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Sample records for multiple pulse overlap

  1. Time-of-flight diffractometer with multiple pulse overlap - an example for the application of modern tools for instrument design

    SciTech Connect

    Stuhr, U.; Bauer, G.S.; Wagner, W.

    1997-09-01

    A Time-of-Flight Diffractometer with high pulse rates, allowing multiple frame overlap, is a completely novel design of an instrument dedicated for high resolution strain-field mapping. We elaborated a detailed concept of this instrument applying analytical calculations and Monte Carlo computer simulations. Having established the instrument concept, the computer simulations will now be extended to optimize the total performance of the instrument. To illustrate the necessity and possibilities of applying modem tools for instrument design, we describe, as an example, the different steps towards the development of the detailed design of this instrument, which we intend to build at the Swiss spallation. source SINQ in the near future.

  2. Can Multiple Hereditary Exostoses Overlap With Mesomelic Dysplasia?

    PubMed Central

    Al Kaissi, Ali; Ben Ghachem, Maher; Ben Chehida, Farid; Hofstaetter, Jochen G.; Grill, Franz; Ganger, Rudolf; Kircher, Susanne Gerit

    2016-01-01

    Background We studied an unusual combination of severe short stature, mesomelia (Leri-Weill dyschondrosteosis syndrome), and multiple exostosis in several family subjects over three generations. The pattern of inheritance was compatible with autosomal dominant. Methods Of 21 affected members over three generations, shortness of stature, associated with mesomelia resembling Leri-Weill dyschondrosteosis syndrome with no exostoses was evident in three family subjects. The rest of the family subjects manifested with normal height, and yet multiple exostoses. In this family, the skeletal manifestations were sufficiently variable for the presentation to be with either short stature or scoliosis, a Madelung’ deformity, or with severe hallux valgus associated with exostosis and with Leri-Weill dyschondrosteosis syndrome. Results Subjects with structural chromosomal aberrations of the proband IV-7, who manifested with normal height but with multiple exostoses were excluded via 20 CAG-banded mitoses (there were no microdeletions or microduplication after performing Array-CGH-analysis). In addition, DNA examination for subject IV-8 (male cousin of the proband showed short stature and Leri-Weill dyschondrosteosis syndrome) revealed no evidence of SHOX deletions. Conclusion We described a multigenerational non-consanguineous North African family , in which mesomelic dysplasia, whose clinical and radiological phenotypes resembled dyschondrosteosis, was a prominent feature in three family subjects. Multiple exostoses were evident in several other family subjects (most were with normal height). We would like to emphasize the variability in the phenotypic expression of multiple exostosis, especially the confusion that might arise when the condition appears both clinically and radiologically to be more complicated, and the overall picture might then be overlapped with one of the other bone dysplasias such as Leri-Weill dyschondrosteosis syndrome. PMID:27429682

  3. Multiple overlapping homologies between two rheumatoid antigens and immunosuppressive viruses.

    PubMed Central

    Douvas, A; Sobelman, S

    1991-01-01

    Amino acid (aa) sequence homologies between viruses and autoimmune nuclear antigens are suggestive of viral involvement in disorders such as systemic lupus erythematosus (SLE) and scleroderma. We analyzed the frequency of exact homologies of greater than or equal to 5 aa between 61 viral proteins (19,827 aa), 8 nuclear antigens (3813 aa), and 41 control proteins (11,743 aa). Both pentamer and hexamer homologies between control proteins and viruses are unexpectedly abundant, with hexamer matches occurring in 1 of 3 control proteins (or once every 769 aa). However, 2 nuclear antigens, the SLE-associated 70-kDa antigen and the scleroderma-associated CENP-B protein, are highly unusual in containing multiple homologies to a group of synergizing immunosuppressive viruses. Two viruses, herpes simplex virus 1 (HSV-1) and human immunodeficiency virus 1 (HIV-1), contain sequences exactly duplicated at 15 sites in the 70-kDa antigen and at 10 sites in CENP-B protein. The immediate-early (IE) protein of HSV-1, which activates HIV-1 regulatory functions, contains three homologies to the 70-kDa antigen (two hexamers and a pentamer) and two to CENP-B (a hexamer and pentamer). There are four homologies (including a hexamer) common to the 70-kDa antigen and Epstein-Barr virus, and three homologies (including two hexamers) common to CENP-B and cytomegalovirus. The majority of homologies in both nuclear antigens are clustered in highly charged C-terminal domains containing epitopes for human autoantibodies. Furthermore, most homologies have a contiguous or overlapping distribution, thereby creating a high density of potential epitopes. In addition to the exact homologies tabulated, motifs of matching sequences are repeated frequently in these domains. Our analysis suggests that coexpression of heterologous viruses having common immunosuppressive functions may generate autoantibodies cross-reacting with certain nuclear proteins. PMID:1712488

  4. Management of Complicated Aortic Aneurysms Using Multiple Overlapping Uncovered Stents

    PubMed Central

    Zhang, Yongxue; Teng, Zhongzhao; Lu, Qingsheng; Zhao, Zhiqing; Bao, Junmin; Feng, Xiang; Feng, Rui; Chen, Zengsheng; Huang, Yuan; Sadat, Umar; Gillard, Jonathan H; Jing, Zaiping

    2014-01-01

    Abstract This study sought to report the mid-term outcome of a modified flow-diverting strategy in the treatment of complicated aortic aneurysms of different morphology. Historical data suggested aortic aneurysm expansion and rupture after endovascular treatment with current commercial flow-diverters, indicating the essentiality of further investigation of this technique prior to its large-scale clinical application. An alternative flow-diverting strategy using layer-by-layer assembled multiple overlapping uncovered stents was employed in this study. The treatment outcome in aneurysms of different morphology (saccular, fusiform, and dissecting) was assessed during a mid-term follow-up period. Of 42 patients enrolled in this study (30 male, mean age: 63.3 years), technical success was achieved in 40 cases. During an average follow-up period of 20.9 months, mean aneurysm diameter shrunk from 53.4 ± 13.6 mm to 48.8 ± 13.9 mm (P < 0.001), while stent-induced sac thrombosis ratio increased significantly (18.1 ± 14.9% to 93.6 ± 9.5%, P < 0.001). The majority of side branches (74/76 major visceral branches, 237/244 minor segmental arteries), covered by 3.3 stents on average, maintained their patency after stenting. Saccular aneurysms manifested the highest thrombus deposition speed (18/20 were totally thrombosed within 12 months) and most significant shrinkage (51.4 ± 13.3 mm pre-operatively vs 43.5 ± 10.2 mm during follow-up, P < 0.001) compared with fusiform and dissecting aneurysms. This modified flow-diverting strategy could be a feasible alternative in the management of complicated aortic aneurysms where vital branches need to be preserved. The treatment outcome may depend on the aneurysm type. Further studies with larger patient cohort and longer follow-up are required to substantiate these results. PMID:25501077

  5. A Laser Lock System using Multiple Overlapping Beams

    NASA Astrophysics Data System (ADS)

    Harper, Stuart; Francis, Ben; Erickson, Christopher; Durfee, Dallin

    2010-10-01

    We describe a system wherein the lock of trapping, ionizing, and ion resonance lasers for a Sr experiment are bootstrapped together in a single neutral atom vapor cell. This is done by overlapping beams to optically pump the atoms into the necessary states.

  6. Mof-Tree: A Spatial Access Method To Manipulate Multiple Overlapping Features.

    ERIC Educational Resources Information Center

    Manolopoulos, Yannis; Nardelli, Enrico; Papadopoulos, Apostolos; Proietti, Guido

    1997-01-01

    Investigates the manipulation of large sets of two-dimensional data representing multiple overlapping features, and presents a new access method, the MOF-tree. Analyzes storage requirements and time with respect to window query operations involving multiple features. Examines both the pointer-based and pointerless MOF-tree representations.…

  7. A Digital Ultrasonic Pulse-Echo Overlap System and Algorithm for Unambiguous Determination of Pulse Transit Time

    SciTech Connect

    Cristian,P.; Rickel, D.; Migliori, A.; Zhang, J.; Zhao, Y.; Leisure, R.; Li, B.

    2005-01-01

    We report an evolution of an all-digital ultrasonic pulse technique for measurements of elastic constants of solids. An unambiguous analytical procedure is described for determining the correct time delay of echoes without any need for actual echo overlap. We also provide a simple procedure for making corrections for transducer-bond-induced phase shifts. The precision of a measurement made with this system at ambient temperature exceeds one part in 107 without the use of mixers, gates, time delays, and other complications normally associated with such measurements.

  8. Experimental Results for Temporally Overlapping Pulses from Quantel EverGreen 200 Laser

    NASA Technical Reports Server (NTRS)

    Watkins, A. Neal

    2013-01-01

    This report will detail the experimental results and observations obtained while investigating the feasibility of temporally overlapping the two laser pulses from a Quantel EverGreen 200 Laser. This laser was specifically designed for Particle Imaging Velocimetry (PIV) applications and operate by emitting two 532 nm laser pulses that are seperated by an adjustable finite time (typically on the order of ten to hundreds of microseconds). However, the use of this model laser has found recent application for Pressure Sensitive Paint (PSP) testing, especially for rotorcraft research. For this testing, it is desired to only use one laser pulse. While this is easily done by only firing one of the laser heads, more excitation energy could conceivably be had if both laser heads are fired with zero pulse separation. In addition, recently large field-of-view PIV measurements have become possible and need ever increasing laser power to illuminate the larger areas. For this work, two different methods of timing the laser are investigated using both a traditional power meter to monitor laser power as well as a fast photodiode to determine pulse separation. The results are presented here as well as some simple implications for PIV experiments using these methods.

  9. Multiple-beam pulse shaping and preamplification

    SciTech Connect

    Wilcox, R.B.; VanWonterghem, B.W.; Burkhart, S.C.; Davin, J.M.

    1994-11-09

    Glass fusion laser systems typically use a master oscillator-power amplifier (MOPA) architecture, where control of the optical pulse temporal and spatial parameters is accomplished mainly in the master oscillator and low power optics. The pulses from this low power ``front end`` are amplified in the power amplifier, which modifies the pulse shape temporally and spatially. Nonlinear frequency conversion crystals following the amplifier further change the pulse before it reaches the target. To effectively control the optical pulse on target for different types of experiments, and compensate for nonlinearity in the preceding optics, the front end system must be versatile enough to easily control many pulse parameters over a large range. The front end pulse generation system described in this article represents a new approach to this problem. The proposed National Ignition Facility (NIF) has 192 beamlines, each of which requires an input pulse of up to 12 Joules in around 4 ns equivalent square pulse length. Considerations of laser architecture for supplying each of these beamlines from a central oscillator system were crucial in the design of the front end. Previous lasers have used bulk optics to split a single oscillator signal and report beams to multiple amplifier chains. A key idea in the current design is to replace bulk optic transport with fibers, eliminating large opto-mechanical subsystems. Another important concept is convenient pulse forming using low voltage integrated optic modulators. The integrated optic and fiber optic concepts resulted in the current pulse generation designs for NEF. An important advantage is that each of the beamlines can have an independently controlled temporal pulse shape, which provides for precise balance of instantaneous power on target.

  10. System for generating pluralities of optical pulses with predetermined frequencies in a temporally and spatially overlapped relationship

    DOEpatents

    Meyerhofer, D.D.; Schmid, A.W.; Chuang, Y.

    1992-03-10

    Ultrashort (pico second and shorter) laser pulses having components of different frequency which are overlapped coherently in space and with a predetermined constant relationship in time, are generated and may be used in applications where plural spectrally separate, time-synchronized pulses are needed as in wave-length resolved spectroscopy and spectral pump probe measurements for characterization of materials. A Chirped Pulse Amplifier (CPA), such as a regenerative amplifier, which provides amplified, high intensity pulses at the output thereof which have the same spatial intensity profile, is used to process a series of chirped pulses, each with a different central frequency (the desired frequencies contained in the output pulses). Each series of chirped pulses is obtained from a single chirped pulse by spectral windowing with a mask in a dispersive expansion stage ahead of the laser amplifier. The laser amplifier amplifies the pulses and provides output pulses with like spatial and temporal profiles. A compression stage then compresses the amplified pulses. All the individual pulses of different frequency, which originated in each single chirped pulse, are compressed and thereby coherently overlapped in space and time. The compressed pulses may be used for the foregoing purposes and other purposes wherien pulses having a plurality of discrete frequency components are required. 4 figs.

  11. System for generating pluralities of optical pulses with predetermined frequencies in a temporally and spatially overlapped relationship

    DOEpatents

    Meyerhofer, David D.; Schmid, Ansgar W.; Chuang, Yung-ho

    1992-01-01

    Ultra short (pico second and shorter) laser pulses having components of different frequency which are overlapped coherently in space and with a predetermined constant relationship in time, are generated and may be used in applications where plural spectrally separate, time-synchronized pulses are needed as in wave-length resolved spectroscopy and spectral pump probe measurements for characterization of materials. A Chirped Pulse Amplifier (CPA), such as a regenerative amplifier, which provides amplified, high intensity pulses at the output thereof which have the same spatial intensity profile, is used to process a series of chirped pulses, each with a different central frequency (the desired frequencies contained in the output pulses). Each series of chirped pulses is obtained from a single chirped pulse by spectral windowing with a mask in a dispersive expansion stage ahead of the laser amplifier. The laser amplifier amplifies the pulses and provides output pulses with like spatial and temporal profiles. A compression stage then compresses the amplified pulses. All the individual pulses of different frequency, which originated in each single chirped pulse, are compressed and thereby coherently overlapped in space and time. The compressed pulses may be used for the foregoing purposes and other purposes wherien pulses having a plurality of discrete frequency components are required.

  12. Integrated defense system overlaps as a disease model: with examples for multiple chemical sensitivity.

    PubMed Central

    Rowat, S C

    1998-01-01

    The central nervous, immune, and endocrine systems communicate through multiple common messengers. Over evolutionary time, what may be termed integrated defense system(s) (IDS) have developed to coordinate these communications for specific contexts; these include the stress response, acute-phase response, nonspecific immune response, immune response to antigen, kindling, tolerance, time-dependent sensitization, neurogenic switching, and traumatic dissociation (TD). These IDSs are described and their overlap is examined. Three models of disease production are generated: damage, in which IDSs function incorrectly; inadequate/inappropriate, in which IDS response is outstripped by a changing context; and evolving/learning, in which the IDS learned response to a context is deemed pathologic. Mechanisms of multiple chemical sensitivity (MCS) are developed from several IDS disease models. Model 1A is pesticide damage to the central nervous system, overlapping with body chemical burdens, TD, and chronic zinc deficiency; model 1B is benzene disruption of interleukin-1, overlapping with childhood developmental windows and hapten-antigenic spreading; and model 1C is autoimmunity to immunoglobulin-G (IgG), overlapping with spreading to other IgG-inducers, sudden spreading of inciters, and food-contaminating chemicals. Model 2A is chemical and stress overload, including comparison with the susceptibility/sensitization/triggering/spreading model; model 2B is genetic mercury allergy, overlapping with: heavy metals/zinc displacement and childhood/gestational mercury exposures; and model 3 is MCS as evolution and learning. Remarks are offered on current MCS research. Problems with clinical measurement are suggested on the basis of IDS models. Large-sample patient self-report epidemiology is described as an alternative or addition to clinical biomarker and animal testing. Images Figure 1 Figure 2 Figure 3 Figure 1 Figure 2 Figure 3 Figure 4 Figure 5 PMID:9539008

  13. MELTING OF GLASS BATCH - MODEL FOR MULTIPLE OVERLAPPING GAS-EVOLVING REACTIONS

    SciTech Connect

    KRUGER AA; PIERCE DA; POKORNY R; HRMA PR

    2012-02-07

    In this study, we present a model for the kinetics of multiple overlapping reactions. Mathematical representation of the kinetics of gas-evolving reactions is crucial for the modeling of the feed-to-glass conversion in a waste-glass melter. The model simulates multiple gas-evolving reactions that occur during heating of a high-alumina high-level waste melter feed. To obtain satisfactory kinetic parameters, we employed Kissinger's method combined with least-squares analysis. The power-law kinetics with variable reaction order sufficed for obtaining excellent agreement with measured thermogravimetric analysis data.

  14. Discussion of Discriminating Multiple Sources of SEF Overlapping in Time using SVD Method

    NASA Astrophysics Data System (ADS)

    Kim, Bong-Soo; Uchikawa, Yoshinori

    This paper describes a new method with singular value decomposition (SVD) for discriminating multiple sources in the brain overlapping in time. We carried out a 3-D vector measurement of somatosensory evoked field (SEF) with the electric stimulus to the right thumb, using a 3-D second-order gradiometer connected to 39-channel SQUIDs, which can detect the magnetic components perpendicular to the scalp (Br) and tangential to the scalp (Bθ, Bφ) simultaneously. The SVD method was applied to each spatio-temporal data, having two frequency ranges (1-40Hz, 15-40Hz), with the time window of 25ms and it was shifted every 2.5ms in analysis. Two dominant singular values were obtained for each of three components, respectively. It was found that magnetic field distribution with 15-40Hz was different to that of 1-40Hz at around 92ms latency corresponding to the SII activity overlapped in the SI activity. It was also confirmed a good agreement between isofield contour maps of measured magnetic field and theoretical maps calculated by signal subspaces with SVD analysis. We conclude this proposed method using dynamic SVD method with different frequency ranges is useful for discriminating multiple sources overlapping in time.

  15. On the Resolution Limit of Femtosecond Stimulated Raman Spectroscopy: Modelling Fifth-Order Signals with Overlapping Pulses.

    PubMed

    Fumero, Giuseppe; Batignani, Giovanni; Dorfman, Konstantin E; Mukamel, Shaul; Scopigno, Tullio

    2015-11-16

    Femtosecond stimulated Raman scattering (FSRS) spectroscopy is a powerful pump-probe technique that can track electronic and vibrational dynamics with high spectral and temporal resolution. The investigation of extremely short-lived species, however, implies deciphering complex signals and is ultimately hampered by unwanted nonlinear effects once the time resolution limit is approached and the pulses overlap temporally. Using the loop diagrams formalism we calculate the fifth-order response of a model system and address the limiting case where the relevant dynamics timescale is comparable to the pump-pulse duration and, consequently, the pump and the probe overlap temporally. We find that in this regime, additional diagrams that do not contribute for temporally well separated pulses need to be taken into account, giving rise to new time-dependent features, even in the absence of photoinduced dynamics and for negative delays. PMID:26387662

  16. Magnetic phases in Pt/Co/Pt films induced by single and multiple femtosecond laser pulses

    NASA Astrophysics Data System (ADS)

    Kisielewski, J.; Kurant, Z.; Sveklo, I.; Tekielak, M.; Wawro, A.; Maziewski, A.

    2016-05-01

    Ultrathin Pt/Co/Pt trilayers with initial in-plane magnetization were irradiated with femtosecond laser pulses. In this way, an irreversible structural modification was introduced, which resulted in the creation of numerous pulse fluence-dependent magnetic phases. This was particularly true with the out-of-plane magnetization state, which exhibited a submicrometer domain structure. This effect was studied in a broad range of pulse fluences up to the point of ablation of the metallic films. In addition to this single-pulse experiment, multiple exposure spots were also investigated, which exhibited an extended area of out-of-plane magnetization phases and a decreased damage threshold. Using a double exposure with partially overlapped spots, a two-dimensional diagram of the magnetic phases as a function of the two energy densities was built, which showed a strong inequality between the first and second incoming pulses.

  17. An experimental study of overlapping laser shock micro-adjustment using a pulsed Nd:YAG laser

    NASA Astrophysics Data System (ADS)

    Shen, Zongbao; Gu, Chunxing; Liu, Huixia; Wang, Xiao

    2013-12-01

    The influence of nanosecond laser pulses applied by the overlapping laser shock micro-adjustment with Nd:YAG laser operating at a wavelength of λ=1064 nm on aluminum has been investigated. Systematic study was carried out in the term of effects of various factors on the surface quality and the adjusting results, including the laser energies, the overlap rates and the number of impacts. According to the results, a fine surface quality can be obtained by adjusting the process parameters. Depending on the local plastic deformation of material area beneath each laser shock, both convex and concave curvatures can be generated. Furthermore, the investigation of the overlapping laser shock micro-adjustment effect on mechanical properties was evaluated based on the residual stress distribution. From an industrial point of view, the overlapping laser shock micro-adjustment experiments without absorbent coating were also carried out. Laser shock micro-adjustment is a new flexible adjustment method. Overlapping laser shock can adjust the curvature of specimen. The fine surface quality and compressive stresses can be obtained after laser shock. Both convex and concave curvatures can be generated using this flexible method.

  18. Ultrashort pulse propagation in multiple-grating fiber structures.

    PubMed

    Chen, L R; Benjamin, S D; Smith, P W; Sipe, J E; Juma, S

    1997-03-15

    We propose a multiple-grating fiber structure that decomposes an ultrashort broadband optical pulse simultaneously in both wavelength and time. As an initial demonstration, we used a transform-limited 1-ps Gaussian pulse centered at 1.55 mu;m as the ultrashort broadband input into a three-grating fiber structure and generated three output pulses separated in wavelength and time with good correlation between experimental results and simulations. This device structure can be used to generate a multiwavelength train of pulses for use in wavelength-division-multiplexed systems or to implement frequency-domain encoding of coherent pulses for optical code-division multiple access. PMID:18183215

  19. Nonresonant Multiple-Pulse Control of Molecular Motions in Liquid

    NASA Astrophysics Data System (ADS)

    Nikiforov, V. G.

    2015-09-01

    We propose the implementation of the multiple-pulse excitation for manipulation of the molecular contributions to the optically-heterodyne-detected optical-Kerr-effect. The key parameters controlling the specificity of the multiple-pulse excitation scenarios are the pulses durations, the delays between pulses, the relation between the pump pulses amplitudes and the pulses polarizations. We model the high-order optical responses and consider some principles of the scenarios construction. We show that it is possible to adjust the excitation scenario in such a way that the some responses can be removed from detected signal along with the enhancement of the interested response amplitude. The theoretical analysis and first experimental data reveal that the multiple-pulse excitation technique can be useful for the selective spectroscopy of the molecular vibrations and rotations in liquid.

  20. Controlling Test Overlap Rate in Automated Assembly of Multiple Equivalent Test Forms

    ERIC Educational Resources Information Center

    Lin, Chuan-Ju

    2010-01-01

    Assembling equivalent test forms with minimal test overlap across forms is important in ensuring test security. Chen and Lei (2009) suggested a exposure control technique to control test overlap-ordered item pooling on the fly based on the essence that test overlap rate--ordered item pooling for the first t examinees is a function of test overlap…

  1. Multiple pulse thresholds in live eyes for ultrashort laser pulses in the near infrared

    NASA Astrophysics Data System (ADS)

    Stolarski, David J.; Cain, Clarence P.; Toth, Cynthia A.; Noojin, Gary D.; Rockwell, Benjamin A.

    1999-06-01

    Damage thresholds using multiple laser pulses to produce minimum visible lesions (MVL) in rhesus monkey eyes are reported for near-infrared (800 nm) at 130 femtoseconds. Previous studies by our research group using single pulses in the near-infrared (1060 nm) have determined damage thresholds and retinal spot size dependence. We report the first multiple pulse damage thresholds using femtosecond pulses. MVL thresholds at 1 hour and 24 hours postexposure were determined for 1, 100 and 1,000 pulses and we compare these with other reported multiple pulse thresholds. These new data will be added to the databank for retinal MVL's as a function of pulse repetition rate for this pulsewidth and a comparison will be made with the ANSI standard for multiple pulse exposures. Our measurements show that the retinal ED50 threshold/pulse in the paramacula decreases for increasing number of pulses. The MVL-ED50 at the threshold/pulse decreased by a factor of 4 (0.55 (mu) J to 0.13 (mu) J/pulse) for an increase from 1 to 100 pulses.

  2. Extrinsic self-calibration of multiple cameras with non-overlapping views in vehicles

    NASA Astrophysics Data System (ADS)

    Pagel, Frank

    2014-03-01

    Due to decreasing sensor prices and increasing processing performance, the use of multiple cameras in vehicles becomes an attractive possibility for environment perception. This contribution focuses on non-overlapping multi-camera configurations on a mobile platform and its purely vision-based self-calibration as well as its restrictions. The usage of corresponding features between the cameras is very difficult to realize and likely to fail due to different appearances in different views and motion-dependent time delays. Instead, the hand-eye calibration (HEC) technique based on visual odometry is considered to solve this problem by exploiting the cameras motions. For that purpose, this contribution presents an approach to continuously calibrate cameras by making use of the so-called motion adjustment (MA) and an IEKF. Visual odometry in driving vehicles often struggles in estimating the relative magnitudes of the translational motion, which is crucial for the HEC. So, MA simultaneously estimates the extrinsic parameters up to scale as well as the relative motion magnitudes. Furthermore, the estimation process is embedded into a global fusion framework to benefit from the redundant information resulting from multiple cameras in order to yield more robust results. This paper presents results with simulated and real data.

  3. Analysis of multiple pulse NMR in solids

    NASA Technical Reports Server (NTRS)

    Rhim, W.-K.; Elleman, D. D.; Vaughan, R. W.

    1973-01-01

    The general problems associated with the removal of the effects of dipolar broadening from solid-state NMR spectra are analyzed. The effects of finite pulse width and H sub 1 inhomogeneity are shown to have limited the resolution of previous pulse cycles, and a new eight-pulse cycle designed to minimize these problems is discussed. Spectra for F-19 in CaF2 taken with this cycle are presented which show residual linewidth near 10 Hz. The feasibility of measuring proton chemical shift tensors is discussed.

  4. Analysis of multiple pulse NMR in solids. II

    NASA Technical Reports Server (NTRS)

    Rhim, W.-K.; Elleman, D. D.; Schreiber, L. B.; Vaughan, R. W.

    1974-01-01

    A systematic method, an extension of the average Hamiltonian formalism, is presented for calculating the effects of pulse errors and imperfections in the multiple pulse nuclear magnetic resonance experiments. Application of this method to account for effects of pulse nonidealities such as phase errors, phase transient effects, pulse size errors, and rf inhomogeneity is found to agree with experimental observation, and the results furnish a basis for understanding the complex couplings between the pulse errors and other interactions such as the dipolar and the chemical shift Hamiltonians.

  5. Multiple laser pulse ignition method and apparatus

    DOEpatents

    Early, J.W.

    1998-05-26

    Two or more laser light pulses with certain differing temporal lengths and peak pulse powers can be employed sequentially to regulate the rate and duration of laser energy delivery to fuel mixtures, thereby improving fuel ignition performance over a wide range of fuel parameters such as fuel/oxidizer ratios, fuel droplet size, number density and velocity within a fuel aerosol, and initial fuel temperatures. 18 figs.

  6. Multiple laser pulse ignition method and apparatus

    DOEpatents

    Early, James W.

    1998-01-01

    Two or more laser light pulses with certain differing temporal lengths and peak pulse powers can be employed sequentially to regulate the rate and duration of laser energy delivery to fuel mixtures, thereby improving fuel ignition performance over a wide range of fuel parameters such as fuel/oxidizer ratios, fuel droplet size, number density and velocity within a fuel aerosol, and initial fuel temperatures.

  7. System and process for pulsed multiple reaction monitoring

    DOEpatents

    Belov, Mikhail E

    2013-05-17

    A new pulsed multiple reaction monitoring process and system are disclosed that uses a pulsed ion injection mode for use in conjunction with triple-quadrupole instruments. The pulsed injection mode approach reduces background ion noise at the detector, increases amplitude of the ion signal, and includes a unity duty cycle that provides a significant sensitivity increase for reliable quantitation of proteins/peptides present at attomole levels in highly complex biological mixtures.

  8. Electric field in an AC dielectric barrier discharge overlapped with a nanosecond pulse discharge

    NASA Astrophysics Data System (ADS)

    Goldberg, Benjamin M.; Shkurenkov, Ivan; Adamovich, Igor V.; Lempert, Walter R.

    2016-08-01

    The effect of ns discharge pulses on the AC barrier discharge in hydrogen in plane-to-plane geometry is studied using time-resolved measurements of the electric field in the plasma. The AC discharge was operated at a pressure of 300 Torr at frequencies of 500 and 1750 Hz, with ns pulses generated when the AC voltage was near zero. The electric field vector is measured by ps four-wave mixing technique, which generates coherent IR signal proportional to the square of electric field. Absolute calibration was done using an electrostatic (sub-breakdown) field applied to the discharge electrodes, when no plasma was generated. The results are compared with one-dimensional kinetic modeling of the AC discharge and the nanosecond pulse discharge, predicting behavior of both individual micro-discharges and their cumulative effect on the electric field distribution in the electrode gap, using stochastic averaging based on the experimental micro-discharge temporal probability distribution during the AC period. Time evolution of the electric field in the AC discharge without ns pulses, controlled by a superposition of random micro-discharges, exhibits a nearly ‘flat top’ distribution with the maximum near breakdown threshold, reproduced quite well by kinetic modeling. Adding ns pulse discharges on top of the AC voltage waveform changes the AC discharge behavior in a dramatic way, inducing transition from random micro-discharges to a more regular, near-1D discharge. In this case, reproducible volumetric AC breakdown is produced at a well-defined moment after each ns pulse discharge. During the reproducible AC breakdown, the electric field in the plasma exhibits a sudden drop, which coincides in time with a well-defined current pulse. This trend is also predicted by the kinetic model. Analysis of kinetic modeling predictions shows that this effect is caused by large-volume ionization and neutralization of surface charges on the dielectrics by ns discharge pulses. The present

  9. Multiple pulse resonantly enhanced laser plasma wakefield acceleration

    SciTech Connect

    Corner, L.; Walczak, R.; Nevay, L. J.; Dann, S.; Hooker, S. M.; Bourgeois, N.; Cowley, J.

    2012-12-21

    We present an outline of experiments being conducted at Oxford University on multiple-pulse, resonantly-enhanced laser plasma wakefield acceleration. This method of laser plasma acceleration uses trains of optimally spaced low energy short pulses to drive plasma oscillations and may enable laser plasma accelerators to be driven by compact and efficient fibre laser sources operating at high repetition rates.

  10. Effectiveness of multiple pulses on flow index of electroporation

    NASA Astrophysics Data System (ADS)

    Morshed, Bashir I.; Shams, Maitham; Mussivand, Tofy

    2012-04-01

    Electroporation is the formation of reversible pores in cell membranes without rupturing the membrane using a high electric field. Electroporation is an important technique for various biomedical applications including drug delivery, gene transfection and therapeutic treatments. A microfluidic device was developed to investigate electroporation using single and multiple pulses. The device contained integrated electrodes inside microchannels. Stained cells were introduced inside the microchannels and excitation pulses were applied. Sequences of images were captured using an integrated-camera on an optical microscope in the bright-field mode. Stained pixel data from the sequences of images were extracted through image processing to detect and quantify electroporation. Flow Index of EP (FIEP) was computed from the normalized (wrt initial) stained pixel data. Multiple pulses increased FIEP when increased energy was delivered, but reduced FIEP when the same amount of energy was delivered. Mean FIEP using 20 V excitation for 1 pulse of 1 ms was 0.256, 10 pulses of 1 ms was 0.329 and 1 pulse of 10 ms was 0.422. These experimental results show that a single pulse is more effective to induce higher FIEP compared to multiple pulses. FIEP enables quantitative and systematic study towards optimization of pulse parameters for electroporation-based applications.

  11. Performance of Multiple Pulse Multiple Delay Modulated UWB Signals in a Multiple Access Indoor Wireless Channel

    SciTech Connect

    Nekoogar, F

    2003-06-12

    In this paper, the performance of a two user UWB multiple access (UWB-MA) system based on multiple-pulse multiple-delay (MPMD) modulation scheme in an indoor wireless channel is evaluated by computer simulations. The indoor multipath propagation channel model used in this study is based on the modified statistical Saleh-Valenzuela model proposed by Foerester and Li from Intel. The simulation results indicate that the multipath performance of MPMD modulated signals in a multiple access system outperforms the nonmultipath case as the number of autocorrelation function (ACF) sampling points increases for each user. This is an unusual but important result, since MPMD receiver exploits multipath phenomenon in indoor wireless channels to increase the BER performance, hence the transmission rate in a UWB-MA system.

  12. The multiple-pulse driver line on the OMEGA laser

    NASA Astrophysics Data System (ADS)

    Kosc, T. Z.; Kelly, J. H.; Hill, E. M.; Dorrer, C.; Waxer, L. J.; Donaldson, W. R.

    2015-02-01

    The multiple-pulse driver line (MPD) provides on-shot co-propagation of two separate pulse shapes in all 60 OMEGA beams at the Laboratory for Laser Energetics (LLE). The two co-propagating pulse shapes would typically be (1) a series of 100-ps "picket" pulses followed by (2) a longer square or shaped "drive" pulse. Smoothing by spectral dispersion (SSD), which increases the laser bandwidth, can be applied to either one of the two pulse shapes. Therefore, MPD allows for dynamic bandwidth reduction, where the bandwidth is applied only to the picket portion of a pulse shape. Since the use of SSD decreases the efficiency of frequency conversion from the IR to the UV, dynamic bandwidth reduction provides an increase in the drive-pulse energy. The design of the MPD required careful consideration of beam combination as well as the minimum pulse separation for two pulses generated by two separate sources. A new combined-pulse-shape diagnostic needed to be designed and installed after the last grating used for SSD. This new driver-line flexibility is built into the OMEGA front end as one component of the initiative to mitigate cross-beam energy transfer on target and to demonstrate hydro-equivalent ignition on the OMEGA laser at LLE.

  13. Super-Resolution Enhancement From Multiple Overlapping Images: A Fractional Area Technique

    NASA Astrophysics Data System (ADS)

    Michaels, Joshua A.

    With the availability of large quantities of relatively low-resolution data from several decades of space borne imaging, methods of creating an accurate, higher-resolution image from the multiple lower-resolution images (i.e. super-resolution), have been developed almost since such imagery has been around. The fractional-area super-resolution technique developed in this thesis has never before been documented. Satellite orbits, like Landsat, have a quantifiable variation, which means each image is not centered on the exact same spot more than once and the overlapping information from these multiple images may be used for super-resolution enhancement. By splitting a single initial pixel into many smaller, desired pixels, a relationship can be created between them using the ratio of the area within the initial pixel. The ideal goal for this technique is to obtain smaller pixels with exact values and no error, yielding a better potential result than those methods that yield interpolated pixel values with consequential loss of spatial resolution. A Fortran 95 program was developed to perform all calculations associated with the fractional-area super-resolution technique. The fractional areas are calculated using traditional trigonometry and coordinate geometry and Linear Algebra Package (LAPACK; Anderson et al., 1999) is used to solve for the higher-resolution pixel values. In order to demonstrate proof-of-concept, a synthetic dataset was created using the intrinsic Fortran random number generator and Adobe Illustrator CS4 (for geometry). To test the real-life application, digital pictures from a Sony DSC-S600 digital point-and-shoot camera with a tripod were taken of a large US geological map under fluorescent lighting. While the fractional-area super-resolution technique works in perfect synthetic conditions, it did not successfully produce a reasonable or consistent solution in the digital photograph enhancement test. The prohibitive amount of processing time (up to

  14. Pulsed thermography in multiple infrared spectral bands

    NASA Astrophysics Data System (ADS)

    Netzelmann, U.; Abuhamad, M.

    2010-03-01

    Spectrally resolved active thermography by flash pulse excitation was performed in four sub-bands of a mid-wave infrared camera using spectral filtering and in the full long-wave band of a second infrared camera. On zirconia thermal barrier coatings on steel and PVC blocks, spectrally dependent decay rates of the thermal contrast were found. The observed behaviour can be explained by the infrared spectra of the specimens.

  15. Laser Pulse-Stretching Using Multiple Optical Ring-Cavities

    NASA Technical Reports Server (NTRS)

    Kojima, Jun; Nguyen, Quang-Viet; Lee, Chi-Ming (Technical Monitor)

    2002-01-01

    We describe a simple and passive nanosecond-long (ns-long) laser 'pulse-stretcher' using multiple optical ring-cavities. We present a model of the pulse-stretching process for an arbitrary number of optical ring-cavities. Using the model, we optimize the design of a pulse-stretcher for use in a spontaneous Raman scattering excitation system that avoids laser-induced plasma spark problems. From the optimized design, we then experimentally demonstrate and verify the model with a 3-cavity pulse-stretcher system that converts a 1000 mJ, 8.4 ns-long input laser pulse into an approximately 75 ns-long (FWHM) output laser pulse with a peak power reduction of 0.10X, and an 83% efficiency.

  16. Impact of optical hard limiter on the performance of an optical overlapped-code division multiple access system

    NASA Astrophysics Data System (ADS)

    Inaty, Elie; Raad, Robert; Tablieh, Nicole

    2011-08-01

    Throughout this paper, a closed form expression of the multiple access interference (MAI) limited bit error rate (BER) is provided for the multiwavelength optical code-division multiple-access system when the system is working above the nominal transmission rate limit imposed by the passive encoding-decoding operation. This system is known in literature as the optical overlapped code division multiple access (OV-CDMA) system. A unified analytical framework is presented emphasizing the impact of optical hard limiter (OHL) on the BER performance of such a system. Results show that the performance of the OV-CDMA system may be highly improved when using OHL preprocessing at the receiver side.

  17. Boron distribution in silicon after multiple pulse excimer laser annealing

    SciTech Connect

    Monakhov, E.V.; Svensson, B.G.; Linnarsson, M.K.; La Magna, A.; Italia, M.; Privitera, V.; Fortunato, G.; Cuscuna, M.; Mariucci, L.

    2005-08-22

    We have studied B redistribution in Si after excimer laser annealing (ELA) with multiple laser pulses. B was implanted with energies of 1 and 10 keV and doses of 1x10{sup 14} and 1x10{sup 15} cm{sup -2}. ELA with the number of pulses from 1 to 100 was performed at room temperature and 450 deg. C in vacuum. Irrespective of the implantation parameters and the ELA conditions used, a pile-up in the B concentration is observed near the maximum melting depth after ten pulses of ELA. Moreover, a detailed study has revealed that B accumulates at the maximum melt depth gradually with the number of ELA pulses. Besides, an increase in the carrier concentration is observed at the maximum melt depth, suggesting electrical activity of the accumulated B. Formation of Si-B complexes and vacancy accumulation during multiple ELA are discussed as possible mechanisms for the B build-up.

  18. Multiple-Coil, Pulse-Induction Metal Detector

    NASA Technical Reports Server (NTRS)

    Lesky, Edward S.; Reid, Alan M.; Bushong, Wilton E.; Dickey, Duane P.

    1988-01-01

    Multiple-head, pulse-induction metal detector scans area of 72 feet squared with combination of eight detector heads, each 3 ft. square. Head includes large primary coil inducing current in smaller secondary coils. Array of eight heads enables searcher to cover large area quickly. Pulses applied to primary coil, induced in secondary coils measured to determine whether metal present within range of detector head. Detector designed for recovery of Space Shuttle debris.

  19. Multiple THz pulse generation with variable energy ratio and delay

    NASA Astrophysics Data System (ADS)

    Ungureanu, R. G.; Grigore, O. V.; Dinca, M. P.; Cojocaru, G. V.; Ursescu, D.; Dascalu, T.

    2015-04-01

    Two methods for multiple high energetic THz pulse generation by two-color filamentation in air with controllable energy ratio and delay ranging from one to hundreds of ps were investigated. In the first method the laser pulse is split into two inside the optical stretcher of a CPA laser system, the resulting consecutive filaments occur in the same region and allows the study of the influence of the first plasma filament on the THz emission of the delayed filament. Based on a polarization sensitive thin film beam splitter placed in front of a 45° mirror, the second method produces multiple parallel consecutive filaments. Above a certain total pump level the THz energy delivered by multiple pulses exceeds the value given by a single filament for the same pump energy, thereby overcoming the THz emission saturation of the single filament.

  20. Effect of the overlapping factor on the microstructure and mechanical properties of pulsed Nd:YAG laser welded Ti6Al4V sheets

    SciTech Connect

    Gao, Xiao-Long; Liu, Jing; Zhang, Lin-Jie Zhang, Jian-Xun

    2014-07-01

    The effect of the overlapping factor on the microstructures and mechanical properties of pulsed Nd:YAG laser welded Ti6Al4V alloy sheets was investigated by microstructural observations, microhardness tests, tensile tests and fatigue tests. A microstructural examination shows that by increasing the overlapping factor, the grains in the fusion zone become coarser, and the width of the heat affected zone increases. As overlapping factor increases, the width of region composed completely of martensite α′ and the secondary α phase in the heat affected zone increases, consequently the gradient of microstructure along the direction from the fusion zone to base metal decreases, so does the gradient of microhardness. The results of tensile and fatigue tests reveal that the joints made using medium overlapping factor exhibit better mechanical properties than those welded with low and high overlapping factors. Based on the experimental results, it can be stated that a sound weld of Ti6Al4V alloy can be obtained if an appropriate overlapping factor is used. - Highlights: • The weld quality of Ti6Al4V alloy under various overlapping factors was assessed. • Tensile and fatigue tests were conducted with as-welded specimen. • Localized strain across the weld was measured using DIC photogrammetry system. • A sound weld of Ti6Al4V alloy is obtained by using right overlapping factor.

