Eros. Additional information is contained in the original extended abstract.

  2. PRIMITIVE ADULT HEMATOPOIETIC STEM CELLS CAN FUNCTION AS OSTEOBLAST PRECURSORS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Osteoblasts are continually recruited from stem cell pools to maintain bone. Although their immediate precursor is a plastic-adherent mesenchymal stem cell able to generate tissues other than bone, increasing evidence suggests the existence of a more primitive cell that can differentiate to both hem...

  3. Trigeminal Neuralgia Caused by Persistent Primitive Trigeminal Artery

    PubMed Central

    Park, Chang Kyu; Lee, Sung Ho; Rhee, Bong Arm

    2014-01-01

    A 66-year-old man presented with typical trigeminal neuralgia (TN). Magnetic resonance angiography (MRA) revealed a primitive trigeminal artery (PTA) that came into contact with the trigeminal nerve. Based on MRA, we performed microvascular decompression (MVD). In the operational field, we confirmed the PTA location and performed MVD successfully. Postoperatively, the patient's pain subsided without any complications. PMID:25368776

  4. Trigeminal neuralgia caused by persistent primitive trigeminal artery.

    PubMed

    Park, Chang Kyu; Choi, Hyuk Jai; Lee, Sung Ho; Rhee, Bong Arm

    2014-09-01

    A 66-year-old man presented with typical trigeminal neuralgia (TN). Magnetic resonance angiography (MRA) revealed a primitive trigeminal artery (PTA) that came into contact with the trigeminal nerve. Based on MRA, we performed microvascular decompression (MVD). In the operational field, we confirmed the PTA location and performed MVD successfully. Postoperatively, the patient's pain subsided without any complications. PMID:25368776

  5. Primary extraskeletal Ewing's sarcoma/primitive neuroectodermal tumor of breast

    PubMed Central

    Srivastava, Smita; Arora, Jyoti; Parakh, Anushri; Goel, Ruchika Kumar

    2016-01-01

    Extraskeletal Ewing's sarcoma (EES) is a rare soft tissue tumor that is morphologically indistinguishable from skeletal ES. We report a case of a 25-year-old female with recurrent EES/primitive neuroectodermal tumor of right breast with imaging findings on mammogram, ultrasound, magnetic resonance imaging breast, and positron emission tomography–computed tomography. PMID:27413270

  6. Enhancement and diversity of primitive cotton, Gossypium hirsutum L., accessions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cotton, Gossypium hirsutum L., is an important cultivated crop that is grown throughout the world. Improvements in agronomic performance and fiber quality are needed to ensure its economic viability. Primitive accessions of cotton offer a wealth of genetic variability; however, since most of these...

  7. PARTI primitives for unstructured and block structured problems

    NASA Technical Reports Server (NTRS)

    Sussman, Alan; Saltz, Joel; Das, Raja; Gupta, S.; Mavriplis, Dimitri; Ponnusamy, Ravi; Crowley, Kay

    1992-01-01

    Described here is a set of primitives (PARTI) developed to efficiently execute unstructured and block structured problems on distributed memory parallel machines. We present experimental data from a 3-D unstructured Euler solver run on the Intel Touchstone Delta to demonstrate the usefulness of our methods.

  8. Viral serostatus and coexisting inflammatory activity affect metachronous carcinogenesis after hepatectomy for hepatocellular carcinoma. A further report.

    PubMed

    Yamanaka, N; Takada, M; Tanaka, T; Yamanaka, J; Yasui, C; Ando, T; Maeda, S; Matsushita, K; Okamoto, E

    2000-01-01

    analysis, we can conclude that the severity of virally induced inflammation, which was well correlated with viral serostatus, may be a factor that affects intrahepatic recurrence, which is more likely to originate from metachronous carcinogenesis. Prior co-infection of HBV in HCV patients may not be an adverse risk factor for intrahepatic recurrence. PMID:10755690

  9. Flexible building primitives for 3D building modeling

    NASA Astrophysics Data System (ADS)

    Xiong, B.; Jancosek, M.; Oude Elberink, S.; Vosselman, G.

    2015-03-01

    3D building models, being the main part of a digital city scene, are essential to all applications related to human activities in urban environments. The development of range sensors and Multi-View Stereo (MVS) technology facilitates our ability to automatically reconstruct level of details 2 (LoD2) models of buildings. However, because of the high complexity of building structures, no fully automatic system is currently available for producing building models. In order to simplify the problem, a lot of research focuses only on particular buildings shapes, and relatively simple ones. In this paper, we analyze the property of topology graphs of object surfaces, and find that roof topology graphs have three basic elements: loose nodes, loose edges, and minimum cycles. These elements have interesting physical meanings: a loose node is a building with one roof face; a loose edge is a ridge line between two roof faces whose end points are not defined by a third roof face; and a minimum cycle represents a roof corner of a building. Building primitives, which introduce building shape knowledge, are defined according to these three basic elements. Then all buildings can be represented by combining such building primitives. The building parts are searched according to the predefined building primitives, reconstructed independently, and grouped into a complete building model in a CSG-style. The shape knowledge is inferred via the building primitives and used as constraints to improve the building models, in which all roof parameters are simultaneously adjusted. Experiments show the flexibility of building primitives in both lidar point cloud and stereo point cloud.

  10. A new algorithm for computing primitive elements in GF q square

    NASA Technical Reports Server (NTRS)

    Reed, I. S.; Truong, T. K.; Miller, R. L.

    1978-01-01

    A new method is developed to find primitive elements in the Galois field of sq q elements GF(sqq), where q is a Mersenne prime. Such primitive elements are needed to implement transforms over GF(sq q).

  11. Cancer

    MedlinePlus

    ... body. Cancerous cells are also called malignant cells. Causes Cancer grows out of cells in the body. Normal ... of many cancers remains unknown. The most common cause of cancer-related death is lung cancer. In the U.S., ...

  12. [Synchronous or metachronous extragastric neoplasms associated with gastric neoplasia. Common pathogenesis of gastric intestinal and colonic carcinoma?].

    PubMed

    Planells Roig, M V; García Espinosa, R; Morcillo Ródenas, R; Rodero Rodero, D

    1990-12-01

    Coexistence of syncronous or metacronous extragastric carcinomas, particularly of the colon and small bowel may favour the hypothesis of a common origin with gastric carcinoma. Three cases of colonic carcinoma coexisting with early gastric cancer, are presented. The etiopathogenesis of intestinal-type gastric cancer and colonic cancer are discussed in the light of a possible common mechanism. PMID:2091707

  13. Isolated splenic metastasis from colon cancer: Case report

    PubMed Central

    Abdou, Jiddou; Omor, Youssef; Boutayeb, Saber; Elkhannoussi, Basma; Errihani, Hassan

    2016-01-01

    Isolated splenic metastases from colorectal cancer are very rare clinical entities and when they are present, they usually manifest widely disseminated disease. In this paper we report a case of metachronous solitary isolated splenic metastasis from colon cancer in a 64-year-old woman who was successfully treated by laparoscopic splenectomy. We discuss the pathological and clinical aspects of this condition. We furthermore comment on the diagnostic and therapeutic options of this rare entity through our observation of the case and consideration of the 31 case reports published in the literature. PMID:27182171

  14. Isolated splenic metastasis from colon cancer: Case report.

    PubMed

    Abdou, Jiddou; Omor, Youssef; Boutayeb, Saber; Elkhannoussi, Basma; Errihani, Hassan

    2016-05-14

    Isolated splenic metastases from colorectal cancer are very rare clinical entities and when they are present, they usually manifest widely disseminated disease. In this paper we report a case of metachronous solitary isolated splenic metastasis from colon cancer in a 64-year-old woman who was successfully treated by laparoscopic splenectomy. We discuss the pathological and clinical aspects of this condition. We furthermore comment on the diagnostic and therapeutic options of this rare entity through our observation of the case and consideration of the 31 case reports published in the literature. PMID:27182171

  15. Right upper lobe lung cancer: Resection through left anterior mediastinotomy.

    PubMed

    Sirois, Marco; Abu Arab, Walid; Turcotte, Eric; Poulin, Yannick

    2016-01-01

    There is sparse information concerning approaches to metachronous lung cancer in patients who had a previous pneumonectomy for lung carcinoma. We describe the case of a 55-year-old woman who underwent a left pneumonectomy for lung carcinoma. Four years later, a radiological examination revealed a hypermetabolic nodule in the right upper lobe, which was located in the left hemithorax because of right lung hyperinflation and a mediastinal shift to the left. Wedge resection was carried out through a left anterior mediastinotomy. We believe that an anterior mediastinotomy represents a valuable option for the management of recurrent lung cancer after previous surgery. PMID:26124429

  16. Distributed computation of graphics primitives on a transputer network

    NASA Technical Reports Server (NTRS)

    Ellis, Graham K.

    1988-01-01

    A method is developed for distributing the computation of graphics primitives on a parallel processing network. Off-the-shelf transputer boards are used to perform the graphics transformations and scan-conversion tasks that would normally be assigned to a single transputer based display processor. Each node in the network performs a single graphics primitive computation. Frequently requested tasks can be duplicated on several nodes. The results indicate that the current distribution of commands on the graphics network shows a performance degradation when compared to the graphics display board alone. A change to more computation per node for every communication (perform more complex tasks on each node) may cause the desired increase in throughput.

  17. Deuterium enrichment in the primitive ices of the protosolar nebula

    NASA Technical Reports Server (NTRS)

    Lutz, Barry L.; Owen, Tobias; De Bergh, Catherine

    1990-01-01

    On the basis of CH3D/CH4-ratio observations in the outer planets, the present effort to estimate the D/H ratio of the protosolar nebula's primitive ices arrives at two simple, yet effectively limiting models which constrain the degree of dilution undergone by deuterated volatiles through mixing with the initial hydrogen envelopes. These volatiles would have been contributed to planetary atmospheres by evaporated primordial ices. Ice D/H ratio model results of 0.0001 to 0.001 are compared with values for other potentially primitive material-containing bodies in the solar system, as well as with D/H ratio values from interstellar polyatomic molecules.

  18. Phosphorus, a key to life on the primitive earth

    NASA Technical Reports Server (NTRS)

    Griffith, E. J.; Ponnamperuma, C.; Gabel, N. W.

    1977-01-01

    The phosphorus of the primitive earth was present as phosphates. It is strongly probable that a portion of the phosphate was present as condensed phosphates. The primitive earth was highly deficient in the total available phosphorus until a sufficient quantity of phosphorus weathered from the igneous rocks in which it was entrapped. Approximately three billion years were required for the seas to become saturated. Until this time passed the seas acted as a giant sink for phosphorus, diluting it to the extent that all forms of life were deprived of the vital nutrient. When the seas became saturated, the rate of turnover of the phosphorus increased rapidly. As the seas pulsated, they left the excess precipitate phosphorus as sedimentary rock in locally rich deposits on which life could thrive.

  19. Morphological Study of Insoluble Organic Matter Residues from Primitive

    NASA Technical Reports Server (NTRS)

    Changela, H. G.; Stroud, R. M.; Peeters, Z.; Nittler, L. R.; Alexander, C. M. O'D.; DeGregorio, B. T.; Cody, G. D.

    2012-01-01

    Insoluble organic matter (IOM) constitutes a major proportion, 70-99%, of the total organic carbon found in primitive chondrites [1, 2]. One characteristic morphological component of IOM is nanoglobules [3, 4]. Some nanoglobules exhibit large N-15 and D enrichments relative to solar values, indicating that they likely originated in the ISM or the outskirts of the protoplanetary disk [3]. A recent study of samples from the Tagish Lake meteorite with varying levels of hydrothermal alteration suggest that nanoglobule abundance decreases with increasing hydrothermal alteration [5]. The aim of this study is to further document the morphologies of IOM from a range of primitive chondrites in order to determine any correlation of morphology with petrographic grade and chondrite class that could constrain the formation and/or alteration mechanisms.

  20. Collaboration between primitive cell membranes and soluble catalysts.

    PubMed

    Adamala, Katarzyna P; Engelhart, Aaron E; Szostak, Jack W

    2016-01-01

    One widely held model of early life suggests primitive cells consisted of simple RNA-based catalysts within lipid compartments. One possible selective advantage conferred by an encapsulated catalyst is stabilization of the compartment, resulting from catalyst-promoted synthesis of key membrane components. Here we show model protocell vesicles containing an encapsulated enzyme that promotes the synthesis of simple fatty acid derivatives become stabilized to Mg(2+), which is required for ribozyme activity and RNA synthesis. Thus, protocells capable of such catalytic transformations would have enjoyed a selective advantage over other protocells in high Mg(2+) environments. The synthetic transformation requires both the catalyst and vesicles that solubilize the water-insoluble precursor lipid. We suggest that similar modified lipids could have played a key role in early life, and that primitive lipid membranes and encapsulated catalysts, such as ribozymes, may have acted in conjunction with each other, enabling otherwise-impossible chemical transformations within primordial cells. PMID:26996603

  1. Collaboration between primitive cell membranes and soluble catalysts

    PubMed Central

    Adamala, Katarzyna P.; Engelhart, Aaron E.; Szostak, Jack W.

    2016-01-01

    One widely held model of early life suggests primitive cells consisted of simple RNA-based catalysts within lipid compartments. One possible selective advantage conferred by an encapsulated catalyst is stabilization of the compartment, resulting from catalyst-promoted synthesis of key membrane components. Here we show model protocell vesicles containing an encapsulated enzyme that promotes the synthesis of simple fatty acid derivatives become stabilized to Mg2+, which is required for ribozyme activity and RNA synthesis. Thus, protocells capable of such catalytic transformations would have enjoyed a selective advantage over other protocells in high Mg2+ environments. The synthetic transformation requires both the catalyst and vesicles that solubilize the water-insoluble precursor lipid. We suggest that similar modified lipids could have played a key role in early life, and that primitive lipid membranes and encapsulated catalysts, such as ribozymes, may have acted in conjunction with each other, enabling otherwise-impossible chemical transformations within primordial cells. PMID:26996603

  2. Quantifying Mapping Orbit Performance in the Vicinity of Primitive Bodies

    NASA Technical Reports Server (NTRS)

    Pavlak, Thomas A.; Broschart, Stephen B.; Lantoine, Gregory

    2015-01-01

    Predicting and quantifying the capability of mapping orbits in the vicinity of primitive bodies is challenging given the complex orbit geometries that exist and the irregular shape of the bodies themselves. This paper employs various quantitative metrics to characterize the performance and relative effectiveness of various types of mapping orbits including terminator, quasi-terminator, hovering, pingpong, and conic-like trajectories. Metrics of interest include surface area coverage, lighting conditions, and the variety of viewing angles achieved. The metrics discussed in this investigation are intended to enable mission designers and project stakeholders to better characterize candidate mapping orbits during preliminary mission formulation activities.The goal of this investigation is to understand the trade space associated with carrying out remotesensing campaigns at small primitive bodies in the context of a robotic space mission. Specifically,this study seeks to understand the surface viewing geometries, ranges, etc. that are available fromseveral commonly proposed mapping orbits architectures.

  3. A primitive protostegid from Australia and early sea turtle evolution

    PubMed Central

    Kear, Benjamin P; Lee, Michael S.Y

    2005-01-01

    Sea turtles (Chelonioidea) are a prominent group of modern marine reptiles whose early history is poorly understood. Analysis of exceptionally well preserved fossils of Bouliachelys suteri gen. et sp. nov., a large-bodied basal protostegid (primitive chelonioid) from the Early Cretaceous (Albian) of Australia, indicates that early sea turtles were both larger and more diverse than previously thought. The analysis implies at least five distinct sea turtle lineages existed around 100 million years ago. Currently, the postcranially primitive Ctenochelys and Toxochelys are interpreted as crown-group sea turtles closely related to living cheloniids (e.g. Chelonia); in contrast, the new phylogeny suggests that they are transitional (intermediate stem-taxa) between continental testudines and derived, pelagic chelonioids. PMID:17148342

  4. The mental organization of primitive personalities and its treatment implications.

    PubMed

    Robbins, M

    1996-01-01

    A description is presented of the mental organization of primitive personalities (American borderlines, British paranoid-schizoid), as well as a generic course of analytic therapy I have sometimes experienced with them. Their mental organization may be qualitatively rather than quantitatively different from that of less disturbed persons. The differences are mostly attributable to a rudimentary psychic differentiation and integration, and compensatory pathological relationships. This configuration is hypothesized to have a unique developmental course, originating from a combination of constitutional factors and adaptation to a pathogenic interpersonal environment. Failure to appreciate the qualitative differences between the minds of the analyst and his less disturbed patients, on the one hand, and the mind of the primitive personality, on the other, may lead the analyst to employ unsuitable modes of analytic intervention with unfortunate consequences. PMID:8892187

  5. Are carbonaceous chondrites primitive or processed - A review

    NASA Technical Reports Server (NTRS)

    Mcsween, H. Y., Jr.

    1979-01-01

    According to the results of the present analysis, carbonaceous chondrites are obviously not pristine samples of proto-solar-system condensates. In terms of chemistry, however, these chondrites may represent the most primitive solar system materials known. It appears that the alterations experienced by carbonaceous chondrites were isochemical, or nearly so, so that their bulk compositions have remained practically unchanged, provided that the analyses are representative of large portions of the meteorites.

  6. [Persistent primitive trigeminal artery: critical review of the clinical significance].

    PubMed

    Oliveira, H A; Passos, J D; Barbosa, M B; Do Amorim, E A

    1991-09-01

    The authors report three cases of persistence of primitive trigeminal artery with no evidence of a relationship between its presence and any specific clinical syndrome. They discuss embryological aspects and establish the correlation between the presence of this malformation and other intracranial pathologies, such as "tic douloureux" and morphologic alteration of the circle of Willis. A critical review of the literature is also presented. PMID:1807233

  7. Transitions between discrete and rhythmic primitives in a unimanual task

    PubMed Central

    Sternad, Dagmar; Marino, Hamal; Charles, Steven K.; Duarte, Marcos; Dipietro, Laura; Hogan, Neville

    2013-01-01

    Given the vast complexity of human actions and interactions with objects, we proposed that control of sensorimotor behavior may utilize dynamic primitives. However, greater computational simplicity may come at the cost of reduced versatility. Evidence for primitives may be garnered by revealing such limitations. This study tested subjects performing a sequence of progressively faster discrete movements in order to “stress” the system. We hypothesized that the increasing pace would elicit a transition to rhythmic movements, assumed to be computationally and neurally more efficient. Abrupt transitions between the two types of movements would support the hypothesis that rhythmic and discrete movements are distinct primitives. Ten subjects performed planar point-to-point arm movements paced by a metronome: starting at 2 s, the metronome intervals decreased by 36 ms per cycle to 200 ms, stayed at 200 ms for several cycles, then increased by similar increments. Instructions emphasized to insert explicit stops between each movement with a duration that equaled the movement time. The experiment was performed with eyes open and closed, and with short and long metronome sounds, the latter explicitly specifying the dwell duration. Results showed that subjects matched instructed movement times but did not preserve the dwell times. Rather, they progressively reduced dwell time to zero, transitioning to continuous rhythmic movements before movement times reached their minimum. The acceleration profiles showed an abrupt change between discrete and rhythmic profiles. The loss of dwell time occurred earlier with long auditory specification, when subjects also showed evidence of predictive control. While evidence for hysteresis was weak, taken together, the results clearly indicated a transition between discrete and rhythmic movements, supporting the proposal that representation is based on primitives rather than on veridical internal models. PMID:23888139

  8. Polymorphic microsatellite loci for primitively eusocial wasp Ropalidia marginata.

    PubMed

    Johny, S; Chakraborty, S; Gadagkar, R; Nagaraju, J

    2009-07-01

    We report here development and characterization of 48 novel microsatellite markers for Ropalidia marginata, a tropical, primitively eusocial polistine wasp from peninsular India. Thirty-two microsatellites showed polymorphism in a wild population of R. marginata (N = 38) collected from Bangalore, India. These markers will facilitate answering some interesting questions in ecology and evolutionary biology of this wasp, such as population structure, serial polygyny, intra-colony genetic relatedness and the pattern of queen succession. PMID:21564866

  9. Some results for the primitive equations with physical boundary conditions

    NASA Astrophysics Data System (ADS)

    Evans, Lawrence Christopher; Gastler, Robert

    2013-12-01

    In this paper, we consider the (simplified) 3-dimensional primitive equations with physical boundary conditions. We show that the equations with constant forcing have a bounded absorbing ball in the H 1-norm and that a solution to the unforced equations has its H 1-norm decay to 0. From this, we argue that there exists an invariant measure (on H 1) for the equations under random kick-forcing.

  10. Odorant-binding proteins from a primitive termite.

    PubMed

    Ishida, Yuko; Chiang, Vicky P; Haverty, Michael I; Leal, Walter S

    2002-09-01

    Hitherto, odorant-binding proteins (OBPs) have been identified from insects belonging to more highly evolved insect orders (Lepidoptera, Coleoptera, Diptera, Hymenoptera, and Hemiptera), whereas only chemosensory proteins have been identified from more primitive species, such as orthopteran and phasmid species. Here, we report for the first time the isolation and cloning of odorant-binding proteins from a primitive termite species, the dampwood termite. Zootermopsis nevadensis nevadensis (Isoptera: Termopsidae). A major antennae-specific protein was detected by native PAGE along with four other minor proteins, which were also absent in the extract from control tissues (hindlegs). Multiple cDNA cloning led to the full characterization of the major antennae-specific protein (ZnevOBP1) and to the identification of two other antennae-specific cDNAs, encoding putative odorant-binding proteins (ZnevOBP2 and ZnevOBP3). N-terminal amino acid sequencing of the minor antennal bands and cDNA cloning showed that olfaction in Z. n. nevadensis may involve multiple odorant-binding proteins. Database searches suggest that the OBPs from this primitive termite are homologues of the pheromone-binding proteins from scarab beetles and antennal-binding proteins from moths. PMID:12449514

  11. Slow dynamics in a primitive tetrahedral network model.

    PubMed

    De Michele, Cristiano; Tartaglia, Piero; Sciortino, Francesco

    2006-11-28

    We report extensive Monte Carlo and event-driven molecular dynamics simulations of the fluid and liquid phase of a primitive model for silica recently introduced by Ford et al. [J. Chem. Phys. 121, 8415 (2004)]. We evaluate the isodiffusivity lines in the temperature-density plane to provide an indication of the shape of the glass transition line. Except for large densities, arrest is driven by the onset of the tetrahedral bonding pattern and the resulting dynamics is strong in Angell's classification scheme [J. Non-Cryst. Solids 131-133, 13 (1991)]. We compare structural and dynamic properties with corresponding results of two recently studied primitive models of network forming liquids-a primitive model for water and an angular-constraint-free model of four-coordinated particles-to pin down the role of the geometric constraints associated with bonding. Eventually we discuss the similarities between "glass" formation in network forming liquids and "gel" formation in colloidal dispersions of patchy particles. PMID:17144726

  12. Pills for the Poor: John Wesley's Primitive Physick

    PubMed Central

    Rogal, Samuel J.

    1978-01-01

    While John Wesley's Primitive Physick (1747) cannot be termed a classic of British medical literature, it must certainly be identified as one of the most popular volumes published in England during the eighteenth century. Although the work came under attack from contemporary surgeons, physicians, and apothecaries, who maintained that its remedies were founded upon ignorance, Wesley probably knew as much as most members of the medical profession; in fact, on no less than twenty instances throughout the volume, he paraphrases or cites directly from prominent physicians and theorists—such figures as Sydenham, Boerhaave, Cheyne, Mead, and Huxham. However, despite its obvious emphasis upon practical remedies, the underlying focus of Primitive Physick is upon the soul of man. Wesley had consulted some sources, common sense, and his own experience, tempering those with the general principle of “doing good to all men,” particularly “those who desire to live according to the gospel....” Thus, the Methodist patriarch's own formula for life had as much to do with the spread of Primitive Physick throughout eighteenth-century Britain and America as did all of the remedies and suggestions imprinted upon its pages. PMID:354225

  13. Regulation of Primitive Hematopoiesis by Class I Histone Deacetylases

    PubMed Central

    Shah, Rishita R.; Koniski, Anne; Shinde, Mansi; Blythe, Shelby A.; Fass, Daniel M.; Haggarty, Stephen J.; Palis, James; Klein, Peter S.

    2013-01-01

    Background Histone deacetylases (HDACs) regulate multiple developmental processes and cellular functions. However, their roles in blood development have not been determined, and in Xenopus laevis, a specific function for HDACs has yet to be identified. Here, we employed the class I selective HDAC inhibitor, valproic acid (VPA), to show that HDAC activity is required for primitive hematopoiesis. Results VPA treatment during gastrulation resulted in a complete absence of red blood cells (RBCs) in Xenopus tadpoles, but did not affect development of other mesodermal tissues, including myeloid and endothelial lineages. These effects of VPA were mimicked by Trichostatin A (TSA), a well-established pan-HDAC inhibitor, but not by valpromide, which is structurally similar to VPA but does not inhibit HDACs. VPA also caused a marked, dose-dependent loss of primitive erythroid progenitors in mouse yolk sac explants at clinically relevant concentrations. In addition, VPA treatment inhibited erythropoietic development downstream of bmp4 and gata1 in Xenopus ectodermal explants. Conclusions These findings suggest an important role for class I HDACs in primitive hematopoiesis. Our work also demonstrates that specific developmental defects associated with exposure to VPA, a significant teratogen in humans, arise through inhibition of class I HDACs. PMID:23184530

  14. Follow-up and surveillance of the lung cancer patient following curative-intent therapy.

    PubMed

    Colice, Gene L; Rubins, Jeffrey; Unger, Michael

    2003-01-01

    The following two distinctly different issues should be taken into account when planning patient care following curative-intent therapy for lung cancer: adequate follow-up to manage complications related to the curative-intent therapy; and surveillance to detect recurrences of the primary lung cancer and/or development of a new primary lung cancer early enough to allow potentially curative retreatment. Follow-up for complications should be performed by the specialist responsible for the curative-intent therapy and should last 3 to 6 months. Recurrences of the original lung cancer will be more likely during the first 2 years after curative-intent therapy, but there will be an increased lifelong risk of approximately 1 to 2% per year of developing a metachronous, or new primary, lung cancer. A standard surveillance program for these patients is recommended based on periodic visits, with chest-imaging studies and counseling patients on symptom recognition. Whether subgroups of patients with a higher risk of developing a metachronous lung cancer (eg, those patients whose primary lung cancer was radiographically occult or central and those patients surviving for > 2 years after treatment for small cell lung cancer) should have a more intensive surveillance program is presently unclear. The surveillance program should be coordinated by a multidisciplinary tumor board and overseen by the physician who diagnosed and initiated therapy for the original lung cancer. Smoking cessation is recommended for all patients following curative-intent therapy for lung cancer. PMID:12527585

  15. [Therapeutic strategy for secondary lung cancer].

    PubMed

    Miura, Hiroyuki; Nakajima, Norio; Takahashi, Hidenobu; Kinoshita, Masao; Ikeda, Norihiko

    2010-10-01

    Among 659 resected lung cancer cases from 1994 to 2009, 57 secondary lung cancers (8.6%) were evaluated. The secondary tumors were synchronous, located in the same lobe in 10, the ipsilateral different lobe in 17, and the contralateral lobe in 13, or metachronous, located in the contralateral lobe in 15, and the ipsilateral different lobe in 5. Both the tumors were removed in 49 cases. Chemotherapy, stereotactic radiotherapy (SRT), photo dynamic therapy (PDT), or best supportive care (BSC) was selected after a lobectomy or segmentectomy of the 1st tumor in 8 cases considering the patient's condition. Lobectomy or segmentectomy should be indicated for the 1st tumor considering curability. Bilobectomy is adopted for multiple cancers involving middle lobe. According to the operability or pulmonary function, the same strategy is adopted for secondary cancer. Considering the patient's condition, possibility of metastases and the tumor location and histologic type, partial resection, SRT, PDT, or BSC could be selected. PMID:20954350

  16. Bilateral persistent primitive trigeminal arteries associated with trigeminal neuralgia.

    PubMed

    Son, B; Yang, S; Sung, J; Lee, S

    2013-03-01

    Persistent carotid-vertebrobasilar anastomoses (PCVBA) include the primitive trigeminal artery (PTA), the primitive otic artery (POA), the primitive hypoglossal artery and proatlantal arteries (ProAs). The PTA is the most commonly seen of these accounting for approximately 80-85% of PCVBAs. The PTA which connects the internal carotid artery (ICA) to the basilar artery (BA) may occasionally connect to the superior or posterior inferior cerebellar arteries without interposition to the BA. It is then referred to as a persistent trigeminal artery variant (PTAV), an anomalous carotid-cerebellar anastomosis. Bilateral occurrence of PTA is extremely rare. During vertebral artery (VA) development the anterior radicular artery of segment C1 from the proatlantal artery of Padget evolves into the intradural component of the VA (V4 segment) plus a short extradural segment (distal V3 segment). Agenesis of a single anterior radicular artery of ProA results in the absence of one distal VA associated with an unremarkable contralateral VA and the BA. Absence or hypoplasia of the terminal portion of one VA is a commonly observed anatomic variant. However, absence of the terminal portions of both VAs is exceptional. A rare case of bilateral PTAs is presented with unilateral PTA and a contralateral PTAV causing trigeminal neuralgia. Furthermore, the bilateral PTAs were associated with the absence of the proximal portion of the BA in addition to the bilateral lack of a distal VA. This finding comes as a logical consequence of the developmental anatomy of the vertebrobasilar junction and is consistent with the assumed congenital nature of the anatomic variant. PMID:22113402

  17. Mesoscale Eddy Parameterization in an Idealized Primitive Equations Model

    NASA Astrophysics Data System (ADS)

    Anstey, J.; Zanna, L.

    2014-12-01

    Large-scale ocean currents such as the Gulf Stream and Kuroshio Extension are strongly influenced by mesoscale eddies, which have spatial scales of order 10-100 km. The effects of these eddies are poorly represented in many state-of-the-art ocean general circulation models (GCMs) due to the inadequate spatial resolution of these models. In this study we examine the response of the large-scale ocean circulation to the rectified effects of eddy forcing - i.e., the role played by surface-intensified mesoscale eddies in sustaining and modulating an eastward jet that separates from an intense western boundary current (WBC). For this purpose a primitive equations ocean model (the MITgcm) in an idealized wind-forced double-gyre configuration is integrated at eddy-resolving resolution to reach a forced-dissipative equilibrium state that captures the essential dynamics of WBC-extension jets. The rectified eddy forcing is diagnosed as a stochastic function of the large-scale state, this being characterized by the manner in which potential vorticity (PV) contours become deformed. Specifically, a stochastic function based on the Laplacian of the material rate of change of PV is examined in order to compare the primitive equations results with those of a quasi-geostrophic model in which this function has shown some utility as a parameterization of eddy effects (Porta Mana and Zanna, 2014). The key question is whether an eddy parameterization based on quasi-geostrophic scaling is able to carry over to a system in which this scaling is not imposed (i.e. the primitive equations), in which unbalanced motions occur.

  18. Statistical study of aqueous alteration on primitive asteroids

    NASA Astrophysics Data System (ADS)

    Lantz, Cateline; Fornasier, S.; Barucci, M.

    2013-10-01

    The study of aqueous alteration is particularly important for unraveling the thermal and chemical conditions existing during the earliest times in Solar System history. The process consists in the low temperature (< 320 K) chemical alteration of materials by liquid water which acts as a solvent and produces hydrated materials. Hydrated minerals have been detected on main belt C, G, P, B and F-types asteroids as defined by Tholen taxonomy. Studying visible spectra of primitive bodies, one can detect signatures of phyllosilicates like the Fe2+-Fe3+ transition band centered around 0.7 microns. We have investigated 600 spectra of these primitive bodies available in the literature (Vilas observations 1982-1992, Sawyer PhD thesis 1991, Xu et al. 1995, Fornasier et al. 1999, Bus & Binzel 2002 and Lazzaro et al. 2004) and from our own observations, and we have characterized the 0.7 microns band when present. We have examined all the possible relationships between the aqueous alteration process and asteroid taxonomic classes, orbital elements, heliocentric distances, albedo and sizes of these objects. We find that the percentage of hydrated asteroids is 5% for the P, 8% for the F, 10% for the B, 51% for the C, and 100% for the G-type asteroids. The process seems to be mostly active on primitive asteroids located between 2.3 and 3.2 AU. The number of hydrated asteroids increases with the size and dominates for bodies larger than 100km. We also compare the properties of the 0.7 microns absorption band seen on asteroids with the one seen on CM carbonaceous chondrites spectra (from RELAB data): aqueous altered asteroids are the plausible parent bodies of CM2 meteorites, but we see a systematic difference in the band center position.

  19. Characteristics of Quasi-Terminator Orbits Near Primitive Bodies

    NASA Technical Reports Server (NTRS)

    Broschart, Stephen B.; Lantoine, Gregory; Grebow, Daniel J.

    2013-01-01

    Quasi-terminator orbits are introduced as a class of quasi-periodic trajectories in the solar radiation pressure (SRP) perturbed Hill dynamics. These orbits offer significant displacements along the Sun-direction without the need for station-keeping maneuvers. Thus, quasi-terminator orbits have application to primitive-body missions, where a variety of observation geometries relative to the Sun (or other directions) can be achieved. This paper describes the characteristics of these orbits as a function of normalized SRP strength and invariant torus frequency ratio and presents a discussion of mission design considerations for a global surface mapping orbit design.

  20. Mission Design for Global Mapping Orbits at Primitive Bodies

    NASA Technical Reports Server (NTRS)

    Lantoine, Gregory; Broschart, Stephen B.; Grebow, Daniel J.

    2013-01-01

    Global mapping campaigns are part of most primitive body exploration missions. However, designing a mapping orbit without station keeping maneuvers is challenging due to the highly perturbed environment near small bodies. In this paper, we present a new design methodology to support mapping campaigns using 'quasi-terminator' orbits, a class of quasi-periodic orbits that exist in the vicinity of the well-known terminator orbits. The inherent stability of quasi-terminator trajectories and their wide variety of viewing geometries make them a very compelling option for mapping campaigns. A high-fidelity test case solution is also presented to prove the existence of these mapping orbits in full ephemeris.

  1. SALMON RIVER BREAKS PRIMITIVE AREA AND VICINITY, IDAHO.

    USGS Publications Warehouse

    Kiilsgaard, Thor H.; Tuchek, Ernest T.

    1984-01-01

    A mineral survey of the Salmon River Breaks Primitive Area and vicinity in Idaho confirmed a substantiated gold resource potential in placer deposits along the Salmon River but determined that large-scale mining of the deposits probably would not be feasible. Except for demonstrated fluorspar resources at the Big Squaw Creek deposit, no other mineral resources were found in the area. The geologic environment, geochemical findings, and geophysical data all suggest little likelihood for the occurrence of additional mineral resources in the area. No energy resources were identified in this study.

  2. Dust formation in a galaxy with primitive abundances.

    PubMed

    Sloan, G C; Matsuura, M; Zijlstra, A A; Lagadec, E; Groenewegen, M A T; Wood, P R; Szyszka, C; Bernard-Salas, J; van Loon, J Th

    2009-01-16

    Interstellar dust plays a crucial role in the evolution of galaxies. It governs the chemistry and physics of the interstellar medium. In the local universe, dust forms primarily in the ejecta from stars, but its composition and origin in galaxies at very early times remain controversial. We report observational evidence of dust forming around a carbon star in a nearby galaxy with a low abundance of heavy elements, 25 times lower than the solar abundance. The production of dust by a carbon star in a galaxy with such primitive abundances raises the possibility that carbon stars contributed carbonaceous dust in the early universe. PMID:19150838

  3. Amorphous Silicates in Primitive Meteoritic Materials: Acfer 094 and IDPs

    NASA Technical Reports Server (NTRS)

    Keller, L. P.; Nakamura-Messenger, K.; Messenger, S.; Walker, Robert M.

    2009-01-01

    The abundance of presolar grains is one measure of the primitive nature of meteoritic materials. Presolar silicates are abundant in meteorites whose matrices are dominated by amorphous silicates such as the unique carbonaceous chondrite Acfer 094. Presolar silicates are even more abundant in chondritic-porous interplanetary dust particles (CP-IDPs). Amorphous silicates in the form of GEMS (glass with embedded metal and sulfides) grains are a major component of CP IDPs. We are studying amorphous silicates in Acfer 094 matrix in order to determine whether they are related to the GEMS grains in CPIDPs

  4. Circular-Orbit Maintenance Strategies for Primitive Body Orbiters

    NASA Technical Reports Server (NTRS)

    Wallace, Mark S.; Broschart, Stephen

    2013-01-01

    For missions to smaller primitive bodies, solar radiation pressure (SRP) is a significant perturbation to Keplerian dynamics. For most orbits, SRP drives large oscillations in orbit eccentricity, which leads to large perturbations from the irregular gravity field at periapsis. Ultimately, chaotic motion results that often escapes or impacts that body. This paper presents an orbit maintenance strategy to keep the orbit eccentricity small, thus avoiding the destabilizing secondary interaction with the gravity field. An estimate of the frequency and magnitude of the required maneuvers as a function of the orbit and body parameters is derived from the analytic perturbation equations.

  5. Pathwise Solutions of the 2-D Stochastic Primitive Equations

    SciTech Connect

    Glatt-Holtz, Nathan Temam, Roger

    2011-06-15

    In this work we consider a stochastic version of the Primitive Equations (PEs) of the ocean and the atmosphere and establish the existence and uniqueness of pathwise, strong solutions. The analysis employs novel techniques in contrast to previous works (Ewald et al. in Anal. Appl. (Singap.) 5(2):183-198, 2007; Glatt-Holtz and Ziane in Discrete Contin. Dyn. Syst. Ser. B 10(4):801-822, 2008) in order to handle a general class of nonlinear noise structures and to allow for physically relevant boundary conditions. The proof relies on Cauchy estimates, stopping time arguments and anisotropic estimates.

  6. Photochemical production of formaldehyde in earth's primitive atmosphere

    NASA Astrophysics Data System (ADS)

    Pinto, J. P.; Gladstone, G. R.; Yung, Y. L.

    1980-10-01

    Formaldehyde could have been produced by photochemical reactions in the earth's primitive atmosphere, at a time when it consisted mainly of molecular nitrogen, water vapor, carbon dioxide, and trace amounts of molecular hydrogen and carbon monoxide. Removal of formaldehyde from the atmosphere by precipitation can provide a source of organic carbon to the oceans at the rate of 100 billion moles per year. Subsequent reactions of formaldehyde in primeval aquatic environments would have implications for the abiotic synthesis of complex organic molecules and the origin of life.

  7. Photochemical production of formaldehyde in earth's primitive atmosphere

    NASA Technical Reports Server (NTRS)

    Pinto, J. P.; Gladstone, G. R.; Yung, Y. L.

    1980-01-01

    Formaldehyde could have been produced by photochemical reactions in the earth's primitive atmosphere, at a time when it consisted mainly of molecular nitrogen, water vapor, carbon dioxide, and trace amounts of molecular hydrogen and carbon monoxide. Removal of formaldehyde from the atmosphere by precipitation can provide a source of organic carbon to the oceans at the rate of 100 billion moles per year. Subsequent reactions of formaldehyde in primeval aquatic environments would have implications for the abiotic synthesis of complex organic molecules and the origin of life.

  8. CLOUD PEAK PRIMITIVE AREA AND ADJACENT AREAS, WYOMING.

    USGS Publications Warehouse

    Kiilsgaard, Thor H.; Patten, Lowell L.

    1984-01-01

    The results of a mineral survey of the Cloud Peak Primitive Area and adjacent areas in Wyoming indicated little promise for the occurrence of mineral resources. There are some prospect workings, particularly in the northern part of the area, but in none of them were there indications that ore had been mined. Samples from the workings, from nearby rocks and sediments from streams that drain the area did not yield any metal values of significance. The crystalline rocks that underlie the area do not contain oil and gas or coal, products that are extracted from the younger rocks that underlie basins on both sides of the study area.

  9. An optochemically organized nonlinear waveguide lattice with primitive cubic symmetry.

    PubMed

    Ponte, Matthew R; Welch, Robert; Saravanamuttu, Kalaichelvi

    2013-02-25

    We describe the first example of a primitive cubic lattice assembled spontaneously from three mutually orthogonal and intersecting arrays of cylindrical, multimode waveguides. The lattice is generated in a single, room-temperature step with separate (mutually incoherent) incandescent light bulbs. To demonstrate its potential as a nonlinear photonic lattice, we generated a self-trapped lattice beam of incoherent white light. These two findings open entirely new experimental opportunities to study the behavior of spatially and temporally incoherent, polychromatic lattice solitons in 3-D Bravais lattices. PMID:23481954

  10. Analysis of extraembryonic mesodermal structure formation in the absence of morphological primitive streak.

    PubMed

    Jin, Jiu-Zhen; Zhu, Yuanqi; Warner, Dennis; Ding, Jixiang

    2016-08-01

    During mouse gastrulation, the primitive streak is formed on the posterior side of the embryo. Cells migrate out of the primitive streak to form the future mesoderm and endoderm. Fate mapping studies revealed a group of cell migrate through the proximal end of the primitive streak and give rise to the extraembryonic mesoderm tissues such as the yolk sac blood islands and allantois. However, it is not clear whether the formation of a morphological primitive streak is required for the development of these extraembryonic mesodermal tissues. Loss of the Cripto gene in mice dramatically reduces, but does not completely abolish, Nodal activity leading to the absence of a morphological primitive streak. However, embryonic erythrocytes are still formed and assembled into the blood islands. In addition, Cripto mutant embryos form allantoic buds. However, Drap1 mutant embryos have excessive Nodal activity in the epiblast cells before gastrulation and form an expanded primitive streak, but no yolk sac blood islands or allantoic bud formation. Lefty2 embryos also have elevated levels of Nodal activity in the primitive streak during gastrulation, and undergo normal blood island and allantois formation. We therefore speculate that low level of Nodal activity disrupts the formation of morphological primitive streak on the posterior side, but still allows the formation of primitive streak cells on the proximal side, which give rise to the extraembryonic mesodermal tissues formation. Excessive Nodal activity in the epiblast at pre-gastrulation stage, but not in the primitive streak cells during gastrulation, disrupts extraembryonic mesoderm development. PMID:27273137

  11. Solitary pulmonary metastasis from lung cancer harboring EML4-ALK after a 15-year disease-free interval.

    PubMed

    Tomizawa, Kenji; Ito, Simon; Suda, Kenichi; Fukui, Takayuki; Usami, Noriyasu; Hatooka, Shunzo; Kuwano, Hiroyuki; Yatabe, Yasushi; Mitsudomi, Tetsuya

    2013-04-01

    It is often difficult to differentiate metachronous primary lung cancers from local pulmonary recurrences when the histopathological findings are similar. A 43-year-old man underwent right upper lobectomy with lymph node dissection for primary lung adenocarcinoma (p-T2aN0M0, stage IB). Fifteen years later, he developed a lung nodule in his right middle lobe. The tumor was preoperatively thought to be a metachronous second primary lung adenocarcinoma, and was surgically resected. Histopathological findings for both tumors were of poorly differentiated adenocarcinoma with mucus production. Both tumors also harbored the EML4 (echinoderm microtubule-associated protein-like 4)-ALK (anaplastic lymphoma kinase) fusion gene (variant 3a+b). Based on this molecular finding, the pulmonary nodule was considered to be a recurrence after very long latent period. PMID:23279872

  12. Numerical study of the generation of metachronal waves in layers of beating cilia using a Lattice Boltzmann method. Application to the generation of fluid motion at the cell scale.

    NASA Astrophysics Data System (ADS)

    Mercat, Jean; Li, Zhe; Favier, Julien; D'Ortona, Umberto; Poncet, Sebastien; M2P2 Team

    2015-11-01

    Cilia are flexible elongated whip-like structures which are ubiquitous in nature. Indeed, the collective beating of arrays of thousands of cilia can transport fluid (mucus in airways) or induce locomotion on microorganisms swimming in water. From a purely hydrodynamical point of view, cilia do not beat randomly, but rather generate typical metachronal waves at their surface. In this work, we study the self-organization of the beating motion of large fields of beating cilia in a two-component flow environment, made of water and a much more viscous fluid. The numerical solver is based on an immersed boundary-lattice Boltzmann method in the context of single- and multi-component fluid flows, and in the presence of fixed or moving solid boundaries. The solver has been validated in previous studies. Various parameters are varied, such as length, spacing and phase motion of individual cilia. The energetic performances of different kind of waves are studied to understand the emergence of antiplectic metachronal waves, commonly observed in nature. It is found that a purely hydrodynamical coupling between fluid and cilia can explain the onset of metachronal waves in cilia arrays, and that these waves are maximizing a performance ratio.

  13. Agile Science Operations: A New Approach for Primitive Exploration Bodies

    NASA Technical Reports Server (NTRS)

    Chien, Steve A.; Thompson, David R.; Castillo-Rogez, Julie C.; Doyle, Richard; Estlin, Tara; Mclaren, David

    2012-01-01

    Primitive body exploration missions such as potential Comet Surface Sample Return or Trojan Tour and Rendezvous would challenge traditional operations practices. Earth-based observations would provide only basic understanding before arrival and many science goals would be defined during the initial rendezvous. It could be necessary to revise trajectories and observation plans to quickly characterize the target for safe, effective observations. Detection of outgassing activity and monitoring of comet surface activity are even more time constrained, with events occurring faster than round-trip light time. "Agile science operations" address these challenges with contingency plans that recognize the intrinsic uncertainty in the operating environment and science objectives. Planning for multiple alternatives can significantly improve the time required to repair and validate spacecraft command sequences. When appropriate, time-critical decisions can be automated and shifted to the spacecraft for immediate access to instrument data. Mirrored planning systems on both sides of the light-time gap permit transfer of authority back and forth as needed. We survey relevant science objectives, identifying time bottlenecks and the techniques that could be used to speed missions' reaction to new science data. Finally, we discuss the results of a trade study simulating agile observations during flyby and comet rendezvous scenarios. These experiments quantify instrument coverage of key surface features as a function of planning turnaround time. Careful application of agile operations techniques can play a significant role in realizing the Decadal Survey plan for primitive body exploration

  14. High water content in primitive continental flood basalts

    PubMed Central

    Xia, Qun-Ke; Bi, Yao; Li, Pei; Tian, Wei; Wei, Xun; Chen, Han-Lin

    2016-01-01

    As the main constituent of large igneous provinces, the generation of continental flood basalts (CFB) that are characterized by huge eruption volume (>105 km3) within short time span (<1–3 Ma) is in principle caused by an abnormally high temperature, extended decompression, a certain amount of mafic source rocks (e.g., pyroxenite), or an elevated H2O content in the mantle source. These four factors are not mutually exclusive. There are growing evidences for high temperature, decompression and mafic source rocks, albeit with hot debate. However, there is currently no convincing evidence of high water content in the source of CFB. We retrieved the initial H2O content of the primitive CFB in the early Permian Tarim large igneous province (NW China), using the H2O content of ten early-formed clinopyroxene (cpx) crystals that recorded the composition of the primitive Tarim basaltic melts and the partition coefficient of H2O between cpx and basaltic melt. The arc-like H2O content (4.82 ± 1.00 wt.%) provides the first clear evidence that H2O plays an important role in the generation of CFB. PMID:27143196

  15. High water content in primitive continental flood basalts

    NASA Astrophysics Data System (ADS)

    Xia, Qun-Ke; Bi, Yao; Li, Pei; Tian, Wei; Wei, Xun; Chen, Han-Lin

    2016-05-01

    As the main constituent of large igneous provinces, the generation of continental flood basalts (CFB) that are characterized by huge eruption volume (>105 km3) within short time span (<1–3 Ma) is in principle caused by an abnormally high temperature, extended decompression, a certain amount of mafic source rocks (e.g., pyroxenite), or an elevated H2O content in the mantle source. These four factors are not mutually exclusive. There are growing evidences for high temperature, decompression and mafic source rocks, albeit with hot debate. However, there is currently no convincing evidence of high water content in the source of CFB. We retrieved the initial H2O content of the primitive CFB in the early Permian Tarim large igneous province (NW China), using the H2O content of ten early-formed clinopyroxene (cpx) crystals that recorded the composition of the primitive Tarim basaltic melts and the partition coefficient of H2O between cpx and basaltic melt. The arc-like H2O content (4.82 ± 1.00 wt.%) provides the first clear evidence that H2O plays an important role in the generation of CFB.

  16. High water content in primitive continental flood basalts.

    PubMed

    Xia, Qun-Ke; Bi, Yao; Li, Pei; Tian, Wei; Wei, Xun; Chen, Han-Lin

    2016-01-01

    As the main constituent of large igneous provinces, the generation of continental flood basalts (CFB) that are characterized by huge eruption volume (>10(5) km(3)) within short time span (<1-3 Ma) is in principle caused by an abnormally high temperature, extended decompression, a certain amount of mafic source rocks (e.g., pyroxenite), or an elevated H2O content in the mantle source. These four factors are not mutually exclusive. There are growing evidences for high temperature, decompression and mafic source rocks, albeit with hot debate. However, there is currently no convincing evidence of high water content in the source of CFB. We retrieved the initial H2O content of the primitive CFB in the early Permian Tarim large igneous province (NW China), using the H2O content of ten early-formed clinopyroxene (cpx) crystals that recorded the composition of the primitive Tarim basaltic melts and the partition coefficient of H2O between cpx and basaltic melt. The arc-like H2O content (4.82 ± 1.00 wt.%) provides the first clear evidence that H2O plays an important role in the generation of CFB. PMID:27143196

  17. Primitive wing feather arrangement in Archaeopteryx lithographica and Anchiornis huxleyi.

    PubMed

    Longrich, Nicholas R; Vinther, Jakob; Meng, Qingjin; Li, Quangguo; Russell, Anthony P

    2012-12-01

    In modern birds (Neornithes), the wing is composed of a layer of long, asymmetrical flight feathers overlain by short covert feathers. It has generally been assumed that wing feathers in the Jurassic bird Archaeopteryx and Cretaceous feathered dinosaurs had the same arrangement. Here, we redescribe the wings of the archaic bird Archaeopteryx lithographica and the dinosaur Anchiornis huxleyi and show that their wings differ from those of Neornithes in being composed of multiple layers of feathers. In Archaeopteryx, primaries are overlapped by long dorsal and ventral coverts. Anchiornis has a similar configuration but is more primitive in having short, slender, symmetrical remiges. Archaeopteryx and Anchiornis therefore appear to represent early experiments in the evolution of the wing. This primitive configuration has important functional implications: although the slender feather shafts of Archaeopteryx and Anchiornis make individual feathers weak, layering of the wing feathers may have produced a strong airfoil. Furthermore, the layered arrangement may have prevented the feathers from forming a slotted tip or separating to reduce drag on the upstroke. The wings of early birds therefore may have lacked the range of functions seen in Neornithes, limiting their flight ability. PMID:23177480

  18. Primitive soft-bodied cephalopods from the Cambrian.

    PubMed

    Smith, Martin R; Caron, Jean-Bernard

    2010-05-27

    The exquisite preservation of soft-bodied animals in Burgess Shale-type deposits provides important clues into the early evolution of body plans that emerged during the Cambrian explosion. Until now, such deposits have remained silent regarding the early evolution of extant molluscan lineages-in particular the cephalopods. Nautiloids, traditionally considered basal within the cephalopods, are generally depicted as evolving from a creeping Cambrian ancestor whose dorsal shell afforded protection and buoyancy. Although nautiloid-like shells occur from the Late Cambrian onwards, the fossil record provides little constraint on this model, or indeed on the early evolution of cephalopods. Here, we reinterpret the problematic Middle Cambrian animal Nectocaris pteryx as a primitive (that is, stem-group), non-mineralized cephalopod, based on new material from the Burgess Shale. Together with Nectocaris, the problematic Lower Cambrian taxa Petalilium and (probably) Vetustovermis form a distinctive clade, Nectocarididae, characterized by an open axial cavity with paired gills, wide lateral fins, a single pair of long, prehensile tentacles, a pair of non-faceted eyes on short stalks, and a large, flexible anterior funnel. This clade extends the cephalopods' fossil record by over 30 million years, and indicates that primitive cephalopods lacked a mineralized shell, were hyperbenthic, and were presumably carnivorous. The presence of a funnel suggests that jet propulsion evolved in cephalopods before the acquisition of a shell. The explosive diversification of mineralized cephalopods in the Ordovician may have an understated Cambrian 'fuse'. PMID:20505727

  19. C/EBPalpha initiates primitive myelopoiesis in pluripotent embryonic cells.

    PubMed

    Chen, Yaoyao; Costa, Ricardo M B; Love, Nick R; Soto, Ximena; Roth, Martin; Paredes, Roberto; Amaya, Enrique

    2009-07-01

    The molecular mechanisms that underlie the development of primitive myeloid cells in vertebrate embryos are not well understood. Here we characterize the role of cebpa during primitive myeloid cell development in Xenopus. We show that cebpa is one of the first known hematopoietic genes expressed in the embryo. Loss- and gain-of-function studies show that it is both necessary and sufficient for the development of functional myeloid cells. In addition, we show that cebpa misexpression leads to the precocious induction of myeloid cell markers in pluripotent prospective ectodermal cells, without the cells transitioning through a general mesodermal state. Finally, we use live imaging to show that cebpa-expressing cells exhibit many attributes of terminally differentiated myeloid cells, such as highly active migratory behavior, the ability to quickly and efficiently migrate toward wounds and phagocytose bacteria, and the ability to enter the circulation. Thus, C/EPBalpha is the first known single factor capable of initiating an entire myelopoiesis pathway in pluripotent cells in the embryo. PMID:19420355

  20. Inorganic chemistry of O2 in a dense primitive atmosphere

    PubMed

    Rosenqvist, J; Chassefière, E

    1995-01-01

    A simple steady-state photochemical model is developed in order to determine typical molecular oxygen concentrations for a comprehensive range of primitive abiotic atmospheres. Carbon dioxide is assumed to be the dominant constituent in these atmospheres since CO2 photodissociation may potentially result in the enhancement of the O2 partial pressure. The respective effects of the H2O content, temperature, eddy diffusion coefficient and UV flux on the results are investigated. It is shown that for any pressure at the surface, the partial pressure of molecular oxygen does not exceed 10 mbar. The peculiar case of a runaway greenhouse which has possibly taken place on Venus is qualitatively envisaged. Although O2 is basically absent in the present Venus atmosphere, a transient presence in a primitive stage cannot be ruled out. Possible mechanisms for O2 removal in such an atmosphere are reviewed. At the present stage, we think that the detection of large O2 amounts would be at least a good clue for the presence of life on an extrasolar planet. PMID:11538435

  1. Synthesis of phosphatidylcholine under possible primitive earth conditions

    NASA Technical Reports Server (NTRS)

    Rao, M.; Eichberg, J.; Oro, J.

    1982-01-01

    Using a primitive earth evaporating pond model, the synthesis of phosphatidylcholine was accomplished when a reaction mixture of choline chloride and disodium phosphatidate, in the presence of cyanamide and traces of acid, was evaporated and heated at temperatures ranging from 25 to 100 C for 7 hours. Optimum yields of about 15% were obtained at 80 C. Phosphatidylcholine was identified by chromatographic, chemical and enzymatic degradation methods. On enzymatic hydrolysis with phospholipase A2 and phospholipase C, lysophosphatidylcholine and phosphorylcholine were formed, respectively. Alkaline hydrolysis gave glycerophosphorylcholine. The synthesis of phosphatidylcholine as the major compound was accompanied by the formation of lysophosphatidylcholine in smaller amounts. Cyanamide was found to be essential for the formation of phosphatidylcholine, and only traces of HCl, of the order of that required to convert the disodium phosphatidate to free phosphatidic acid were found necessary for the synthesis. This work suggests that phosphatidylcholine, which is an essential component of most biological membranes, could have been synthesized on the primitive earth.

  2. Erythropoietin critically regulates the terminal maturation of murine and human primitive erythroblasts.

    PubMed

    Malik, Jeffrey; Kim, Ah Ram; Tyre, Kaitlin A; Cherukuri, Anjuli R; Palis, James

    2013-11-01

    Primitive erythroid cells, the first red blood cells produced in the mammalian embryo, are necessary for embryonic survival. Erythropoietin and its receptor EpoR, are absolutely required for survival of late-stage definitive erythroid progenitors in the fetal liver and adult bone marrow. Epo- and Epor-null mice die at E13.5 with a lack of definitive erythrocytes. However, the persistence of circulating primitive erythroblasts raises questions about the role of erythropoietin/EpoR in primitive erythropoiesis. Using Epor-null mice and a novel primitive erythroid 2-step culture we found that erythropoietin is not necessary for specification of primitive erythroid progenitors. However, Epor-null embryos develop a progressive, profound anemia by E12.5 as primitive erythroblasts mature as a synchronous cohort. This anemia results from reduced primitive erythroblast proliferation associated with increased p27 expression, from advanced cellular maturation, and from markedly elevated rates of apoptosis associated with an imbalance in pro- and anti-apoptotic gene expression. Both mouse and human primitive erythroblasts cultured without erythropoietin also undergo accelerated maturation and apoptosis at later stages of maturation. We conclude that erythropoietin plays an evolutionarily conserved role in promoting the proliferation, survival, and appropriate timing of terminal maturation of primitive erythroid precursors. PMID:23894012

  3. Factors Associated With the Performance of Extended Colonic Resection vs. Segmental Resection in Early-Onset Colorectal Cancer: A Population-Based Study

    PubMed Central

    Karlitz, Jordan J; Sherrill, Meredith R; DiGiacomo, Daniel V; Hsieh, Mei-chin; Schmidt, Beth; Wu, Xiao-Cheng; Chen, Vivien W

    2016-01-01

    OBJECTIVES: Early-onset colorectal cancer (CRC) incidence rates are rising. This group is susceptible to heritable conditions (i.e., Lynch syndrome (LS)) and inflammatory bowel disease (IBD) with high metachronous CRC rates after segmental resection. Hence, extended colonic resection (ECR) is often performed and considered generally in young patients. As there are no population-based studies analyzing resection extent in early-onset CRC, we used CDC Comparative Effectiveness Research (CER) data to assess state-wide operative practices. METHODS: Using CER and Louisiana Tumor Registry data, all CRC patients aged ≤50 years, diagnosed in Louisiana in 2011, who underwent surgery in 2011–2012 were retrospectively analyzed. Prevalence of, and the factors associated with operation type (ECR including subtotal/total/proctocolectomy vs. segmental resection) were evaluated. RESULTS: Of 2,427 CRC patients, 274 were aged ≤50 years. In all, 234 underwent surgery at 53 unique facilities and 6.8% underwent ECR. Statistically significant ECR-associated factors included age ≤45 years, polyposis, synchronous/metachronous LS-associated cancers, and IBD. Abnormal microsatellite instability (MSI) was not ECR-associated. ECR was not performed in sporadic CRC. CONCLUSIONS: ECR is performed in the setting of clinically obvious associated high-risk features (polyposis, IBD, synchronous/metachronous cancers) but not in isolated/sporadic CRC. However, attention must be paid to patients with seemingly lower risk characteristics (isolated CRC, no polyposis), as LS can still be present. In addition, the presumed sporadic group requires further study as metachronous CRC risk in early-onset sporadic CRC has not been well-defined, and some may harbor undefined/undiagnosed hereditary conditions. Abnormal MSI (LS risk) is not associated with ECR; abnormal MSI results often return postoperatively after segmental resection has already occurred, which is a contributing factor. PMID:27077958

  4. Cancer

    MedlinePlus

    ... your life Being exposed to chemicals that can cause cancer Being at risk for skin cancer Depending on ... than nonsmokers. Other forms of tobacco can also cause cancer, such as cigars, chewing tobacco and snuff. If ...

  5. Pediatric primitive intraneural synovial sarcoma of L-5 nerve root.

    PubMed

    Peia, Francesco; Gessi, Marco; Collini, Paola; Ferrari, Andrea; Erbetta, Alessandra; Valentini, Laura G

    2013-04-01

    Primitive intraneural synovial sarcomas are rare in children. The authors report the case of a 7-year-old girl affected by intraneural synovial sarcoma of a lumbar nerve root, the first such lesion in this location described in a child. The lesion mimicked a schwannoma clinically and radiologically. There was long-lasting leg pain in a radicular distribution, and a well-demarcated intraneural tumor was seen on MRI. On this basis, the first resection was conservative. However, histological examination documented a classic biphasic synovial sarcoma, which was confirmed by immunohistochemistry. After radical resection and adjuvant treatment, complete disease control was achieved and verified at 5-year follow-up. This case strongly suggests that early diagnosis and a multidisciplinary approach to this unusual spinal lesion are essential to achieving a better prognosis. PMID:23414131

  6. Cerebellopontine angle primitive neuroectodermal tumor mimicking trigeminal schwannoma

    PubMed Central

    Khan, Saad Akhtar; Ujjan, Badar Uddin; Salim, Adnan; Shamim, Shahzad

    2016-01-01

    Background: Primitive neuroectodermal tumors (PNETs) comprise a group of aggressive, poorly differentiated embryonal tumors occurring in central nervous system as well as in peripheral locations. Primary cerebellopontine angle (CPA) PNET is an extremely rare entity. It is important to have knowledge of this pathology and to be able to differentiate it from other commonly occurring CPA tumors, such as vestibular and trigeminal schwannomas. This distinction is essential because of the difference in the overall treatment plan and prognosis. Case Description: This report describes a case of a young male presenting with diplopia and numbness of face; magnetic resonance imaging showed a CPA mass. With a provisional diagnosis of trigeminal schwannoma, the patient underwent surgery. Histopathology provided a diagnosis of PNET. Conclusion: We discuss the importance of recognizing this rare condition and how this entity differs from the commonly occurring tumors. PMID:26862446

  7. Primitive Neuroectodermal Tumor of the Stomach: A Case Report.

    PubMed

    Song, Min Jeong; An, Soyeon; Lee, Seung Soo; Kim, Beom Su; Kim, Jihun

    2016-09-01

    Ewing sarcoma/primitive neuroectodermal tumor (ES/PNET) is a highly aggressive small round cell tumor that mainly occurs in the bone or soft tissue of children or young adults but is extremely rare in the stomach. A 55-year-old man presented with melena and anemia. On endoscopy, an ulcerofungating mass was observed in the high body and total gastrectomy was performed. Histologically, the mass consisted of small round cells with scanty cytoplasm and inconspicuous nucleoli. They often formed perivascular pseudorosettes and multinucleated giant cells were frequently observed. The tumor cells strongly expressed CD99, FLI1, and chromogranin and weakly expressed synaptophysin and CD56. EWS-FLI1 fusion transcript was confirmed by reverse transcription-polymerase chain reaction. ES/PNET is frequently misdiagnosed because of its similarity with small cell carcinoma. Although gastric ES/PNET is very rare, it should be included in differential diagnoses of small round cell tumor in the stomach. PMID:27006299

  8. A chimeric prokaryotic ancestry of mitochondria and primitive eukaryotes.

    PubMed

    Karlin, S; Brocchieri, L; Mrázek, J; Campbell, A M; Spormann, A M

    1999-08-01

    We provide data and analysis to support the hypothesis that the ancestor of animal mitochondria (Mt) and many primitive amitochondrial (a-Mt) eukaryotes was a fusion microbe composed of a Clostridium-like eubacterium and a Sulfolobus-like archaebacterium. The analysis is based on several observations: (i) The genome signatures (dinucleotide relative abundance values) of Clostridium and Sulfolobus are compatible (sufficiently similar) and each has significantly more similarity in genome signatures with animal Mt sequences than do all other available prokaryotes. That stable fusions may require compatibility in genome signatures is suggested by the compatibility of plasmids and hosts. (ii) The expanded energy metabolism of the fusion organism was strongly selective for cementing such a fusion. (iii) The molecular apparatus of endospore formation in Clostridium serves as raw material for the development of the nucleus and cytoplasm of the eukaryotic cell. PMID:10430918

  9. [Primitive neuroectodermal tumor of kidney : a case report].

    PubMed

    Tsutsumi, Naofumi; Sumiyoshi, Takayuki; Okamura, Motohiro; Nakashima, Yoshiharu; Iwamura, Hiroshi; Mitsumori, Kenji; Nishimura, Kazuo; Shintaku, Masayuki; Koyama, Takashi; Matsui, Yusuke; Watanabe, Mitsumasa

    2013-06-01

    A 16-year-old man was referred to our hospital for asymptomatic gross hematuria. The findings of abdominal ultrasonography were normal. A month later, gross hematuria disappeared, and he was not followed after that. A month later, the patient was taken to our hospital in an ambulance for severe back pain and recurring gross hematuria. Computed tomography (CT) revealed a large right renal tumor with tumor thrombus penetrating inside the inferior vena cava. The patient underwent radical nephrectomy and embolectomy. The pathological diagnosis of the tumor was diagnosed as primitive neuroectodermal tumor (PNET) of kidney by immunostaining and gene analysis. We started adjuvant chemotherapy soon after the operation. However, at 10 months after, multiple pulmonary metastases were detected. The patient was treated with salvage chemotherapy, surgery and irradiation therapy as combined modality therapy. Nevertheless, he died 18 months after the diagnosis. PMID:23827869

  10. Evolution of lung breathing from a lungless primitive vertebrate.

    PubMed

    Hoffman, M; Taylor, B E; Harris, M B

    2016-04-01

    Air breathing was critical to the terrestrial radiation and evolution of tetrapods and arose in fish. The vertebrate lung originated from a progenitor structure present in primitive boney fish. The origin of the neural substrates, which are sensitive to metabolically produced CO2 and which rhythmically activate respiratory muscles to match lung ventilation to metabolic demand, is enigmatic. We have found that a distinct periodic centrally generated rhythm, described as "cough" and occurring in lamprey in vivo and in vitro, is modulated by central sensitivity to CO2. This suggests that elements critical for the evolution of breathing in tetrapods, were present in the most basal vertebrate ancestors prior to the evolution of the lung. We propose that the evolution of breathing in all vertebrates occurred through exaptations derived from these critical basal elements. PMID:26476056

  11. Chemical effects of large impacts on the earth's primitive atmosphere

    NASA Technical Reports Server (NTRS)

    Fegley, B., Jr.; Prinn, R. G.; Hartman, H.; Watkins, G. H.

    1986-01-01

    The production of HCN and H2CO by large impacts on the earth's primitive atmosphere is modelled using thermochemical equilibrium and chemical kinetic calculations of the composition of shocked air parcels for a wide range of temperatures, pressures, and initial compositions. For atmospheres with C/O of one or more, the results suggest that bolide impacts cause HCN volume mixing ratios of approximately 10 to the -3rd to -5th in the impact region and global average ratios of 10 to the -5th to the -12th. The corresponding H2CO mixing ratios in the impact region are 10 to the -7th to -9th; nonglobal mixing can occur, however, as H2CO is rapidly destroyed or rained out of the atmosphere within days to hours. Rainout to the oceans of 3-15 percent of the HCN produced can provide 3-14 x 10 to the 11th mol HCN per year.

  12. A simple physical mechanism enables homeostasis in primitive cells

    NASA Astrophysics Data System (ADS)

    Engelhart, Aaron E.; Adamala, Katarzyna P.; Szostak, Jack W.

    2016-05-01

    The emergence of homeostatic mechanisms that enable maintenance of an intracellular steady state during growth was critical to the advent of cellular life. Here, we show that concentration-dependent reversible binding of short oligonucleotides, of both specific and random sequence, can modulate ribozyme activity. In both cases, catalysis is inhibited at high concentrations, and dilution activates the ribozyme via inhibitor dissociation, thus maintaining near-constant ribozyme specific activity throughout protocell growth. To mimic the result of RNA synthesis within non-growing protocells, we co-encapsulated high concentrations of ribozyme and oligonucleotides within fatty acid vesicles, and ribozyme activity was inhibited. Following vesicle growth, the resulting internal dilution produced ribozyme activation. This simple physical system enables a primitive homeostatic behaviour: the maintenance of constant ribozyme activity per unit volume during protocell volume changes. We suggest that such systems, wherein short oligonucleotides reversibly inhibit functional RNAs, could have preceded sophisticated modern RNA regulatory mechanisms, such as those involving miRNAs.

  13. The memorability and discriminability of primitive perceptual units in infancy.

    PubMed

    Adler, S A; Rovee-Collier, C

    1994-02-01

    Three-month-olds were operantly trained to kick to move a block mobile that displayed a horizontal and a vertical line ("textons") arranged as L, T, or + on each side. Delayed recognition was tested either 0, 1, 3, 5, 7, or 9 days later with either the same or a different display. Infants failed to discriminate between Ls and Ts after delays longer than 1 hr but discriminated both from +s, which contains an additional texton (the line crossing), after delays as long as 7 days but not 9. Also, they remembered +s longer than Ls and Ts. These data indicate that the same primitive perceptual units that mediate adult texture segregation are differentially discriminated and differentially memorable in early infancy. PMID:8303829

  14. Primitive layered gabbros from fast-spreading lower oceanic crust.

    PubMed

    Gillis, Kathryn M; Snow, Jonathan E; Klaus, Adam; Abe, Natsue; Adrião, Alden B; Akizawa, Norikatsu; Ceuleneer, Georges; Cheadle, Michael J; Faak, Kathrin; Falloon, Trevor J; Friedman, Sarah A; Godard, Marguerite; Guerin, Gilles; Harigane, Yumiko; Horst, Andrew J; Hoshide, Takashi; Ildefonse, Benoit; Jean, Marlon M; John, Barbara E; Koepke, Juergen; Machi, Sumiaki; Maeda, Jinichiro; Marks, Naomi E; McCaig, Andrew M; Meyer, Romain; Morris, Antony; Nozaka, Toshio; Python, Marie; Saha, Abhishek; Wintsch, Robert P

    2014-01-01

    Three-quarters of the oceanic crust formed at fast-spreading ridges is composed of plutonic rocks whose mineral assemblages, textures and compositions record the history of melt transport and crystallization between the mantle and the sea floor. Despite the importance of these rocks, sampling them in situ is extremely challenging owing to the overlying dykes and lavas. This means that models for understanding the formation of the lower crust are based largely on geophysical studies and ancient analogues (ophiolites) that did not form at typical mid-ocean ridges. Here we describe cored intervals of primitive, modally layered gabbroic rocks from the lower plutonic crust formed at a fast-spreading ridge, sampled by the Integrated Ocean Drilling Program at the Hess Deep rift. Centimetre-scale, modally layered rocks, some of which have a strong layering-parallel foliation, confirm a long-held belief that such rocks are a key constituent of the lower oceanic crust formed at fast-spreading ridges. Geochemical analysis of these primitive lower plutonic rocks--in combination with previous geochemical data for shallow-level plutonic rocks, sheeted dykes and lavas--provides the most completely constrained estimate of the bulk composition of fast-spreading oceanic crust so far. Simple crystallization models using this bulk crustal composition as the parental melt accurately predict the bulk composition of both the lavas and the plutonic rocks. However, the recovered plutonic rocks show early crystallization of orthopyroxene, which is not predicted by current models of melt extraction from the mantle and mid-ocean-ridge basalt differentiation. The simplest explanation of this observation is that compositionally diverse melts are extracted from the mantle and partly crystallize before mixing to produce the more homogeneous magmas that erupt. PMID:24291793

  15. Ly(alpha) Photolysis in the Primitive Solar Nebula

    NASA Astrophysics Data System (ADS)

    Gladstone, G. Randall

    1998-01-01

    This is the final report for the third year of work on this project. Our proposal was to quantitatively investigate the importance of photochemistry in the solar nebula. In the generally accepted theory for the chemical evolution of the primitive solar nebula, Prinn and Fegley argued that photochemistry is unimportant, and that thermochemistry controls the relative abundances of molecular species throughout the planet-forming region. They provided useful estimates of the chemical energy available to the solar nebula from a variety of sources, and established that even the small photolysis rate due to starlight is more important than the photolysis rate from direct sunlight (although small, the UV flux from starlight could have processed a non-negligible fraction of the solar nebula. The reason for this is that the opacity of the disk was so large that direct sunlight could only penetrate to 0.1 AU or so, despite the expectation that the protosun, if comparable to a T-Tauri star, would be emitting up to 104 more H I Ly(alpha) photons than the current sun. We developed a Monte Carlo resonance fine radiative transfer code, capable of accurately calculating the radiation field of H I Ly(alpha), He I 584 A, and He II 304 A emissions throughout the nebula and the nearby interstellar medium in which it is embedded. We applied the code to two appropriate models of the primitive solar nebula. Our model provided the photolysis rates of various species over the entire surface layer of the nebula, and from this we evaluated the importance of UV photochemistry due to backscattered solar UV resonance line emissions on different parts of the nebula. The results discussed below were presented.

  16. Amylose primitive médiastinale d'aspect pseudotumoral

    PubMed Central

    Mahfoudhi, Madiha; Mamlouk, Habiba; Turki, Sami; Kheder, Adel

    2015-01-01

    L'amylose primitive médiastinale isolée est rare et de diagnostic difficile. Nous rapportons l'observation d'un patient âgé de 41 ans ayant présenté une dyspnée et des crachats hémoptoïques. A l'examen physique il n'avait pas d'hypotension orthostatique. Les aires ganglionnaires périphériques étaient libres. La tomodensitométrie thoracique a objectivé un magma d'adénopathies médiastinales réalisant une masse de 45 mm x 60 mm. L'examen anatomopathologique d'une biopsie ganglionnaire guidée par médiastinoscopie a conclut a une amylose médiastinale de type AL. Il n'avait pas d'autres localisations amyloïdes. Un myélome multiple a été éliminé. Le diagnostic d'amylose primitive médiastinale de type AL a été retenu. Le traitement s'est basé sur des cures de Melphalan-prednisone. La chirurgie était évitée vu le risque hémorragique élevé. L’évolution était marquée par l'amélioration de la dyspnée, la disparition de l'hémoptysie et la diminution de la taille de la masse ganglionnaire devenant 25 mm x 20 mm. PMID:26308913

  17. Formation of Primitive Bodies in the Protoplanetary Nebula

    NASA Technical Reports Server (NTRS)

    Cuzzi, Jeffrey N.

    2003-01-01

    We have developed a simple model of global transport of solids in the protoplanetary nebula, including radial drift of large particles and diffusion of small ones. The model has been applied to the formation and redistribution of the Ca-A1 rich refractory mineral inclusions (CAIs) found in primitive chondrites. These objects form at much higher temperatures, and appear to be 1-3 million years older than, the dominant (chondrule) components found in the same parent bodies. A widespread concern has been the retention of CAIs for this long against gas-drag-induced radial drift into the sun. We show that outward radial diffusion in a weakly turbulent nebula can overwhelm inward drift, and prevent significant numbers of CAI-size particles from being lost into the sun for tines on the order of several Myr. An element of this model is rapid inward radial drift of boulder-sized primitive (carbon-rich) silicate material, more like Halley-dust than CI chondrites in the early days of the nebula. Thls process can enrich the abundance of silicate and carbon material in the inner nebula, and may provide possible explanations for both chemical and isotopic properties of CAIs. The predicted enhancement of CO relative to water might be of relevance to recent IR astronomical observations of CO in the inner disks of several actively accreting T Tauri stars. This process has applications to the transport and redistribution of volatiles in general. Depending on the rubble particle size distribution, rapid radial drift of boulder-sized solids can bring more material inwards across a condensation front, to evaporate, than can subsequently be removed by nebula advection or diffusion, until a strong local enhancement is produced which allows diffusive loss to balance the drifting source. Application of this process to enhancement of the abundance of water near the "ice line" will be discussed. Supported by the Origins of Solar Systems program.

  18. Ly(alpha) Photolysis in the Primitive Solar Nebula

    NASA Technical Reports Server (NTRS)

    Gladstone, G. Randall

    1998-01-01

    This is the final report for the third year of work on this project. Our proposal was to quantitatively investigate the importance of photochemistry in the solar nebula. In the generally accepted theory for the chemical evolution of the primitive solar nebula, Prinn and Fegley argued that photochemistry is unimportant, and that thermochemistry controls the relative abundances of molecular species throughout the planet-forming region. They provided useful estimates of the chemical energy available to the solar nebula from a variety of sources, and established that even the small photolysis rate due to starlight is more important than the photolysis rate from direct sunlight (although small, the UV flux from starlight could have processed a non-negligible fraction of the solar nebula. The reason for this is that the opacity of the disk was so large that direct sunlight could only penetrate to 0.1 AU or so, despite the expectation that the protosun, if comparable to a T-Tauri star, would be emitting up to 10(exp 4) more H I Ly(alpha) photons than the current sun. We developed a Monte Carlo resonance fine radiative transfer code, capable of accurately calculating the radiation field of H I Ly(alpha), He I 584 A, and He II 304 A emissions throughout the nebula and the nearby interstellar medium in which it is embedded. We applied the code to two appropriate models of the primitive solar nebula. Our model provided the photolysis rates of various species over the entire surface layer of the nebula, and from this we evaluated the importance of UV photochemistry due to backscattered solar UV resonance line emissions on different parts of the nebula. The results discussed below were presented.

  19. Structural systematics of Ge substitution in primitive pyroxenes

    NASA Astrophysics Data System (ADS)

    Welch, M. D.; Pawley, A. R.

    2016-03-01

    Pyroxenes of general stoichiometry Mg(Ge x Si1- x )O3 were encountered in attempts to synthesise Ge-substituted talcs at 0.2 GPa, 650-700 °C. Orthopyroxenes ( Pbca) of compositions x = 0.21, 0.30, and 0.34 were identified, and also a P21/ c clinopyroxene of composition x = 0.63, and C2/ c clinopyroxenes of compositions x = 0.91 and 1. End-member clinoenstatite MgSiO3- P21/ c synthesised at 16 GPa, 1300 °C and transformed from C2/ c was also included in the study. Crystal structure refinements using single-crystal XRD data showed that unit-cell parameters vary linearly with Si-Ge for the Pbca and P21/ c pyroxenes, both of which have two symmetrically non-equivalent tetrahedral chains. Refinement of Si-Ge occupancies at tetrahedral sites showed that the two chains of all primitive pyroxenes have very different compositions, with XGe( TB) ≫ XGe( TA). This difference arises from the greater flexibility of the B-chain to rotate in response to tetrahedral expansion due to increasing Ge content. The TA- M2 shared polyhedral edge imposes significant constraints on the flexibility of the A-chain, which can accommodate much less Ge than the B-chain. Linear trends of cell parameters, site occupancies, and structural parameters for the primitive pyroxenes, when extrapolated to published data for MgGeO3- Pbca, extend across the entire Si-Ge join.

  20. Metachronous Diffuse Large B-Cell Lymphoma and Kaposi Sarcoma of the Right Eyelid and Lacrimal Gland in a Patient with Granulomatous Common Variable Immunodeficiency

    PubMed Central

    Stenton, Sophie; Fernando, Malee; Currie, Zanna; Mudhar, Hardeep Singh

    2016-01-01

    Purpose To describe the ophthalmic and histopathological features of a female with granulomatous common variable immunodeficiency (CVID) who presented with upper-lid swelling. Procedures The patient underwent a biopsy of the right upper lid/palpebral lacrimal gland with imaging showing a left-sided nasopharyngeal mass, multiple lymph nodes within the mediastinum, bilateral lung nodules and a peritoneal nodule in the right iliac fossa. The right upper-lid swelling progressed and was subject to a second biopsy. Results The first right upper-lid biopsy revealed a diffuse large B-cell lymphoma (DLBCL), confirmed with clonal IgH gene rearrangement with PCR. The nasopharyngeal mass and lymph nodes were suspected clinically to be DLBCL. However, a biopsy of the nasopharyngeal mass showed Kaposi sarcoma (KS). The second biopsy of the right upper lid/palpebral lacrimal gland revealed KS with no evidence of DLBCL. Conclusion This is the first documentation of periocular/orbital metachronous DLBCL and KS in a patient with granulomatous CVID. We discuss the role of fluctuating immunity in CVID to explain the spontaneous regression of the DLBCL and the varying clinical picture. PMID:27239466

  1. Describing 3D Geometric Primitives Using the Gaussian Sphere and the Gaussian Accumulator

    NASA Astrophysics Data System (ADS)

    Toony, Zahra; Laurendeau, Denis; Gagné, Christian

    2015-12-01

    Most complex object models are composed of basic parts or primitives. Being able to decompose a complex 3D model into such basic primitives is an important step in reverse engineering. Even when an algorithm can segment a complex model into its primitives, a description technique is still needed in order to identify the type of each primitive. Most feature extraction methods fail to describe these basic primitives or need a trained classifier on a database of prepared data to perform this identification. In this paper, we propose a method that can describe basic primitives such as planes, cones, cylinders, spheres, and tori as well as partial models of the latter four primitives. To achieve this task, we combine the concept of Gaussian sphere to a new concept introduced in this paper: the Gaussian accumulator. Comparison of the results of our method with other feature extractors reveals that our approach can distinguish all of these primitives from each other including partial models. Our method was also tested on real scanned data with noise and missing areas. The results show that our method is able to distinguish all of these models as well.

  2. Hepatic metastases from gastric cancer: A surgical perspective.

    PubMed

    Tiberio, Guido Alberto Massimo; Roviello, Franco; Donini, Annibale; de Manzoni, Giovanni

    2015-11-01

    Management of patients with hepatic metastases as the sole metastatic site at diagnosis of gastric cancer (synchronous setting) or detected during follow-up (metachronous) is controversial. The prevailing attitude in these cases is passive, leading to surgical palliation and, possibly, to chemotherapy. Authors focused this editorial in order to promote a more pragmatic attitude. They stress the importance of recognizing the good candidates to curative surgery of both gastric cancer and hepatic metastases (synchronous setting) or hepatic disease alone (metachronous disease) from those who will not benefit from surgical therapy. In fact, in adequately selected subgroup of patients surgery, especially if integrated in multimodal therapeutic strategies, may achieve unexpected 5-year survival rates, ranging from 10% to 40%. The critical revision of the literature suggests that some simple clinical criteria exist that may be effectively employed in patients selection. These are mainly related to the gastric cancer (factors T, N, G) and to the extent of hepatic involvement (factor H). Upon these criteria it is possible to adequately select about 50% of cases. In the remaining 50% of cases a critical discussion on a case-by-case basis is recommended, considering that among these patients some potential long-survivors exist, that survival is strictly influenced by the ablation of the tumor bulk and by multimodality treatments including chemotherapy and that in expert institutions this kind of surgery is performed with very low mortality and morbidity rates. PMID:26556981

  3. Instructional explanations as an interface—the role of explanatory primitives

    NASA Astrophysics Data System (ADS)

    Kapon, Shulamit; diSessa, Andrea A.

    2010-10-01

    What makes an instructional sequence in physics meaningful to students? Why do some explanations seem more plausible than others? Why is it that an explanation can appear plausible to one student but not to another? We present a model that addresses these questions. Elaborating diSessa's (1993) concept of p-prims, we develop a model of explanatory primitives and argue that different individuals have different sets of explanatory primitives, or they assign different priorities to the same explanatory primitives. Individual differences in explanatory primitives can account for differences in reactions to an instructional explanation, and we present empirical data to support this claim. We then use the model to analyze Jim Minsrell's (1982) instructional sequence about normal forces to illustrate how an effective learning sequence addresses differences between individuals by evoking a rich set of explanatory primitives.

  4. Discovery of survival factor for primitive chronic myeloid leukemia cells using induced pluripotent stem cells.

    PubMed

    Suknuntha, Kran; Ishii, Yuki; Tao, Lihong; Hu, Kejin; McIntosh, Brian E; Yang, David; Swanson, Scott; Stewart, Ron; Wang, Jean Y J; Thomson, James; Slukvin, Igor

    2015-11-01

    A definitive cure for chronic myeloid leukemia (CML) requires identifying novel therapeutic targets to eradicate leukemia stem cells (LSCs). However, the rarity of LSCs within the primitive hematopoietic cell compartment remains a major limiting factor for their study in humans. Here we show that primitive hematopoietic cells with typical LSC features, including adhesion defect, increased long-term survival and proliferation, and innate resistance to tyrosine kinase inhibitor (TKI) imatinib, can be generated de novo from reprogrammed primary CML cells. Using CML iPSC-derived primitive leukemia cells, we discovered olfactomedin 4 (OLFM4) as a novel factor that contributes to survival and growth of somatic lin(-)CD34(+) cells from bone marrow of patients with CML in chronic phase, but not primitive hematopoietic cells from normal bone marrow. Overall, this study shows the feasibility and advantages of using reprogramming technology to develop strategies for targeting primitive leukemia cells. PMID:26561938

  5. Discovery of survival factor for primitive chronic myeloid leukemia cells using induced pluripotent stem cells

    PubMed Central

    Suknuntha, Kran; Ishii, Yuki; Tao, Lihong; Hu, Kejin; McIntosh, Brian E.; Yang, David; Swanson, Scott; Stewart, Ron; Wang, Jean Y.J.; Thomson, James; Slukvin, Igor

    2016-01-01

    A definitive cure for chronic myeloid leukemia (CML) requires identifying novel therapeutic targets to eradicate leukemia stem cells (LSCs). However, the rarity of LSCs within the primitive hematopoietic cell compartment remains a major limiting factor for their study in humans. Here we show that primitive hematopoietic cells with typical LSC features, including adhesion defect, increased long-term survival and proliferation, and innate resistance to tyrosine kinase inhibitor (TKI) imatinib, can be generated de novo from reprogrammed primary CML cells. Using CML iPSC-derived primitive leukemia cells, we discovered olfactomedin 4 (OLFM4) as a novel factor that contributes to survival and growth of somatic lin−CD34+ cells from bone marrow of patients with CML in chronic phase, but not primitive hematopoietic cells from normal bone marrow. Overall, this study shows the feasibility and advantages of using reprogramming technology to develop strategies for targeting primitive leukemia cells. PMID:26561938

  6. Tumeur neuroendocrine mammaire primitive: à propos d'un cas rare

    PubMed Central

    Laabadi, Kamilia; Jayi, Sofia; El Houari, Aziza; Tawfic, Harmouch; Bouguern, Hakima; Chaara, Hikmat; Melhouf, Abdilah; Amarti, Afaf

    2013-01-01

    Les carcinomes neuroendocrine primitifs du sein sont des tumeurs rares et représentent 2 à 5% des cancers mammaires. Nous rapportons le cas de localisation mammaire chez une patiente de 50 ans. Il s'agit d'une tumeur classée T4d N1 M0. La tumeur est suspecte radiologiquement. Une microbiopsie est réalisée. L’étude anatomopathologique et immunohistochimique est en faveur d'une tumeur neuroendocrine primitive du sein à grande cellules exprimant les récepteurs progestéroniques seulement. Vu le caractère inflammatoire de la tumeur une chimiothérapie est démarrée avec bonne évolution clinique. A la fin de la chimiothérapie on prévoit de réaliser une mastectomie avec curage axillaire et en fonction des résultats définitifs, une radiothérapie. Une hormonothérapie sera envisagée une 2ème étude immunohistochimique sur la pièce de mastectomie. Vu la rareté des carcinomes neuroendocrines mammaires primitifs, il n'existe pas de standard thérapeutique et le pronostic demeure difficile à déterminer. PMID:24772221

  7. DNA demethylation in normal colon tissue predicts predisposition to multiple cancers.

    PubMed

    Kamiyama, H; Suzuki, K; Maeda, T; Koizumi, K; Miyaki, Y; Okada, S; Kawamura, Y J; Samuelsson, J K; Alonso, S; Konishi, F; Perucho, M

    2012-11-29

    Some colon cancer (CC) patients present synchronous cancers at diagnosis and others develop metachronous neoplasms, but the risk factors are unclear for non-hereditary CC. We showed previously that global DNA demethylation increased with aging and correlated with genomic damage in CC, and we show now that preferentially associates to CCs with wild-type p53. This study aimed to elucidate the extent of DNA hypomethylation in patients with single and multiple CC, its relationship with aging, and its potential as predictive tool. We compared by real-time methylation-specific PCR the relative demethylation level (RDL) of long interspersed nucleotide element-1 (LINE-1) sequences in matched cancer tissues and non-cancerous colonic mucosa (NCM) from patients with single and multiple right-sided CCs. Although no RDL difference was found in NCM from single CC patients and healthy volunteers (P=0.5), there was more demethylation (higher RDL) in NCM from synchronous cancer patients (P=1.1 × 10(-5)) multiple CCs also were more demethylated than single CCs (P=0.0014). High NCM demethylation was predictive for metachronous neoplasms (P=0.003). In multivariate logistic regression analyses RDL was the only independent predictor for metachronous (P=0.02) and multiple (P=4.9 × 10(-5)) tumors. The higher LINE-1 demethylation in NCM from patients with multiple (synchronous and metachronous) tumors (P=9.6 × 10(-7)) was also very significant in patients with tumors without (P=3.8 × 10(-6)), but not with (P=0.16) microsatellite instability. NCM demethylation increased with aging in patients with single tumors, but decreased in those with multiple tumors. Moreover, the demethylation difference between patients with single vs multiple tumors appeared higher in younger (P=3.6 × 10(-4)) than in older (P=0.0016) patients. These results predict that LINE-1 hypomethylation in NCM can be used as an epigenetic predictive biomarker for multiple CC risk. The stronger association of

  8. [Prevention of gastric cancer by Helicobacter pylori eradication].

    PubMed

    Asaka, Masahiro

    2009-08-01

    Though the relationship between Helicobacter pylori (H. pylori) infection and gastric cancer has been proved in epidemiological studies and animal experiments, the prophylactic effect of H. pylori eradication is controversial in human studies. A large-scale clinical study performed by the JAPANGAST Study Group has confirmed that the eradication of H. pylori undoubtedly decreases the incidence of metachronous gastric cancer after endoscopic mucosal resection as published in The Lancet (372: 392-397, 2008). This study shows gastric cancer is a kind of infectious disease, not a lifestyle-related disease, and can thus be averted by preventing or curing the infection, suggesting the eradication of H. pylori might be indicated to prevent development of gastric cancers. PMID:19692758

  9. NEOWISE: The distribution of the large primitive asteroids

    NASA Astrophysics Data System (ADS)

    Grav, T.; Mainzer, A.; Bauer, J.; Masiero, J.; Nugent, C.; Stevenson, R.; Sonnett, S.