  1. Temporal laser pulse manipulation using multiple optical ring-cavities

    NASA Technical Reports Server (NTRS)

    Nguyen, Quang-Viet (Inventor); Kojima, Jun (Inventor)

    2010-01-01

    An optical pulse stretcher and a mathematical algorithm for the detailed calculation of its design and performance is disclosed. The optical pulse stretcher has a plurality of optical cavities, having multiple optical reflectors such that an optical path length in each of the optical cavities is different. The optical pulse stretcher also has a plurality of beam splitters, each of which intercepts a portion of an input optical beam and diverts the portion into one of the plurality of optical cavities. The input optical beam is stretched and a power of an output beam is reduced after passing through the optical pulse stretcher and the placement of the plurality of optical cavities and beam splitters is optimized through a model that takes into account optical beam divergence and alignment in the pluralities of the optical cavities. The optical pulse stretcher system can also function as a high-repetition-rate (MHz) laser pulse generator, making it suitable for use as a stroboscopic light source for high speed ballistic projectile imaging studies, or it can be used for high speed flow diagnostics using a laser light sheet with digital particle imaging velocimetry. The optical pulse stretcher system can also be implemented using fiber optic components to realize a rugged and compact optical system that is alignment free and easy to use.

  2. Segmenting multiple overlapping objects via a hybrid active contour model incorporating shape priors: applications to digital pathology

    NASA Astrophysics Data System (ADS)

    Ali, Sahirzeeshan; Madabhushi, Anant

    2011-03-01

    Active contours and active shape models (ASM) have been widely employed in image segmentation. A major limitation of active contours, however, is in their (a) inability to resolve boundaries of intersecting objects and to (b) handle occlusion. Multiple overlapping objects are typically segmented out as a single object. On the other hand, ASMs are limited by point correspondence issues since object landmarks need to be identified across multiple objects for initial object alignment. ASMs are also are constrained in that they can usually only segment a single object in an image. In this paper, we present a novel synergistic boundary and region-based active contour model that incorporates shape priors in a level set formulation. We demonstrate an application of these synergistic active contour models using multiple level sets to segment nuclear and glandular structures on digitized histopathology images of breast and prostate biopsy specimens. Unlike previous related approaches, our model is able to resolve object overlap and separate occluded boundaries of multiple objects simultaneously. The energy functional of the active contour is comprised of three terms. The first term comprises the prior shape term, modeled on the object of interest, thereby constraining the deformation achievable by the active contour. The second term, a boundary based term detects object boundaries from image gradients. The third term drives the shape prior and the contour towards the object boundary based on region statistics. The results of qualitative and quantitative evaluation on 100 prostate and 14 breast cancer histology images for the task of detecting and segmenting nuclei, lymphocytes, and glands reveals that the model easily outperforms two state of the art segmentation schemes (Geodesic Active Contour (GAC) and Roussons shape based model) and resolves up to 92% of overlapping/occluded lymphocytes and nuclei on prostate and breast cancer histology images.

  3. Automatic detection of multiple and overlapping EP catheters in fluoroscopic sequences.

    PubMed

    Milletari, Fausto; Navab, Nassir; Fallavollita, Pascal

    2013-01-01

    We propose a method to perform automatic detection of electrophysiology (EP) catheters in fluoroscopic sequences. Our approach does not need any initialization, is completely automatic, and can detect an arbitrary number of catheters at the same time. The method is based on the usage of blob detectors and clustering in order to detect all catheter electrodes, overlapping or not, within the X-ray images. The proposed technique is validated on 1422 fluoroscopic images yielding a tip detection rate of 99.3% and mean distance of 0.5mm from manually labeled ground truth centroids for all electrodes. PMID:24505783

  4. Multiple comparison of trends in cancer rates taking into account overlapping cases*

    PubMed Central

    Martín, Nirian; Li, Yi

    2012-01-01

    Summary When analyzing trends in cancer rates, it is common to rely on the so-called Annual Percent Change (APC). For dealing with such a measure of trend, directly age-adjusted rates are usually considered. Classical methods such as pooled t-tests are often applied for comparing APCs of two groups of individuals in a simple way under independence assumption. In practice, it is quite common to find groups of interest for which the independence assumption fails because their regions or periods of time overlap. No one of the papers that deal this problem consider the case where more than two APCs are compared. In this work we propose a Wald-type test-statistic which is not difficult to compute once we provide the estimators of two or more APCs to be compared. These estimators are the minimum power divergence estimators that cover as special case those obtained by maximum likelihood. PMID:23060943

  5. Behavioural evidence for sex differences in the overlap between subtraction and multiplication.

    PubMed

    Pletzer, Belinda; Moeller, Korbinian; Scheuringer, Andrea; Domahs, Frank; Kerschbaum, Hubert H; Nuerk, Hans-Christoph

    2016-05-01

    The present study aims to identify factors that may influence the dissociability of number magnitude processing and arithmetic fact retrieval at the behavioural level. To that end, we assessed both subtraction and multiplication performance in a within-subject approach and evaluated the interdependence of unit-decade integration measures on the one hand as well as sex differences in the interdependence of performance measures on the other hand. We found that subtraction items requiring borrowing (e.g. 53-29 = 24, 3 < 9) are more error prone than subtraction items not requiring borrowing (e.g. 59-23 = 34, 9 > 3), thereby demonstrating a borrowing effect, which has been suggested as a measure of unit-decade integration in subtraction. Furthermore, we observed that multiplication items with decade-consistent distractors (e.g. 6 × 4 = 28 instead of 24) are more error prone that multiplication items with decade-inconsistent distractors (e.g. 6 × 4 = 30 instead of 24), thereby demonstrating a decade-consistency effect, which has been suggested as a measure of unit-decade integration in simple multiplication. However, the borrowing effect in subtraction was not correlated with the effect of decade consistency in simple multiplication in either men or women. This indicates that unit-decade integration arises from different systems in subtraction and multiplication. Nevertheless, men outperformed women not only in subtraction, but also in multiplication. Furthermore, subtraction and multiplication performance on correct solution probes were correlated in women, but unrelated in men. Thus, the view of differential systems for number magnitude processing and arithmetic fact retrieval may not be universal across sexes. PMID:26861245

  6. The Twenty-First Century Multiple Generation Workforce: Overlaps and Differences but Also Challenges and Benefits

    ERIC Educational Resources Information Center

    Helyer, Ruth; Lee, Dionne

    2012-01-01

    Purpose: The purpose of this paper is to explore the issues around a multiple generational workforce and more specifically, the challenges and benefits for education providers and employers. Design/methodology/approach: Reviewing research papers, analysing academic texts, interrogating market intelligence and contextualising case studies, the…

  7. Is there a pulse wave encephalopathy component to multiple sclerosis?

    PubMed

    Juurlink, Bernhard H J

    2015-01-01

    The dominant hypothesis in multiple sclerosis is that it is an autoimmune disease; however, there is considerable evidence that the immune attack on myelin may be secondary to a cytodegenerative event. Furthermore, the immune modulating therapies longest in clinical use, although modulating the frequency and severity of exacerbation, do not affect long-term progression towards disability. Clearly alternative perspectives on the etiology of multiple sclerosis are warranted. In this paper I outline the commonalities between idiopathic normal pressure hydrocephalus and multiple sclerosis. These include decreased intracranial compliance as evidenced by increased cerebrospinal fluid volume and velocity of cerebrospinal fluid flow through the cerebral aqueduct; increased ventricular volume; periventricular demyelination lesions; increase in size of Virchow-Robin spaces; presence of Hakim's triad comprised of locomotory disabilities, cognitive problems and bladder control problems. Furthermore, multiple sclerosis is associated with decreased arterial compliance. These are all suggestive that there is a pulse wave encephalopathy component to multiple sclerosis. There are enough resemblances between normal pressure hydrocephalus and multiple sclerosis to warrant further investigation. Whether decreases in intracranial compliance is a consequence of multiple sclerosis or is a causal factor is unknown. Effective therapies can only be developed when the etiology of the disease is understood. PMID:25760216

  8. Oscillation-Driven Spike-Timing Dependent Plasticity Allows Multiple Overlapping Pattern Recognition in Inhibitory Interneuron Networks.

    PubMed

    Garrido, Jesús A; Luque, Niceto R; Tolu, Silvia; D'Angelo, Egidio

    2016-08-01

    The majority of operations carried out by the brain require learning complex signal patterns for future recognition, retrieval and reuse. Although learning is thought to depend on multiple forms of long-term synaptic plasticity, the way this latter contributes to pattern recognition is still poorly understood. Here, we have used a simple model of afferent excitatory neurons and interneurons with lateral inhibition, reproducing a network topology found in many brain areas from the cerebellum to cortical columns. When endowed with spike-timing dependent plasticity (STDP) at the excitatory input synapses and at the inhibitory interneuron-interneuron synapses, the interneurons rapidly learned complex input patterns. Interestingly, induction of plasticity required that the network be entrained into theta-frequency band oscillations, setting the internal phase-reference required to drive STDP. Inhibitory plasticity effectively distributed multiple patterns among available interneurons, thus allowing the simultaneous detection of multiple overlapping patterns. The addition of plasticity in intrinsic excitability made the system more robust allowing self-adjustment and rescaling in response to a broad range of input patterns. The combination of plasticity in lateral inhibitory connections and homeostatic mechanisms in the inhibitory interneurons optimized mutual information (MI) transfer. The storage of multiple complex patterns in plastic interneuron networks could be critical for the generation of sparse representations of information in excitatory neuron populations falling under their control. PMID:27079422

  9. Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis

    PubMed Central

    Khankhanian, Pouya; Cozen, Wendy; Himmelstein, Daniel S; Madireddy, Lohith; Din, Lennox; van den Berg, Anke; Matsushita, Takuya; Glaser, Sally L; Moré, Jayaji M; Smedby, Karin E.; Baranzini, Sergio E; Mack, Thomas M; Lizée, Antoine; de Sanjosé, Silvia; Gourraud, Pierre-Antoine; Nieters, Alexandra; Hauser, Stephen L; Cocco, Pierluigi; Maynadié, Marc; Foretová, Lenka; Staines, Anthony; Delahaye-Sourdeix, Manon; Li, Dalin; Bhatia, Smita; Melbye, Mads; Onel, Kenan; Jarrett, Ruth; McKay, James D; Oksenberg, Jorge R; Hjalgrim, Henrik

    2016-01-01

    Background: Based on epidemiological commonalities, multiple sclerosis (MS) and Hodgkin lymphoma (HL), two clinically distinct conditions, have long been suspected to be aetiologically related. MS and HL occur in roughly the same age groups, both are associated with Epstein-Barr virus infection and ultraviolet (UV) light exposure, and they cluster mutually in families (though not in individuals). We speculated if in addition to sharing environmental risk factors, MS and HL were also genetically related. Using data from genome-wide association studies (GWAS) of 1816 HL patients, 9772 MS patients and 25 255 controls, we therefore investigated the genetic overlap between the two diseases. Methods: From among a common denominator of 404 K single nucleotide polymorphisms (SNPs) studied, we identified SNPs and human leukocyte antigen (HLA) alleles independently associated with both diseases. Next, we assessed the cumulative genome-wide effect of MS-associated SNPs on HL and of HL-associated SNPs on MS. To provide an interpretational frame of reference, we used data from published GWAS to create a genetic network of diseases within which we analysed proximity of HL and MS to autoimmune diseases and haematological and non-haematological malignancies. Results: SNP analyses revealed genome-wide overlap between HL and MS, most prominently in the HLA region. Polygenic HL risk scores explained 4.44% of HL risk (Nagelkerke R2), but also 2.36% of MS risk. Conversely, polygenic MS risk scores explained 8.08% of MS risk and 1.94% of HL risk. In the genetic disease network, HL was closer to autoimmune diseases than to solid cancers. Conclusions: HL displays considerable genetic overlap with MS and other autoimmune diseases. PMID:26971321

  10. Extraction of quadrature phase information from multiple pulse NMR signals

    NASA Technical Reports Server (NTRS)

    Rhim, W.-K.; Burum, D. P.; Vaughan, R. W.

    1976-01-01

    A multiple pulse sequence (8-pulse sequence) used for high-resolution solid state NMR is analyzed with regard to the information available from each of the four wide sampling windows. It is demonstrated that full quadrature phase information can be obtained using only a single phase detector and that, for the commonly encountered situation where the spectral width is much less than the folding frequency, the signals from the various windows can be combined easily using standard complex Fourier transform software. An improvement in the signal-to-noise ratio equal to the square root of 3 is obtained over either standard single or quadrature phase detection schemes. Procedures for correcting spectral distortions are presented.

  11. Bipolar radiofrequency ablation of benign thyroid nodules using a multiple overlapping shot technique in a 3-month follow-up.

    PubMed

    Kohlhase, Konstantin David; Korkusuz, Yücel; Gröner, Daniel; Erbelding, Christian; Happel, Christian; Luboldt, Wolfgang; Grünwald, Frank

    2016-08-01

    Purpose The aim of this study was to evaluate the decrease of benign thyroid nodules after bipolar radiofrequency ablation (RFA) in a 3-month follow-up using a multiple overlapping shot technique ('MOST'). Methods A total of 18 patients with 20 symptomatic benign thyroid nodules (17 cold nodules, 3 hyperfunctioning nodules) were treated in one single session by bipolar RFA. Bipolar ablation was performed using MOST. The nodule volumes were measured prior to ablation and 3 months after the procedure using ultrasound. The population consisted of either solid (>80% solid tissue within the volume of interest), complex, or cystic nodules (<20% solid tissue within the volume of interest). Results Bipolar RFA resulted in a highly significant (p < 0.0001) decrease of nodule volume (ΔV), median 5.3 mL (range 0.13-43.1 mL), corresponding to a relative reduction in mean of 56 ± 17.9%. Median initial volume was 8 mL (range 0.48-62 mL); 3 months after ablation a median volume of 2.3 mL (range 0.3-32 mL) was measured. Nodule growth ≥50% occurred in 70% (14 nodules). At the follow-up no complications such as infections, persisting pain, nerve injuries or immunogen stimulation occurred. Patients with cold nodules (15) remained euthyroid, with hyperfunctioning nodules either euthyroid (2) or latent hypofunctional (1). Conclusion The use of bipolar RFA is an effective, safe and suitable thermoablative technique to treat benign thyroid nodules. Combined with the multiple overlapping shot technique it allows sufficient ablation. PMID:27126512

  12. Dubowitz syndrome is a complex comprised of multiple, genetically distinct and phenotypically overlapping disorders.

    PubMed

    Stewart, Douglas R; Pemov, Alexander; Johnston, Jennifer J; Sapp, Julie C; Yeager, Meredith; He, Ji; Boland, Joseph F; Burdett, Laurie; Brown, Christina; Gatti, Richard A; Alter, Blanche P; Biesecker, Leslie G; Savage, Sharon A

    2014-01-01

    Dubowitz syndrome is a rare disorder characterized by multiple congenital anomalies, cognitive delay, growth failure, an immune defect, and an increased risk of blood dyscrasia and malignancy. There is considerable phenotypic variability, suggesting genetic heterogeneity. We clinically characterized and performed exome sequencing and high-density array SNP genotyping on three individuals with Dubowitz syndrome, including a pair of previously-described siblings (Patients 1 and 2, brother and sister) and an unpublished patient (Patient 3). Given the siblings' history of bone marrow abnormalities, we also evaluated telomere length and performed radiosensitivity assays. In the siblings, exome sequencing identified compound heterozygosity for a known rare nonsense substitution in the nuclear ligase gene LIG4 (rs104894419, NM_002312.3:c.2440C>T) that predicts p.Arg814X (MAF:0.0002) and an NM_002312.3:c.613delT variant that predicts a p.Ser205Leufs*29 frameshift. The frameshift mutation has not been reported in 1000 Genomes, ESP, or ClinSeq. These LIG4 mutations were previously reported in the sibling sister; her brother had not been previously tested. Western blotting showed an absence of a ligase IV band in both siblings. In the third patient, array SNP genotyping revealed a de novo ∼ 3.89 Mb interstitial deletion at chromosome 17q24.2 (chr 17:62,068,463-65,963,102, hg18), which spanned the known Carney complex gene PRKAR1A. In all three patients, a median lymphocyte telomere length of ≤ 1st centile was observed and radiosensitivity assays showed increased sensitivity to ionizing radiation. Our work suggests that, in addition to dyskeratosis congenita, LIG4 and 17q24.2 syndromes also feature shortened telomeres; to confirm this, telomere length testing should be considered in both disorders. Taken together, our work and other reports on Dubowitz syndrome, as currently recognized, suggest that it is not a unitary entity but instead a collection of phenotypically

  13. Dubowitz Syndrome Is a Complex Comprised of Multiple, Genetically Distinct and Phenotypically Overlapping Disorders

    PubMed Central

    Stewart, Douglas R.; Pemov, Alexander; Johnston, Jennifer J.; Sapp, Julie C.; Yeager, Meredith; He, Ji; Boland, Joseph F.; Burdett, Laurie; Brown, Christina; Gatti, Richard A.; Alter, Blanche P.; Biesecker, Leslie G.; Savage, Sharon A.

    2014-01-01

    Dubowitz syndrome is a rare disorder characterized by multiple congenital anomalies, cognitive delay, growth failure, an immune defect, and an increased risk of blood dyscrasia and malignancy. There is considerable phenotypic variability, suggesting genetic heterogeneity. We clinically characterized and performed exome sequencing and high-density array SNP genotyping on three individuals with Dubowitz syndrome, including a pair of previously-described siblings (Patients 1 and 2, brother and sister) and an unpublished patient (Patient 3). Given the siblings' history of bone marrow abnormalities, we also evaluated telomere length and performed radiosensitivity assays. In the siblings, exome sequencing identified compound heterozygosity for a known rare nonsense substitution in the nuclear ligase gene LIG4 (rs104894419, NM_002312.3:c.2440C>T) that predicts p.Arg814X (MAF:0.0002) and an NM_002312.3:c.613delT variant that predicts a p.Ser205Leufs*29 frameshift. The frameshift mutation has not been reported in 1000 Genomes, ESP, or ClinSeq. These LIG4 mutations were previously reported in the sibling sister; her brother had not been previously tested. Western blotting showed an absence of a ligase IV band in both siblings. In the third patient, array SNP genotyping revealed a de novo ∼3.89 Mb interstitial deletion at chromosome 17q24.2 (chr 17:62,068,463–65,963,102, hg18), which spanned the known Carney complex gene PRKAR1A. In all three patients, a median lymphocyte telomere length of ≤1st centile was observed and radiosensitivity assays showed increased sensitivity to ionizing radiation. Our work suggests that, in addition to dyskeratosis congenita, LIG4 and 17q24.2 syndromes also feature shortened telomeres; to confirm this, telomere length testing should be considered in both disorders. Taken together, our work and other reports on Dubowitz syndrome, as currently recognized, suggest that it is not a unitary entity but instead a collection of phenotypically

  14. Estimating self-clutter of the multiple-pulse technique

    NASA Astrophysics Data System (ADS)

    Reimer, A. S.; Hussey, G. C.

    2015-07-01

    Autocorrelation function (ACF) estimates from voltage data measured by high-frequency ionospheric radar systems that utilize the multiple-pulse technique of Farley (1972) are susceptible to interference from self-clutter. Self-clutter is caused by simultaneous returns from multiple transmitted pulses echoing from unwanted, or ambiguous ranges. Without accurate estimates of self-clutter it is impossible to account for all the uncertainty in estimates of the radar ACF. Voltage- and power-based self-clutter estimators are presented and evaluated using a modified version of the radar data simulator of Ribeiro et al. (2013a) and data from the Super Dual Auroral Radar Network (SuperDARN). It is shown that self-clutter caused by ambiguous ranges filled with ground scatter can be accurately estimated using a voltage-based self-clutter estimator but that for ionospheric origin self-clutter a maximal estimator must be used. Two maximal self-clutter estimators are discussed and verified using the radar data simulator. A discussion of the application of the self-clutter estimator as it is applied to ACFs obtained with Saskatoon SuperDARN radar is also presented.

  15. Reconstructing surface wave profiles from reflected acoustic pulses using multiple receivers.

    PubMed

    Walstead, Sean P; Deane, Grant B

    2014-08-01

    Surface wave shapes are determined by analyzing underwater reflected acoustic signals collected at multiple receivers. The transmitted signals are of nominal frequency 300 kHz and are reflected off surface gravity waves that are paddle-generated in a wave tank. An inverse processing algorithm reconstructs 50 surface wave shapes over a length span of 2.10 m. The inverse scheme uses a broadband forward scattering model based on Kirchhoff's diffraction formula to determine wave shapes. The surface reconstruction algorithm is self-starting in that source and receiver geometry and initial estimates of wave shape are determined from the same acoustic signals used in the inverse processing. A high speed camera provides ground-truth measurements of the surface wave field for comparison with the acoustically derived surface waves. Within Fresnel zone regions the statistical confidence of the inversely optimized surface profile exceeds that of the camera profile. Reconstructed surfaces are accurate to a resolution of about a quarter-wavelength of the acoustic pulse only within Fresnel zones associated with each source and receiver pair. Multiple isolated Fresnel zones from multiple receivers extend the spatial extent of accurate surface reconstruction while overlapping Fresnel zones increase confidence in the optimized profiles there. PMID:25096095

  16. The auditory and non-auditory brain areas involved in tinnitus. An emergent property of multiple parallel overlapping subnetworks.

    PubMed

    Vanneste, Sven; De Ridder, Dirk

    2012-01-01

    Tinnitus is the perception of a sound in the absence of an external sound source. It is characterized by sensory components such as the perceived loudness, the lateralization, the tinnitus type (pure tone, noise-like) and associated emotional components, such as distress and mood changes. Source localization of quantitative electroencephalography (qEEG) data demonstrate the involvement of auditory brain areas as well as several non-auditory brain areas such as the anterior cingulate cortex (dorsal and subgenual), auditory cortex (primary and secondary), dorsal lateral prefrontal cortex, insula, supplementary motor area, orbitofrontal cortex (including the inferior frontal gyrus), parahippocampus, posterior cingulate cortex and the precuneus, in different aspects of tinnitus. Explaining these non-auditory brain areas as constituents of separable subnetworks, each reflecting a specific aspect of the tinnitus percept increases the explanatory power of the non-auditory brain areas involvement in tinnitus. Thus, the unified percept of tinnitus can be considered an emergent property of multiple parallel dynamically changing and partially overlapping subnetworks, each with a specific spontaneous oscillatory pattern and functional connectivity signature. PMID:22586375

  17. CLAVATA1 Dominant-Negative Alleles Reveal Functional Overlap between Multiple Receptor Kinases That Regulate Meristem and Organ Development

    PubMed Central

    Diévart, Anne; Dalal, Monica; Tax, Frans E.; Lacey, Alexzandria D.; Huttly, Alison; Li, Jianming; Clark, Steven E.

    2003-01-01

    The CLAVATA1 (CLV1) receptor kinase controls stem cell number and differentiation at the Arabidopsis shoot and flower meristems. Other components of the CLV1 signaling pathway include the secreted putative ligand CLV3 and the receptor-like protein CLV2. We report evidence indicating that all intermediate and strong clv1 alleles are dominant negative and likely interfere with the activity of unknown receptor kinase(s) that have functional overlap with CLV1. clv1 dominant-negative alleles show major differences from dominant-negative alleles characterized to date in animal receptor kinase signaling systems, including the lack of a dominant-negative effect of kinase domain truncation and the ability of missense mutations in the extracellular domain to act in a dominant-negative manner. We analyzed chimeric receptor kinases by fusing CLV1 and BRASSINOSTEROID INSENSITIVE1 (BRI1) coding sequences and expressing these in clv1 null backgrounds. Constructs containing the CLV1 extracellular domain and the BRI1 kinase domain were strongly dominant negative in the regulation of meristem development. Furthermore, we show that CLV1 expressed within the pedicel can partially replace the function of the ERECTA receptor kinase. We propose the presence of multiple receptors that regulate meristem development in a functionally related manner whose interactions are driven by the extracellular domains and whose activation requires the kinase domain. PMID:12724544

  18. Syntenic block overlap multiplicities with a panel of reference genomes provide a signature of ancient polyploidization events

    PubMed Central

    2015-01-01

    Background Following whole genome duplication (WGD), there is a compact distribution of gene similarities within the genome reflecting duplicate pairs of all the genes in the genome. With time, the distribution broadens and loses volume due to variable decay of duplicate gene similarity and to the process of duplicate gene loss. If there are two WGD, the older one becomes so reduced and broad that it merges with the tail of the distributions resulting from more recent events, and it becomes difficult to distinguish them. The goal of this paper is to advance statistical methods of identifying, or at least counting, the WGD events in the lineage of a given genome. Methods For a set of 15 angiosperm genomes, we analyze all 15 × 14 = 210 ordered pairs of target genome versus reference genome, using SynMap to find syntenic blocks. We consider all sets of B ≥ 2 syntenic blocks in the target genome that overlap in the reference genome as evidence of WGD activity in the target, whether it be one event or several. We hypothesize that in fitting an exponential function to the tail of the empirical distribution f (B) of block multiplicities, the size of the exponent will reflect the amount of WGD in the history of the target genome. Results By amalgamating the results from all reference genomes, a range of values of SynMap parameters, and alternative cutoff points for the tail, we find a clear pattern whereby multiple-WGD core eudicots have the smallest (negative) exponents, followed by core eudicots with only the single "γ" triplication in their history, followed by a non-core eudicot with a single WGD, followed by the monocots, with a basal angiosperm, the WGD-free Amborella having the largest exponent. Conclusion The hypothesis that the exponent of the fit to the tail of the multiplicity distribution is a signature of the amount of WGD is verified, but there is also a clear complicating factor in the monocot clade, where a history of multiple WGD is not reflected in a

  19. Analysis of multiple pulse NMR in solids. III

    NASA Technical Reports Server (NTRS)

    Burum, D. P.; Rhim, W. K.

    1979-01-01

    The paper introduces principles which greatly simplify the process of designing and analyzing compound pulse cycles. These principles are demonstrated by applying them to the design and analysis of several cycles, including a 52-pulse cycle; this pulse cycle combines six different REV-8 cycles and has substantially more resolving power than previously available techniques. Also, a new 24-pulse cycle is introduced which combines three different REV-8 cycles and has a resolving ability equivalent to that of the 52-pulse cycle. The principle of pulse-cycle decoupling provides a method for systematically combining pulse groups into compound cycles in order to achieve enhanced performance. This method is illustrated by a logical development from the two-pulse solid echo sequence to the WAHUHA (Waugh et al., 1968), the REV-8, and the new 24-pulse and 52-pulse cycles, along with the 14-pulse and 12-pulse cycles. Proton chemical shift tensor components for several organic solids, measured by using the 52-pulse cycle, are reported without detailed discussion.

  20. Controlling electron injection in laser plasma accelerators using multiple pulses

    SciTech Connect

    Matlis, N. H.; Geddes, C. G. R.; Plateau, G. R.; Esarey, E.; Schroeder, C.; Bruhwiler, D.; Cormier-Michel, E.; Chen, M.; Yu, L.; Leemans, W. P.

    2012-12-21

    Use of counter-propagating pulses to control electron injection in laser-plasma accelerators promises to be an important ingredient in the development of stable devices. We discuss the colliding pulse scheme and associated diagnostics.

  1. Palliation of malignant rectal obstruction from invasive prostate cancer with multiple overlapping self-expanding metal stents.

    PubMed

    Smith, Aja S; Cole, Matthew; Vega, Kenneth J; Munoz, Juan Carlos

    2009-12-01

    Self-expandable metal stents (SEMS) are used for colonic neoplastic and extracolonic metastatic obstruction relief. Limited data exists on their use for locally invasive prostate cancer. We describe a unique approach using overlapping SEMS to alleviate a rectosigmoid obstruction from locally invasive prostate cancer. A patient with locally advanced prostate cancer presented with obstipation and lymphedema. Placement of overlapping rectosigmoid SEMS was performed, relieving the visualized rectosigmoid obstruction. PMID:20016435

  2. High pulse repetition frequency, multiple wavelength, pulsed CO(2) lidar system for atmospheric transmission and target reflectance measurements.

    PubMed

    Ben-David, A; Emery, S L; Gotoff, S W; D'Amico, F M

    1992-07-20

    A multiple wavelength, pulsed CO(2) lidar system operating at a pulse repetition frequency of 200 Hz and permitting the random selection of CO(2) laser wavelengths for each laser pulse is presented. This system was employed to measure target reflectance and atmospheric transmission by using laser pulse bursts consisting of groups with as many as 16 different wavelengths at a repetition rate of 12 Hz. The wavelength tuning mechanism of the transversely excited atmospheric laser consists of a stationary grating and a flat mirror controlled by a galvanometer. Multiple wavelength, differential absorption lidar (DIAL) measurements reduce the effects of differential target reflectance and molecular absorption interference. Examples of multiwavelength DIAL detection for ammonia and water vapor show the dynamic interaction between these two trace gases. Target reflectance measurements for maple trees in winter and autumn are presented. PMID:20725406

  3. Multiple noise-like pulsing of a figure-eight fibre laser

    NASA Astrophysics Data System (ADS)

    Pottiez, O.; Ibarra-Escamilla, B.; Kuzin, E. A.; Hernández-García, J. C.; González-García, A.; Durán-Sánchez, M.

    2014-01-01

    In this work we study multiple noise-like pulse generation in a 320 m long passively mode-locked erbium-doped figure-eight fibre laser in the normal net dispersion regime. The nonlinear optical loop mirror (NOLM) that is used as a mode locker operates through polarization asymmetry, which allows us to control its switching power by birefringence adjustments at the NOLM input, using a half-wave retarder (HWR). Over some range of the HWR orientation, a single noise-like pulse is observed in the cavity. Its peak power is adjustable as it remains clamped to the variable switching power, and its duration varies inversely between ˜5 and ˜22 ps. Beyond the HWR position, corresponding to the longest duration, the pulse splits into several noise-like pulses. These multiple pulses usually present a walkoff, however they can be synchronized through slight birefringence adjustments, although they are not evenly spaced in time. Up to 12 simultaneous noise-like pulses were observed experimentally, with a duration of ˜2 ns. Multiple pulsing and synchronization of the pulses are interpreted in terms of mechanisms of interaction between pulses. Multiple pulsing appears to be indirectly related to the peak power limiting effect of the NOLM.

  4. [Multiple autoimmune syndrome. Reynolds-syndrome (acral scleroderma, primary biliary cirrhosis, Sjögren syndrome) associated with the lupus erythematosus/lichen planus overlap syndrome].

    PubMed

    Müller, F B; Groth, W; Mahrle, G

    2004-05-01

    A female patient presented with acral scleroderma, Sjögren syndrome, antibodies specific for primary biliary cirrhosis and clinical as well as histological features of lichen planus and subacute lupus erythematosus. In addition an euthyroid Hashimoto thyroiditis was found. Her findings correspond to type II of the multiple autoimmune syndrome (MAS) and can be described as an association of Reynolds syndrome and the lupus erythematosus/lichen planus-overlap syndrome. PMID:15138654

  5. Double-Pulsed 2-micron Laser Transmitter for Multiple Lidar Applications

    NASA Technical Reports Server (NTRS)

    Singh, Upendra N.; Yu, Jirong

    2002-01-01

    A high energy double-pulsed Ho:Tm:YLF 2-micron laser amplifier has been demonstrated. 600 mJ per pulse pair under Q-switch operation is achieved with the gain of 4.4. This solid-state laser source can be used as lidar transmitter for multiple lidar applications such as coherent wind and carbon dioxide measurements.

  6. Multiple Filamentation of Laser Pulses in a Glass

    NASA Astrophysics Data System (ADS)

    Apeksimov, D. V.; Bukin, O. A.; Golik, S. S.; Zemlyanov, A. A.; Iglakova, A. N.; Kabanov, A. M.; Kuchinskaya, O. I.; Matvienko, G. G.; Oshlakov, V. K.; Petrov, A. V.; Sokolova, E. B.

    2016-03-01

    Results are presented of experiments on investigation of the spatial characteristics of multi-filamentation region of giga- and terawatt pulses of a Ti:sapphire laser in a glass. Dependences are obtained of the coordinate of the beginning of filamentation region, number of filaments, their distribution along the laser beam axis, and length of filaments on the pulse power. It is shown that with increasing radiation power, the number of filaments in the multi-filamentation region decreases, whereas the filament diameter has a quasiconstant value for all powers realized in the experiments. It is shown that as a certain power of the laser pulse with Gauss energy density distribution is reached, the filamentation region acquires the shape of a hollow cone with apex directed toward the radiation source.

  7. Range and Velocity Estimation of Moving Targets Using Multiple Stepped-frequency Pulse Trains

    PubMed Central

    Li, Gang; Meng, Huadong; Xia, Xiang-Gen; Peng, Ying-Ning

    2008-01-01

    Range and velocity estimation of moving targets using conventional stepped-frequency pulse radar may suffer from the range-Doppler coupling and the phase wrapping. To overcome these problems, this paper presents a new radar waveform named multiple stepped-frequency pulse trains and proposes a new algorithm. It is shown that by using multiple stepped-frequency pulse trains and the robust phase unwrapping theorem (RPUT), both of the range-Doppler coupling and the phase wrapping can be robustly resolved, and accordingly, the range and the velocity of a moving target can be accurately estimated.

  8. Pulse Jet Mixer Overblow Testing for Assessment of Loadings During Multiple Overblows

    SciTech Connect

    Pfund, David M.; Bontha, Jagannadha R.; Michener, Thomas E.; Nigl, Franz; Yokuda, Satoru T.; Leigh, Richard J.; Golovich, Elizabeth C.; Baumann, Aaron W.; Kurath, Dean E.; Hoza, Mark; Combs, William H.; Fort, James A.; Bredt, Ofelia P.

    2009-07-20

    The U.S. Department of Energy (DOE) Office of River Protection’s Waste Treatment Plant (WTP) is being designed and built to pretreat and then vitrify a large portion of the wastes in Hanford’s 177 underground waste storage tanks. The WTP consists of three primary facilities: pretreatment, low-activity waste (LAW) vitrification, and high-level waste (HLW) vitrification. The pretreatment facility will receive waste feed from the Hanford tank farms and separate it into 1) a high-volume, low-activity liquid stream stripped of most solids and radionuclides and 2) a much smaller volume of HLW slurry containing most of the solids and most of the radioactivity. Many of the vessels in the pretreatment facility will contain pulse jet mixers (PJMs) that will provide some or all of the mixing in the vessels. This technology was selected for use in so-called “black cell” regions of the WTP, where maintenance capability will not be available for the operating life of the WTP. PJM technology was selected for use in these regions because it has no moving mechanical parts that require maintenance. The vessels with the most concentrated slurries will also be mixed with air spargers and/or steady jets in addition to the mixing provided by the PJMs. This report contains the results of single and multiple PJM overblow tests conducted in a large, ~13 ft-diameter × 15-ft-tall tank located in the high bay of the Pacific Northwest National Laboratory (PNNL) 336 Building test facility. These single and multiple PJM overblow tests were conducted using water and a clay simulant to bound the lower and upper rheological properties of the waste streams anticipated to be processed in the WTP. Hydrodynamic pressures were measured at a number of locations in the test vessel using an array of nine pressure sensors and four hydrophones. These measurements were made under normal and limiting vessel operating conditions (i.e., maximum PJM fluid emptying velocity, maximum and minimum vessel

  9. Pulse Jet Mixer Overblow Testing for Assessment of Loadings During Multiple Overblows

    SciTech Connect

    Pfund, David M.; Bontha, Jagannadha R.; Michener, Thomas E.; Nigl, Franz; Yokuda, Satoru T.; Leigh, Richard J.; Golovich, Elizabeth C.; Baumann, Aaron W.; Kurath, Dean E.; Hoza, Mark; Combs, William H.; Fort, James A.; Bredt, Ofelia P.

    2008-03-03

    The U.S. Department of Energy (DOE) Office of River Protection’s Waste Treatment Plant (WTP) is being designed and built to pretreat and then vitrify a large portion of the wastes in Hanford’s 177 underground waste storage tanks. The WTP consists of three primary facilities: pretreatment, low-activity waste (LAW) vitrification, and high-level waste (HLW) vitrification. The pretreatment facility will receive waste feed from the Hanford tank farms and separate it into 1) a high-volume, low-activity liquid stream stripped of most solids and radionuclides and 2) a much smaller volume of HLW slurry containing most of the solids and most of the radioactivity. Many of the vessels in the pretreatment facility will contain pulse jet mixers (PJMs) that will provide some or all of the mixing in the vessels. This technology was selected for use in so-called “black cell” regions of the WTP, where maintenance capability will not be available for the operating life of the WTP. PJM technology was selected for use in these regions because it has no moving mechanical parts that require maintenance. The vessels with the most concentrated slurries will also be mixed with air spargers and/or steady jets in addition to the mixing provided by the PJMs. This report contains the results of single and multiple PJM overblow tests conducted in a large, ~13 ft-diameter × 15-ft-tall tank located in the high bay of the Pacific Northwest National Laboratory (PNNL) 336 Building test facility. These single and multiple PJM overblow tests were conducted using water and a clay simulant to bound the lower and upper rheological properties of the waste streams anticipated to be processed in the WTP. Hydrodynamic pressures were measured at a number of locations in the test vessel using an array of nine pressure sensors and four hydrophones. These measurements were made under normal and limiting vessel operating conditions (i.e., maximum PJM fluid emptying velocity, maximum and minimum vessel

  10. Design and operation of the multiple-pulse driver line on the OMEGA laser

    NASA Astrophysics Data System (ADS)

    Kosc, T. Z.; Kelly, J. H.; Hill, E. M.; Waxer, L. J.

    2016-05-01

    The multiple-pulse driver line (MPD) provides on-shot co-propagation of two separately generated pulse shapes in all 60 OMEGA beams at the Laboratory for Laser Energetics. Smoothing by spectral dispersion (SSD), which increases the laser bandwidth, can be applied to either one of the two pulse shapes, thereby enabling dynamic bandwidth reduction. The design of the MPD required careful consideration of beam combination as well as the minimum pulse separation for two pulses generated by two separate seed sources. A new combined-pulse-shape diagnostic needed to be designed and installed after the last SSD grating. The capability of MPD to reduce dynamic bandwidth has been used on a series of campaigns on OMEGA and the performance data are presented.

  11. Versatile patterns of multiple rectangular noise-like pulses in a fiber laser.

    PubMed

    Huang, Yu-Qi; Qi, You-Li; Luo, Zhi-Chao; Luo, Ai-Ping; Xu, Wen-Cheng

    2016-04-01

    We report on the generation of versatile patterns of multiple rectangular noise-like pulses (NLPs) in a fiber laser mode-locked by nonlinear amplifying loop mirror (NALM). Benefiting from the strengthened nonlinear effect of a segment of highly nonlinear fiber (HNLF) in the loop, multiple rectangular NLPs with various patterns are formed depending on the cavity parameter settings. In particular, the multiple rectangular NLPs could possess unequal packet durations, which is different from the conventional multi-soliton patterns. The experimental results contribute to further understanding the characteristics of the rectangular NLP and the dynamics of multi-pulse patterns. PMID:27137025

  12. Alignment of asymmetric-top molecules using multiple-pulse trains

    SciTech Connect

    Pabst, Stefan; Santra, Robin

    2010-06-15

    We theoretically analyze the effectiveness of multiple-pulse laser alignment methods for asymmetric-top molecules. As an example, we choose SO{sub 2} and investigate the alignment dynamics induced by two different sequences, each consisting of four identical laser pulses. Each sequence differs only in the time delay between the pulses. Equally spaced pulses matching the alignment revival of the symmetrized SO{sub 2} rotor model are exploited in the first sequence. The pulse separations in the second sequence are short compared to the rotation dynamics of the molecule and monotonically increase the degree of alignment until the maximum alignment is reached. We point out the significant differences between the alignment dynamics of SO{sub 2} treated as an asymmetric-top and a symmetric-top rotor, respectively. We also explain why the fast sequence of laser pulses creates considerably stronger one-dimensional molecular alignment for asymmetric-top molecules. In addition, we show that multiple-pulse trains with elliptically polarized pulses do not enhance one-dimensional alignment or create three-dimensional alignment.

  13. Alignment of asymetric-top molecules using multiple-pulse trains.

    SciTech Connect

    Pabst, S.; Santra, R.; X-Ray Science Division; Univ. Erlangen-Nuremberg; Univ. of Chicago

    2010-06-07

    We theoretically analyze the effectiveness of multiple-pulse laser alignment methods for asymmetric-top molecules. As an example, we choose SO2 and investigate the alignment dynamics induced by two different sequences, each consisting of four identical laser pulses. Each sequence differs only in the time delay between the pulses. Equally spaced pulses matching the alignment revival of the symmetrized SO2 rotor model are exploited in the first sequence. The pulse separations in the second sequence are short compared to the rotation dynamics of the molecule and monotonically increase the degree of alignment until the maximum alignment is reached. We point out the significant differences between the alignment dynamics of SO2 treated as an asymmetric-top and a symmetric-top rotor, respectively. We also explain why the fast sequence of laser pulses creates considerably stronger one-dimensional molecular alignment for asymmetric-top molecules. In addition, we show that multiple-pulse trains with elliptically polarized pulses do not enhance one-dimensional alignment or create three-dimensional alignment.

  14. Temperature increase of ex vivo corneas from multiple 2.01-micron incident laser pulses

    NASA Astrophysics Data System (ADS)

    Kelly, Edward; Johnson, Thomas

    2011-03-01

    Current laser safety standards for multiple pulse lasers are based primarily on modeling and the results of single pulse studies. Previous thermal effects studies have focused on histological and visible endpoints, with only a few studies examining the actual temperatures achieved. The goal of this research was to probe the actual vertical temperature profile produced by 2.01 micron laser pulses in the cornea. In this study the corneal temperature rise from multiple 2.01 micron Tm:YAG laser pulses was investigated using ex-vivo rabbit eyes. A thermal-measurement data set for a different number of pulses was collected and compared. An infrared thermal camera employing microbolometer detectors captured surface temperature rises resulting from laser pulses. Single 10 ms pulses as well as two, three, and four pulse sequences were utilized while the total energy delivered was held constant. A comparison of the data to temperatures required for denaturing proteins and the current laser safety guidelines will be presented.