    2014-07-01

    The Wide-field Infrared Survey Explorer (WISE) is a NASA Medium-class Explorer mission that surveyed the entire sky in four infrared wavelengths at 3.4, 4.6, 12, and 22 microns (denoted W1, W2, W3, and W4, respectively) [1,2]. The solar-system specific portion of the WISE project, known as NEOWISE, collected more than 2 million observations of more than 158,000 asteroids, including near-Earth objects, main-belt asteroids, comets, Hildas, Jovian Trojans, Centaurs, and scattered-disk objects [3]. The methods used for data extraction and thermal modeling have been extensively detailed in [3--6]. The resulting physical properties have been reported in a series of papers [3--13]. In [6] and [9], it was shown that the visible albedo in the V band and the near-infrared albedo in the W1 and W2 bands can be used to taxonomically classify a significant number of the largest members of the Hilda and Jovian Trojan populations (see Figure 1). This allows for the study of the distribution of primitive asteroids in the region between the main asteroid and the giant planets, down to sizes where the populations are completely sampled. Figure 2 shows that for the Hilda population, where the sample is observationally complete to about 40 km, the C/P types dominated over the D types at the larger sizes. However, for the smaller sizes, the D types become significantly more numerous. For the Jovian Trojan population, for which the sample is observationally complete to about 50 km, the D types are slightly more numerous at the largest sizes. As smaller sizes are included, the D types become more dominant, with more than 80 % of the objects larger than 50 km having this taxonomic type. We have now extended the study to include thermal fits and taxonomic classification of the outer main belt, Cybeles, irregular satellites of Jupiter and Saturn, and the Centaur population [13], and will present the results of this work. The distribution of primitive asteroids in the different populations

  10. Polycyclic aromatic hydrocarbons: primitive pigment systems in the prebiotic environment.

    PubMed

    Deamer, D W

    1992-01-01

    Polycyclic aromatic hydrocarbons (PAH) in the form of polymerized derivatives represent over 90% of the organic material of carbonaceous chondrites. It now appears likely that there was substantial survival of the organic content of meteoritic and cometary infall during late accretion, so that PAH would presumably be major components of the organic inventory present on the prebiotic Earth. An important question relative to chemical evolution and energy transduction is the nature of pigments which could be available to make light energy available to the earliest cellular forms of life. PAH and their derivatives all absorb light in the near UV and blue wavelengths, and are candidates for primitive pigments. We have explored this possibility in a model system consisting of mixtures of pyrene, fluoranthene and pyrene derivatives with hexadecane, dispersed in dilute salt solutions. Upon illumination, photochemical oxidation of the hexadecane occurs, with long-chain amphiphiles such as 2-hexadecanone and 2-hexadecanol as products. Because the reaction proceeds under strictly anaerobic conditions, the source of oxygen is apparently water. We also observed acid pH shifts during illumination. Photochemical production of hydrogen ion is significant, in that chemiosmotic proton gradients across membranes are used by all contemporary cells as a source of energy for ATP synthesis and nutrient transport. To test whether the protons could be used to transduce light energy into a useful form, PAH derivatives were included in lipid bilayer membranes (liposomes). Upon illumination, protons (or acidic products) were produced and accumulated inside the vesicles, so that substantial pH gradients were established across the membranes, acid inside. We conclude that PAH dissolved in aliphatic hydrocarbons absorb light energy and use it to oxidize the hydrocarbon to long-chain amphiphilic molecules. The oxidation is accompanied by release of protons. If PAH derivatives are included in the

  11. Tensile strengths and porosities of solar system primitive bodies

    NASA Astrophysics Data System (ADS)

    Trigo-Rodriguez, J. M.; Llorca, J.; Blum, J.

    Recent measurements of asteroid bulk densities suggest that rubble-pile asteroids with typical porosities of 30 to 50% may be common (Britt et al., 2006). However, the presence of such objects doesn't mean necessarily that the initial porosity had been preserved (Kerridge, 1993). In fact, the fluffy aggregates produced in laboratory experiments that we expect to be representative of the oldest protoplanetary disk materials, exhibit even higher porosities (Blum et al., 2006). Recent results confirm that primitive meteorites (like e.g. CM carbonaceous chondrites) are compacted samples of the nebula matter exhibiting different density and porosity that their precursors materials (Trigo-Rodríguez et al., 2006). Consequently, aqueous alteration, brecciation, and impact-induced metamorphism make very unlikely to find pristine bodies between the asteroidal population. However, there is clear evidence for the existence of high-porosity bodies between the C-type asteroids like e.g. Mathilde (Housen et al., 1999) or the Tagish Lake parent body (Brown et al., 2002). Although extensive post-accretionary processing of meteorite parent bodies can produce high degrees of porosity, only the most pristine ones seem to preserve more than 50% of porosity. Consequently, we should look for these low strength bodies among the C-type asteroids, or very especially in some unprocessed comets that continue being representative of the precursor materials. Recent suggestion that CI1 chondrites are originated from comets should be studied in this context (Gounelle et al., 2006). Particularly, we think that studies of the porosity and strength of primitive meteorites would provide valuable clues on the origin and nature of their parent bodies. REFERENCES Blum J., R. Schräpler, B.J.R. Davidson and J.M. Trigo-Rodríguez (2006) Astroph. J., submitted. Britt D.T., G.J. Consolmagno, and W.J. Merline (2006) Lunar Planet. Sci. Conf. Abstract #2214. Brown, P. G., D. O. Revelle, E. Tagliaferri, and A

  12. Metachronous T-Lymphoblastic Lymphoma and Burkitt Lymphoma in a Child With Constitutional Mismatch Repair Deficiency Syndrome.

    PubMed

    Alexander, Thomas B; McGee, Rose B; Kaye, Erica C; McCarville, Mary Beth; Choi, John K; Cavender, Cary P; Nichols, Kim E; Sandlund, John T

    2016-08-01

    Constitutional mismatch repair deficiency (CMMRD) is a cancer predisposition syndrome associated with a high risk of developing early-onset malignancies of the blood, brain, and intestinal tract. We present the case of a patient with T-lymphoblastic lymphoma at the age of 3 years, followed by Burkitt lymphoma 10 years later. This patient also exhibited numerous nonmalignant findings including café au lait spots, lipomas, bilateral renal nodules, a nonossifying fibroma, multiple colonic adenomas, and a rapidly enlarging pilomatrixoma. The spectrum of malignant and nonmalignant neoplasms in this patient highlights the remarkable diversity, and early onset, of lesions seen in children with CMMRD. PMID:27037742

  13. Cancer

    MedlinePlus

    Cancer begins in your cells, which are the building blocks of your body. Normally, your body forms ... be benign or malignant. Benign tumors aren't cancer while malignant ones are. Cells from malignant tumors ...

  14. Metachronous/concomitant B-cell neoplasms with discordant light-chain or heavy-chain isotype restrictions: evidence of distinct B-cell neoplasms rather than clonal evolutions.

    PubMed

    Wei, Qiang; Sebastian, Siby; Papavassiliou, Paulie; Rehder, Catherine; Wang, Endi

    2014-10-01

    Metachronous/concomitant B-cell neoplasms with distinct morphology are usually considered clonally related. We retrospectively analyzed 4 cases of metachronous/concomitant B-cell neoplasms with discordant light-chain/heavy-chain restrictions. The primary diagnoses included chronic lymphocytic leukemia (CLL; n = 2), lymphoplasmacytic lymphoma (n = 1), and pediatric follicular lymphoma (FL; n = 1). The respective secondary diagnoses included diffuse large B-cell lymphoma (DLBCL; n = 2), plasmablastic myeloma, and pediatric FL. The secondary B-cell neoplasm occurred after the primary diagnosis in 3 cases, with the median interval of 120 months (range, 21-216), whereas the remaining 1 case had the 2 neoplasms (CLL/DLBCL) diagnosed concurrently. Histology suggested aggressive transformation in 3 cases and recurrence in 1 case (FL). Nonetheless, 3 cases showed discordant light-chain restrictions between the 2 B-cell neoplasms, whereas in the remaining case (lymphoplasmacytic lymphoma/plasmablastic myeloma), the 2 neoplasms shared κ light-chain restriction but expressed different heavy-chain isotypes (IgM versus IgA). The 2 CLL/DLBCL cases had polymerase chain reaction-based IGH/K gene rearrangement study and amplicon sequence analysis performed, which demonstrated distinct clonal amplicons between the 2 B-cell neoplasms in each case. Concomitant/metachronous B-cell neoplasms may be clonally unrelated, which can be confirmed by immunoglobulin isotype analysis and/or genotypic studies. We advocate analysis of clonal identities in large cell transformation or recurrent disease compared with primary indolent B-cell neoplasm because of a potential difference in prognosis between clonally related and unrelated secondary B-cell neoplasms. PMID:25179408

  15. Multiple Ewing Sarcoma/Primitive Neuroectodermal Tumors in the Mediastinum

    PubMed Central

    Bae, Sung Hwan; Hwang, Jung Hwa; Da Nam, Bo; Kim, Hyun Jo; Kim, Ki-Up; Kim, Dong Won; Choi, In Ho

    2016-01-01

    Abstract Ewing sarcoma/primitive neuroectodermal tumors (ES/PNET) are high-grade malignant neoplasms. These malignancies present very rare tumors of thoracopulmonary area and even rarer in the mediastinum. In our knowledge, ES/PNET presented with multiple mediastinal masses has not been reported previously. We experienced a case of a 42-year-old man presented with gradual onset of left-side pleuritic chest pain. A contrast-enhanced chest computed tomography (CT) scan showed separate 2 large heterogeneously enhancing masses in each anterior and middle mediastinum of the left hemithorax. Positron emission tomography-computed tomography (PET-CT) scan revealed high fluorodeoxyglucose (FDG) uptake in the mediastinal masses. After surgical excision for the mediastinal masses, both of the masses were diagnosed as the ES/PNET group of tumors on the histopathologic examination. The patient refused postoperative adjuvant chemotherapy and came back with local tumor recurrence and distant metastasis on 4-month follow-up after surgical resection. We report this uncommon form of ES/PNET. We are to raise awareness that this rare malignancy should be considered as a differential diagnosis of the malignant mediastinal tumors and which can be manifested as multiple masses in a patient. Understanding this rare entity of extra-skeletal ES/PNET and characteristic imaging findings can help radiologists and clinicians to approach proper diagnosis and better management for this highly malignant tumor. PMID:26886614

  16. Dynamical movement primitives: learning attractor models for motor behaviors.

    PubMed

    Ijspeert, Auke Jan; Nakanishi, Jun; Hoffmann, Heiko; Pastor, Peter; Schaal, Stefan

    2013-02-01

    Nonlinear dynamical systems have been used in many disciplines to model complex behaviors, including biological motor control, robotics, perception, economics, traffic prediction, and neuroscience. While often the unexpected emergent behavior of nonlinear systems is the focus of investigations, it is of equal importance to create goal-directed behavior (e.g., stable locomotion from a system of coupled oscillators under perceptual guidance). Modeling goal-directed behavior with nonlinear systems is, however, rather difficult due to the parameter sensitivity of these systems, their complex phase transitions in response to subtle parameter changes, and the difficulty of analyzing and predicting their long-term behavior; intuition and time-consuming parameter tuning play a major role. This letter presents and reviews dynamical movement primitives, a line of research for modeling attractor behaviors of autonomous nonlinear dynamical systems with the help of statistical learning techniques. The essence of our approach is to start with a simple dynamical system, such as a set of linear differential equations, and transform those into a weakly nonlinear system with prescribed attractor dynamics by means of a learnable autonomous forcing term. Both point attractors and limit cycle attractors of almost arbitrary complexity can be generated. We explain the design principle of our approach and evaluate its properties in several example applications in motor control and robotics. PMID:23148415

  17. Intrasellar chordoma associated with a primitive persistent trigeminal artery.

    PubMed

    Navas, Marta; Martinez, Pedro; Shakur, Sophia F; Barbosa, Antonio; Barcena, Eduardo; Gordillo, Carlos; Fraga, Javier; Blanco, Concepcion; Sola, Rafael G

    2015-01-01

    Chordomas located primarily in the sellar region are uncommon, and may be misdiagnosed non-functioning pituitary adenoma. Furthermore, the association of a persistent primitive trigeminal artery (PPTA) with an intrasellar chordoma is extremely rare, and no similar cases have been reported in the literature to date. The coexistence of intrasellar chordoma (ISC) and PPTA makes safe and complete tumor resection challenging, and preoperative endovascular occlusion of this artery may be helpful. We report a case of a 32-year-old man who developed right hemifacial paresthesias and a cranial nerve six palsy. MRI study demonstrated the presence of a primary ISC associated with a PPTA. Angiographic balloon test occlusion of the PPTA revealed no neurological changes, so this vessel was endovascularly occluded by coiling. The lesion was subtotally removed through a sublabial transsphenoidal approach, without intraoperative bleeding complications. Histological examination of the lesion was consistent with the diagnosis of chordoma. Detailed preoperative neurovascular evaluation may be useful to detect vascular anomalies associated with intracranial chordomas, such as PPTA. In this report we emphasize the importance of appropriate treatment of vascular anomalies prior intrasellar lesions resection that may facilitate surgery and avoid potential hazardous intraoperative bleeding complications. PMID:25640561

  18. Rapid world modeling: Fitting range data to geometric primitives

    SciTech Connect

    Feddema, J.; Little, C.

    1996-12-31

    For the past seven years, Sandia National Laboratories has been active in the development of robotic systems to help remediate DOE`s waste sites and decommissioned facilities. Some of these facilities have high levels of radioactivity which prevent manual clean-up. Tele-operated and autonomous robotic systems have been envisioned as the only suitable means of removing the radioactive elements. World modeling is defined as the process of creating a numerical geometric model of a real world environment or workspace. This model is often used in robotics to plan robot motions which perform a task while avoiding obstacles. In many applications where the world model does not exist ahead of time, structured lighting, laser range finders, and even acoustical sensors have been used to create three dimensional maps of the environment. These maps consist of thousands of range points which are difficult to handle and interpret. This paper presents a least squares technique for fitting range data to planar and quadric surfaces, including cylinders and ellipsoids. Once fit to these primitive surfaces, the amount of data associated with a surface is greatly reduced up to three orders of magnitude, thus allowing for more rapid handling and analysis of world data.

  19. Solar Electric Propulsion for Primitive Body Science Missions

    NASA Technical Reports Server (NTRS)

    Witzberger, Kevin E.

    2006-01-01

    This paper describes work that assesses the performance of solar electric propulsion (SEP) for three different primitive body science missions: 1) Comet Rendezvous 2) Comet Surface Sample Return (CSSR), and 3) a Trojan asteroid/Centaur object Reconnaissance Flyby. Each of these missions launches from Earth between 2010 and 2016. Beginning-of-life (BOL) solar array power (referenced at 1 A.U.) varies from 10 to 18 kW. Launch vehicle selections range from a Delta II to a Delta IV medium-class. The primary figure of merit (FOM) is net delivered mass (NDM). This analysis considers the effects of imposing various mission constraints on the Comet Rendezvous and CSSR missions. Specifically, the Comet Rendezvous mission analysis examines an arrival date constraint with a launch year variation, whereas the CSSR mission analysis investigates an Earth entry velocity constraint commensurate with past and current missions. Additionally, the CSSR mission analysis establishes NASA's New Frontiers (NF) Design Reference Mission (DRM) in order to evaluate current and future SEP technologies. The results show that transfer times range from 5 to 9 years (depending on the mission). More importantly, the spacecraft's primary propulsion system performs an average 5-degree plane change on the return leg of the CSSR mission to meet the previously mentioned Earth entry velocity constraint. Consequently, these analyses show that SEP technologies that have higher thrust-to-power ratios can: 1) reduce flight time, and 2) change planes more efficiently.

  20. A simple physical mechanism enables homeostasis in primitive cells.

    PubMed

    Engelhart, Aaron E; Adamala, Katarzyna P; Szostak, Jack W

    2016-05-01

    The emergence of homeostatic mechanisms that enable maintenance of an intracellular steady state during growth was critical to the advent of cellular life. Here, we show that concentration-dependent reversible binding of short oligonucleotides, of both specific and random sequence, can modulate ribozyme activity. In both cases, catalysis is inhibited at high concentrations, and dilution activates the ribozyme via inhibitor dissociation, thus maintaining near-constant ribozyme specific activity throughout protocell growth. To mimic the result of RNA synthesis within non-growing protocells, we co-encapsulated high concentrations of ribozyme and oligonucleotides within fatty acid vesicles, and ribozyme activity was inhibited. Following vesicle growth, the resulting internal dilution produced ribozyme activation. This simple physical system enables a primitive homeostatic behaviour: the maintenance of constant ribozyme activity per unit volume during protocell volume changes. We suggest that such systems, wherein short oligonucleotides reversibly inhibit functional RNAs, could have preceded sophisticated modern RNA regulatory mechanisms, such as those involving miRNAs. PMID:27102678

  1. A simple physical mechanism enables homeostasis in primitive cells

    PubMed Central

    Engelhart, Aaron E.; Adamala, Katarzyna; Szostak, Jack W.

    2016-01-01

    The emergence of homeostatic mechanisms that enabled maintenance of an intracellular steady-state during growth was critical to the advent of cellular life. Here, we show that concentration-dependent reversible binding of short oligonucleotides, of both specific and random sequence, can modulate ribozyme activity. In both cases, catalysis is inhibited at high concentrations, and dilution activates the ribozyme via inhibitor dissociation, thus maintaining near-constant ribozyme specific activity throughout protocell growth. To mimic the result of RNA synthesis within non-growing protocells, we co-encapsulated high concentrations of ribozyme and oligonucleotides within fatty acid vesicles; ribozyme activity was inhibited. Following vesicle growth, the resulting internal dilution produced ribozyme activation. This simple physical system enables a primitive homeostatic behavior: the maintenance of constant ribozyme activity per unit volume during protocell volume changes. We suggest such systems, wherein short oligonucleotides reversibly inhibit functional RNAs, could have preceded sophisticated modern RNA regulatory mechanisms, such as those involving miRNAs. PMID:27102678

  2. A primitive therizinosauroid dinosaur from the Early Cretaceous of Utah

    USGS Publications Warehouse

    Kirkland, J.I.; Zanno, L.E.; Sampson, S.D.; Clark, J.M.; DeBlieux, D.D.

    2005-01-01

    Therizinosauroids are an enigmatic group of dinosaurs known mostly from the Cretaceous period of Asia, whose derived members are characterized by elongate necks, laterally expanded pelves, small, leaf-shaped teeth, edentulous rostra and mandibular symphyses that probably bore keratinized beaks. Although more than a dozen therizinosauroid taxa are known, their relationships within Dinosauria have remained controversial because of fragmentary remains and an unusual suite of characters. The recently discovered 'feathered' therizinosauroid Beipiaosaurus from the Early Cretaceous of China helped to clarify the theropod affinities of the group. However, Beipiaosaurus is also poorly represented. Here we describe a new, primitive therizinosauroid from an extensive paucispecific bonebed at the base of the Cedar Mountain Formation (Early Cretaceous) of east-central Utah. This new taxon represents the most complete and most basal therizinosauroid yet discovered. Phylogenetic analysis of coelurosaurian theropods incorporating this taxon places it at the base of the clade Therizinosauroiden, indicating that this species documents the earliest known stage in the poorly understood transition from carnivory to herbivory within Therizinosauroidea. The taxon provides the first documentation, to our knowledge, of therizinosauroids in North America during the Early Cretaceous.

  3. Primitive Neuroectodermal Tumor (PNET) of the kidney: a case report

    PubMed Central

    Pomara, Giorgio; Cappello, Francesco; Cuttano, Maria G; Rappa, Francesca; Morelli, Girolamo; Mancini, Pierantonio; Selli, Cesare

    2004-01-01

    Background A case of Primitive Neuroectodermal Tumor (PNET) of the kidney in a 27-year-old woman is presented. Few cases are reported in the literature with a variable, nonspecific presentation and an aggressive behaviour. In our case, a radical nephrectomy with lymphadenectomy was performed and there was no residual or recurrent tumour at 24-month follow-up. Methods The surgical specimens were formalin-fixed and paraffin embedded. The sections were stained with routinary H&E. Immunohistochemistry was performed. Results The immunohistochemical evaluation revealed a diffuse CD99 positivity in the cytoplasm of the neoplastic cells. Pankeratin, cytokeratin AE1/AE3, vimentin, desmin, S100, cromogranin were negative. The clinical presentation and the macroscopic aspect, together with the histological pattern, the cytological characteristic and the cellular immunophenotype addressed the diagnosis towards primary PNET of kidney. Conclusions Since sometimes it is difficult to discriminate between PNET and Ewing's tumour, we reviewed the difficulties in differential diagnosis. These tumors have a common precursor but the stage of differentiation in which it is blocked is probably different. This could also explain their different biological behaviour and prognosis. PMID:14969593

  4. Interstellar grains in primitive meteorites - Diamond, silicon carbide, and graphite

    NASA Technical Reports Server (NTRS)

    Anders, Edward; Zinner, Ernst

    1993-01-01

    Primitive meteorites contain a few parts per million (ppm) of pristine interstellar grains that provide information on nuclear and chemical processes in stars. Their interstellar origin is proven by highly anomalous isotopic ratios, varying more than 1000-fold for elements such as C and N. Most grains isolated thus far are stable only under highly reducing conditions (C/O greater than 1), and apparently are 'stardust' formed in stellar atmospheres. Microdiamonds, of median size about 10 A, are most abundant (about 400-1800 ppm) but least understood. They contain anomalous noble gases including Xe-HL, which shows the signature of the r- and p-processes. Silicon carbide, of grain size 0.2-10 microns and abundance about 6 ppm, shows the signature of the s-process and apparently comes mainly from red giant carbon (AGB) stars of 1-3 solar masses. Some grains appear to be not less than 10 exp 9 a older than the solar system. Graphite spherules of grain size 0.8-7 microns and abundance less than 2 ppm contain highly anomalous C and noble gases, as well as large amounts of fossil Mg-26 from the decay of extinct Al-26. They seem to come from at least three sources, probably AGB stars, novae, and Wolf-Rayet stars.

  5. Primitive immune systems: are your ways my ways?

    PubMed

    Rinkevich, Baruch

    2004-04-01

    Although vertebrate immune systems have been commonly conceived as exquisitely developed to combat pervasiveness by pathogens, they are not infallible. The enigmatic expression of histocompatibility in vertebrates, the manifestation of natural chimerism, autoimmunity, malignancy, and other puzzling outcomes hint that immunity did not arise in evolution to fight infections and that this capacity is a late evolutionary appendage, owing its appearance to the redeployment of a system developed for other reasons. Allorecognition in the colonial tunicate Botryllus schlosseri serves here as a platform for a contending paradigm, advocating that immunity has developed as a surveillance machinery against and for purging of nascent selfish cells (stemmed from a kin organism or from transformed cells within the organism of origin). Defense against pathogens (always representing xenogeneic aliens) appeared later, revealing the multiplicity of newly developed phenomena. Allorecognition events characteristic of the Botryllus primitive immune system, such as fusion versus rejection, the morphological resorption with its expressed hierarchy, and the somatic/germ-cell parasitic outcomes, provide clues to the evolutionary basis of allorecognition. Recent work on Botryllus immunity that highlights the cost of littering individuality by somatic variants/allogeneic cells is discussed. PMID:15199952

  6. [Management of laryngeal cancers].

    PubMed

    Brunin, F; Rodriguez, J; Cougniot-Lescure, S; Point, D; Jaulerry, C; Brugère, J

    1995-04-01

    With 5,000 cases yearly, laryngeal carcinomas account in France for the third of squamous cell cancers of the upper digestive and respiratory tract. The crude survival rate is 50% at 5 years. Carcinomas of vocal cords are often diagnosed as early stages if dysphonia leads the patients to the ENT specialist within 2 weeks. Cure of the primary is achieved in 90% of the early stages by radiotherapy with narrow fields or partial surgery, with a 80% 5 years survival rate. Advanced tumors are often treated by total laryngectomy and postoperative radiotherapy. Supra-glottic cancers (epiglottis) are more serious. Unilateral dysphagia or upper cervical neck node often delay early diagnosis. A total laryngectomy is the commonest treatment. The 5 years survival rate of 40% is due to local and/or regional failures and metachronous cancers in head and neck, and radiotherapy remains the two major treatments. Primary prevention is based upon suppression of tobacco and reduction of alcoholic consumption, secondary prevention on resection of leucoplakia and close follow-up of patients with chronic laryngitis. PMID:7761753

  7. Melting the hydrous, subarc mantle: the origin of primitive andesites

    NASA Astrophysics Data System (ADS)

    Mitchell, Alexandra L.; Grove, Timothy L.

    2015-08-01

    This experimental study is the first comprehensive investigation of the melting behavior of an olivine + orthopyroxene ± spinel—bearing fertile mantle (FM) composition as a function of variable pressure and water content. The fertile composition was enriched with a metasomatic slab component of ≤0.5 % alkalis and investigated from 1135 to 1470 °C at 1.0-2.0 GPa. A depleted lherzolite with 0.4 % alkali addition was also studied from 1225 to 1240 °C at 1.2 GPa. Melts of both compositions were water-undersaturated: fertile lherzolite melts contained 0-6.4 wt% H2O, and depleted lherzolite melts contained ~2.5 wt% H2O. H2O contents of experimental glasses are measured using electron microprobe, secondary ion mass spectrometry, and synchrotron-source reflection Fourier transform infrared spectroscopy, a novel technique for analyzing H2O in petrologic experiments. Using this new dataset in conjunction with results from previous hydrous experimental studies, a thermobarometer and a hygrometer-thermometer are presented to determine the conditions under which primitive lavas were last in equilibration with the mantle. These predictive models are functions of H2O content and pressure, respectively. A predictive melting model is also presented that calculates melt compositions in equilibrium with an olivine + orthopyroxene ± spinel residual assemblage (harzburgite). This model quantitatively predicts the following influences of H2O on mantle lherzolite melting: (1) As melting pressure increases, melt compositions become more olivine-normative, (2) as melting extent increases, melt compositions become depleted in the normative plagioclase component, and (3) as melt H2O content increases, melts become more quartz-normative. Natural high-Mg# [molar Mg/(Mg + Fe2+)], high-MgO basaltic andesite and andesite lavas—or primitive andesites (PAs)—contain high SiO2 contents at mantle-equilibrated Mg#s. Their compositional characteristics cannot be readily explained by melting

  8. Towards a quantum field theory of primitive string fields

    SciTech Connect

    Ruehl, W.

    2012-10-15

    We denote generating functions of massless even higher-spin fields 'primitive string fields' (PSF's). In an introduction we present the necessary definitions and derive propagators and currents of these PDF's on flat space. Their off-shell cubic interaction can be derived after all off-shell cubic interactions of triplets of higher-spin fields have become known. Then we discuss four-point functions of any quartet of PSF's. In subsequent sections we exploit the fact that higher-spin field theories in AdS{sub d+1} are determined by AdS/CFT correspondence from universality classes of critical systems in d-dimensional flat spaces. The O(N) invariant sectors of the O(N) vector models for 1 {<=} N {<=}{infinity} play for us the role of 'standard models', for varying N, they contain, e.g., the Ising model for N = 1 and the spherical model for N = {infinity}. A formula for the masses squared that break gauge symmetry for these O(N) classes is presented for d = 3. For the PSF on AdS space it is shown that it can be derived by lifting the PSF on flat space by a simple kernel which contains the sum over all spins. Finally we use an algorithm to derive all symmetric tensor higher-spin fields. They arise from monomials of scalar fields by derivation and selection of conformal (quasiprimary) fields. Typically one monomial produces a multiplet of spin s conformal higher-spin fields for all s {>=} 4, they are distinguished by their anomalous dimensions (in CFT{sub 3}) or by theirmass (in AdS{sub 4}). We sum over these multiplets and the spins to obtain 'string type fields', one for each such monomial.

  9. Deep Interior: Probing the Structure of Primitive Bodies

    NASA Astrophysics Data System (ADS)

    Asphaug, Erik; Scheeres, Daniel; Safaeinili, Ali

    Deep Interior is a mature Discovery-class mission concept focused on probing the geophysical behavior of primitive bodies, from the mechanics of their exterior materials to the structures of their interiors. Its theme is to discover how small bodies work - to learn the natural origin and evolution of asteroids, comets and other primitive bodies through radar reflection tomography and through detailed observations of the local and global effects of cratering. Learning the structure and mechanical response of asteroids and comets is also a precursor to resource utilization and hazardous asteroid mitigation. Overall the mission is aligned with NASA strategic sub-goal 3C, to advance scientific knowledge of the origin and history of the solar system ... and the hazards and resources present as humans explore space. Deep Interior deploys no complex landers or sub-spacecraft; the scientific instruments are a radar and a camera. A blast cratering experiments triggered by grenades leads to a low cost seismological investigation which complements the radar investigation. A desired addition is an imaging spectrometer. The science instruments are high heritage, as are the navigation techniques for orbiting and station-keeping. The mission conducts the following investigations at one or more asteroids: Radar Reflection Tomography (RRT). The first science phase is to operate a penetrating radar during each several-month rendezvous, deployed in reflection mode in the manner of ongoing radar investigations underway by Mars Express, Mars Reconnaissance Orbiter, and Kaguya. The RRT technique (Safaeinili et al., MAPS 2002) is analogous to performing a "CAT scan" from orbit: closely sampled radar echoes are processed to yield volumetric maps of mechanical and compositional boundaries, and to measure interior dielectric properties. Deep Interior utilizes a polar orbit (or station keeping) while the asteroid spins underneath; the result is to "peel the apple" with thousands of unique

  10. An extremely primitive star in the Galactic halo.

    PubMed

    Caffau, Elisabetta; Bonifacio, Piercarlo; François, Patrick; Sbordone, Luca; Monaco, Lorenzo; Spite, Monique; Spite, François; Ludwig, Hans-G; Cayrel, Roger; Zaggia, Simone; Hammer, François; Randich, Sofia; Molaro, Paolo; Hill, Vanessa

    2011-09-01

    The early Universe had a chemical composition consisting of hydrogen, helium and traces of lithium; almost all other elements were subsequently created in stars and supernovae. The mass fraction of elements more massive than helium, Z, is known as 'metallicity'. A number of very metal-poor stars has been found, some of which have a low iron abundance but are rich in carbon, nitrogen and oxygen. For theoretical reasons and because of an observed absence of stars with Z < 1.5 × 10(-5), it has been suggested that low-mass stars cannot form from the primitive interstellar medium until it has been enriched above a critical value of Z, estimated to lie in the range 1.5 × 10(-8) to 1.5 × 10(-6) (ref. 8), although competing theories claiming the contrary do exist. (We use 'low-mass' here to mean a stellar mass of less than 0.8 solar masses, the stars that survive to the present day.) Here we report the chemical composition of a star in the Galactic halo with a very low Z (≤ 6.9 × 10(-7), which is 4.5 × 10(-5) times that of the Sun) and a chemical pattern typical of classical extremely metal-poor stars--that is, without enrichment of carbon, nitrogen and oxygen. This shows that low-mass stars can be formed at very low metallicity, that is, below the critical value of Z. Lithium is not detected, suggesting a low-metallicity extension of the previously observed trend in lithium depletion. Such lithium depletion implies that the stellar material must have experienced temperatures above two million kelvin in its history, given that this is necessary to destroy lithium. PMID:21886158

  11. Searching for and Studying Primitive Solar System Objects

    NASA Astrophysics Data System (ADS)

    Chen, Jun

    1997-08-01

    Jovian Trojans, 'Trojans' of Saturn, Uranus and Neptune (Lagrangian objects, in the language of this dissertation), Kuiper Belt objects (KBOs) and Centaurs are believed to be the pristine bodies in the solar system. This thesis project describes a search for, and investigation of, these primitive objects using state-of-the-art charge-coupled device (CCD) cameras. With a CCD, 93 Jovian L4 Trojans with sizes ranging from ~4 km to 40 km diameter were discovered. The cumulative magnitude-frequency distribution is found to have slope of 0.397 ± 0.008 and the bias corrected mean inclination is 13o.7 ± 0o.5. The total number of the L4 Trojans, the size and total mass of the L4 cloud are discussed. My study shows that the previously suggested leakage rate of Trojans may be overestimated and that Trojans can not be a significant source of short period comets. No Lagrangian objects were discovered in this project. Instead, the 99% confidence level (~3/ σ) upper limits to their surface densities are given. Larger sky needs to be covered before the existence of such objects can be concluded. Nevertheless, the current survey shows that the surface density of Saturnian 'Trojans' is lower than that of Jovian Trojans. In addition, 16 published and 12 yet to be published KBOs were discovered in this project, as well as one Centaur. The dynamical properties of 42 published KBOs and 7 Centaurs are studied and their photometric properties are discussed. Our study shows that there is no discrepancy between the numbers of discovered Centaurs and those of KBOs as some suggested.

  12. In vitro cloning and homestead cultivation of primitive Musa cultivars.

    PubMed

    Mukunthakumar, S; Seeni, S

    2005-01-01

    Two primitive diploid Musa cultivars, Matti and Chemmatti from the extreme southern part of the Western Ghats were multiplied by in vitro culture of sucker-derived shoot apices. Decontaminated corm explants (1 cm x 1 cm) having shoot apex (approximately 0.3 cm) cultured for 1 month in Murashige and Skoog basal agar medium was cut vertically into eight segments and each segment having a part of shoot meristem was cultured in presence of 6-benzylaminopurine (BAP) and combinations of BAP and indole-3-acetic acid (IAA) or indole-3-butyricacid (IBA) to produce multiple shoots. After 12 weeks of culture, maximum number of shoots (32) in both the cultivars were produced in approximate 60% of the explants in presence of BAP and IAA each at 1.5 mg/l(-1) (Matti) and 40% of the explants in 2.5 mg/l(-1) of BAP and 1.5 mg/l(-1) of IAA (Chemmatti). Buds were formed from the base of the subcultured shoots and somewhat more number (34) of shoots were obtained in Matti than in Chemmatti (31) after 8 weeks. Difference in the concentration of cytokinin required for shoot initiation and multiplication, persistence of exudation through the subculture and red colouration of the early formed sheathing leaf bases in the shoots in Chemmatti indicated possible genotypic differences between the two cultivars. Multiple shoot proliferation achieved through five subcultures of the isolated shoots without any decline. Transfer of shoots (4-5 cm) into MS basal medium favoured rooting in 4 weeks and rooted plants (9 cm) were hardened and established (80-95%). Mericlones of Matti cultivated in homesteads produced bunches of uniform characters in 13 months. PMID:15691071

  13. The equivalent efficacy of multiple operations for multiple primary lung cancer and a single operation for single primary lung cancer

    PubMed Central

    Dai, Liang; Yang, He-Li; Yan, Wan-Pu; Liang, Zhen; Xiong, Hong-Chao; Kang, Xiao-Zheng; Yang, Yong-Bo; Fu, Hao; Fan, Meng-Ying

    2016-01-01

    Background The incidence of synchronous and metachronous multiple primary lung cancers (MPLCs) has been increasing recently. The new multidisciplinary classification of lung adenocarcinoma and TNM Classification of Lung Cancer (7th edition, 2009), have improved the understanding of MPLC. Most researchers recommend that surgical therapy should be actively pursued if the patient’s physical condition and lung function permit it and if a complete cure can be achieved. However, few studies have reported the long-term efficacy of surgical treatment for MPLC, which we explored in this study. Methods A total of 1,290 Lung cancer patients from a prospectively maintained database, treated by a single surgeon group between January 2000 and July 2013, at Beijing Cancer Hospital, Peking University, were reviewed. We retrospectively analyzed the clinical data of 31 patients diagnosed with MPLC out of 1290 lung cancer patients, focusing on long-term survival. Results MPLC patients accounted for 2.4% (31/1,290) of the patient cohort: 27 had synchronous MPLC (87.1%) and 4 had metachronous MPLC (12.9%). The 1-, 3- and 5-year postoperative survival rates were 100%, 75.8% and 75.8%. On stratification according to TNM stage, the 1-, 3- and 5-year of patients with stage I cancer (20 patients) were 100%, 77.2% and 77.2%, not statistically significant with those for the entire cohort (1,290 patients; 95.4%, 80.5% and 66.2%, P=0.455). Conclusions When the patient’s physical condition and tumor-related factors permit it, surgery should be the first choice of treatment for MPLC; it is associated with an equivalent efficacy to that of surgery for single primary lung cancer. PMID:27162659

  14. [Cancer].

    PubMed

    de la Peña-López, Roberto; Remolina-Bonilla, Yuly Andrea

    2016-09-01

    Cancer is a group of diseases which represents a significant public health problem in Mexico and worldwide. In Mexico neoplasms are the second leading cause of death. An increased morbidity and mortality are expected in the next decades. Several preventable risk factors for cancer development have been identified, the most relevant including tobacco use, which accounts for 30% of the cancer cases; and obesity, associated to another 30%. These factors, in turn, are related to sedentarism, alcohol abuse and imbalanced diets. Some agents are well knokn to cause cancer such as ionizing radiation, viruses such as the papilloma virus (HPV) and hepatitis virus (B and C), and more recently environmental pollution exposure and red meat consumption have been pointed out as carcinogens by the International Agency for Research in Cancer (IARC). The scientific evidence currently available is insufficient to consider milk either as a risk factor or protective factor against different types of cancer. PMID:27603890

  15. Une angiocholite secondaire à un thrombus tumoral d'une tumeur neuroendocrine primitive du foie

    PubMed Central

    Baba, Hicham; Allaoui, Mohamed; Elfahssi, Mohammed; Bounaim, Ahmed; Ali, Abdelmounaim Ait; Oukabli, Mohamed; Sair, Khalid; Zentar, Aziz

    2015-01-01

    Nous rapportons le cas exceptionnel d'une patiente de 54 ans prise en charge pour une angiocholite due à un thrombus tumoral, d'une tumeur neuroendocrine primitive (TNE Ive) du foie, dans la voie biliaire principale. PMID:26966504

  16. Why 3 and 5 Are Always Factors of Primitive Pythagorean Triples

    ERIC Educational Resources Information Center

    Leyendekkers, J. V.; Shannon, A. G.

    2011-01-01

    Analysis of integer structure and right-end-digits can illustrate why 3 and 5 are features of primitive Pythagorean triples. The results also utilize the triangular and pentagonal numbers. (Contains 5 tables.)

  17. Model-Based Instantiation of Symbols from Structurally Related Image Primitives

    NASA Astrophysics Data System (ADS)

    Egeli, Eliane; Klein, Fernand

    1986-04-01

    A generalized syntactic pattern recognition method is presented and applied to the interpretation of binary images containing arbitrary line structures, e.g. documents with graphics like technical drawings or road maps. The grammar is based on a set of robust image primitives as terminal elements. These primitive elements include their spatial relationship and are represented as a relational database. The primitive extraction uses (Euklidean) distance transforms, thinning and label propagation methods. The model description uses an attributed grammar with generalized production rules which are formulated by predicate calculus. This formulation allows straightforward implementation in PROLOG. Symbol recognition is thus reduced to an instantiation process using the built-in inference mechanism of PROLOG. The efficiency of primitive extraction, relational description and symbol recognition is demonstrated in technical drawings containing several line styles (e.g. dashed lines).

  18. Primitive neuroectodermal tumor presenting as a delayed sequela to cranial irradiation and intrathecal methotrexate

    SciTech Connect

    Barasch, E.S.; Altieri, D.; Decker, R.E.; Ahmed, S.; Lin, J.

    1988-11-01

    A patient developed a primitive neuroectodermal tumor (PNET) many years after therapeutic cerebral radiation and methotrexate treatment for leukemia. The differential radiologic and histologic diagnoses, as well as the possible co-oncogenic effects of radiation and methotrexate, are evaluated.

  19. Low-Resolution Spectroscopy of Primitive Asteroids: Progress Report for SARA/VSU Survey

    NASA Technical Reports Server (NTRS)

    Leake, M. A.; Nogues, J. P.; Gaines, J. K.; Looper, J. K.; Freitas, K. A.

    2001-01-01

    Progress on a low-resolution survey of primitive C-class asteroids continues using new equipment (and its associated problems) to understand aqueous alteration in the solar system. Additional information is contained in the original extended abstract.

  20. Supersymmetry algebra cohomology. III. Primitive elements in four and five dimensions

    NASA Astrophysics Data System (ADS)

    Brandt, Friedemann

    2011-05-01

    The primitive elements of the supersymmetry algebra cohomology as defined in a previous paper are computed for standard supersymmetry algebras in four and five dimensions, for all signatures of the metric and any number of supersymmetries.

  1. Mid-Infrared Spectroscopy of Calcium-Aluminium-Rich Inclusions: A Tool to Detect Primitive Asteroids?

    NASA Astrophysics Data System (ADS)

    Melwani Daswani, M.; Morlok, A.; Wolters, S. D.; Grady, M. M.

    2014-09-01

    Calcium-aluminium-rich inclusions in Vigarano, Ornans and Allende have characteristic refractory components that may help us identify primitive near-Earth asteroids through mid-IR space telescope spectrometers. We have identified some features.

  2. Supersymmetry algebra cohomology. III. Primitive elements in four and five dimensions

    SciTech Connect

    Brandt, Friedemann

    2011-05-15

    The primitive elements of the supersymmetry algebra cohomology as defined in a previous paper are computed for standard supersymmetry algebras in four and five dimensions, for all signatures of the metric and any number of supersymmetries.

  3. Primitive Fitting Based on the Efficient multiBaySAC Algorithm

    PubMed Central

    Kang, Zhizhong; Li, Zhen

    2015-01-01

    Although RANSAC is proven to be robust, the original RANSAC algorithm selects hypothesis sets at random, generating numerous iterations and high computational costs because many hypothesis sets are contaminated with outliers. This paper presents a conditional sampling method, multiBaySAC (Bayes SAmple Consensus), that fuses the BaySAC algorithm with candidate model parameters statistical testing for unorganized 3D point clouds to fit multiple primitives. This paper first presents a statistical testing algorithm for a candidate model parameter histogram to detect potential primitives. As the detected initial primitives were optimized using a parallel strategy rather than a sequential one, every data point in the multiBaySAC algorithm was assigned to multiple prior inlier probabilities for initial multiple primitives. Each prior inlier probability determined the probability that a point belongs to the corresponding primitive. We then implemented in parallel a conditional sampling method: BaySAC. With each iteration of the hypothesis testing process, hypothesis sets with the highest inlier probabilities were selected and verified for the existence of multiple primitives, revealing the fitting for multiple primitives. Moreover, the updated version of the initial probability was implemented based on a memorable form of Bayes’ Theorem, which describes the relationship between prior and posterior probabilities of a data point by determining whether the hypothesis set to which a data point belongs is correct. The proposed approach was tested using real and synthetic point clouds. The results show that the proposed multiBaySAC algorithm can achieve a high computational efficiency (averaging 34% higher than the efficiency of the sequential RANSAC method) and fitting accuracy (exhibiting good performance in the intersection of two primitives), whereas the sequential RANSAC framework clearly suffers from over- and under-segmentation problems. Future work will aim at further

  4. A primitive caprine from the Upper Vallesian of La Roma 2 (Alfambra, Teruel, Aragon, Spain)

    NASA Astrophysics Data System (ADS)

    Alcalá, Luis; Morales, Jorge

    1997-06-01

    We describe a new caprine form from the Upper Vallesian of La Roma 2 (Teruel Basin, Aragon). Aragoral mudejar Gen.n., sp.n. is close to the primitive forms of the Hippotraginae-Caprinae group. It differs from Norbertia hellenica by its more primitive dentition, the greater separation between the bases of the horn cores, the decreased thickness of the frontal bone and the relatively smaller size of the horn cores.

  5. Risk of Esophageal Cancer Following Percutaneous Endoscopic Gastrostomy in Head and Neck Cancer Patients

    PubMed Central

    Lin, Kuen-Tze; Lin, Chun-Shu; Lee, Shih-Yu; Huang, Wen-Yen; Chang, Wei-Kuo

    2016-01-01

    Abstract Esophageal cancers account for majority of synchronous or metachronous head and neck cancers. This study examined the risk of esophageal cancer following percutaneous endoscopic gastrostomy (PEG) in head and neck cancer patients using the Taiwan National Health Insurance Research Database. From 1997 to 2010, we identified and analyzed 1851 PEG patients and 3702 sex-, age-, and index date-matched controls. After adjusting for esophagitis, esophagus stricture, esophageal reflux, and primary sites, the PEG cohort had a higher adjusted hazard ratio (2.31, 95% confidence interval [CI] = 1.09–4.09) of developing esophageal cancer than the controls. Primary tumors in the oropharynx, hypopharynx, and larynx were associated with higher incidence of esophageal cancer. The adjusted hazard ratios were 1.49 (95% CI = 1.01–1.88), 3.99 (95% CI = 2.76–4.98), and 1.98 (95% CI = 1.11–2.76), respectively. Head and neck cancer patients treated with PEG were associated with a higher risk of developing esophageal cancer, which could be fixed by surgically placed tubes. PMID:26945412

  6. Statistical Mechanics of the Shallow Water and Primitive Equations

    NASA Astrophysics Data System (ADS)

    Potters, M.; Bouchet, F.

    2012-04-01

    Geophysical flows are highly turbulent, yet embody large-scale coherent structures, such as ocean rings, jets, and large-scale circulations. Understanding how these structures appear and predicting their shape are major theoretical challenges. The statistical mechanics approach to geophysical flows is a powerful complement to more conventional theoretical and numerical methods [1]. In the inertial limit, it allows to describe, with only a few thermodynamical parameters, the long-time behavior of the largest scales of the flow. Recent studies in quasi-geostrophic models provide encouraging results: a model of the Great Red Spot of Jupiter [2], an explanation of the drift properties of ocean rings [3], the inertial structure of mid-basin eastward jets [3], bistability phenomena in complex turbulent flows [4], and so on. Generalization to more comprehensive hydrodynamical models, which include gravity wave dynamics and allow for the possibility of energy transfer through wave motion, would be extremely interesting. Namely, both are essential in understanding the geophysical flow energy balance. However, due to difficulties in essential theoretical parts of the statistical mechanics approach, previous methods describing statistical equilibria were up to now limited to the use of quasi-geostrophic models. The current study fills this gap. The new theory we propose describes geophysical phenomena using statistical mechanics applied to the shallow water model, and is easily generalizable to the primitive equations. Invariant measures of the shallow water model are built based on the Hamiltonian structure and the Liouville theorem. In parallel with the development of the theory, we devised an algorithm based on the Creutz algorithm [5] (a generalization of Metropolis-Hastings algorithm) in order to sample microcanonical measures. Numerical simulations are compared with the theoretical predictions [6]. We apply these new tools in order to describe vortex solutions similar

  7. Statistical Mechanics of the Shallow Water and Primitive Equations

    NASA Astrophysics Data System (ADS)

    Potters, M.; Bouchet, F.