  15. Hydra viridissima (green Hydra) rapidly recovers from multiple magnesium pulse exposures.

    PubMed

    Prouse, Andrea E; Hogan, Alicia C; Harford, Andrew J; van Dam, Rick A; Nugegoda, Dayanthi

    2015-08-01

    The time taken for organisms to recover from a pulsed toxicant exposure is an important consideration when water quality guidelines are applied to intermittent events in the environment. Organisms may appear to have recovered by standard toxicity testing methods but could carry residual toxicant or damage that may make them more sensitive to subsequent pulses. Such cumulative effects may render guidelines underprotective. The present study evaluated recovery of the freshwater cnidarian Hydra viridissima following multiple pulse exposure to magnesium (Mg). The H. viridissima were exposed to 4-h pulses of 790 mg/L and 1100 mg/L separated by 2-h, 10-h, 18-h, 24-h, 48-h, and 72-h recovery periods. Twenty-four-hour pulses of 570 mg/L, 910 mg/L, and 940 mg/L were separated by 24-h, 96-h, and 168-h recovery periods. All treatments showed similar or reduced sensitivity to the second pulse when compared with the single pulse, indicating that full recovery occurred prior to a second pulse-exposure. Five variations of equivalent time-weighted average concentrations were used to compare sensitivity of Hydra with various pulse scenarios. The sensitivity of the organisms to the multiple pulses was significantly lower than the time-weighted average continuous exposure response in 3 of the 4 scenarios tested, indicating that the Hydra benefited from interpulse recovery periods. The findings will be utilized alongside those from other species to inform the use of a site-specific, duration-based water quality guideline for Mg, and they provide an example of the use of empirical data in the regulation of toxicant pulses in the environment. PMID:25772150

  16. Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites.

    PubMed Central

    Cannon, W V; Kreutzer, R; Kent, H M; Morett, E; Buck, M

    1990-01-01

    The Klebsiella pneumoniae nifU promoter is positively controlled by the NifA protein and requires a form of RNA polymerase holoenzyme containing the rpoN encoded sigma factor, sigma 54. Occupancy of the K. pneumoniae nifU promoter by NifA was examined using in vivo dimethyl sulphate footprinting. Three binding sites for NifA (Upstream Activator Sequences, UASs 1, 2 and 3) located at -125, -116 and -72 were identified which conform to the UAS consensus sequence TGT-N10-ACA. An additional NifA binding site was identified at position -90. The UASs located at -125 (UAS1) and -116 (UAS2) overlap and do not appear to bind NifA as independent sites. They may represent a NifA binding site interacting with two NifA dimers. UAS3 is located at -72, and abuts a binding site for integration host factor (IHF) and is not normally highly occupied by NifA. In the absence of IHF UAS3 showed increased occupancy by NifA. Mutational and footprinting analysis of the three UASs indicates (1) IHF and NifA can compete for binding and that this competition influences the level of expression from the nifU promoter (2) that UAS2 is a principle sequence of the UAS 1,2 region required for activation and (3) that none of the NifA binding sites interacts with NifA independently. In vivo KMnO4 footprinting demonstrated that NifA catalyses open complex formation at the nifU promoter. IHF was required for maximal expression from the nifU and nifH promoters in Escherichia coli, and for the establishment of a Nif+ phenotype in E. coli from the nif plasmid pRD1. Images PMID:2186362

  17. Multi-pulse multi-delay (MPMD) multiple access modulation for UWB

    DOEpatents

    Dowla, Farid U.; Nekoogar, Faranak

    2007-03-20

    A new modulation scheme in UWB communications is introduced. This modulation technique utilizes multiple orthogonal transmitted-reference pulses for UWB channelization. The proposed UWB receiver samples the second order statistical function at both zero and non-zero lags and matches the samples to stored second order statistical functions, thus sampling and matching the shape of second order statistical functions rather than just the shape of the received pulses.

  18. [Research on the Method of Blood Pressure Monitoring Based on Multiple Parameters of Pulse Wave].

    PubMed

    Miao, Changyun; Mu, Dianwei; Zhang, Cheng; Miao, Chunjiao; Li, Hongqiang

    2015-10-01

    In order to improve the accuracy of blood pressure measurement in wearable devices, this paper presents a method for detecting blood pressure based on multiple parameters of pulse wave. Based on regression analysis between blood pressure and the characteristic parameters of pulse wave, such as the pulse wave transit time (PWTT), cardiac output, coefficient of pulse wave, the average slope of the ascending branch, heart rate, etc. we established a model to calculate blood pressure. For overcoming the application deficiencies caused by measuring ECG in wearable device, such as replacing electrodes and ECG lead sets which are not convenient, we calculated the PWTT with heart sound as reference (PWTT(PCG)). We experimentally verified the detection of blood pressure based on PWTT(PCG) and based on multiple parameters of pulse wave. The experiment results showed that it was feasible to calculate the PWTT from PWTT(PCG). The mean measurement error of the systolic and diastolic blood pressure calculated by the model based on multiple parameters of pulse wave is 1.62 mm Hg and 1.12 mm Hg, increased by 57% and 53% compared to those of the model based on simple parameter. This method has more measurement accuracy. PMID:26964321

  19. Pulsed squeezed light: Simultaneous squeezing of multiple modes

    SciTech Connect

    Wasilewski, Wojciech; Lvovsky, A. I.; Banaszek, Konrad; Radzewicz, Czeslaw

    2006-06-15

    We analyze the spectral properties of squeezed light produced by means of pulsed, single-pass degenerate parametric down-conversion. The multimode output of this process can be decomposed into characteristic modes undergoing independent squeezing evolution akin to the Schmidt decomposition of the biphoton spectrum. The main features of this decomposition can be understood using a simple analytical model developed in the perturbative regime. In the strong pumping regime, for which the perturbative approach is not valid, we present a numerical analysis, specializing to the case of one-dimensional propagation in a beta-barium borate waveguide. Characterization of the squeezing modes provides us with an insight necessary for optimizing homodyne detection of squeezing. For a weak parametric process, efficient squeezing is found in a broad range of local oscillator modes, whereas the intense generation regime places much more stringent conditions on the local oscillator. We point out that without meeting these conditions, the detected squeezing can actually diminish with the increasing pumping strength, and we expose physical reasons behind this inefficiency.

  20. Fiber-Optic Distribution Of Pulsed Power To Multiple Sensors

    NASA Technical Reports Server (NTRS)

    Kirkham, Harold

    1996-01-01

    Optoelectronic systems designed according to time-sharing scheme distribute optical power to multiple integrated-circuit-based sensors in fiber-optic networks. Networks combine flexibility of electronic sensing circuits with advantage of electrical isolation afforded by use of optical fibers instead of electrical conductors to transmit both signals and power. Fiber optics resist corrosion and immune to electromagnetic interference. Sensor networks of this type useful in variety of applications; for example, in monitoring strains in aircraft, buildings, and bridges, and in monitoring and controlling shapes of flexible structures.

  1. Multiple-cycle Simulation of a Pulse Detonation Engine Ejector

    NASA Technical Reports Server (NTRS)

    Yungster, S.; Perkins, H. D.

    2002-01-01

    This paper presents the results of a study involving single and multiple-cycle numerical simulations of various PDE-ejector configurations utilizing hydrogen-oxygen mixtures. The objective was to investigate the thrust, impulse and mass flow rate characteristics of these devices. The results indicate that ejector systems can utilize the energy stored in the strong shock wave exiting the detonation tube to augment the impulse obtained from the detonation tube alone. Impulse augmentation ratios of up to 1.9 were achieved. The axial location of the converging-diverging ejectors relative to the end of the detonation tube were shown to affect the performance of the system.

  2. Single- and multiple-pulse noncoherent detection statistics associated with partially developed speckle.

    PubMed

    Osche, G R

    2000-08-20

    Single- and multiple-pulse detection statistics are presented for aperture-averaged direct detection optical receivers operating against partially developed speckle fields. A partially developed speckle field arises when the probability density function of the received intensity does not follow negative exponential statistics. The case of interest here is the target surface that exhibits diffuse as well as specular components in the scattered radiation. An approximate expression is derived for the integrated intensity at the aperture, which leads to single- and multiple-pulse discrete probability density functions for the case of a Poisson signal in Poisson noise with an additive coherent component. In the absence of noise, the single-pulse discrete density function is shown to reduce to a generalized negative binomial distribution. The radar concept of integration loss is discussed in the context of direct detection optical systems where it is shown that, given an appropriate set of system parameters, multiple-pulse processing can be more efficient than single-pulse processing over a finite range of the integration parameter n. PMID:18350006

  3. Illusion induced overlapped optics.

    PubMed

    Zang, XiaoFei; Shi, Cheng; Li, Zhou; Chen, Lin; Cai, Bin; Zhu, YiMing; Zhu, HaiBin

    2014-01-13

    The traditional transformation-based cloak seems like it can only hide objects by bending the incident electromagnetic waves around the hidden region. In this paper, we prove that invisible cloaks can be applied to realize the overlapped optics. No matter how many in-phase point sources are located in the hidden region, all of them can overlap each other (this can be considered as illusion effect), leading to the perfect optical interference effect. In addition, a singular parameter-independent cloak is also designed to obtain quasi-overlapped optics. Even more amazing of overlapped optics is that if N identical separated in-phase point sources covered with the illusion media, the total power outside the transformation region is N2I0 (not NI0) (I0 is the power of just one point source, and N is the number point sources), which seems violating the law of conservation of energy. A theoretical model based on interference effect is proposed to interpret the total power of these two kinds of overlapped optics effects. Our investigation may have wide applications in high power coherent laser beams, and multiple laser diodes, and so on. PMID:24515019

  4. Multiple quasi-monoenergetic electron beams from laser-wakefield acceleration with spatially structured laser pulse

    SciTech Connect

    Ma, Y.; Li, M. H.; Li, Y. F.; Wang, J. G.; Tao, M. Z.; Han, Y. J.; Zhao, J. R.; Huang, K.; Yan, W. C.; Ma, J. L.; Li, Y. T.; Chen, L. M.; Li, D. Z.; Chen, Z. Y.; Sheng, Z. M.; Zhang, J.

    2015-08-15

    By adjusting the focus geometry of a spatially structured laser pulse, single, double, and treble quasi-monoenergetic electron beams were generated, respectively, in laser-wakefield acceleration. Single electron beam was produced as focusing the laser pulse to a single spot. While focusing the laser pulse to two spots that are approximately equal in energy and size and intense enough to form their own filaments, two electron beams were produced. Moreover, with a proper distance between those two focal spots, three electron beams emerged with a certain probability owing to the superposition of the diffractions of those two spots. The energy spectra of the multiple electron beams are quasi-monoenergetic, which are different from that of the large energy spread beams produced due to the longitudinal multiple-injection in the single bubble.

  5. HCNMBC - A pulse sequence for H-(C)-N Multiple Bond Correlations at natural isotopic abundance

    NASA Astrophysics Data System (ADS)

    Cheatham, Steve; Gierth, Peter; Bermel, Wolfgang; Kupče, Ēriks

    2014-10-01

    We propose a pulse sequence, HCNMBC for multiple-bond H-(C)-N correlation experiments via one-bond 1J(C,H) and one- or multiple bond nJ(N,C) coupling constants (typically n = 1-3) at the natural isotopic abundance. A new adiabatic refocussing sequence is introduced to provide accurate and robust refocussing of both chemical shift and J-evolution over wide ranges of C-13 and N-15 frequencies. It is demonstrated that the proposed pulse sequence provides high quality spectra even for sub-milligram samples. We show that when a 1.7 mm cryoprobe is available as little as 10 μg of glycine in D2O is sufficient to obtain the HCNMBC spectrum in ca. 12 h. The preliminary results indicate that the pulse sequence has a great potential in the structure determination of nitrogen heterocycles especially in cases where synthesis produces regioisomers.

  6. Properties of defect-induced multiple pulse laser damage of transmission components.

    PubMed

    Ma, Bin; Zhang, Li; Lu, Menglei; Wang, Ke; Jiao, Hongfei; Zhang, Jinlong; Cheng, Xinbin; Yang, Liming; Wang, Zhanshan

    2016-09-01

    When the number of laser pulses increases, the laser-induced damage threshold of the optical components gradually declines. The magnitude and tendency of this reduced threshold are associated with various factors. Furthermore, this reduced threshold is conclusively determined by the limiting factors or defect characteristics that trigger damage to optical components. Then, fully understanding the damage properties of different kinds of defects will contribute to the optimization of the performance and lifetime of the optical components. In this study, the statistical and deterministic characterizations of the fatigue effect are used to evaluate the properties of the multiple pulse laser damage of transmission components. First, the influence of spot sizes and polishing materials on the properties of the multiple pulse laser damage of optical components is discussed. Then, the structural, absorptive, and mixed artificial defects are fabricated, and the damage characteristics are evaluated and analyzed. Finally, the damage mechanism of different factors has been clarified. PMID:27607284

  7. Origin of the damage ring pattern in fused silica induced by multiple longitudinal modes laser pulses

    NASA Astrophysics Data System (ADS)

    Chambonneau, M.; Diaz, R.; Grua, P.; Rullier, J.-L.; Duchateau, G.; Natoli, J.-Y.; Lamaignère, L.

    2014-01-01

    Ring patterns surrounding laser damage sites at the exit surface of fused silica are systematically observed when initiated by multiple longitudinal modes nanosecond laser pulses at 1064 nm. The appearance chronology of rings is found to be closely related to the temporal shape of the laser pulses. This supports that the damage morphology originates from the coupling of a laser-supported detonation wave propagating in air with an ablation mechanism in silica. In our experiments, the propagation speed of the detonation wave reaches about 20 km/s and scales as the cube root of the laser intensity, in good agreement with theory.

  8. Pulse-excited, auto-zeroing multiple channel data transmission system

    DOEpatents

    Fasching, George E.

    1987-01-01

    A multiple channel data transmission system is provided in which signals from a plurality of pulse operated transducers and a corresponding plurality of pulse operated signal processor channels are multiplexed for single channel FM transmission to a receiving station. The transducers and corresponding channel amplifiers are powered by pulsing the dc battery power to these devices to conserve energy and battery size for long-term data transmission from remote or inaccessible locations. Auto zeroing of the signal channel amplifiers to compensate for drift associated with temperature changes, battery decay, component aging, etc., in each channel is accomplished by means of a unique auto zero feature which between signal pulses holds a zero correction voltage on an integrating capacitor coupled to the corresponding channel amplifier output. Pseudo-continuous outputs for each channel are achieved by pulsed sample-and-hold circuits which are updated at the pulsed operation rate. The sample-and-hold outputs are multiplexed into an FM/FM transmitter for transmission to an FM receiver station for demultiplexing and storage in separate channel recorders.

  9. Pulse-excited, auto-zeroing multiple channel data transmission system

    DOEpatents

    Fasching, G.E.

    1985-02-22

    A multiple channel data transmission system is provided in which signals from a plurality of pulse operated transducers and a corresponding plurality of pulse operated signal processor channels are multiplexed for single channel FM transmission to a receiving station. The transducers and corresponding channel amplifiers are powered by pulsing the dc battery power to these devices to conserve energy and battery size for long-term data transmission from remote or inaccessible locations. Auto zeroing of the signal channel amplifiers to compensate for drift associated with temperature changes, battery decay, component aging, etc., in each channel is accomplished by means of a unique auto zero feature which between signal pulses holds a zero correction voltage on an integrating capacitor coupled to the corresponding channel amplifier output. Pseudo-continuous outputs for each channel are achieved by pulsed sample-and-hold circuits which are updated at the pulsed operation rate. The sample-and-hold outputs are multiplexed into an FM/FM transmitter for transmission to an FM receiver station for demultiplexing and storage in separate channel recorders.

  10. Experimental study on double-pulse laser ablation of steel upon multiple parallel-polarized ultrashort-pulse irradiations

    NASA Astrophysics Data System (ADS)

    Schille, Joerg; Schneider, Lutz; Kraft, Sebastian; Hartwig, Lars; Loeschner, Udo

    2016-07-01

    In this paper, double-pulse laser processing is experimentally studied with the aim to explore the influence of ultrashort pulses with very short time intervals on ablation efficiency and quality. For this, sequences of 50 double pulses of varied energy and inter-pulse delay, as adjusted between 400 fs and 18 ns by splitting the laser beam into two optical paths of different length, were irradiated to technical-grade stainless steel. The depth and the volume of the craters produced were measured in order to evaluate the efficiency of the ablation process; the crater quality was analyzed by SEM micrographs. The results obtained were compared with craters produced with sequences of 50 single pulses and energies equal to the double pulse. It is demonstrated that double-pulse processing cannot exceed the ablation efficiency of single pulses of optimal fluence, but the ablation crater surface formed smoother if inter-pulse delay was in the range between 10 ns and 18 ns. In addition, the influence of pulse duration and energy distribution between the individual pulses of the double pulse on ablation was studied. For very short inter-pulse delay, no significant effect of energy variation within the double pulse on removal rate was found, indicating that the double pulse acts as a big single pulse of equal energy. Further, the higher removal efficiency was achieved when double-pulse processing using femtosecond pulses instead of picosecond pulses.

  11. Relaxation dynamics in the presence of pulse multiplicative noise sources with different correlation properties.

    PubMed

    Kargovsky, A V; Chichigina, O A; Anashkina, E I; Valenti, D; Spagnolo, B

    2015-10-01

    The relaxation dynamics of a system described by a Langevin equation with pulse multiplicative noise sources with different correlation properties is considered. The solution of the corresponding Fokker-Planck equation is derived for Gaussian white noise. Moreover, two pulse processes with regulated periodicity are considered as a noise source: the dead-time-distorted Poisson process and the process with fixed time intervals, which is characterized by an infinite correlation time. We find that the steady state of the system is dependent on the correlation properties of the pulse noise. An increase of the noise correlation causes the decrease of the mean value of the solution at the steady state. The analytical results are in good agreement with the numerical ones. PMID:26565201

  12. Role of multiple shots of femtosecond laser pulses in periodic surface nanoablation

    SciTech Connect

    Miyaji, Godai; Miyazaki, Kenzo

    2013-08-12

    Using a pump and probe technique, we observed time-dependent change in reflectivity of crystalline silicon surface to study the dynamic process of periodic surface nanostructure formation in femtosecond (fs) laser ablation. The results have shown that multiple shots of low-fluence fs laser pulses play the crucial role in the non-thermal process for nanostructuring through the increasing bonding structure change to amorphous silicon and resulting decrease in the ablation threshold.

  13. Synchronous precessional motion of multiple domain walls in a ferromagnetic nanowire by perpendicular field pulses

    PubMed Central

    Kim, June-Seo; Mawass, Mohamad-Assaad; Bisig, André; Krüger, Benjamin; Reeve, Robert M.; Schulz, Tomek; Büttner, Felix; Yoon, Jungbum; You, Chun-Yeol; Weigand, Markus; Stoll, Hermann; Schütz, Gisela; Swagten, Henk J. M.; Koopmans, Bert; Eisebitt, Stefan; Kläui, Mathias

    2014-01-01

    Magnetic storage and logic devices based on magnetic domain wall motion rely on the precise and synchronous displacement of multiple domain walls. The conventional approach using magnetic fields does not allow for the synchronous motion of multiple domains. As an alternative method, synchronous current-induced domain wall motion was studied, but the required high-current densities prevent widespread use in devices. Here we demonstrate a radically different approach: we use out-of-plane magnetic field pulses to move in-plane domains, thus combining field-induced magnetization dynamics with the ability to move neighbouring domain walls in the same direction. Micromagnetic simulations suggest that synchronous permanent displacement of multiple magnetic walls can be achieved by using transverse domain walls with identical chirality combined with regular pinning sites and an asymmetric pulse. By performing scanning transmission X-ray microscopy, we are able to experimentally demonstrate in-plane magnetized domain wall motion due to out-of-plane magnetic field pulses. PMID:24663150

  14. Stable radiation pressure acceleration of ions by suppressing transverse Rayleigh-Taylor instability with multiple Gaussian pulses

    NASA Astrophysics Data System (ADS)

    Zhou, M. L.; Liu, B.; Hu, R. H.; Shou, Y. R.; Lin, C.; Lu, H. Y.; Lu, Y. R.; Gu, Y. Q.; Ma, W. J.; Yan, X. Q.

    2016-08-01

    In the case of a thin plasma slab accelerated by the radiation pressure of an ultra-intense laser pulse, the development of Rayleigh-Taylor instability (RTI) will destroy the acceleration structure and terminate the acceleration process much sooner than theoretical limit. In this paper, a new scheme using multiple Gaussian pulses for ion acceleration in a radiation pressure acceleration regime is investigated with particle-in-cell simulation. We found that with multiple Gaussian pulses, the instability could be efficiently suppressed and the divergence of the ion bunch is greatly reduced, resulting in a longer acceleration time and much more collimated ion bunch with higher energy than using a single Gaussian pulse. An analytical model is developed to describe the suppression of RTI at the laser-plasma interface. The model shows that the suppression of RTI is due to the introduction of the long wavelength mode RTI by the multiple Gaussian pulses.

  15. Pulse

    MedlinePlus

    Heart rate; Heart beat ... The pulse can be measured at areas where an artery passes close to the skin. These areas include the: ... side of the foot Wrist To measure the pulse at the wrist, place the index and middle ...

  16. Characterization of a discontinuous atmospheric pressure interface. Multiple ion introduction pulses for improved performance

    NASA Astrophysics Data System (ADS)

    Gao, Liang; Li, Guangtao; Nie, Zongxiu; Duncan, Jason; Ouyang, Zheng; Cooks, R. Graham

    2009-06-01

    Discontinuous atmospheric pressure interfaces (DAPI) are used to match the rate of sample introduction to the pumping capacity of miniature mass spectrometers. In this study, the influence of the interface flow conductance and the mass spectrometer pumping speed on ion introduction into a handheld mass spectrometer is investigated. Results show that an intermediate flow conductance (2.6 × 10-3 L/s) gives the best ion introduction efficiency whereas the pumping speed has no influence in the range studied (0.35-7.1 L/s) except that a minimum pumping speed of 0.35 L/s is required. The linear dynamic range decreases with increasing interface open time, a result that corresponds to observations made using standard electrical gating of ion introduction a method that is not available at the high pressures involved in API into miniature systems where ions are transported through pneumatic flow. However, the mechanical opening of the interface with DAPI can be used for automatic gain control (AGC) using an external ion source. Software modifications to allow the use of multiple ion introduction pulses before mass analysis of the trapped ion population improve the detection limits. This method was validated by comparing the results obtained from the same sample using a single ion introduction pulse and multiple ion introduction pulses. In conjunction with this method, a broad-band waveform can be applied to selectively accumulate analyte ions, allowing essentially the entire ion trapping capacity to be devoted to one or more ions of interest.

  17. Multiple pulse thermal damage thresholds of materials for x-ray free electron laser optics investigated with an ultraviolet laser

    SciTech Connect

    Hau-Riege, Stefan P.; London, Richard A.; Bionta, Richard M.; Soufli, Regina; Ryutov, Dmitri; Shirk, Michael; Baker, Sherry L.; Smith, Patrick M.; Nataraj, Pradeep

    2008-11-17

    Optical elements to be used for x-ray free electron lasers (XFELs) must withstand multiple high-fluence pulses. We have used an ultraviolet laser to study the damage of two candidate materials, crystalline Si and B{sub 4}C-coated Si, emulating the temperature profile expected to occur in optics exposed to XFEL pulses. We found that the damage threshold for 10{sup 5} pulses is {approx}20% to 70% lower than the melting threshold.

  18. Bone growth in zebrafish fins occurs via multiple pulses of cell proliferation.

    PubMed

    Jain, Isha; Stroka, Christine; Yan, Jianying; Huang, Wei-Min; Iovine, M Kathryn

    2007-09-01

    Fin length in the zebrafish is achieved by the distal addition of bony segments of the correct length. Genetic and molecular data provided evidence that segment growth uses a single pulse of growth, followed by a period of stasis. Examination of cell proliferation during segment growth was predicted to expose a graphical model consistent with a single burst of cell division (e.g., constant, parabolic, or exponential decay) during the lengthening of the distal-most segment. Cell proliferation was detected either by labeling animals with bromodeoxyuridine (during S-phase) or monitoring histone3-phosphate (mitosis). Results from both methods revealed that the number of proliferating cells fluctuates in apparent pulses as a segment grows (i.e., during the growth phase). Thus, rather than segment size being the result of a single burst of proliferation, it appears that segment growth is the result of several pulses of cell division that occur approximately every 60 microns (average segment length approximately 250 microns). These results indicate that segment lengthening requires multiple pulses of cell proliferation. PMID:17676636

  19. High Dynamic Velocity Range Particle Image Velocimetry Using Multiple Pulse Separation Imaging

    PubMed Central

    Persoons, Tim; O’Donovan, Tadhg S.

    2011-01-01

    The dynamic velocity range of particle image velocimetry (PIV) is determined by the maximum and minimum resolvable particle displacement. Various techniques have extended the dynamic range, however flows with a wide velocity range (e.g., impinging jets) still challenge PIV algorithms. A new technique is presented to increase the dynamic velocity range by over an order of magnitude. The multiple pulse separation (MPS) technique (i) records series of double-frame exposures with different pulse separations, (ii) processes the fields using conventional multi-grid algorithms, and (iii) yields a composite velocity field with a locally optimized pulse separation. A robust criterion determines the local optimum pulse separation, accounting for correlation strength and measurement uncertainty. Validation experiments are performed in an impinging jet flow, using laser-Doppler velocimetry as reference measurement. The precision of mean flow and turbulence quantities is significantly improved compared to conventional PIV, due to the increase in dynamic range. In a wide range of applications, MPS PIV is a robust approach to increase the dynamic velocity range without restricting the vector evaluation methods. PMID:22346564

  20. Femtosecond laser ablation of sapphire on different crystallographic facet planes by single and multiple laser pulses irradiation

    NASA Astrophysics Data System (ADS)

    Qi, Litao; Nishii, Kazuhiro; Yasui, Motohiro; Aoki, Hikoharu; Namba, Yoshiharu

    2010-10-01

    Ablation of sapphire on different crystallographic facet planes by single and multiple laser pulses irradiation was carried out with a femtosecond pulsed laser operating at a wavelength of 780 nm and a pulse width of 164 fs. The quality and morphology of the laser ablated sapphire surface were evaluated by scanning electron microscopy and atomic force microscopy. For single laser pulse irradiation, two ablation phases were observed, which have a strong dependency on the pulse energy. The volume of the ablated craters kept an approximately linear relationship with the pulse energy. The threshold fluences of the two ablation phases on different crystallographic facet planes were calculated from the relationship between the squared diameter of the craters and pulse energy. With multiple laser pulses irradiation, craters free of cracks were obtained in the 'gentle' ablation phase. The threshold fluence for N laser pulses was calculated and found to decrease inversely to the number of laser pulses irradiating on the substrate surface due to incubation effect. The depth of the craters increased with the number of laser pulses until reaching a saturation value. The mechanism of femtosecond laser ablation of sapphire in two ablation phases was discussed and identified as either phase explosion, Coulomb explosion or particle vaporization. The choice of crystallographic facet plane has little effect on the process of femtosecond laser ablation of sapphire when compared with the parameters of the femtosecond laser pulses, such as pulse energy and number of laser pulses. In the 'gentle' ablation phase, laser-induced periodic surface structures (LIPSS) with a spatial period of 340 nm were obtained and the mechanism of the LIPSS formation is discussed. There is a potential application of the femtosecond laser ablation to the fabrication of sapphire-based devices.

  1. Magnetic resonance imaging of multiple sclerosis: a study of pulse-technique efficacy

    SciTech Connect

    Runge, V.M.; Price, A.C.; Kirshner, H.S.; Allen, J.H.; Partain, C.L.; James, A.E. Jr.

    1984-11-01

    Forty-two patients with the clinical diagnosis of multiple sclerosis were examined by proton magnetic resonance imaging (MRI) at 0.5 T. An extensive protocol was used to facilitate a comparison of the efficacy of different pulse techniques. Results were also compared in 39 cases with high-resolution x-ray computed tomography (CT). MRI revealed characteristic abnormalities in each case, whereas CT was positive in only 15 of 33 patients. Cerebral abnormalities were best shown with the T2-weighted spin-echo sequence: brainstem lesions were best defined on the inversion-recovery sequence.

  2. Few-Photon Multiple Ionization of Ne and Ar by Strong Free-Electron-Laser Pulses

    SciTech Connect

    Moshammer, R.; Jiang, Y. H.; Rudenko, A.; Ergler, Th.; Schroeter, C. D.; Luedemann, S.; Zrost, K.; Dorn, A.; Ferger, T.; Kuehnel, K. U.; Ullrich, J.; Foucar, L.; Titze, J.; Jahnke, T.; Schoeffler, M.; Doerner, R.; Fischer, D.; Weber, T.; Zouros, T. J. M.; Duesterer, S.

    2007-05-18

    Few-photon multiple ionization of Ne and Ar atoms by strong vacuum ultraviolet laser pulses from the free-electron laser at Hamburg was investigated differentially with the Heidelberg reaction microscope. The light-intensity dependence of Ne{sup 2+} production reveals the dominance of nonsequential two-photon double ionization at intensities of I<6x10{sup 12} W/cm{sup 2} and significant contributions of three-photon ionization as I increases. Ne{sup 2+} recoil-ion-momentum distributions suggest that two electrons absorbing ''instantaneously'' two photons are ejected most likely into opposite hemispheres with similar energies.

  3. Damage threshold of lithium niobate crystal under single and multiple femtosecond laser pulses: theoretical and experimental study

    NASA Astrophysics Data System (ADS)

    Meng, Qinglong; Zhang, Bin; Zhong, Sencheng; Zhu, Liguo

    2016-06-01

    The damage threshold of lithium niobate crystal under single and multiple femtosecond laser pulses has been studied theoretically and experimentally. Firstly, the model for the damage threshold prediction of crystal materials based on the improved rate equation has been proposed. Then, the experimental measure method of the damage threshold of crystal materials has been given in detail. On the basis, the variation of the damage threshold of lithium niobate crystal with the pulse duration has also been analyzed quantitatively. Finally, the damage threshold of lithium niobate crystal under multiple laser pulses has been measured and compared to the theoretical results. The results show that the transmittance of lithium niobate crystal is almost a constant when the laser pulse fluence is relative low, whereas it decreases linearly with the increase in the laser pulse fluence below the damage threshold. The damage threshold of lithium niobate crystal increases with the increase in the duration of the femtosecond laser pulse. And the damage threshold of lithium niobate crystal under multiple laser pulses is obviously lower than that irradiated by a single laser pulse. The theoretical data fall in good agreement with the experimental results.

  4. Multiple folded resonator for LD pulse end pumped Q-switched Yb:YAG slab laser.

    PubMed

    Jun, Liu; Jianguo, Xin; Ye, Lang; Jiabin, Chen

    2014-09-01

    In this paper, a multiple folded resonator is presented which consists of a multiple optical folding setup, a flat total reflector, a flat output coupler, a Q-switch crystal and a polarizer. By this technique, the output energy of 32.6mJ and pulse width of 13.4ns with a repetition rate of 5Hz was obtained, which is three times higher than that reported in the past publications by the use of the currently existing technique of the Q-switched slab gain lasers with the unstable resonator. The output beam with a quality of M² = 1.55 in the slow axis and M² = 1.40 in the fast axis was also obtained. PMID:25321590

  5. Boosting the electron spin coherence in binuclear Mn complexes by multiple microwave pulses

    NASA Astrophysics Data System (ADS)

    Zaripov, R.; Vavilova, E.; Miluykov, V.; Bezkishko, I.; Sinyashin, O.; Salikhov, K.; Kataev, V.; Büchner, B.

    2013-09-01

    We investigate a possibility to enhance the coherence time of electron spins in magnetic molecular complexes by application of the Carr-Purcell-Meiboom-Gill (CPMG) multiple microwave pulse sequence. Our theoretical analysis shows that the CPMG sequence can efficiently suppress the spin decoherence channel arising due to spectral diffusion induced by a random modulation of the hyperfine interaction which is an important source of the spin dephasing in molecular magnets. We confirm this by employing the CPMG protocol in pulse electron spin resonance experiments on model binuclear 1,2-diphosphacyclopentadienyl manganese complexes. We show that, compared to the standardly used two-pulse primary spin-echo technique, the CPMG experiment can boost the phase memory time up to one order of magnitude, bringing it to above 10 μs at low temperatures. This finding may be important for the implementation of quantum computation protocols on molecular magnets. We discuss a possible interesting analogy with the Zeno's paradox in quantum theory (the Zeno quantum effect), which could be implicit in the CPMG experiment.

  6. Overlap in Bibliographic Databases.

    ERIC Educational Resources Information Center

    Hood, William W.; Wilson, Concepcion S.

    2003-01-01

    Examines the topic of Fuzzy Set Theory to determine the overlap of coverage in bibliographic databases. Highlights include examples of comparisons of database coverage; frequency distribution of the degree of overlap; records with maximum overlap; records unique to one database; intra-database duplicates; and overlap in the top ten databases.…

  7. Polarizabilities of Impurity Doped Quantum Dots Under Pulsed Field: Role of Multiplicative White Noise

    NASA Astrophysics Data System (ADS)

    Saha, Surajit; Ghosh, Manas

    2016-02-01

    We perform a rigorous analysis of the profiles of a few diagonal and off-diagonal components of linear ( α xx , α yy , α xy , and α yx ), first nonlinear ( β xxx , β yyy , β xyy , and β yxx ), and second nonlinear ( γ xxxx , γ yyyy , γ xxyy , and γ yyxx ) polarizabilities of quantum dots exposed to an external pulsed field. Simultaneous presence of multiplicative white noise has also been taken into account. The quantum dot contains a dopant represented by a Gaussian potential. The number of pulse and the dopant location have been found to fabricate the said profiles through their interplay. Moreover, a variation in the noise strength also contributes evidently in designing the profiles of above polarizability components. In general, the off-diagonal components have been found to be somewhat more responsive to a variation of noise strength. However, we have found some exception to the above fact for the off-diagonal β yxx component. The study projects some pathways of achieving stable, enhanced, and often maximized output of linear and nonlinear polarizabilities of doped quantum dots driven by multiplicative noise.

  8. Effects of frame rate and image resolution on pulse rate measured using multiple camera imaging photoplethysmography

    NASA Astrophysics Data System (ADS)

    Blackford, Ethan B.; Estepp, Justin R.

    2015-03-01

    Non-contact, imaging photoplethysmography uses cameras to facilitate measurements including pulse rate, pulse rate variability, respiration rate, and blood perfusion by measuring characteristic changes in light absorption at the skin's surface resulting from changes in blood volume in the superficial microvasculature. Several factors may affect the accuracy of the physiological measurement including imager frame rate, resolution, compression, lighting conditions, image background, participant skin tone, and participant motion. Before this method can gain wider use outside basic research settings, its constraints and capabilities must be well understood. Recently, we presented a novel approach utilizing a synchronized, nine-camera, semicircular array backed by measurement of an electrocardiogram and fingertip reflectance photoplethysmogram. Twenty-five individuals participated in six, five-minute, controlled head motion artifact trials in front of a black and dynamic color backdrop. Increasing the input channel space for blind source separation using the camera array was effective in mitigating error from head motion artifact. Herein we present the effects of lower frame rates at 60 and 30 (reduced from 120) frames per second and reduced image resolution at 329x246 pixels (one-quarter of the original 658x492 pixel resolution) using bilinear and zero-order downsampling. This is the first time these factors have been examined for a multiple imager array and align well with previous findings utilizing a single imager. Examining windowed pulse rates, there is little observable difference in mean absolute error or error distributions resulting from reduced frame rates or image resolution, thus lowering requirements for systems measuring pulse rate over sufficient length time windows.

  9. Pulse

    MedlinePlus

    ... resting for at least 10 minutes. Take the exercise heart rate while you are exercising. ... pulse rate can help determine if the patient's heart is pumping. ... rate gives information about your fitness level and health.

  10. Gamma-ray pulse height spectrum analysis on systems with multiple Ge detectors using spectrum summing

    SciTech Connect

    Killian, E.W.

    1997-11-01

    A technique has been developed at the Idaho National Engineering Laboratory to sum high resolution gamma-ray pulse spectra from systems with multiple Ge detectors. Lockheed Martin Idaho Technologies Company operates a multi-detector spectrometer configuration at the Stored Waste Examination Pilot Plant facility which is used to characterize the radionuclide contents in waste drums destined for shipment to Waste Isolation Pilot Plant. This summing technique was developed to increase the sensitivity of the system, reduce the count times required to properly quantify the radio-nuclides and provide a more consistent methodology for combining data collected from multiple detectors. In spectrometer systems with multiple detectors looking at non homogeneous waste forms it is often difficult to combine individual spectrum analysis results from each detector to obtain a meaningful result for the total waste container. This is particularly true when the counting statistics in each individual spectrum are poor. The spectrum summing technique adds the spectra collected by each detector into a single spectrum which has better counting statistics than each individual spectrum. A normal spectral analysis program can then be used to analyze the sum spectrum to obtain radio-nuclide values which have smaller errors and do not have to be further manipulated to obtain results for the total waste container. 2 refs., 2 figs.

  11. Pulsed Multiple Reaction Monitoring Approach to Enhancing Sensitivity of a Tandem Quadrupole Mass Spectrometer

    PubMed Central

    Belov, Mikhail E.; Prasad, Satendra; Prior, David C.; Danielson, William F.; Weitz, Karl; Ibrahim, Yehia M.; Smith, Richard D.

    2011-01-01

    Liquid chromatography (LC)–triple quadrupole mass spectrometers operating in a multiple reaction monitoring (MRM) mode are increasingly used for quantitative analysis of low-abundance analytes in highly complex biochemical matrixes. After development and selection of optimum MRM transitions, sensitivity and data quality limitations are largely related to mass spectral peak interferences from sample or matrix constituents and statistical limitations at low number of ions reaching the detector. Herein, we report on a new approach to enhancing MRM sensitivity by converting the continuous stream of ions from the ion source into a pulsed ion beam through the use of an ion funnel trap (IFT). Evaluation of the pulsed MRM approach was performed with a tryptic digest of Shewanella oneidensis strain MR-1 spiked with several model peptides. The sensitivity improvement observed with the IFT coupled in to the triple quadrupole instrument is based on several unique features. First, ion accumulation radio frequency (rf) ion trap facilitates improved droplet desolvation, which is manifested in the reduced background ion noise at the detector. Second, signal amplitude for a given transition is enhanced because of an order-of-magnitude increase in the ion charge density compared to a continuous mode of operation. Third, signal detection at the full duty cycle is obtained, as the trap use eliminates dead times between transitions, which are inevitable with continuous ion streams. In comparison with the conventional approach, the pulsed MRM signals showed 5-fold enhanced peak amplitude and 2–3-fold reduced chemical background, resulting in an improvement in the limit of detection (LOD) by a factor of ~4–8. PMID:21344863

  12. Differential pulse amplitude modulation for multiple-input single-output OWVLC

    NASA Astrophysics Data System (ADS)

    Yang, S. H.; Kwon, D. H.; Kim, S. J.; Son, Y. H.; Han, S. K.

    2015-01-01

    White light-emitting diodes (LEDs) are widely used for lighting due to their energy efficiency, eco-friendly, and small size than previously light sources such as incandescent, fluorescent bulbs and so on. Optical wireless visible light communication (OWVLC) based on LED merges lighting and communications in applications such as indoor lighting, traffic signals, vehicles, and underwater communications because LED can be easily modulated. However, physical bandwidth of LED is limited about several MHz by slow time constant of the phosphor and characteristics of device. Therefore, using the simplest modulation format which is non-return-zero on-off-keying (NRZ-OOK), the data rate reaches only to dozens Mbit/s. Thus, to improve the transmission capacity, optical filtering and pre-, post-equalizer are adapted. Also, high-speed wireless connectivity is implemented using spectrally efficient modulation methods: orthogonal frequency division multiplexing (OFDM) or discrete multi-tone (DMT). However, these modulation methods need additional digital signal processing such as FFT and IFFT, thus complexity of transmitter and receiver is increasing. To reduce the complexity of transmitter and receiver, we proposed a novel modulation scheme which is named differential pulse amplitude modulation. The proposed modulation scheme transmits different NRZ-OOK signals with same amplitude and unit time delay using each LED chip, respectively. The `N' parallel signals from LEDs are overlapped and directly detected at optical receiver. Received signal is demodulated by power difference between unit time slots. The proposed scheme can overcome the bandwidth limitation of LEDs and data rate can be improved according to number of LEDs without complex digital signal processing.

  13. Characteristics of multiple filaments generated by femtosecond laser pulses in air: Prefocused versus free propagation

    NASA Astrophysics Data System (ADS)

    Hao, Zuoqiang; Zhang, Jie; Zhang, Zhe; Yuan, Xiaohui; Zheng, Zhiyuan; Lu, Xin; Jin, Zhan; Wang, Zhaohua; Zhong, Jiayong; Liu, Yunquan

    2006-12-01

    The characteristics of the multiple filaments formed by prefocused and freely propagating femtosecond laser pulses are investigated and compared. It is shown in our experiments that the diameter, length, stability, and interaction for the two cases can be quite different. The filaments formed by prefocused beam indicate dynamic spatial evolution with higher laser intensity and electron density. They have a typical diameter of 100μm are of shorter length. In the free propagation case, the filaments exhibit interesting properties such as hundred-meter propagation distance and mm-size diameter. Moreover, only the interaction of the filaments with the energy background affects the evolution of the filaments. Filament-filament interactions such as the filament splitting and merging were not observed in this case.

  14. Characteristics of multiple filaments generated by femtosecond laser pulses in air: Prefocused versus free propagation

    SciTech Connect

    Hao Zuoqiang; Zhang Jie; Zhang Zhe; Zheng Zhiyuan; Lu Xin; Jin Zhan; Wang Zhaohua; Liu Yunquan; Yuan Xiaohui; Zhong Jiayong

    2006-12-15

    The characteristics of the multiple filaments formed by prefocused and freely propagating femtosecond laser pulses are investigated and compared. It is shown in our experiments that the diameter, length, stability, and interaction for the two cases can be quite different. The filaments formed by prefocused beam indicate dynamic spatial evolution with higher laser intensity and electron density. They have a typical diameter of 100 {mu}m are of shorter length. In the free propagation case, the filaments exhibit interesting properties such as hundred-meter propagation distance and mm-size diameter. Moreover, only the interaction of the filaments with the energy background affects the evolution of the filaments. Filament-filament interactions such as the filament splitting and merging were not observed in this case.

  15. Multiple attractors in stage-structured population models with birth pulses.

    PubMed

    Tang, Sanyi; Chen, Lansun

    2003-05-01

    In most models of population dynamics, increases in population due to birth are assumed to be time-independent, but many species reproduce only during a single period of the year. A single species stage-structured model with density-dependent maturation rate and birth pulse is formulated. Using the discrete dynamical system determined by its Poincaré map, we report a detailed study of the various dynamics, including (a) existence and stability of nonnegative equilibria, (b) nonunique dynamics, meaning that several attractors coexist, (c) basins of attraction (defined as the set of the initial conditions leading to a certain type of attractor), (d) supertransients, and (e) chaotic attractors. The occurrence of these complex dynamic behaviour is related to the fact that minor changes in parameter or initial values can strikingly change the dynamic behaviours of system. Further, it is shown that periodic birth pulse, in effect, provides a natural period or cyclicity that allows multiple oscillatory solutions in the continuous dynamical systems. PMID:12749535

  16. A preliminary comparison of the transient effects of single versus multiple q-switched doubled-neodymium laser pulses

    NASA Astrophysics Data System (ADS)

    Previc, Fred H.

    1987-09-01

    A comparison between the effects of single and multiple laser pulse-trains of equivalent energy was performed. Visual evoked potentials (VEPS) recorded bipolarly from the visual cortex of two rhesus monkeys in response to a counterphasing grating were used to assess the magnitude of the visual loss following four types of exposures: single and multiple pulses with total energies equal to 50 and 500 percent of the maximum permissible exposure (MPE) standard for humans. The results showed that the effects of a series of laser flashes presented within 200 ms are similar to those of a single laser flash whose energy is equivalent to the cumulative energy of the multiple-pulse exposure.

  17. Seeding for pervasively overlapping communities

    NASA Astrophysics Data System (ADS)

    Lee, Conrad; Reid, Fergal; McDaid, Aaron; Hurley, Neil

    2011-06-01

    In some social and biological networks, the majority of nodes belong to multiple communities. It has recently been shown that a number of the algorithms specifically designed to detect overlapping communities do not perform well in such highly overlapping settings. Here, we consider one class of these algorithms, those which optimize a local fitness measure, typically by using a greedy heuristic to expand a seed into a community. We perform synthetic benchmarks which indicate that an appropriate seeding strategy becomes more important as the extent of community overlap increases. We find that distinct cliques provide the best seeds. We find further support for this seeding strategy with benchmarks on a Facebook network and the yeast interactome.

  18. T-Cell Memory Responses Elicited by Yellow Fever Vaccine are Targeted to Overlapping Epitopes Containing Multiple HLA-I and -II Binding Motifs

    PubMed Central

    de Melo, Andréa Barbosa; Nascimento, Eduardo J. M.; Braga-Neto, Ulisses; Dhalia, Rafael; Silva, Ana Maria; Oelke, Mathias; Schneck, Jonathan P.; Sidney, John; Sette, Alessandro; Montenegro, Silvia M. L.; Marques, Ernesto T. A.

    2013-01-01

    The yellow fever vaccines (YF-17D-204 and 17DD) are considered to be among the safest vaccines and the presence of neutralizing antibodies is correlated with protection, although other immune effector mechanisms are known to be involved. T-cell responses are known to play an important role modulating antibody production and the killing of infected cells. However, little is known about the repertoire of T-cell responses elicited by the YF-17DD vaccine in humans. In this report, a library of 653 partially overlapping 15-mer peptides covering the envelope (Env) and nonstructural (NS) proteins 1 to 5 of the vaccine was utilized to perform a comprehensive analysis of the virus-specific CD4+ and CD8+ T-cell responses. The T-cell responses were screened ex-vivo by IFN-γ ELISPOT assays using blood samples from 220 YF-17DD vaccinees collected two months to four years after immunization. Each peptide was tested in 75 to 208 separate individuals of the cohort. The screening identified sixteen immunodominant antigens that elicited activation of circulating memory T-cells in 10% to 33% of the individuals. Biochemical in-vitro binding assays and immunogenetic and immunogenicity studies indicated that each of the sixteen immunogenic 15-mer peptides contained two or more partially overlapping epitopes that could bind with high affinity to molecules of different HLAs. The prevalence of the immunogenicity of a peptide in the cohort was correlated with the diversity of HLA-II alleles that they could bind. These findings suggest that overlapping of HLA binding motifs within a peptide enhances its T-cell immunogenicity and the prevalence of the response in the population. In summary, the results suggests that in addition to factors of the innate immunity, “promiscuous” T-cell antigens might contribute to the high efficacy of the yellow fever vaccines. PMID:23383350

  19. Hemodynamics in coronary arteries with overlapping stents.

    PubMed

    Rikhtegar, Farhad; Wyss, Christophe; Stok, Kathryn S; Poulikakos, Dimos; Müller, Ralph; Kurtcuoglu, Vartan

    2014-01-22

    Coronary artery stenosis is commonly treated by stent placement via percutaneous intervention, at times requiring multiple stents that may overlap. Stent overlap is associated with increased risk of adverse clinical outcome. While changes in local blood flow are suspected to play a role therein, hemodynamics in arteries with overlapping stents remain poorly understood. In this study we analyzed six cases of partially overlapping stents, placed ex vivo in porcine left coronary arteries and compared them to five cases with two non-overlapping stents. The stented vessel geometries were obtained by micro-computed tomography of corrosion casts. Flow and shear stress distribution were calculated using computational fluid dynamics. We observed a significant increase in the relative area exposed to low wall shear stress (WSS<0.5 Pa) in the overlapping stent segments compared both to areas without overlap in the same samples, as well as to non-overlapping stents. We further observed that the configuration of the overlapping stent struts relative to each other influenced the size of the low WSS area: positioning of the struts in the same axial location led to larger areas of low WSS compared to alternating struts. Our results indicate that the overlap geometry is by itself sufficient to cause unfavorable flow conditions that may worsen clinical outcome. While stent overlap cannot always be avoided, improved deployment strategies or stent designs could reduce the low WSS burden. PMID:24275438

  20. Thermal and damage data from multiple microsecond pulse trains at 532nm in an in vitro retinal model

    NASA Astrophysics Data System (ADS)

    Denton, Michael L.; Tijerina, Amanda J.; Hoffman, Aaron; Clark, Clifton D.; Noojin, Gary D.; Rickman, John M.; Castellanos, Cherry C.; Shingledecker, Aurora D.; Boukhris, Sarah J.; Thomas, Robert J.; Rockwell, Benjamin A.

    2014-03-01

    An artificially pigmented retinal pigment epithelial (RPE) cell model was used to study the damage rates for exposure to 1, 10, 100, and 1,000 230-μs laser pulses at 532 nm, at two different concentrations of melanosome particles (MPs) per cell. Multiple pulses were delivered at pulse repetition rates of 50 and 99 pulses per second. Standard fluorescence viability indicator dyes and the method of microthermography were used to assess damage and thermal responses, respectively. Although frame rate during microthermography was more than five times slower than the duration of laser pulses, thermal information was useful in refining the BTEC computational model for simulating high-resolution thermal responses by the pigmented cells. When we temporally sampled the thermal model output at a rate similar to our microthermography, the resulting thermal profiles for multiple pulses resembled the thermal experimental profiles. Complementary to the thermal simulations, our computer-generated thresholds were in good agreement with the in vitro data. Findings are examined within the context of common exposure limit definitions in the national and international laser safety standards.

  1. Multi-pulse frequency shifted (MPFS) multiple access modulation for ultra wideband

    DOEpatents

    Nekoogar, Faranak; Dowla, Farid U.

    2012-01-24

    The multi-pulse frequency shifted technique uses mutually orthogonal short duration pulses o transmit and receive information in a UWB multiuser communication system. The multiuser system uses the same pulse shape with different frequencies for the reference and data for each user. Different users have a different pulse shape (mutually orthogonal to each other) and different transmit and reference frequencies. At the receiver, the reference pulse is frequency shifted to match the data pulse and a correlation scheme followed by a hard decision block detects the data.

  2. Supporting Uavs in Low Visibility Conditions by Multiple-Pulse Laser Scanning Devices

    NASA Astrophysics Data System (ADS)

    Djuricic, A.; Jutzi, B.

    2013-04-01

    Unmanned Aerial Vehicles (UAVs) are nowadays promising platforms for capturing spatial information, because they are low cost solutions, which are easy to bring to the surveying field and can operate automatically. Usually these devices are equipped with visual sensors to support the navigation of the platform or to transmit observations of the environment to the operator. By collecting the data and processing the captured images even an estimation of the observed environment in form of 3D information is available. Therefore Simultaneous Localization and Mapping (SLAM) algorithms are well known for processing data which is captured in the visible domain. However, situations can occur where gathering visual information is difficult due to given limitations in form of low visibility. For example if soft obstacles in form of translucent materials are given in disaster scenarios with smoke and operating has still to be ensured, active optical sensors (e.g. laser scanners) are gaining interest because they can penetrate the soft obstacle and allow to acquire information behind it. A new lightweight (210 g), simplified and minimized scanning unit is now available which allows to capture multiple reflections for each transmitted laser pulse, namely the Hokuyo UTM-30LX-EW. With such a device, it is possible to overcome the above mentioned restrictions or limitations of low visibility by soft obstacles and even measure under critical circumstances. A multi-pulse system can provide accurate measurements on, within, and behind the soft obstacle. This research focuses on investigating the ability and performance of a laser scanner to penetrate the soft obstacle. Thus, investigations on a system that overcomes these limitations and provides a solution will be given. First promising experimental results considering soft obstacle are described.

  3. Parallel determination of absolute distances to multiple targets by time-of-flight measurement using femtosecond light pulses.

    PubMed

    Han, Seongheum; Kim, Young-Jin; Kim, Seung-Woo

    2015-10-01

    Distances to multiple targets are measured simultaneously using a single femtosecond pulse laser split through a diffractive optical element. Pulse arrival from each target is detected by means of balanced cross-correlation of second harmonics generated using a PPKTP crystal. Time-of-flight of each returning pulse is counted by dual-comb interferometry with 0.01 ps timing resolution at a 2 kHz update rate. This multi-target ranging capability is demonstrated by performing multi-degree of freedom (m-DOF) sensing of a rigid-body motion simulating a satellite operating in orbit. This method is applicable to diverse terrestrial and space applications requiring concurrent multiple distance measurements with high precision. PMID:26480101

  4. Generation of multiple analog pulses with different duty cycles within VME control system for ICRH Aditya system

    NASA Astrophysics Data System (ADS)

    Joshi, Ramesh; Singh, Manoj; Jadav, H. M.; Misra, Kishor; Kulkarni, S. V.; ICRH-RF Group

    2010-02-01

    Ion Cyclotron Resonance Heating (ICRH) is a promising heating method for a fusion device due to its localized power deposition profile, a direct ion heating at high density, and established technology for high RF power generation and transmission at low cost. Multiple analog pulse with different duty cycle in master of digital pulse for Data acquisition and Control system for steady state RF ICRH System(RF ICRH DAC) to be used for operating of RF Generator in Aditya to produce pre ionization and second analog pulse will produce heating. The control system software is based upon single digital pulse operation for RF source. It is planned to integrate multiple analog pulses with different duty cycle in master of digital pulse for Data acquisition and Control system for RF ICRH System(RF ICRH DAC) to be used for operating of RF Generator in Aditya tokamak. The task of RF ICRH DAC is to control and acquisition of all ICRH system operation with all control loop and acquisition for post analysis of data with java based tool. For pre ionization startup as well as heating experiments using multiple RF Power of different powers and duration. The experiment based upon the idea of using single RF generator to energize antenna inside the tokamak to radiate power twise, out of which first analog pulse will produce pre ionization and second analog pulse will produce heating. The whole system is based on standard client server technology using tcp/ip protocol. DAC Software is based on linux operating system for highly reliable, secure and stable system operation in failsafe manner. Client system is based on tcl/tk like toolkit for user interface with c/c++ like environment which is reliable programming languages widely used on stand alone system operation with server as vxWorks real time operating system like environment. The paper is focused on the Data acquisition and monitoring system software on Aditya RF ICRH System with analog pulses in slave mode with digital pulse in

  5. Evidence of multiple flooding events or pulses from erosional features in Martian outflow channels

    NASA Astrophysics Data System (ADS)

    Davatzes, A.; Gulick, V.; Keszthelyi, L.; HiRISE Team

    2007-12-01

    Cataracts, steep knickpoints in large outflow channels, were once large waterfalls on the martian surface. New images of cataracts in the Kasei, Ares, and Mangala Valles obtained by the High Resolution Imaging Science Experiment (HiRISE) onboard the Mars Reconnaissance Orbiter (MRO) in conjunction with topography from the Mars Orbiter Laser Altimeter (MOLA) are used to further constrain channel outflow rates and durations. Both the morphology and geometry of these erosional features help us to further elucidate the history of these outflow channels. Morphologically, all of the cataract systems have horseshoe-shaped headcuts and longitudinal grooves. These morphological features are strikingly similar to terrestrial flood erosional features from the Missoula Flood, Jokulsa a Fjollum, and English Channel flood. Like terrestrial cataracts, the Martian cataracts have significantly lower width-to-depth ratios compared to the rest of the channel, consistent with erosion into bedrock. Knickpoint recession is also evident from these images. The Ares Valles cataract has migrated more than 35 km, an order of magnitude more than the terrestrial examples of catastrophic floods. Most estimates from Ares Vallis suggest similar discharge rates to the terrestrial floods, though some estimates of Martian flood discharge are significantly higher. High resolution imaging shows that nearly all of the cataract systems have multiple generations of erosion, with smaller subchannels within the cataract system. Based on the length of the recession and the morphological evidence, multiple flooding events are possible in most of these Martian channels, either by discrete events or pulses of flow. All of the terrestrial examples resulted from the breaching of a rock or ice dam, releasing a glacial flood. Most of the Martian outflow channel discharges likely came from the subsurface. DEM's of these cataracts from HiRISE and CTX stereo pairs will be input into a 2.5D hydraulic flood model to

  6. Spin Dynamics Simulations of Multiple Echo Spacing Pulse Sequences in Grossly Inhomogeneous Fields

    SciTech Connect

    Heidler, R.; Bachman, H. N.; Johansen, Y.

    2008-12-05

    Pulse sequences with multiple lengths of echo spacings are used in oilfield NMR logging for diffusion-based NMR applications such as rock and fluid characterization. One specific implementation is the so-called diffusion editing sequence comprising two long echo spacings followed by a standard CPMG at a shorter echo spacing. The echoes in the CPMG portion contain signal from both the direct and stimulated echoes.Modern oilfield NMR logging tools are designed for continuous depth logging of earth formations by projecting both the static (B{sub 0}) and dynamic (B{sub 1}) fields into the formation. Both B{sub 0} and B{sub 1} profiles are grossly inhomogeneous which results in non-steady-state behavior in the early echoes. The spin dynamics effects present a challenge for processing the echo amplitudes to measure porosity (amplitude extrapolated to zero time) and attenuations for fluid or pore size characterization.In this work we describe a calculation of the spin dynamics of the diffusion editing sequence with two long echo spacings. The calculation takes into account full B{sub 1} and B{sub 0} field maps, and comparisons will be made for sensors and parameters typical of oilfield logging tools and environments.

  7. Consistent Simulation of Pulse-Like Conservative and Reactive Stream-Tracer Experiments on Multiple Scales

    NASA Astrophysics Data System (ADS)

    Liao, Z.; Gritsch, M.; Knapp, J.; Lemke, D.; Cirpka, O. A.

    2012-12-01

    The redox-sensitive compound resazurin (Raz) has recently been introduced as reactive tracer for streams undergoing hyporheic exchange. Resazurin is converted to resorufin (Rru) in viable cells so that the Raz-Rru system acts as a probe for the metabolic activity of a stream, which is believed to be concentrated in the hyporheic zone. The reactive tracers, however, can also be sorbed. Advective-dispersive transport in the stream, potentially non-conventional transient storage in the hyporheic zone, sorption at the riverbed material, and transformation of the compounds leads to a coupled system that needs to be considered when analyzing pulse-like tracer experiments with the Raz-Rru system and a conservative tracer. We present a consistent model formulation of the reactive-transport system and apply it in the interpretation of experiments on multiple scales. (1) Column experiments with a length of about 10cm indicate that Raz and Rru undergo two-site sorption and chemical transformation during the passage through riverbed material. (2) We have analyzed breakthrough curves of the conservative and reactive tracers in piezometers within gravel bars during stream-tracer experiments. The conservative-tracer breakthrough curves in the gravel bar and in the stream directly beside it were deconvoluted to obtain the stream-to-piezometer travel-time distribution. Fitting the reactive tracer breakthrough curves, while accounting for the conservative travel-time distribution and the input signal in the stream, confirmed the two-site-sorption plus decay model of the Raz-Rru system in the hyporheic zone. (3) On the scale of entire stream reaches, we have jointly analyzed the conservative and reactive tracer breakthrough curves using a shape-free approach for the hyporheic travel-time distribution, two-site sorption of Raz and Rru in the hyporheic zone, and the Raz-to-Rru transformation. By this, we could identify the stream velocity, in-stream dispersion coefficient, the

  8. Experimental study of resolution of proton chemical shifts in solids: Combined multiple pulse NMR and magic-angle spinning

    SciTech Connect

    Ryan, L.M.; Taylor, R.E.; Paff, A.J.; Gerstein, B.C.

    1980-01-01

    High-resolution nuclear magnetic resonance spectra of protons in rigid, randomly oriented solids have been measured using combined homonuclear dipolar decoupling (via multiple pulse techniques) and attenuation of chemical shift anisotropies (via magic-angle sample spinning). Under those conditions, isotropic proton chemical shifts were recorded for a variety of chemical species, with individual linewidths varying from about 55 to 110 Hz (1--2 ppm). Residual line broadening was due predominately to (i) magnetic-field instability and inhomogeneity, (ii) unresolved proton--proton spin couplings, (iii) chemical shift dispersion, (iv) residual dipolar broadening, and (v) lifetime broadening under the multiple pulse sequences used. The magnitudes of those effects and the current limits of resolution for this experiment in our spectrometer have been investigated. The compounds studied included organic solids (4, 4'-dimethylbenzophenone, 2, 6-dimethylbenzoic acid, and aspirin), polymers (polystyrene and polymethylmethacrylate), and the vitrain portion of a bituminous coal.

  9. Mechanism of Resonance-enhanced X-ray Multiple Ionization of Argon Atom in an XFEL Pulse

    NASA Astrophysics Data System (ADS)

    Young, Linda; Ho, Phay

    2014-05-01

    We present a new Monte Carlo rate equation (MCRE) approach to examine the inner-shell ionization dynamics of atoms in an intense x-ray free-electron laser (XFEL) pulse. In addition to photoionization, Auger decay and fluorescence processes, we include bound-to-bound transitions in the rate equation calculations. This computational tool allows us to account for ``hidden resonances'' unveiled in high charge states of atom in XFEL pulse. Using our MCRE approach, we investigated the ionization dynamics of Argon atom exposed to an 480-eV XFEL pulse. At this photon energy, it is not energetically allowed to produce Ar ions with charge 10 + and higher via direct one-photon L-shell ionization. Rather, we found that the resonance-enhanced x-ray multiple ionization (REXMI) pathways play a dominant role in producing these highly charged ions. Our calculated results agree with the measured Ar ion yield data. More importantly, we account for the pulse-duration dependence of experimental ion yield data and identify the responsible REXMI pathways where excitation of multiple electrons into outer valence and Rydberg orbitals are followed by autoionization. Supported by the Chemical Sciences, Geosciences, and Biosciences Di- vision, Office of Basic Energy Sciences, Office of Science, US Dept of Energy, Contract DE-AC02-06CH11357.

  10. Experimental demonstration of multiple pulse nonlinear optoacoustic signal generation and control.

    PubMed

    Blackmon, Fletcher; Antonelli, Lynn

    2005-01-01

    Generating underwater acoustic signals from a remote, aerial location by use of a high-energy pulsed infrared laser has been demonstrated. The laser beam is directed from the air and focused onto the water surface, where the optical energy was converted into a propagating acoustic wave. Sound pressure levels of 185 dB re microPa (decibel re microPa) were consistently recorded under freshwater laboratory conditions at laser-pulse repetition rates of up to 1000 pulses/s. The nonlinear optoacoustic transmission concept is outlined, and the experimental results from investigation of the time-domain and frequency-domain characteristics of the generated underwater sound are provided. A high repetition rate, high-energy per pulse laser was used in this test under freshwater laboratory conditions. A means of deterministically controlling the spectrum of the underwater acoustic signal was investigated and demonstrated by varying the laser-pulse repetition rate. PMID:15662891

  11. A digital spectrometer approach to obtaining multiple time-resolved gamma-ray spectra for pulsed spectroscopy

    NASA Astrophysics Data System (ADS)

    Tan, H.; Mitra, S.; Fallu-Labruyere, A.; Hennig, W.; Chu, Y. X.; Wielopolski, L.; Warburton, W. K.

    2007-10-01

    Neutron-induced gamma-ray emission and its detection using a pulsed neutron generator system is an established analytical technique for quantitative multi-element analysis. Traditional gamma-ray spectrometers used for this type of analysis are normally operated either in coincidence mode - for counting prompt gamma-rays following inelastic neutron scattering (INS) events when the neutron generator is ON, or in anti-coincidence mode - for counting prompt gamma-rays from thermal neutron capture (TNC) processes when the neutron generator is OFF. We have developed a digital gamma-ray spectrometer for concurrently measuring both the INS and TNC gamma-rays using a 14 MeV pulsed neutron generator. The spectrometer separates the gamma-ray counts into two independent spectra together with two separate sets of counting statistics based on the external gate level. Because the TNC gamma-ray yields are time dependent, additional accuracy in analyzing the data can be obtained by acquiring multiple time-resolved gamma-ray spectra at finer time intervals than simply ON or OFF. For that purpose we are developing a multi-gating system that will allow gamma-ray spectra to be acquired concurrently in real time with up to 16 time slots. The conceptual system design is presented, especially focusing on considerations for tracking counting statistics in multiple time slots and on the placement of pulse heights into multiple spectra in real time.

  12. Restoration and reconstruction from overlapping images

    NASA Technical Reports Server (NTRS)

    Reichenbach, Stephen E.; Kaiser, Daniel J.; Hanson, Andrew L.; Li, Jing

    1997-01-01

    This paper describes a technique for restoring and reconstructing a scene from overlapping images. In situations where there are multiple, overlapping images of the same scene, it may be desirable to create a single image that most closely approximates the scene, based on all of the data in the available images. For example, successive swaths acquired by NASA's planned Moderate Imaging Spectrometer (MODIS) will overlap, particularly at wide scan angles, creating a severe visual artifact in the output image. Resampling the overlapping swaths to produce a more accurate image on a uniform grid requires restoration and reconstruction. The one-pass restoration and reconstruction technique developed in this paper yields mean-square-optimal resampling, based on a comprehensive end-to-end system model that accounts for image overlap, and subject to user-defined and data-availability constraints on the spatial support of the filter.

  13. Alignment enhancement of molecules embedded in helium nanodroplets by multiple laser pulses

    NASA Astrophysics Data System (ADS)

    Christiansen, Lars; Nielsen, Jens H.; Pentlehner, Dominik; Underwood, Jonathan G.; Stapelfeldt, Henrik

    2015-11-01

    We show experimentally that field-free one-dimensional (1D) alignment of 1,4-diiodobenzene molecules embedded in helium nanodroplets, induced by a single, linearly polarized 200-fs laser pulse, can be significantly enhanced by using two or four optimally synchronized laser pulses. The strongest degree of 1D alignment is obtained with four pulses and gives >0.60 . Besides the immediate implications for molecular frame studies, our results pave the way for more general manipulation of rotational motion of molecules in He droplets.

  14. Multiple continuous-wave and pulsed modes of a figure-of-eight fibre laser

    NASA Astrophysics Data System (ADS)

    Pottiez, O.; Martinez-Rios, A.; Monzon-Hernandez, D.; Salceda-Delgado, G.; Hernandez-Garcia, J. C.; Ibarra-Escamilla, B.; Kuzin, E. A.

    2013-03-01

    We study experimentally a figure-of-eight fibre laser including a polarization-imbalanced nonlinear optical loop mirror and a Mach-Zehnder optical filter formed by two fibre tapers placed in series. Depending on the adjustments of two wave retarders included in the setup, different modes of operation of the laser are found. In continuous-wave mode, tunable single-wavelength operation as well as multiwavelength lasing are observed. For some adjustments, self-pulsing also takes place, although the pulses are very unstable. Finally, for some adjustments a mechanical stimulation (a kick) leads to the onset of passive mode locking. Measurements reveal that the mode-locked pulses actually are noise-like pulses. Both stable fundamental mode locking and second-harmonic mode locking with particular dynamics were obtained. In this work, we analyse how simple wave plate adjustments can lead to such a variety of operational modes of the fibre laser.

  15. Classical-quantum correspondence in atomic ionization by midinfrared pulses: Multiple peak and interference structures

    NASA Astrophysics Data System (ADS)

    Lemell, Christoph; Burgdörfer, Joachim; Gräfe, Stefanie; Dimitriou, Konstantinos I.; Arbó, Diego G.; Tong, Xiao-Min

    2013-01-01

    Atomic ionization by strong and ultrashort laser pulses with frequencies in the midinfrared spectral region have revealed novel features such as the low-energy structures. We have performed fully three-dimensional quantum dynamical as well as classical trajectory Monte Carlo simulations for pulses with wavelengths from λ=2000 to 6000 nm. Furthermore, we apply distorted-wave quantum approximations. This allows to explore the quantum-classical correspondence as well as the (non) perturbative character of the ionization dynamics driven by long-wavelength pulses. We observe surprisingly rich structures in the differential energy and angular momentum distribution which sensitively depend on λ, the pulse duration τp, and the carrier-envelope phase ϕCEP.

  16. Correlated edge overlaps in multiplex networks.

    PubMed

    Baxter, Gareth J; Bianconi, Ginestra; da Costa, Rui A; Dorogovtsev, Sergey N; Mendes, José F F

    2016-07-01

    We develop the theory of sparse multiplex networks with partially overlapping links based on their local treelikeness. This theory enables us to find the giant mutually connected component in a two-layer multiplex network with arbitrary correlations between connections of different types. We find that correlations between the overlapping and nonoverlapping links markedly change the phase diagram of the system, leading to multiple hybrid phase transitions. For assortative correlations we observe recurrent hybrid phase transitions. PMID:27575144

  17. Correlated edge overlaps in multiplex networks

    NASA Astrophysics Data System (ADS)

    Baxter, Gareth J.; Bianconi, Ginestra; da Costa, Rui A.; Dorogovtsev, Sergey N.; Mendes, José F. F.

    2016-07-01

    We develop the theory of sparse multiplex networks with partially overlapping links based on their local treelikeness. This theory enables us to find the giant mutually connected component in a two-layer multiplex network with arbitrary correlations between connections of different types. We find that correlations between the overlapping and nonoverlapping links markedly change the phase diagram of the system, leading to multiple hybrid phase transitions. For assortative correlations we observe recurrent hybrid phase transitions.

  18. Gene-wide analyses of genome-wide association datasets: evidence for multiple common risk alleles for schizophrenia and bipolar disorder and for overlap in genetic risk

    PubMed Central

    Moskvina, V.; Craddock, N.; Holmans, P.; Nikolov, I.; Pahwa, J.S.; Green, E.; Owen, M.J.; O’Donovan, M.C.

    2014-01-01

    Genome-wide association (GWAS) analyses have identified susceptibility loci for many diseases, but most risk for any complex disorder remains un-attributed. There is therefore scope for complementary approaches to these datasets. Gene-wide approaches potentially offer additional insights. They might identify association to genes through multiple signals. Also, by providing support for genes rather than SNPs, they offer an additional opportunity to compare the results across datasets. We have undertaken gene-wide analysis of two GWAS datasets; schizophrenia and bipolar disorder. We performed two forms of analysis, one based upon the smallest p-value per gene, the other upon a truncated product of p method. For each dataset and at a range of statistical thresholds, we observed significantly more SNPs within genes (pmin for excess<0.001) showing evidence for association than expected whereas this was not true for extra-genic SNPs (pmin for excess>0.1). At a range of thresholds of significance, we also observed substantially more associated genes than expected (pmin for excess in schizophrenia =1.8×10−8, in bipolar = 2.4×10−6). Moreover, an excess of genes showed evidence for association across disorders. Among those genes surpassing thresholds highly enriched for true association, we observed evidence for association to genes reported in other GWAS datasets (CACNA1C) or to closely related family members of those genes including CSF2RB, CACNA1B, and DGKI. Our analyses show that association signals are enriched in and around genes, that large numbers of genes contribute to both disorders, and that gene-wide analyses offer useful complementary approaches to more standard methods. PMID:19065143

  19. Parametric study of the damage ring pattern in fused silica induced by multiple longitudinal modes laser pulses

    SciTech Connect

    Chambonneau, M. Grua, P.; Rullier, J.-L.; Lamaignère, L.; Natoli, J.-Y.

    2015-03-14

    With the use of multiple longitudinal modes nanosecond laser pulses at 1064 nm, laser damage sites at the exit surface of fused silica clearly and systematically exhibit ring patterns. It has been shown in our previous works that the apparent chronology of rings was closely related to the temporal shape of the laser pulses. This particular correspondence had suggested an explanation of the ring morphology formation based on the displacement of an ionization front in the surrounding air. To provide a former basis for this hypothesis and deeper understanding of ring pattern formation, additional experiments have been performed. First, the impact of fluence has been investigated, revealing that a wide variety of damage sites are produced within a very narrow fluence range; this fact involves the chronology of appearance of a surface plasma during the laser pulse. The sizes of the damage sites are proportional to the fluence of their expansion occurring between the beginning of the plasma and the end of the laser pulse. Second, specific experiments have been carried out at different angles of incidence, resulting in egg-shaped patterns rather than circular ones. This behavior can be explained by our previous hypothesis of creation of a plasma in air, its expansion being tightly conditioned by the illumination angle. This series of experiments, in which the angle of incidence is varied up to 80°, permits us to link quantitatively the working hypothesis of ionization front propagation with theoretical hydrodynamics modeling.

  20. Controlling the fast electron divergence in a solid target with multiple laser pulses.

    PubMed

    Volpe, L; Feugeas, J-L; Nicolai, Ph; Santos, J J; Touati, M; Breil, J; Batani, D; Tikhonchuk, V

    2014-12-01

    Controlling the divergence of laser-driven fast electrons is compulsory to meet the ignition requirements in the fast ignition inertial fusion scheme. It was shown recently that using two consecutive laser pulses one can improve the electron-beam collimation. In this paper we propose an extension of this method by using a sequence of several laser pulses with a gradually increasing intensity. Profiling the laser-pulse intensity opens a possibility to transfer to the electron beam a larger energy while keeping its divergence under control. We present numerical simulations performed with a radiation hydrodynamic code coupled to a reduced kinetic module. Simulation with a sequence of three laser pulses shows that the proposed method allows one to improve the efficiency of the double pulse scheme at least by a factor of 2. This promises to provide an efficient energy transport in a dense matter by a collimated beam of fast electrons, which is relevant for many applications such as ion-beam sources and could present also an interest for fast ignition inertial fusion. PMID:25615206

  1. Simultaneous SU(2) rotations on multiple quantum dot exciton qubits using a single shaped pulse

    NASA Astrophysics Data System (ADS)

    Mathew, Reuble; Yang, Hong Yi Shi; Hall, Kimberley C.

    2015-10-01

    Recent experimental demonstration of a parallel (π ,2 π ) single qubit rotation on excitons in two distant quantum dots [Nano Lett. 13, 4666 (2013), 10.1021/nl4018176] is extended in numerical simulations to the design of pulses for more general quantum state control, demonstrating the feasibility of full SU(2) rotations of each exciton qubit. Our results show that simultaneous high-fidelity quantum control is achievable within the experimentally accessible parameter space for commercial Fourier-domain pulse shaping systems. The identification of a threshold of distinguishability for the two quantum dots (QDs) for achieving high-fidelity parallel rotations, corresponding to a difference in transition energies of ˜0.25 meV , points to the possibility of controlling more than 10 QDs with a single shaped optical pulse.

  2. Simultaneous determination of three species with a single-injection step using batch injection analysis with multiple pulse amperometric detection.

    PubMed

    Freitas, Jhonys Machado; Oliveira, Thiago da Costa; Gimenes, Denise Tofanello; Munoz, Rodrigo Alejandro Abarza; Richter, Eduardo Mathias

    2016-01-01

    In this work, the possibility of simultaneous determination of three compounds with a single-injection step using batch injection analysis with multiple pulse amperometric detection (BIA-MPA) is demonstrated for the first time. A sequence of three potential pulses (+1.25 V, +1.60 V, and +1.80 V) was applied with the acquisition of three separate amperograms. 8-Chlorotheophylline was detected selectively at +1.25 V, both 8-chlorotheophylline and pyridoxine at +1.60V and 8-chlorotheophylline, pyridoxine, and diphenhydramine at +1.80 V. Subtraction between the currents detected at the three amperograms (with the help of correction factors) was used for the selective determination of pyridoxine and diphenhydramine. The proposed method is simple, inexpensive, fast (60 injections h(-1)), and present selectivity for the determination of the three compounds in pharmaceutical samples, with results similar to those obtained by HPLC (95% confidence level). PMID:26695316

  3. Overlap among Environmental Databases.

    ERIC Educational Resources Information Center

    Miller, Betty

    1981-01-01

    Describes the methodology and results of a study comparing the overlap of Enviroline, Pollution, and the Environmental Periodicals Bibliography files through searches on acid rain, asbestos and water, diesel, glass recycling, Lake Erie, Concorde, reverse osmosis wastewater treatment cost, and Calspan. Nine tables are provided. (RBF)

  4. A multiple pulse zero crossing NMR technique, and its application to F-19 chemical shift measurements in solids

    NASA Technical Reports Server (NTRS)

    Burum, D. P.; Elleman, D. D.; Rhim, W.-K.

    1978-01-01

    A simple multiple-pulse 'zero crossing technique' for accurately determining the first moment of a solid-state NMR spectrum is introduced. This technique was applied to obtain the F-19 chemical shift versus pressure curves up to 5 kbar for single crystals of CaF2 (0.29 + or - 0.02 ppm/kbar) and BaF2 (0.62 + or - 0.05 ppm/kbar). Results at ambient temperature and pressure are also reported for a number of other fluorine compounds. Because of its high data rate, this technique is potentially several orders of magnitude more sensitive than similar CW methods.

  5. Parameters of radio pulses of cloud-to-ground multiple-stroke lightning discharges in Northeast Asia

    NASA Astrophysics Data System (ADS)

    Tarabukina, L. D.; Kozlov, V. I.

    2016-05-01

    Parameters of radio pulses from multiple-stroke lightning discharges arising on the territory of Yakutia and in Transbaikalia are estimated. The number of cloud-to-ground return strokes per lightning reaches 11, on average, 4.2 (without allowance for the cases of single lightnings) for Yakutia and up to 15 for Transbaikalia. The time interval between the subsequent strokes was on average 43 ms. A peak value of signals of subsequent strokes averages 0.5 of the value for the first stroke.

  6. Refractive index modulation of Sb70Te30 phase-change thin films by multiple femtosecond laser pulses

    NASA Astrophysics Data System (ADS)

    Lei, Kai; Wang, Yang; Jiang, Minghui; Wu, Yiqun

    2016-05-01

    In this study, the controllable effective refractive index modulation of Sb70Te30 phase-change thin films between amorphous and crystalline states was achieved experimentally by multiple femtosecond laser pulses. The modulation mechanism was analyzed comprehensively by a spectral ellipsometer measurement, surface morphology observation, and two-temperature model calculations. We numerically demonstrate the application of the optically modulated refractive index of the phase-change thin films in a precisely adjustable color display. These results may provide further insights into ultrafast phase-transition mechanics and are useful in the design of programmable photonic and opto-electrical devices based on phase-change memory materials.

  7. Effects of higher-order Kerr nonlinearity and plasma diffraction on multiple filamentation of ultrashort laser pulses in air

    SciTech Connect

    Huang, T. W.; Zhou, C. T.; Zhang, H.; He, X. T.

    2013-07-15

    The effect of higher-order Kerr nonlinearity on channel formation by, and filamentation of, ultrashort laser pulses propagating in air is considered. Filament patterns originating from multiphoton ionization of the air molecules with and without the higher-order Kerr and molecular-rotation effects are investigated. It is found that diverging multiple filaments are formed if only the plasma-induced defocusing effect is included. In the presence of the higher-order Kerr effects, the light channel can exist for a long distance. The effect of noise on the filament patterns is also discussed.

  8. Effects of higher-order Kerr nonlinearity and plasma diffraction on multiple filamentation of ultrashort laser pulses in air

    NASA Astrophysics Data System (ADS)

    Huang, T. W.; Zhou, C. T.; Zhang, H.; He, X. T.

    2013-07-01

    The effect of higher-order Kerr nonlinearity on channel formation by, and filamentation of, ultrashort laser pulses propagating in air is considered. Filament patterns originating from multiphoton ionization of the air molecules with and without the higher-order Kerr and molecular-rotation effects are investigated. It is found that diverging multiple filaments are formed if only the plasma-induced defocusing effect is included. In the presence of the higher-order Kerr effects, the light channel can exist for a long distance. The effect of noise on the filament patterns is also discussed.

  9. Multiple & Overlapping Identities: The Case of Guam

    ERIC Educational Resources Information Center

    Misco, Thomas; Lee, Lena

    2012-01-01

    Schools in Guam function to Americanize immigrants by adjusting different sociocultural values to American mainstream beliefs and practices which are considered norms, such as the matters of hygiene, manners, and farming and food preparation process. However, the educators in this study manifested their different ways of understanding and an…

  10. Multiple platform application of 3D CAD PIC simulations in pulsed power

    SciTech Connect

    Peratt, A.L.; Mostrom, M.A.

    1995-12-31

    With the availability of 80--125 MHz microprocessors, the methodology developed for the simulation of problems in pulsed power and plasma physics on modern day supercomputers is now amenable to application on a wide range of platforms including laptops and workstations. While execution speeds with these processors do not match those of large scale computing machines, resources such as computer-aided-design (CAD) and graphical analysis codes are available to automate simulation setup and process data. This paper reports on the adaptation of IVORY, a three-dimensional, fully-electromagnetic, particle-in-cell simulation code, to this platform independent CAD environment. The primary purpose of this talk is to demonstrate how rapidly a pulsed power/plasma problem can be scoped out by an experimenter on a dedicated workstation. Demonstrations include a magnetically insulated transmission line, power flow in a graded insulator stack, a relativistic klystron oscillator, and the dynamics of a coaxial thruster for space applications.

  11. Non-invasive measurement of the blood pressure pulse using multiple PPGs

    NASA Astrophysics Data System (ADS)

    Seymour, John; Pennington, Gary

    Heart disease, the leading cause of death in the US, may be spotted early on by looking at photoplethysmogram (PPG) data. This experiment explores a new method of continuously monitoring the blood pressure pulse with PPG data. In contrast to the traditional sphygmomanometer (cuff) method, which yields only the systolic and diastolic pressure during measurement, this method tracks the blood pressure pulse wave in a non-invasive continuous manner. This procedure allows for fast, inexpensive, and detailed analysis of the patient's blood pressure implementable on a large scale. We also explore the second derivative of the PPG data. In combination with the above method, the patient's heart risk can be effectively detected. We acknowledge Fisher Endowment Grant support from the Jess and Mildred Fisher College of Science and Mathematics, Towson University.

  12. Analysis of the performance of a phase alternated multiple pulse sequence in spin I = 7/2 zero-field NQR spectroscopy

    NASA Astrophysics Data System (ADS)

    Ramamoorthy, A.

    Zero-field nuclear magnetic resonance spectroscopy of solids containing quadrupole nuclei usually results in broad spectral lines. This line-broadening is due mainly to the inhomogeneity of the electric field gradient (EFG) at the quadrupolar nuclear site. High resolution spectra of such solids can be obtained with the application of suitably designed multiple radiofrequency (RF) pulse sequences. The performance is reported for a periodic and cyclic phase alternated multiple RF pulse sequence (PAPS) in a spin I = 7/2 system in zero external magnetic field. Average Hamiltonian theory based on the Magnus expansion is used to solve the time-dependent Liouville-von Neumann equation of motion of the spin system under the effect of the PAPS sequence. Single transition operators are employed in the spin dynamics calculations. It is shown that the multiple pulse seqeuncearation pulse, suppresses the EFG inhomogeneity to a maximum extent when = 2 . [-- ] 2 , where is the prep1 2 2 N 1 2 1

  13. A widely expressed transcription factor with multiple DNA sequence specificity, CTCF, is localized at chromosome segment 16q22.1 within one of the smallest regions of overlap for common deletions in breast and prostate cancers.