    2011-12-01

    Geophysical flows are highly turbulent, yet embody large-scale coherent structures, such as ocean rings, jets, and large-scale circulations. Understanding how these structures appear and predicting their shape are major theoretical challenges. The statistical mechanics approach to geophysical flows is a powerful complement to more conventional theoretical and numerical methods [1]. In the inertial limit, it allows to describe, with only a few thermodynamical parameters, the long-time behavior of the largest scales of the flow. Recent studies with quasi-geostrophic models provide encouraging results: a model of the Great Red Spot of Jupiter [2], an explanation of the drift properties of ocean rings [3], the inertial structure of mid-basin eastward jets [3], bistability phenomena in complex turbulent flows [4], and so on. Generalization to more comprehensive hydrodynamical models, which include gravity wave dynamics and the possibility of energy transfer through wave motion, would be extremely interesting. Namely, both are essential in understanding the geophysical flow energy balance. However, due to difficulties in essential theoretical parts of the statistical mechanics approach, previous methods describing statistical equilibria were up to now limited to the use of quasi-geostrophic models. The current study fills this gap. The new theory we propose describes geophysical phenomena using statistical mechanics applied to the shallow water model, and is easily generalizable to the primitive equations. Invariant measures of the shallow water model are built based on the Hamiltonian structure and the Liouville theorem. In parallel with the development of the theory, we devised an algorithm based on the Creutz algorithm [5] (a generalization of Metropolis-Hastings algorithm) in order to sample microcanonical measures. Numerical simulations are compared with the theoretical predictions [6]. We apply these new tools in order to describe vortex solutions similar to the

  8. Balanced motor primitive can explain generalization of motor learning effects between unimanual and bimanual movements

    NASA Astrophysics Data System (ADS)

    Takiyama, Ken; Sakai, Yutaka

    2016-03-01

    Motor learning in unimanual and bimanual planar reaching movements has been intensively investigated. Although distinct theoretical frameworks have been proposed for each of these reaching movements, the relationship between these movements remains unclear. In particular, the generalization of motor learning effects (transfer of learning effects) between unimanual and bimanual movements has yet to be successfully explained. Here, by extending a motor primitive framework, we analytically proved that the motor primitive framework can reproduce the generalization of learning effects between unimanual and bimanual movements if the mean activity of each primitive for unimanual movements is balanced to the mean for bimanual movements. In this balanced condition, the activity of each primitive is consistent with previously reported neuronal activity. The unimanual-bimanual balance leads to the testable prediction that generalization between unimanual and bimanual movements is more widespread to different reaching directions than generalization within respective movements. Furthermore, the balanced motor primitive can reproduce another previously reported phenomenon: the learning of different force fields for unimanual and bimanual movements.

  9. Identifying and modeling motion primitives for the hydromedusae Sarsia tubulosa and Aequorea victoria.

    PubMed

    Sledge, Isaac; Krieg, Michael; Lipinski, Doug; Mohseni, Kamran

    2015-12-01

    The movements of organisms can be thought of as aggregations of motion primitives: motion segments containing one or more significant actions. Here, we present a means to identify and characterize motion primitives from recorded movement data. We address these problems by assuming that the motion sequences can be characterized as a series of dynamical-system-based pattern generators. By adopting a nonparametric, Bayesian formalism for learning and simplifying these pattern generators, we arrive at a purely data-driven model to automatically identify breakpoints in the movement sequences. We apply this model to swimming sequences from two hydromedusa. The first hydromedusa is the prolate Sarsia tubulosa, for which we obtain five motion primitives that correspond to bell cavity pressurization, jet formation, jetting, cavity fluid refill, and coasting. The second hydromedusa is the oblate Aequorea victoria, for which we obtain five motion primitives that correspond to bell compression, vortex separation, cavity fluid refill, vortex formation, and coasting. Our experimental results indicate that the breakpoints between primitives are correlated with transitions in the bell geometry, vortex formation and shedding, and changes in derived dynamical quantities. These dynamics quantities include terms like pressure, power, drag, and thrust. Such findings suggest that dynamics information is inherently present in the observed motions. PMID:26495992

  10. Balanced motor primitive can explain generalization of motor learning effects between unimanual and bimanual movements

    PubMed Central

    Takiyama, Ken; Sakai, Yutaka

    2016-01-01

    Motor learning in unimanual and bimanual planar reaching movements has been intensively investigated. Although distinct theoretical frameworks have been proposed for each of these reaching movements, the relationship between these movements remains unclear. In particular, the generalization of motor learning effects (transfer of learning effects) between unimanual and bimanual movements has yet to be successfully explained. Here, by extending a motor primitive framework, we analytically proved that the motor primitive framework can reproduce the generalization of learning effects between unimanual and bimanual movements if the mean activity of each primitive for unimanual movements is balanced to the mean for bimanual movements. In this balanced condition, the activity of each primitive is consistent with previously reported neuronal activity. The unimanual-bimanual balance leads to the testable prediction that generalization between unimanual and bimanual movements is more widespread to different reaching directions than generalization within respective movements. Furthermore, the balanced motor primitive can reproduce another previously reported phenomenon: the learning of different force fields for unimanual and bimanual movements. PMID:27025168

  11. Intrapartum Synthetic Oxytocin Reduce the Expression of Primitive Reflexes Associated with Breastfeeding

    PubMed Central

    Olza Fernández, Ibone; Malalana Martínez, Ana M.; González Armengod, Carmen; Costarelli, Valeria; Millán Santos, Isabel; Fernández-Cañadas Morillo, Aurora; Pérez Riveiro, Pilar; López Sánchez, Francisco; García Murillo, Lourdes

    2015-01-01

    Abstract Aim: Several synthetic peptide manipulations during the time surrounding birth can alter the specific neurohormonal status in the newborn brain. This study is aimed at assessing whether intrapartum oxytocin administration has any effect on primitive neonatal reflexes and determining whether such an effect is dose-dependent. Materials and Methods: A cohort prospective study was conducted at a tertiary hospital. Mother–infant dyads who received intrapartum oxytocin (n=53) were compared with mother–infant dyads who did not receive intrapartum oxytocin (n=45). Primitive neonatal reflexes (endogenous, antigravity, motor, and rhythmic reflexes) were quantified by analyzing videotaped breastfeeding sessions in a biological nurturing position. Two observers blind to the group assignment and the oxytocin dose analyzed the videotapes and assesed the newborn's state of consciousness according to the Brazelton scale. Results: The release of all rhythmic reflexes (p=0.01), the antigravity reflex (p=0.04), and total primitive neonatal reflexes (p=0.02) in the group exposed to oxytocin was lower than in the group not exposed to oxytocin. No correlations were observed between the dose of oxytocin administered and the percentage of primitive neonatal reflexes released (r=0.03; p=0.82). Conclusions: Intrapartum oxytocin administration might inhibit the expression of several primitive neonatal reflexes associated with breastfeeding. This correlation does not seem to be dose-dependent. PMID:25785487

  12. Ets2-dependent trophoblast signalling is required for gastrulation progression after primitive streak initiation.

    PubMed

    Polydorou, Christiana; Georgiades, Pantelis

    2013-01-01

    Although extraembryonic ectoderm trophoblast signals the embryo for primitive streak initiation, a prerequisite for gastrulation, it is unknown whether it also signals for the progression of gastrulation after primitive streak initiation. Here, using Ets2-/- mice, we show that trophoblast signalling is also required in vivo for primitive streak elongation, completion of intraembryonic mesoderm epithelial-mesenchymal transition and the development of anterior primitive streak derivatives such as the node. We show that Ets2-dependent trophoblast signalling is required for the maintenance of high levels of Nodal and Wnt3 expression in the epiblast and for the induction of Snail expression in the primitive streak, between embryonic day 6.3 and 6.7. Within extraembryonic ectoderm trophoblast, Ets2 maintains the expression of the transcription factors Elf5, Cdx2 and Eomes, and that of the signalling molecule Bmp4. We propose a model that provides a genetic explanation as to how Ets2 in trophoblast mediates the progression of gastrulation within the epiblast. PMID:23552073

  13. Mutation profiles of synchronous colorectal cancers from a patient with Lynch syndrome suggest distinct oncogenic pathways

    PubMed Central

    Shi, Chanjuan; Holt, Jonathan A.; Vnencak-Jones, Cindy L.

    2016-01-01

    Patients with Lynch syndrome often present with multiple synchronous or metachronous colorectal cancers (CRCs). The presence of multiple CRCs with distinct genetic profiles and driver mutations could complicate treatment as each cancer may respond differently to therapy. Studies of sporadic CRCs suggested that synchronous tumors have distinct etiologies, but could not rule out differences in genetic background. The presence of multiple cancers in a patient with a predisposing mutation provides an opportunity to profile synchronous cancers in the same genetic background. Here, we describe the case of a patient with Lynch syndrome that presented with six synchronous CRCs. Microsatellite instability (MSI) and genomic profiling indicated that each lesion had a unique pattern of instability and a distinct profile of affected genes. These findings support the idea that in Lynch syndrome, synchronous CRCs can develop in parallel with distinct mutation profiles and that these differences may inform treatment decisions. PMID:27284491

  14. Mutation profiles of synchronous colorectal cancers from a patient with Lynch syndrome suggest distinct oncogenic pathways.

    PubMed

    Wheeler, Scott R; Shi, Chanjuan; Holt, Jonathan A; Vnencak-Jones, Cindy L

    2016-06-01

    Patients with Lynch syndrome often present with multiple synchronous or metachronous colorectal cancers (CRCs). The presence of multiple CRCs with distinct genetic profiles and driver mutations could complicate treatment as each cancer may respond differently to therapy. Studies of sporadic CRCs suggested that synchronous tumors have distinct etiologies, but could not rule out differences in genetic background. The presence of multiple cancers in a patient with a predisposing mutation provides an opportunity to profile synchronous cancers in the same genetic background. Here, we describe the case of a patient with Lynch syndrome that presented with six synchronous CRCs. Microsatellite instability (MSI) and genomic profiling indicated that each lesion had a unique pattern of instability and a distinct profile of affected genes. These findings support the idea that in Lynch syndrome, synchronous CRCs can develop in parallel with distinct mutation profiles and that these differences may inform treatment decisions. PMID:27284491

  15. Cytoreductive Surgery plus HIPEC for Peritoneal Metastases from Colorectal Cancer.

    PubMed

    Bhatt, Aditi; Goéré, Diane

    2016-06-01

    Occurring either synchronously or metachronously to the primary tumor, peritoneal metastases (PM) are diagnosed in 8 to 20 % of the patients with colorectal cancer (CRC). Prognosis of these patients appears to be worse than those with other sites of metastases. While systemic therapy has shown significant prolongation of survival in patients with stage IV colorectal cancer, the outcomes in the subset of patients with PM has been much inferior. Over the last 2 decades, cytoreductive surgery (CRS) followed by hyperthermic intraperitoneal chemotherapy (HIPEC) have been effective in substantially prolonging survival in patients with colorectal PM and have the potential to cure certain patients as well. This article reviews the current evidence for CRS and HIPEC to treat colorectal PM as well as future research going on in this form of locoregional treatment. PMID:27065708

  16. Method for concurrent execution of primitive operations by dynamically assigning operations based upon computational marked graph and availability of data

    NASA Technical Reports Server (NTRS)

    Stoughton, John W. (Inventor); Mielke, Roland V. (Inventor)

    1990-01-01

    Computationally complex primitive operations of an algorithm are executed concurrently in a plurality of functional units under the control of an assignment manager. The algorithm is preferably defined as a computationally marked graph contianing data status edges (paths) corresponding to each of the data flow edges. The assignment manager assigns primitive operations to the functional units and monitors completion of the primitive operations to determine data availability using the computational marked graph of the algorithm. All data accessing of the primitive operations is performed by the functional units independently of the assignment manager.

  17. Primary process thinking, primitive defensive operations and object relationships in borderline and neurotic patients.

    PubMed

    Leichsenring, F

    1991-01-01

    In the present paper Kernberg's hypothesis concerning the connection between primary process thinking on the one hand and primitive defense mechanisms and modes of object relationships on the other hand were tested empirically in a sample of 30 hospitalized borderline and 30 hospitalized neurotic patients. The diagnoses of the patients were given according to the 'Diagnostic Interview for Borderlines' of Gunderson and Kolb, the functions mentioned above were assessed on the basis of the Holtzman Inkblot Technique applying scoring systems of Lerner and coworkers for primitive defense mechanisms and of Urist for the scoring of object relationships to the Holtzman Inkblot Technique. According to the results the hypothesis derived from assumptions of Kernberg could be corroborated. Primary process thinking in borderline patients seems to be closely connected with high levels of anxiety and hostility, projective identification/projection, primitive denial and sadomasochistic relationships. A model for the coming about of primary process thinking in borderline patients is proposed. PMID:2023983

  18. Global Strong Well-Posedness of the Three Dimensional Primitive Equations in {L^p}-Spaces

    NASA Astrophysics Data System (ADS)

    Hieber, Matthias; Kashiwabara, Takahito

    2016-09-01

    In this article, an {L^p}-approach to the primitive equations is developed. In particular, it is shown that the three dimensional primitive equations admit a unique, global strong solution for all initial data {a in [X_p,D(A_p)]_{1/p}} provided {p in [6/5,infty)}. To this end, the hydrostatic Stokes operator {A_p} defined on {X_p}, the subspace of {L^p} associated with the hydrostatic Helmholtz projection, is introduced and investigated. Choosing {p} large, one obtains global well-posedness of the primitive equations for strong solutions for initial data {a} having less differentiability properties than {H^1}, hereby generalizing in particular a result by Cao and Titi (Ann Math 166:245-267, 2007) to the case of non-smooth initial data.

  19. Endocranial preservation of a Carboniferous actinopterygian from Lancashire, UK, and the interrelationships of primitive actinopterygians

    PubMed Central

    Coates, M. I.

    1999-01-01

    The gross brain structure of an Upper Carboniferous (ca. 310 Myr ago) ray-finned fish (Actinopterygii) is described from exceptionally well-preserved fossil material from the Burnley region of Lancashire, UK. Previously identified as 'Rhadinichthys' planti, the species is reassigned to the genus Mesopoma. Morphological characters derived from these data are combined with reviews of cranial skeletal anatomy, enamel composition, oculomoter muscle insertion and paired fin morphology to test and reanalyse hypotheses of primitive actinopterygian interrelationships. Results indicate that ancestral chondrostean (sturgeon and paddlefish) and neopterygian (teleost, amiid and gar) lineages diverged earlier than current theories suggest. Palaeonisciformes, a taxonomic group widely used to include most Palaeozoic actinopterygians, include a significant number of primitive neopterygians, several of which may form a distinct monophyletic clade. Within this revised phylogenetic context, changes in gross brain morphology from primitive conditions, as revealed by fossil data, highlight likely specializations in extant non-teleostean actinopterygians.

  20. CT and MRI Findings in a Rare Case of Renal Primitive Neuroectodermal Tumor

    PubMed Central

    Akkaya, Zehra; Peker, Elif; Gulpinar, Basak; Karadag, Hale; Erden, Ayse

    2016-01-01

    Summary Background Primary renal primitive neuroectodermal tumor/extraskeletal Ewing’s sarcoma (PNET/EES) is a very rare renal tumor. Case Report We report a case of primary renal PNET/EES of the kidney in an adult patient and describe its computed tomography and magnetic resonance imaging findings, including diffusion weighted images along with a review of the current medical literature. Conclusions Although very rare, a relatively large renal mass which shows very infiltrative growth pattern on CT and MR imaging and striking diffusion restriction should raise the suspicion of a renal primitive neuroectodermal tumor, in a young adult.

  1. Hydrazines and carbohydrazides produced from oxidized carbon in earth's primitive environment

    NASA Technical Reports Server (NTRS)

    Folsome, C. E.; Brittain, A.; Smith, A.; Chang, S.

    1981-01-01

    Whether abiological organic compounds can be formed from the interactions of energy sources with nitrogen, oxidized carbon and water is held to be of importance in geochemical models of the primordial earth atmosphere. It is reported that experiments using quenched spark discharges through molecular nitrogen on aqueous suspensions of CaCO3 and other reactants to simulate the hydrosphere/atmosphere interface yield hydrazine and carbohydrazine in significant but low yields. Such reactions in primitive aquatic environments may have supplied a pathway for chemical evolution and the origin of life, on a primitive earth in which fully oxidized states of carbon were available for the primary synthesis of organic matter.

  2. Beta operations: efficient implementation of a primitive parallel operation. Technical report

    SciTech Connect

    Cohn, E.R.; Haddad, R.W.

    1986-08-01

    The ever-decreasing cost of computer processors has created a great interest in multi-processor computers. However, along with the increased power that this parallelism brings comes increased complexity in programming. One approach to lessening this complexity is to provide the programmer with general-purpose parallel primitives that shield him from the structure of the underlying machine. In The Connection Machine, Hillis suggests the beta operation as a parallel primitive for his hypercube-based machine. This paper explores efficient ways to perform this operation on several different well known architectures, including the hypercube. It presents some lower bounds associated with the problem.

  3. Outcomes in Patients With Early-Stage Hypopharyngeal Cancer Treated With Radiotherapy

    SciTech Connect

    Yoshimura, Ryo-ichi; Kagami, Yoshikazu; Ito, Yoshinori; Asai, Masao; Mayahara, Hiroshi; Sumi, Minako; Itami, Jun

    2010-07-15

    Purpose: To analyze the outcome in patients with early-stage hypopharyngeal cancer (HPC) who were treated with radiotherapy (RT). Methods and Materials: Between February 1988 and February 2007, 77 patients with Stage I or Stage II HPC underwent definitive RT in the Division of Radiation Oncology at the National Cancer Center Hospital. Eleven of the patients received local irradiation, and the other 66 patients received elective bilateral neck irradiation and booster irradiation to the primary lesion. The median follow-up period for all the patients was 33 months from the start of RT, ranging from 3 to 229 months. Results: The rates of overall survival, HPC-specific survival, HPC recurrence-free survival, and local control with laryngeal voice preservation for the 77 patients at 5 years were 47%, 74%, 57%, and 70%, respectively. The survival rates were not affected by the patient characteristics or treatment factors, but the RT field was significantly correlated with local control in a multivariate analysis. Seven of the patients had Grade 3 or greater complications, but these complications occurred after salvage surgery in 6 of the patients. Of the 77 patients, 83% had synchronous or metachronous malignancies, but these malignancies did not influence the survival of the patients if the malignancies were detected at an early stage. Conclusion: RT is an appropriate treatment method for early-stage HPC. However, because synchronous or metachronous malignancies occur at a relatively high frequency, careful follow-up and the early detection of such malignancies are critical.

  4. Targeting Polyamines and Inflammation for Cancer Prevention

    PubMed Central

    Babbar, Naveen; Gerner, Eugene W.

    2013-01-01

    Increased polyamine synthesis and inflammation have long been associated with intraepithelial neoplasia, which are risk factors for cancer development in humans. Targeting polyamine metabolism (by use of polyamine synthesis inhibitors or polyamine catabolism activators) and inflammation (by use of nonsteroidal anti-inflammatory drugs) has been studied for many cancers, including colon, prostate, and skin. Genetic epidemiology results indicate that a genetic variant associated with the expression of a polyamine biosynthetic gene is associated with risk of colon and prostate cancers. A clinical trial of difluoromethylornithine (DFMO), a selective inhibitor of polyamine synthesis, showed that the 1 year treatment duration reduced prostate volume and serum prostate-specific antigen doubling time in men with a family history of prostate cancer. A second, clinical trial of DFMO in combination with sulindac, a NSAID in patients with prior colon polyps found that the 3-year treatment was associated with a 70% reduction of all, and over a 90% reduction of advanced and/or multiple metachronous colon adenomas. In this chapter, we discuss that similar combination prevention strategies of targeting polyamines and inflammation can be effective in reducing risk factors associated with the development of human cancers. PMID:21253788

  5. Circulating metastasis associated in colon cancer 1 transcripts in gastric cancer patient plasma as diagnostic and prognostic biomarker

    PubMed Central

    Burock, Susen; Herrmann, Pia; Wendler, Ina; Niederstrasser, Markus; Wernecke, Klaus-Dieter; Stein, Ulrike

    2015-01-01

    AIM: To evaluate the diagnostic and prognostic value of circulating Metastasis Associated in Colon Cancer 1 (MACC1) transcripts in plasma of gastric cancer patients. METHODS: We provide for the first time a blood-based assay for transcript quantification of the metastasis inducer MACC1 in a prospective study of gastric cancer patient plasma. MACC1 is a strong prognostic biomarker for tumor progression and metastasis in a variety of solid cancers. We conducted a study to define the diagnostic and prognostic power of MACC1 transcripts using 76 plasma samples from gastric cancer patients, either newly diagnosed with gastric cancer, newly diagnosed with metachronous metastasis of gastric cancer, as well as follow-up patients. Findings were controlled by using plasma samples from 54 tumor-free volunteers. Plasma was separated, RNA was isolated, and levels of MACC1 as well as S100A4 transcripts were determined by quantitative RT-PCR. RESULTS: Based on the levels of circulating MACC1 transcripts in plasma we significantly discriminated tumor-free volunteers and gastric cancer patients (P < 0.001). Levels of circulating MACC1 transcripts were increased in gastric cancer patients of each disease stage, compared to tumor-free volunteers: patients with tumors without metastasis (P = 0.005), with synchronous metastasis (P = 0.002), with metachronous metastasis (P = 0.005), and patients during follow-up (P = 0.021). Sensitivity was 0.68 (95%CI: 0.45-0.85) and specificity was 0.89 (95%CI: 0.77-0.95), respectively. Importantly, gastric cancer patients with high circulating MACC1 transcript levels in plasma demonstrated significantly shorter survival when compared with patients demonstrating low MACC1 levels (P = 0.0015). Furthermore, gastric cancer patients with high circulating transcript levels of MACC1 as well as of S100A4 in plasma demonstrated significantly shorter survival when compared with patients demonstrating low levels of both biomarkers or with only one biomarker

  6. Unusual persistent primitive trigeminal artery with a superior duplicated basilar system.

    PubMed

    Mohammad, Laila Malani; Carlson, Andrew Phillip

    2016-07-01

    A 67-year-old patient who presented with a right cerebellar hemorrhage underwent vascular workup for suspicion of underlying vascular anomalies. A diagnostic cerebral angiogram demonstrated a duplicated basilar system fed solely by a persistent primitive trigeminal artery. The findings proved to be incidental and unrelated to the patient's hemorrhage. These developmental abnormalities are consistent with embryological development. PMID:26404778

  7. Osmium Isotopic Compositions of Chondrites and Earth's Primitive Upper Mantle: Constraints on the Late Veneer

    NASA Technical Reports Server (NTRS)

    Walker, R. J.; Horan, M. F.; Morgan, J. W.; Meisel, T.

    2001-01-01

    The 187 Os/188 Os of carbonaceous chondrites averages approximately 2% lower than for enstatite and ordinary chondrites. The primitive upper mantle ratio for the Earth best matches that of ordinary and enstatite chondrites. Additional information is contained in the original extended abstract.

  8. Registration of RMPAP-C4, a random-mated primitive race accession cotton germplasm population

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A random mated population involving four cultivars of Upland cotton, Gossypium hirsutum L., and thirty day-neutral primitive accessions, RMPAP-C4, was developed and jointly released by USDA-ARS and the Mississippi Agricultural and Forestry Experiment Station in 2014. This population involved five c...

  9. A primitive pseudo wave equation formulation for solving the harmonic shallow water equations

    NASA Astrophysics Data System (ADS)

    Westerink, J. J.; Connor, J. J.; Stolzenbach, K. D.

    A finite element method formulation for solving the harmonic shallow water equations in their primitive or unmodified form is developed and analysed. The scheme, referred to as the Primitive Pseudo Wave Equation Formulation (PPWE), involves developing a weak weighted residual form of the continuity equation and furthermore forming a pseudo wave equation by substituting the discretized form of the momentum equation into the discretized form of the continuity equation. The final set of equations to be solved, the pseudo wave equation and the primitive momentum equations, deceptively resemble the discretized equations of the wave equation formulation of Lynch and Gray. Despite this resemblance, Fourier analysis indicates that the PPWE scheme is still fundamentally primitive. However, application of the PPWE scheme to a set of stringent test problems results in very good solutions with well controlled nodal oscillations. It is shown that this low degree of spurious oscillations is due to the treatment of the boundary conditions such that elevation is taken as an essential condition and normal flux is taken as a natural condition. This particular boundary condition treatment is suggested by the formation of the pseudo wave equation. Furthermore, even though the equation re-arrangement does not in itself effect the solutions, it does make the scheme much more efficient.

  10. Search for primitive Methanopyrus based on genetic distance between Val- and Ile-tRNA synthetases.

    PubMed

    Yu, Zhiliang; Takai, Ken; Slesarev, Alexei; Xue, Hong; Wong, J Tze-Fei

    2009-10-01

    Since evidence indicates that the Last Universal Common Ancestor (LUCA) was phylogenetically closest to Methanopyrus kandleri among living organisms with elucidated genomes, this study has been directed to a search for the most primitive Methanopyrus lineage. For this purpose, the divergence of valyl-tRNA synthetase (ValRS) and isoleucyl-tRNA synthetase (IleRS) was employed as a measure of primitivity. Comparison of Methanopyrus kandleri and the Methanopyrus isolates GC34 and GC37 from the Pacific Ocean and KOL6, TAG1, TAG11, and SNP6 from the Atlantic Ocean established that the Pacific lineages are more primitive than the Atlantic lineages. Both the groups, however, are younger than environmental genomes from the Kairei Field of Central Indian Ridge in the Indian Ocean. These results showed that different Methanopyrus isolates differ significantly with respect to ValRS-IleRS divergence. On this basis, genomes giving rise to the ValRS and IleRS gene fragments from the Central Indian Ridge represent the most primitive Methanopyrus, phylogenetically the oldest living lineage closest to LUCA. PMID:19841848

  11. Generation of primitive neural stem cells from human fibroblasts using a defined set of factors

    PubMed Central

    Miura, Takumi; Sugawara, Tohru; Fukuda, Atsushi; Tamoto, Ryo; Kawasaki, Tomoyuki; Umezawa, Akihiro; Akutsu, Hidenori

    2015-01-01

    ABSTRACT In mice, leukemia inhibitory factor (LIF)-dependent primitive neural stem cells (NSCs) have a higher neurogenic potential than bFGF-dependent definitive NSCs. Therefore, expandable primitive NSCs are required for research and for the development of therapeutic strategies for neurological diseases. There is a dearth of suitable techniques for the generation of human long-term expandable primitive NSCs. Here, we have described a method for the conversion of human fibroblasts to LIF-dependent primitive NSCs using a strategy based on techniques for the generation of induced pluripotent stem cells (iPSCs). These LIF-dependent induced NSCs (LD-iNSCs) can be expanded for >100 passages. Long-term cultured LD-iNSCs demonstrated multipotent neural differentiation potential and could generate motor neurons and dopaminergic neurons, as well as astrocytes and oligodendrocytes, indicating a high level of plasticity. Furthermore, LD-iNSCs easily reverted to human iPSCs, indicating that LD-iNSCs are in an intermediate iPSC state. This method may facilitate the generation of patient-specific human neurons for studies and treatment of neurodegenerative diseases. PMID:26490674

  12. Automatic modelling of building façade objects via primitive shapes

    NASA Astrophysics Data System (ADS)

    Hetti Arachchige, N.; Perera, S.

    2014-08-01

    This paper presents a new approach to recognize individual façade objects and to reconstruct such objects in 3D using MLS point clouds. Core of the approach is a primitive shape based algorithm, which introduces building primitives, to identify the façade objects separately from other irrelevant objects and then to model the correct topology. The primitive shape is identified against defined different primitive shapes by using the Douglas-Peucker algorithm. The advantage of this process is that it offers an ability not only to model correct geometric shapes but also to remove occlusion effects from the final model. To evaluate the validity of the proposed approach, experiments have been conducted using two types of street scene point clouds captured by Optech Lynx Mobile Mapper System and Z+F laser scanner. Results of the experiments show that the completeness, correctness, and quality of the reconstructed building façade objects are well over 90 %, proving the proposed method is a promising solution for modelling 3D façade objects with different geometric shapes.

  13. Erythropoietin production in neuroepithelial and neural crest cells during primitive erythropoiesis.

    PubMed

    Suzuki, Norio; Hirano, Ikuo; Pan, Xiaoqing; Minegishi, Naoko; Yamamoto, Masayuki

    2013-01-01

    Erythropoietin (Epo) supports both primitive erythropoiesis in the yolk sac and definitive erythropoiesis in the fetal liver and bone marrow. Although definitive erythropoiesis requires kidney- and liver-secreted Epo, it is unclear which cells produce Epo for primitive erythropoiesis. Here we find neural Epo-producing (NEP) cells in mid-gestational stage embryos using mouse lines that express green fluorescent protein (GFP) under the Epo gene regulation. In these mice, GFP is expressed exclusively in a subpopulation of neural and neural crest cells at embryonic day 9.0 when Epo-deficient embryos exhibit abnormalities in primitive erythropoiesis. The GFP-positive NEP cells express Epo mRNA and the ex vivo culture of embryonic day 8.5 neural tubes results in the secretion of Epo, which is able to induce the proliferation and differentiation of yolk sac-derived erythroid cells. These results thus suggest that NEP cells secrete Epo and might support the development of primitive erythropoiesis. PMID:24309470

  14. Spatio-temporal articulatory movement primitives during speech production: extraction, interpretation, and validation.

    PubMed

    Ramanarayanan, Vikram; Goldstein, Louis; Narayanan, Shrikanth S

    2013-08-01

    This paper presents a computational approach to derive interpretable movement primitives from speech articulation data. It puts forth a convolutive Nonnegative Matrix Factorization algorithm with sparseness constraints (cNMFsc) to decompose a given data matrix into a set of spatiotemporal basis sequences and an activation matrix. The algorithm optimizes a cost function that trades off the mismatch between the proposed model and the input data against the number of primitives that are active at any given instant. The method is applied to both measured articulatory data obtained through electromagnetic articulography as well as synthetic data generated using an articulatory synthesizer. The paper then describes how to evaluate the algorithm performance quantitatively and further performs a qualitative assessment of the algorithm's ability to recover compositional structure from data. This is done using pseudo ground-truth primitives generated by the articulatory synthesizer based on an Articulatory Phonology frame-work [Browman and Goldstein (1995). "Dynamics and articulatory phonology," in Mind as motion: Explorations in the dynamics of cognition, edited by R. F. Port and T.van Gelder (MIT Press, Cambridge, MA), pp. 175-194]. The results suggest that the proposed algorithm extracts movement primitives from human speech production data that are linguistically interpretable. Such a framework might aid the understanding of longstanding issues in speech production such as motor control and coarticulation. PMID:23927134

  15. Primitive Liquid Water of the Solar System in an Aqueous Altered Carbonaceous Chondrite

    NASA Technical Reports Server (NTRS)

    Tsuchiyama, A.; Miyake, A.; Kitayama, A.; Matsuno, J.; Takeuchi, A.; Uesugi, K.; Suzuki, Y.; Nakano, T.; Zolensky, M. E.

    2016-01-01

    Non-destructive 3D observations of the aqueous altered CM chondrite Sutter's Mill using scanning imaging x-ray microscopy (SIXM) showed that some of calcite and enstatite grains contain two-phase inclusion, which is most probably composed of liquid water and bubbles. This water should be primitive water responsible for aqueous alteration in an asteroid in the early solar system.

  16. Spatio-temporal articulatory movement primitives during speech production: Extraction, interpretation, and validation

    PubMed Central

    Ramanarayanan, Vikram; Goldstein, Louis; Narayanan, Shrikanth S.

    2013-01-01

    This paper presents a computational approach to derive interpretable movement primitives from speech articulation data. It puts forth a convolutive Nonnegative Matrix Factorization algorithm with sparseness constraints (cNMFsc) to decompose a given data matrix into a set of spatiotemporal basis sequences and an activation matrix. The algorithm optimizes a cost function that trades off the mismatch between the proposed model and the input data against the number of primitives that are active at any given instant. The method is applied to both measured articulatory data obtained through electromagnetic articulography as well as synthetic data generated using an articulatory synthesizer. The paper then describes how to evaluate the algorithm performance quantitatively and further performs a qualitative assessment of the algorithm's ability to recover compositional structure from data. This is done using pseudo ground-truth primitives generated by the articulatory synthesizer based on an Articulatory Phonology frame-work [Browman and Goldstein (1995). “Dynamics and articulatory phonology,” in Mind as motion: Explorations in the dynamics of cognition, edited by R. F. Port and T.van Gelder (MIT Press, Cambridge, MA), pp. 175–194]. The results suggest that the proposed algorithm extracts movement primitives from human speech production data that are linguistically interpretable. Such a framework might aid the understanding of longstanding issues in speech production such as motor control and coarticulation. PMID:23927134

  17. Experimentally Testing the Hypothesis of a Limited Amino Acid Repertoire in Primitive Proteins

    NASA Astrophysics Data System (ADS)

    Akanuma, S.; Nakajima, Y.; Yokobori, S.; Yamagishi, A.

    2013-11-01

    It has been argued that a fewer amino acids were used in primitive proteins and later the repertoire increased up to 20. To test this hypothesis experimentally, we restricted the amino acid usage of a reconstructed, ancestral protein to reduced sets.

  18. Primitive Reflexes and Attention-Deficit/Hyperactivity Disorder: Developmental Origins of Classroom Dysfunction

    ERIC Educational Resources Information Center

    Taylor, Myra; Houghton, Stephen; Chapman, Elaine

    2004-01-01

    The present research studied the symptomatologic overlap of AD/HD behaviours and retention of four primitive reflexes (Moro, Tonic Labyrinthine Reflex [TLR], Asymmetrical Tonic Neck Reflex [ATNR], Symmetrical Tonic Neck Reflex [STNR]) in 109 boys aged 7-10 years. Of these, 54 were diagnosed with AD/HD, 34 manifested sub-syndromal coordination,…

  19. Supersymmetry algebra cohomology. II. Primitive elements in 2 and 3 dimensions

    SciTech Connect

    Brandt, Friedemann

    2010-11-15

    The primitive elements of the supersymmetry algebra cohomology as defined in a companion paper are computed exhaustively for standard supersymmetry algebras in dimensions D=2 and D=3, for all signatures (t, D-t) and all numbers N of sets of supersymmetries.

  20. Association of flowering time genes with simple sequence repeat markers in a primitive cotton accession (Gossypium hirsutum L.)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Primitive cotton (Gossypium hirsutum L.) race stocks represent resources for genetic improvement for fiber quality, pathogen resistance, and increased tolerance to environment stresses. Most tropical primitive accessions are photoperiod sensitive and do not flower under the long days of the U.S. cot...

  1. Primitive Basalts Record Small-Scale Mantle Heterogeneities in the Lassen Region of the Southern Cascades

    NASA Astrophysics Data System (ADS)

    Wenner, J. M.; Teasdale, R.; Lenz, Q. A.

    2014-12-01

    The Poison Lake chain (PLC), located the Lassen region of the Southern Cascades, encompasses six geochemical, lithological and geographically distinct groups of primitive basalts, defined as MgO >6%, Ni >100 ppm, and Cr >200 ppm. In total, 22 cinder cones and flows of the PLC erupted in a small area (<30 km2) over a very short time frame (100 ka +/- 10 ka). The diversity of primitive compositions in the small spatial and temporal scales provide an ideal area in which to explore variations in mantle compositions that produce primitive basalts in the Lassen Segment of the Cascade Arc. We present major, trace, and isotope data and spinel-olivine compositions that reveal the diversity of mantle domains present in this small area. Chromium compositions of spinel in primitive basalts of the PLC indicate the presence of three distinct mantle sources: (1) depleted with Cr# = 0.44-0.52; (2) enriched with Cr# = 0.2-0.3 and (3) an intermediate composition, with Cr# = 0.4. Major and trace element compositions of PLC primitive basalts confirm the relative differences in depletion and reveal distinctions in the depth of melt generation. REE patterns and trace element ratios indicate variability in the presence of garnet in the source and define the source regions with varying depth. These mantle domains are geographically distributed with depleted compositions (high Cr# spinel, lower incompatible elements) in the northwest part of the PLC, grading to more enriched compositions (low Cr# spinel and higher incompatible elements) in the southeast. Previous workers recognize variations in the Cascadian sub-arc mantle at large scales across and along the arc, and at the scale of individual volcanic centers. However, the small area (30km2) and short timescale (within 10 ka) represented by the primitive basalts of the PLC allow us to hold time and space relatively constant while examining geochemical variations. Using primitive mantle proxy basalts from the PLC, we suggest that mantle

  2. Exome sequencing of contralateral breast cancer identifies metastatic disease.

    PubMed

    Klevebring, Daniel; Lindberg, Johan; Rockberg, Julia; Hilliges, Camilla; Hall, Per; Sandberg, Maria; Czene, Kamila

    2015-06-01

    Women with contralateral breast cancer (CBC) have significantly worse prognosis compared to women with unilateral cancer. A possible explanation of the poor prognosis of patients with CBC is that in a subset of patients, the second cancer is not a new primary tumor but a metastasis of the first cancer that has potentially obtained aggressive characteristics through selection of treatment. Exome and whole-genome sequencing of solid tumors has previously been used to investigate the clonal relationship between primary tumors and metastases in several diseases. In order to assess the relationship between the first and the second cancer, we performed exome sequencing to identify somatic mutations in both first and second cancers, and compared paired normal tissue of 25 patients with metachronous CBC. For three patients, we identified shared somatic mutations indicating a common clonal origin thereby demonstrating that the second tumor is a metastasis of the first cancer, rather than a new primary cancer. Accordingly, these patients all developed distant metastasis within 3 years of the second diagnosis, compared with 7 out of 22 patients with non-shared somatic profiles. Genomic profiling of both tumors help the clinicians distinguish between true CBCs and subsequent metastases. PMID:25922084

  3. New hybrid voxelized/analytical primitive in Monte Carlo simulations for medical applications.

    PubMed

    Bert, Julien; Lemaréchal, Yannick; Visvikis, Dimitris

    2016-05-01

    Monte Carlo simulations (MCS) applied in particle physics play a key role in medical imaging and particle therapy. In such simulations, particles are transported through voxelized phantoms derived from predominantly patient CT images. However, such voxelized object representation limits the incorporation of fine elements, such as artificial implants from CAD modeling or anatomical and functional details extracted from other imaging modalities. In this work we propose a new hYbrid Voxelized/ANalytical primitive (YVAN) that combines both voxelized and analytical object descriptions within the same MCS, without the need to simultaneously run two parallel simulations, which is the current gold standard methodology. Given that YVAN is simply a new primitive object, it does not require any modifications on the underlying MC navigation code. The new proposed primitive was assessed through a first simple MCS. Results from the YVAN primitive were compared against an MCS using a pure analytical geometry and the layer mass geometry concept. A perfect agreement was found between these simulations, leading to the conclusion that the new hybrid primitive is able to accurately and efficiently handle phantoms defined by a mixture of voxelized and analytical objects. In addition, two application-based evaluation studies in coronary angiography and intra-operative radiotherapy showed that the use of YVAN was 6.5% and 12.2% faster than the layered mass geometry method, respectively, without any associated loss of accuracy. However, the simplification advantages and differences in computational time improvements obtained with YVAN depend on the relative proportion of the analytical and voxelized structures used in the simulation as well as the size and number of triangles used in the description of the analytical object meshes. PMID:27032813

  4. New hybrid voxelized/analytical primitive in Monte Carlo simulations for medical applications

    NASA Astrophysics Data System (ADS)

    Bert, Julien; Lemaréchal, Yannick; Visvikis, Dimitris

    2016-05-01

    Monte Carlo simulations (MCS) applied in particle physics play a key role in medical imaging and particle therapy. In such simulations, particles are transported through voxelized phantoms derived from predominantly patient CT images. However, such voxelized object representation limits the incorporation of fine elements, such as artificial implants from CAD modeling or anatomical and functional details extracted from other imaging modalities. In this work we propose a new hYbrid Voxelized/ANalytical primitive (YVAN) that combines both voxelized and analytical object descriptions within the same MCS, without the need to simultaneously run two parallel simulations, which is the current gold standard methodology. Given that YVAN is simply a new primitive object, it does not require any modifications on the underlying MC navigation code. The new proposed primitive was assessed through a first simple MCS. Results from the YVAN primitive were compared against an MCS using a pure analytical geometry and the layer mass geometry concept. A perfect agreement was found between these simulations, leading to the conclusion that the new hybrid primitive is able to accurately and efficiently handle phantoms defined by a mixture of voxelized and analytical objects. In addition, two application-based evaluation studies in coronary angiography and intra-operative radiotherapy showed that the use of YVAN was 6.5% and 12.2% faster than the layered mass geometry method, respectively, without any associated loss of accuracy. However, the simplification advantages and differences in computational time improvements obtained with YVAN depend on the relative proportion of the analytical and voxelized structures used in the simulation as well as the size and number of triangles used in the description of the analytical object meshes.

  5. Learned parametrized dynamic movement primitives with shared synergies for controlling robotic and musculoskeletal systems

    PubMed Central

    Rückert, Elmar; d'Avella, Andrea

    2013-01-01

    A salient feature of human motor skill learning is the ability to exploit similarities across related tasks. In biological motor control, it has been hypothesized that muscle synergies, coherent activations of groups of muscles, allow for exploiting shared knowledge. Recent studies have shown that a rich set of complex motor skills can be generated by a combination of a small number of muscle synergies. In robotics, dynamic movement primitives are commonly used for motor skill learning. This machine learning approach implements a stable attractor system that facilitates learning and it can be used in high-dimensional continuous spaces. However, it does not allow for reusing shared knowledge, i.e., for each task an individual set of parameters has to be learned. We propose a novel movement primitive representation that employs parametrized basis functions, which combines the benefits of muscle synergies and dynamic movement primitives. For each task a superposition of synergies modulates a stable attractor system. This approach leads to a compact representation of multiple motor skills and at the same time enables efficient learning in high-dimensional continuous systems. The movement representation supports discrete and rhythmic movements and in particular includes the dynamic movement primitive approach as a special case. We demonstrate the feasibility of the movement representation in three multi-task learning simulated scenarios. First, the characteristics of the proposed representation are illustrated in a point-mass task. Second, in complex humanoid walking experiments, multiple walking patterns with different step heights are learned robustly and efficiently. Finally, in a multi-directional reaching task simulated with a musculoskeletal model of the human arm, we show how the proposed movement primitives can be used to learn appropriate muscle excitation patterns and to generalize effectively to new reaching skills. PMID:24146647

  6. Synchronous Bilateral Breast Cancers

    PubMed Central

    Subramanyan, Annapurneswari; Radhakrishna, Selvi

    2015-01-01

    Background Bilateral breast cancer (BBC) is not an uncommon entity in contemporary breast clinics. Improved life expectancy after breast cancer treatment and routine use of contra-lateral breast mammography has led to increased incidence of BBC. Our study objective was to define the epidemiological and tumour characteristics of BBC in India. Materials and Methods A total of 1251 breast cancer patients were treated during the period January 2007 to March 2015 and 30 patients were found to have BBC who constituted the study population (60 tumour samples). Synchronous bilateral breast cancers (SBC) was defined as two tumours diagnosed within an interval of 6 months and a second cancer diagnosed after 6 months was labelled as metachronous breast cancer (MBC). Analyses of patient and tumour characteristics were done in this prospective data base of BBC patients. Results Median patient age was 66 years (range 39-85). Majority of the patients had SBC (n=28) and in 12 patients the second tumour was clinically occult and detected only by mammography of the contra-lateral breast. The second tumour was found at lower tumour size compared to the first in 73% of cases and was negative for axillary metastasis in 80% of cases (24/30). Infiltrating ductal carcinoma was the commonest histological type (n=51) and majority of the tumours were ER/PR positive (50/60). Her2 was overexpressed in 13 tumours (21%). Over 70% (22/30) of patients had similar histology in both breasts and amongst them grade concordance was present in about 69% (15/22) of patients. Concordance rates of ER, PR and Her2 statuses were 83%, 80% and 90% respectively. Bilateral mastectomy was the commonest surgery performed in 80% of the patients followed by bilateral breast conservation in 13%. At the end of study period, 26 patients were alive and disease free. Median survival was 29 months (range 3-86 months). Conclusion In most patients with BBC, the second tumour is identified at an early stage than index

  7. Amphibole stability in primitive arc magmas: effects of temperature, H2O content, and oxygen fugacity

    NASA Astrophysics Data System (ADS)

    Krawczynski, Michael J.; Grove, Timothy L.; Behrens, Harald

    2012-08-01

    The water-saturated phase relations have been determined for a primitive magnesian andesite (57 wt% SiO2, 9 wt% MgO) from the Mt. Shasta, CA region over the pressure range 200-800 MPa, temperature range of 915-1,070 °C, and oxygen fugacities varying from the nickel-nickel oxide (NNO) buffer to three log units above NNO (NNO+3). The phase diagram of a primitive basaltic andesite (52 wt% SiO2, 10.5 wt% MgO) also from the Mt. Shasta region (Grove et al. in Contrib Miner Petrol 145:515-533; 2003) has been supplemented with additional experimental data at 500 MPa. Hydrous phase relations for these compositions allow a comparison of the dramatic effects of dissolved H2O on the crystallization sequence. Liquidus mineral phase stability and appearance temperatures vary sensitively in response to variation in pressure and H2O content, and this information is used to calibrate magmatic barometers-hygrometers for primitive arc magmas. H2O-saturated experiments on both compositions reveal the strong dependence of amphibole stability on the partial pressure of H2O. A narrow stability field is identified where olivine and amphibole are coexisting phases in the primitive andesite composition above 500 MPa and at least until 800 MPa, between 975-1,025 °C. With increasing H2O pressure ({P}_{{H}_2O}), the temperature difference between the liquidus and amphibole appearance decreases, causing a change in chemical composition of the first amphibole to crystallize. An empirical calibration is proposed for an amphibole first appearance barometer-hygrometer that uses Mg# of the amphibole and f_{{O}_2}: P_{{H}2O}(MPa)=[{Mg#/52.7}-0.014 * Updelta NNO]^{15.12} This barometer gives a minimum {P}_{{H}2O} recorded by the first appearance of amphibole in primitive arc basaltic andesite and andesite. We apply this barometer to amphibole antecrysts erupted in mixed andesite and dacite lavas from the Mt. Shasta, CA stratocone. Both high H2O pressures (500-900 MPa) and high pre-eruptive magmatic

  8. Spectra of discrete Schrödinger operators with primitive invertible substitution potentials

    NASA Astrophysics Data System (ADS)

    Mei, May

    2014-08-01

    We study the spectral properties of discrete Schrödinger operators with potentials given by primitive invertible substitution sequences (or by Sturmian sequences whose rotation angle has an eventually periodic continued fraction expansion, a strictly larger class than primitive invertible substitution sequences). It is known that operators from this family have spectra which are Cantor sets of zero Lebesgue measure. We show that the Hausdorff dimension of this set tends to 1 as coupling constant λ tends to 0. Moreover, we also show that at small coupling constant, all gaps allowed by the gap labeling theorem are open and furthermore open linearly with respect to λ. Additionally, we show that, in the small coupling regime, the density of states measure for an operator in this family is exact dimensional. The dimension of the density of states measure is strictly smaller than the Hausdorff dimension of the spectrum and tends to 1 as λ tends to 0.