    PubMed

    Filippova, G N; Lindblom, A; Meincke, L J; Klenova, E M; Neiman, P E; Collins, S J; Doggett, N A; Lobanenkov, V V

    1998-05-01

    The cellular protooncogene MYC encodes a nuclear transcription factor that is involved in regulating important cellular functions, including cell cycle progression, differentiation, and apoptosis. Dysregulated MYC expression appears critical to the development of various types of malignancies, and thus factors involved in regulating MYC expression may also play a key role in the pathogenesis of certain cancers. We have cloned one such MYC regulatory factor, termed CTCF, which is a highly evolutionarily conserved-11-zinc finger transcriptional factor possessing multiple DNA sequence specificity. CTCF binds to a number of important regulatory regions within the 5' noncoding sequence of the human MYC oncogene, and it can regulate its transcription in several experimental systems. CTCF mRNA is expressed in cells of multiple different lineages. Enforced ectopic expression of CTCF inhibits cell growth in culture. Southern blot analyses and fluorescence in situ hybridization (FISH) with normal human metaphase chromosomes showed that the human CTCF is a single-copy gene situated at chromosome locus 16q22. Cytogenetic studies have pointed out that chromosome abnormalities (deletions) at this locus frequently occur in many different human malignancies, suggesting the presence of one or more tumor suppressor genes in the region. To narrow down their localization, several loss of heterozygosity (LOH) studies of chromosome arm 16q in sporadic breast and prostate cancers have been carried out to define the most recurrent and smallest region(s) of overlap (SRO) for commonly deleted chromosome arm 16q material. For CTCF to be considered as a candidate tumor suppressor gene associated with tumorigenesis, it should localize within one of the SROs at 16q. Fine-mapping of CTCF has enabled us to assign the CTCF gene to about a 2 centiMorgan (cM) interval of 16q22.1 between the somatic cell hybrid breakpoints CY130(D) and CY4, which is between markers D16S186 (16AC16-101) and D16S496

  14. Generation of 20 GHz, sub-40 fs pulses at 960 nm via repetition-rate multiplication.

    PubMed

    Kirchner, M S; Braje, D A; Fortier, T M; Weiner, A M; Hollberg, L; Diddams, S A

    2009-04-01

    Optical filtering of a stabilized 1 GHz optical frequency comb produces a 20 GHz comb with approximately 40 nm bandwidth (FWHM) at 960 nm. Use of a low-finesse Fabry-Pérot cavity in a double-pass configuration provides a broad cavity coupling bandwidth (Deltalambda/lambda approximately 10%) and large suppression (50 dB) of unwanted modes. Pulse durations shorter than 40 fs with less than 2% residual amplitude modulation are achieved. PMID:19340155

  15. Application of the multiple signal classification (MUSIC) method for one-pulse burst-echo Doppler sonar data

    NASA Astrophysics Data System (ADS)

    Iwata, Tetsuo; Goto, Yoji; Susaki, Hironori

    2001-12-01

    In order to estimate ship velocity, we have applied the multiple signal classification (MUSIC) method to one-pulse burst-echo Doppler sonar data. The MUSIC method enabled us to estimate the Doppler frequency shift precisely under a low-signal-to-noise ratio (SNR) situation even from a one-pulse burst-echo signal with small data points. In simulation experiments, a signal frequency component of f = 16 Hz could be extracted from N = 128 data-point data under a 40% Gaussian-distributed additive noise with a sampling frequency fs = 2048 Hz. From actual one-pulse burst-echo signal data of N = 128 points, a Doppler frequency shift of Δf = 1.45 kHz, corresponding to a ship velocity 1.76 knots, was clearly detected, the frequency resolution of which was almost impossible to attain by the conventional Fourier transform (FFT) method. We found that the MUSIC method was useful especially for estimating the ship velocity at a very low speed.

  16. Duration of an intense laser pulse can determine the breakage of multiple chemical bonds

    NASA Astrophysics Data System (ADS)

    Xie, Xinhua; Lötstedt, Erik; Roither, Stefan; Schöffler, Markus; Kartashov, Daniil; Midorikawa, Katsumi; Baltuška, Andrius; Yamanouchi, Kaoru; Kitzler, Markus

    2015-08-01

    Control over the breakage of a certain chemical bond in a molecule by an ultrashort laser pulse has been considered for decades. With the availability of intense non-resonant laser fields it became possible to pre-determine femtosecond to picosecond molecular bond breakage dynamics by controlled distortions of the electronic molecular system on sub-femtosecond time scales using field-sensitive processes such as strong-field ionization or excitation. So far, all successful demonstrations in this area considered only fragmentation reactions, where only one bond is broken and the molecule is split into merely two moieties. Here, using ethylene (C2H4) as an example, we experimentally investigate whether complex fragmentation reactions that involve the breakage of more than one chemical bond can be influenced by parameters of an ultrashort intense laser pulse. We show that the dynamics of removing three electrons by strong-field ionization determines the ratio of fragmentation of the molecular trication into two respectively three moieties. We observe a relative increase of two-body fragmentations with the laser pulse duration by almost an order of magnitude. Supported by quantum chemical simulations we explain our experimental results by the interplay between the dynamics of electron removal and nuclear motion.

  17. Duration of an intense laser pulse can determine the breakage of multiple chemical bonds.

    PubMed

    Xie, Xinhua; Lötstedt, Erik; Roither, Stefan; Schöffler, Markus; Kartashov, Daniil; Midorikawa, Katsumi; Baltuška, Andrius; Yamanouchi, Kaoru; Kitzler, Markus

    2015-01-01

    Control over the breakage of a certain chemical bond in a molecule by an ultrashort laser pulse has been considered for decades. With the availability of intense non-resonant laser fields it became possible to pre-determine femtosecond to picosecond molecular bond breakage dynamics by controlled distortions of the electronic molecular system on sub-femtosecond time scales using field-sensitive processes such as strong-field ionization or excitation. So far, all successful demonstrations in this area considered only fragmentation reactions, where only one bond is broken and the molecule is split into merely two moieties. Here, using ethylene (C2H4) as an example, we experimentally investigate whether complex fragmentation reactions that involve the breakage of more than one chemical bond can be influenced by parameters of an ultrashort intense laser pulse. We show that the dynamics of removing three electrons by strong-field ionization determines the ratio of fragmentation of the molecular trication into two respectively three moieties. We observe a relative increase of two-body fragmentations with the laser pulse duration by almost an order of magnitude. Supported by quantum chemical simulations we explain our experimental results by the interplay between the dynamics of electron removal and nuclear motion. PMID:26271602

  18. Storage of multiple single-photon pulses emitted from a quantum dot in a solid-state quantum memory

    PubMed Central

    Tang, Jian-Shun; Zhou, Zong-Quan; Wang, Yi-Tao; Li, Yu-Long; Liu, Xiao; Hua, Yi-Lin; Zou, Yang; Wang, Shuang; He, De-Yong; Chen, Geng; Sun, Yong-Nan; Yu, Ying; Li, Mi-Feng; Zha, Guo-Wei; Ni, Hai-Qiao; Niu, Zhi-Chuan; Li, Chuan-Feng; Guo, Guang-Can

    2015-01-01

    Quantum repeaters are critical components for distributing entanglement over long distances in presence of unavoidable optical losses during transmission. Stimulated by the Duan–Lukin–Cirac–Zoller protocol, many improved quantum repeater protocols based on quantum memories have been proposed, which commonly focus on the entanglement-distribution rate. Among these protocols, the elimination of multiple photons (or multiple photon-pairs) and the use of multimode quantum memory are demonstrated to have the ability to greatly improve the entanglement-distribution rate. Here, we demonstrate the storage of deterministic single photons emitted from a quantum dot in a polarization-maintaining solid-state quantum memory; in addition, multi-temporal-mode memory with 1, 20 and 100 narrow single-photon pulses is also demonstrated. Multi-photons are eliminated, and only one photon at most is contained in each pulse. Moreover, the solid-state properties of both sub-systems make this configuration more stable and easier to be scalable. Our work will be helpful in the construction of efficient quantum repeaters based on all-solid-state devices. PMID:26468996

  19. HUNTing the Overlap

    SciTech Connect

    Iancu, Costin; Parry, Husbands; Hargrove, Paul

    2005-07-08

    Hiding communication latency is an important optimization for parallel programs. Programmers or compilers achieve this by using non-blocking communication primitives and overlapping communication with computation or other communication operations. Using non-blocking communication raises two issues: performance and programmability. In terms of performance, optimizers need to find a good communication schedule and are sometimes constrained by lack of full application knowledge. In terms of programmability, efficiently managing non-blocking communication can prove cumbersome for complex applications. In this paper we present the design principles of HUNT, a runtime system designed to search and exploit some of the available overlap present at execution time in UPC programs. Using virtual memory support, our runtime implements demand-driven synchronization for data involved in communication operations. It also employs message decomposition and scheduling heuristics to transparently improve the non-blocking behavior of applications. We provide a user level implementation of HUNT on a variety of modern high performance computing systems. Results indicate that our approach is successful in finding some of the overlap available at execution time. While system and application characteristics influence performance, perhaps the determining factor is the time taken by the CPU to execute a signal handler. Demand driven synchronization at execution time eliminates the need for the explicit management of non-blocking communication. Besides increasing programmer productivity, this feature also simplifies compiler analysis for communication optimizations.

  20. Dissipative rogue wave generation in multiple-pulsing mode-locked fiber laser

    NASA Astrophysics Data System (ADS)

    Lecaplain, C.; Grelu, Ph; Soto-Crespo, J. M.; Akhmediev, N.

    2013-06-01

    Following the first experimental observation of a new mechanism leading to optical rogue wave (RW) formation briefly reported in Lecaplain et al (2012 Phys. Rev. Lett. 108 233901), we provide an extensive study of the experimental conditions under which these RWs can be detected. RWs originate from the nonlinear interactions of bunched chaotic pulses that propagate in a fiber laser cavity, and manifest as rare events of high optical intensity. The crucial influence of the electrical detection bandwidth is illustrated. We also clarify the observation of RWs with respect to other pulsating regimes, such as Q-switching instability, that also lead to L-shaped probability distribution functions.

  1. Spatial evolution of multiple filaments in air induced by femtosecond laser pulses.

    PubMed

    Hao, Zuo-Qiang; Zhang, Jie; Lu, Xin; Xi, Ting-Ting; Li, Yu-Tong; Yuan, Xiao-Hui; Zheng, Zhi-Yuan; Wang, Zhao-Hua; Ling, Wei-Jun; Wei, Zhi-Yi

    2006-01-23

    The spatial evolution of plasma filaments in air induced by femtosecond laser pulses is investigated experimentally. Several major filaments and small scaled additional filaments are detected in the plasma channel. The complicated interaction process of filaments as splitting, fusion and spreading is observed. The major filaments propagate stably, and the small scaled additional filaments can be attracted to the major filaments and merged with them. The major filaments are formed due to the perturbation of initial beam profile and the small scaled filaments are mainly caused by the transverse modulational instability. PMID:19503396

  2. Transistorized Marx bank pulse circuit provides voltage multiplication with nanosecond rise-time

    NASA Technical Reports Server (NTRS)

    Jung, E. A.; Lewis, R. N.

    1968-01-01

    Base-triggered avalanche transistor circuit used in a Marx bank pulser configuration provides voltage multiplication with nanosecond rise-time. The avalanche-mode transistors replace conventional spark gaps in the Marx bank. The delay time from an input signal to the output signal to the output is typically 6 nanoseconds.

  3. Characterization of multiple twinned structural units in pulse-electrodeposited nickel

    NASA Astrophysics Data System (ADS)

    Klement, U.; Kahrimanidis, A.; Yao, Y.

    2015-04-01

    The investigation was performed on pulse-electrodeposited Nickel with submicrocrystalline microstructure containing slightly elongated grains having a <110> fibre texture in growth direction. Structural units in form of groups of elongated grains possessing a common <110>-zone axis in growth direction and CSL boundaries (in some cases twins) between them have been found in the microstructure by use of EBSD. Grain growth sets in above 325°C but the texture is conserved up to at least 600°C. This means that the arrangement of twins and other CSL boundaries stabilized the structural units; there is no orientation change (by further twinning) when grain growth occurs as seen in previous studies on Ni and Ni-Fe of different initial texture. The observed structural units were characterized in detail and the occurring grains and grain boundaries are described.

  4. Gamma-ray pulse height spectrum analysis on systems with multiple Ge detectors using a spectrum summing

    SciTech Connect

    Killian, E.W.

    1997-05-01

    A technique has been developed at the Idaho National Engineering Laboratory to sum high resolution gamma-ray pulse spectra from systems with multiple Ge detectors. Lockheed Martin Idaho Technologies Company operates a multi-detector spectrometer configuration at the Stored Waste Examination Pilot Plant facility which is used to characterize the radio nuclide contents in waste drums destined for shipment to Waste Isolation Pilot Plant. This summing technique was developed to increase the sensitivity of the system, reduce the count times required to properly quantify the radionuclides and provide a more consistent methodology for combining data collected from multiple detectors. In spectrometer systems with multiple detectors looking at non homogenous waste forms it is often difficult to combine individual spectrum analysis results from each detector to obtain a meaningful result for the total waste container. This is particularly true when the counting statistics in each individual spectrum are poor. The spectrum summing technique adds the spectra collected by each detector into a single spectrum which has better counting statistics than each individual spectrum. A normal spectral analysis program can then be used to analyze the sum spectrum to obtain radio nuclide values which have smaller errors and do not have to be further manipulated to obtain results for the total waste container.

  5. Use of spatial time-division repetition rate multiplication of mode-locked laser pulses to generate microwave radiation from optoelectronic switches

    NASA Astrophysics Data System (ADS)

    Mooradian, A.

    1984-09-01

    An all-optical technique is described which can substantially increase the pulse repetition rate of the output from any mode-locked laser. Multiplication of the repetition rate by a factor of 16 has been demonstrated. A mode-locked laser pulse train multiplied up to a 2-GHz repetition rate has been used to generate microwave radiation by means of a GaAs avalanche photodiode as well as an Fe:InP optoelectronic switch.

  6. Multiple Scattering of Laser Pulses in Snow Over Ice: Modeling the Potential Bias in ICESat Altimetry

    NASA Technical Reports Server (NTRS)

    Davis, A. B.; Varnai, T.; Marshak, A.

    2010-01-01

    The primary goal of NASA's current ICESat and future ICESat2 missions is to map the altitude of the Earth's land ice with high accuracy using laser altimetry technology, and to measure sea ice freeboard. Ice however is a highly transparent optical medium with variable scattering and absorption properties. Moreover, it is often covered by a layer of snow with varying depth and optical properties largely dependent on its age. We describe a modeling framework for estimating the potential altimetry bias caused by multiple scattering in the layered medium. We use both a Monte Carlo technique and an analytical diffusion model valid for optically thick media. Our preliminary numerical results are consistent with estimates of the multiple scattering delay from laboratory measurements using snow harvested in Greenland, namely, a few cm. Planned refinements of the models are described.

  7. CdTe-Cd1 - xMnxTe multiple quantum well structures grown by pulsed laser evaporation and epitaxy

    NASA Astrophysics Data System (ADS)

    Dubowski, J. J.; Roth, A. P.; Wasilewski, Z. R.; Rolfe, S. J.

    1991-09-01

    Structural and optical properties of (001) CdTe-Cd1-xMnxTe (x=0.10) multiple quantum well structures grown by pulsed laser evaporation and epitaxy (PLEE) are investigated. The layers are grown on (001) CdZnTe wafers held at a temperature in the range of 210-230 °C. Secondary-ion mass spectroscopy in-depth profiles reveal that highly uniform structures are grown. Numerical analysis of double crystal x-ray diffraction results demonstrates high structural quality of the layers and indicates partial relaxation of the strain in these structures. Low-temperature photoluminescence exhibits excitonic recombinations in the CdTe wells whereas photoluminescence from the Cd1-xMnxTe barriers is not observed. The chemical composition of the barriers deduced from photoluminescence is in excellent agreement with the intended chemical composition set during growth.

  8. Photonic reagents for concentration measurement of flu-orescent proteins with overlapping spectra

    PubMed Central

    Goun, Alexei; Bondar, Denys I.; Er, Ali O.; Quine, Zachary; Rabitz, Herschel A.

    2016-01-01

    By exploiting photonic reagents (i.e., coherent control by shaped laser pulses), we employ Optimal Dynamic Discrimination (ODD) as a novel means for quantitatively characterizing mixtures of fluorescent proteins with a large spectral overlap. To illustrate ODD, we simultaneously measured concentrations of in vitro mixtures of Enhanced Blue Fluorescent Protein (EBFP) and Enhanced Cyan Fluorescent Protein (ECFP). Building on this foundational study, the ultimate goal is to exploit the capabilities of ODD for parallel monitoring of genetic and protein circuits by suppressing the spectral cross-talk among multiple fluorescent reporters. PMID:27181496

  9. Photonic reagents for concentration measurement of flu-orescent proteins with overlapping spectra.

    PubMed

    Goun, Alexei; Bondar, Denys I; Er, Ali O; Quine, Zachary; Rabitz, Herschel A

    2016-01-01

    By exploiting photonic reagents (i.e., coherent control by shaped laser pulses), we employ Optimal Dynamic Discrimination (ODD) as a novel means for quantitatively characterizing mixtures of fluorescent proteins with a large spectral overlap. To illustrate ODD, we simultaneously measured concentrations of in vitro mixtures of Enhanced Blue Fluorescent Protein (EBFP) and Enhanced Cyan Fluorescent Protein (ECFP). Building on this foundational study, the ultimate goal is to exploit the capabilities of ODD for parallel monitoring of genetic and protein circuits by suppressing the spectral cross-talk among multiple fluorescent reporters. PMID:27181496

  10. Photonic reagents for concentration measurement of flu-orescent proteins with overlapping spectra

    NASA Astrophysics Data System (ADS)

    Goun, Alexei; Bondar, Denys I.; Er, Ali O.; Quine, Zachary; Rabitz, Herschel A.

    2016-05-01

    By exploiting photonic reagents (i.e., coherent control by shaped laser pulses), we employ Optimal Dynamic Discrimination (ODD) as a novel means for quantitatively characterizing mixtures of fluorescent proteins with a large spectral overlap. To illustrate ODD, we simultaneously measured concentrations of in vitro mixtures of Enhanced Blue Fluorescent Protein (EBFP) and Enhanced Cyan Fluorescent Protein (ECFP). Building on this foundational study, the ultimate goal is to exploit the capabilities of ODD for parallel monitoring of genetic and protein circuits by suppressing the spectral cross-talk among multiple fluorescent reporters.

  11. Modeling the effect of native and laser-induced states on the dielectric breakdown of wide band gap optical materials by multiple subpicosecond laser pulses

    SciTech Connect

    Emmert, Luke A.; Mero, Mark; Rudolph, Wolfgang

    2010-08-15

    A model for the multiple-pulse laser-induced breakdown behavior of dielectrics is presented. It is based on a critical conduction band (CB) electron density leading to dielectric breakdown. The evolution of the CB electron density during the pulse train is calculated using rate equations involving transitions between band and mid-gap states (native and laser-induced). Using realistic estimations for the trap density and ionization cross-section, the model is able to reproduce the experimentally observed drop in the multiple-pulse damage threshold relative to the single-pulse value, as long as the CB electron density is controlled primarily by avalanche ionization seeded by multiphoton ionization of the traps and the valence band. The model shows that at long pulse duration, the breakdown threshold becomes more sensitive to presence of traps close (within one photon energy) to the CB. The effect of native and laser-induced defects can be distinguished by their saturation behavior. Finally, measurements of the multiple-pulse damage threshold of hafnium oxide films are used to illustrate the application of the model.

  12. Multiple scavengers respond rapidly to pulsed carrion resources at the land-ocean interface

    NASA Astrophysics Data System (ADS)

    Schlacher, Thomas A.; Strydom, Simone; Connolly, Rod M.

    2013-04-01

    Sandy beaches are the globe's longest interface region between the oceans and the continents, forming highly permeable boundaries across which matter flows readily. Stranded marine carrion supplies a high-quality food source to scavengers, but the role of animal carcasses is generally under-reported in sandy-beach food webs. We examined the response of scavengers to pulsed subsidies in the form of experimental additions of fish carcasses to the dune-beach interface in eastern Australia. Ghost crabs (Ocypode spp.) are the dominant invertebrate scavengers in these habitats and they responded strongly and consistently to changed resource availability: densities increased significantly within days of carrion augmentations. Carcasses added experimentally also formed local nuclei for a diversity of vertebrate scavengers that aggregated at food falls; these included large lizards, several species of birds (including raptors), and foxes. Consumption of fish carrion by the vertebrate scavengers was rapid and often complete. There is also evidence for higher-order interactions, where responses of invertebrate scavengers became depressed in plots where vertebrate scavenger activity was intense. Our findings emphasize that carrion can be a pivotal component of beach food webs.

  13. Direct spectroscopic observation of multiple-charged-ion acceleration by an intense femtosecond-pulse laser.

    PubMed

    Zhidkov, A G; Sasaki, A; Tajima, T; Auguste, T; D'Olivera, P; Hulin, S; Monot, P; Faenov, A Y; Pikuz, T A; Skobelev, I Y

    1999-09-01

    We have observed evidence of the emission of energetic He-and H-like ions of fluorine more than 1 MeV produced via the optical field ionization (OFI) from a solid target irradiated by an intense I=(2-4)x10(18) W/cm(2) (60 fs, lambda=800 nm), obliquely incident p-polarized pulse laser. The measured blue wing of He(alpha), He(beta), and Ly(alpha) lines of fluorine shows a feature of the Doppler-shifted spectrum due to the self-similar ion expansion dominated by superthermal electrons with the temperature T(h) approximately 100 keV. Using a collisional particle-in-cell simulation, which incorporates the nonlocal-thermodynamic-equilibrium ionization including OFI, we have obtained the plasma temperature, line shape, and maximal energy of accelerated ions, which agree well with those determined from the experimental spectra. The red wing of ion spectra gives the temperature of bulk plasma electrons. PMID:11970139

  14. Overlap extension PCR cloning.

    PubMed

    Bryksin, Anton; Matsumura, Ichiro

    2013-01-01

    Rising demand for recombinant proteins has motivated the development of efficient and reliable cloning methods. Here we show how a beginner can clone virtually any DNA insert into a plasmid of choice without the use of restriction endonucleases or T4 DNA ligase. Chimeric primers encoding plasmid sequence at the 5' ends and insert sequence at the 3' ends are designed and synthesized. Phusion(®) DNA polymerase is utilized to amplify the desired insert by PCR. The double-stranded product is subsequently employed as a pair of mega-primers in a PCR-like reaction with circular plasmids. The original plasmids are then destroyed in restriction digests with Dpn I. The product of the overlap extension PCR is used to transform competent Escherichia coli cells. Phusion(®) DNA polymerase is used for both the amplification and fusion reactions, so both steps can be monitored and optimized in the same way. PMID:23996437

  15. Detecting overlapping communities in massive networks

    NASA Astrophysics Data System (ADS)

    Sun, Bing-Jie; Shen, Hua-Wei; Cheng, Xue-Qi

    2014-12-01

    Community detection is an essential work for network analysis. However, few methods could be used as off-the-shelf tools to detect communities in real-world networks for two main reasons: Real networks often contain millions of nodes or even hundreds of millions of nodes while most methods cannot handle networks at this scale. One node often belongs to multiple communities, posing another big challenge. In this paper, we circumvent the tricky problem of detecting overlapping communities using a two-stage framework, balancing efficiency and accuracy. Given a network, we first focus on efficiently finding its coarse-grained communities. Starting from them, we next obtain overlapping communities by optimizing a principled objective function. In this divide-and-conquer way, the framework achieves a much better performance than detecting overlapping communities from scratch. Extensive tests on synthetic and real networks demonstrate that it outperforms state-of-the-art methods in terms of both efficiency and accuracy.

  16. Petrogenesis of the Elephant Moraine A79001 meteorite Multiple magma pulses on the shergottite parent body

    NASA Technical Reports Server (NTRS)

    Mcsween, H. Y., Jr.; Jarosewich, E.

    1983-01-01

    The EETA 79001 achondrite consists of two distinct igneous lithologies joined along a planar, non-brecciated contact. Both are basaltic rocks composed primarily of pigeonite, augite, and maskelynite, but one contains zoned megacrysts of olivine, orthopyroxene, and chromite that represent disaggregated xenoliths of harzburzite. Both lithologies probably formed from successive volcanic flows or multiple injections of magma into a small, shallow chamber. Many similarities between the two virtually synchronous magmas suggest that they are related. Possible mechanisms to explain their differences involve varying degrees of assimilation, fractionation from similar parental magmas, or partial melting of a similar source peridotite; of these, assimilation of the observed megacryst assemblage seems most plausible. However, some isotopic contamination may be required in any of these petrogenetic models. The meteorite has suffered extensive shock metamorphism and localized melting during a large impact event that probably excavated and liberated it from its parent body.

  17. Lack of Association between Pulse Steroid Therapy and Bone Mineral Density in Patients with Multiple Sclerosis

    PubMed Central

    Zengin Karahan, Serap; Boz, Cavit; Kilic, Sevgi; Can Usta, Nuray; Ozmenoglu, Mehmet; Altunayoglu Cakmak, Vildan; Gazioglu, Sibel

    2016-01-01

    Multiple sclerosis (MS) has been associated with reduced bone mineral density (BMD). The purpose of this study was to determine the possible factors affecting BMD in patients with MS. We included consecutive 155 patients with MS and 90 age- and sex-matched control subjects. Patients with MS exhibited significantly lower T-scores and Z-scores in the femoral neck and trochanter compared to the controls. Ninety-four (61%) patients had reduced bone mass in either the lumbar spine or the femoral neck; of these, 64 (41.3%) had osteopenia and 30 (19.4%) had osteoporosis. The main factors affecting BMD were disability, duration of MS, and smoking. There was a negative relationship between femoral BMD and EDSS and disease duration. No association with lumbar BMD was determined. There were no correlations between BMD at any anatomic region and cumulative corticosteroid dose. BMD is significantly lower in patients with MS than in healthy controls. Reduced BMD in MS is mainly associated with disability and duration of the disease. Short courses of high dose steroid therapy did not result in an obvious negative impact on BMD in the lumbar spine and femoral neck in patients with MS. PMID:26966578

  18. Arsia Mons Overlapping Flows

    NASA Technical Reports Server (NTRS)

    2005-01-01

    [figure removed for brevity, see original site]

    This VIS image shows overlapping flows with different suface textures. In the middle of the image there is a round, darker feature -- a small volcano. To the left of the volcano a graben cuts across the lava flows.

    Image information: VIS instrument. Latitude -18.5, Longitude 244.5 East (115.5 West). 17 meter/pixel resolution.

    Note: this THEMIS visual image has not been radiometrically nor geometrically calibrated for this preliminary release. An empirical correction has been performed to remove instrumental effects. A linear shift has been applied in the cross-track and down-track direction to approximate spacecraft and planetary motion. Fully calibrated and geometrically projected images will be released through the Planetary Data System in accordance with Project policies at a later time.

    NASA's Jet Propulsion Laboratory manages the 2001 Mars Odyssey mission for NASA's Office of Space Science, Washington, D.C. The Thermal Emission Imaging System (THEMIS) was developed by Arizona State University, Tempe, in collaboration with Raytheon Santa Barbara Remote Sensing. The THEMIS investigation is led by Dr. Philip Christensen at Arizona State University. Lockheed Martin Astronautics, Denver, is the prime contractor for the Odyssey project, and developed and built the orbiter. Mission operations are conducted jointly from Lockheed Martin and from JPL, a division of the California Institute of Technology in Pasadena.

  19. Oxygen evolution from single- and multiple-turnover light pulses: temporal kinetics of electron transport through PSII in sunflower leaves.

    PubMed

    Oja, Vello; Eichelmann, Hillar; Laisk, Agu

    2011-12-01

    Oxygen evolution per single-turnover flash (STF) or multiple-turnover pulse (MTP) was measured with a zirconium O(2) analyzer from sunflower leaves at 22 °C. STF were generated by Xe arc lamp, MTP by red LED light of up to 18000 μmol quanta m(-2) s(-1). Ambient O(2) concentration was 10-30 ppm, STF and MTP were superimposed on far-red background light in order to oxidize plastoquinone (PQ) and randomize S-states. Electron (e(-)) flow was calculated as 4 times O(2) evolution. Q (A) → Q (B) electron transport was investigated firing double STF with a delay of 0 to 2 ms between the two. Total O(2) evolution per two flashes equaled to that from a single flash when the delay was zero and doubled when the delay exceeded 2 ms. This trend was fitted with two exponentials with time constants of 0.25 and 0.95 ms, equal amplitudes. Illumination with MTP of increasing length resulted in increasing O(2) evolution per pulse, which was differentiated with an aim to find the time course of O(2) evolution with sub-millisecond resolution. At the highest pulse intensity of 2.9 photons ms(-1) per PSII, 3 e(-) initially accumulated inside PSII and the catalytic rate of PQ reduction was determined from the throughput rate of the fourth and fifth e(-). A light response curve for the reduction of completely oxidized PQ was a rectangular hyperbola with the initial slope of 1.2 PSII quanta per e(-) and V (m) of 0.6 e(-) ms(-1) per PSII. When PQ was gradually reduced during longer MTP, V (m) decreased proportionally with the fraction of oxidized PQ. It is suggested that the linear kinetics with respect to PQ are apparent, caused by strong product inhibition due to about equal binding constants of PQ and PQH(2) to the Q (B) site. The strong product inhibition is an appropriate mechanism for down-regulation of PSII electron transport in accordance with rate of PQH(2) oxidation by cytochrome b(6)f. PMID:22038184

  20. Temperature dependent photoluminescence from ZnO/MgZnO multiple quantum wells grown by pulsed laser deposition

    NASA Astrophysics Data System (ADS)

    Misra, P.; Sharma, T. K.; Kukreja, L. M.

    2007-07-01

    We have studied temperature dependent photoluminescence (PL) from ZnO Multiple Quantum Wells (MQWs) of different well layer thicknesses in the range ˜1-4 nm grown on (0001) sapphire by a novel in-house developed buffer assisted pulsed laser deposition. At 10 K the PL peak shifted toward blue with decreasing well layer thickness and at constant well layer thickness the PL peak shifted towards red with increasing temperature. To the best of our knowledge we have observed for the first time an efficient room temperature (RT) PL emanating from such MQWs. The red shift of the PL peak with increasing temperature has been found to be due to the band gap shrinkage in accordance with the Varshni's empirical relation. The spectral linewidth was found to increase with increasing temperature due to the scattering of excitons with acoustic and optical phonons in different temperature regimes. Both at RT and at 10 K the PL peak shifted with respect to the well layer thickness in the range of ˜3.35-˜3.68 eV with decreasing thickness in agreement with the calculated values.

  1. Influence of driving frequency on discharge modes in a dielectric-barrier discharge with multiple current pulses

    SciTech Connect

    Jiang, Weiman; Tang, Jie; Wang, Yishan; Zhao, Wei; Duan, Yixiang

    2013-07-15

    A one-dimensional self-consistent fluid model was employed to investigate the effect of the driving frequency on the discharge modes in atmospheric-pressure argon discharge with multiple current pulses. The discharge mode was discussed in detail not only at current peaks but also between two adjacent peaks. The simulation results show that different transitions between the Townsend and glow modes during the discharge take place with the driving frequency increased. A complicated transition from the Townsend mode, through glow, Townsend, and glow, and finally back to the Townsend one is found in the discharge with the driving frequency of 8 kHz. There is a tendency of transition from the Townsend to glow mode for the discharge both at the current peaks and troughs with the increasing frequency. The discharge in the half period can all along operate in the glow mode with the driving frequency high enough. This is resulted from the preservation of more electrons in the gas gap and acquisition of more electron energy from the swiftly varying electric field with the increase in driving frequency. Comparison of the spatial and temporal evolutions of the electron density at different driving frequencies indicates that the increment of the driving frequency allows the plasma chemistry to be enhanced. This electrical characteristic is important for the applications, such as surface treatment and biomedical sterilization.

  2. Improvement of the atmospheric discharge laser-triggered ability using multiple pulses from a kilohertz KrF laser

    SciTech Connect

    Yamaura, Michiteru

    2005-08-15

    The potential ability of lasers to control lightning can be improved by using a train of pulses with submillisecond separations. Laser-triggered experiments in a small-scale (10-mm gap) atmospheric discharge facility show that the triggering is dramatically enhanced when a five-pulse train of sub-Joule energy is used instead of a single pulse. This effect increases rapidly as the pulse interval is reduced. It appears that at a submillisecond pulse interval, sufficient positive and negative ions survive in subsequent pulses, thus enabling easy deionization. Hence, significant plasma buildup occurs from one pulse to the next. However, this persistence of ions would appear to imply that the rate of recombination (effectively a charge transfer between ions) is considerably lower than previously believed.

  3. Subsurface modifications in indium phosphide induced by single and multiple femtosecond laser pulses: A study on the formation of periodic ripples

    SciTech Connect

    Couillard, M.; Borowiec, A.; Haugen, H. K.; Preston, J. S.; Griswold, E. M.; Botton, G. A.

    2007-02-01

    We use cross-sectional transmission electron microscopy to study the damage induced below the surface of indium phosphide (InP) samples by single and multiple femtosecond laser pulses with a photon energy lower than the InP band gap. Single-pulse irradiation creates a {approx}100 nm deep crater with a resolidified surface layer consisting of quasiamorphous indium phosphide. The resolidified layer has a thickness of {approx}60 nm at the center and extends laterally beyond the edge of the crater rim. Exposure to multiple femtosecond pulses of 2050 nm center wavelength results in the formation of laser-induced periodic surface structures (LIPSS) with two different periods, one ({approx}1730 nm) less than but close to the laser wavelength and one ({approx}470 nm) four times smaller. Segregation beneath both types of ripples leads to the formation of In-rich particles embedded in the resolidified surface layer. Extended defects are detected only below the center of the multiple-pulse crater and their distribution appears to be correlated with the LIPSS modulation. Finally, LIPSS formation is discussed in terms of the observed subsurface microstructures.

  4. Overlapping clusters for distributed computation.

    SciTech Connect

    Mirrokni, Vahab; Andersen, Reid; Gleich, David F.

    2010-11-01

    Scalable, distributed algorithms must address communication problems. We investigate overlapping clusters, or vertex partitions that intersect, for graph computations. This setup stores more of the graph than required but then affords the ease of implementation of vertex partitioned algorithms. Our hope is that this technique allows us to reduce communication in a computation on a distributed graph. The motivation above draws on recent work in communication avoiding algorithms. Mohiyuddin et al. (SC09) design a matrix-powers kernel that gives rise to an overlapping partition. Fritzsche et al. (CSC2009) develop an overlapping clustering for a Schwarz method. Both techniques extend an initial partitioning with overlap. Our procedure generates overlap directly. Indeed, Schwarz methods are commonly used to capitalize on overlap. Elsewhere, overlapping communities (Ahn et al, Nature 2009; Mishra et al. WAW2007) are now a popular model of structure in social networks. These have long been studied in statistics (Cole and Wishart, CompJ 1970). We present two types of results: (i) an estimated swapping probability {rho}{infinity}; and (ii) the communication volume of a parallel PageRank solution (link-following {alpha} = 0.85) using an additive Schwarz method. The volume ratio is the amount of extra storage for the overlap (2 means we store the graph twice). Below, as the ratio increases, the swapping probability and PageRank communication volume decreases.

  5. Exploration of pulse timing for multiple laser hits within a combined heat transfer, phase change, and gas dynamics model for laser ablation

    NASA Astrophysics Data System (ADS)

    Mullenix, Nathan; Povitsky, Alex

    2007-05-01

    Laser ablation involves heat transfer, phase changes and/or chemical reactions, and gas dynamics. All three of these processes are tightly coupled with each other. A model has previously been developed to simulate the nanosecond scale laser ablation of carbon. This model has been extended to accommodate longer term simulations and multiple laser pulses. The effects of varying the timing of a second laser pulse by tens of nanoseconds are explored. It is shown that by changing this interval one can control the total mass ablated and the mass transfer rate.

  6. Multiple-quantum NMR in solids

    NASA Astrophysics Data System (ADS)

    Yen, Yu-Sze; Pines, A.

    1983-03-01

    Multiple-quantum NMR has typically been observed in small groups of spins in isolated molecules. Due to the profusion of spin transitions in a solid, individual lines are unresolved. Excitation of high quantum transitions by normal schemes is thus difficult. To ensure that overlapping lines add constructively and to enhance sensitivity, time-reversal pulse sequences are used to generate all lines in phase. Up to 22-quantum 1H absorption in solid adamantane is observed.

  7. Multiple-quantum NMR in solids

    SciTech Connect

    Yen, Y.; Pines, A.

    1983-03-15

    Multiple-quantum NMR has typically been observed in small groups of spins in isolated molecules. Due to the profusion of spin transitions in a solid, individual lines are unresolved. Excitation of high quantum transitions by normal schemes is thus difficult. To ensure that overlapping lines add constructively and to enhance sensitivity, time-reversal pulse sequences are used to generate all lines in phase. Up to 22-quantum /sup 1/H absorption in solid adamantane is observed.

  8. Origin of the giant Allard Lake ilmenite ore deposit (Canada) by fractional crystallization, multiple magma pulses and mixing

    NASA Astrophysics Data System (ADS)

    Charlier, Bernard; Namur, Olivier; Malpas, Simon; de Marneffe, Cédric; Duchesne, Jean-Clair; Vander Auwera, Jacqueline; Bolle, Olivier

    2010-06-01

    The late-Proterozoic Allard Lake ilmenite deposit is located in the Havre-Saint-Pierre anorthosite complex, part of the allochtonous polycyclic belt of the Grenville Province. Presently the world's largest Fe-Ti oxide deposit, it had a pre-mining amount in excess of 200 Mt at grades over 60 wt.% hemo-ilmenite. The main ore body is a funnel-shaped intrusion, measuring 1.03 × 1.10 km and 100-300 m-thick. Two smaller bodies are separated by faults and anorthosite. The ore is an ilmenite-rich norite (or ilmenitite) made up of hemo-ilmenite (Hem 22.6-29.4, 66.2 wt.% on average), andesine plagioclase (An 45-50), aluminous spinel and locally orthopyroxene. Whole-rock chemical compositions are controlled by the proportions of ilmenite and plagioclase ± orthopyroxene which supports the cumulate origin of the deposit. Ore-forming processes are further constrained by normal and reverse fractionation trends of Cr concentration in cumulus ilmenite that reveal multiple magma emplacements and alternating periods of fractional crystallization and magma mixing. Mixing of magmas produced hybrids located in the stability field of ilmenite resulted in periodic crystallization of ilmenite alone. The unsystematic differentiation trends in the Allard Lake deposit, arising from a succession of magma pulses, hybridisation, and the fractionation of hemo-ilmenite alone or together with plagioclase suggest that the deposit formed within a magma conduit. This dynamic emplacement mechanism associated with continuous gravity driven accumulation of Fe-Ti oxides and possibly plagioclase buoyancy in a fractionating ferrobasalt explains the huge concentration of hemo-ilmenite. The occurrence of sapphirine associated with aluminous spinel and high-alumina orthopyroxene (7.6-9.1 wt.% Al 2O 3) lacking exsolved plagioclase supports the involvement of a metamorphic overprint during the synchronous Ottawan orogeny, which is also responsible for strong textural equilibration and external granule of

  9. Transcranial pulsed electromagnetic fields for multiple chemical sensitivity: study protocol for a randomized, double-blind, placebo-controlled trial

    PubMed Central

    2013-01-01

    Background Multiple chemical sensitivity (MCS) is a chronic condition of unknown etiology. MCS is characterized by recurrent nonspecific symptoms from multiple organ systems in response to chemical exposures in concentrations that are normally tolerated by the majority of the population. The symptoms may have severe impact on patients’ lives, but an evidence-based treatment for the condition is nonexisting. The pathophysiology is unclarified, but several indicators point towards abnormal processing of sensory signals in the central nervous system. Pulsed electromagnetic fields (PEMF) offer a promising new treatment for refractory depression and can be targeted at the brain, thereby activating biochemical cell processes. Methods/Design In a parallel, randomized, double-blind, placebo-controlled trial conducted at the Danish Research Centre for Chemical Sensitivities, the effects of PEMF in MCS patients will be assessed using the Re5 Independent System. Based on sample size estimation, 40 participants will be randomized to either PEMF therapy or placebo. The allocation sequence will be generated by computer. All involved parties (that is, participants, investigators, the research nurse, and the statistician) will be blinded to group allocation. The participants will receive PEMF therapy or placebo applied transcranially 30 minutes twice a day for 7 days a week over 6 consecutive weeks. Outcomes will be measured at baseline, once weekly during treatment, post treatment, and at 2.5-month and 4.5-month follow-up according to a predefined timetable. The primary outcome will be a measurement of the impact of MCS on everyday life. The secondary outcomes will be measurements of MCS symptoms, psychological distress (stress, anxiety or depressive symptoms), capsaicin-induced secondary punctate hyperalgesia, immunological markers in serum, and quality of life. Discussion This trial will assess the effects of PEMF therapy for MCS. Currently, there is no treatment with a

  10. Colliding Laser Pulses for Laser-Plasma Accelerator Injection Control

    SciTech Connect

    Plateau, G. R.; Geddes, C. G. R.; Matlis, N. H.; Mittelberger, D. E.; Nakamura, K.; Schroeder, C. B.; Esarey, E.; Leemans, W. P.; Cormier-Michel, E.

    2010-11-04

    Decoupling injection from acceleration is a key challenge to achieve compact, reliable, tunable laser-plasma accelerators (LPA). In colliding pulse injection the beat between multiple laser pulses can be used to control energy, energy spread, and emittance of the electron beam by injecting electrons in momentum and phase into the accelerating phase of the wake trailing the driver laser pulse. At LBNL, using automated control of spatiotemporal overlap of laser pulses, two-pulse experiments showed stable operation and reproducibility over hours of operation. Arrival time of the colliding beam was scanned, and the measured timing window and density of optimal operation agree with simulations. The accelerator length was mapped by scanning the collision point.