  9. Nucleic acid-like structures II. Polynucleotide analogues as possible primitive precursors of nucleic acids

    NASA Astrophysics Data System (ADS)

    Schwartz, Alan W.; Visscher, J.; Bakker, C. G.; Niessen, J.

    1987-09-01

    Activated derivatives of purine-containing deoxynucleoside- diphosphates spontaneously oligomerize to produce pyrophosphate- linked oligodeoxynucleotide analogues. These analogues are of potential interest as models of primitive, polynucleotide precursors. The efficiency of oligomerization (ImpdGpIm and ImpdApIm much greater than ImpdIpIm) appears to reflect a combination of stacking forces and the specific geometric orientations of the stacked units. Under favorable conditions, chain lengths greater than 20 have been obtained for oligomers containing pdGp in the absence of a template. In the presence of a complementary template, the activated derivatives of pdGp and pdAp oligomerize much more extensively. An acyclo-analogue of G has also been shown to undergo template-directed oligomerization on poly(C). These observations suggest the possibility that primitive information transfer might have evolved in much simpler systems and that this function was taken over by polynucleotides at a later stage in evolution.

  10. Comets and the formation of biochemical compounds on the primitive earth - A review

    NASA Technical Reports Server (NTRS)

    Oro, J.; Mills, T.; Lazcano, A.

    1992-01-01

    Thirty years ago it was suggested that comets impacting on the primitive earth may have represented a significant source of terrestrial volatiles, including some important precursors for prebiotic synthesis (Oro, 1961). This possibility is strongly supported not only by models of the collisional history of the early earth, but also by astronomical evidence that suggests that frequent collisions of cometlike bodies from the circumstellar disk around the star Beta Pictoris are taking place. Although a significant fraction of the complex organic compounds that appear to be present in cometary nuclei were probably destroyed during impact, it is argued that cometary collisions with the primitive earth represented an important source of both free-energy and volatiles, and may have created transient, gaseous environments in which prebiotic synthesis may have taken place.

  11. The composition of the primitive atmosphere and the synthesis of organic compounds on the early Earth

    NASA Technical Reports Server (NTRS)

    Bada, J. L.; Miller, S. L.

    1985-01-01

    The generally accepted theory for the origin of life on the Earth requires that a large variety of organic compounds be present to form the first living organisms and to provide the energy sources for primitive life either directly or through various fermentation reactions. This can provide a strong constraint on discussions of the formation of the Earth and on the composition of the primitive atmosphere. In order for substantial amounts of organic compounds to have been present on the prebiological Earth, certain conditions must have existed. There is a large body of literature on the prebiotic synthesis of organic compounds in various postulated atmospheres. In this mixture of abiotically synthesized organic compounds, the amino acids are of special interest since they are utilized by modern organisms to synthesize structural materials and a large array of catalytic peptides.

  12. Dominance behaviour and regulation of foraging in the primitively eusocial wasp Ropalidia marginata (Lep.) (Hymenoptera: Vespidae).

    PubMed

    Bruyndonckx, Nadia; Kardile, Sujata P; Gadagkar, Raghavendra

    2006-03-01

    Ropalidia marginata is a primitively eusocial, polistine wasp widely distributed in peninsular India. In spite of its primitively eusocial status, queens of R. marginata are surprisingly docile and behaviourally non-dominant (except during the first week or so of their careers as queens). Yet they successfully maintain reproductive monopoly throughout their careers, probably through the use of pheromones. Workers exhibit dominance-subordinate interactions but these behaviours are not involved in regulating reproductive competition among the workers because workers with high dominance ranks are not necessarily the ones who replace lost queens. We have speculated and provided correlational evidence before that dominance-subordinate interactions among the workers have been co-opted in this species for the workers to regulate each other's foraging. Here, we provide experimental evidence in support of the speculation, by reducing demand for food and showing that this results in a significant decrease in the frequency of dominance-subordinate interactions among the workers. PMID:16406371

  13. The primitive wrist of Homo floresiensis and its implications for hominin evolution.

    PubMed

    Tocheri, Matthew W; Orr, Caley M; Larson, Susan G; Sutikna, Thomas; Jatmiko; Saptomo, E Wahyu; Due, Rokus Awe; Djubiantono, Tony; Morwood, Michael J; Jungers, William L

    2007-09-21

    Whether the Late Pleistocene hominin fossils from Flores, Indonesia, represent a new species, Homo floresiensis, or pathological modern humans has been debated. Analysis of three wrist bones from the holotype specimen (LB1) shows that it retains wrist morphology that is primitive for the African ape-human clade. In contrast, Neandertals and modern humans share derived wrist morphology that forms during embryogenesis, which diminishes the probability that pathology could result in the normal primitive state. This evidence indicates that LB1 is not a modern human with an undiagnosed pathology or growth defect; rather, it represents a species descended from a hominin ancestor that branched off before the origin of the clade that includes modern humans, Neandertals, and their last common ancestor. PMID:17885135

  14. Gonadotropic effects of dopamine in isolated workers of the primitively eusocial wasp, Polistes chinensis

    NASA Astrophysics Data System (ADS)

    Sasaki, Ken; Yamasaki, Kazuhisa; Tsuchida, Koji; Nagao, Takashi

    2009-05-01

    In social insects, biogenic amines are thought to play regulatory roles in the transition between reproductive states in females. To determine the effect of dopamine on the reproductive development of workers in primitively eusocial societies, isolated workers of the paper wasp Polistes chinensis were supplied with oral dopamine. Ovarian development was accelerated in dopamine-fed workers as compared to control workers of the same age fed only sucrose solution. Oral dopamine increased brain levels of dopamine and its metabolite ( N-acetyldopamine). Brain levels of tyramine or octopamine were also increased by dopamine application in one of two colonies; levels of the tyramine metabolite N-acetyltyramine were unchanged. These results indicate that dopamine plays a gonadotropic role in isolated workers in the primitively eusocial wasp, similar to the gonadotropic role previously reported for juvenile hormone. This is the first study to report effects of dopamine on ovarian development in workers of the paper wasp.

  15. Origin of lead from green glass of Apollo 15426: a search for primitive lunar lead.

    USGS Publications Warehouse

    Tatsumoto, M.; Premo, W.R.; Unruh, D.M.

    1987-01-01

    A major obstacle in lunar U-Pb chronology is the elusiveness of the primary Pb isotopic composition and U/Pb ratio and therefore the Pb evolution for the early history of the moon. In an attempt to seek the primitive lunar Pb isotopoc composition, green glass from lunar clod 15426,49 was studied for U-Th-Pb systematics because it is extremely Mg-rich and known to be the most primitive among sampled lunar volcanic rocks. Because of the low Pb concentration and high U/Pb ratio observed for the interior, the initial Pb was poorly defined. Nevertheless, the data indicate that lunar Pb evolved in an environment with 238U/204Pb = 19-55, which is considerably lower than those for mare basalts (around 300) but higher than values for the Earth (6-8).-from Authors

  16. A model for the enantiomeric enrichment of polypeptides on the primitive earth

    NASA Technical Reports Server (NTRS)

    Blair, N. E.; Bonner, W. A.

    1981-01-01

    A potential model is presented for the origin of optical activity in polypeptides on the primitive earth due to enantiomeric enrichment in succeeding polymerization-hydrolysis cycles. The model was developed in experiments with the polymerization of a DL-leucine N-carboxyanhydride mixture with a 31.2% enantiomeric excess of the L isomer with sodium methoxide initiator to yield a polyleucine product which was in turn partially hydrolyzed by acid. The polymerization-hydrolysis was found to produce a net 23.8% increase in the enantiomeric excess of the remaining unhydrolyzed polypeptide (14.2% from the polymerization and 9.6% from the partial hydrolysis). On the basis of these results, it is suggested that a slight excess produced by an appropriate chiral physical process may be enhanced by cycles of stereoselective polymerization and hydrolysis driven by fluctuating wet and dry environmental cycles on the primitive earth.

  17. Extra-embryonic Wnt3 regulates the establishment of the primitive streak in mice

    PubMed Central

    Yoon, Yeonsoo; Huang, Tingting; Tortelote, Giovane G.; Wakamiya, Maki; Hadjantonakis, Anna-Katerina; Behringer, Richard R.; Rivera-Pérez, Jaime A.

    2015-01-01

    The establishment of the head to tail axis at early stages of development is a fundamental aspect of vertebrate embryogenesis. In mice, experimental embryology, genetics and expression studies have suggested that the visceral endoderm, an extra-embryonic tissue, plays an important role in anteroposterior axial development. Here we show that absence of Wnt3 in the posterior visceral endoderm leads to delayed formation of the primitive streak and that interplay between anterior and posterior visceral endoderm restricts the position of the primitive streak. Embryos lacking Wnt3 in the visceral endoderm, however, appear normal by E9.5. Our results suggest a model for axial development in which multiple signals are required for anteroposterior axial development in mammals. PMID:25907228

  18. Primitive and contaminated basalts from the Southern Rocky Mountains, U.S.A

    USGS Publications Warehouse

    Doe, B.R.; Lipman, P.W.; Hedge, C.E.; Kurasawa, H.

    1969-01-01

    Basalts in the Southern Rocky Mountains province have been analyzed to determine if any of them are primitive. Alkali plagioclase xenocrysts armored with calcic plagioclase seem to be the best petrographic indicator of contamination. The next best indicator of contamination is quartz xenocrysts armored with clinopyroxene. On the rocks and the region studied, K2O apparently is the only major element with promise of separating primitive basalt from contaminated basalt inasmuch as it constitutes more than 1 % in all the obviously contaminated basalts. K2O: lead (> 4 ppm) and thorium (> 2 ppm) contents and Rb/Sr (> 0.035) are the most indicative of the trace elements studied. Using these criteria, three basalt samples are primitive (although one contains 1.7% K2O) and are similar in traceelement contents to Hawaiian and Eastern Honshu, Japan, primitive basalts. Contamination causes lead isotope ratios, 206Pb/204Pb and 208Pb/204Pb, to become less radiogenic, but it has little or no effect on 87Sr/86Sr. We interpret the effect on lead isotopes to be due to assimilation either of lower crustal granitic rocks, which contain 5-10 times as much lead as basalt and which have been low in U/Pb and Th/Pb since Precambrian times, or of upper crustal Precambrian or Paleozoic rocks, which have lost much of their radiogenic lead because of heating prior to assimilation. The lack of definite effects on strontium isotopes may be due to the lesser strontium contents of granitic crustal rocks relative to basaltic rocks coupled with lack of a large radiogenic enrichment in the crustal rocks. Lead isotope ratios were found to be less radiogenic in plagioclase separates from an obviously contaminated basalt than in the primitive basalts. The feldspar separate that is rich in sodic plagioclase xenocrysts was found to be similar to the whole-rock composition for 206Pb/204Pb and 208Pb/204Pb whereas a more dense fraction probably enriched in more calcic plagioclase phenocrysts is more similar

  19. Nucleic acid-like structures. II - Polynucleotide analogues as possible primitive precursors of nucleic acids

    NASA Technical Reports Server (NTRS)

    Schwartz, Alan W.; Visscher, J.; Bakker, C. G.; Niessen, J.

    1987-01-01

    Activated derivatives of purine-containing deoxynucleoside- diphosphates spontaneously oligomerize to produce pyrophosphate- linked oligodeoxynucleotide analogs. These analogs are of potential interest as models of primitive, polynucleotide precursors. The efficiency of oligomerization (ImpdGpIm and ImpdApIm much greater than ImpdIpIm) appears to reflect a combination of stacking forces and the specific geometric orientations of the stacked units. Under favorable conditions, chain lengths greater than 20 have been obtained for oligomers containing pdGp in the absence of a template. In the presence of a complementary template, the activated derivatives of pdGp and pdAp oligomerize much more extensively. An acyclo-analog of G has also been shown to undergo template-directed oligomerization on poly(C). These observations suggest the possibility that primitive information transfer might have evolved in much simpler systems and that this function was taken over by polynucleotides at a later stage in evolution.

  20. Peripheral facial palsy, the only presentation of a primitive neuroectodermal tumor of the skull base

    PubMed Central

    Kim, Hyung Jin; Kang, Ben; Joo, Eun Young; Kim, Eun Young; Kwon, Young Se

    2015-01-01

    Introduction Peripheral facial palsy is rarely caused by primary neoplasms, which are mostly constituted of tumors of the central nervous system, head and neck, and leukemia. Presentation of case A 2-month-old male infant presented with asymmetric facial expression for 3 weeks. Physical examination revealed suspicious findings of right peripheral facial palsy. Computed tomography of the temporal bone revealed a suspicious bone tumor centered in the right petrous bone involving surrounding bones with extension into the middle ear cavity and inner ear. Subtotal resection of the tumor was performed due to crucial structures adjacent the mass. Histopathology and immunohistochemistry of the resected tumor was consistent with primitive neuroectodermal tumor. Conclusion We report a rare case of a primitive neuroectodermal tumor located at the skull base presenting with only peripheral facial palsy. PMID:26710328

  1. Primal negation as a primitive agony: reflections on the absence of a place-for-becoming.

    PubMed

    Dowd, Amanda

    2012-02-01

    The fundamental existential question for the borderline/ hysteric patient is not 'who am I?' but 'where am I?' or perhaps 'where can I be?'. This paper(1) explores this statement with reference to a pivotal clinical experience which changed the author's thinking and theorizing about this state. Case material is presented which focuses on an experience of what the author describes as 'primal negation' which gives rise to primitive displacement anxiety and this is proposed as a specific form of primitive mental agony. There is an elaboration of a borderline defence against an unthinkable experience of formless dread which the author conceives as an attempt to construct a sense of a liveable shape. There is a description of an aspect of the analyst's 'dreaming on behalf of the patient' and an elaboration of what this came to mean for both analyst and patient. PMID:22288538

  2. Formation and Processing of Amorphous Silicates in Primitive Carbonaceous Chondrites and Cometary Dust

    NASA Technical Reports Server (NTRS)

    Keller, Lindsay P.; Messenger, S.

    2012-01-01

    Chondritic-porous interplanetary dust particles (CP IDPs) exhibit strongly heterogeneous and unequilibrated mineralogy at sub-micron scales, are enriched in carbon, nitrogen and volatile trace elements, and contain abundant presolar materials [1-4]. These observations suggest that CP IDPs have largely escaped the thermal processing and water-rock interactions that have severely modified or destroyed the original mineralogy of primitive meteorites. CP IDPs are believed to represent direct samples of the building blocks of the Solar System - a complex mixture of nebular and presolar materials largely unperturbed by secondary processing. The chemical and isotopic properties of CP IDPs and their atmospheric entry velocities are also consistent with cometary origins. GEMS (glass with embedded metal and sulfides) grains are a major silicate component of CP IDPs. GEMS grains are < 0.5 microns in diameter objects that consist of numerous 10 to 50 nm-sized Fe-Ni metal and Fe-Ni sulfide grains dispersed in a Mg-Si-Al-Fe amorphous silicate matrix [2, 5]. Based on their chemistry and isotopic compositions, most GEMS appear to be non-equilibrium condensates from the early solar nebula [2]. If GEMS grains are a common nebular product, then they should also be abundant in the matrices of the most physically primitive chondritic meteorites. Although amorphous silicates are common in the most primitive meteorites [6-9], their relationship to GEMS grains and the extent to which their compositions and microstructure have been affected by parent body processing (oxidation and aqueous alteration) is poorly constrained. Here we compare and contrast the chemical, microstructural and isotopic properties of amorphous silicates in primitive carbonaceous chondrites to GEMS grains in IDPs.

  3. 5 - 14 μm Spitzer spectra of primitive asteroid families

    NASA Astrophysics Data System (ADS)

    Landsman, Zoe A.; Licandro, Javier; Campins, Humberto; Ziffer, Julie; de Prá, Mário

    2015-11-01

    Compositional studies of primitive asteroid families provide constraints on the physical and chemical environment of the solar nebula and the evolution of the asteroid belt. Spectroscopic studies in the visible and near-infrared have shown spectral diversity between primitive families. Our goal is to better constrain the composition of two primitive families with very different ages: Themis (~2.5 Gyr) and Veritas (~8 Myr). We analyzed 5 - 14 μm Spitzer Space Telescope spectra of a total of 18 asteroids, nine from each family. We report the presence of a broad 10-μm emission feature, attributed to a layer of fine-grained silicates, in the spectra of all nine Themis asteroids and six of nine Veritas asteroids in our sample. Spectral contrast in statistically significant detections of the 10-μm feature ranges from 1% ± 0.1% to 8.5% ± 0.9%. Comparison with the spectra of primitive meteorites (McAdam et al. 2015, Icarus, 245, 320) suggests asteroids in both families are similar to meteorites with lower abundances of phyllosilicates. We used the Near-Earth Asteroid Thermal Model to derive diameters, beaming parameters and albedos for our sample. Asteroids in both families have beaming parameters near unity and geometric albedos in the range 0.06 ± 0.01 to 0.14 ± 0.02. We find that contrast of the silicate emission feature is not correlated with asteroid diameter; however, higher 10-μm contrast may be associated with flatter spectral slopes in the near-infrared. The spectra of both families suggest icy bodies with some amount of fine-grained silicates, but with coarser grains or denser surface structure than Trojan asteroids and comets.

  4. Supersymmetry algebra cohomology. IV. Primitive elements in all dimensions from D = 4 to D = 11

    NASA Astrophysics Data System (ADS)

    Brandt, Friedemann

    2013-05-01

    The primitive elements of the supersymmetry algebra cohomology as defined in previous work are derived for standard supersymmetry algebras in dimensions D = 5, …, 11 for all signatures of the related Clifford algebras of gamma matrices and all numbers of supersymmetries. The results are presented in a uniform notation along with results of previous work for D = 4, and derived by means of dimensional extension from D = 4 up to D = 11.

  5. Abundances of presolar silicon carbide grains in primitive meteorites determined by NanoSIMS

    NASA Astrophysics Data System (ADS)

    Davidson, Jemma; Busemann, Henner; Nittler, Larry R.; Alexander, Conel M. O.'D.; Orthous-Daunay, François-Régis; Franchi, Ian A.; Hoppe, Peter

    2014-08-01

    It has been suggested that the matrices of all chondrites are dominated by a common material with Ivuna-like (CI) abundances of volatiles, presolar grains and insoluble organic matter (IOM) (e.g., Alexander, 2005). However, matrix-normalized abundances of presolar silicon carbide (SiC) grains estimated from their noble gas components show significant variations in even the most primitive chondrites (Huss and Lewis, 1995; Huss et al., 2003), in contradiction to there being a common chondrite matrix material. Here we report presolar SiC abundances determined by NanoSIMS raster ion imaging of IOM extracted from primitive members of different meteorite groups. We show that presolar SiC abundance determinations are comparable between NanoSIMS instruments located at three different institutes, between residues prepared by different demineralization techniques, and between microtomed and non-microtomed samples. Our derived SiC abundances in CR chondrites are comparable to those found in the CI chondrites (∼30 ppm) and are much higher than previously determined by noble gas analyses. The revised higher CR SiC abundances are consistent with the CRs being amongst the most primitive chondrites in terms of the isotopic compositions and disordered nature of their organic matter. Similar abundances between CR1, CR2, and CR3 chondrites indicate aqueous alteration on the CR chondrite parent body has not progressively destroyed SiC grains in them. A low SiC abundance for the reduced CV3 RBT 04133 can be explained by parent body thermal metamorphism at an estimated temperature of ∼440 °C. Minor differences between primitive members of other meteorite classes, which did not experience such high temperatures, may be explained by prolonged oxidation at lower temperatures under which SiC grains formed outer layers of SiO2 that were not thermodynamically stable, leading to progressive degassing/destruction of SiC.

  6. Rare Presentation of Supratentorial Primitive Neuroectodermal Tumors Mimicking Bifocal Germ Cell Tumors: 2 Case Reports.

    PubMed

    Phuakpet, Kamon; Larouche, Valerie; Hawkins, Cynthia; Huang, Annie; Tabori, Uri; Bartels, Ute K; Bouffet, Eric

    2016-03-01

    Bifocal pineal and suprasellar tumors have only been described in the context of germ cell tumors in the pediatric age group. We report 2 patients with radiologic findings of bifocal pineal and suprasellar lesions, with a histologic diagnosis of supratentorial primitive neuroectodermal tumor. The absence of diabetes insipidus and other endocrine abnormalities was noteworthy in both cases. This observation challenges previous reports on the pathognomonic value of this clinico-radiologic entity. PMID:26241725

  7. The Early Evolution of the Solar Nebula with Implications for the Formation of Primitive Material

    NASA Technical Reports Server (NTRS)

    Bell, K. Robbins

    2002-01-01

    I will present a review of our understanding of the early evolution of the solar nebula especially as it bears on the formation of primitive meteorites. Although my emphasis will be on the results of theoretical studies, I will also summarize some of the observational evidence supporting these conclusions. In particular, I will summarize our current best deductions about midplane temperatures and densities of the solar nebula and about both long-term and episodic evolution.

  8. An empirically-derived taxonomy of interaction primitives for interactive cartography and geovisualization.

    PubMed

    Roth, Robert E

    2013-12-01

    Proposals to establish a 'science of interaction' have been forwarded from Information Visualization and Visual Analytics, as well as Cartography, Geovisualization, and GIScience. This paper reports on two studies to contribute to this call for an interaction science, with the goal of developing a functional taxonomy of interaction primitives for map-based visualization. A semi-structured interview study first was conducted with 21 expert interactive map users to understand the way in which map-based visualizations currently are employed. The interviews were transcribed and coded to identify statements representative of either the task the user wished to accomplish (i.e., objective primitives) or the interactive functionality included in the visualization to achieve this task (i.e., operator primitives). A card sorting study then was conducted with 15 expert interactive map designers to organize these example statements into logical structures based on their experience translating client requests into interaction designs. Example statements were supplemented with primitive definitions in the literature and were separated into two sorting exercises: objectives and operators. The objective sort suggested five objectives that increase in cognitive sophistication (identify, compare, rank, associate, & delineate), but exhibited a large amount of variation across participants due to consideration of broader user goals (procure, predict, & prescribe) and interaction operands (space-alone, attributes-in-space, & space-in-time; elementary & general). The operator sort suggested five enabling operators (import, export, save, edit, & annotate) and twelve work operators (reexpress, arrange, sequence, resymbolize, overlay, pan, zoom, reproject, search, filter, retrieve, & calculate). This taxonomy offers an empirically-derived and ecologically-valid structure to inform future research and design on interaction. PMID:24051802

  9. Primitive Neuroectodermal Tumor of the Pancreas: A Case Report and Review of the Literature

    PubMed Central

    Teixeira, Uirá; Goldoni, Marcos; Unterleider, Michelle; Diedrich, João; Balbinot, Diogo; Rodrigues, Pablo; Monteiro, Rodolfo; Gomes, Daniel; Sampaio, José; Fontes, Paulo; Waechter, Fábio

    2015-01-01

    Primitive neuroectodermal tumors (PNETs) are presented as rare malignant neoplasms. In unusual cases, those neoplasms may arise in solid organs containing neuroendocrine cells, such as the pancreas. Herein the case of a 28-year-old patient that underwent gastroduodenopancreatectomy after the diagnosis of a huge mass (PNET) located in both head and body of the pancreas is reported. This is the 19th case of pancreatic PNET reported in literature. PMID:26101685

  10. Supersymmetry algebra cohomology. IV. Primitive elements in all dimensions from D= 4 to D= 11

    SciTech Connect

    Brandt, Friedemann

    2013-05-15

    The primitive elements of the supersymmetry algebra cohomology as defined in previous work are derived for standard supersymmetry algebras in dimensions D= 5, Horizontal-Ellipsis , 11 for all signatures of the related Clifford algebras of gamma matrices and all numbers of supersymmetries. The results are presented in a uniform notation along with results of previous work for D= 4, and derived by means of dimensional extension from D= 4 up to D= 11.

  11. Looking for the most ``primitive'' organism(s) on Earth today: the state of the art

    NASA Astrophysics Data System (ADS)

    Forterre, Patrick

    1995-02-01

    Molecular phylogenetic studies have revealed a tripartite division of the living world into two procaryotic groups, Bacteria and Archaea, and one eucaryotic group, Eucarya. Which group is the most "primitive"? Which groups are sister? The answer to these questions would help to delineate the characters of the last common ancestor to all living beings, as a first step to reconstruct the earliest periods of biological evolution on Earth. The current "Procaryotic dogma" claims that procaryotes are primitive. Since the ancestor of Archaea was most probably a hyperthermophile, and since bacteria too might have originated from hyperthermophiles, the procaryotic dogma has been recently connected to the hot origin of life hypothesis. However, the notion that present-day hyperthermophiles are primitive has been challenged by recent findings, in these unique microorganisms, of very elaborate adaptative devices for life at high temperature. Accordingly, I discuss here alternative hypotheses that challenge the procaryotic dogma, such as the idea of a universal ancestor with molecular features in between those of eucaryotes and procaryotes, or the origin of procaryotes via thermophilic adaptation. Clearly, major evolutionary questions about early cellular evolution on Earth remain to be settled before we can speculate with confidence about which kinds of life might have appeared on other planets.

  12. Anatomy and relationships of Pachyrhachis problematicus, a primitive snake with hindlimbs

    PubMed Central

    Lee, M. S. Y.

    1998-01-01

    The anatomy of Pachyrhachis problematicus, an elongate, limb-reduced squamate from the Upper Cretaceous of Israel, is described and evaluated in detail. Previously considered a snake-like 'lizard' of uncertain affinities, it is here shown to be the most primitive snake, and the sister-group to all other snakes. Pachyrhachis exhibits numerous derived characters uniting it with modern snakes (scolecophidians and alethinophidians): e.g. mobile premaxilla-maxilla articulation, braincase enclosed by frontals and parietals, sagittal parietal crest, absence of tympanic recess, single postdentary bone, over 140 presacral vertebrae, and complete loss of shoulder girdle and forelimb. However, it is more primitive than all modern snakes in retaining some strikingly primitive (lizard-like) features: presence of a jugal, squamosal, normal sacral attachment, and well-developed hindlimb composed of femur, tibia, fibula, and tarsals. Pachyrhachis provides additional support for the hypothesis that snakes are most closely related to Cretaceous marine lizards (mosasauroids). Almost all of the derived characters proposed to unite snakes and mosasauroids are highly developed in Pachyrhachis: the mobile mandibular symphysis, intramandibular joint, long and recurved pterygoid teeth, quadrate suspended by the supratemporal, loosely united pelvic elements (ilium, ischium, and pubis), and separate astragalus and calcaneum.

  13. Search for the Most `primitive' Membranes and Their Reinforcers: A Review of the Polyprenyl Phosphates Theory

    NASA Astrophysics Data System (ADS)

    Nakatani, Yoichi; Ribeiro, Nigel; Streiff, Stéphane; Gotoh, Mari; Pozzi, Gianluca; Désaubry, Laurent; Milon, Alain

    2014-09-01

    Terpenoids have an essential function in present-day cellular membranes, either as membrane reinforcers in Eucarya and Bacteria or as principal membrane constituents in Archaea. We have shown that some terpenoids, such as cholesterol and α, ω-dipolar carotenoids reinforce lipid membranes by measuring the water permeability of unilamellar vesicles. It was possible to arrange the known membrane terpenoids in a `phylogenetic' sequence, and a retrograde analysis led us to conceive that single-chain polyprenyl phosphates might have been `primitive' membrane constituents. By using an optical microscopy, we have observed that polyprenyl phosphates containing 15 to 30 C-atoms form giant vesicles in water in a wide pH range. The addition of 10 % molar of some polyprenols to polyprenyl phosphate vesicles have been shown to reduce the water permeability of membranes even more efficiently than the equimolecular addition of cholesterol. A `prebiotic' synthesis of C10 and C15 prenols from C5 monoprenols was achieved in the presence of a montmorillonite clay. Hypothetical pathway from C1 or C2 units to `primitive' membranes and that from `primitive' membranes to archaeal lipids are presented.

  14. The logical primitives of thought: Empirical foundations for compositional cognitive models.

    PubMed

    Piantadosi, Steven T; Tenenbaum, Joshua B; Goodman, Noah D

    2016-07-01

    The notion of a compositional language of thought (LOT) has been central in computational accounts of cognition from earliest attempts (Boole, 1854; Fodor, 1975) to the present day (Feldman, 2000; Penn, Holyoak, & Povinelli, 2008; Fodor, 2008; Kemp, 2012; Goodman, Tenenbaum, & Gerstenberg, 2015). Recent modeling work shows how statistical inferences over compositionally structured hypothesis spaces might explain learning and development across a variety of domains. However, the primitive components of such representations are typically assumed a priori by modelers and theoreticians rather than determined empirically. We show how different sets of LOT primitives, embedded in a psychologically realistic approximate Bayesian inference framework, systematically predict distinct learning curves in rule-based concept learning experiments. We use this feature of LOT models to design a set of large-scale concept learning experiments that can determine the most likely primitives for psychological concepts involving Boolean connectives and quantification. Subjects' inferences are most consistent with a rich (nonminimal) set of Boolean operations, including first-order, but not second-order, quantification. Our results more generally show how specific LOT theories can be distinguished empirically. (PsycINFO Database Record PMID:27077241

  15. Kinematic primitives for walking and trotting gaits of a quadruped robot with compliant legs

    PubMed Central

    Spröwitz, Alexander T.; Ajallooeian, Mostafa; Tuleu, Alexandre; Ijspeert, Auke Jan

    2014-01-01

    In this work we research the role of body dynamics in the complexity of kinematic patterns in a quadruped robot with compliant legs. Two gait patterns, lateral sequence walk and trot, along with leg length control patterns of different complexity were implemented in a modular, feed-forward locomotion controller. The controller was tested on a small, quadruped robot with compliant, segmented leg design, and led to self-stable and self-stabilizing robot locomotion. In-air stepping and on-ground locomotion leg kinematics were recorded, and the number and shapes of motion primitives accounting for 95% of the variance of kinematic leg data were extracted. This revealed that kinematic patterns resulting from feed-forward control had a lower complexity (in-air stepping, 2–3 primitives) than kinematic patterns from on-ground locomotion (νm4 primitives), although both experiments applied identical motor patterns. The complexity of on-ground kinematic patterns had increased, through ground contact and mechanical entrainment. The complexity of observed kinematic on-ground data matches those reported from level-ground locomotion data of legged animals. Results indicate that a very low complexity of modular, rhythmic, feed-forward motor control is sufficient for level-ground locomotion in combination with passive compliant legged hardware. PMID:24639645

  16. Kinematic primitives for walking and trotting gaits of a quadruped robot with compliant legs.

    PubMed

    Spröwitz, Alexander T; Ajallooeian, Mostafa; Tuleu, Alexandre; Ijspeert, Auke Jan

    2014-01-01

    In this work we research the role of body dynamics in the complexity of kinematic patterns in a quadruped robot with compliant legs. Two gait patterns, lateral sequence walk and trot, along with leg length control patterns of different complexity were implemented in a modular, feed-forward locomotion controller. The controller was tested on a small, quadruped robot with compliant, segmented leg design, and led to self-stable and self-stabilizing robot locomotion. In-air stepping and on-ground locomotion leg kinematics were recorded, and the number and shapes of motion primitives accounting for 95% of the variance of kinematic leg data were extracted. This revealed that kinematic patterns resulting from feed-forward control had a lower complexity (in-air stepping, 2-3 primitives) than kinematic patterns from on-ground locomotion (νm4 primitives), although both experiments applied identical motor patterns. The complexity of on-ground kinematic patterns had increased, through ground contact and mechanical entrainment. The complexity of observed kinematic on-ground data matches those reported from level-ground locomotion data of legged animals. Results indicate that a very low complexity of modular, rhythmic, feed-forward motor control is sufficient for level-ground locomotion in combination with passive compliant legged hardware. PMID:24639645

  17. Experimental Phase Relations of Hydrous, Primitive Melts: Implications for variably depleted mantle melting in arcs and the generation of primitive high-SiO2 melts

    NASA Astrophysics Data System (ADS)

    Weaver, S.; Wallace, P. J.; Johnston, A.

    2010-12-01

    There has been considerable experimental and theoretical work on how the introduction of H2O-rich fluids into the mantle wedge affects partial melting in arcs and chemical evolution of mantle melts as they migrate through the mantle. Studies aimed at describing these processes have become largely quantitative, with an emphasis on creating models that suitably predict the production and evolution of melts and describe the thermal state of arcs worldwide. A complete experimental data set that explores the P-T conditions of melt generation and subsequent melt extraction is crucial to the development, calibration, and testing of these models. This work adds to that data set by constraining the P-T-H2O conditions of primary melt extraction from two end-member subduction zones, a continental arc (Mexico) and an intraoceanic arc (Aleutians). We present our data in context with primitive melts found worldwide and with other experimental studies of melts produced from fertile and variably depleted mantle sources. Additionally, we compare our experimental results to melt compositions predicted by empirical and thermodynamic models. We used a piston-cylinder apparatus and employed an inverse approach in our experiments, constraining the permissible mantle residues with which our melts could be in equilibrium. We confirmed our inverse approach with forced saturation experiments at the P-T-H2O conditions of melt-mantle equilibration. Our experimental results show that a primitive, basaltic andesite melt (JR-28) from monogenetic cinder cone Volcan Jorullo (Central Mexico) last equilibrated with a harzburgite mantle residue at 1.2-1.4 GPa and 1150-1175°C with H2O contents in the range of 5.5-7 wt% H2O prior to ascent and eruption. Phase relations of a tholeiitic high-MgO basaltic melt (ID-16) from the Central Aleutians (Okmok) show the conditions of last equilibration with a fertile lherzolite mantle residue at shallower (1.2 GPa) but hotter (1275°C) conditions with

  18. Emergency caudate lobectomy for ruptured hepatocellular carcinoma with multiple primary cancers

    PubMed Central

    Sun, Long-Hao; Han, Hong-Qiu; Wang, Peng-Zhi; Tian, Wei-Jun

    2013-01-01

    We report a case of metachronous multiple primary malignancies involving both rectum and liver with colonic metastasis from hepatocellular carcinoma (HCC) through hematogenous pathway. A 72-year-old woman was admitted to the emergency department with right upper abdominal pain for 4 h. Considering her surgical history of Mile’s procedure plus liver resection for rectal cancer with liver metastasis three years ago and the finding of urgent computed tomography scan on admission, the preoperative diagnosis was spontaneous rupture of rectal liver metastasis located in caudate lobe and colonic metastasis from rectal cancer. The patient underwent an emergency isolated caudate lobectomy at a hemorrhagic shock status. Pathology reported a primary HCC in the caudate lobe and colonic metastasis of HCC with tumor embolus in the surrounding vessels of the intestine. No regional lymph node involvement was found. It is hypothesized that HCC may disseminate hematogenously to the ascending colon, thus making it a rare case. PMID:23372368

  19. Insertion of 3-D-primitives in mesh-based representations: towards compact models preserving the details.

    PubMed

    Lafarge, Florent; Keriven, Renaud; Brédif, Mathieu

    2010-07-01

    We propose an original hybrid modeling process of urban scenes that represents 3-D models as a combination of mesh-based surfaces and geometric 3-D-primitives. Meshes describe details such as ornaments and statues, whereas 3-D-primitives code for regular shapes such as walls and columns. Starting from an 3-D-surface obtained by multiview stereo techniques, these primitives are inserted into the surface after being detected. This strategy allows the introduction of semantic knowledge, the simplification of the modeling, and even correction of errors generated by the acquisition process. We design a hierarchical approach exploring different scales of an observed scene. Each level consists first in segmenting the surface using a multilabel energy model optimized by -expansion and then in fitting 3-D-primitives such as planes, cylinders or tori on the obtained partition where relevant. Experiments on real meshes, depth maps and synthetic surfaces show good potential for the proposed approach. PMID:20236893

  20. Primitive, high-Mg basaltic andesites: direct melts of the shallow, hot, wet mantle

    NASA Astrophysics Data System (ADS)

    Andrews, A.; Grove, T. L.

    2013-12-01

    Direct mantle melts are rare in subduction zone settings. Such melts are identified by Mg #s (Mg # = Mg / (Mg+Fe)) greater than ~0.73, indicating chemical equilibrium with Fo90 mantle olivine. Most of these primitive arc melts are basaltic, characterized by SiO2 contents of ~48-50 wt % and MgO contents ranging from 8-10 wt %. However, primitive basaltic andesites with mantle-equilibrated Mg #s have also been found at subduction zones worldwide. These basaltic andesites have higher SiO2 contents (53-58 wt %) than typical primitive basalts as well as high MgO (8-10 wt %). Because these rocks have high SiO2 contents and yet retain evidence for chemical equilibrium with the mantle (Mg #s), their petrogenesis has sparked intense debate as researchers have tried to discern how these samples fit into the paradigm of mantle melting at subduction zones. Through an understanding of the conditions and processes that produce the SiO2 enrichment in these rocks, we also aim to understand the role of these melts in producing the observed andesitic compositional characteristics of the continental crust. To understand the petrogenesis of primitive, high-Mg basaltic andesites, this study investigates the experimental melts of undepleted mantle peridotite plus a slab component (Na-2O + K2O) from 1,205-1,470°C at 1.0-2.0 GPa under water-undersaturated conditions (0-5 wt % H2O). At 1.0 and 1.2 GPa, the experimental melts reproduce the compositions of natural primitive, high-Mg basaltic andesites in all major elements (SiO2, TiO2, Al2O3, FeO, MnO, MgO, and Na2O+K2O) except CaO. CaO contents are higher than the range of the natural samples by ~2 wt % at the highest silica contents of the experiments (54-56 wt% SiO2). This suggests that at 1.0-1.2 GPa, a higher percent of melting (30-35 %) with 3-5 wt % H2O is required to drive the chemical compositions of the experiments toward the representative compositions of the natural rocks. The experimental melts also show that mantle-wall rock

  1. [Breast cancer: patient care, rehabilitation, psychooncology].

    PubMed

    Kahán, Zsuzsanna; Szántó, István; Molnár, Mária; Rohánszky, Magda; Koncz, Zsuzsa; Mailáth, Mónika; Kapitány, Zsuzsanna; Dudás, Rita

    2016-09-01

    The development of a recommendation was intended for the follow-up of breast cancer patients treated with curative intent in Hungary. Follow-up includes the permanent contact with and health education of the patient, the surveillance and control of the adverse effects of oncological therapies or radiotherapy, the screening of metachron cancers, and the comprehensive (physical, psychological and social) rehabilitation of the patient. The early detection of local/regional tumor relapse is essential with careful follow-up, but there is no need for screening of distant metastases by means of imaging studies or tumor marker tests. If adjuvant endocrine therapy is needed, optimal adherence should be ensured with supportive therapy. In rare cases, special issues such as breast cancer risk/genetic mutation, pregnancy are raised, which should be thoughtfully discussed in view of recent advances in oncology. Follow-up is generally practised by the oncologist, however, in some cases the social worker, the physiotherapist, the psychooncologist, or in special cases, the lymphoedema expert is to be involved. The follow-up approach should be comprehensive and holistic. PMID:27579724

  2. LIF-dependent primitive neural stem cells derived from mouse ES cells represent a reversible stage of neural commitment.

    PubMed

    Tsang, Wan-Hong; Wang, Bin; Wong, Wing Ki; Shi, Shuo; Chen, Xiao; He, Xiangjun; Gu, Shen; Hu, Jiabiao; Wang, Chengdong; Liu, Pi-Chu; Lu, Gang; Chen, Xiongfong; Zhao, Hui; Poon, Wai-Sang; Chan, Wai-Yee; Feng, Bo

    2013-11-01

    Primitive neural stem cells (NSCs) define an early stage of neural induction, thus provide a model to understand the mechanism that controls initial neural commitment. In this study, we investigated primitive NSCs derived from mouse embryonic stem cells (ESCs). By genome-wide transcriptional profiling, we revealed their unique signature and depicted the molecular changes underlying critical cell fate transitions during early neural induction at a global level. Together with qRT-PCR analysis, our data illustrated that primitive NSCs retained expression of key pluripotency genes Oct4 and Nanog, while exhibiting repression of other pluripotency-related genes Zscan4, Foxp1 and Dusp9 and up-regulation of neural markers Sox1 and Hes1. The early differentiation feature in primitive NSCs was also supported by their intermediate characters on cell cycle profiles. Moreover, re-plating primitive NSCs back to ESC culture condition could reverse them back to ESC stage, as shown by reversible regulation of marker genes, cell cycle profile changes and enhanced embryoid body formation. In addition, our microarray analysis also identified genes differentially expressed in primitive NSCs, and loss-of-function analysis demonstrated that Hes1 and Ccdc141 play important function at this stage, opening up an opportunity to further understand the regulation of early neural commitment. PMID:23973799

  3. Cancer Basics

    MedlinePlus

    ... Cancer? Breast Cancer Colon/Rectum Cancer Lung Cancer Prostate Cancer Skin Cancer Show All Cancer Types News and Features Cancer Glossary ACS Bookstore Cancer Information Cancer Basics Cancer Prevention & Detection Signs & Symptoms of Cancer Treatments & Side Effects ...

  4. Risk of Esophageal Cancer Following Percutaneous Endoscopic Gastrostomy in Head and Neck Cancer Patients: A Nationwide Population-Based Cohort Study in Taiwan.

    PubMed

    Lin, Kuen-Tze; Lin, Chun-Shu; Lee, Shih-Yu; Huang, Wen-Yen; Chang, Wei-Kuo

    2016-03-01

    Esophageal cancers account for majority of synchronous or metachronous head and neck cancers. This study examined the risk of esophageal cancer following percutaneous endoscopic gastrostomy (PEG) in head and neck cancer patients using the Taiwan National Health Insurance Research Database. From 1997 to 2010, we identified and analyzed 1851 PEG patients and 3702 sex-, age-, and index date-matched controls. After adjusting for esophagitis, esophagus stricture, esophageal reflux, and primary sites, the PEG cohort had a higher adjusted hazard ratio (2.31, 95% confidence interval [CI] = 1.09-4.09) of developing esophageal cancer than the controls. Primary tumors in the oropharynx, hypopharynx, and larynx were associated with higher incidence of esophageal cancer. The adjusted hazard ratios were 1.49 (95% CI = 1.01-1.88), 3.99 (95% CI = 2.76-4.98), and 1.98 (95% CI = 1.11-2.76), respectively. Head and neck cancer patients treated with PEG were associated with a higher risk of developing esophageal cancer, which could be fixed by surgically placed tubes. PMID:26945412

  5. p18Ink4c and p53 Act as tumor suppressors in cyclin D1-driven primitive neuroectodermal tumor.

    PubMed

    Saab, Raya; Rodriguez-Galindo, Carlos; Matmati, Kelly; Rehg, Jerold E; Baumer, Shannon H; Khoury, Joseph D; Billups, Catherine; Neale, Geoffrey; Helton, Kathleen J; Skapek, Stephen X

    2009-01-15

    The retinoblastoma (RB) tumor suppressor pathway is likely important in primitive neuroectodermal tumors (PNET) of the brain. In fact, 10% to 15% of children born with RB mutations develop brain PNETs, commonly in the pineal gland. Cyclin D1, which in association with cyclin-dependent kinase (Cdk) 4 and Cdk6 phosphorylates and inactivates the RB protein, is expressed in 40% of sporadic medulloblastoma, a PNET of the cerebellum. To understand tumorigenic events cooperating with RB pathway disruption in brain PNET, we generated a transgenic mouse where cyclin D1 was expressed in pineal cells. Cyclin D1 enhanced pinealocyte proliferation, causing pineal gland enlargement. However, proliferation ceased beyond 2 weeks of age with reversal of Cdk4-mediated Rb phosphorylation despite continued expression of the transgene, and the pineal cells showed heterochromatin foci suggestive of a senescent-like state. In the absence of the p53 tumor suppressor, cell proliferation continued, resulting in pineal PNET that limited mouse survival to approximately 4 months. Interestingly, the Cdk inhibitor p18(Ink4c) was induced in the transgenic pineal glands independently of p53, and transgenic mice that lacked Ink4c developed invasive PNET, although at an older age than those lacking p53. Analogous to our mouse model, we found that children with heritable RB often had asymptomatic pineal gland enlargement that only rarely progressed to PNET. Our finding that the Cdk4 inhibitor p18(Ink4c) is a tumor suppressor in cyclin D1-driven PNET suggests that pharmacologic interventions to inhibit Cdk4 activity may be a useful chemoprevention or therapeutic strategy in cancer driven by primary RB pathway disruption. PMID:19147556

  6. Expression of human epidermal growth factor receptor 2 in primary and paired parenchymal recurrent and/or metastatic sites of gastric cancer.

    PubMed

    Shibata, Ryosuke; Nimura, Satoshi; Hashimoto, Tatsuya; Miyake, Toru; Takeno, Shinsuke; Hoshino, Seiichiro; Nabeshima, Kazuki; Yamashita, Yuichi

    2014-09-01

    Human epidermal growth factor receptor 2 (HER2) status has been evaluated at the primary site of gastric cancer when planning trastuzumab therapy against recurrent or metastatic lesions, since tissue sampling is uncommon in recurrent or metastatic lesions. This study retrospectively investigated the concordance of HER2 expression between primary and metastatic/recurrent lesions in order to confirm sensitivity to trastuzumab. The subjects comprised 37 patients with gastric adenocarcinoma who underwent tissue biopsy or surgical resection of the primary sites and 49 paired synchronous or metachronous metastatic sites (excluding lymph nodes) at the Fukuoka University Hospital between January, 1998 and September, 2012. All the samples were evaluated for HER2 status at the invasive front by immunohistochemistry (IHC). The HER2 positivity rate of the primary sites was ~16% and the concordance ratio of the IHC results between primary and paired metastatic sites was ~97%. No discordant cases regarding HER2 status were found among metachronous interventions for metastatic lesions. Only one patient exhibited conversion from a HER2-negative status in all the portions of the primary site to a positive status in a metastatic site. In conclusion, a high concordance ratio for HER2 status was observed between primary and paired metastatic lesions. Thus, employing trastuzumab therapy against metastatic or recurrent gastric cancer based on the HER2 status of the primary lesion appears to be an acceptable approach. PMID:25054041

  7. Long-term survival of a patient with small cell carcinoma of the stomach with metachronous lung metastases treated by multimodal therapy: a case report.

    PubMed

    Aoyagi, Keishiro; Kizaki, Junya; Isobe, Taro; Akagi, Yoshito

    2015-12-01

    A 69-year-old man was referred to our institution for treatment of gastric cancer. Type 2 gastric cancer was found on the anterior wall of the lower body of the stomach.The patient underwent distal gastrectomy, D2 lymph node dissection, and Roux-en-Y reconstruction with curative resection. The tumor was diagnosed as a small cell carcinoma of the stomach. Recurrence occurred in the lung after surgery. The patient underwent several chemoradiation therapy regimens, including cisplatin + irinotecan + radiation, S-1 + paclitaxel, amrubicin, carboplatin + etoposide, nogitecan, and docetaxel for lung metastases and radiation for brain and bone metastases for 43 months. He finally died of brain metastases 74 months after surgery (47 months after recognition of the lung metastases). Long continuous multimodal treatment including surgery, regimens for small cell lung cancer, S-1, taxanes, and radiation was thought to prolong the survival of this man with small cell carcinoma of the stomach. PMID:26943449

  8. Primitive magmas at five Cascade volcanic fields: Melts from hot, heterogeneous sub-arc mantle

    USGS Publications Warehouse

    Bacon, C.R.; Bruggman, P.E.; Christiansen, R.L.; Clynne, M.A.; Donnelly-Nolan, J. M.; Hildreth, W.

    1997-01-01

    Major and trace element concentrations, including REE by isotope dilution, and Sr, Nd, Pb, and O isotope ratios have been determined for 38 mafic lavas from the Mount Adams, Crater Lake, Mount Shasta, Medicine Lake, and Lassen volcanic fields, in the Cascade arc, northwestern part of the United States. Many of the samples have a high Mg# [100Mg/(Mg + FeT) > 60] and Ni content (>140 ppm) such that we consider them to be primitive. We recognize three end-member primitive magma groups in the Cascades, characterized mainly by their trace-element and alkali-metal abundances: (1) High-alumina olivine tholeiite (HAOT) has trace element abundances similar to N-MORB, except for slightly elevated LILE, and has Eu/Eu* > 1. (2) Arc basalt and basaltic andesite have notably higher LILE contents, generally have higher SiO2 contents, are more oxidized, and have higher Cr for a given Ni abundance than HAOT. These lavas show relative depletion in HFSE, have lower HREE and higher LREE than HAOT, and have smaller Eu/Eu* (0.94-1.06). (3) Alkali basalt from the Simcoe volcanic field east of Mount Adams represents the third end-member, which contributes an intraplate geochemical signature to magma compositions. Notable geochemical features among the volcanic fields are: (1) Mount Adams rocks are richest in Fe and most incompatible elements including HFSE; (2) the most incompatible-element depleted lavas occur at Medicine Lake; (3) all centers have relatively primitive lavas with high LILE/HFSE ratios but only the Mount Adams, Lassen, and Medicine Lake volcanic fields also have relatively primitive rocks with an intraplate geochemical signature; (4) there is a tendency for increasing 87Sr/86Sr, 207Pb/204Pb, and ??18O and decreasing 206Pb/204Pb and 143Nd/144Nd from north to south. The three end-member Cascade magma types reflect contributions from three mantle components: depleted sub-arc mantle modestly enriched in LILE during ancient subduction; a modern, hydrous subduction component

  9. The influence of speckle suppressing on primitive line segments extraction from sar imagery

    NASA Astrophysics Data System (ADS)

    Jia, Chengli

    One of the common approaches of shape recognition in grey-scale images is primitive extraction, which is the basis of object description by primitives. Straight lines, with simple expressions, can reflect the globally geometrical information of objects; therefore the straight-line-based primitive is the most widely used Intermediate Symbol in extraction of liner objects such as road and airport runway. We call the straight-line-based primitive PL (primitive line segment) in this paper. SAR image is degraded by a form of multiplicative noise known as speckle which is a result of the illumination by the coherent radar. Speckle noise makes the linear objects extraction very difficult. Because of its undesirable effect, in the early days, speckle suppressing was an important task in the research field of SAR interpretation. But almost all the speckle filters are the compromise of speckle reducing and edge preserving. Therefore the problem whether speckle filtering is able to improve the performance of primitive line segments extraction or not is worth discussing. In this paper, we discuss the influence of speckle suppressing on PL extraction of SAR Images by comparing the performance of PL extraction on undespeckled SAR images with that on despeckled SAR images. There are some PL extraction algorithms. We use the three well-known ones to extract PLs: the method based on phase grouping, the method based on template matching and the method based on the Radon transform. While an extensive literature exists on the problem of PL extraction, most of the researches only give qualitative analysis of the behavior of PL extraction, made by a visual comparison of different results. To provide a solution, in this paper we propose a set of quantitative evaluation metrics to determine how many lines are correctly extracted. The basic idea is to compare the extracted PLs with the lines in the ground truth data, thus the performance of the PL extraction can be showed through a series

  10. Origin of primitive andesites by melt-rock reaction in the sub-arc mantle (Invited)

    NASA Astrophysics Data System (ADS)

    Rapp, R. P.

    2009-12-01

    The genetic relationship between primitive granitoids, including high-Mg andesites (HMAs) and bajaites, and primary granitoids, or "pristine" adakites, has been vigorously debated since Defant and Drummond (1991; henceforth D&D) first applied the term "adakite" to refer to Cenozoic arc magmas (andesites and dacites) "associated with young subducting lithosphere", with low Y and Yb, low high-field strength elements (HFSEs), high Sr, and high Sr/Y and (La/Yb)N ratios "relative to island arc andesite-dacite-rhyolite". These characteristics were attributed to an origin for adakites by partial melting of basaltic crust within the subducting slab (hence "slab melts"). That such a process can produce melts with the characteristics described by D&D has since been largely confirmed by dehydration melting experiments on hydrous metabasalt at ~1-4 GPa. Attention was also drawn to the geochemical similarities between "adakites" and large-ion lithophile element (LILE)-enriched, high-field strength element (HFSE) depleted magnesian andesites (HMAs) from Adak Island in the western Aleutians, first described by Kay (1978), implying a genetic relationship between primary granitoid (adakites) formed by partial melting of basaltic ocean crust in the subducting slab, transformed to garnet-amphibolite or eclogite, and primitive magnesian andesites (HMAs) with high Mg-numbers (Mg# = molar Mg/(Mg+Fe)x100) and high concentrations of Ni and Cr. What then is the true origin of these enigmatic arc magmas, with both crustal and mantle, derivative and primitive, geochemical signatures? Kay (1978) suggested a "hybrid" model, in which "hydrous melting of eclogite (slab melting) results in a small volume of dacitic melt ("pristine adakite"), which rises into the hotter overlying peridotite wedge and equilibrates with olivine and orthopyroxene, reacting with olivine until it becomes andesitic". In this paper, I will discuss the results of melt-rock reaction experiments modelling this peridotite

  11. Primitive Magnesian Andesites at Mt. Shasta, California: A Real Mix-up

    NASA Astrophysics Data System (ADS)

    Barr, J. A.; Grove, T. L.; Carlson, R. W.; Krawczynski, M. J.

    2009-12-01

    Until recently, the only described occurrence of primitive magnesian andesite (PMA) at Mt. Shasta was a cinder-pit in the saddle between Whaleback and Deer Mtns. (Location S-17 of Anderson, 1974), north of the main edifice of the volcano. We have reinvestigated PMA occurrence and collected samples from other nearby vents and associated lava flows to provide better constraints on the magmatic processes that led to the formation of this important magma type. The petrology of the PMA samples from S-17 and the newly recognized PMA occurrences nearby, point to a mixing scenario, in which a PMA is the dominant component in the mixed magma. This stands in contrast to other suggestions in which the PMA is created by mixing melts that differ strongly in composition from the PMA. This idea is not new, and previous researchers (e.g. Grove et al., 2005) have shown that crustal-level fractionation products of PMA lavas are one of the major mixing components in the Mt. Shasta plumbing system. The addition of new samples of PMA indicate that the erupted magma was a multi-component mix of two primitive magmas, the PMA and a primitive basaltic andesite (BA) as well as a minor component of evolved andesite or dacite lava. Mineral compositional data, major and trace element systematics, and Sr, Nd and Re/Os isotopic data on the expanded PMA data set provides additional constraints on the mantle melting, crustal level fractional crystallization and magma mixing processing at work underneath Mt. Shasta. The compositional evidence from surrounding lava flows better constrains the composition of the PMA end member involved in the magma mixing at ~ 57.5 wt. % SiO2 at 10.5 wt. % MgO. Petrologic and isotopic data also firmly rule out the possibility suggested by Streck et al. (2007) that the Shasta PMA was formed by mixing an evolved Shasta dacite and Trinity peridotite.

  12. Versatility of `hemorheologic fitness' according to exercise intensity: emphasis on the "healthy primitive lifestyle"

    NASA Astrophysics Data System (ADS)

    Brun, Jean-Frédéric; Varlet-Marie, Emmanuelle; Chevance, Guillaume; Pollatz, Marion; Fedou, Christine; de Mauverger, Eric Raynaud

    2014-05-01

    We recently proposed a unifying hypothesis to reconcile unexpected findings in exercise hemorheology and the classical concepts of "hemorheologic fitness" and the "triphasic effects of exercise", based on the "healthy primitive lifestyle" paradigm. This paradigm assumes that evolution has selected genetic polymorphisms leading to insulin resistance as an adaptative strategy to cope with continuous low intensity physical activity and a special alimentation moderately high in protein, rich in low glycemic index carbohydrates, and poor in saturated fat. According to this protocol the true physiological picture would be that of an individual whose exercise and nutritional habits are close from this lifestyle, both sedentary subjects and trained athletes representing situations on the edge of this model. Unfortunately samples of people truly adhering to this ancestral lifestyle are hard to obtain. In order to address this picture we tried to compare databases obtained with our preceding published studies. As a model of the "healthy primitive lifestyle" we selected patients trained at low intensity (LI) and given an advice of protein intake around 1.2 g/kg/day. Results show a continuum for plasma viscosity which seems to be lower in athletes than LI-trained and even more sedentaries. When sedentary subjects become obese the most obvious characteristic is an increase in red blood cell (RBC) aggregation correlated to the size of fat stores. It is clear that 3 months of LI are not a perfect model of "healthy primitive lifestyle", but these data suggest that the most important effect of LI regular exercise is to decrease plasma viscosity and that sedentarity increases RBC aggregation mostly when it results in increased fat storage.

  13. De novo synthesis and functional study of primitive polypeptides in the prebiotic protein world

    NASA Astrophysics Data System (ADS)

    Fujishima, Kosuke; Wang, Kendrick; Ferreira, Raphael; Rothschild, Lynn

    DNA, RNA and proteins within a lipid-bound membrane are the core components of life, but the order of their appearance during the origin and evolution of life is still under debate. The widely accepted “RNA World” hypothesis states that RNA likely emerged prior to proteins and DNA since RNA can serve both replicative and catalytic roles. While biochemists have reproduced the synthesis, polymerization, and replication of nucleotides/RNA under controlled prebiotic conditions, such complex organic molecules were not present in significant amounts on the prebiotic Earth. In contrast, amino acids are naturally abundant in various prebiotic contexts such as carbonaceous chondrites and Urey-Miller type experiments, and many studies have demonstrated plausible prebiotic conditions that could condense/polymerize amino acids to give rise to short peptides. These findings support the basis of a “Protein World” hypothesis for life, however little has been done to study the functions of such primitive peptides. Here, we present a novel synthetic biology-based approach to the de novo synthesis of over billions of primitive peptides/proteins derived from a limited set of naturally abundant proteinogenic amino acids. Of these peptides, ones with divalent metal-binding capability are of particular interest and will be screened and identified. Certain divalent metals are likely present in prebiotic environments and both coordinate well with amino acids and catalyze reactions, which are difficult to achieve in organic chemistry. Furthermore, since D-chiral and non-proteinogenic amino acids are also abundant in the universe and may provide insight into the pathway by which life developed, the methods to analyze primitive peptides consisting of these amino acids will be discussed. By understanding this natural pathway, we will be able to better understand how life developed here on Earth and the probability of life arising elsewhere.

  14. Early cosmic ray irradiation of chondrules and prolonged accretion of primitive meteorites

    NASA Astrophysics Data System (ADS)

    Beyersdorf-Kuis, Uta; Ott, Ulrich; Trieloff, Mario

    2015-08-01

    Chondrules, together with Ca-Al-rich inclusions (CAIs) and matrix, are the major constituents of primitive meteorites. It is clear that chondrules formed as molten objects and the conditions under which this happened seem well constrained. Partially overlapping in age, but mostly ∼2-3 million years younger than the CAIs, they appear to have formed over an extended period of time (e.g., Kita et al., 2013). We have analyzed chondrules in two highly primitive CR3 meteorites, QUE 99177 and MET 00426, and find that they contain highly variable amounts of noble gases produced by irradiation with cosmic rays. The lack of implanted solar wind and the composition of the cosmogenic component in QUE 99177 chondrules argue against irradiation in a parent body regolith, which leaves irradiation in the early solar system as the most likely explanation. The cosmogenic composition also points to irradiation primarily by galactic cosmic rays (GCR), not solar cosmic rays (SCR), i.e. not by an active early sun. To allow effective production of cosmogenic isotopes by GCR, but not SCR, this should have happened rather "late" in a largely, but not completely, dust-free environment. Our results support the suggestion that chondrules formed as free-floating objects in the solar nebula; also consistent with the noble gas data is pre-irradiation in small (∼dm-size) aggregates that broke up before or during accretion to the CR parent body. In both cases, chondrules spent an extended period of time before incorporation into the most primitive meteorite parent bodies, which puts constraints on accretion time scales.

  15. Memory efficient solution of the primitive equations for numerical weather prediction on the CYBER 205

    NASA Technical Reports Server (NTRS)

    Tuccillo, J. J.

    1984-01-01

    Numerical Weather Prediction (NWP), for both operational and research purposes, requires only fast computational speed but also large memory. A technique for solving the Primitive Equations for atmospheric motion on the CYBER 205, as implemented in the Mesoscale Atmospheric Simulation System, which is fully vectorized and requires substantially less memory than other techniques such as the Leapfrog or Adams-Bashforth Schemes is discussed. The technique presented uses the Euler-Backard time marching scheme. Also discussed are several techniques for reducing computational time of the model by replacing slow intrinsic routines by faster algorithms which use only hardware vector instructions.

  16. Crystallization of the Focal Adhesion Kinase Targeting (FAT) Domain in a Primitive Orthorhombic Space Group

    SciTech Connect

    Magis,A.; Bailey, K.; Kurenova, E.; Hernandez Prada, J.; Cance, W.; Ostrov, D.

    2008-01-01

    X-ray diffraction data from the targeting (FAT) domain of focal adhesion kinase (FAK) were collected from a single crystal that diffracted to 1.99 Angstroms resolution and reduced to the primitive orthorhombic lattice. A single molecule was predicted to be present in the asymmetric unit based on the Matthews coefficient. The data were phased using molecular-replacement methods using an existing model of the FAK FAT domain. All structures of human focal adhesion kinase FAT domains solved to date have been solved in a C-centered orthorhombic space group.

  17. Amino acid codes in mitochondria as possible clues to primitive codes

    NASA Technical Reports Server (NTRS)

    Jukes, T. H.

    1981-01-01

    Differences between mitochondrial codes and the universal code indicate that an evolutionary simplification has taken place, rather than a return to a more primitive code. However, these differences make it evident that the universal code is not the only code possible, and therefore earlier codes may have differed markedly from the previous code. The present universal code is probably a 'frozen accident.' The change in CUN codons from leucine to threonine (Neurospora vs. yeast mitochondria) indicates that neutral or near-neutral changes occurred in the corresponding proteins when this code change took place, caused presumably by a mutation in a tRNA gene.

  18. The diophantine equation hard problem (DEHP) as an asymmetric primitive - Is it possible?

    NASA Astrophysics Data System (ADS)

    Kamel Ariffin, Muhammad Rezal

    2013-09-01

    We put forward a probable hard problem based on a Diophantine equation that has characteristics to become an asymmetric primitive. Motivated by rearranging the equation representing the RSA modulus, N together with its Euler-phi function, φ(N) we define the Diophantine Equation Hard Problem (DEHP) on a definitive setting. Relation between the RSA factorization problem, RSA's e-th root problem and the DEHP is also discussed. A proposed asymmetric cryptosystem that manipulates DEHP together with the difficulty of factoring a product of strong primes is presented.

  19. Resolution of trigeminal neuralgia by coil embolization of a persistent primitive trigeminal artery aneurysm

    PubMed Central

    Ladner, Travis R; Ehtesham, Moneeb; Davis, Brandon J; Khan, Imad S; Ghiassi, Mayshan; Ghiassi, Mahan; Singer, Robert J

    2013-01-01

    The persistent primitive trigeminal artery (PTA) is a rare anastomosis between the carotid artery and basilar artery. While most PTAs are asymptomatic, lateral variants can occasionally compress the trigeminal nerve and precipitate trigeminal neuralgia. Aneurysms of the PTA are exceptionally rare in the literature and have not previously been associated with trigeminal neuralgia. We present the first case of an aneurysm of the PTA causing trigeminal neuralgia. The patient underwent coil embolization of the aneurysm which relieved her symptoms. We propose embolization as a viable therapeutic option for the resolution of trigeminal neuralgia when the condition is secondary to irritation by the high velocity pulsatile flow of an aneurysm. PMID:23625680

  20. Resolution of trigeminal neuralgia by coil embolization of a persistent primitive trigeminal artery aneurysm.

    PubMed

    Ladner, Travis R; Ehtesham, Moneeb; Davis, Brandon J; Khan, Imad S; Ghiassi, Mayshan; Ghiassi, Mahan; Singer, Robert J

    2013-01-01

    The persistent primitive trigeminal artery (PTA) is a rare anastomosis between the carotid artery and basilar artery. While most PTAs are asymptomatic, lateral variants can occasionally compress the trigeminal nerve and precipitate trigeminal neuralgia. Aneurysms of the PTA are exceptionally rare in the literature and have not previously been associated with trigeminal neuralgia. We present the first case of an aneurysm of the PTA causing trigeminal neuralgia. The patient underwent coil embolization of the aneurysm which relieved her symptoms. We propose embolization as a viable therapeutic option for the resolution of trigeminal neuralgia when the condition is secondary to irritation by the high velocity pulsatile flow of an aneurysm. PMID:23625680

  1. Coil embolization of an aneurysm located at the trunk of the persistent primitive trigeminal artery.

    PubMed

    Kai, Yutaka; Ohmori, Yuki; Watanabe, Masaki; Morioka, Motohiro; Hirano, Teruyuki; Kawano, Takayuki; Sakurama, Tomotaka; Miura, Akiko; Kuratsu, Jun-Ichi

    2011-01-01

    A 71-year-old woman presented with an aneurysm at the trunk of the persistent primitive trigeminal artery (PPTA) manifesting as subarachnoid hemorrhage. Angiography and three-dimensional computed tomography revealed a wide-necked saccular aneurysm at the trunk of the left PPTA. Coil embolization with the balloon-assist technique was successful and PPTA patency was preserved. Preoperative conventional angiography should be performed to check for cross-filling of the PPTA. This case demonstrates that an aneurysm of the trunk of the PPTA can be successfully treated by coil embolization using the balloon-assist technique. PMID:21613761

  2. Resolution of trigeminal neuralgia by coil embolization of a persistent primitive trigeminal artery aneurysm.

    PubMed

    Ladner, Travis R; Ehtesham, Moneeb; Davis, Brandon J; Khan, Imad S; Ghiassi, Mayshan; Ghiassi, Mahan; Singer, Robert J

    2014-04-01

    The persistent primitive trigeminal artery (PTA) is a rare anastomosis between the carotid artery and basilar artery. While most PTAs are asymptomatic, lateral variants can occasionally compress the trigeminal nerve and precipitate trigeminal neuralgia. Aneurysms of the PTA are exceptionally rare in the literature and have not previously been associated with trigeminal neuralgia. We present the first case of an aneurysm of the PTA causing trigeminal neuralgia. The patient underwent coil embolization of the aneurysm which relieved her symptoms. We propose embolization as a viable therapeutic option for the resolution of trigeminal neuralgia when the condition is secondary to irritation by the high velocity pulsatile flow of an aneurysm. PMID:24610143

  3. Using Very Small Rovers to Explore the Surface of Primitive Bodies

    NASA Technical Reports Server (NTRS)

    Vane, Gregg

    2008-01-01

    This slide presentation reviews the use of very small roving vehicles to assist in exploration of various primitive bodies in the Solar System. It reviews the lessons learned from the mobility of the rovers on Mars, and the importance of the what we learned from these rovers. It also examines the core payload for the what would be a new class of rovers, that include a camera, and spectrometer. It also briefly reviews the MUSES-C (i.e., Hyabusa) mission for which a nano-rover had been planned. A prototype of the rover is shown, along with some of the characteristics.

  4. A chemical and isotopic study of hibonite-rich refractory inclusions in primitive meteorites

    NASA Technical Reports Server (NTRS)

    Hinton, Richard W.; Davis, Andrew M.; Scatena-Wachel, Debra E.; Grossman, Lawrence; Draus, Ronald J.

    1988-01-01

    Isotopic and chemical analyses of hibonite-rich inclusions from a number of primitive meteorites and, in some cases, of coexisting minerals from carbonaceous and ordinary chondrites, were carried out using ion microprobe (IP). The results of the IP analyses were compared with literature data obtained by INAA and electron microprobe analysis. Results showed that the trace element patterns of the hibonite inclusions analyzed have a number of feautures in common. The results are discussed with reference to the possible chemical processes operating early in the history of the solar system.

  5. Pb isotopes in anorthositic breccias 67075 and 62237 - A search for primitive lunar lead

    NASA Technical Reports Server (NTRS)

    Premo, W. R.; Tatsumoto, M.; Wang, J.-W.

    1989-01-01

    The lunar Pb isotopic evolution is explored based on an investigation of the U-Th-Pb systematics of the primitive Apollo 16 anorthositic breccias 76075 and 62237. The isotope data for acid-leached residues from 67075 lie within or on a triangle formed by plagioclase, opaques, and a pyroxen-olivine mixture, and the isotope data for 62237 lie within or on a triangle formed by plagioclase, olivine, and pyroxene. The results suggest that the moon had high first-stage values for the Pb evolution equations from the onset.

  6. A human supervisory approach to rapid world modeling through the use of geometric primitives

    SciTech Connect

    Luck, J.; Roberts, R.

    1997-08-11

    A three-dimensional world model is crucial for many robot-oriented tasks. The most efficient mapping configuration use geometric primitives to model environments, and are easy to store and process. In the past, modeling techniques have been either fully manual or autonomous. Manual methods are extremely time consuming but also highly accurate and flexible. On the other hand autonomous techniques are fast but inflexible and often inaccurate. The method presented in this paper combines the two thereby yielding a highly efficient, flexible, and accurate tool. Our methods enable a human supervisor to quickly construct a fully defined world model from unfiltered and unsegmented real-world range data.

  7. [Primitive psoas abscess in children; diagnostic difficulties and non surgical treatment: apropos of 2 cases].

    PubMed

    Doumbouya, N; N'Goan-Domoua, A M; Aguehounde, C; De Silva-Anoma, S; Roux, C

    1998-01-01

    From an analysis of two files of children carriers of primitive psoas abscess, the authors report the difficulties of diagnosis due to the rarity of this affection and the similarities of its symptomatology with ostearthritis of the hip which is a common pathology at the pediatric surgery unit of C.H.U. Yopougon (Republic of Côte d'Ivoire). A non surgical treatment made of antibiotherapy and traction fixed in the axis of the limb is proposed, since it helped the two patients who had presented an echographical stage II of psoas abcess to recover without after-effects. PMID:9642471

  8. [The voluminous primitive psoas abscess in children: report of three cases].

    PubMed

    Rantomalala, H Y H; Rakotoarisoa, A J C; Rakotoarisoa, B; Andriamanarivo, M L; Rakototiana, A; Kapisy, J F

    2005-01-01

    The primitive psoas abscess is a pathology extremely rare in the child. The diagnosis is difficult and often delayed. Their treatment requires a local and general sterilization of the infection. We report three observations of primary abscess of the psoas in the child. The clinic presentation is uncommon. Ultrasonography keeps an important place. The biology objective an infectious and inflammatory syndrome. Histology permits to put in evidence all shapes association of lesions. The bacteriological survey of the pus after drainage is only positive in one case. Surgical drainage with bactericidal antibiotherapy permit a definitive recovery. PMID:15653066

  9. Lower brainstem dysfunction in an infant with persistent primitive trigeminal artery.

    PubMed

    Okanishi, Tohru; Saito, Yoshiaki; Miki, Shiho; Nagaishi, Jun-Ichi; Hanaki, Keiichi; Tomita, Yutaka; Fukuda, Chisako; Fujii, Shinya; Fujiwara, Kazunori; Kawamoto, Katsuyuki; Hata, Fumiko; Maegaki, Yoshihiro; Ohno, Kousaku

    2007-04-01

    A 6-month-old boy with persistent primitive trigeminal artery (PPTA) presented with stridor, dysphagia, delayed motor development and postural neck and shoulder dystonia. Magnetic resonance imaging/angiography and ultrasonography revealed PPTA, with flow from the dilated basilar artery to the right internal carotid artery, lower brainstem compression by the dilated basilar artery, and cerebellar vermis hypoplasia. Evoked potentials showed lower pons and medulla oblongata functional disruption. These lesions may be related to vascular etiology in the lower brainstem or to congenital malformation syndrome involving infratentorial structures. The relationship of this condition to Möbius syndrome is discussed. PMID:17008040

  10. HCN - A plausible source of purines, pyrimidines and amino acids on the primitive earth

    NASA Technical Reports Server (NTRS)

    Ferris, J.-P.; Joshi, P. C.; Edelson, E. H.; Lawless, J. G.

    1978-01-01

    Dilute (0.1 M) solutions of HCN condense to oligomers at pH 9.2, and hydrolysis of these oligomers yields 4,5-dihydroxypyrimidine, orotic acid, 5-hydroxyuracil, adenine, 4-aminoimidazole-5-carboxamide, and amino acids. It is suggested that the three main classes of nitrogen-containing biomolecules - purines, pyrimidines, and amino acids may have originated from HCN on the primitive earth. It is also suggested that the presence of orotic acid and 4-aminoimidazole-5-carboxamide might indicate that contemporary biosynthetic pathways for nucleotides evolved from the compounds released on hydrolysis of HCN oligomers.

  11. Signaling hunger through aggression—the regulation of foraging in a primitively eusocial wasp

    NASA Astrophysics Data System (ADS)

    Lamba, Shakti; Chandrasekhar, K.; Gadagkar, Raghavendra

    2008-07-01

    Primitively eusocial wasps are generally headed by behaviorally dominant queens who use their aggression to suppress worker reproduction. In contrast, queens in the primitively eusocial wasp Ropalidia marginata are strikingly docile and non-aggressive. However, workers exhibit dominance-subordinate interactions among themselves. These interactions do not appear to reflect reproductive competition because there is no correlation between the relative position of an individual in the dominance hierarchy of the colony and the likelihood that she will succeed a lost/removed queen. Based on the observation that foraging continues unaltered in the absence of the queen and the correlation between dominance behavior and foraging, we have previously suggested that dominance-subordinate interactions among workers in R. marginata have been co-opted to serve the function of decentralized, self-organized regulation of foraging. This idea has been supported by an earlier experimental study where it was found that a reduced demand for food led to a significant decrease in dominance behavior. In this study, we perform the converse experiment, demonstrate that dominance behavior increases under conditions of starvation, and thus provide further evidence in support of the hypothesis that intranidal workers signal hunger through aggression.

  12. The neonatal marmoset monkey ovary is very primitive exhibiting many oogonia

    PubMed Central

    Fereydouni, B; Drummer, C; Aeckerle, N; Schlatt, S; Behr, R

    2014-01-01

    Oogonia are characterized by diploidy and mitotic proliferation. Human and mouse oogonia express several factors such as OCT4, which are characteristic of pluripotent cells. In human, almost all oogonia enter meiosis between weeks 9 and 22 of prenatal development or undergo mitotic arrest and subsequent elimination from the ovary. As a consequence, neonatal human ovaries generally lack oogonia. The same was found in neonatal ovaries of the rhesus monkey, a representative of the old world monkeys (Catarrhini). By contrast, proliferating oogonia were found in adult prosimians (now called Strepsirrhini), which is a group of ‘lower’ primates. The common marmoset monkey (Callithrix jacchus) belongs to the new world monkeys (Platyrrhini) and is increasingly used in reproductive biology and stem cell research. However, ovarian development in the marmoset monkey has not been widely investigated. Herein, we show that the neonatal marmoset ovary has an extremely immature histological appearance compared with the human ovary. It contains numerous oogonia expressing the pluripotency factors OCT4A, SALL4, and LIN28A (LIN28). The pluripotency factor-positive germ cells also express the proliferation marker MKI67 (Ki-67), which has previously been shown in the human ovary to be restricted to premeiotic germ cells. Together, the data demonstrate the primitiveness of the neonatal marmoset ovary compared with human. This study may introduce the marmoset monkey as a non-human primate model to experimentally study the aspects of primate primitive gonad development, follicle assembly, and germ cell biology in vivo. PMID:24840529

  13. Cooperation between non-relatives in a primitively eusocial paper wasp, Polistes dominula.

    PubMed

    Field, Jeremy; Leadbeater, Ellouise

    2016-02-01

    In cooperatively breeding vertebrates, the existence of individuals that help to raise the offspring of non-relatives is well established, but unrelated helpers are less well known in the social insects. Eusocial insect groups overwhelmingly consist of close relatives, so populations where unrelated helpers are common are intriguing. Here, we focus on Polistes dominula-the best-studied primitively eusocial wasp, and a species in which nesting with non-relatives is not only present but frequent. We address two major questions: why individuals should choose to nest with non-relatives, and why such individuals participate in the costly rearing of unrelated offspring. Polistes dominula foundresses produce more offspring of their own as subordinates than when they nest independently, providing a potential explanation for co-founding by non-relatives. There is some evidence that unrelated subordinates tailor their behaviour towards direct fitness, while the role of recognition errors in generating unrelated co-foundresses is less clear. Remarkably, the remote but potentially highly rewarding chance of inheriting the dominant position appears to strongly influence behaviour, suggesting that primitively eusocial insects may have much more in common with their social vertebrate counterparts than has commonly been thought. PMID:26729932

  14. Physical effects underlying the transition from primitive to modern cell membranes

    PubMed Central

    Budin, Itay; Szostak, Jack W.

    2011-01-01

    To understand the emergence of Darwinian evolution, it is necessary to identify physical mechanisms that enabled primitive cells to compete with one another. Whereas all modern cell membranes are composed primarily of diacyl or dialkyl glycerol phospholipids, the first cell membranes are thought to have self-assembled from simple, single-chain lipids synthesized in the environment. We asked what selective advantage could have driven the transition from primitive to modern membranes, especially during early stages characterized by low levels of membrane phospholipid. Here we demonstrate that surprisingly low levels of phospholipids can drive protocell membrane growth during competition for single-chain lipids. Growth results from the decreasing fatty acid efflux from membranes with increasing phospholipid content. The ability to synthesize phospholipids from single-chain substrates would have therefore been highly advantageous for early cells competing for a limited supply of lipids. We show that the resulting increase in membrane phospholipid content would have led to a cascade of new selective pressures for the evolution of metabolic and transport machinery to overcome the reduced membrane permeability of diacyl lipid membranes. The evolution of phospholipid membranes could thus have been a deterministic outcome of intrinsic physical processes and a key driving force for early cellular evolution. PMID:21402937

  15. Physical effects underlying the transition from primitive to modern cell membranes.

    PubMed

    Budin, Itay; Szostak, Jack W

    2011-03-29

    To understand the emergence of Darwinian evolution, it is necessary to identify physical mechanisms that enabled primitive cells to compete with one another. Whereas all modern cell membranes are composed primarily of diacyl or dialkyl glycerol phospholipids, the first cell membranes are thought to have self-assembled from simple, single-chain lipids synthesized in the environment. We asked what selective advantage could have driven the transition from primitive to modern membranes, especially during early stages characterized by low levels of membrane phospholipid. Here we demonstrate that surprisingly low levels of phospholipids can drive protocell membrane growth during competition for single-chain lipids. Growth results from the decreasing fatty acid efflux from membranes with increasing phospholipid content. The ability to synthesize phospholipids from single-chain substrates would have therefore been highly advantageous for early cells competing for a limited supply of lipids. We show that the resulting increase in membrane phospholipid content would have led to a cascade of new selective pressures for the evolution of metabolic and transport machinery to overcome the reduced membrane permeability of diacyl lipid membranes. The evolution of phospholipid membranes could thus have been a deterministic outcome of intrinsic physical processes and a key driving force for early cellular evolution. PMID:21402937

  16. CD71(high) population represents primitive erythroblasts derived from mouse embryonic stem cells.

    PubMed

    Chao, Ruihua; Gong, Xueping; Wang, Libo; Wang, Pengxiang; Wang, Yuan

    2015-01-01

    The CD71/Ter119 combination has been widely used to reflect dynamic maturation of erythrocytes in vivo. However, because CD71 is expressed on all proliferating cells, it is unclear whether it can be utilized as an erythrocyte-specific marker during differentiation of embryonic stem cells (ESCs). In this study, we revealed that a population expressing high level of CD71 (CD71(high)) during mouse ESC differentiation represented an in vitro counterpart of yolk sac-derived primitive erythroblasts (EryPs) isolated at 8.5days post coitum. In addition, these CD71(high) cells went through "maturational globin switching" and enucleated during terminal differentiation in vitro that were similar to the yolk sac-derived EryPs in vivo. We further demonstrated that the formation of CD71(high) population was regulated differentially by key factors including Scl, HoxB4, Eaf1, and Klf1. Taken together, our study provides a technical advance that allows efficient segregation of EryPs from differentiated ESCs in vitro for further understanding molecular regulation during primitive erythropoiesis. PMID:25485690

  17. On the Kinematic Motion Primitives (kMPs) - Theory and Application.

    PubMed

    Moro, Federico L; Tsagarakis, Nikos G; Caldwell, Darwin G

    2012-01-01

    Human neuromotor capabilities guarantee a wide variety of motions. A full understanding of human motion can be beneficial for rehabilitation or performance enhancement purposes, or for its reproduction on artificial systems like robots. This work aims at describing the complexity of human motion in a reduced dimensionality, by means of kinematic Motion Primitives (kMPs). A set of five invariant kMPs are identified for periodic motions, and a set of two kMPs for discrete motions. It is shown how these two sets of kMPs can be combined to synthesize more complex motion as the simultaneous execution of the periodic and the discrete motions. The results reported are an evidence of the theory of Central Pattern Generators (CPG), showing its effects on the kinematics, and are related to what presented in the literature on the Motor Primitives extracted from EMG signals. Experimental tests with the COmpliant huMANoid (COMAN) were performed to show that the kMPs extracted from human subjects can be used to transfer the features of human locomotion to the gait of a robot. PMID:23091459

  18. Origin of organic compounds on the primitive earth and in meteorites.

    PubMed

    Miller, S L; Urey, H C; Oró, J

    1976-12-31

    The role and relative contributions of different forms of energy to the synthesis of amino acids and other organic compounds on the primitive earth, in the parent bodies or carbonaceous chondrites, and in the solar nebula are examined. A single source of energy or a single process would not account for all the organic compounds synthesized in the solar system. Electric discharges appear to produce amino acids more efficiently than other sources of energy and the composition of the synthesized amino acids is qualitatively similar to those found in the Murchison meteorite. Ultraviolet light is also likely to have played a major role in prebiotic synthesis. Although the energy in the sun's spectrum that can be absorbed by the major constituents of the primitive atmosphere is not large, reactive trace components such as H2S and formaldehyde absorb at longer wavelengths where greater amounts of energy are available and produce amino acids by reactions involving hot hydrogen atoms. The thermal reaction of CO + H2 + NH3 on Fischer-Tropsch catalysts generates intermediates that lead to amino acids and other organic compounds that have been found in meteorites. However, this synthesis appears to be less efficient than electric discharges and to require a special set of reaction conditions. It should be emphasized that after the reactive organic intermediates are generated by the above processes, the subsequent reactions which produce the more complete biochemical compounds are low temperature homogenous reactions occurring in an aqueous environment. PMID:1018332

  19. Neuropilin-2 genomic elements drive cre recombinase expression in primitive blood, vascular and neuronal lineages.

    PubMed

    Wiszniak, Sophie; Scherer, Michaela; Ramshaw, Hayley; Schwarz, Quenten

    2015-11-01

    We have established a novel Cre mouse line, using genomic elements encompassing the Nrp2 locus, present within a bacterial artificial chromosome clone. By crossing this Cre driver line to R26R LacZ reporter mice, we have documented the temporal expression and lineage traced tissues in which Cre is expressed. Nrp2-Cre drives expression in primitive blood cells arising from the yolk sac, venous and lymphatic endothelial cells, peripheral sensory ganglia, and the lung bud. This mouse line will provide a new tool to researchers wishing to study the development of various tissues and organs in which this Cre driver is expressed, as well as allow tissue-specific knockout of genes of interest to study protein function. This work also presents the first evidence for expression of Nrp2 protein in a mesodermal progenitor with restricted hematopoietic potential, which will significantly advance the study of primitive erythropoiesis. genesis 53:709-717, 2015. © 2015 Wiley Periodicals, Inc. PMID:26454009

  20. The atmosphere of the primitive earth and the prebiotic synthesis of organic compounds

    NASA Technical Reports Server (NTRS)

    Miller, S. L.; Schlesinger, G.

    1983-01-01

    The prebiotic synthesis of organic compounds is investigated using a spark discharge on various simulated prebiotic atmospheres at 25 C. It is found that glycine is almost the only amino acid produced from the model atmospheres containing CO and CO2. These results show that the maximum yield is about the same for the three carbon sources (CO, CO2, and CH4) at high H2/carbon ratios, but that CH4 is superior at low H2/carbon ratios. CH4 is found to yield a much greater variety of amino acids than either CO or CO2. If it is assumed that amino acids more complex than glycine were required for the origin of life, then these findings indicate the need for CH4 in the primitive atmosphere. The yields of cyanide and formaldehyde are shown to parallel the amino acid results, with yields of HCN and H2CO as high as 13 percent based on carbon. Ammonia is also found to be produced from N2 in experiments with no added NH3 in yields as high as 4.9 percent. These results indicate that large amounts of NH3 would have been synthesized on the primitive earth by electric discharges.

  1. Synthetic biology of minimal living cells: primitive cell models and semi-synthetic cells.

    PubMed

    Stano, Pasquale

    2010-09-01

    This article summarizes a contribution presented at the ESF 2009 Synthetic Biology focused on the concept of the minimal requirement for life and on the issue of constructive (synthetic) approaches in biological research. The attempts to define minimal life within the framework of autopoietic theory are firstly described, and a short report on the development of autopoietic chemical systems based on fatty acid vesicles, which are relevant as primitive cell models is given. These studies can be used as a starting point for the construction of more complex systems, firstly being inspired by possible origins of life scenarioes (and therefore by considering primitive functions), then by considering an approach based on modern biomacromolecular-encoded functions. At this aim, semi-synthetic minimal cells are defined as those man-made vesicle-based systems that are composed of the minimal number of genes, proteins, biomolecules and which can be defined as living. Recent achievements on minimal sized semi-synthetic cells are then discussed, and the kind of information obtained is recognized as being distinctively derived by a constructive approach. Synthetic biology is therefore a fundamental tool for gaining basic knowledge about biosystems, and it should not be confined at all to the engineering side. PMID:21886680

  2. Spectrum of hemoglobinopathies among the primitive tribes: a multicentric study in India.

    PubMed

    Mohanty, Dipika; Mukherjee, Malay B; Colah, Roshan B; Wadia, Mahrukh; Ghosh, Kanjaksha; Chottray, Guru Prasad; Jain, Dipty; Italia, Yazdi; Ashokan, Kumar S; Kaul, Rajni; Shukla, Deepak K; Muthuswamy, Vasantha

    2015-03-01

    We evaluated the spectrum of hemoglobinopathies among the primitive tribal groups from 4 states in India. A total of 15,200 individuals from 14 primitive tribal groups were studied by automated high-performance liquid chromatography. The hemoglobin S (HbS) allele frequency varied from 0.011 to 0.120 and the β-thalassemia allele frequency from 0.005 to 0.024. It is interesting to note that a very high HbS allele frequency was observed among the Dravidian (0.060-0.120) and Indo-European (0.060-0.076) as compared with Austro-Asiatic (0.011-0.022) speaking tribal groups. Although statistical analysis of the data did not show any ethnic differences within the states, regional differences were observed between the states for both HbS and β-thalassemia traits. HbS was found to be the most common hemoglobinopathy followed by β-thalassemia. A health plan for identifying sickle-cell homozygotes in the neonatal period with proper medical intervention is desirable. PMID:23513007

  3. Slab melting in the Aleutians: implications of an ion probe study of clinopyroxene in primitive adakite and basalt

    NASA Astrophysics Data System (ADS)

    Yogodzinski, G. M.; Kelemen, P. B.

    1998-05-01

    An ion probe study of trace elements in Mg-rich clinopyroxene phenocrysts in primitive Aleutian lavas provides constraints on the genesis of Aleutian adakites, and possible insights into the source of common Aleutian magmas. Clinopyroxene (cpx) phenocrysts in the primitive adakites have high Sr and Nd/Yb compared to cpx in Aleutian basalts. In the adakites, Sr and Nd/Yb are highest for high Mg# cpx, and these concentrations decrease toward lower Mg# compositions. These trends are the opposite of those seen in basalt cpx which generally show increasing incompatible trace element contents with decreasing Mg#, and are unlike antithetic compatible-incompatible trace element trends produced by chemical or kinetic effects of crystal growth. Petrographic observations and major and trace element zonation in cpx phenocrysts indicate that primitive Aleutian adakites are in part the product of mixing between primitive and relatively evolved magmas. The adakite trace element signature (high Sr, Nd/Yb) is clearly associated with the primitive mixing end-member. This observation supports the idea that adakites are derived by equilibration of slab melts with mantle olivine, and appears to rule out an origin by melting in the lower crust. Adakites are relatively rare in the Aleutians, but arc-wide correlations between Sr and La/Yb indicates that an adakite-type slab melt component may be present in the magmatic source throughout the arc.