  11. Colliding Laser Pulses for Laser-Plasma Accelerator Injection Control

    NASA Astrophysics Data System (ADS)

    Plateau, G. R.; Geddes, C. G. R.; Matlis, N. H.; Cormier-Michel, E.; Mittelberger, D. E.; Nakamura, K.; Schroeder, C. B.; Esarey, E.; Leemans, W. P.

    2010-11-01

    Decoupling injection from acceleration is a key challenge to achieve compact, reliable, tunable laser-plasma accelerators (LPA) [1, 2]. In colliding pulse injection the beat between multiple laser pulses can be used to control energy, energy spread, and emittance of the electron beam by injecting electrons in momentum and phase into the accelerating phase of the wake trailing the driver laser pulse [3, 4, 5, 6, 7]. At LBNL, using automated control of spatiotemporal overlap of laser pulses, two-pulse experiments showed stable operation and reproducibility over hours of operation. Arrival time of the colliding beam was scanned, and the measured timing window and density of optimal operation agree with simulations [8]. The accelerator length was mapped by scanning the collision point.

  12. Rapid frequency control of sonar sounds by the FM bat, Miniopterus fuliginosus, in response to spectral overlap.

    PubMed

    Hase, Kazuma; Miyamoto, Takara; Kobayasi, Kohta I; Hiryu, Shizuko

    2016-07-01

    In the presence of multiple flying conspecifics, echolocating bats avoid jamming by adjusting the spectral and/or temporal features of their vocalizations. However, little is known about how bats alter their pulse acoustic characteristics to adapt to an acoustically jamming situation during flight. We investigated echolocation behavior in a bat (Miniopterus fuliginosus) during free flight under acoustic jamming conditions created by downward FM jamming sounds mimicking bat echolocation sounds. In an experimental chamber, the flying bat was exposed to FM jamming sounds with different terminal frequencies (TFs) from loudspeakers. Echolocation pulses emitted by the flying bat were recorded using a telemetry microphone (Telemike) mounted on the back of the bat. The bats immediately (within 150ms) shifted the TFs of emitted pulses upward when FM jamming sounds were presented. Moreover, the amount of upward TF shift differed depending on the TF ranges of the jamming sounds presented. When the TF range was lower than or overlapped the bat's mean TF, the bat TF shifted significantly upward (by 1-2kHz, Student's t-test, P<0.05), corresponding to 3-5% of the total bandwidth of their emitted pulses. These findings indicate that bats actively avoid overlap of the narrow frequency band around the TF. PMID:27157002

  13. On the Neuberger overlap operator

    NASA Astrophysics Data System (ADS)

    Boriçi, Artan

    1999-04-01

    We compute Neuberger's overlap operator by the Lanczos algorithm applied to the Wilson-Dirac operator. Locality of the operator for quenched QCD data and its eigenvalue spectrum in an instanton background are studied.

  14. Multiple nanosecond electric pulses increase the number but not the size of long-lived nanopores in the cell membrane.

    PubMed

    Pakhomov, Andrei G; Gianulis, Elena; Vernier, P Thomas; Semenov, Iurii; Xiao, Shu; Pakhomova, Olga N

    2015-04-01

    Exposure to intense, nanosecond-duration electric pulses (nsEP) opens small but long-lived pores in the plasma membrane. We quantified the cell uptake of two membrane integrity marker dyes, YO-PRO-1 (YP) and propidium (Pr) in order to test whether the pore size is affected by the number of nsEP. The fluorescence of the dyes was calibrated against their concentrations by confocal imaging of stained homogenates of the cells. The calibrations revealed a two-phase dependence of Pr emission on the concentration (with a slower rise at<4μM) and a linear dependence for YP. CHO cells were exposed to nsEP trains (1 to 100 pulses, 60ns, 13.2kV/cm, 10Hz) with Pr and YP in the medium, and the uptake of the dyes was monitored by time-lapse imaging for 3min. Even a single nsEP triggered a modest but detectable entry of both dyes, which increased linearly when more pulses were applied. The influx of Pr per pulse was constant and independent of the pulse number. The influx of YP per pulse was highest with 1- and 2-pulse exposures, decreasing to about twice the Pr level for trains from 5 to 100 pulses. The constant YP/Pr influx ratio for trains of 5 to 100 pulses suggests that increasing the number of pulses permeabilizes cells to a greater extent by increasing the pore number and not the pore diameter. PMID:25585279

  15. SART-Type Image Reconstruction from Overlapped Projections

    PubMed Central

    Yu, Hengyong; Ji, Changguo; Wang, Ge

    2011-01-01

    To maximize the time-integrated X-ray flux from multiple X-ray sources and shorten the data acquisition process, a promising way is to allow overlapped projections from multiple sources being simultaneously on without involving the source multiplexing technology. The most challenging task in this configuration is to perform image reconstruction effectively and efficiently from overlapped projections. Inspired by the single-source simultaneous algebraic reconstruction technique (SART), we hereby develop a multisource SART-type reconstruction algorithm regularized by a sparsity-oriented constraint in the soft-threshold filtering framework to reconstruct images from overlapped projections. Our numerical simulation results verify the correctness of the proposed algorithm and demonstrate the advantage of image reconstruction from overlapped projections. PMID:20871854

  16. A study of ablation, spatial, and temporal characteristics of laser-induced plasmas generated by multiple collinear pulses.

    PubMed

    Galbács, G; Jedlinszki, N; Herrera, K; Omenetto, N; Smith, B W; Winefordner, J D

    2010-02-01

    Multi-pulse laser-induced breakdown spectroscopy (LIBS) in the collinear pulse configuration with time-integrating detection was performed on metallic samples in ambient air in an effort to clarify the contributing processes responsible for the signal enhancement observed in comparison with single-pulse excitation. Complementary experiments were also carried out on another LIBS setup using detection by an imaging spectrograph with high time resolution. The effects of laser bursts consisting of up to seven ns-range pulses from Nd-doped solid-state lasers operating at their fundamental wavelength and separated by 8.5-50 micros time gaps was studied. The ablation and emission characteristics of the generated plasmas were investigated using light profilometry, microscopy, plasma imaging, emission distribution mapping, time-resolved line emission monitoring, and plasma temperature calculations. The experimental data suggest that the two contributing processes mainly responsible for the signal enhancement effect are the plume reheating caused by the sequential laser pulses and, more dominantly, the increased material ablation attributed to the lower breakdown threshold for the preheated (molten) sample surface and/or the reduced background gas pressure behind the shockwave of preceding pulses. PMID:20149277

  17. Superposed pulse amplitude modulation for visible light communication.

    PubMed

    Li, J F; Huang, Z T; Zhang, R Q; Zeng, F X; Jiang, M; Ji, Y F

    2013-12-16

    We propose and experimentally demonstrate a novel modulation scheme called superposed pulse amplitude modulation (SPAM) which is low-cost, insensitive to non-linearity of light emitting diode (LED). Multiple optical pulses transmit parallelly from different spatial position in the LED array and overlap linearly in free space to realize SPAM. With LED arrangement, the experimental results show that using the modulation we proposed the data rate of 120 Mbit/s with BER 1 × 10(-3) can be achieved with an optical blue filter and RC post-equalization. PMID:24514674

  18. High-resolution 1H NMR in solids with multiple-pulse sequences and magic-angle sample spinning at 270 MHz

    NASA Astrophysics Data System (ADS)

    Scheler, G.; Haubenreisser, U.; Rosenberger, H.

    A probe suitable for 270-MHz 1H NMR in solids is described, using the combination of the phase-error-compensated WAHUHA multiple-pulse cycle and magic-angle sample spinning (MAS). The experimental results obtained at this frequency are compared with measurements at 60 MHz. Because of the increase of frequency the spectral resolution is improved by a factor of about 5. For a variety of organic and inorganic substances the resolution varies from 0.3 ppm in polycrystalline adamantane to about 2 ppm, sufficient to resolve resonance signals of protons of different molecular groups, such as NH 3, NH 4, olefinic, aromatic, and aliphatic protons. Averaged chemical shifts of a series of selected hydrogen-bonded powder samples are discussed. The residual linewidths were found to be due predominantly to second-order residual dipolar broadening, the cross term between resonance offset and dipolar interaction, nonresolved chemical shifts, and interactions of protons with nuclei which have a strong quadrupolar moment. The resolution is expected to be increased by combining the high-field MAS experiments and more effective multiple-pulse sequences, e.g., the 24-pulse cycle developed recently by Burum and Rhim.

  19. Interference of Overlapping Insect Vibratory Communication Signals: An Eushistus heros Model

    PubMed Central

    Čokl, Andrej; Laumann, Raul Alberto; Žunič Kosi, Alenka; Blassioli-Moraes, Maria Carolina; Virant-Doberlet, Meta; Borges, Miguel

    2015-01-01

    Plants limit the range of insect substrate-borne vibratory communication by their architecture and mechanical properties that change transmitted signal time, amplitude and frequency characteristics. Stinkbugs gain higher signal-to-noise ratio and increase communication distance by emitting narrowband low frequency vibratory signals that are tuned with transmission properties of plants. The objective of the present study was to investigate hitherto overlooked consequences of duetting with mutually overlapped narrowband vibratory signals. The overlapped vibrations of the model stinkbug species Eushistus heros, produced naturally or induced artificially on different plants, have been analysed. They represent female and male strategies to preserve information within a complex masked signal. The brown stinkbugs E. heros communicate with species and gender specific vibratory signals that constitute characteristic duets in the calling, courtship and rivalry phases of mating behaviour. The calling female pulse overlaps the male vibratory response when the latency of the latter is shorter than the duration of the female triggering signal or when the male response does not inhibit the following female pulse. Overlapping of signals induces interference that changes their amplitude pattern to a sequence of regularly repeated pulses in which their duration and the difference between frequencies of overlapped vibrations are related inversely. Interference does not occur in overlapped narrow band female calling pulses and broadband male courtship pulse trains. In a duet with overlapped signals females and males change time parameters and increase the frequency difference between signals by changing the frequency level and frequency modulation pattern of their calls. PMID:26098637

  20. Interference of Overlapping Insect Vibratory Communication Signals: An Eushistus heros Model.

    PubMed

    Čokl, Andrej; Laumann, Raul Alberto; Žunič Kosi, Alenka; Blassioli-Moraes, Maria Carolina; Virant-Doberlet, Meta; Borges, Miguel

    2015-01-01

    Plants limit the range of insect substrate-borne vibratory communication by their architecture and mechanical properties that change transmitted signal time, amplitude and frequency characteristics. Stinkbugs gain higher signal-to-noise ratio and increase communication distance by emitting narrowband low frequency vibratory signals that are tuned with transmission properties of plants. The objective of the present study was to investigate hitherto overlooked consequences of duetting with mutually overlapped narrowband vibratory signals. The overlapped vibrations of the model stinkbug species Eushistus heros, produced naturally or induced artificially on different plants, have been analysed. They represent female and male strategies to preserve information within a complex masked signal. The brown stinkbugs E. heros communicate with species and gender specific vibratory signals that constitute characteristic duets in the calling, courtship and rivalry phases of mating behaviour. The calling female pulse overlaps the male vibratory response when the latency of the latter is shorter than the duration of the female triggering signal or when the male response does not inhibit the following female pulse. Overlapping of signals induces interference that changes their amplitude pattern to a sequence of regularly repeated pulses in which their duration and the difference between frequencies of overlapped vibrations are related inversely. Interference does not occur in overlapped narrow band female calling pulses and broadband male courtship pulse trains. In a duet with overlapped signals females and males change time parameters and increase the frequency difference between signals by changing the frequency level and frequency modulation pattern of their calls. PMID:26098637

  1. Competitive STDP Learning of Overlapping Spatial Patterns.

    PubMed

    Krunglevicius, Dalius

    2015-08-01

    Spike-timing-dependent plasticity (STDP) is a set of Hebbian learning rules firmly based on biological evidence. It has been demonstrated that one of the STDP learning rules is suited for learning spatiotemporal patterns. When multiple neurons are organized in a simple competitive spiking neural network, this network is capable of learning multiple distinct patterns. If patterns overlap significantly (i.e., patterns are mutually inclusive), however, competition would not preclude trained neuron's responding to a new pattern and adjusting synaptic weights accordingly. This letter presents a simple neural network that combines vertical inhibition and Euclidean distance-dependent synaptic strength factor. This approach helps to solve the problem of pattern size-dependent parameter optimality and significantly reduces the probability of a neuron's forgetting an already learned pattern. For demonstration purposes, the network was trained for the first ten letters of the Braille alphabet. PMID:26079753

  2. Compositional and Microstructural Evolution of Olivine Under Multiple-Cycle Pulsed Laser Irradiation as Revealed by FIB/Field-Emission TEM

    NASA Technical Reports Server (NTRS)

    Christoffersen, R.; Loeffler, M. J.; Dukes, C. A.; Keller, L. P.; Baragiola, R. A.

    2016-01-01

    The use of pulsed laser irradiation to simulate the short duration, high-energy conditions characteristic of micrometeorite impacts is now an established approach in experimental space weathering studies. The laser generates both melt and vapor deposits that contain nanophase metallic Fe (npFe(sup 0)) grains with size distributions and optical properties similar to those in natural impact-generated melt and vapor deposits. There remains uncertainty, however, about how well lasers simulate the mechanical work and internal (thermal) energy partitioning that occurs in actual impacts. We are currently engaged in making a direct comparison between the products of laser irradiation and experimental/natural hypervelocity impacts. An initial step reported here is to use analytical SEM and TEM is to attain a better understanding of how the microstructure and composition of laser deposits evolve over multiple cycles of pulsed laser irradiation.

  3. A label-free high throughput resistive-pulse sensor for simultaneous differentiation and measurement of multiple particle-laden analytes

    NASA Astrophysics Data System (ADS)

    Jagtiani, Ashish V.; Sawant, Rupesh; Zhe, Jiang

    2006-08-01

    We describe an all-electronic, label-free, resistive-pulse sensor that utilizes multiple microchannels for parallel detection, counting and differentiation of multiple biological particles simultaneously. Four particle solutions, including 20 µm and 40 µm polymethacrylate particles, Juniper Scopulorum (Rocky Mountain Juniper) pollen and Populus deltidoes (Eastern Cottonwood) pollen, were loaded to the four peripheral reservoirs, respectively, and were driven to the central reservoir through four microchannels, all operating simultaneously for particle detection and counting. Experiments demonstrated that this sensor was able to differentiate and count multiple particle solutions simultaneously through its four microchannels fabricated on polymer membranes. Thus the sensing throughput has been improved significantly in contrast to typical Coulter counters without sacrificing accuracy, sensitivity and reliability. Furthermore, the experimental results also proved the feasibility of differentiating various pollens from polymethacrylate microparticles with the multi-channel resistive-pulse sensor. The differentiation is based on difference in size and surface charge for the bioparticles, with no need for labeling of samples. Possible improvements and extensions to other biological particle detection are discussed.

  4. Steady slip pulses on faults with rate- and state-dependent friction and multiple thermal weakening mechanisms

    NASA Astrophysics Data System (ADS)

    Viesca, R. C.; Garagash, D.

    2012-12-01

    We present solutions for steadily propagating slip pulses whose underlying frictional evolution is dependent on both the rate of slip and the evolution of a state parameter (of a slip-law type), with strong velocity-dependent weakening of friction at high slip rates (via flash heating of asperity contacts). Additional weakening occurs by reduction of the effective normal stress by thermal pressurization of pore fluid within a shear zone of fixed nominal thickness. Such strong dynamic weakening mechanisms allow for rupture of faults under levels of a shear stress much lower than a nominal static strength. For decreasing levels of background shear stress, slip pulses become the favored mode as a critical point is reached where crack-like rupture modes may be inadmissible (Zheng and Rice, BSSA 1998). For even further decreases in shear stress, slip pulses may arrest shortly after nucleation, and our interest in characterizing steady pulse solutions lies partially in this precarious transition. The relative effect of the two thermal weakening mechanisms is determined by the relative size of the slip scales over which the flash heating and thermal pressurization evolve (Dc and Lachenbruch's δ c, respectively). Laboratory measurements of Dc and estimates for δ c indicate that Dc ≤ δ c: i.e., at the tip, weakening occurs as a cascade, which may be partially represented by tip solutions that neglect healing (Garagash and Viesca, AGU FM 2011). Considering the trailing edge, as state evolution of the slip-law type does not provide frictional restrengthening at zero slip velocity, the slip pulse heals asymptotically with distance behind the rupture tip in the absence of thermal pressurization. A robust, effective pulse length can be established in this case by setting a threshold value of the slip velocity. Allowing for TP provides a mechanism for stationary restrengthening and relocking of the fault at the trailing edge (Garagash, JGR 2012). We find relations between

  5. Clique graphs and overlapping communities

    NASA Astrophysics Data System (ADS)

    Evans, T. S.

    2010-12-01

    It is shown how to construct a clique graph in which properties of cliques of a fixed order in a given graph are represented by vertices in a weighted graph. Various definitions and motivations for these weights are given. The detection of communities or clusters is used to illustrate how a clique graph may be exploited. In particular a benchmark network is shown where clique graphs find the overlapping communities accurately while vertex partition methods fail.

  6. A suite of pulse sequences based on multiple sequential acquisitions at one and two radiofrequency channels for solid-state magic-angle spinning NMR studies of proteins.

    PubMed

    Sharma, Kshama; Madhu, Perunthiruthy K; Mote, Kaustubh R

    2016-08-01

    One of the fundamental challenges in the application of solid-state NMR is its limited sensitivity, yet a majority of experiments do not make efficient use of the limited polarization available. The loss in polarization in a single acquisition experiment is mandated by the need to select out a single coherence pathway. In contrast, sequential acquisition strategies can encode more than one pathway in the same experiment or recover unused polarization to supplement a standard experiment. In this article, we present pulse sequences that implement sequential acquisition strategies on one and two radiofrequency channels with a combination of proton and carbon detection to record multiple experiments under magic-angle spinning. We show that complementary 2D experiments such as [Formula: see text] and [Formula: see text] or DARR and [Formula: see text], and 3D experiments such as [Formula: see text] and [Formula: see text], or [Formula: see text] and [Formula: see text]  can be combined in a single experiment to ensure time savings of at least 40 %. These experiments can be done under fast or slow-moderate magic-angle spinning frequencies aided by windowed [Formula: see text] acquisition and homonulcear decoupling. The pulse sequence suite is further expanded by including pathways that allow the recovery of residual polarization, the so-called 'afterglow' pathways, to encode a number of pulse sequences to aid in assignments and chemical-shift mapping. PMID:27364976

  7. Precise and high-speed control of partial pressures of multiple gas species in plasma process chamber using pulse-controlled gas injection

    SciTech Connect

    Morishita, Sadaharu; Goto, Tetsuya; Nagase, Masaaki; Ohmi, Tadahiro

    2009-05-15

    Multiprocesses in a single plasma process chamber with high throughput require precise, sequential, high-speed alteration of partial pressures of multiple gas species. A conventional gas-distribution system cannot realize this because the system seriously overshoots gas pressure immediately following valve operation. Furthermore, chamber volume and conductance of gas piping between the system and chamber should both be considered because they delay the stabilizing time of gas pressure. Therefore, the authors proposed a new gas-distribution system without overshoot by controlling gas flow rate based on pressure measurement, as well as a method of pulse-controlled gas injection immediately following valve operation. Time variation of measured partial pressure agrees well with a calculation based on an equivalent-circuit model that represents the chamber and gas piping between the system and chamber. Using pulse-controlled gas injection, the stabilizing time can be reduced drastically to 0.6 s for HBr added to pure Ar plasma, and 0.7 s for O{sub 2} added to Ar/HBr plasma; without the pulse control, the stabilizing times are 3 and 7 s, respectively. In the O{sub 2} addition case, rapid stabilization can be achieved during the period of line/space pattern etching of poly-Si on a thin SiO{sub 2} film. This occurs without anomalous etching of the underlying SiO{sub 2} film or the Si substrate near the sidewall, thus obtaining a wide process margin with high throughput.

  8. Accurate estimation of airborne ultrasonic time-of-flight for overlapping echoes.

    PubMed

    Sarabia, Esther G; Llata, Jose R; Robla, Sandra; Torre-Ferrero, Carlos; Oria, Juan P

    2013-01-01

    In this work, an analysis of the transmission of ultrasonic signals generated by piezoelectric sensors for air applications is presented. Based on this analysis, an ultrasonic response model is obtained for its application to the recognition of objects and structured environments for navigation by autonomous mobile robots. This model enables the analysis of the ultrasonic response that is generated using a pair of sensors in transmitter-receiver configuration using the pulse-echo technique. This is very interesting for recognizing surfaces that simultaneously generate a multiple echo response. This model takes into account the effect of the radiation pattern, the resonant frequency of the sensor, the number of cycles of the excitation pulse, the dynamics of the sensor and the attenuation with distance in the medium. This model has been developed, programmed and verified through a battery of experimental tests. Using this model a new procedure for obtaining accurate time of flight is proposed. This new method is compared with traditional ones, such as threshold or correlation, to highlight its advantages and drawbacks. Finally the advantages of this method are demonstrated for calculating multiple times of flight when the echo is formed by several overlapping echoes. PMID:24284774

  9. Accurate Estimation of Airborne Ultrasonic Time-of-Flight for Overlapping Echoes

    PubMed Central

    Sarabia, Esther G.; Llata, Jose R.; Robla, Sandra; Torre-Ferrero, Carlos; Oria, Juan P.

    2013-01-01

    In this work, an analysis of the transmission of ultrasonic signals generated by piezoelectric sensors for air applications is presented. Based on this analysis, an ultrasonic response model is obtained for its application to the recognition of objects and structured environments for navigation by autonomous mobile robots. This model enables the analysis of the ultrasonic response that is generated using a pair of sensors in transmitter-receiver configuration using the pulse-echo technique. This is very interesting for recognizing surfaces that simultaneously generate a multiple echo response. This model takes into account the effect of the radiation pattern, the resonant frequency of the sensor, the number of cycles of the excitation pulse, the dynamics of the sensor and the attenuation with distance in the medium. This model has been developed, programmed and verified through a battery of experimental tests. Using this model a new procedure for obtaining accurate time of flight is proposed. This new method is compared with traditional ones, such as threshold or correlation, to highlight its advantages and drawbacks. Finally the advantages of this method are demonstrated for calculating multiple times of flight when the echo is formed by several overlapping echoes. PMID:24284774

  10. Structural and optical properties of ZnMgO thin films grown by pulsed laser deposition using ZnO-MgO multiple targets

    NASA Astrophysics Data System (ADS)

    Maemoto, Toshihiko; Ichiba, Nobuyasu; Ishii, Hiroaki; Sasa, Shigehiko; Inoue, Masataka

    2007-04-01

    We report on structural and optical properties for Zn1-xMgxO (ZMO) thin films produced by pulsed laser ablation. ZMO thin films were grown on a-plane Al2O3 substrates at 400°C. In order to efficiently incorporate Mg into ZnO thin films, we used multiple ZnO-MgO ablation targets. Pulses from a Nd:YAG laser (4th harmonic generation: 266 nm) were directed on the ZnO-MgO ablation targets, which consisted of MgO single crystals mounted on ZnO ceramic targets. The ZMO films were characterized by x-ray diffraction, optical transmittance and cathodeluminescence (CL) measurements. Highly c-axis oriented ZMO(0002) reflections corresponding to the wurtzite-phase were observed. The c-axis lattice constants of the films were determined from the ZnMgO(0002) peak. The c-axis length of the ZMO films decreased linearly with Mg content. From the optical transmittance spectra of ZMO films, we observed a blue shift in the absorption edge with increasing Mg content. Band gap energies of ZMO thin films were determined from the optical transmittance and CL spectra. We found that the band gap energy changed from 3.27 eV to 3.95 eV. The Mg content of ZMO films increased monotonically with the number of laser pulses which struck the MgO target. These results show that laser ablation using multiple targets of ZnO and MgO is effective for band engineering of ZMO.

  11. The Influence of Sex and Season on Conspecific Spatial Overlap in a Large, Actively-Foraging Colubrid Snake.

    PubMed

    Bauder, Javan M; Breininger, David R; Bolt, M Rebecca; Legare, Michael L; Jenkins, Christopher L; Rothermel, Betsie B; McGarigal, Kevin

    2016-01-01

    Understanding the factors influencing the degree of spatial overlap among conspecifics is important for understanding multiple ecological processes. Compared to terrestrial carnivores, relatively little is known about the factors influencing conspecific spatial overlap in snakes, although across snake taxa there appears to be substantial variation in conspecific spatial overlap. In this study, we described conspecific spatial overlap of eastern indigo snakes (Drymarchon couperi) in peninsular Florida and examined how conspecific spatial overlap varied by sex and season (breeding season vs. non-breeding season). We calculated multiple indices of spatial overlap using 6- and 3-month utilization distributions (UD) of dyads of simultaneously adjacent telemetered snakes. We also measured conspecific UD density values at each telemetry fix and modeled the distribution of those values as a function of overlap type, sex, and season using generalized Pareto distributions. Home range overlap between males and females was significantly greater than overlap between individuals of the same sex and male home ranges often completely contained female home ranges. Male home ranges overlapped little during both seasons, whereas females had higher levels of overlap during the non-breeding season. The spatial patterns observed in our study are consistent with those seen in many mammalian carnivores, in which low male-male overlap and high inter-sexual overlap provides males with greater access to females. We encourage additional research on the influence of prey availability on conspecific spatial overlap in snakes as well as the behavioral mechanisms responsible for maintaining the low levels of overlap we observed. PMID:27490346

  12. The Influence of Sex and Season on Conspecific Spatial Overlap in a Large, Actively-Foraging Colubrid Snake

    PubMed Central

    Bauder, Javan M.; Breininger, David R.; Bolt, M. Rebecca; Legare, Michael L.; Jenkins, Christopher L.; Rothermel, Betsie B.; McGarigal, Kevin

    2016-01-01

    Understanding the factors influencing the degree of spatial overlap among conspecifics is important for understanding multiple ecological processes. Compared to terrestrial carnivores, relatively little is known about the factors influencing conspecific spatial overlap in snakes, although across snake taxa there appears to be substantial variation in conspecific spatial overlap. In this study, we described conspecific spatial overlap of eastern indigo snakes (Drymarchon couperi) in peninsular Florida and examined how conspecific spatial overlap varied by sex and season (breeding season vs. non-breeding season). We calculated multiple indices of spatial overlap using 6- and 3-month utilization distributions (UD) of dyads of simultaneously adjacent telemetered snakes. We also measured conspecific UD density values at each telemetry fix and modeled the distribution of those values as a function of overlap type, sex, and season using generalized Pareto distributions. Home range overlap between males and females was significantly greater than overlap between individuals of the same sex and male home ranges often completely contained female home ranges. Male home ranges overlapped little during both seasons, whereas females had higher levels of overlap during the non-breeding season. The spatial patterns observed in our study are consistent with those seen in many mammalian carnivores, in which low male-male overlap and high inter-sexual overlap provides males with greater access to females. We encourage additional research on the influence of prey availability on conspecific spatial overlap in snakes as well as the behavioral mechanisms responsible for maintaining the low levels of overlap we observed. PMID:27490346

  13. Long Term Effects of Multiple DBD Pulses on Thin Liquid Layers Over Tissue: Reactive Fluences and Electric Fields

    NASA Astrophysics Data System (ADS)

    Tian, Wei; Kushner, Mark J.

    2014-10-01

    Atmospheric dielectric barrier discharges (DBDs) are used in treatment of tissue, often covered by thin liquid layers. The reactivity reaching the tissue depends on the plasma dose, composition and acidification of the liquid, and the cumulative delivery of electric fields through the liquid. In this paper, we report on a computational investigation of the interaction of DBDs with a thin liquid layer covering tissue over many minutes. We used nonPDPSIM, a 2-d model in which Poisson's equation, the electron temperature equation, transport equations for charged and neutral species and radiation transport are solved in both the gas and liquid. The liquid layer, 100's μm thick, is water with dissolved gases [O2aq (aq is aqueous), CO2aq], metal ions (Feaq2+ , Feaq3+) , and organics (RHaq) . Hundreds of pulses at 100 Hz are computed, followed by minutes of afterglow. In the liquid, transient radicals (OHaq, Haq) are produced during the discharge pulse and are consumed during the interpulse period. Terminal species (H2O2aq, O3aq) accumulate and diffuse to the tissue. Ions are dominated by NO3-aq, O2-aq and H3Oaq+.Production of HNO3aq and HOONOaq is assisted by O2aq for the first pulses and then O3aq. Accumulating nitric acid lowers the pH. RHaq consumes most reactive oxygen species in the early plasma treatment leaving Raq. With longer exposure, RHaq can be consumed, enabling more ROS to reach the tissue. The cumulative exposure of electric fields to the tissue depends on the increasing conductivity of the liquid. Work supported by DOE Office of Fusion Energy Science and NSF.

  14. Radial sets: interactive visual analysis of large overlapping sets.

    PubMed

    Alsallakh, Bilal; Aigner, Wolfgang; Miksch, Silvia; Hauser, Helwig

    2013-12-01

    In many applications, data tables contain multi-valued attributes that often store the memberships of the table entities to multiple sets such as which languages a person masters, which skills an applicant documents, or which features a product comes with. With a growing number of entities, the resulting element-set membership matrix becomes very rich of information about how these sets overlap. Many analysis tasks targeted at set-typed data are concerned with these overlaps as salient features of such data. This paper presents Radial Sets, a novel visual technique to analyze set memberships for a large number of elements. Our technique uses frequency-based representations to enable quickly finding and analyzing different kinds of overlaps between the sets, and relating these overlaps to other attributes of the table entities. Furthermore, it enables various interactions to select elements of interest, find out if they are over-represented in specific sets or overlaps, and if they exhibit a different distribution for a specific attribute compared to the rest of the elements. These interactions allow formulating highly-expressive visual queries on the elements in terms of their set memberships and attribute values. As we demonstrate via two usage scenarios, Radial Sets enable revealing and analyzing a multitude of overlapping patterns between large sets, beyond the limits of state-of-the-art techniques. PMID:24051816

  15. Grid adaptation using chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1994-01-01

    The objective of this paper is to perform grid adaptation using composite overlapping meshes in regions of large gradient to accurately capture the salient features during computation. The chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using trilinear interpolation. Application to the Euler equations for shock reflections and to shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well-resolved.

  16. Grid adaptation using Chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1993-01-01

    The objective of this paper is to perform grid adaptation using composite over-lapping meshes in regions of large gradient to capture the salient features accurately during computation. The Chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using tri-linear interpolation. Applications to the Euler equations for shock reflections and to a shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well resolved.

  17. Recombining overlapping BACs into single large BACs.

    PubMed

    Kotzamanis, George; Kotsinas, Athanassios

    2015-01-01

    BAC clones containing the entire genomic region of a gene including the long-range regulatory elements are very useful for gene functional analysis. However, large genes often span more than the insert of a BAC clone, and single BACs covering the entire region of interest are not available. Here, we describe a general system for linking two or more overlapping BACs into a single clone. Two rounds of homologous recombination are used. In the first, the BAC inserts are subcloned into the pBACLink vectors. In the second, the two BACs are combined together. Multiple BACs in a contig can be combined by alternating use of the pBACLInk vectors, resulting in several BAC clones containing as much of the genomic region of a gene as required. Such BACs can then be used in gene expression studies and/or gene therapy applications. PMID:25239744

  18. Overlapped Fourier coding for optical aberration removal

    PubMed Central

    Horstmeyer, Roarke; Ou, Xiaoze; Chung, Jaebum; Zheng, Guoan; Yang, Changhuei

    2014-01-01

    We present an imaging procedure that simultaneously optimizes a camera’s resolution and retrieves a sample’s phase over a sequence of snapshots. The technique, termed overlapped Fourier coding (OFC), first digitally pans a small aperture across a camera’s pupil plane with a spatial light modulator. At each aperture location, a unique image is acquired. The OFC algorithm then fuses these low-resolution images into a full-resolution estimate of the complex optical field incident upon the detector. Simultaneously, the algorithm utilizes redundancies within the acquired dataset to computationally estimate and remove unknown optical aberrations and system misalignments via simulated annealing. The result is an imaging system that can computationally overcome its optical imperfections to offer enhanced resolution, at the expense of taking multiple snapshots over time. PMID:25321982

  19. Grid adaption using Chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1993-01-01

    The objective of this paper is to perform grid adaptation using composite over-lapping meshes in regions of large gradient to capture the salient features accurately during computation. The Chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using tri-linear interpolation. Applications to the Euler equations for shock reflections and to a shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well resolved.

  20. Hospital mergers and market overlap.

    PubMed Central

    Brooks, G R; Jones, V G

    1997-01-01

    OBJECTIVE: To address two questions: What are the characteristics of hospitals that affect the likelihood of their being involved in a merger? What characteristics of particular pairs of hospitals affect the likelihood of the pair engaging in a merger? DATA SOURCES/STUDY SETTING: Hospitals in the 12 county region surrounding the San Francisco Bay during the period 1983 to 1992 were the focus of the study. Data were drawn from secondary sources, including the Lexis/Nexis database, the American Hospital Association, and the Office of Statewide Health Planning and Development of the State of California. STUDY DESIGN: Seventeen hospital mergers during the study period were identified. A random sample of pairs of hospitals that did not merge was drawn to establish a statistically efficient control set. Models constructed from hypotheses regarding hospital and market characteristics believed to be related to merger likelihood were tested using logistic regression analysis. DATA COLLECTION: See Data Sources/Study Setting. PRINCIPAL FINDINGS: The analysis shows that the likelihood of a merger between a particular pair of hospitals is positively related to the degree of market overlap that exists between them. Furthermore, market overlap and performance difference interact in their effect on merger likelihood. In an analysis of individual hospitals, conditions of rivalry, hospital market share, and hospital size were not found to influence the likelihood that a hospital will engage in a merger. CONCLUSIONS: Mergers between hospitals are not driven directly by considerations of market power or efficiency as much as by the existence of specific merger opportunities in the hospitals' local markets. Market overlap is a condition that enables a merger to occur, but other factors, such as the relative performance levels of the hospitals in question and their ownership and teaching status, also play a role in influencing the likelihood that a merger will in fact take place. PMID

  1. New geologic mapping combined with geochemical, paleomagnetic, and high-precision 40Ar/39Ar analyses reveal multiple overlapping calderas formed 16.4-15.7 Ma at High Rock caldera complex, northwestern Nevada

    NASA Astrophysics Data System (ADS)

    Coble, M. A.; Mahood, G. A.

    2012-12-01

    We present new evidence from 1:100,000- and 1:24,000-scale geologic mapping for the presence of at least four overlapping calderas, 24 to 40 km in diameter, that formed in an interval of only 0.7 m.y. during the mid-Miocene at High Rock caldera complex in northwest Nevada and southern Oregon. In total, an estimated minimum volume of ~725 km3 of rhyolitic magma erupted from the complex between 16.5 and 15.5 Ma, covering an area of ~9,000 km2. Rapid eruption of numerous units at volumetric rates as high as 3,000-4,000 km3/m.y., strong welding of lithic-poor ignimbrites, extensive vapor-phase alteration of lavas and ignimbrites alike, a limited range of phenocryst content and assemblage, silicification along faults, and a lack of well-exposed stratigraphic sections has hindered previous reconnaissance-scale mapping and identification of caldera centers. Calderas are located based on truncation of precaldera rhyolitic lavas by caldera topographic walls, by arcuate patterns of rhyolite lavas that erupted along buried caldera ring faults, and by the presence of pumiceous caldera lake sediments. We attribute formation of the Virgin Valley, Badger Mountain, Hanging Rock, and Cottonwood Creek Calderas to collapse on eruption, respectively, of the ca. 16.37 Ma Idaho Canyon Tuff, the 16.34 Ma Summit Lake Tuff, the 16.0 Ma Soldier Meadows Tuff, and the 15.7 Ma Tuff of Yellow Rock Canyon. Additional smaller-volume pyroclastic units erupted during emplacement of geochemically similar rhyolitic lavas. More than 60 new 40Ar/39Ar ages were obtained on ignimbrites, fall deposits, and rhyolitic, trachytic and basaltic lavas. Many of the eruptive units in the HRCC differ in age by less than 100 k.y., which, at ca. 16 Ma, requires precision at the 1-2‰ (2σ standard error) level to distinguish units using 40Ar/39Ar geochronology. The high-precision of the analyses of sanidine in the rhyolites, coupled with geochemical and paleomagnetic measurements, allowed us to correlate far

  2. A Case for More Multiple Scattering Lidar from Space: Analysis of Four LITE Pulses Returned from a Marine Stratocumulus Deck

    NASA Technical Reports Server (NTRS)

    Davis, Anthony B.; Winker, David M.

    2011-01-01

    Outline: (1) Signal Physics for Multiple-Scattering Cloud Lidar, (2) SNR Estimation (3) Cloud Property Retrievals (3a) several techniques (3b) application to Lidar-In-space Technology Experiment (LITE) data (3c) relation to O2 A-band

  3. [Asthma-COPD overlap syndrome].

    PubMed

    Odler, Balázs; Müller, Veronika

    2016-08-01

    Obstructive lung diseases represent a major health problem worldwide due to their high prevalence associated with elevated socioeconomic costs. Bronchial asthma and chronic obstructive pulmonary disease are chronic obstructive ventilatory disorders with airway inflammation, however they are separate nosological entities based on thedifferent development, diagnostic and therapeutic approaches, and prognostic features. However, these diseases may coexist and can be defined as the coexistence of increased variability of airflow in a patient with incompletely reversible airway obstruction. This phenotype is called asthma - chronic obstructive pulmonary disease overlap syndrome. The syndrome is a clinical and scientific challenge as the majority of these patients have been excluded from the clinical and pharmacological trials, thus well-defined clinical characteristics and therapeutic approaches are lacking. The aim of this review is to summarize the currently available literature focusing on pathophysiological and clinical features, and discuss possible therapeutic approaches of patients with asthma - chronic obstructive pulmonary disease overlap syndrome. Orv. Hetil., 2016, 157(33), 1304-1313. PMID:27523313

  4. Multiple-Pulse Sounds and Seals: Results of a Harbor Seal (Phoca vitulina) Telemetry Study During Wind Farm Construction.

    PubMed

    Hastie, Gordon D; Russell, Debbie J F; McConnell, Bernie; Thompson, Dave; Janik, Vincent M

    2016-01-01

    Offshore construction and survey techniques can produce pulsed sounds with a high sound pressure level. In coastal waters, the areas in which they are produced are often also used by seals, potentially resulting in auditory damage or behavioral avoidance. Here, we describe a study on harbor seals during a wind farm installation off southeast England. The study used GPS/global system for mobile communication tags on 23 harbor seals that provided distribution and activity data; the closest range of individual seals to piling varied from 6.65 to 46.1 km. Furthermore, the maximum predicted received levels (RLs) at individual seals varied between 146.9 and 169.4 dB re 1 μPa peak to peak. PMID:26610987

  5. Item Overlap Correlations: Definitions, Interpretations, and Implications.

    ERIC Educational Resources Information Center

    Hsu, Louis M.

    1994-01-01

    Item overlap coefficient (IOC) formulas are discussed, providing six warnings about their calculation and interpretation and some explanations of why item overlap influences the Minnesota Multiphasic Personality Inventory and the Millon Clinical Multiaxial Inventory factor structures. (SLD)

  6. Design and Evaluation of a Virtual Quadrant Receiver for 4-ary Pulse Position Modulation/Optical Code Division Multiple Access (4-ary PPM/O-CDMA)

    SciTech Connect

    Mendez, A J; Hernandez, V J; Gagliardi, R M; Bennett, C V

    2006-12-29

    M-ary pulse position modulation (M-ary PPM) is an alternative to on-off-keying (OOK) that transmits multiple bits as a single symbol occupying a frame of M slots. PPM does not require thresholding as in OOK signaling, instead performing a comparison test among all slots in a frame to make the slot decision. Combining PPM with optical code division multiple access (PPM/O-CDMA) adds the benefit of supporting multiple concurrent, asynchronous bursty PPM users. While the advantages of PPM/O-CDMA are well known, implementing a receiver that performs comparison test can be difficult. This paper describes the design of a novel array receiver for M-ary PPM/O-CDMA (M = 4) where the received signal is mapped onto an xy-plane whose quadrants define the PPM slot decision by means of an associated control law. The receiver does not require buffering or nonlinear operations. In this paper we describe a planar lightwave circuit (PLCs) implementation of the receiver. We give detailed numerical simulations that test the concept and investigate the effects of multi-access interference (MAI) and optical beat interference (OBI) on the slot decisions. These simulations provide guidelines for subsequent experimental measurements that will be described.

  7. 47 CFR 73.509 - Prohibited overlap.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... overlap does not already exists, if: (1) The total area of overlap with that station would not be... modified NCE-FM station other than a Class D (secondary) station will not be accepted if the proposed operation would involve overlap of signal strength contours with any other station licensed by...

  8. 47 CFR 73.509 - Prohibited overlap.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... overlap does not already exists, if: (1) The total area of overlap with that station would not be... modified NCE-FM station other than a Class D (secondary) station will not be accepted if the proposed operation would involve overlap of signal strength contours with any other station licensed by...

  9. 47 CFR 73.509 - Prohibited overlap.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... overlap does not already exists, if: (1) The total area of overlap with that station would not be... modified NCE-FM station other than a Class D (secondary) station will not be accepted if the proposed operation would involve overlap of signal strength contours with any other station licensed by...