  4. Differential regulation of primitive myelopoiesis in the zebrafish by Spi-1/Pu.1 and C/ebp1.

    PubMed

    Su, Fengyun; Juarez, Marianne A; Cooke, Christopher L; Lapointe, Lisa; Shavit, Jordan A; Yamaoka, Jennifer S; Lyons, Susan E

    2007-01-01

    The zebrafish has become a powerful tool for analysis of vertebrate hematopoiesis. Zebrafish, unlike mammals, have a robust primitive myeloid pathway that generates both granulocytes and macrophages. It is not clear how this unique primitive myeloid pathway relates to mammalian definitive hematopoiesis. In this study, we show that the two myeloid subsets can be distinguished using RNA in situ hybridization. Using a morpholino-antisense gene knockdown approach, we have characterized the hematopoietic defects resulting from knockdown of the myeloid transcription factor gene pu.1 and the unique zebrafish gene c/ebp1. Severe reduction of pu.1 resulted in complete loss of primitive macrophage development, with effects on granulocyte development only with maximal knockdown. Reduction of c/ebp1 did not ablate initial macrophage or granulocyte development, but resulted in loss of expression of the secondary granule gene lys C. These data reveal strong functional conservation of pu.1 between zebrafish primitive myelopoiesis and mammalian definitive myelopoiesis. Further, these results are consistent with a conserved role between c/ebp1 and mammalian C/EBPE, whose ortholog in zebrafish has not been identified. These studies validate the examination of zebrafish primitive myeloid development as a model for human myelopoiesis, and form a framework for identification and analysis of myeloid mutants. PMID:18041923

  5. Aqueous alteration on main belt primitive asteroids: Results from visible spectroscopy

    NASA Astrophysics Data System (ADS)

    Fornasier, S.; Lantz, C.; Barucci, M. A.; Lazzarin, M.

    2014-05-01

    This work focuses on the study of the aqueous alteration process which acted in the main belt and produced hydrated minerals on the altered asteroids. Hydrated minerals have been found mainly on Mars surface, on main belt primitive asteroids and possibly also on few TNOs. These materials have been produced by hydration of pristine anhydrous silicates during the aqueous alteration process, that, to be active, needed the presence of liquid water under low temperature conditions (below 320 K) to chemically alter the minerals. The aqueous alteration is particularly important for unraveling the processes occurring during the earliest times of the Solar System history, as it can give information both on the asteroids thermal evolution and on the localization of water sources in the asteroid belt. To investigate this process, we present reflected light spectral observations in the visible region (0.4-0.94 μm) of 80 asteroids belonging to the primitive classes C (prevalently), G, F, B and P, following the Tholen (Tholen, D.J. [1984]. Ph.D. Dissertation, University of Arizona, Tucson). classification scheme. We find that about 65% of the C-type and all the G-type asteroids investigated reveal features suggesting the presence of hydrous materials, mainly a band centered around 0.7 μm, while we do not find evidence of hydrated materials in the other low albedo asteroids (B, F, and P) investigated. We combine the present observations with the visible spectra of asteroids available in the literature for a total of 600 primitive main belt asteroids. We analyze all these spectra in a similar way to characterize the absorption band parameters (band center, depth and width) and spectral slope, and to look for possible correlations between the aqueous alteration process and the asteroids taxonomic classes, orbital elements, heliocentric distances, albedo and sizes. Our analysis shows that the aqueous alteration sequence starts from the P-type objects, practically unaltered, and

  6. The Role of Hyperthermic Intraperitoneal Chemotherapy in Gastric Cancer.

    PubMed

    Seshadri, Ramakrishnan Ayloor; Glehen, Olivier

    2016-06-01

    Peritoneal metastasis, either synchronous or metachronous, is commonly seen in gastric cancer. It is associated with a poor prognosis, with a median survival of less than one year. The outcomes are not significantly improved by the use of systemic chemotherapy. We review the relevant literature on the role of HIPEC in gastric cancer. Cytoreductive surgery (CRS) and hyperthermic intraperitoneal chemotherapy (HIPEC) has been used in three situations in gastric cancer. Besides its role as a definitive treatment in patients with established peritoneal metastasis (PM), it has been used as a prophylaxis against peritoneal recurrence after curative surgery and also as a palliative treatment in advanced peritoneal metastasis with intractable ascites. While prophylactic HIPEC has been shown to reduce peritoneal recurrence and improve survival in many randomised trials, palliative HIPEC can reduce the need for frequent paracentesis. Although CRS with HIPEC has shown promise in increasing the survival of selected patients with established PM from gastric cancer, larger studies are needed before this can be accepted as a standard of care. PMID:27065710

  7. Vaginal cancer

    MedlinePlus

    Vaginal cancer; Cancer - vagina; Tumor - vaginal ... Most vaginal cancers occur when another cancer, such as cervical or endometrial cancer , spreads. This is called secondary vaginal cancer. Cancer ...

  8. Gastric cancer - clinical and epidemiological aspects.

    PubMed

    Venerito, Marino; Link, Alexander; Rokkas, Theodoros; Malfertheiner, Peter

    2016-09-01

    Gastric cancer (GC) ranks fifth for cancer incidence and second for cancer deaths. Epidemiological data showed that survivors of Hodgkin's lymphoma and patients with pernicious anemia etiologically linked to autoimmune gastritis are at increased risk of GC. Screening of patients with autoimmune thyroid disease by means of pepsinogen (PG) I and PG I/II detected autoimmune gastritis with oxyntic gastric atrophy in one of four patients and may be recommended for GC prevention purposes. The International Agency for Research on Cancer reported a positive association between consumption of processed meet and increased GC risk. A new GC risk prediction model based on biological markers, age, gender, smoking status, family history of GC, and consumption of highly salted food showed good predictive performance, and might prompt individuals to modify their lifestyle habits, attend regular check-up visits or participate in screening programs. A novel GC classification based on gene expression of primary resected cancers correlated with clinicopathological features. Noncoding RNA for GC screening remains the focus of multiple studies. Patients with early GC undergoing endoscopic resection are more likely to develop metachronous lesions than patients undergoing surgery and endoscopic surveillance is warranted in this special cohort. The addition of gastrectomy to chemotherapy did not improve survival of patients with advanced GC and a single noncurable factor. Apatinib, a novel oral vascular endothelial growth factor receptor 2 tyrosine kinase inhibitor, improved the median overall survival of patients with advanced GC and progressive disease after two or more lines of prior chemotherapy of nearly 3 months. PMID:27531538

  9. A Simple Experimentally Based Model Using Proprioceptive Regulation of Motor Primitives Captures Adjusted Trajectory Formation in Spinal Frogs

    PubMed Central

    Kargo, William J.; Ramakrishnan, Arun; Hart, Corey B.; Rome, Lawrence C.

    2010-01-01

    Spinal circuits may organize trajectories using pattern generators and synergies. In frogs, prior work supports fixed-duration pulses of fixed composition synergies, forming primitives. In wiping behaviors, spinal frogs adjust their motor activity according to the starting limb position and generate fairly straight and accurate isochronous trajectories across the workspace. To test whether a compact description using primitives modulated by proprioceptive feedback could reproduce such trajectory formation, we built a biomechanical model based on physiological data. We recorded from hindlimb muscle spindles to evaluate possible proprioceptive input. As movement was initiated, early skeletofusimotor activity enhanced many muscle spindles firing rates. Before movement began, a rapid estimate of the limb position from simple combinations of spindle rates was possible. Three primitives were used in the model with muscle compositions based on those observed in frogs. Our simulations showed that simple gain and phase shifts of primitives based on published feedback mechanisms could generate accurate isochronous trajectories and motor patterns that matched those observed. Although on-line feedback effects were omitted from the model after movement onset, our primitive-based model reproduced the wiping behavior across a range of starting positions. Without modifications from proprioceptive feedback, the model behaviors missed the target in a manner similar to that in deafferented frogs. These data show how early proprioception might be used to make a simple estimate initial limb state and to implicitly plan a movement using observed spinal motor primitives. Simulations showed that choice of synergy composition played a role in this simplicity. To generate froglike trajectories, a hip flexor synergy without sartorius required motor patterns with more proprioceptive knee flexor control than did patterns built with a more natural synergy including sartorius. Such synergy

  10. A musculoskeletal model of human locomotion driven by a low dimensional set of impulsive excitation primitives.

    PubMed

    Sartori, Massimo; Gizzi, Leonardo; Lloyd, David G; Farina, Dario

    2013-01-01

    Human locomotion has been described as being generated by an impulsive (burst-like) excitation of groups of musculotendon units, with timing dependent on the biomechanical goal of the task. Despite this view being supported by many experimental observations on specific locomotion tasks, it is still unknown if the same impulsive controller (i.e., a low-dimensional set of time-delayed excitastion primitives) can be used as input drive for large musculoskeletal models across different human locomotion tasks. For this purpose, we extracted, with non-negative matrix factorization, five non-negative factors from a large sample of muscle electromyograms in two healthy subjects during four motor tasks. These included walking, running, sidestepping, and crossover cutting maneuvers. The extracted non-negative factors were then averaged and parameterized to obtain task-generic Gaussian-shaped impulsive excitation curves or primitives. These were used to drive a subject-specific musculoskeletal model of the human lower extremity. Results showed that the same set of five impulsive excitation primitives could be used to predict the dynamics of 34 musculotendon units and the resulting hip, knee and ankle joint moments (i.e., NRMSE = 0.18 ± 0.08, and R (2) = 0.73 ± 0.22 across all tasks and subjects) without substantial loss of accuracy with respect to using experimental electromyograms (i.e., NRMSE = 0.16 ± 0.07, and R (2) = 0.78 ± 0.18 across all tasks and subjects). Results support the hypothesis that biomechanically different motor tasks might share similar neuromuscular control strategies. This might have implications in neurorehabilitation technologies such as human-machine interfaces for the torque-driven, proportional control of powered prostheses and orthoses. In this, device control commands (i.e., predicted joint torque) could be derived without direct experimental data but relying on simple parameterized Gaussian-shaped curves, thus decreasing the input drive

  11. A musculoskeletal model of human locomotion driven by a low dimensional set of impulsive excitation primitives

    PubMed Central

    Sartori, Massimo; Gizzi, Leonardo; Lloyd, David G.; Farina, Dario

    2013-01-01

    Human locomotion has been described as being generated by an impulsive (burst-like) excitation of groups of musculotendon units, with timing dependent on the biomechanical goal of the task. Despite this view being supported by many experimental observations on specific locomotion tasks, it is still unknown if the same impulsive controller (i.e., a low-dimensional set of time-delayed excitastion primitives) can be used as input drive for large musculoskeletal models across different human locomotion tasks. For this purpose, we extracted, with non-negative matrix factorization, five non-negative factors from a large sample of muscle electromyograms in two healthy subjects during four motor tasks. These included walking, running, sidestepping, and crossover cutting maneuvers. The extracted non-negative factors were then averaged and parameterized to obtain task-generic Gaussian-shaped impulsive excitation curves or primitives. These were used to drive a subject-specific musculoskeletal model of the human lower extremity. Results showed that the same set of five impulsive excitation primitives could be used to predict the dynamics of 34 musculotendon units and the resulting hip, knee and ankle joint moments (i.e., NRMSE = 0.18 ± 0.08, and R2 = 0.73 ± 0.22 across all tasks and subjects) without substantial loss of accuracy with respect to using experimental electromyograms (i.e., NRMSE = 0.16 ± 0.07, and R2 = 0.78 ± 0.18 across all tasks and subjects). Results support the hypothesis that biomechanically different motor tasks might share similar neuromuscular control strategies. This might have implications in neurorehabilitation technologies such as human-machine interfaces for the torque-driven, proportional control of powered prostheses and orthoses. In this, device control commands (i.e., predicted joint torque) could be derived without direct experimental data but relying on simple parameterized Gaussian-shaped curves, thus decreasing the input drive complexity

  12. Pooled analysis of the surgical treatment for colorectal cancer liver metastases.

    PubMed

    Veereman, G; Robays, J; Verleye, L; Leroy, R; Rolfo, C; Van Cutsem, E; Bielen, D; Ceelen, W; Danse, E; De Man, M; Demetter, P; Flamen, P; Hendlisz, A; Sinapi, I; Vanbeckevoort, D; Ysebaert, D; Peeters, M

    2015-04-01

    Liver metastases in colorectal cancer patients decreases the expected 5 year survival rates by a factor close to nine. It is generally accepted that resection of liver metastases should be attempted whenever feasible. This manuscript addresses the optimal therapeutic plan regarding timing of resection of synchronous liver metastases and the use of chemotherapy in combination with resection of synchronous metachronous liver metastases. The aim is to pool all published results in order to attribute a level of evidence to outcomes and identify lacking evidence areas. A systematic search of guidelines, reviews, randomised controlled, observational studies and updating a meta-analysis was performed. Data were extracted and analysed. Data failed to demonstrate an effect of timing of surgery or use of chemotherapy on overall survival. Concomitant resection of liver metastases and the primary tumour may result in lower postoperative morbidity. Systemic peri-operative chemotherapy may improve progression free survival compared to surgery alone. PMID:25666309

  13. Photostability of glycine and nitrogen basis in cometary grains : application to the transport of organic matter within the primitive Earth

    NASA Astrophysics Data System (ADS)

    Saiagh, K.; Belilla, J.; Fray, N.; Valorso, R.; Cottin, H.

    2015-10-01

    The study of photochemistry in the solar system is of prime importance to assess complex organic chemistry in any extraterrestrial environment. Among those environments, comets and grains ejected from their nuclei are of particular interest in the context of astrobiology as they could have brought organic matter on the primitive Earth, and hence contribute to the emergence of life. Furthermore, they can provide precious information on the physico-chemical parameters prevailing in the primitive solar nebula during its formation. In this context, we are studying the extent to which organic matter within grains may survive to solar radiation and the fraction of these organic molecules destroyed when it is subjected to sunlight.

  14. Impact of peritoneal carcinomatosis in the disease history of colorectal cancer management: a longitudinal experience of 2406 patients over two decades

    PubMed Central

    Kerscher, A G; Chua, T C; Gasser, M; Maeder, U; Kunzmann, V; Isbert, C; Germer, C T; Pelz, J O W

    2013-01-01

    Background: Recent therapeutic developments demand for an update of information on natural history, risk factors and prognosis of peritoneal carcinomatosis (PC) of colorectal origin. Therefore, prospective registry data should provide information about incidence, predictors and outcome. Methods: From a prospectively expanded single-institutional database with 2406 consecutive patients with colorectal cancer (CRC), clinical, histological and survival data were analysed for independent risk factors and prognosis. Findings were then stratified to the era of treatment without chemotherapy, 5-Fluorouracil-only and contemporary systemic chemotherapy, respectively. Results: Overall, 256 (10.6%) patients were diagnosed with PC thereof 141 (5.85%) with metachronous PC. Independent risk factors for the development of metachronous PC were age <62 years, N2-status, T4-status, location of the primary in the left colon or appendix. In the era of contemporary systemic chemotherapy, prognosis for PC improved only not-significantly (median survival of 17.9 months vs 7.03 months, P=0.054). Conclusion: Despite improvement in the overall outcome with prolonged median survival for the complete patient cohort with CRC, those patients with PC have not experienced the same benefit. In the era of contemporary systemic chemotherapy, progress in treatment resulted in only limited survival benefit. Thus, continuous efforts for further therapeutic advancements should be undertaken in these patients diagnosed with PC. PMID:23511564

  15. Isotopic Fractionation in Primitive Material: Quantifying the Contribution of Interstellar Chemistry

    NASA Technical Reports Server (NTRS)

    Charnley, Steven

    2010-01-01

    Anomalously fractionated isotopic material is found in many primitive Solar System objects, such as meteorites and comets. It is thought, in some cases, to trace interstellar matter that was incorporated into the Solar Nebula without undergoing significant processing. We will present the results of models of the nitrogen, oxygen, and carbon fractionation chemistry in dense molecular clouds, particularly in cores where substantial freeze-out of molecules on to dust has occurred. The range of fractionation ratios expected in different interstellar molecules will be discussed and compared to the ratios measured in molecular clouds, comets and meteoritic material. These models make several predictions that can be tested in the near future by molecular line observations, particularly with ALMA.

  16. A numerical investigation of the finite element method in compressible primitive variable Navier-Stokes flow

    NASA Technical Reports Server (NTRS)

    Cook, C. H.

    1977-01-01

    The results of a comprehensive numerical investigation of the basic capabilities of the finite element method (FEM) for numerical solution of compressible flow problems governed by the two-dimensional and axis-symmetric Navier-Stokes equations in primitive variables are presented. The strong and weak points of the method as a tool for computational fluid dynamics are considered. The relation of the linear element finite element method to finite difference methods (FDM) is explored. The calculation of free shear layer and separated flows over aircraft boattail afterbodies with plume simulators indicate the strongest assets of the method are its capabilities for reliable and accurate calculation employing variable grids which readily approximate complex geometry and capably adapt to the presence of diverse regions of large solution gradients without the necessity of domain transformation.

  17. Fossilization causes organisms to appear erroneously primitive by distorting evolutionary trees

    PubMed Central

    Sansom, Robert S.; Wills, Matthew A.

    2013-01-01

    Fossils are vital for calibrating rates of molecular and morphological change through geological time, and are the only direct source of data documenting macroevolutionary transitions. Many evolutionary studies therefore require the robust phylogenetic placement of extinct organisms. Here, we demonstrate that the inevitable bias of the fossil record to preserve just hard, skeletal morphology systemically distorts phylogeny. Removal of soft part characters from 78 modern vertebrate and invertebrate morphological datasets resulted in significant changes to phylogenetic signal; it caused individual taxa to drift from their original position, predominately downward toward the root of their respective trees. This last bias could systematically inflate evolutionary rates inferred from molecular data because first fossil occurrences will not be recognised as such. Stem-ward slippage, whereby fundamental taphonomic biases cause fossils to be interpreted as erroneously primitive, is therefore a ubiquitous problem for all biologists attempting to infer macroevolutionary rates or sequences. PMID:23985991

  18. A model for the origin of stable protocells in a primitive alkaline ocean.

    PubMed

    Snyder, W D; Fox, S W

    1975-10-01

    When a mixture of the eighteen proteinous amino acids are suitably heated in the dry state with seawater salts, a copolyamino acid results. One fraction of this polymer is found, through isoelectric focusing, to consist of a mixture of acidic and basic proteinoids, each of sharply limited heterogeneity. When one fraction of the seawater proteinoid is dissolved in hot water, and the solution is cooled, proteinoid microspheres result. These have properties in common with simpler types, but also stable at pH values to 9, in common with microspheres prepared by mixing acidic and basic proteinoids. These processes thus constitute a simple model for the origin of a protocell stable in a primitive alkaline ocean. PMID:1120

  19. Low-temperature condensates in comets. [using primitive solar nebula model

    NASA Technical Reports Server (NTRS)

    Delsemme, A. H.; Rud, D.

    1977-01-01

    Recent observational data on the volatile fraction of comets are confronted with a model based on the fractional condensation, in the 80-100 K range, of a higher-temperature equilibrium obtained from a solar mixture, more or less depleted in oxygen and in hydrogen. It is possible to almost duplicate the observational data, only by assuming that the solar ratio of C/O is at least as large as 0.66 and that the hydrogen was drastically depleted by an unknown process in the primitive solar nebula. Although none of these two assumptions is at variance with present knowledge, the latter is sufficiently exotic to propose a simpler explanation, namely that comets could be made of interstellar grains relatively unprocessed by heat.

  20. Simulations of the 2.5D inviscid primitive equations in a limited domain

    NASA Astrophysics Data System (ADS)

    Chen, Qingshan; Temam, Roger; Tribbia, Joseph J.

    2008-12-01

    The primitive equations (PEs) of the atmosphere and the oceans without viscosity are considered. These equations are not well-posed for any set of local boundary conditions. In space dimension 2.5 a set of nonlocal boundary conditions has been proposed in Chen et al. [Q. Chen, J. Laminie, A. Rousseau, R. Temam, J. Tribbia, A 2.5D Model for the equations of the ocean and the atmosphere, Anal. Appl. 5(3) (2007) 199-229]. The present article is aimed at testing the validity of these boundary conditions with physically relevant data. The issues tested are the well-posedness in the nonlinear case and the computational efficiency of the boundary conditions for limited area models [T.T. Warner, R.A. Peterson, R.E. Treadon, A tutorial on lateral boundary conditions as a basic and potentially serious limitation to regional numerical weather prediction, Bull. Amer. Meteor. Soc. 78(11) (1997) 2599-2617].

  1. [Diversity and viability of prokaryotes in primitive soils of the larsemann oasis (East Antarctica)].

    PubMed

    Kudinova, A G; Lysak, L V; Lapygina, E V; Soina, V S; Mergelov, N S

    2015-01-01

    The diversity and viability of prokaryotic communities in the primitive organomineral soils of East Antarctica have been studied; it has been shown that the total number of bacteria is smaller than and the viability of bacteria is similar to that in soils of the temperate zone. The prokaryotic communities are characterized by the occurrence of a major part of cells in filterable forms, which is higher than the analogous parameter for the temperate soils. The method of fluorescence in situ hybridization (FISH) revealed that the distribution of the main taxons is similar to that in the temperate soils: the portion of the domain Archaea is smaller than that of the domain Bacteria; the total content of Gram-negative bacteria (the phyla Proteobacteria, Acidobacteria, and Planctomycetes) is higher than that of Gram-positive bacteria (Actinobacteria). Within the phylum Proteobacteria, a significant variation of three proteobacterial classes has been noted along the profiles of the soils studied. PMID:26021154

  2. Ruptured cerebral aneurysm associated with a persistent primitive trigeminal artery variant

    PubMed Central

    Yamamoto, Takahiro; Hasegawa, Yu; Ohmori, Yuki; Kawano, Takayuki; Kai, Yutaka; Morioka, Motohiro; Kuratsu, Jun-ichi

    2011-01-01

    Background: Primitive trigeminal artery variants (PTAVs) are one of the rare persistent fetal anastomoses between the carotid and vertebrobasilar circulations. They originate from the internal carotid artery and join one of the cerebellar arteries instead of the basilar artery. Case Description: We present an 82-year-old woman with subarachnoid hemorrhage due to a ruptured aneurysm originating at a PTAV. Three-dimensional computed tomography angiogram and cerebral angiography revealed bilateral PTAV and two aneurysms originating at the left PTAV. The proximal and distal aneurysms were saccular and fusiform, respectively. She underwent surgical treatment and her postoperative course was uneventful. Conclusion: Our case demonstrates that extremely rare cerebral aneurysms associated with PTAV can be addressed successfully by surgical intervention. PMID:22059121

  3. Thrombectomy in posterior circulation stroke through persistent primitive trigeminal artery: A case report.

    PubMed

    Mulder, Mjhl; Lycklama À Nijeholt, G J; Dinkelaar, W; de Rooij, Tpw; van Es, Acgm; van der Kallen, B F; Emmer, B J

    2015-12-01

    We describe a case of intra-arterial treatment (IAT) of acute posterior circulation occlusion in a patient with a persistent primitive trigeminal artery (PPTA). The patient presented with an acute left sided hemiparesis and loss of consciousness (Glasgow coma score of 5). Computed tomography angiography showed an acute occlusion of the right internal carotid artery (ICA), the PPTA, distal basilar artery (BA), right posterior cerebral artery (PCA), and right superior cerebellar artery (SCA). Stent-retriever assisted thrombectomy was not considered possible through the hypoplastic proximal BA. After passage of the proximal ICA occlusion, the right PCA and SCA were recanalized through the PPTA, with a single thrombectomy procedure. Ten days after intervention patient was discharged scoring optimal EMV with only a mild facial and left hand paresis remaining. PPTA is a persistent embryological carotid-basilar connection. Knowledge of existing (embryonic) variants in neurovascular anatomy is essential when planning and performing acute neurointerventional procedures. PMID:26464287

  4. A reconfigurable continuous-flow fluidic routing fabric using a modular, scalable primitive.

    PubMed

    Silva, Ryan; Bhatia, Swapnil; Densmore, Douglas

    2016-07-01

    Microfluidic devices, by definition, are required to move liquids from one physical location to another. Given a finite and frequently fixed set of physical channels to route fluids, a primitive design element that allows reconfigurable routing of that fluid from any of n input ports to any n output ports will dramatically change the paradigms by which these chips are designed and applied. Furthermore, if these elements are "regular" regarding their design, the programming and fabrication of these elements becomes scalable. This paper presents such a design element called a transposer. We illustrate the design, fabrication and operation of a single transposer. We then scale this design to create a programmable fabric towards a general-purpose, reconfigurable microfluidic platform analogous to the Field Programmable Gate Array (FPGA) found in digital electronics. PMID:27345339

  5. Ion Irradiation Experiments on the Murchison CM2 Carbonaceous Chondrite: Simulating Space Weathering of Primitive Asteroids

    NASA Technical Reports Server (NTRS)

    Keller, L. P.; Christoffersen, R.; Dukes, C. A.; Baragiola, R. A.; Rahman, Z.

    2015-01-01

    Remote sensing observations show that space weathering processes affect all airless bodies in the Solar System to some degree. Sample analyses and lab experiments provide insights into the chemical, spectroscopic and mineralogic effects of space weathering and aid in the interpretation of remote- sensing data. For example, analyses of particles returned from the S-type asteroid Itokawa by the Hayabusa mission revealed that space-weathering on that body was dominated by interactions with the solar wind acting on LL ordinary chondrite-like materials [1, 2]. Understanding and predicting how the surface regoliths of primitive carbonaceous asteroids respond to space weathering processes is important for future sample return missions (Hayabusa 2 and OSIRIS-REx) that are targeting objects of this type. Here, we report the results of our preliminary ion irradiation experiments on a hydrated carbonaceous chondrite with emphasis on microstructural and infrared spectral changes.

  6. Identification of genes for sulfolipid synthesis in primitive red alga Cyanidioschyzon merolae.

    PubMed

    Sato, Norihiro; Kobayashi, Satomi; Aoki, Motohide; Umemura, Tomonari; Kobayashi, Isao; Tsuzuki, Mikio

    2016-01-29

    Sulfoquinovosyl diacylglycerol is one of the lipids that construct thylakoid membranes, and is distributed from cyanobacteria to plastids in plants including a red lineage. One of the most primitive red algae, Cyanidioschyzon melorae, similar to cyanobacteria and green plants, possesses homologs of the SQD1 and SQD2 genes that code for UDP-sulfoquinovose and sulfoquinovosyl diacylglycerol synthases, respectively, for the synthesis of sulfoquinovosyl diacylglycerol. We here revealed the structural properties of SQD1 and SQD2 homologs in C. melorae intrinsic to those of the authentic proteins, and verified their enzymatic functions through heterologous expression in cyanobacterial disruptants as to the corresponding genes. The results demonstrated that the system of sulfoquinovosyl diacylglycerol synthesis could have been conserved through evolution of cyanobacteria to plastids in a red lineage, which is compatible with the monophyletic origin of plastids. PMID:26768360

  7. Chromosome conservation among the advanced pecorans and determination of the primitive bovid karyotype.

    PubMed

    Gallagher, D S; Derr, J N; Womack, J E

    1994-01-01

    Extensive monobrachial QFH-band homologies were found among cattle (Bovidae), pronghorn (Antilocapridae), Masai giraffe (Giraffidae), and mule and whitetail deer (Cervidae). The deer species had identical karyotypes (2n = 70, NAA = 70). Interfamily comparisons demonstrated that cattle (2n = 60, NAA = 58) and pronghorn (2n = 58, NAA = 60) were karyotypically the most similar. The giraffe possessed a 2n = 30, NAA = 54, and differed from the other artiodactyls by having a preponderance of biarmed autosomes. The primarily acrocentric deer karyotypes showed several chromosome arm disruptions relative to the other species. Comparative cytogenetic data among the advanced pecorans strongly suggest that the 2n = 60, NAA = 58 karyotype found in several species of the tribe Bovini is probably near the primitive condition for the Bovidae. However, the ancestral conditions of the sex chromosomes within the Bovidae and among the advanced pecorans remain in question. PMID:8014460

  8. Origin of organic compounds on the primitive earth and in meteorites

    NASA Technical Reports Server (NTRS)

    Miller, S. L.; Urey, H. C.; Oro, J.

    1976-01-01

    The paper examines the role and relative contributions of different forms of energy to the synthesis of amino acids and other organic compounds on the primitive earth and in the solar nebula. Attention is directed mainly to the activation steps and formation of reactive intermediate compounds. Electric discharges appear to be not only the most efficient energy for amino acid synthesis but also yield a mixture of amino acids that is qualitatively and quantitatively the same as that found in the Murchison carbonaceous chondrite. Ultraviolet light is likely to have played a major role in prebiotic synthesis. The reaction of CO plus H2 plus NH3 on the surface of a Fischer-Tropsch catalyst produces reactive intermediates which lead to amino acids and other organic compounds in a much less efficient way than electric discharges.

  9. Primitive atmosphere and implications for the formation of channels on Mars

    NASA Technical Reports Server (NTRS)

    Yung, Y. L.; Pinto, J. P.

    1978-01-01

    It is suggested that, if primitive Mars had a reducing atmosphere composed mainly of methane, this atmosphere could be polymerized by solar ultraviolet radiation to produce higher hydrocarbons. These compounds, which would be low-viscosity liquids at present temperatures on Mars, could have contributed to the formation of channels. The Martian atmosphere model used in the analysis is similar to Sagan's (1977), except that ammonia is omitted. Major reactions in this early Martian atmosphere are examined, and the number densities of the lighter alkanes in the lower atmosphere of Mars are determined. Since the photochemical mechanism investigated here would provide only a modest amount of fluid for a comparatively brief period of time (10-100 million years), liquid alkanes would not be the major factor in the formation of the channels, although their derivatives could contribute to the greenhouse effect or depress the freezing point of water.

  10. A recursive vesicle-based model protocell with a primitive model cell cycle

    PubMed Central

    Kurihara, Kensuke; Okura, Yusaku; Matsuo, Muneyuki; Toyota, Taro; Suzuki, Kentaro; Sugawara, Tadashi

    2015-01-01

    Self-organized lipid structures (protocells) have been proposed as an intermediate between nonliving material and cellular life. Synthetic production of model protocells can demonstrate the potential processes by which living cells first arose. While we have previously described a giant vesicle (GV)-based model protocell in which amplification of DNA was linked to self-reproduction, the ability of a protocell to recursively self-proliferate for multiple generations has not been demonstrated. Here we show that newborn daughter GVs can be restored to the status of their parental GVs by pH-induced vesicular fusion of daughter GVs with conveyer GVs filled with depleted substrates. We describe a primitive model cell cycle comprising four discrete phases (ingestion, replication, maturity and division), each of which is selectively activated by a specific external stimulus. The production of recursive self-proliferating model protocells represents a step towards eventual production of model protocells that are able to mimic evolution. PMID:26418735

  11. SUPERNOVA NEUTRINO NUCLEOSYNTHESIS OF THE RADIOACTIVE {sup 92}Nb OBSERVED IN PRIMITIVE METEORITES

    SciTech Connect

    Hayakawa, T.; Chiba, S.; Iwamoto, N.; Nakamura, K.; Kajino, T.; Cheoun, M. K.; Mathews, G. J.

    2013-12-10

    The isotope {sup 92}Nb decays to {sup 92}Zr with a half-life of 3.47 × 10{sup 7} yr. Although this isotope does not exist in the current solar system, initial abundance ratios for {sup 92}Nb/{sup 93}Nb at the time of solar system formation have been measured in primitive meteorites. The astrophysical origin of this material, however, has remained unknown. In this Letter, we present new calculations which demonstrate a novel origin for {sup 92}Nb via neutrino-induced reactions in core-collapse supernovae (ν-process). Our calculated result shows that the observed ratio of {sup 92}Nb/{sup 93}Nb ∼ 10{sup –5} can be explained by the ν-process.

  12. Supernova Neutrino Nucleosynthesis of the Radioactive 92Nb Observed in Primitive Meteorites

    NASA Astrophysics Data System (ADS)

    Hayakawa, T.; Nakamura, K.; Kajino, T.; Chiba, S.; Iwamoto, N.; Cheoun, M. K.; Mathews, G. J.

    2013-12-01

    The isotope 92Nb decays to 92Zr with a half-life of 3.47 × 107 yr. Although this isotope does not exist in the current solar system, initial abundance ratios for 92Nb/93Nb at the time of solar system formation have been measured in primitive meteorites. The astrophysical origin of this material, however, has remained unknown. In this Letter, we present new calculations which demonstrate a novel origin for 92Nb via neutrino-induced reactions in core-collapse supernovae (ν-process). Our calculated result shows that the observed ratio of 92Nb/93Nb ~ 10-5 can be explained by the ν-process.

  13. Investigation of Nebular Processes Through Oxygen Isotopic Analysis of Primitive Meteorite Materials

    NASA Technical Reports Server (NTRS)

    Leshin, Laurie

    2002-01-01

    As a direct result of support provided by this grant, precise and accurate determination of delta(18)O and delta(17)O in silicates (and other minerals) by ion microprobe (both IMS 6f and IMS 1270) are now being carried out in several laboratories, and these analyses, combined with application of laser fluorination techniques, have led to a proliferation of oxygen isotopic data in the past approx. 3 years. The applications of these techniques in cosmochemical research have been myriad, from understanding the most refractory objects in the nebula (CAIs) to the low temperature alteration processes on meteorite parent bodies. Here, we describe our progress in understanding the oxygen isotopic microdistributions in primitive meteorite materials, as directly supported by this Origins grant.

  14. Myosin II-mediated cell shape changes and cell intercalation contribute to primitive streak formation

    PubMed Central

    Song, Feifei; Sang, Helen M.; Martin, René; Knölker, Hans-Joachim; MacDonald, Michael P; Weijer, Cornelis J

    2016-01-01

    Primitive streak formation in the chick embryo involves large scale highly coordinated flows of over 100.000 cells in the epiblast. These large scale tissue flows and deformations can be correlated with specific anisotropic cell behaviours in the forming mesendoderm through a combined light-sheet microscopy and computational analysis. Relevant behaviours include apical contraction, elongation along the apical-basal axis followed by ingression as well as asynchronous directional cell intercalation of small groups of mesendoderm cells. Cell intercalation is associated with sequential, directional contraction of apical junctions, the onset, localisation and direction of which correlate strongly with the appearance of active Myosin II cables in aligned apical junctions in neighbouring cells. Use of a class specific Myosin inhibitors and gene specific knockdowns show that apical contraction and intercalation are Myosin II dependent and also reveal critical roles for Myosin I and Myosin V family members in the assembly of junctional Myosin II cables. PMID:25812521

  15. A recursive vesicle-based model protocell with a primitive model cell cycle.

    PubMed

    Kurihara, Kensuke; Okura, Yusaku; Matsuo, Muneyuki; Toyota, Taro; Suzuki, Kentaro; Sugawara, Tadashi

    2015-01-01

    Self-organized lipid structures (protocells) have been proposed as an intermediate between nonliving material and cellular life. Synthetic production of model protocells can demonstrate the potential processes by which living cells first arose. While we have previously described a giant vesicle (GV)-based model protocell in which amplification of DNA was linked to self-reproduction, the ability of a protocell to recursively self-proliferate for multiple generations has not been demonstrated. Here we show that newborn daughter GVs can be restored to the status of their parental GVs by pH-induced vesicular fusion of daughter GVs with conveyer GVs filled with depleted substrates. We describe a primitive model cell cycle comprising four discrete phases (ingestion, replication, maturity and division), each of which is selectively activated by a specific external stimulus. The production of recursive self-proliferating model protocells represents a step towards eventual production of model protocells that are able to mimic evolution. PMID:26418735

  16. A recursive vesicle-based model protocell with a primitive model cell cycle

    NASA Astrophysics Data System (ADS)

    Kurihara, Kensuke; Okura, Yusaku; Matsuo, Muneyuki; Toyota, Taro; Suzuki, Kentaro; Sugawara, Tadashi

    2015-09-01

    Self-organized lipid structures (protocells) have been proposed as an intermediate between nonliving material and cellular life. Synthetic production of model protocells can demonstrate the potential processes by which living cells first arose. While we have previously described a giant vesicle (GV)-based model protocell in which amplification of DNA was linked to self-reproduction, the ability of a protocell to recursively self-proliferate for multiple generations has not been demonstrated. Here we show that newborn daughter GVs can be restored to the status of their parental GVs by pH-induced vesicular fusion of daughter GVs with conveyer GVs filled with depleted substrates. We describe a primitive model cell cycle comprising four discrete phases (ingestion, replication, maturity and division), each of which is selectively activated by a specific external stimulus. The production of recursive self-proliferating model protocells represents a step towards eventual production of model protocells that are able to mimic evolution.

  17. Delineation of six species of the primitive algal genus Glaucocystis based on in situ ultrastructural characteristics.

    PubMed

    Takahashi, Toshiyuki; Nishida, Tomoki; Tuji, Akihiro; Saito, Chieko; Matsuzaki, Ryo; Sato, Mayuko; Toyooka, Kiminori; Yasuda, Hidehiro; Nozaki, Hisayoshi

    2016-01-01

    The field of microbiology was established in the 17(th) century upon the discovery of microorganisms by Antonie van Leeuwenhoek using a single-lens microscope. Now, the detailed ultrastructures of microorganisms can be elucidated in situ using three-dimensional electron microscopy. Since the availability of electron microscopy, the taxonomy of microscopic organisms has entered a new era. Here, we established a new taxonomic system of the primitive algal genus Glaucocystis (Glaucophyta) using a new-generation electron microscopic methodology: ultra-high-voltage electron microscopy (UHVEM) and field-emission scanning electron microscopy (FE-SEM). Various globally distributed Glaucocystis strains were delineated into six species, based on differences in in situ ultrastructural features of the protoplast periphery under UHVEM tomography and in the mother cell wall by FE-SEM, as well as differences in the light microscopic characteristics and molecular phylogenetic results. The present work on Glaucocystis provides a model case of new-generation taxonomy. PMID:27383831

  18. Volatile trace elements and the characterization of the Cayley Formation and the primitive lunar crust

    NASA Technical Reports Server (NTRS)

    Jovanovic, S.; Reed, G. W., Jr.

    1973-01-01

    Two types of highland terrain appear to be present at the Apollo 16 landing site. The Plains Formation called Cayley is ubiquitous and blankets even those regions that were presumably a part of the mountainous Descartes Formation. The second type of terrain is that associated with the ejectae from North and South Ray craters. The stratigraphy sampled by the ejectae underlays the Cayley layer as characterized above and may permit a redefinition of Descartes Formation as that which underlays the smooth Plains deposits. These conclusions are based on the concentrations and chemical coherence between elements such as Cl-F-P2O5 and Ru-Os. The primitive lunar crust may be characterized by the type of feldspathic rocks which are enriched in trace elements, such as Cl, Br, U, Te, Ru, and Os, as found in 'rusty' rock 66095 and in 61016; other feldspathic rocks are depleted and may be of secondary origin.

  19. GATA6 levels modulate primitive endoderm cell fate choice and timing in the mouse blastocyst.

    PubMed

    Schrode, Nadine; Saiz, Néstor; Di Talia, Stefano; Hadjantonakis, Anna-Katerina

    2014-05-27

    Cells of the inner cell mass (ICM) of the mouse blastocyst differentiate into the pluripotent epiblast or the primitive endoderm (PrE), marked by the transcription factors NANOG and GATA6, respectively. To investigate the mechanistic regulation of this process, we applied an unbiased, quantitative, single-cell-resolution image analysis pipeline to analyze embryos lacking or exhibiting reduced levels of GATA6. We find that Gata6 mutants exhibit a complete absence of PrE and demonstrate that GATA6 levels regulate the timing and speed of lineage commitment within the ICM. Furthermore, we show that GATA6 is necessary for PrE specification by FGF signaling and propose a model where interactions between NANOG, GATA6, and the FGF/ERK pathway determine ICM cell fate. This study provides a framework for quantitative analyses of mammalian embryos and establishes GATA6 as a nodal point in the gene regulatory network driving ICM lineage specification. PMID:24835466

  20. Association sarcoïdose et cirrhose biliaire primitive: à propos d'un nouveau cas

    PubMed Central

    Aqodad, Nourdin; Loukili, Bouchra; Gallouj, Salim; Harmouch, Taoufik; Amarti, Afaf; Mernissi, FZ; Ibrahimi, Adil

    2014-01-01

    La sarcoïdose est une maladie systémique d’étiologie inconnue. Elle est caractérisée par la présence de lésions granulomateuses, non caséeuses, au niveau des organes atteints. La cirrhose biliaire primitive (CBP) est une hépatopathie cholestatique auto-immune chronique, caractérisée par une destruction des canalicules biliaires et la présence d'anticorps antimitchondries type M2. L'association sarcoïdose et CBP est rare. Nous rapportons un nouveau cas de cette association avec revue de la littérature. PMID:25489373

  1. The interaction between giant gaseous protoplanets and the primitive solar nebula

    NASA Technical Reports Server (NTRS)

    Cameron, A. G. W.

    1979-01-01

    The manner in which a giant gaseous protoplanet becomes embedded in the primitive solar nebula determines surface boundary conditions which must be used in studying the evolution of such objects. On the one hand, if the system resembles a contact binary system, then the envelope of the protoplanet should approach the entropy of the surrounding nebula. On the other hand angular momentum transfer by resonance and tidal effects between the nebula and the protoplanet may cause the nebula to exhibit a zone of avoidance near the protoplanet, thus inhibiting exchange of material. This problem has been studied with a computer program developed by D. N. C. Lin which simulates disk hydrodynamics by particle motions with dissipation. These studies suggest that for expected values of the protoplanet/protosun mass ratios, significant inhibition of mass exchange is likely, so that it is a reasonable next step to undertake protoplanet evolution studies with the imposition of minimum protoplanet surface temperatures.

  2. Coordinates Analyses of Hydrated Interplanetary Dust Particles: Samples of Primitive Solar System Bodies

    NASA Technical Reports Server (NTRS)

    Keller, L. P.; Snead, C.; McKeegan, K. D.

    2016-01-01

    Interplanetary dust particles (IDPs) collected in the stratosphere fall into two major groups: an anhydrous group termed the "chondritic-porous (CP) IDPs and a hydrated group, the "chondritic-smooth (CS) IDPs, although rare IDPs with mineralogies intermediate between these two groups are known [1]. The CP-IDPs are widely believed to be derived from cometary sources [e.g. 2]. The hydrated CS-IDPs show mineralogical similarities to heavily aqueously altered carbonaceous chondrites (e.g. CI chondrites), but only a few have been directly linked to carbonaceous meteorite parent bodies [e.g. 3, 4]. Most CS-IDPs show distinct chemical [5] and oxygen isotopic composition differences [6-8] from primitive carbonaceous chondrites. Here, we report on our coordinated analyses of a suite of carbon-rich CS-IDPs focusing on their bulk compositions, mineralogy, mineral chemistry, and isotopic compositions.

  3. Oxygen isotope variation in primitive achondrites: The influence of primordial, asteroidal and terrestrial processes

    NASA Astrophysics Data System (ADS)

    Greenwood, R. C.; Franchi, I. A.; Gibson, J. M.; Benedix, G. K.

    2012-10-01

    A detailed oxygen isotope study of the acapulcoites, lodranites, winonaites, brachinites and various related achondrites has been undertaken to investigate the nature of their precursor materials. High levels of terrestrial alteration displayed by many of these samples have been mitigated by leaching in ethanolamine thioglycollate (EATG) solution. Due to their high metal and sulphide content, acapulcoite, lodranite and winonaite samples show much greater isotopic shifts during weathering than brachinites. As observed in previous studies, Antarctic weathered finds are displaced to lighter oxygen isotope compositions and non-Antarctic finds to heavier values. Leached primitive achondrite residues continue to show high levels of oxygen isotope heterogeneity. This variation is reflected in the 2σ error on group mean Δ17O values, which decrease in the following order: acapulcoite-lodranite clan > brachinites > winonaites. On an oxygen three-isotope diagram, the acapulcoite--lodranite clan define a limited trend with a slope of 0.61 ± 0.08 and an intercept of -1.43 ± 0.27 (R2 = 0.78). A broad positive correlation between Δ17O and olivine fayalite contents displayed by both acapulcoite and lodranite samples may be the result of early aqueous alteration and subsequent dehydration. Winonaites experienced a greater degree of differentiation than the acapulcoite-lodranite clan and define a distinct mass fractionation line, with a slope of 0.53 ± 0.01 and an intercept of -0.53 ± 0.04 (R2 = 1). A number of samples currently classified as acapulcoites (NWA 725, NWA 1052 and Dho 1222) have oxygen isotope compositions indicating that they are winonaites. The relatively high level of oxygen isotope heterogeneity displayed by the brachinites supports their designation as primitive achondrites. A number of ungrouped olivine-rich achondrites (Divnoe, NWA 4042, NWA 4363, NWA 4518, NWA 5400, Zag (b)) as well as the unique plagioclase-rich achondrites GRA 06128 and GRA 06129 have

  4. Abundant ammonia in primitive asteroids and the case for a possible exobiology

    PubMed Central

    Pizzarello, Sandra; Williams, Lynda B.; Lehman, Jennifer; Holland, Gregory P.; Yarger, Jeffery L.

    2011-01-01

    Carbonaceous chondrites are asteroidal meteorites that contain abundant organic materials. Given that meteorites and comets have reached the Earth since it formed, it has been proposed that the exogenous influx from these bodies provided the organic inventories necessary for the emergence of life. The carbonaceous meteorites of the Renazzo-type family (CR) have recently revealed a composition that is particularly enriched in small soluble organic molecules, such as the amino acids glycine and alanine, which could support this possibility. We have now analyzed the insoluble and the largest organic component of the CR2 Grave Nunataks (GRA) 95229 meteorite and found it to be of more primitive composition than in other meteorites and to release abundant free ammonia upon hydrothermal treatment. The findings appear to trace CR2 meteorites’ origin to cosmochemical regimes where ammonia was pervasive, and we speculate that their delivery to the early Earth could have fostered prebiotic molecular evolution. PMID:21368183

  5. Primitive mental states and the body: a personal view of Armando B. Ferrari's concrete original object.

    PubMed

    Lombardi, Riccardo

    2002-04-01

    The author explores some psychoanalytic hypotheses about primitive mental states and their implications for a direct focus on body experience in clinical work. Some aspects of current clinical research about the patient's difficulty in achieving awareness of his emotional life as it emerges from object relations are presented, and this problem is viewed in connection with the relation of the analysand to his own body and to his capacity to pass through the different levels of mental elaboration, from motor discharge to abstraction. Ferrari's theories on the body-mind relationship are discussed and compared with the work of other authors. Ferrari calls the body the Concrete Original Object to indicate that it is the first source, differing from person to person, from which mental phenomena are generated and against which they are constantly measured. A clinical case serves as an illustration of the importance of the perception of the body for the birth of genuine, non-imitative mental activity. PMID:12040702

  6. PRIMITIVE MENTAL STATES AND THE BODY: A PERSONAL VIEW OF ARMANDO B. FERRARI'S CONCRETE ORIGINAL OBJECT.

    PubMed

    Lombardi, Riccardo

    2002-04-01

    The author explores some psychoanalytic hypotheses about primitive mental states and their implications for a direct focus on body experience in clinical work. Some aspects of current clinical research about the patient's difficulty in achieving awareness of his emotional life as it emerges from object relations are presented, and this problem is viewed in connection with the relation of the analysand to his own body and to his capacity to pass through the different levels of mental elaboration, from motor discharge to abstraction. Ferrari's theories on the body-mind relationship are discussed and compared with the work of other authors. Ferrari calls the body the Concrete Original Object to indicate that it is the first source, differing from person to person, from which mental phenomena are generated and against which they are constantly measured. A clinical case serves as an illustration of the importance of the perception of the body for the birth of genuine, non-imitative mental activity. PMID:12028697

  7. A reusable ontology for primitive and complex HL7 FHIR data types.

    PubMed

    Beredimas, Nikolaos; Kilintzis, Vassilis; Chouvarda, Ioanna; Maglaveras, Nicos

    2015-08-01

    HL7(®) FHIR(®) standard is a new standard aiming to offer more flexible interoperability mechanisms. We present a stand-alone RDF vocabulary as an OWL ontology that defines the primitive and complex data types of the FHIR framework, alongside their validation rules. We address the non-trivial questions of representing FHIR data types as RDF/OWL constructs in a coherent and complete manner. The proposed ontology can be used as a basic framework, where the complexity of a FHIR-based EHR is not required, while still maintaining semantic cohesion with an industry-based standard. It can also be the base for a complete representation of FHIR model as an ontology. PMID:26736811

  8. Rates of fixation by lightning of carbon and nitrogen in possible primitive atmospheres.

    PubMed

    Chameides, W L; Walker, J C

    1981-12-01

    A thermochemical-hydrodynamic model of the production of trace species by electrical discharges has been used to estimate the rates of fixation of C and N by lightning in the primitive atmosphere. Calculations for various possible mixtures of CH4, CO2, CO, N2, H2, and H2O reveal that the prime species produced were probably HCN and NO and that the key parameter determining the rates of fixation was the ratio of C atoms to O atoms in the atmosphere. Atmospheres with C more abundant than O have large HCN fixation rates, in excess of 10(17) molecules J-1, but small NO yields. However, when O is more abundant than C, the NO fixation rate approaches 10(17) molecules J-1 while the HCN yield is small. The implications for the evolution of life are discussed. PMID:6276836

  9. Delineation of six species of the primitive algal genus Glaucocystis based on in situ ultrastructural characteristics

    PubMed Central

    Takahashi, Toshiyuki; Nishida, Tomoki; Tuji, Akihiro; Saito, Chieko; Matsuzaki, Ryo; Sato, Mayuko; Toyooka, Kiminori; Yasuda, Hidehiro; Nozaki, Hisayoshi

    2016-01-01

    The field of microbiology was established in the 17th century upon the discovery of microorganisms by Antonie van Leeuwenhoek using a single-lens microscope. Now, the detailed ultrastructures of microorganisms can be elucidated in situ using three-dimensional electron microscopy. Since the availability of electron microscopy, the taxonomy of microscopic organisms has entered a new era. Here, we established a new taxonomic system of the primitive algal genus Glaucocystis (Glaucophyta) using a new-generation electron microscopic methodology: ultra-high-voltage electron microscopy (UHVEM) and field-emission scanning electron microscopy (FE-SEM). Various globally distributed Glaucocystis strains were delineated into six species, based on differences in in situ ultrastructural features of the protoplast periphery under UHVEM tomography and in the mother cell wall by FE-SEM, as well as differences in the light microscopic characteristics and molecular phylogenetic results. The present work on Glaucocystis provides a model case of new-generation taxonomy. PMID:27383831

  10. Cyanamide mediated synthesis under plausible primitive earth conditions. VI - The synthesis of glycerol and glycerophosphates

    NASA Technical Reports Server (NTRS)

    Epps, D. E.; Nooner, D. W.; Eichberg, J.; Sherwood, E.; Oro, J.

    1979-01-01

    The formation of glycerol occurs when a solution of DL-glyceraldehyde is heated in the presence of hydrogen sulfide at room temperature. DL-glyceraldehyde and dihydroxyacetone treated with hydrazine, as well as DL-glyceraldehyde incubated with formaldehyde are also partially converted to glycerol. The yields of the above reactions are from approximately 1% to about 3%. The formation of glycerophosphates occurs when glycerol is heated with ammonium dihydrogen phosphate and either urea or cyanamide. The yield of glycerophosphates is about 30%, most of which is sn-glycero-1(3)-phosphate. These findings indicate that glycerol and sn-glycero-3-phosphate, which are moieties of glycerolipids, could have been formed under conditions which may have prevailed on the primitive earth.

  11. Computer simulations of the restricted primitive model at very low temperature and density.

    PubMed

    Valeriani, Chantal; Camp, Philip J; Zwanikken, Jos W; van Roij, René; Dijkstra, Marjolein

    2010-03-17

    The problem of successfully simulating ionic fluids at low temperature and low density states is well known in the simulation literature: using conventional methods, the system is not able to equilibrate rapidly due to the presence of strongly associated cation-anion pairs. In this paper we present a numerical method for speeding up computer simulations of the restricted primitive model (RPM) at low temperatures (around the critical temperature) and at very low densities (down to 10(-10)σ(-3), where σ is the ion diameter). Experimentally, this regime corresponds to typical concentrations of electrolytes in nonaqueous solvents. As far as we are aware, this is the first time that the RPM has been equilibrated at such extremely low concentrations. More generally, this method could be used to equilibrate other systems that form aggregates at low concentrations. PMID:21389456

  12. A numerical study of the string function using a primitive equation ocean model

    NASA Astrophysics Data System (ADS)

    Tyler, R. H.; Käse, R.

    We use results from a primitive-equation ocean numerical model (SCRUM) to test a theoretical 'string function' formulation put forward by Tyler and Käse in another article in this issue. The string function acts as a stream function for the large-scale potential energy flow under the combined beta and topographic effects. The model results verify that large-scale anomalies propagate along the string function contours with a speed correctly given by the cross-string gradient. For anomalies having a scale similar to the Rossby radius, material rates of change in the layer mass following the string velocity are balanced by material rates of change in relative vorticity following the flow velocity. It is shown that large-amplitude anomalies can be generated when wind stress is resonant with the string function configuration.

  13. Melt production beneath Mt. Shasta from boron data in primitive melt inclusions.

    PubMed

    Rose, E F; Shimizu, N; Layne, G D; Grove, T L

    2001-07-13

    Most arc magmas are thought to be generated by partial melting of the mantle wedge induced by infiltration of slab-derived fluids. However, partial melting of subducting oceanic crust has also been proposed to contribute to the melt generation process, especially when young and hot lithosphere is being subducted. The isotopic composition of boron measured in situ in olivine-hosted primitive melt inclusions in a basaltic andesite from Mt. Shasta, California, is characterized by large negative values that are also highly variable (delta(11)B = -21.3 to -0.9 per mil). The boron concentrations, from 0.7 to 1.6 parts per million, are lower than in most other arc lavas. The relation between concentration and isotopic composition of boron observed here supports a hypothesis that materials left after dehydration of the subducting slab may have contributed to the generation of basaltic andesite lavas at Mt. Shasta. PMID:11452119

  14. IODP Expedition 345: Primitive Layered Gabbros From Fast-Spreading Lower Oceanic Crust

    NASA Astrophysics Data System (ADS)

    Ildefonse, Benoit; Gillis, Kathryn M.; Snow, Jonathan E.; Klaus, Adam

    2014-05-01

    Three-quarters of the ocean crust formed at fast-spreading ridges is composed of plutonic rocks whose mineral assemblages, textures and compositions record the history of melt transport and crystallization between the mantle and the seafloor. However, owing to the nearly continuous overlying extrusive upper crust, sampling in situ the lower crust is challenging. Hence, models for understanding the formation of the lower crust are based essentially on geophysical studies and ophiolites. Integrated Ocean Drilling Program (IODP) Expedition 345 recovered the first significant sections of primitive, modally layered gabbroic rocks from the lowermost plutonic crust formed at a fast-spreading ridge, and exposed at the Hess Deep Rift (Gillis et al., Nature, 2014, doi:10.1038/nature12778). Drilling Site U1415 is located along the southern slope of the intrarift ridge. The primary science results were obtained from coring of two ~110 m deep reentry holes and one 35-m-deep single-bit hole, all co-located within an ~100-m-wide area. Olivine gabbro and troctolite are the dominant plutonic rock types recovered, with minor gabbro, clinopyroxene oikocryst-bearing gabbroic rocks, and gabbronorite. All rock types are primitive to moderately evolved, with Mg# 89-76, and exhibit cumulate textures similar to ones found in layered mafic intrusions and some ophiolites. Spectacular modal and grain size layering, prevalent in >50% of the recovered core, confirm a long held paradigm that such rocks are a key constituent of the lowermost ocean crust formed at fast-spreading ridges. Magmatic foliation is largely defined by the shape-preferred orientation of plagioclase. It is moderate to strong in intervals with simple modal layering but weak to absent in troctolitic intervals and typically absent in intervals with heterogeneous textures and/or diffuse banding. Geochemical analysis of these primitive lower plutonics, in combination with previous geochemical data for shallow-level plutonics

  15. IODP Exp 345: Primitive Layered Gabbros From Fast-Spreading Lower Oceanic Crust

    NASA Astrophysics Data System (ADS)

    Gillis, K. M.; Snow, J. E.; Klaus, A.

    2013-12-01

    Plutonic rocks from the lower ocean crust formed at fast-spreading ridges provide a record of the history of melt transport and crystallization between the mantle and the seafloor. Despite the significance of these rocks, sampling them in situ has proven extremely challenging. This means our models for understanding the formation of the lower crust are based largely on geophysical studies and ophiolites that did not form at typical mid-ocean ridges. Integrated Ocean Drilling Program (IODP) Expedition 345 recovered the first significant recovery of primitive modally layered gabbroic rocks from the lowermost plutonic crust from a fast-spreading ridge exposed at the Hess Deep Rift. Drilling was focused at Site U1415, located along the southern slope of the intrarift ridge. The primary science results were obtained from coring of two ~110 m deep reentry holes and one 35-m-deep single-bit hole, all co-located within an ~100-m-wide area. Olivine gabbro and troctolite are the dominant plutonic rock types recovered, with minor gabbro, clinopyroxene oikocryst-bearing gabbroic lithologies, and gabbronorite. All rock types are primitive (Mg# 76-89) and exhibit cumulate textures similar to ones found in layered mafic intrusions and some ophiolite complexes. Spectacular modal and grain size layering, prevalent in >50% of the recovered core, confirm a long held paradigm that such rocks are a key constituent of the lowermost ocean crust formed at fast-spreading ridges. Magmatic foliation is largely defined by the shape-preferred orientation of plagioclase. It is moderate to strong in intervals with simple modal layering but weak to absent in troctolitic intervals and typically absent in intervals with heterogeneous textures and/or diffuse banding. Geochemical analysis of these primitive lower plutonics, in combination with previous geochemical data for shallow-level plutonics, sheeted dikes and lavas, provides the first robust estimate of the bulk composition of crust formed at a

  16. Posterior Malformations in Dact1 mutant mice arise through misregulated Vangl2 at the Primitive Streak

    PubMed Central

    Suriben, Rowena; Kivimäe, Saul; Fisher, Daniel A.; Moon, Randall T.; Cheyette, Benjamin N.R.

    2009-01-01

    Mice homozygous for mutations in Dact1 (Dpr/Frodo) phenocopy human malformations involving the spine, genitourinary system, and distal digestive tract. We trace this phenotype to disrupted germ layer morphogenesis at the primitive streak (PS). Remarkably, heterozygous mutation of Vangl2, a transmembrane component of the Planar Cell Polarity (PCP) pathway, rescues recessive Dact1 phenotypes, whereas loss of Dact1 reciprocally rescues semidominant Vangl2 phenotypes. We show that Dact1, an intracellular protein, forms a complex with Vangl2. In Dact1 mutants, Vangl2 is increased at the PS where cells ordinarily undergo an epithelial-mesenchymal transition. This is associated with abnormal E-cadherin distribution and changes in biochemical measures of the PCP pathway. We conclude that Dact1 contributes to morphogenesis at the PS by regulating Vangl2 upstream of cell adhesion and the PCP pathway. PMID:19701191

  17. Photochemical reactions of water and carbon monoxide in earth's primitive atmosphere

    NASA Technical Reports Server (NTRS)

    Bar-Nun, A.; Chang, S.

    1983-01-01

    The gas-phase photolysis of H2O at 1849 A in the presence of CO yields mainly CO2 and H2 and a variety of organic compounds, including C1-C3 hydrocarbons, alcohols, aldehydes, acetone, and acetic acid. The overall quantum yield for conversion of CO to organic compounds varies between 0.23 and 0.03 as a function of the CO abundance. These results indicate that even if primitive earth's atmosphere initially contained no molecular hydrogen and contained carbon only in the form of CO or a mixture of CO and CO2, the prebiotic environment would have become enriched with a variety of organic compounds produced by photochemical processes.

  18. Motor primitives and synergies in spinal cord and after injury– the current state of play

    PubMed Central

    Giszter, Simon F.; Hart, Corey B.

    2013-01-01

    Modular pattern generator elements, also known as burst synergies or motor primitives, have become a useful and important way of describing motor behavior, albeit controversial. It is suggested that these synergy elements may comprise part of the pattern shaping layers of a McCrea/Rybak two layer pattern generator, as well as being used in other ways in spinal cord. The data supporting modular synergies ranges across species including man and encompasses motor pattern analyses and neural recordings. Recently, synergy persistence and changes following clinical trauma have been presented. These new data underscore the importance of understanding the modular structure of motor behaviors and the underlying circuitry in order to best provide principled therapies and to understand phenomena reported in the clinic. We discuss the evidence and different viewpoints on modularity, the neural underpinnings identified thus far, and possible critical issues for the future of this area. PMID:23531009

  19. Persistent Primitive Hypoglossal Artery (PPHA) - A Rare Anomaly with Literature Review.

    PubMed

    Srinivas, M R; Vedaraju, K S; Manjappa, B H; Nagaraj, B R

    2016-01-01

    Persistent primitive hypoglossal artery (PPHA) is a rare embryonic carotid vertebrobasilar artery anastomosis. Hypoglossal artery arises from the internal carotid artery (ICA) between the C1 and C2 vertebral levels and traverses through the hypoglossal canal to join the vertebro-basilar system. We present a rare case of an anomalous right sided PPHA as a sole supply to posterior circulation of brain with absent/hypoplastic bilateral vertebral arteries in a two year child who had presented with acute left sided haemiplegia. Three dimensional time of flight magnetic resonance angiography identified an anomalous vessel arising from the right internal carotid artery at the level of axis vertebra and joining the vertebra-basilar arterial system after coursing through the right hypoglossal canal. This anomaly when present may predispose the person to aneurysm formation, ischaemia in the posterior circulation and atherosclerotic disease of the intracranial vessels. PMID:26894148

  20. Persistent Primitive Hypoglossal Artery (PPHA) – A Rare Anomaly with Literature Review

    PubMed Central

    Vedaraju, KS; Manjappa, BH; Nagaraj, BR

    2016-01-01

    Persistent primitive hypoglossal artery (PPHA) is a rare embryonic carotid vertebrobasilar artery anastomosis. Hypoglossal artery arises from the internal carotid artery (ICA) between the C1 and C2 vertebral levels and traverses through the hypoglossal canal to join the vertebro-basilar system. We present a rare case of an anomalous right sided PPHA as a sole supply to posterior circulation of brain with absent/hypoplastic bilateral vertebral arteries in a two year child who had presented with acute left sided haemiplegia. Three dimensional time of flight magnetic resonance angiography identified an anomalous vessel arising from the right internal carotid artery at the level of axis vertebra and joining the vertebra-basilar arterial system after coursing through the right hypoglossal canal. This anomaly when present may predispose the person to aneurysm formation, ischaemia in the posterior circulation and atherosclerotic disease of the intracranial vessels. PMID:26894148

  1. Abundant ammonia in primitive asteroids and the case for a possible exobiology.

    PubMed

    Pizzarello, Sandra; Williams, Lynda B; Lehman, Jennifer; Holland, Gregory P; Yarger, Jeffery L

    2011-03-15

    Carbonaceous chondrites are asteroidal meteorites that contain abundant organic materials. Given that meteorites and comets have reached the Earth since it formed, it has been proposed that the exogenous influx from these bodies provided the organic inventories necessary for the emergence of life. The carbonaceous meteorites of the Renazzo-type family (CR) have recently revealed a composition that is particularly enriched in small soluble organic molecules, such as the amino acids glycine and alanine, which could support this possibility. We have now analyzed the insoluble and the largest organic component of the CR2 Grave Nunataks (GRA) 95229 meteorite and found it to be of more primitive composition than in other meteorites and to release abundant free ammonia upon hydrothermal treatment. The findings appear to trace CR2 meteorites' origin to cosmochemical regimes where ammonia was pervasive, and we speculate that their delivery to the early Earth could have fostered prebiotic molecular evolution. PMID:21368183

  2. Iron oxide bands in the visible and near-infrared reflectance spectra of primitive asteroids

    NASA Technical Reports Server (NTRS)

    Jarvis, Kandy S.; Vilas, Faith; Gaffey, Michael J.

    1993-01-01

    High resolution reflectance spectra of primitive asteroids (C, P, and D class and associated subclasses) have commonly revealed an absorption feature centered at 0.7 microns attributed to an Fe(2+)-Fe(3+) charge transfer transition in iron oxides and/or oxidized iron in phyllosilicates. A smaller feature identified at 0.43 microns has been attributed to an Fe(3+) spin-forbidden transition in iron oxides. In the spectra of the two main-belt primitive asteroids 368 Haidea (D) and 877 Walkure (F), weak absorption features which were centered near the location of 0.60-0.65 microns and 0.80-0.90 microns prompted a search for features at these wavelengths and an attempt to identify their origin(s). The CCD reflectance spectra obtained between 1982-1992 were reviewed for similar absorption features located near these wavelengths. The spectra of asteroids in which these absorption features have been identified are shown. These spectra are plotted in order of increasing heliocentric distance. No division of the asteroids by class has been attempted here (although the absence of these features in the anhydrous S-class asteroids, many of which have presumably undergone full heating and differentiation should be noted). For this study, each spectrum was treated as a continuum with discrete absorption features superimposed on it. For each object, a linear least squares fit to the data points defined a simple linear continuum. The linear continuum was then divided into each spectrum, thus removing the sloped continuum and permitting the intercomparison of residual spectral features.

  3. Octopus arm movements under constrained conditions: adaptation, modification and plasticity of motor primitives.

    PubMed

    Richter, Jonas N; Hochner, Binyamin; Kuba, Michael J

    2015-04-01

    The motor control of the eight highly flexible arms of the common octopus (Octopus vulgaris) has been the focus of several recent studies. Our study is the first to manage to introduce a physical constraint to an octopus arm and investigate the adaptability of stereotypical bend propagation in reaching movements and the pseudo-limb articulation during fetching. Subjects (N=6) were placed inside a transparent Perspex box with a hole at the center that allowed the insertion of a single arm. Animals had to reach out through the hole toward a target, to retrieve a food reward and fetch it. All subjects successfully adjusted their movements to the constraint without an adaptation phase. During reaching tasks, the animals showed two movement strategies: stereotypical bend propagation reachings, which were established at the hole of the Perspex box and variant waving-like movements that showed no bend propagations. During fetching movements, no complete pseudo-joint fetching was observed outside the box and subjects pulled their arms through the hole in a pull-in like movement. Our findings show that there is some flexibility in the octopus motor system to adapt to a novel situation. However, at present, it seems that these changes are more an effect of random choices between different alternative motor programs, without showing clear learning effects in the choice between the alternatives. Interestingly, animals were able to adapt the fetching movements to the physical constraint, or as an alternative explanation, they could switch the motor primitive fetching to a different motor primitive 'arm pulling'. PMID:25687436

  4. Phylogenetic relationships and the primitive X chromosome inferred from chromosomal and satellite DNA analysis in Bovidae.

    PubMed

    Chaves, Raquel; Guedes-Pinto, Henrique; Heslop-Harrison, John S

    2005-10-01

    The early phylogeny of the 137 species in the Bovidae family is difficult to resolve; knowledge of the evolution and relationships of the tribes would facilitate comparative mapping, understanding chromosomal evolution patterns and perhaps assist breeding and domestication strategies. We found that the study of the presence and organization of two repetitive DNA satellite sequences (the clone pOaKB9 from sheep, a member of the 1.714 satellite I family and the pBtKB5, a 1.715 satellite I clone from cattle) on the X and autosomal chromosomes by in situ hybridization to chromosomes from 15 species of seven tribes, was informative. The results support a consistent phylogeny, suggesting that the primitive form of the X chromosome is acrocentric, and has satellite I sequences at its centromere. Because of the distribution of the ancient satellite I sequence, the X chromosome from the extant Tragelaphini (e.g. oryx), rather than Caprini (sheep), line is most primitive. The Bovini (cow) and Tragelaphini tribes lack the 1.714 satellite present in the other tribes, and this satellite is evolutionarily younger than the 1.715 sequence, with absence of the 1.714 sequence being a marker for the Bovini and Tragelaphini tribes (the Bovinae subfamily). In the other tribes, three (Reduncini, Hippotragini and Aepycerotini) have both 1.714 and 1.715 satellite sequences present on both autosomes and the X chromosome. We suggest a parallel event in two lineages, leading to X chromosomes with the loss of 1.715 satellite from the Bovini, and the loss of both 1.714 and 1.715 satellites in a monophyletic Caprini and Alcelaphini lineage. The presence and X chromosome distribution of these satellite sequences allow the seven tribes to be distributed to four groups, which are consistent with current diversity estimates, and support one model to resolve points of separation of the tribes. PMID:16191610

  5. Regional primitive equation modeling and analysis of the polymode data set

    NASA Astrophysics Data System (ADS)

    Spall, Michael A.

    A regional, hybrid coordinate, primitive equation (PE) model is applied to a 60-day period of the POLYMODE data set. The initialization techniques and open boundary conditions introduced by Spall and Robinson are shown to produce stable, realistic, and reasonably accurate hindcasts for the 2-month data set. Comparisons with quasi-geostrophic (QG) modeling studies indicate that the PE model reproduced the jet formation that dominates the region more accurately than did the QG model. When the PE model used boundary conditions that were partially adjusted by the QG model, the resulting fields were very similar to the QG fields, indicating a rapid degradation of small-scale features near the boundaries in the QG calculation. A local term-by-term primitive equation energy and vorticity analysis package is also introduced. The full vorticity, horizontal divergence, kinetic energy, and available gravitational energy equations are solved diagnostically from the output of the regional PE model. Through the analysis of a time series of horizontal maps, the dominant processes in the flow are illustrated. The individual terms are also integrated over the region of jet formation to highlight the net balances as a function of time. The formation of the deep thermocline jet is shown to be due to horizontal advection through the boundary, baroclinic conversion in the deep thermocline and vertical pressure work, which exports the deep energy to the upper thermocline levels. It is concluded here that the PE model reproduces the observed jet formation better than the QG model because of the increased horizontal advection and stronger vertical pressure work. Although the PE model is shown to be superior to the QG model in this application, it is believed that both PE and QG models can play an important role in the regional study of mid-ocean mesoscale eddies.

  6. Locust retinoid X receptors: 9-Cis-retinoic acid in embryos from a primitive insect

    PubMed Central

    Nowickyj, Shaun M.; Chithalen, James V.; Cameron, Don; Tyshenko, Michael G.; Petkovich, Martin; Wyatt, Gerard R.; Jones, Glenville; Walker, Virginia K.

    2008-01-01

    The retinoid X receptor (RXR) is activated by its often elusive cognate ligand, 9-cis-retinoic acid (9-cis-RA). In flies and moths, molting is mediated by a heterodimer ecdysone receptor consisting of the ecdysone monomer (EcR) and an RXR homolog, ultraspiracle (USP); the latter is believed to have diverged from its RXR origin. In the more primitive insect, Locusta migratoria (Lm), RXR is more similar to human RXRs than to USPs. LmRXR was detected in early embryos when EcR transcripts were absent, suggesting another role apart from ecdysone signaling. Recombinant LmRXRs bound 9-cis-RA and all-trans-RA with high affinity (IC50 = 61.2–107.7 nM; Kd = 3 nM), similar to human RXR. To determine whether specific binding had functional significance, the presence of endogenous retinoids was assessed. Embryos were extracted by using modified Bligh and Dyer and solid-phase protocols to avoid the oily precipitate that makes this material unsuitable for assay. These extracts contained retinoids (5.4 nM) as assessed by RA-inducible Cyp26A1-promoter luciferase reporter cell lines. Furthermore, the use of HPLC and MS confirmed the presence of retinoids and identified in any embryo, 9-cis-RA, in addition to all-trans-RA. We estimate that whole embryos contain 3 nM RA, including 9-cis-RA at a concentration of 1.6 nM. These findings strongly argue for a functional role for retinoids in primitive insects and favor a model where signaling through the binding of 9-cis-RA to its RXR is established relatively early in evolution and embryonic development. PMID:18606996

  7. New noble gas data of primitive and differentiated achondrites including Northwest Africa 011 and Tafassasset

    NASA Astrophysics Data System (ADS)

    Patzer, A.; Schultz, L.; Franke, L.

    2003-10-01

    This work reports on the noble gas inventory of 3 new acapulcoites, 3 brachinites, 2 new eucrites from the Dar al Gani region in Libya, the unique achondrite Dar al Gani (DaG) 896 from the same locality, the new eucrite-like achondrite Northwest Africa (NWA) 011, and the controversial sample Tafassasset. We determined cosmic ray exposure and gas retention ages, evaluated shielding conditions, and discuss the trapped noble gas component of the specimens. All exposure ages are within the known range of stony meteorites and partly confirm previously established age clusters. Shielding conditions vary, suggesting substantial shielding for all 3 brachinites and Tafassasset. We cannot exclude, however, that the Mg-rich composition of brachinites simply simulates heavy shielding. Regarding the trapped component, we found Q-like compositions only for the acapulcoite Thiel Mountains (TIL) 99002. The brachinite Elephant Moraine (EET) 99402 yields a high, subsolar 36Ar/ 132Xe ratio of ~400 along with a slightly elevated 84Kr/132Xe ratio, indicating minor atmospheric contamination. All the other samples, particularly the eucrite DaG 983, are characterized by clearly elevated Ar/Kr/Xe ratios due to significant terrestrial alteration. Tafassasset exhibits noble gas parameters that are different from those of CR chondrites, including a relatively high cosmic ray exposure age, the absence of a solar component, low 132Xe concentrations, a low trapped 36Ar/132Xe ratio of ~30, and a noticeable amount of radiogenic 129Xe. Similar attributes have been observed for some primitive achondrites. These attributes are also consistent with the metamorphic character of the sample. We, therefore, consider Tafassasset's noble gas record to be inconclusive as to its classification (primitive achondrite versus metamorphosed CR chondrite).

  8. p120 Catenin-Mediated Stabilization of E-Cadherin Is Essential for Primitive Endoderm Specification

    PubMed Central

    Haenebalcke, Lieven; Stryjewska, Agata; De Rycke, Riet; Lemeire, Kelly; Huylebroeck, Danny; Stemmler, Marc P.; Wirth, Dagmar; Haigh, Jody J.; van Hengel, Jolanda; van Roy, Frans

    2016-01-01

    E-cadherin-mediated cell-cell adhesion is critical for naive pluripotency of cultured mouse embryonic stem cells (mESCs). E-cadherin-depleted mESC fail to downregulate their pluripotency program and are unable to initiate lineage commitment. To further explore the roles of cell adhesion molecules during mESC differentiation, we focused on p120 catenin (p120ctn). Although one key function of p120ctn is to stabilize and regulate cadherin-mediated cell-cell adhesion, it has many additional functions, including regulation of transcription and Rho GTPase activity. Here, we investigated the role of mouse p120ctn in early embryogenesis, mESC pluripotency and early fate determination. In contrast to the E-cadherin-null phenotype, p120ctn-null mESCs remained pluripotent, but their in vitro differentiation was incomplete. In particular, they failed to form cystic embryoid bodies and showed defects in primitive endoderm formation. To pinpoint the underlying mechanism, we undertook a structure-function approach. Rescue of p120ctn-null mESCs with different p120ctn wild-type and mutant expression constructs revealed that the long N-terminal domain of p120ctn and its regulatory domain for RhoA were dispensable, whereas its armadillo domain and interaction with E-cadherin were crucial for primitive endoderm formation. We conclude that p120ctn is not only an adaptor and regulator of E-cadherin, but is also indispensable for proper lineage commitment. PMID:27556156

  9. p120 Catenin-Mediated Stabilization of E-Cadherin Is Essential for Primitive Endoderm Specification.

    PubMed

    Pieters, Tim; Goossens, Steven; Haenebalcke, Lieven; Andries, Vanessa; Stryjewska, Agata; De Rycke, Riet; Lemeire, Kelly; Hochepied, Tino; Huylebroeck, Danny; Berx, Geert; Stemmler, Marc P; Wirth, Dagmar; Haigh, Jody J; van Hengel, Jolanda; van Roy, Frans

    2016-08-01

    E-cadherin-mediated cell-cell adhesion is critical for naive pluripotency of cultured mouse embryonic stem cells (mESCs). E-cadherin-depleted mESC fail to downregulate their pluripotency program and are unable to initiate lineage commitment. To further explore the roles of cell adhesion molecules during mESC differentiation, we focused on p120 catenin (p120ctn). Although one key function of p120ctn is to stabilize and regulate cadherin-mediated cell-cell adhesion, it has many additional functions, including regulation of transcription and Rho GTPase activity. Here, we investigated the role of mouse p120ctn in early embryogenesis, mESC pluripotency and early fate determination. In contrast to the E-cadherin-null phenotype, p120ctn-null mESCs remained pluripotent, but their in vitro differentiation was incomplete. In particular, they failed to form cystic embryoid bodies and showed defects in primitive endoderm formation. To pinpoint the underlying mechanism, we undertook a structure-function approach. Rescue of p120ctn-null mESCs with different p120ctn wild-type and mutant expression constructs revealed that the long N-terminal domain of p120ctn and its regulatory domain for RhoA were dispensable, whereas its armadillo domain and interaction with E-cadherin were crucial for primitive endoderm formation. We conclude that p120ctn is not only an adaptor and regulator of E-cadherin, but is also indispensable for proper lineage commitment. PMID:27556156

  10. Primitive Early Eocene bat from Wyoming and the evolution of flight and echolocation.

    PubMed

    Simmons, Nancy B; Seymour, Kevin L; Habersetzer, Jörg; Gunnell, Gregg F

    2008-02-14

    Bats (Chiroptera) represent one of the largest and most diverse radiations of mammals, accounting for one-fifth of extant species. Although recent studies unambiguously support bat monophyly and consensus is rapidly emerging about evolutionary relationships among extant lineages, the fossil record of bats extends over 50 million years, and early evolution of the group remains poorly understood. Here we describe a new bat from the Early Eocene Green River Formation of Wyoming, USA, with features that are more primitive than seen in any previously known bat. The evolutionary pathways that led to flapping flight and echolocation in bats have been in dispute, and until now fossils have been of limited use in documenting transitions involved in this marked change in lifestyle. Phylogenetically informed comparisons of the new taxon with other bats and non-flying mammals reveal that critical morphological and functional changes evolved incrementally. Forelimb anatomy indicates that the new bat was capable of powered flight like other Eocene bats, but ear morphology suggests that it lacked their echolocation abilities, supporting a 'flight first' hypothesis for chiropteran evolution. The shape of the wings suggests that an undulating gliding-fluttering flight style may be primitive for bats, and the presence of a long calcar indicates that a broad tail membrane evolved early in Chiroptera, probably functioning as an additional airfoil rather than as a prey-capture device. Limb proportions and retention of claws on all digits indicate that the new bat may have been an agile climber that employed quadrupedal locomotion and under-branch hanging behaviour. PMID:18270539

  11. Endoscopic surveillance of head and neck cancer in patients with esophageal squamous cell carcinoma

    PubMed Central

    Kato, Minoru; Ishihara, Ryu; Hamada, Kenta; Tonai, Yusuke; Yamasaki, Yasushi; Matsuura, Noriko; Kanesaka, Takashi; Yamamoto, Sachiko; Akasaka, Tomofumi; Hanaoka, Noboru; Takeuchi, Yoji; Higashino, Koji; Uedo, Noriya; Iishi, Hiroyasu

    2016-01-01

    Background and study aims: Multiple squamous cell carcinomas (SCCs) frequently arise in the upper aerodigestive tract, referred to as the field cancerization phenomenon. The aim of this study was to elucidate the detailed clinical features of second primary head and neck (H&N) SCCs arising in patients with esophageal SCC. Patients and methods: A total of 818 patients underwent endoscopic resection for superficial esophageal cancer between January 2006 and December 2013. Of these, 439 patients met our inclusion criteria, and we retrospectively investigated the incidence, primary sites, and stages of second primary H&N SCCs in these patients. Results: A total of 53 metachronous H&N SCCs developed in 40 patients after a median follow-up period of 46 months (range 9 – 109). The cumulative incidence rates of metachronous H&N SCCs at 3, 5, and 7 years were 5.3 %, 9.7 %, and 17.2 %, respectively. These lesions were frequently located at pyriform sinus or in the posterior wall of the pharynx (70 %, 37/53 lesions). Most of the lesions were detected at an early stage, though 4 lesions were associated with lymph node metastasis when their primary sites were detected (1 postcricoid area, 2 posterior wall of hypopharynx, and 1 lateral wall of oropharynx). Conclusions: Patients with esophageal SCC should undergo careful inspection of the pyriform sinus and posterior wall of the pharynx for detection of H&N SCCs. Methods to open the hypopharyngeal space, such as the Valsalva maneuver, should be included in the surveillance program. PMID:27556090

  12. Characteristics and outcomes of endoscopically resected colorectal cancers that arose from sessile serrated adenomas and traditional serrated adenomas

    PubMed Central

    Seo, Ji Yeon; Choi, Seung Ho; Chun, Jaeyoung; Choi, Ji Min; Jin, Eun Hyo; Hwang, Sung Wook; Im, Jong Pil; Kim, Sang Gyun; Kim, Joo Sung

    2016-01-01

    Background/Aims The efficacy and safety of endoscopic resection of colorectal cancer derived from sessile serrated adenomas or traditional serrated adenomas are still unknown. The aims of this study were to verify the characteristics and outcomes of endoscopically resected early colorectal cancers developed from serrated polyps. Methods Among patients who received endoscopic resection of early colorectal cancers from 2008 to 2011, cancers with documented pre-existing lesions were included. They were classified as adenoma, sessile serrated adenoma, or traditional serrated adenoma according to the baseline lesions. Clinical characteristics, pathologic diagnosis, and outcomes were reviewed. Results Overall, 208 colorectal cancers detected from 198 patients were included: 198 with adenoma, five with sessile serrated adenoma, and five with traditional serrated adenoma. The sessile serrated adenoma group had a higher prevalence of high-grade dysplasia (40.0% vs. 25.8%, P<0.001) than the adenoma group. During follow-up, local recurrence did not occur after endoscopic resection of early colorectal cancers developed from serrated polyps. In contrast, two cases of metachronous recurrence were detected within a short follow-up period. Conclusions Cautious observation and early endoscopic resection are recommended when colorectal cancer from serrated polyp is suspected. Colorectal cancers from serrated polyp can be treated successfully with endoscopy. PMID:27433150

  13. Discovering motion primitives for unsupervised grouping and one-shot learning of human actions, gestures, and expressions.

    PubMed

    Yang, Yang; Saleemi, Imran; Shah, Mubarak

    2013-07-01

    This paper proposes a novel representation of articulated human actions and gestures and facial expressions. The main goals of the proposed approach are: 1) to enable recognition using very few examples, i.e., one or k-shot learning, and 2) meaningful organization of unlabeled datasets by unsupervised clustering. Our proposed representation is obtained by automatically discovering high-level subactions or motion primitives, by hierarchical clustering of observed optical flow in four-dimensional, spatial, and motion flow space. The completely unsupervised proposed method, in contrast to state-of-the-art representations like bag of video words, provides a meaningful representation conducive to visual interpretation and textual labeling. Each primitive action depicts an atomic subaction, like directional motion of limb or torso, and is represented by a mixture of four-dimensional Gaussian distributions. For one--shot and k-shot learning, the sequence of primitive labels discovered in a test video are labeled using KL divergence, and can then be represented as a string and matched against similar strings of training videos. The same sequence can also be collapsed into a histogram of primitives or be used to learn a Hidden Markov model to represent classes. We have performed extensive experiments on recognition by one and k-shot learning as well as unsupervised action clustering on six human actions and gesture datasets, a composite dataset, and a database of facial expressions. These experiments confirm the validity and discriminative nature of the proposed representation. PMID:23681992

  14. Endovascular occlusion of a lacerated primitive trigeminal artery during surgical resection of clival chordoma. a case report.

    PubMed

    Baltsavias, G; Valavanis, A

    2010-06-01

    We describe a case of a persistent primitive trigeminal artery (PPTA) coexistent with a clival chordoma. During surgery of the tumor, the partially incorporated PPTA was inadvertently traumatized and ruptured. The operation was discontinued and the PPTA was endovascularly occluded permitting further safe resection of the tumor. PMID:20642897

  15. Medulloblastoma/Primitive neuroectodermal tumor and germ cell tumors: the uncommon but potentially curable primary brain tumors.

    PubMed

    Samkari, Ayman; Hwang, Eugene; Packer, Roger J

    2012-08-01

    This article presents an overview of medulloblastomas, central nervous system primitive neuroectodermal tumors, and germ cell tumors for the practicing oncologist. Discussion includes the definition of these tumors, histopathologic findings, molecular and genetic characteristics, prognoses, and evolution of treatment. PMID:22794288

  16. Distinct regulation of the anterior and posterior myeloperoxidase expression by Etv2 and Gata1 during primitive Granulopoiesis in zebrafish.

    PubMed

    Glenn, Nicole O; Schumacher, Jennifer A; Kim, Hyon J; Zhao, Emma J; Skerniskyte, Jurate; Sumanas, Saulius

    2014-09-01

    Neutrophilic granulocytes are the most abundant type of myeloid cells and form an essential part of the innate immune system. In vertebrates the first neutrophils are thought to originate during primitive hematopoiesis, which precedes hematopoietic stem cell formation. In zebrafish embryos, it has been suggested that primitive neutrophils may originate in two distinct sites, the anterior (ALPM) and posterior lateral plate mesoderm (PLPM). An ETS-family transcription factor Etsrp/Etv2/ER71 has been implicated in vasculogenesis and hematopoiesis in multiple vertebrates. However, its role during neutrophil development is not well understood. Here we demonstrate using zebrafish embryos that Etv2 has a specific cell-autonomous function during primitive neutropoiesis in the anterior lateral plate mesoderm (ALPM) but has little effect on erythropoiesis or the posterior lateral plate mesoderm (PLPM) expression of neutrophil marker myeloperoxidase mpo/mpx. Our results argue that ALPM-derived neutrophils originate from etv2-expressing cells which downregulate etv2 during neutropoiesis. We further show that Scl functions downstream of Etv2 in anterior neutropoiesis. Additionally, we demonstrate that mpx expression within the PLPM overlaps with gata1 expression, potentially marking the cells with a dual myelo-erythroid potential. Intriguingly, initiation of mpx expression in the PLPM is dependent on gata1 but not etv2 function. Our results demonstrate that mpx expression is controlled differently in the ALPM and PLPM regions and describe novel roles for etv2 and gata1 during primitive neutropoiesis. PMID:24956419

  17. Geochemistry and petrology of primitive achondrite meteorites LEW 88280, MAC 88177, ALHA 81187, EET 84302, and LEW 88663

    NASA Technical Reports Server (NTRS)

    Field, Stephen W.

    1992-01-01

    Primitive achondrites are meteorites that have mineral and bulk chemical compositions similar to the most primitive meteorites (chondrites) but have textures similar to more evolved meteorites (achondrites). The unique geochemistry and texture of the primitive achondrites suggest these meteorites may be genetic intermediates between chondrites and achondrites and may preserve evidence of processes occurring in the early solar system. Five primitive achondrites LEW 88280, MAC 88177, ALHA 81187, EET 84302, and LEW 88663 were examined in this study in order to classify the meteorites and to determine processes that have affected them. Bulk chemical analyses of Nap, K2O, CaO, FeO, Cr, Co, Ni, Sc, Ir, Au, As, Sb, Se, Br, Cs, Ba, La, Ce, Nd, Sm, Eu, Tb, Yb, and Lu were determined for each meteorite by Instrumental Neutron Activation Analysis (INAA). Concentrations of Hf, U, and Th were determined for some meteorites. Polished thin sections of the five meteorites were examined in transmitted and reflected light microscopy to identify minerals and examine petrographic relationships. Minerals found in the meteorites include olivine, orthopyroxene, clinopyroxene, plagioclase, Cr-spinel, phosphates, troilite, kamecite, and taenite along with other minor phases. Mineral compositions were determined with an electron microprobe. The initial study suggests that the meteorites have been altered by metamorphic processes although igneous processes may also have played a role in the evolution of these rocks. Further studies of isotope and bulk chemistry are planned for these meteorites.

  18. Transfer and Conceptual Change: The Change Process from the Theoretical Perspectives of Coordination Classes and Phenomenological Primitives

    ERIC Educational Resources Information Center

    Ozdemir, Omer F.

    2013-01-01

    The purpose of this study is to understand the nature of pre-instructional knowledge transferred by students into problem situations and the change process on students' knowledge system during classroom discussions. This study was framed by two interrelated theoretical frameworks on knowledge structures, phenomenological primitives and…

  19. QTL for node of first fruiting branch in a cross of an Upland cotton, Gossypium hirsutum L., cultivar with primitive accession Texas 701

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Primitive cottons (Gossypium spp.) represent resources for genetic improvement for fiber quality, pathogen resistance, and increased tolerances to environmental stresses. Most primitive accessions are photoperiod sensitive and do not flower under the long days of the U.S. cotton belt. Molecular mark...

  20. No Place to Hide: Missing Primitive Stars Outside Milky Way Uncovered

    NASA Astrophysics Data System (ADS)

    2010-02-01

    After years of successful concealment, the most primitive stars outside our Milky Way galaxy have finally been unmasked. New observations using ESO's Very Large Telescope have been used to solve an important astrophysical puzzle concerning the oldest stars in our galactic neighbourhood - which is crucial for our understanding of the earliest stars in the Universe. "We have, in effect, found a flaw in the forensic methods used until now," says Else Starkenburg, lead author of the paper reporting the study. "Our improved approach allows us to uncover the primitive stars hidden among all the other, more common stars." Primitive stars are thought to have formed from material forged shortly after the Big Bang, 13.7 billion years ago. They typically have less than one thousandth the amount of chemical elements heavier than hydrogen and helium found in the Sun and are called "extremely metal-poor stars" [1]. They belong to one of the first generations of stars in the nearby Universe. Such stars are extremely rare and mainly observed in the Milky Way. Cosmologists think that larger galaxies like the Milky Way formed from the merger of smaller galaxies. Our Milky Way's population of extremely metal-poor or "primitive" stars should already have been present in the dwarf galaxies from which it formed, and similar populations should be present in other dwarf galaxies. "So far, evidence for them has been scarce," says co-author Giuseppina Battaglia. "Large surveys conducted in the last few years kept showing that the most ancient populations of stars in the Milky Way and dwarf galaxies did not match, which was not at all expected from cosmological models." Element abundances are measured from spectra, which provide the chemical fingerprints of stars [2]. The Dwarf galaxies Abundances and Radial-velocities Team [3] used the FLAMES instrument on ESO's Very Large Telescope to measure the spectra of over 2000 individual giant stars in four of our galactic neighbours, the Fornax