  10. 47 CFR 73.509 - Prohibited overlap.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... overlap does not already exists, if: (1) The total area of overlap with that station would not be... modified NCE-FM station other than a Class D (secondary) station will not be accepted if the proposed operation would involve overlap of signal strength contours with any other station licensed by...

  11. Evaluating the Role of Corticosteroid Pulse Therapy in Patients With Secondary Progressive Multiple Sclerosis Receiving Mitoxantrone: A Double Blind Randomized Controlled Clinical Trial

    PubMed Central

    Rahimdel, Abolghasem; Zeinali, Ahmad; Mellat, Ali

    2015-01-01

    Background: Multiple sclerosis (MS) is a central nervous system disorder with periods of recurrence and recovery. Mitoxantrone has been approved for secondary progressive MS (SPMS) treatment but data lacks the role of corticosteroid pulse therapy in SPMS. Objectives: To evaluate the role of corticosteroid pulse therapy in patients with SPMS receiving mitoxantrone. Patients and Methods: A double blind randomized controlled clinical trial was performed on 71 patients with SPMS referred to Shahid Sadoughi Hospital (Yazd, Iran) for receiving mitoxantrone in two groups. The first group (35 patients) received 20 mg mitoxantrone plus 500 mg methylprednisolone monthly for six months. The second group (36 patients) received the same dosage of mitoxantrone plus 100 CC of 5% dextrose water monthly for six months. Expanded disability status scale (EDSS), MRI plaques in both groups before and after the treatment completion and six months after the end of trial were compared together. Results: 28 men and 43 women enrolled in the study. MRI plaques number reduced in groups significantly (2.29 vs. 2.17) without significant difference between the groups (P = 0.782). Six months after trial completion, plaques number increased in groups without significantly difference (0.72 vs. 0.77, P = 0.611). The mean value of EDSS showed significant reduction at the end of treatment in groups (0.79 and 0.53) without significant difference between the groups (P = 0.953). Six months after trial completion, EDSS increased in groups without significant difference (0.35 vs. 0.43, P = 0.624). Conclusions: Corticosteroid pulse therapy in SPMS was effective in inflammatory process, but could not postpone or decline the neurodegenerative process and besides the imposing side effects could not result in significant improvement in EDSS and MRI plaques number in long term. PMID:26566454

  12. Long wavelength superluminal pulse propagation in a defect slab doped with GaAs/AlGaAs multiple quantum well nanostructure

    NASA Astrophysics Data System (ADS)

    Panahi, M.; Solookinejad, G.; Sangachin, E. Ahmadi; Asadpour, S. H.

    2015-12-01

    In this paper, long wavelength superluminal and subluminal properties of pulse propagation in a defect slab medium doped with four-level GaAs/AlGaAs multiple quantum wells (MQWs) with 15 periods of 17.5 nm GaAs wells and 15 nm Al0.3Ga0.7As barriers is theoretically discussed. It is shown that exciton spin relaxation (ESR) between excitonic states in MQWs can be used for controlling the superluminal and subluminal light transmissions and reflections at different wavelengths. We also show that reflection and transmission coefficients depend on the thickness of the slab for the resonance and nonresonance conditions. Moreover, we found that the ESR for nonresonance condition lead to superluminal light transmission and subluminal light reflection.

  13. Selection of high-definition 2D virtual profiles with multiple RF pulse excitations along interleaved echo-planar k-space trajectories.

    PubMed

    Panych, L P; Oshio, K

    1999-02-01

    A method for spatially selective excitation of 2D RF profiles is reported. The method makes use of multiple shots to traverse interleaved echo-planar trajectories in 2D k space during each RF pulse excitation. Results from each of the interleaved excitations are summed, with the net effect being the excitation of a virtual profile. The method allows for the excitation of high-definition 2D profiles with standard gradient hardware. Signal to noise is enhanced by a factor equal to the square root of the number of interleaved excitations, compared with a single-shot excitation. Potential applications for volume-localized spectroscopy, functional MRI, and high-resolution reduced-field-of-view imaging are discussed. PMID:10080266

  14. Multiple exciton generation induced enhancement of the photoresponse of pulsed-laser-ablation synthesized single-wall-carbon-nanotube/PbS-quantum-dots nanohybrids.

    PubMed

    Ka, Ibrahima; Le Borgne, Vincent; Fujisawa, Kazunori; Hayashi, Takuya; Kim, Yoong Ahm; Endo, Morinobu; Ma, Dongling; El Khakani, My Ali

    2016-01-01

    The pulsed laser deposition method was used to decorate appropriately single wall carbon nanotubes (SWCNTs) with PbS quantum dots (QDs), leading to the formation of a novel class of SWCNTs/PbS-QDs nanohybrids (NHs), without resorting to any ligand engineering and/or surface functionalization. The number of laser ablation pulses (NLp) was used to control the average size of the PbS-QDs and their coverage on the SWCNTs' surface. Photoconductive (PC) devices fabricated from these SWCNTs/PbS-QDs NHs have shown a significantly enhanced photoresponse, which is found to be PbS-QD size dependent. Wavelength-resolved photocurrent measurements revealed a strong photoconductivity of the NHs in the UV-visible region, which is shown to be due to multiple exciton generation (MEG) in the PbS-QDs. For the 6.5 nm-diameter PbS-QDs (with a bandgap (Eg) = 0.86 eV), the MEG contribution of the NHs based PC devices was shown to lead to a normalized internal quantum efficiency in excess of 300% for photon energies ≥4.5Eg. While the lowest MEG threshold in our NHs based PC devices is found to be of ~2.5Eg, the MEG efficiency reaches values as high as 0.9 ± 0.1. PMID:26830452

  15. Effect of multiple short highly energetic X-ray pulses on the synthesis of endoglucanase by a mutant strain of Trichoderma reesei-M7

    PubMed Central

    Gemishev, Orlin; Zapryanov, Stanislav; Blagoev, Alexander; Markova, Maya; Savov, Valentin

    2014-01-01

    Bioconversion of cellulose-containing substrate to glucose represents an important area of modern biotechnology. Enzymes for the degradation of the polysaccharide part of biomass have been produced, mostly by fungi belonging to genus Trichoderma. Studies were carried out with the mutant strain Trichoderma reesei-M7, a cellulase producer. Spores of the enzyme producer were irradiated with different doses of characteristic X-ray radiation from metallic tungsten (mainly the W Kα1 and Kα2 lines) with a high dose rate. The latter is a specific property of the dense plasma focus (DPF) device, which has pulsed operation and thus gives short and highly energetic pulses of multiple types of rays and particles. In this case, we focused our study on the influence of hard X-rays. The doses of X-rays absorbed by the spores varied in the range of approximately 5–11,000 mSv measured with thermoluminescent dosimeters (TLD). The influence of the applied doses in combination with exceptionally high dose rates (in the order of tens of millisieverts per microsecond) on the activity of the produced endoglucanase, amount of biomass and extra-cellular protein, was studied in batch cultivation conditions. In the dose range of 200–1200 mSv, some enhancement of endoglucanase activity was obtained: around 18%–32%, despite the drop of the biomass amount, compared with the untreated material. PMID:26019569

  16. Multiple exciton generation induced enhancement of the photoresponse of pulsed-laser-ablation synthesized single-wall-carbon-nanotube/PbS-quantum-dots nanohybrids

    NASA Astrophysics Data System (ADS)

    Ka, Ibrahima; Le Borgne, Vincent; Fujisawa, Kazunori; Hayashi, Takuya; Kim, Yoong Ahm; Endo, Morinobu; Ma, Dongling; El Khakani, My Ali

    2016-02-01

    The pulsed laser deposition method was used to decorate appropriately single wall carbon nanotubes (SWCNTs) with PbS quantum dots (QDs), leading to the formation of a novel class of SWCNTs/PbS-QDs nanohybrids (NHs), without resorting to any ligand engineering and/or surface functionalization. The number of laser ablation pulses (NLp) was used to control the average size of the PbS-QDs and their coverage on the SWCNTs’ surface. Photoconductive (PC) devices fabricated from these SWCNTs/PbS-QDs NHs have shown a significantly enhanced photoresponse, which is found to be PbS-QD size dependent. Wavelength-resolved photocurrent measurements revealed a strong photoconductivity of the NHs in the UV-visible region, which is shown to be due to multiple exciton generation (MEG) in the PbS-QDs. For the 6.5 nm-diameter PbS-QDs (with a bandgap (Eg) = 0.86 eV), the MEG contribution of the NHs based PC devices was shown to lead to a normalized internal quantum efficiency in excess of 300% for photon energies ≥4.5Eg. While the lowest MEG threshold in our NHs based PC devices is found to be of ~2.5Eg, the MEG efficiency reaches values as high as 0.9 ± 0.1.

  17. Multiple exciton generation induced enhancement of the photoresponse of pulsed-laser-ablation synthesized single-wall-carbon-nanotube/PbS-quantum-dots nanohybrids

    PubMed Central

    Ka, Ibrahima; Le Borgne, Vincent; Fujisawa, Kazunori; Hayashi, Takuya; Kim, Yoong Ahm; Endo, Morinobu; Ma, Dongling; El Khakani, My Ali

    2016-01-01

    The pulsed laser deposition method was used to decorate appropriately single wall carbon nanotubes (SWCNTs) with PbS quantum dots (QDs), leading to the formation of a novel class of SWCNTs/PbS-QDs nanohybrids (NHs), without resorting to any ligand engineering and/or surface functionalization. The number of laser ablation pulses (NLp) was used to control the average size of the PbS-QDs and their coverage on the SWCNTs’ surface. Photoconductive (PC) devices fabricated from these SWCNTs/PbS-QDs NHs have shown a significantly enhanced photoresponse, which is found to be PbS-QD size dependent. Wavelength-resolved photocurrent measurements revealed a strong photoconductivity of the NHs in the UV-visible region, which is shown to be due to multiple exciton generation (MEG) in the PbS-QDs. For the 6.5 nm-diameter PbS-QDs (with a bandgap (Eg) = 0.86 eV), the MEG contribution of the NHs based PC devices was shown to lead to a normalized internal quantum efficiency in excess of 300% for photon energies ≥4.5Eg. While the lowest MEG threshold in our NHs based PC devices is found to be of ~2.5Eg, the MEG efficiency reaches values as high as 0.9 ± 0.1. PMID:26830452

  18. Recognition of highly overlapping ellipse-like bubble images

    NASA Astrophysics Data System (ADS)

    Honkanen, Markus; Saarenrinne, Pentti; Stoor, Tuomas; Niinimäki, Jouko

    2005-09-01

    This study describes a robust bubble image recognition algorithm that detects the in-focus, ellipse-like bubble images from experimental images with heavily overlapping bubbles. The principle of the overlapping object recognition (OOR) algorithm is that it calculates the overall perimeter of a segment, finds the points at the perimeter that represent the connecting points of overlapping objects, clusters the perimeter arcs that belong to the same object and fits ellipses on the clustered arcs of the perimeter. The accuracy of the algorithm is studied with simulated images of overlapping ellipses, providing an RMS error of 0.9 pixels in size measurement. The algorithm is utilized in measurements of bubble size distributions with a direct imaging (DI) technique in which a digital camera and a pulsed back light are used to detect bubble outlines. The measurement system is calibrated with stagnant bubbles in a gel in order to define the bubble size dependent effective thickness of the measurement volume and the grey scale gradient threshold as a focus criterion. The described concept with a novel bubble recognition algorithm enables DI measurements in denser bubbly flows with increased reliability and accuracy of the measurement results. The measurement technique is applied to the study of the turbulent bubbly flow in a papermaking machine, in the outlet pipe of a centrifugal pump.

  19. Near perfect mode overlap between independently seeded, gain-switched lasers

    NASA Astrophysics Data System (ADS)

    Comandar, L. C.; Lucamarini, M.; Fröhlich, B.; Dynes, J. F.; Yuan, Z. L.; Shields, A. J.

    2016-08-01

    We drastically improve the mode overlap between independently seeded, gain-switched laser diodes operating at gigahertz repetition rates by implementing a pulsed light seeding technique. Injecting pulsed light reduces the emission time jitter and enables frequency chirp synchronization while maintaining random optical phases of the emitted laser pulses. We measure interference of these pulsed sources both in the macroscopic regime, where we demonstrate near perfect mode overlap, and in the single photon regime, where we achieve a Hong-Ou-Mandel dip visibility of 0.499+/-0.004, thus saturating the theoretical limit of 0.5. The measurement results are reproduced by Monte-Carlo simulations with no free parameters. Our light source is an ideal solution for generation of high rate, indistinguishable coherent pulses for quantum information applications.

  20. Overlapping Structures in Sensory-Motor Mappings

    PubMed Central

    Earland, Kevin; Lee, Mark; Shaw, Patricia; Law, James

    2014-01-01

    This paper examines a biologically-inspired representation technique designed for the support of sensory-motor learning in developmental robotics. An interesting feature of the many topographic neural sheets in the brain is that closely packed receptive fields must overlap in order to fully cover a spatial region. This raises interesting scientific questions with engineering implications: e.g. is overlap detrimental? does it have any benefits? This paper examines the effects and properties of overlap between elements arranged in arrays or maps. In particular we investigate how overlap affects the representation and transmission of spatial location information on and between topographic maps. Through a series of experiments we determine the conditions under which overlap offers advantages and identify useful ranges of overlap for building mappings in cognitive robotic systems. Our motivation is to understand the phenomena of overlap in order to provide guidance for application in sensory-motor learning robots. PMID:24392118

  1. Identifying Overlapping Language Communities: The Case of Chiriquí and Panamanian Signed Languages

    ERIC Educational Resources Information Center

    Parks, Elizabeth S.

    2016-01-01

    In this paper, I use a holographic metaphor to explain the identification of overlapping sign language communities in Panama. By visualizing Panama's complex signing communities as emitting community "hotspots" through social drama on multiple stages, I employ ethnographic methods to explore overlapping contours of Panama's sign language…

  2. Diagnostics of atmospheric-pressure pulsed-dc discharge with metal and liquid anodes by multiple laser-aided methods

    NASA Astrophysics Data System (ADS)

    Urabe, Keiichiro; Shirai, Naoki; Tomita, Kentaro; Akiyama, Tsuyoshi; Murakami, Tomoyuki

    2016-08-01

    The density and temperature of electrons and key heavy particles were measured in an atmospheric-pressure pulsed-dc helium discharge plasma with a nitrogen molecular impurity generated using system with a liquid or metal anode and a metal cathode. To obtain these parameters, we conducted experiments using several laser-aided methods: Thomson scattering spectroscopy to obtain the spatial profiles of electron density and temperature, Raman scattering spectroscopy to obtain the neutral molecular nitrogen rotational temperature, phase-modulated dispersion interferometry to determine the temporal variation of the electron density, and time-resolved laser absorption spectroscopy to analyze the temporal variation of the helium metastable atom density. The electron density and temperature measured by Thomson scattering varied from 2.4  ×  1014 cm‑3 and 1.8 eV at the center of the discharge to 0.8  ×  1014 cm‑3 and 1.5 eV near the outer edge of the plasma in the case of the metal anode, respectively. The electron density obtained with the liquid anode was approximately 20% smaller than that obtained with the metal anode, while the electron temperature was not significantly affected by the anode material. The molecular nitrogen rotational temperatures were 1200 K with the metal anode and 1650 K with the liquid anode at the outer edge of the plasma column. The density of helium metastable atoms decreased by a factor of two when using the liquid anode.

  3. Evidence for multiple pulses of crystal-bearing magma during emplacement of the Doros layered intrusion, Namibia

    NASA Astrophysics Data System (ADS)

    Owen-Smith, T. M.; Ashwal, L. D.

    2015-12-01

    The Doros Complex is a relatively small (maximum 3.5 km × 7.5 km) shallow-level, lopolithic, layered mafic intrusion in the early Cretaceous Paraná-Etendeka Large Igneous Province. The stratigraphy broadly comprises a minor, fine-grained gabbroic sill and a sequence of primitive olivine-cumulate melagabbros, with a basal chilled margin, an intermediate plagioclase-cumulate olivine gabbro, and a sequence of mineralogically and texturally variable, intermediate, strongly foliated, plagioclase-, olivine- or magnetite-cumulate gabbros. An evolved syenitic (bostonite) phase occurs as cross-cutting dykes or as enclaves within the foliated gabbros. Major element modelling of the liquid line of descent shows that the spectrum of rock types, including the bostonite, is consistent with the fractionation of a basaltic parental magma that crystallised olivine, clinopyroxene, plagioclase, magnetite, K-feldspar and apatite. However, the stratigraphic succession does not correspond to a simple progressive differentiation trend but instead shows a series of punctuated trends, each defined by a compositional reversal or hiatus. Incompatible trace element concentrations do not increase upwards though the body of the intrusion. The major units show similar, mildly enriched rare earth element patterns, with minimal Eu anomalies. Back-calculation of the rare earth element concentrations of these cumulate rocks produces relatively evolved original liquid compositions, indicating fractionation of this liquid from a more primitive precursor. Based on combined field, petrographic, geochemical and geophysical evidence, we propose an origin for the Doros Complex by a minimum of seven closely spaced influxes of crystal-bearing magmas, each with phenocryst contents between 5% and 55%. These findings represent a departure from the traditional single-pulse liquid model for the formation of layered mafic intrusions and suggest the presence of an underlying magmatic mush column, i.e., a large

  4. Hydrodynamics of pulsed jetting in juvenile and adult brief squid Lolliguncula brevis: evidence of multiple jet 'modes' and their implications for propulsive efficiency.

    PubMed

    Bartol, Ian K; Krueger, Paul S; Stewart, William J; Thompson, Joseph T

    2009-06-01

    was detected and there was no apparent speed preference for the jet modes within the speed range considered in this study; however, propulsive efficiency did increase with speed partly because of a reduction in slip and jet angle with speed. Trends in higher slip, lower propulsive efficiency and higher relative lift production were observed for squid <5.0 cm DML compared with squid >/=5.0 cm DML. While these trends were observed when jet mode I and II were equally represented among the size classes, there was also greater relative dependence on jet mode I than jet mode II for squid <5.0 cm DML when all of the available jet sequences were examined. Collectively, these results indicate that approximately 5.0 cm DML is an important ontogenetic transition for the hydrodynamics of pulsed jetting in squids. The significance of our findings is that from early juvenile through to adult life stages, L. brevis is capable of producing a diversity of vortex ring-based jet structures, ranging from efficient short pulses to high-force longer duration pulses. Given that some of these structures had L(omega)/D(omega)s near F, and F represented the delineation between the two primary jet modes observed, fluid dynamics probably played an integral role in the evolution of squid locomotive systems. When this flexibility in jet dynamics is coupled with the highly versatile fins, which are capable of producing multiple hydrodynamic modes as well, it is clear that squid have a locomotive repertoire far more complex than originally thought. PMID:19483007

  5. Magnetic resonance imaging of myelin using ultrashort Echo time (UTE) pulse sequences: Phantom, specimen, volunteer and multiple sclerosis patient studies.

    PubMed

    Sheth, Vipul; Shao, Hongda; Chen, Jun; Vandenberg, Scott; Corey-Bloom, Jody; Bydder, Graeme M; Du, Jiang

    2016-08-01

    Clinical magnetic resonance imaging of multiple sclerosis (MS) has focused on indirect imaging of myelin in white matter by detecting signal from protons in the water associated with myelin. Here we show that protons in myelin can be directly imaged using ultrashort echo time (UTE) free induction decay (FID) and imaging sequences on a clinical 3T MR scanner. An adiabatic inversion recovery UTE (IR-UTE) sequence was used to detect signal from myelin and simultaneously suppress signal from water protons. Validation studies were performed on myelin lipid and myelin basic protein (MBP) phantoms in the forms of lyophilized powders as well as suspensions in D2O and H2O. IR-UTE sequences were then used to image MS brain specimens, healthy volunteers, and patients. The T2* of myelin was measured using a UTE FID sequence, as well as UTE and IR-UTE sequences at different TEs. T2* values of ~110-330μs were measured with UTE FID, as well as with UTE and IR-UTE sequences for myelin powders, myelin-D2O and myelin-H2O phantoms, consistent with selective imaging of myelin protons with IR-UTE sequences. Our studies showed myelin selective imaging of white matter in the brains in vitro and in vivo. Complete or partial signal loss was observed in specimens in areas of the brain with histopathologic evidence of myelin loss, and in the brain of patients with MS. PMID:27155128

  6. Solving Partial Differential Equations on Overlapping Grids

    SciTech Connect

    Henshaw, W D

    2008-09-22

    We discuss the solution of partial differential equations (PDEs) on overlapping grids. This is a powerful technique for efficiently solving problems in complex, possibly moving, geometry. An overlapping grid consists of a set of structured grids that overlap and cover the computational domain. By allowing the grids to overlap, grids for complex geometries can be more easily constructed. The overlapping grid approach can also be used to remove coordinate singularities by, for example, covering a sphere with two or more patches. We describe the application of the overlapping grid approach to a variety of different problems. These include the solution of incompressible fluid flows with moving and deforming geometry, the solution of high-speed compressible reactive flow with rigid bodies using adaptive mesh refinement (AMR), and the solution of the time-domain Maxwell's equations of electromagnetism.

  7. Photoimaging of the multiple filamentation of femtosecond laser pulses in poly(methyl methacrylate) doped with 2,2-difluoro-4-(9-anthracyl)-6-methyl-1,3,2-dioxaborine

    SciTech Connect

    Kulchin, Yu N; Vitrik, O B; Chekhlenok, A A; Zhizhchenko, A Yu; Proschenko, D Yu; Mirochnik, A G; Lyu Guohui

    2013-12-31

    We have studied the filamentation of femtosecond laser pulses (λ = 800 nm, ∼42 fs pulse duration) in poly(methyl methacrylate) doped with 2,2-difluoro-4-(9-anthracyl)-6-methyl-1,3,2- dioxaborine and the associated photomodification of the material. The results demonstrate that multiple filamentation occurs at pulse energies above 5 μJ. At a pulse energy of 1.5 mJ, it is accompanied by supercontinuum generation. The average filament length in PMMA is 9 mm and the filament diameter is ∼10 μm. An incident power density of ∼10{sup 12} W cm{sup -2} ensures inscription of the filament pattern owing to two-photon photochemical processes. Preliminary exposure to continuous light at λ = 400 nm enables an ordered filament pattern to be written. (interaction of laser radiation with matter)

  8. Prevalence and molecular characterization of Escherichia coli O157:H7 by multiple locus variable number tandem repeat analysis and pulsed field gel electrophoresis in three sheep farming operations in California.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A yearlong study was conducted to determine the fecal prevalence of Escherichia coli O157:H7 in three sheep ranches. Strain diversity and persistence was compared using multiple locus variable number tandem repeat analysis and pulsed field gel electrophoresis. Ranch C, a feedlot, consisted of young ...

  9. Overlap in Facebook Profiles Reflects Relationship Closeness.

    PubMed

    Castañeda, Araceli M; Wendel, Markie L; Crockett, Erin E

    2015-01-01

    We assessed the association between self-reported Inclusion of Other in the Self (IOS) and Facebook overlap. Ninety-two participants completed online measures of IOS and investment model constructs. Researchers then recorded Facebook data from participants' profile pages. Results from multilevel models revealed that IOS predicted Facebook overlap. Furthermore, Facebook overlap was associated with commitment and investment in ways comparable to self-reported IOS. These findings suggest that overlap in Facebook profiles can be used to measure relationship closeness. PMID:25635533

  10. Enzymatic assembly of overlapping DNA fragments.

    PubMed

    Gibson, Daniel G

    2011-01-01

    Three methods for assembling multiple, overlapping DNA molecules are described. Each method shares the same basic approach: (i) an exonuclease removes nucleotides from the ends of double-stranded (ds) DNA molecules, exposing complementary single-stranded (ss) DNA overhangs that are specifically annealed; (ii) the ssDNA gaps of the joined molecules are filled in by DNA polymerase, and the nicks are covalently sealed by DNA ligase. The first method employs the 3'-exonuclease activity of T4 DNA polymerase (T4 pol), Taq DNA polymerase (Taq pol), and Taq DNA ligase (Taq lig) in a two-step thermocycled reaction. The second method uses 3'-exonuclease III (ExoIII), antibody-bound Taq pol, and Taq lig in a one-step thermocycled reaction. The third method employs 5'-T5 exonuclease, Phusion® DNA polymerase, and Taq lig in a one-step isothermal reaction and can be used to assemble both ssDNA and dsDNA. These assembly methods can be used to seamlessly construct synthetic and natural genes, genetic pathways, and entire genomes and could be very useful for molecular engineering tools. PMID:21601685

  11. Simultaneous analysis of multiple enzymes increases accuracy of pulsed-field gel electrophoresis in assigning genetic relationships among homogeneous Salmonella strains.

    PubMed

    Zheng, Jie; Keys, Christine E; Zhao, Shaohua; Ahmed, Rafiq; Meng, Jianghong; Brown, Eric W

    2011-01-01

    Due to a highly homogeneous genetic composition, the subtyping of Salmonella enterica serovar Enteritidis strains to an epidemiologically relevant level remains intangible for pulsed-field gel electrophoresis (PFGE). We reported previously on a highly discriminatory PFGE-based subtyping scheme for S. enterica serovar Enteritidis that relies on a single combined cluster analysis of multiple restriction enzymes. However, the ability of a subtyping method to correctly infer genetic relatedness among outbreak strains is also essential for effective molecular epidemiological traceback. In this study, genetic and phylogenetic analyses were performed to assess whether concatenated enzyme methods can cluster closely related salmonellae into epidemiologically relevant hierarchies. PFGE profiles were generated by use of six restriction enzymes (XbaI, BlnI, SpeI, SfiI, PacI, and NotI) for 74 strains each of S. enterica serovar Enteritidis and S. enterica serovar Typhimurium. Correlation analysis of Dice similarity coefficients for all pairwise strain comparisons underscored the importance of combining multiple enzymes for the accurate assignment of genetic relatedness among Salmonella strains. The mean correlation increased from 81% and 41% for single-enzyme PFGE up to 99% and 96% for five-enzyme combined PFGE for S. enterica serovar Enteritidis and S. enterica serovar Typhimurium strains, respectively. Data regressions approached 100% correlation among Dice similarities for S. enterica serovar Enteritidis and S. enterica serovar Typhimurium strains when a minimum of six enzymes were concatenated. Phylogenetic congruence measures singled out XbaI, BlnI, SfiI, and PacI as most concordant for S. enterica serovar Enteritidis, while XbaI, BlnI, and SpeI were most concordant among S. enterica serovar Typhimurium strains. Together, these data indicate that PFGE coupled with sufficient enzyme numbers and combinations is capable of discerning accurate genetic relationships among

  12. Consistency of evoked responses to dual-stimulator, single-pulse transcranial magnetic stimulation in the lower limb of people with multiple sclerosis.

    PubMed

    Meaney, A; Collett, J; Dawes, H; Howells, K; Izadi, H

    2015-09-01

    The purpose of this study was to explore the within session and test-retest consistency of motor evoked potentials (MEP) elicited by transcranial magnetic stimulation (TMS) from the resting tibialis anterior (TA) muscle of 10 patients (two men, eight women) with clinically definite multiple sclerosis (MS). Dual stimulators were configured to produce a single pulse (DS/SP) through a hand-held coil. MEP were recorded in five blocks of five trials with a repeat test occurring 7-14 days later. Analysis of a trial sequence revealed the area of the first MEP trial of each block to be significantly different to subsequent trials (trials 2-5; p<0.05). We therefore discarded T1 from further analysis. Thereafter, repeated measures of analysis of variance of MEP characteristics and blocks of MEP (average of four trials) revealed no significant differences (p>0.05). The results of the repeat session revealed no significant differences in motor thresholds, MEP latency, MEP amplitude or MEP area between sessions (p>0.05). Test-retest intra-class coefficients of correlation and their 95% confidence intervals indicated high reliability (>0.80). Our results show that consistent, repeatable TMS measures can be obtained from the resting TA of MS patients using the DS/SP method. PMID:26154149

  13. 47 CFR 73.509 - Prohibited overlap.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 4 2014-10-01 2014-10-01 false Prohibited overlap. 73.509 Section 73.509 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES Noncommercial Educational FM Broadcast Stations § 73.509 Prohibited overlap. (a) An application for a new or modified NCE-FM station...

  14. Neural overlap in processing music and speech

    PubMed Central

    Peretz, Isabelle; Vuvan, Dominique; Lagrois, Marie-Élaine; Armony, Jorge L.

    2015-01-01

    Neural overlap in processing music and speech, as measured by the co-activation of brain regions in neuroimaging studies, may suggest that parts of the neural circuitries established for language may have been recycled during evolution for musicality, or vice versa that musicality served as a springboard for language emergence. Such a perspective has important implications for several topics of general interest besides evolutionary origins. For instance, neural overlap is an important premise for the possibility of music training to influence language acquisition and literacy. However, neural overlap in processing music and speech does not entail sharing neural circuitries. Neural separability between music and speech may occur in overlapping brain regions. In this paper, we review the evidence and outline the issues faced in interpreting such neural data, and argue that converging evidence from several methodologies is needed before neural overlap is taken as evidence of sharing. PMID:25646513

  15. Neural overlap in processing music and speech.

    PubMed

    Peretz, Isabelle; Vuvan, Dominique; Lagrois, Marie-Élaine; Armony, Jorge L

    2015-03-19

    Neural overlap in processing music and speech, as measured by the co-activation of brain regions in neuroimaging studies, may suggest that parts of the neural circuitries established for language may have been recycled during evolution for musicality, or vice versa that musicality served as a springboard for language emergence. Such a perspective has important implications for several topics of general interest besides evolutionary origins. For instance, neural overlap is an important premise for the possibility of music training to influence language acquisition and literacy. However, neural overlap in processing music and speech does not entail sharing neural circuitries. Neural separability between music and speech may occur in overlapping brain regions. In this paper, we review the evidence and outline the issues faced in interpreting such neural data, and argue that converging evidence from several methodologies is needed before neural overlap is taken as evidence of sharing. PMID:25646513

  16. Cluster-enhanced sparse approximation of overlapping ultrasonic echoes.

    PubMed

    Mor, Etai; Aladjem, Mayer; Azoulay, Amnon

    2015-02-01

    Ultrasonic pulse-echo methods have been used extensively in non-destructive testing of layered structures. In acoustic measurements on thin layers, the resulting echoes from two successive interfaces overlap in time, making it difficult to assess the individual echo parameters. Over the last decade sparse approximation methods have been extensively used to address this issue. These methods employ a large dictionary of elementary functions (atoms) and attempt to select the smallest subset of atoms (sparsest approximation) that represent the ultrasonic signal accurately. In this paper we propose the cluster-enhanced sparse approximation (CESA) method for estimating overlapping ultrasonic echoes. CESA is specifically adapted to deal with a large number of signals acquired during an ultrasonic scan. It incorporates two principal algorithms. The first is a clustering algorithm, which divides a set of signals comprising an ultrasonic scan into groups of signals that can be approximated by the same set of atoms. The second is a two-stage iterative algorithm, which alternates between update of the atoms associated with each cluster, and re-clustering of the signals according to the updated atoms. Because CESA operates on clusters of signals, it achieves improved results in terms of approximation error and computation time compared with conventional sparse methods, which operate on each signal separately. The superior ability of CESA to approximate highly overlapping ultrasonic echoes is demonstrated through simulation and experiments on adhesively bonded structures. PMID:25643086

  17. Motor Protein Accumulation on Antiparallel Microtubule Overlaps

    NASA Astrophysics Data System (ADS)

    Kuan, Hui-Shun; Betterton, Meredith D.

    2016-05-01

    Biopolymers serve as one-dimensional tracks on which motor proteins move to perform their biological roles. Motor protein phenomena have inspired theoretical models of one-dimensional transport, crowding, and jamming. Experiments studying the motion of Xklp1 motors on reconstituted antiparallel microtubule overlaps demonstrated that motors recruited to the overlap walk toward the plus end of individual microtubules and frequently switch between filaments. We study a model of this system that couples the totally asymmetric simple exclusion process (TASEP) for motor motion with switches between antiparallel filaments and binding kinetics. We determine steady-state motor density profiles for fixed-length overlaps using exact and approximate solutions of the continuum differential equations and compare to kinetic Monte Carlo simulations. Overlap motor density profiles and motor trajectories resemble experimental measurements. The phase diagram of the model is similar to the single-filament case for low switching rate, while for high switching rate we find a new low density-high density-low density-high density phase. The overlap center region, far from the overlap ends, has a constant motor density as one would naively expect. However, rather than following a simple binding equilibrium, the center motor density depends on total overlap length, motor speed, and motor switching rate. The size of the crowded boundary layer near the overlap ends is also dependent on the overlap length and switching rate in addition to the motor speed and bulk concentration. The antiparallel microtubule overlap geometry may offer a previously unrecognized mechanism for biological regulation of protein concentration and consequent activity.

  18. Motor Protein Accumulation on Antiparallel Microtubule Overlaps.

    PubMed

    Kuan, Hui-Shun; Betterton, Meredith D

    2016-05-10

    Biopolymers serve as one-dimensional tracks on which motor proteins move to perform their biological roles. Motor protein phenomena have inspired theoretical models of one-dimensional transport, crowding, and jamming. Experiments studying the motion of Xklp1 motors on reconstituted antiparallel microtubule overlaps demonstrated that motors recruited to the overlap walk toward the plus end of individual microtubules and frequently switch between filaments. We study a model of this system that couples the totally asymmetric simple exclusion process for motor motion with switches between antiparallel filaments and binding kinetics. We determine steady-state motor density profiles for fixed-length overlaps using exact and approximate solutions of the continuum differential equations and compare to kinetic Monte Carlo simulations. Overlap motor density profiles and motor trajectories resemble experimental measurements. The phase diagram of the model is similar to the single-filament case for low switching rate, while for high switching rate we find a new (to our knowledge) low density-high density-low density-high density phase. The overlap center region, far from the overlap ends, has a constant motor density as one would naïvely expect. However, rather than following a simple binding equilibrium, the center motor density depends on total overlap length, motor speed, and motor switching rate. The size of the crowded boundary layer near the overlap ends is also dependent on the overlap length and switching rate in addition to the motor speed and bulk concentration. The antiparallel microtubule overlap geometry may offer a previously unrecognized mechanism for biological regulation of protein concentration and consequent activity. PMID:27166811

  19. Spectral-overlap approach to multiframe superresolution image reconstruction.

    PubMed

    Cohen, Edward; Picard, Richard H; Crabtree, Peter N

    2016-05-20

    Various techniques and algorithms have been developed to improve the resolution of sensor-aliased imagery captured with multiple subpixel-displaced frames on an undersampled pixelated image plane. These dealiasing algorithms are typically known as multiframe superresolution (SR), or geometric SR to emphasize the role of the focal-plane array. Multiple low-resolution (LR) aliased frames of the same scene are captured and allocated to a common high-resolution (HR) reconstruction grid, leading to the possibility of an alias-free reconstruction, as long as the HR sampling rate is above the Nyquist rate. Allocating LR-frame irradiances to HR frames requires the use of appropriate weights. Here we present a novel approach in the spectral domain to calculating exactly weights based on spatial overlap areas, which we call the spectral-overlap (SO) method. We emphasize that the SO method is not a spectral approach but rather an approach to calculating spatial weights that uses spectral decompositions to exploit the array properties of the HR and LR pixels. The method is capable of dealing with arbitrary aliasing factors and interframe motions consisting of in-plane translations and rotations. We calculate example reconstructed HR images (the inverse problem) from synthetic aliased images for integer and for fractional aliasing factors. We show the utility of the SO-generated overlap-area weights in both noniterative and iterative reconstructions with known or unknown aliasing factor. We show how the overlap weights can be used to generate the Green's function (pixel response function) for noniterative dealiasing. In addition, we show how the overlap-area weights can be used to generate synthetic aliased images (the forward problem). We compare the SO approach to the spatial-domain geometric approach of O'Rourke and find virtually identical high accuracy but with significant enhancements in speed for SO. We also compare the SO weights to interpolated weights and find that

  20. Optical properties of CdTe- Cd0.90Mn0.10Te multiple quantum well structures grown by pulsed laser evaporation and epitaxy

    NASA Astrophysics Data System (ADS)

    Dubowski, J. J.; Roth, A. P.; Deleporte, E.; Peter, G.; Feng, Z. C.; Perkowitz, S.

    1992-02-01

    Low-temperature photoluminescence, photoluminescence excitation and Raman spectroscopy measurements of CdTeCd 0.90Mn 0.10Te multiple quantum well (MQW) structures grown by pulsed laser evaporation and epitaxy (PLEE) on (001) Cd 1- xZn xTe substrates are carried out. The samples are grown from fluxes of Cd-Te and Cd-Mn-Te provided by ablation of solid CdTe and Cd 0.93Mn 0.07Te targets with Nd:YAG and excimer XeCl lasers, respectively. The excitonic lines corresponding to the quantum well E 1-HH 1 transition are investigated. Comparison between the observed PL excitonic emissions and calculated energy levels using a Kronig-Penney model with the well width as a fitting parameter allowed us to determine the "optical" well widths of the samples and to compare them with those determined from secondary ion mass spectroscopy in-depth profiles. Raman spectra for non-resonance excitation at 501.7 nm are dominated by the CdTe-like longitudinal optical (LO) modes at 166 cm -1 and MnTe-like LO modes at 194 cm -1 from the Cd 0.90Mn 0.10Te barriers. Under resonance conditions, with excitation at 476.5 nm the CdTe LO, 2LO and 3LO modes from the wells near 170,340 and 510 cm -1 dominate the spectra. The results clearly indicate that the PLEE-grown MQWs have the characteristics of the best currently available material.

  1. Injection current dependences of electroluminescence transition energy in InGaN/GaN multiple quantum wells light emitting diodes under pulsed current conditions

    SciTech Connect

    Zhang, Feng; Ikeda, Masao Liu, Jianping; Zhang, Shuming; Zhou, Kun; Yang, Hui; Liu, Zongshun

    2015-07-21

    Injection current dependences of electroluminescence transition energy in blue InGaN/GaN multiple quantum wells light emitting diodes (LEDs) with different quantum barrier thicknesses under pulsed current conditions have been analyzed taking into account the related effects including deformation caused by lattice strain, quantum confined Stark effects due to polarization field partly screened by carriers, band gap renormalization, Stokes-like shift due to compositional fluctuations which are supposed to be random alloy fluctuations in the sub-nanometer scale, band filling effect (Burstein-Moss shift), and quantum levels in finite triangular wells. The bandgap renormalization and band filling effect occurring at high concentrations oppose one another, however, the renormalization effect dominates in the concentration range studied, since the band filling effect arising from the filling in the tail states in the valence band of quantum wells is much smaller than the case in the bulk materials. In order to correlate the carrier densities with current densities, the nonradiative recombination rates were deduced experimentally by curve-fitting to the external quantum efficiencies. The transition energies in LEDs both with 15 nm quantum barriers and 5 nm quantum barriers, calculated using full strengths of theoretical macroscopic polarization given by Barnardini and Fiorentini [Phys. Status Solidi B 216, 391 (1999)] are in excellent accordance with experimental results. The LED with 5 nm barriers has been shown to exhibit a higher transition energy and a smaller blue shift than those of LED with 15 nm barriers, which is mainly caused by the smaller internal polarization field in the quantum wells.

  2. Standardless multicomponent qNMR analysis of compounds with overlapped resonances based on the combination of ICA and PULCON.

    PubMed

    Monakhova, Yulia B; Lachenmeier, Dirk W; Kuballa, Thomas; Mushtakova, Svetlana P

    2015-10-01

    A fast and reliable nuclear magnetic resonance (NMR) method for quantitative analysis of targeted compounds with overlapped signals in complex mixtures has been established. The method is based on the combination of chemometric treatment for spectra deconvolution and the PULCON principle (pulse length based concentration determination) for quantification. Independent component analysis (ICA) (mutual information least dependent component analysis (MILCA) algorithm) was applied for spectra deconvolution in up to six component mixtures with known composition. The resolved matrices (independent components, ICs and ICA scores) were used for identification of analytes, calculating their relative concentrations and absolute integral intensity of selected resonances. The absolute analyte concentrations in multicomponent mixtures and authentic samples were then calculated using the PULCON principle. Instead of conventional application of absolute integral intensity in case of undisturbed signals, the multiplication of resolved IC absolute integral and its relative concentration in the mixture for each component was used. Correction factors that are required for quantification and are unique for each analyte were also estimated. The proposed method was applied for analysis of up to five components in lemon and orange juice samples with recoveries between 90% and 111%. The total duration of analysis is approximately 45 min including measurements, spectra decomposition and quantification. The results demonstrated that the proposed method is a promising tool for rapid simultaneous quantification of up to six components in case of spectral overlap and the absence of reference materials. PMID:26132651

  3. Plasma-induced spectral broadening of high-energy ultrashort laser pulses in a helium-filled multiple-pass cell

    SciTech Connect

    Nurhuda, Muhammad; Suda, Akira; Midorikawa, Katsumi

    2006-09-15

    We investigated the possibility of plasma-induced spectral broadening of high-energy ultrashort laser pulses in a helium-filled multipass cell (MPC) through a series of full numerical simulations of the extended nonlinear Schroedinger equation. It was found that the gas pressure must be set low so that the propagation dynamics can be controlled only by plasma defocusing. Simulations using 100 mJ, 40 fs laser pulses in the MPC, which is 6 m long and has a mirror of 3.1 m radius at each end, showed that if the gas pressure is set within the range of 40-130 Pa, then the relevant spectral broadening can be obtained after five passes, yielding compressed pulses of a 4.7-6.4 fs width. The ratio of the energy of the compressed pulse to the output pulse is found to be within 58-88%.

  4. An experimental comparison of triggered and random pulse train uncertainties

    SciTech Connect

    Henzlova, Daniela; Menlove, Howard O; Swinhoe, Martyn T

    2010-01-01

    In this paper we present an experimental comparison of signal-triggered and randomly triggered based analysis algorithms of neutron multiplicity data. Traditional shift register type signal-triggered multiplicity analysis of singles, doubles and triples rates is compared with analysis using randomly triggered gates. Two methods of random gate generation are explored - non-overlapping gates (Feyrunan approach) and periodic overlapping gates (fast accidentals). Using californium sources with low, medium and high rate in combination with AmLi sources (as a surrogate for plutonium) we investigate relative standard deviation (RSD) of data in order to determine if there are parameter spaces in which one of the measurement methods should be preferred. Neutron correlation analysis is a commonly used NDA technique to assay plutonium mass. The data can be collected in two distinct ways: using signal-triggered or randomly triggered counting gates. Analysis algorithms were developed for both approaches to determine singles (S), doubles (D) and triples (7) rates from the measured sample. Currently the most commonly implemented technique to collect neutron coincidence data utilizes shift register based electronics. Shift register uses signal-triggered counting gates to generate foreground multiplicity distribution of correlated+accidental events and a random gate (opened after a predefined long delay following the signal trigger) to generate background multiplicity distribution of accidental events. Modern shift registers include fast accidental option to sample data with a fixed clock frequency. This way a set of overlapping gates is used to generate background multiplicity distributions in order to improve the measurement precision. In parallel to shift register approach the Feynman variance technique is frequently used, which utilizes set of consecutive non-overlapping gates. In general, different user communities (e.g. safeguards, nuclear material accountancy, emergency

  5. Efficient optical pulse stacker system

    DOEpatents

    Seppala, Lynn G.; Haas, Roger A.

    1982-01-01

    Method and apparatus for spreading and angle-encoding each pulse of a multiplicity of small area, short pulses into several temporally staggered pulses by use of appropriate beam splitters, with the optical elements being arranged so that each staggered pulse is contiguous with one or two other such pulses, and the entire sequence of stacked pulses comprising a single, continuous long pulse. The single long pulse is expanded in area, and then doubly passed through a nonstorage laser amplifier such as KrF. After amplification, the physically separated, angle-encoded and temporally staggered pulses are recombined into a single pulse of short duration. This high intensity output beam is well collimated and may be propagated over long distance, or used for irradiating inertial confinement fusion targets.

  6. Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction

    PubMed Central

    2010-01-01

    Background With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and apply it to de novo sequencing of new organisms. As an example, this paper demonstrates how such extra information can be used to improve de novo assemblies by augmenting the overlapping step. Finding all pairs of overlapping reads is a key task in many genome assemblers, and to this end, highly efficient algorithms have been developed to find alignments in large collections of sequences. It is well known that due to repeated sequences, many aligned pairs of reads nevertheless do not overlap. But no overlapping algorithm to date takes a rigorous approach to separating aligned but non-overlapping read pairs from true overlaps. Results We present an approach that extends the Minimus assembler by a data driven step to classify overlaps as true or false prior to contig construction. We trained several different classification models within the Weka framework using various statistics derived from overlaps of reads available from prior sequencing projects. These statistics included percent mismatch and k-mer frequencies within the overlaps as well as a comparative genomics score derived from mapping reads to multiple reference genomes. We show that in real whole-genome sequencing data from the E. coli and S. aureus genomes, by providing a curated set of overlaps to the contigging phase of the assembler, we nearly doubled the median contig length (N50) without sacrificing coverage of the genome or increasing the number of mis-assemblies. Conclusions Machine learning methods that use comparative and non-comparative features to classify overlaps as true or false can be used to improve the quality of a sequence assembly. PMID:20078885

  7. PULSE AMPLITUDE ANALYZERS

    DOEpatents

    Gray, G.W.; Jensen, A.S.

    1958-06-01

    An analyzer system incorporating a cathode-ray tube and linearly spaced targets masked by a plate having slits at points corresponding to the location of the targets is described. The advantages of the system include reduction in the required amplified band width and also the reduction in possible double counting of a pulse by striking two targets. The system comprises integrating means for each pulse, the signal from which is applied to a pair of deflection plates, and a control circuit for turning on the electron beam when the pulse has almost reached its maximum value. The mask prevents the beam from overlapping on a target adjacent to the proper one, while a control circuit responsive to the target output signals acts to cut off the beam immediately after the beam strikes a target to permit the beam to impinge on only one target.

  8. A Partitioning Algorithm for Block-Diagonal Matrices With Overlap

    SciTech Connect

    Guy Antoine Atenekeng Kahou; Laura Grigori; Masha Sosonkina

    2008-02-02

    We present a graph partitioning algorithm that aims at partitioning a sparse matrix into a block-diagonal form, such that any two consecutive blocks overlap. We denote this form of the matrix as the overlapped block-diagonal matrix. The partitioned matrix is suitable for applying the explicit formulation of Multiplicative Schwarz preconditioner (EFMS) described in [3]. The graph partitioning algorithm partitions the graph of the input matrix into K partitions, such that every partition {Omega}{sub i} has at most two neighbors {Omega}{sub i-1} and {Omega}{sub i+1}. First, an ordering algorithm, such as the reverse Cuthill-McKee algorithm, that reduces the matrix profile is performed. An initial overlapped block-diagonal partition is obtained from the profile of the matrix. An iterative strategy is then used to further refine the partitioning by allowing nodes to be transferred between neighboring partitions. Experiments are performed on matrices arising from real-world applications to show the feasibility and usefulness of this approach.

  9. A Stochastic Model for Detecting Overlapping and Hierarchical Community Structure

    PubMed Central

    Cao, Xiaochun; Wang, Xiao; Jin, Di; Guo, Xiaojie; Tang, Xianchao

    2015-01-01

    Community detection is a fundamental problem in the analysis of complex networks. Recently, many researchers have concentrated on the detection of overlapping communities, where a vertex may belong to more than one community. However, most current methods require the number (or the size) of the communities as a priori information, which is usually unavailable in real-world networks. Thus, a practical algorithm should not only find the overlapping community structure, but also automatically determine the number of communities. Furthermore, it is preferable if this method is able to reveal the hierarchical structure of networks as well. In this work, we firstly propose a generative model that employs a nonnegative matrix factorization (NMF) formulization with a l2,1 norm regularization term, balanced by a resolution parameter. The NMF has the nature that provides overlapping community structure by assigning soft membership variables to each vertex; the l2,1 regularization term is a technique of group sparsity which can automatically determine the number of communities by penalizing too many nonempty communities; and hence the resolution parameter enables us to explore the hierarchical structure of networks. Thereafter, we derive the multiplicative update rule to learn the model parameters, and offer the proof of its correctness. Finally, we test our approach on a variety of synthetic and real-world networks, and compare it with some state-of-the-art algorithms. The results validate the superior performance of our new method. PMID:25822148

  10. Abnormal Policy Detection and Correction Using Overlapping Transition

    NASA Astrophysics Data System (ADS)

    Kim, Sunghyun; Lee, Heejo

    Policy in security devices such as firewalls and Network Intrusion Prevention Systems (NIPS) is usually implemented as a sequence of rules. This allows network packets to proceed or to be discarded based on rule's decision. Since attack methods are increasing rapidly, a huge number of security rules are generated and maintained in security devices. Under attack or during heavy traffic, the policy configured wrong creates security holes and prevents the system from deciding quickly whether to allow or deny a packet. Anomalies between the rules occur when there is overlap among the rules. In this paper, we propose a new method to detect anomalies among rules and generate new rules without configuration error in multiple security devices as well as in a single security device. The proposed method cuts the overlap regions among rules into minimum overlap regions and finds the abnormal domain regions of rules' predicates. Classifying rules by the network traffic flow, the proposed method not only reduces computation overhead but blocks unnecessary traffic among distributed devices.

  11. A stochastic model for detecting overlapping and hierarchical community structure.

    PubMed

    Cao, Xiaochun; Wang, Xiao; Jin, Di; Guo, Xiaojie; Tang, Xianchao

    2015-01-01

    Community detection is a fundamental problem in the analysis of complex networks. Recently, many researchers have concentrated on the detection of overlapping communities, where a vertex may belong to more than one community. However, most current methods require the number (or the size) of the communities as a priori information, which is usually unavailable in real-world networks. Thus, a practical algorithm should not only find the overlapping community structure, but also automatically determine the number of communities. Furthermore, it is preferable if this method is able to reveal the hierarchical structure of networks as well. In this work, we firstly propose a generative model that employs a nonnegative matrix factorization (NMF) formulization with a l(2,1) norm regularization term, balanced by a resolution parameter. The NMF has the nature that provides overlapping community structure by assigning soft membership variables to each vertex; the l(2,1) regularization term is a technique of group sparsity which can automatically determine the number of communities by penalizing too many nonempty communities; and hence the resolution parameter enables us to explore the hierarchical structure of networks. Thereafter, we derive the multiplicative update rule to learn the model parameters, and offer the proof of its correctness. Finally, we test our approach on a variety of synthetic and real-world networks, and compare it with some state-of-the-art algorithms. The results validate the superior performance of our new method. PMID:25822148

  12. Finding Genetic Overlaps Among Diseases Based on Ranked Gene Lists

    PubMed Central

    Chen, Quan; Zhou, Xianghong J.

    2015-01-01

    Abstract To understand disease relationships in terms of their genetic mechanisms, it is important to study the common genetic basis among different diseases. Although discoveries on pleiotropic genes related to multiple diseases abound, methods flexibly applicable to various types of datasets generated from different studies or experiments are needed to gain big pictures on the genetic relationships among a large number of diseases. We develop a set of genetic similarity measures to gauge the genetic overlap between diseases, as well as several estimators of the number of overlapping disease genes between diseases. These methods are based on ranked gene lists so that they could be flexibly applied to different types of data. We first investigate the performance of the genetic similarity measure for evaluating the similarity between human diseases in simulation studies. Then we apply the method to diseases in the OMIM database. We show that our proposed genetic measure achieves superior performance in explaining phenotype similarities between diseases compared to simpler methods. Furthermore, we identified common genes underlying the genetic overlap between disease pairs. With an example of five vision-related diseases, we demonstrate how our methods can provide insights into the relationships among diseases based on their shared genetic mechanisms. PMID:25684200

  13. Pulse properties of terrestrial gamma-ray flashes detected by the Fermi Gamma-Ray Burst Monitor

    NASA Astrophysics Data System (ADS)

    Foley, S.; Fitzpatrick, G.; Briggs, M. S.; Connaughton, V.; Tierney, D.; McBreen, S.; Dwyer, J. R.; Chaplin, V. L.; Bhat, P. N.; Byrne, D.; Cramer, E.; Fishman, G. J.; Xiong, S.; Greiner, J.; Kippen, R. M.; Meegan, C. A.; Paciesas, W. S.; Preece, R. D.; Kienlin, A.; Wilson-Hodge, C.

    2014-07-01

    The Gamma-ray Burst Monitor (GBM) on board the Fermi Gamma-ray Space Telescope has triggered on over 300 terrestrial gamma-ray flashes (TGFs) since its launch in June 2008. With 14 detectors, GBM collects on average ˜100 counts per triggered TGF, enabling unprecedented studies of the time profiles of TGFs. Here we present the first rigorous analysis of the temporal properties of a large sample of TGFs (278), including the distributions of the rise and fall times of the individual pulses and their durations. A variety of time profiles are observed with 19% of TGFs having multiple pulses separated in time and 31 clear cases of partially overlapping pulses. The effect of instrumental dead time and pulse pileup on the temporal properties are also presented. As the observed gamma ray pulse structure is representative of the electron flux at the source, TGF pulse parameters are critical to distinguish between relativistic feedback discharge and lightning leader models. We show that at least 67% of TGFs at satellite altitudes are significantly asymmetric. For the asymmetric pulses, the rise times are almost always shorter than the fall times. Those which are not are consistent with statistical fluctuations. The median rise time for asymmetric pulses is ˜3 times shorter than for symmetric pulses while their fall times are comparable. The asymmetric shapes observed are consistent with the relativistic feedback discharge model when Compton scattering of photons between the source and Fermi is included, and instrumental effects are taken into account.

  14. Automatic segmentation of overlapping and touching chromosomes

    NASA Astrophysics Data System (ADS)

    Yuan, Zhiqiang; Chen, Xiaohua; Zhang, Renli; Yu, Chang

    2001-09-01

    This paper describes a technique to segment overlapping and touching chromosomes of human metaphase cells. Automated chromosome classification has been an important pattern recognition problem for decades, numerous attempts were made in the past to characterize chromosome band patterns. But successful separation between touching and overlapping chromosomes is vital for correct classification. Since chromosomes are non-rigid objects, common methods for separation between touching chromosomes are not usable. We proposed a method using shape concave and convex information, topology analysis information, and band pale paths for segmentation of touching and overlapping chromosomes. To detect shape concave and convex information, we should first pre-segment the chromosomes and get the edge of overlapping and touching chromosomes. After filtering the original image using edge-preserving filter, we adopt the Otsu's segmentation method and extract the boundary of chromosomes. Hence the boundary can be used for segment the overlapping and touching chromosomes by detecting the concave and convex information based on boundary information. Most of the traditional boundary-based algorithms detect corners based on two steps: the first step is to acquire the smoothed version of curvature at every point along the contour, and the second step is to detect the positions where curvature maximal occur and threshold the curvature as corner points. Recently wavelet transform has been adopted into corner detection algorithms. Since the metaphase overlapping chromosomes has multi-scale corners, we adopt a multi-scale corner detection method based on Hua's method for corner detection. For touching chromosomes, it is convenient to split them using pale paths. Starting from concave corner points, a search algorithm is represented. The searching algorithm traces three pixels into the object in the direction of the normal vector in order to avoid stopping at the initial boundary until it

  15. Optimal Blood Suppression Inversion Time Based on Breathing Rates and Heart Rates to Improve Renal Artery Visibility in Spatial Labeling with Multiple Inversion Pulses: A Preliminary Study

    PubMed Central

    Pei, Yigang; Li, Fang; Shen, Hao; Long, Xueying; Liu, Hui; Wang, Xiaoyi; Liu, Jinkang

    2016-01-01

    Objective To determine whether an optimal blood suppression inversion time (BSP TI) can boost arterial visibility and whether the optimal BSP TI is related to breathing rate (BR) and heart rate (HR) for hypertension subjects in spatial labeling with multiple inversion pulses (SLEEK). Materials and Methods This prospective study included 10 volunteers and 93 consecutive hypertension patients who had undergone SLEEK at 1.5T MRI system. Firstly, suitable BSP TIs for displaying clearly renal artery were determined in 10 volunteers. Secondly, non-contrast enhanced magnetic resonance angiography with the suitable BSP TIs were performed on those hypertension patients. Then, renal artery was evaluated and an optimal BSP TI to increase arterial visibility was determined for each patient. Patients' BRs and HRs were recorded and their relationships with the optimal BSP TI were analyzed. Results The optimal BSP TI was negatively correlated with BR (r1 = -0.536, P1 < 0.001; and r2 = -0.535, P2 < 0.001) and HR (r1 = -0.432, P1 = 0.001; and r2 = -0.419, P2 = 0.001) for 2 readers (κ = 0.93). For improving renal arterial visibility, BSP TI = 800 ms could be applied as the optimal BSP TI when the 95% confidence interval were 17-19/min (BR1) and 74-82 bpm (HR1) for reader#1 and 17-19/min (BR2) and 74-83 bpm (HR2) for reader#2; BSP TI = 1100 ms while 14-15/min (BR1, 2) and 71-76 bpm (HR1, 2) for both readers; and BSP TI = 1400 ms when 13-16/min (BR1) and 63-68 bpm (HR1) for reader#1 and 14-15/min (BR2) and 64-70 bpm (HR2) for reader#2. Conclusion In SLEEK, BSP TI is affected by patients' BRs and HRs. Adopting the optimal BSP TI based on BR and HR can improve the renal arterial visibility and consequently the working efficiency. PMID:26798218

  16. Stochastic Maximum Likelihood (SML) parametric estimation of overlapped Doppler echoes

    NASA Astrophysics Data System (ADS)

    Boyer, E.; Petitdidier, M.; Larzabal, P.

    2004-11-01

    This paper investigates the area of overlapped echo data processing. In such cases, classical methods, such as Fourier-like techniques or pulse pair methods, fail to estimate the first three spectral moments of the echoes because of their lack of resolution. A promising method, based on a modelization of the covariance matrix of the time series and on a Stochastic Maximum Likelihood (SML) estimation of the parameters of interest, has been recently introduced in literature. This method has been tested on simulations and on few spectra from actual data but no exhaustive investigation of the SML algorithm has been conducted on actual data: this paper fills this gap. The radar data came from the thunderstorm campaign that took place at the National Astronomy and Ionospheric Center (NAIC) in Arecibo, Puerto Rico, in 1998.

  17. Generating Composite Overlapping Grids on CAD Geometries

    SciTech Connect

    Henshaw, W.D.

    2002-02-07

    We describe some algorithms and tools that have been developed to generate composite overlapping grids on geometries that have been defined with computer aided design (CAD) programs. This process consists of five main steps. Starting from a description of the surfaces defining the computational domain we (1) correct errors in the CAD representation, (2) determine topology of the patched-surface, (3) build a global triangulation of the surface, (4) construct structured surface and volume grids using hyperbolic grid generation, and (5) generate the overlapping grid by determining the holes and the interpolation points. The overlapping grid generator which is used for the final step also supports the rapid generation of grids for block-structured adaptive mesh refinement and for moving grids. These algorithms have been implemented as part of the Overture object-oriented framework.

  18. Temporal niche overlap among insectivorous small mammals.

    PubMed

    Vieira, Emerson M; Paise, Gabriela

    2011-12-01

    Being active in the same environment at different times exposes animals to the effects of very different environmental factors, both biotic and abiotic. In the present study, we used live traps equipped with timing devices to evaluate the potential role of biotic factors (competition and food abundance) on overall overlap in the temporal niche axis of 4 insectivorous small mammals in high-elevation grassland fields ('campos de altitude') of southern Brazil. Based on resources availability (invertebrates), data on animal captures were pooled in 2 seasons: 'scarcity' (June 2001-September 2001) and 'abundance' (November 2001-May 2002) seasons. We tested for non-random structure in temporal niche overlap among the species in each season. These species were the rodents Oxymycterus nasutus (Waterhouse, 1837), Deltamys sp., Akodon azarae (Fischer, 1829), and the marsupial Monodelphis brevicaudis Olfers, 1818. The studied community was mainly diurnal with crepuscular peaks. Simulations using the Pianka index of niche overlap indicated that the empirical assemblage-wide overlap was not significantly different from randomly generated patterns in the abundance season but significantly greater than expected by chance alone in the scarcity season. All the species showed an increase in temporal niche breadth during the abundance season, which appears to be related to longer daylength and high nocturnal temperatures. Patterns on both temporal niche overlap and temporal niche breadth were the opposite to those that we were expecting in the case of diel activity patterns determined by competition for dietary resources. Therefore, we conclude that competition did not seem to be preponderant for determining patterns of temporal niche overlap by the studied community. PMID:22182329

  19. Sub-Plate Overlap Code Documentation

    NASA Technical Reports Server (NTRS)

    Taff, L. G.; Bucciarelli, B.; Zarate, N.

    1997-01-01

    An expansion of the plate overlap method of astrometric data reduction to a single plate has been proposed and successfully tested. Each plate is (artificially) divided into sub-plates which can then be overlapped. This reduces the area of a 'plate' over which a plate model needs to accurately represent the relationship between measured coordinates and standard coordinates. Application is made to non-astrographic plates such as Schmidt plates and to wide-field astrographic plates. Indeed, the method is completely general and can be applied to any type of recording media.

  20. Dynamics of overlapping structures in modular networks.

    PubMed

    Almendral, J A; Leyva, I; Li, D; Sendiña-Nadal, I; Havlin, S; Boccaletti, S

    2010-07-01

    Modularity is a fundamental feature of real networks, being intimately bounded to their functionality, i.e., to their capability of performing parallel tasks in a coordinated way. Although the modular structure of real graphs has been intensively studied, very little is known on the interactions between functional modules of a graph. Here, we present a general method based on synchronization of networking oscillators, that is able to detect overlapping structures in multimodular environments. We furthermore report the full analytical and theoretical description on the relationship between the overlapping dynamics and the underlying network topology. The method is illustrated by means of a series of applications. PMID:20866697

  1. Micro-Pulse Lidar Signals: Uncertainty Analysis

    NASA Technical Reports Server (NTRS)

    Welton, Ellsworth J.; Campbell, James R.; Starr, David OC. (Technical Monitor)

    2002-01-01

    Micro-pulse lidar (MPL) systems are small, autonomous, eye-safe lidars used for continuous observations of the vertical distribution of cloud and aerosol layers. Since the construction of the first MPL in 1993, procedures have been developed to correct for various instrument effects present in MPL signals. The primary instrument effects include afterpulse, laser-detector cross-talk, and overlap, poor near-range (less than 6 km) focusing. The accurate correction of both afterpulse and overlap effects are required to study both clouds and aerosols. Furthermore, the outgoing energy of the laser pulses and the statistical uncertainty of the MPL detector must also be correctly determined in order to assess the accuracy of MPL observations. The uncertainties associated with the afterpulse, overlap, pulse energy, detector noise, and all remaining quantities affecting measured MPL signals, are determined in this study. The uncertainties are propagated through the entire MPL correction process to give a net uncertainty on the final corrected MPL signal. The results show that in the near range, the overlap uncertainty dominates. At altitudes above the overlap region, the dominant source of uncertainty is caused by uncertainty in the pulse energy. However, if the laser energy is low, then during mid-day, high solar background levels can significantly reduce the signal-to-noise of the detector. In such a case, the statistical uncertainty of the detector count rate becomes dominant at altitudes above the overlap region.

  2. Signal-to-noise ratio requirements for detection of multiple pulses subject to partially correlated fading with chi-squared statistics of various degrees of freedom

    NASA Astrophysics Data System (ADS)

    Nuttall, Albert H.; Eby, Edward S.

    1986-06-01

    The transmitted signal in a fading medium is composed of several pulses separated in time so as to achieve diversity and thereby combat deep fades and loss of signal. Receiver processing consists of matched filtering of each of the pulses, followed by summation of the squared envelopes of all the filter outputs. In addition to additive Gaussian background noise, the signal is subject to slow medium fading which has a chi-squared first-order distribution and which may be correlated from pulse to pulse to an arbitrary degree. The false alarm and detection probabilities of this system are derived in various series expansions which are amenable to efficient computer evaluation. Programs are presented and exercised for various combinations of signal-to-noise ratio, number of pulses, degree of correlated fading, and (noninteger) number of degrees of freedom of the chi-squared fading. Required input signal-to-noise ratios for several false alarm and detection probabilities are computed and plotted for cases of the fading normalized correlation coefficient ranging from 0 to 1; results for a nonfading medium are superposed for easy comparison. Special cases are dependent and independent Rayleigh amplitude fading.

  3. Power divergences in overlapping Wilson lines

    NASA Astrophysics Data System (ADS)

    Berwein, Matthias

    2016-01-01

    We discuss the divergence structure of Wilson line operators with partially overlapping segments on the basis of the cyclic Wilson loop as an explicit example. The generalized exponentiation theorem is used to show the exponentiation and factorization of power divergences for certain linear combinations of associated loop functions.

  4. Overlapping Community Detection based on Network Decomposition

    NASA Astrophysics Data System (ADS)

    Ding, Zhuanlian; Zhang, Xingyi; Sun, Dengdi; Luo, Bin

    2016-04-01

    Community detection in complex network has become a vital step to understand the structure and dynamics of networks in various fields. However, traditional node clustering and relatively new proposed link clustering methods have inherent drawbacks to discover overlapping communities. Node clustering is inadequate to capture the pervasive overlaps, while link clustering is often criticized due to the high computational cost and ambiguous definition of communities. So, overlapping community detection is still a formidable challenge. In this work, we propose a new overlapping community detection algorithm based on network decomposition, called NDOCD. Specifically, NDOCD iteratively splits the network by removing all links in derived link communities, which are identified by utilizing node clustering technique. The network decomposition contributes to reducing the computation time and noise link elimination conduces to improving the quality of obtained communities. Besides, we employ node clustering technique rather than link similarity measure to discover link communities, thus NDOCD avoids an ambiguous definition of community and becomes less time-consuming. We test our approach on both synthetic and real-world networks. Results demonstrate the superior performance of our approach both in computation time and accuracy compared to state-of-the-art algorithms.

  5. Liberal Education: An Overlapping Pragmatic Consensus.

    ERIC Educational Resources Information Center

    Paris, David C.; Kimball, Bruce A.

    2000-01-01

    Suggests in Bruce Kimball's thesis that a pragmatic consensus was emerging about the understanding of liberal education offers that it might be best understood by comparing it to J. Rawl's idea of an "overlapping consensus." States that by comparing and contrasting these ideas that the emerging consensus is pragmatic in nature. (CMK)

  6. Overlapping Community Detection based on Network Decomposition

    PubMed Central

    Ding, Zhuanlian; Zhang, Xingyi; Sun, Dengdi; Luo, Bin

    2016-01-01

    Community detection in complex network has become a vital step to understand the structure and dynamics of networks in various fields. However, traditional node clustering and relatively new proposed link clustering methods have inherent drawbacks to discover overlapping communities. Node clustering is inadequate to capture the pervasive overlaps, while link clustering is often criticized due to the high computational cost and ambiguous definition of communities. So, overlapping community detection is still a formidable challenge. In this work, we propose a new overlapping community detection algorithm based on network decomposition, called NDOCD. Specifically, NDOCD iteratively splits the network by removing all links in derived link communities, which are identified by utilizing node clustering technique. The network decomposition contributes to reducing the computation time and noise link elimination conduces to improving the quality of obtained communities. Besides, we employ node clustering technique rather than link similarity measure to discover link communities, thus NDOCD avoids an ambiguous definition of community and becomes less time-consuming. We test our approach on both synthetic and real-world networks. Results demonstrate the superior performance of our approach both in computation time and accuracy compared to state-of-the-art algorithms. PMID:27066904

  7. Autism and ADHD: Overlapping and Discriminating Symptoms

    ERIC Educational Resources Information Center

    Mayes, Susan Dickerson; Calhoun, Susan L.; Mayes, Rebecca D.; Molitoris, Sarah

    2012-01-01

    Children with ADHD and autism have some similar features, complicating a differential diagnosis. The purpose of our study was to determine the degree to which core ADHD and autistic symptoms overlap in and discriminate between children 2-16 years of age with autism and ADHD. Our study demonstrated that 847 children with autism were easily…

  8. Overlapping Community Detection based on Network Decomposition.

    PubMed

    Ding, Zhuanlian; Zhang, Xingyi; Sun, Dengdi; Luo, Bin

    2016-01-01

    Community detection in complex network has become a vital step to understand the structure and dynamics of networks in various fields. However, traditional node clustering and relatively new proposed link clustering methods have inherent drawbacks to discover overlapping communities. Node clustering is inadequate to capture the pervasive overlaps, while link clustering is often criticized due to the high computational cost and ambiguous definition of communities. So, overlapping community detection is still a formidable challenge. In this work, we propose a new overlapping community detection algorithm based on network decomposition, called NDOCD. Specifically, NDOCD iteratively splits the network by removing all links in derived link communities, which are identified by utilizing node clustering technique. The network decomposition contributes to reducing the computation time and noise link elimination conduces to improving the quality of obtained communities. Besides, we employ node clustering technique rather than link similarity measure to discover link communities, thus NDOCD avoids an ambiguous definition of community and becomes less time-consuming. We test our approach on both synthetic and real-world networks. Results demonstrate the superior performance of our approach both in computation time and accuracy compared to state-of-the-art algorithms. PMID:27066904

  9. Stochastic Cooling with Schottky Band Overlap

    SciTech Connect

    Lebedev, Valeri

    2006-03-20

    Optimal use of stochastic cooling is essential to maximize the antiproton stacking rate for Tevatron Run II. Good understanding and characterization of the cooling is important for the optimization. The paper is devoted to derivation of the Fokker-Plank equations justified in the case of near or full Schottky base overlap for both longitudinal and transverse coolings.

  10. On the radiative properties of soot aggregates part 1: Necking and overlapping

    NASA Astrophysics Data System (ADS)

    Yon, J.; Bescond, A.; Liu, F.

    2015-09-01

    There is a strong interest in accurately modelling the radiative properties of soot aggregates (also known as black carbon particles) emitted from combustion systems and fires to gain improved understanding of the role of black carbon to global warming. This study conducted a systematic investigation of the effects of overlapping and necking between neighbouring primary particles on the radiative properties of soot aggregates using the discrete dipole approximation. The degrees of overlapping and necking are quantified by the overlapping and necking parameters. Realistic soot aggregates were generated numerically by constructing overlapping and necking to fractal aggregates formed by point-touch primary particles simulated using a diffusion-limited cluster aggregation algorithm. Radiative properties (differential scattering, absorption, total scattering, specific extinction, asymmetry factor and single scattering albedo) were calculated using the experimentally measured soot refractive index over the spectral range of 266-1064 nm for 9 combinations of the overlapping and necking parameters. Overlapping and necking affect significantly the absorption and scattering properties of soot aggregates, especially in the near UV spectrum due to the enhanced multiple scattering effects within an aggregate. By using correctly modified aggregate properties (fractal dimension, prefactor, primary particle radius, and the number of primary particle) and by accounting for the effects of multiple scattering, the simple Rayleigh-Debye-Gans theory for fractal aggregates can reproduce reasonably accurate radiative properties of realistic soot aggregates.

  11. ELECTRIC PULSE GENERATOR

    DOEpatents

    Buntenbach, R.W.

    1959-06-01

    S>An electro-optical apparatus is described which produces electric pulses in programmed sequences at times and durations controlled with great accuracy. An oscilloscope CRT is supplied with signals to produce a luminous spot moving in a circle. An opaque mask with slots of variable width transmits light from the spot to a photoelectric transducer. For shorter pulse decay times a CRT screen which emits UV can be used with a UVtransmitting filter and a UV- sensitive photoelectric cell. Pulses are varied by changing masks or by using masks with variable slots. This device may be used in multiple arrangements to produce other pulse aT rangements, or it can be used to trigger an electronic pulse generator. (T.R.H.)

  12. Coherent propagation of a single photon in a lossless medium: 0π pulse formation, storage, and retrieval in multiple temporal modes

    NASA Astrophysics Data System (ADS)

    Petrosyan, Sh.; Malakyan, Yu.

    2013-12-01

    Single-photon coherent optics represents a fundamental importance for the investigation of quantum light-matter interactions. While most work has considered the interaction in the steady-state regime, here we demonstrate that a single-photon pulse shorter than any relaxation time in a medium propagates without energy loss and is consistently transformed into a zero-area pulse. A general analytical solution is found for photon passage through a cold ensemble of Λ-type atoms confined inside a hollow core of a single-mode photonic-crystal fiber. We use the robust far-off-resonant Raman scheme to control the pulse reshaping by an intense control laser beam and show that in the case of cw control field, for exact two-photon resonance, the outgoing photon displays an oscillating temporal distribution, which is the quantum counterpart of a classical field ringing, while for nonzero two-photon detuning a slow photon is produced. We demonstrate also that a train of readout control pulses coherently recalls the stored photon in many well-separated temporal modes, thus producing time-bin entangled single-photon states. Such states, which allow sharing quantum information among many users, are highly demanded for applications in long-distance quantum communication.

  13. Optimized spatial overlap in optical pump-X-ray probe experiments with high repetition rate using laser-induced surface distortions.

    PubMed

    Reinhardt, Matthias; Koc, Azize; Leitenberger, Wolfram; Gaal, Peter; Bargheer, Matias

    2016-03-01

    Ultrafast X-ray diffraction experiments require careful adjustment of the spatial overlap between the optical excitation and the X-ray probe pulse. This is especially challenging at high laser repetition rates. Sample distortions caused by the large heat load on the sample and the relatively low optical energy per pulse lead to only tiny signal changes. In consequence, this results in small footprints of the optical excitation on the sample, which turns the adjustment of the overlap difficult. Here a method for reliable overlap adjustment based on reciprocal space mapping of a laser excited thin film is presented. PMID:26917135

  14. Vacuum structure as seen by overlap fermions

    SciTech Connect

    Ilgenfritz, E.-M.; Koller, K.; Koma, Y.; Schierholz, G.; Streuer, T.; Weinberg, V.

    2007-02-27

    Three complementary views on the QCD vacuum structure, all based on eigenmodes of the overlap operator, are reported in their interrelation: (i) spectral density, localization and chiral properties of the modes, (ii) the possibility of filtering the field strength with the aim to detect selfdual and antiselfdual domains and (iii) the various faces of the topological charge density, with and without a cutoff {lambda}cut = O({lambda}QCD). The techniques are tested on quenched SU(3) configurations.

  15. Function approximation using adaptive and overlapping intervals

    SciTech Connect

    Patil, R.B.

    1995-05-01

    A problem common to many disciplines is to approximate a function given only the values of the function at various points in input variable space. A method is proposed for approximating a function of several to one variable. The model takes the form of weighted averaging of overlapping basis functions defined over intervals. The number of such basis functions and their parameters (widths and centers) are automatically determined using given training data and a learning algorithm. The proposed algorithm can be seen as placing a nonuniform multidimensional grid in the input domain with overlapping cells. The non-uniformity and overlap of the cells is achieved by a learning algorithm to optimize a given objective function. This approach is motivated by the fuzzy modeling approach and a learning algorithms used for clustering and classification in pattern recognition. The basics of why and how the approach works are given. Few examples of nonlinear regression and classification are modeled. The relationship between the proposed technique, radial basis neural networks, kernel regression, probabilistic neural networks, and fuzzy modeling is explained. Finally advantages and disadvantages are discussed.

  16. Burnout-depression overlap: a review.

    PubMed

    Bianchi, Renzo; Schonfeld, Irvin Sam; Laurent, Eric

    2015-03-01

    Whether burnout is a form of depression or a distinct phenomenon is an object of controversy. The aim of the present article was to provide an up-to-date review of the literature dedicated to the question of burnout-depression overlap. A systematic literature search was carried out in PubMed, PsycINFO, and IngentaConnect. A total of 92 studies were identified as informing the issue of burnout-depression overlap. The current state of the art suggests that the distinction between burnout and depression is conceptually fragile. It is notably unclear how the state of burnout (i.e., the end stage of the burnout process) is conceived to differ from clinical depression. Empirically, evidence for the distinctiveness of the burnout phenomenon has been inconsistent, with the most recent studies casting doubt on that distinctiveness. The absence of consensual diagnostic criteria for burnout and burnout research's insufficient consideration of the heterogeneity of depressive disorders constitute major obstacles to the resolution of the raised issue. In conclusion, the epistemic status of the seminal, field-dominating definition of burnout is questioned. It is suggested that systematic clinical observation should be given a central place in future research on burnout-depression overlap. PMID:25638755

  17. Development of Pulse Position Modulation/Optical CDMA (PPM/O-CDMA) for Gb/s Fiber Optic Networking

    SciTech Connect

    Mendez, A J; Hernandez, V J; Gagliardi, R M; Bennett, C V; Lennon, W J

    2006-05-25

    Pulse position modulation (PPM) in lasercom systems is known to provide potential advantages over other modulation schemes. [1]. In PPM, a periodic time frame is established and data is transmitted by placing a pulse in any one of several subintervals (or ''slots'') within each frame. In PPM/O-CDMA all users use the same frame structure and each transmits its unique address code in place of the PPM pulse. The advantage of PPM as a pulsed signal format is that (1) a single pulse can transmit multiple bits during each frame; (2) decoding (determining which subinterval contains the pulse) is by comparison rather than threshold tests (as in on-off-keying); (3) each user transmits in only a small fraction of the frame, hence the multi-access interference (MAI) of any user statistically spreads over the entire frame time, reducing the chance of overlap with any other user; and (4) under an average power constraint, increasing frame time increases the peak pulse power (i.e., PPM trades average power for peak power). The most straightforward approach to implementing PPM/O-CDMA data modulator inserts the PPM pulse modulation first, then imposes the O-CDMA coding. A pulsed PPM modulator converts bits (words) into pulse positions. In the case of wavelength/time (W/T) matrix codes, multi-wavelength pulses are generated at the beginning of each frame, at the frame rate. For M-ary PPM, a block of k bits represents M = 2{sup k} unique interval positions in the frame corresponding to M-l specific time delays (the zero delay is also a position). PPM modulation is achieved by shifting the initial pulse into an interval position with delay D(i) (i=0,1,2,..,M-1). The location of a pulse position (selection of a delay) therefore identifies a unique k-bit word in the frame. At the receiver, determining which delay occurs relative to the frame start time decodes the data word. The probability of pulse overlap between two users decreases with M, which therefore decreases the probability

  18. Non-constant ponderomotive energy in above threshold ionization by intense few-cycle laser pulses

    NASA Astrophysics Data System (ADS)

    Della Picca, Renata; Gramajo, Ana A.; Arbó, Diego G.; López, Sebastián D.; Garibotti, Carlos R.

    2015-09-01

    We analyze the contribution of the quiver kinetic energy acquired by an electron in an oscillating electric field to the energy balance in atomic ionization processes by a short laser pulse. Due to the time dependence of this additional kinetic energy, a temporal average is assumed to maintain a stationary energy conservation rule. This rule is used to predict the position of the peaks observed in the photo electron spectra (PE). For a flat top pulse envelope, the mean value of the quiver energy over the whole pulse leads to the concept of ponderomotive energy $U_{p}$. However for a short pulse with a fast changing field intensity a stationarity approximation could not be precise. We check these concepts by studying first the photoelectron (PE) spectrum within the Semiclassical Model (SCM) for a multiple steps pulses. The SCM offers the possibility to establish a connection between emission times and the PE spectrum in the energy domain. We show that PE substructures stem from ionization at different times mapping the pulse envelope. We also present the analysis of the PE spectrum for a realistic sine-squared envelope within the Coulomb-Volkov and \\textit{ab initio} calculations solving the time-dependent Schr\\"odinger equation. We found that the electron emission amplitudes produced at different times interfere with each other and produce a new additional pattern, that overlap the above-threshold ionization (ATI) peaks.

  19. Efficient discovery of overlapping communities in massive networks.

    PubMed

    Gopalan, Prem K; Blei, David M

    2013-09-01

    Detecting overlapping communities is essential to analyzing and exploring natural networks such as social networks, biological networks, and citation networks. However, most existing approaches do not scale to the size of networks that we regularly observe in the real world. In this paper, we develop a scalable approach to community detection that discovers overlapping communities in massive real-world networks. Our approach is based on a Bayesian model of networks that allows nodes to participate in multiple communities, and a corresponding algorithm that naturally interleaves subsampling from the network and updating an estimate of its communities. We demonstrate how we can discover the hidden community structure of several real-world networks, including 3.7 million US patents, 575,000 physics articles from the arXiv preprint server, and 875,000 connected Web pages from the Internet. Furthermore, we demonstrate on large simulated networks that our algorithm accurately discovers the true community structure. This paper opens the door to using sophisticated statistical models to analyze massive networks. PMID:23950224

  20. A Case of Overlapping Choriocapillaritis Syndromes: Multimodal Imaging Appraisal

    PubMed Central

    Kuznetcova, Tatiana; Jeannin, Bruno; Herbort, Carl P

    2012-01-01

    Purpose: To present a patient with overlapping choriocapillaritis syndromes who first presented as a typical case of multiple evanescent white dot syndrome (MEWDS) and later with characteristic findings compatible with multifocal choroiditis (MFC). Case Report: A 40-year-old myopic woman presented with a paracentral scotoma OS. Fundus examination revealed pale discolored areas around the optic disc corresponding to faintly hyperfluorescent areas on fluorescein angiography (FA). On indocyanine green angiography (ICGA) there was extensive peripapillary hypofluorescence and confluent hypofluorescent dots superiorly. According to the clinical picture, a diagnosis of MEWDS was made. In 4 weeks, the visual field reverted to normal together with almost complete regression of hypofluorescence on ICGA. However, 4 months later fundus examination revealed some scars, a finding not typical for MEWDS. Besides, she developed another scotoma 12 months later accompanied by photopsia and the fundus illustrated more numerous scars than one year earlier. ICGA showed hypofluorescent areas corresponding to the scotoma delineated by visual field testing. The pattern of this recurrence clearly corresponded to MFC. Conclusion: This case illustrates an overlap between two entities, MEWDS and MFC in two sequential episodes. FA and fundus autofluorescence accounted for the lesions and optical coherence tomography showed damage to the photoreceptor outer segments, but only ICGA correlated well with functional evolution. PMID:22737390

  1. Efficient discovery of overlapping communities in massive networks

    PubMed Central

    Gopalan, Prem K.; Blei, David M.

    2013-01-01

    Detecting overlapping communities is essential to analyzing and exploring natural networks such as social networks, biological networks, and citation networks. However, most existing approaches do not scale to the size of networks that we regularly observe in the real world. In this paper, we develop a scalable approach to community detection that discovers overlapping communities in massive real-world networks. Our approach is based on a Bayesian model of networks that allows nodes to participate in multiple communities, and a corresponding algorithm that naturally interleaves subsampling from the network and updating an estimate of its communities. We demonstrate how we can discover the hidden community structure of several real-world networks, including 3.7 million US patents, 575,000 physics articles from the arXiv preprint server, and 875,000 connected Web pages from the Internet. Furthermore, we demonstrate on large simulated networks that our algorithm accurately discovers the true community structure. This paper opens the door to using sophisticated statistical models to analyze massive networks. PMID:23950224

  2. PARALYZER FOR PULSE HEIGHT DISTRIBUTION ANALYZER

    DOEpatents

    Fairstein, E.

    1960-01-19

    A paralyzer circuit is described for use with a pulseheight distribution analyzer to prevent the analyzer from counting overlapping pulses where they would serve to provide a false indication. The paralyzer circuit comprises a pair of cathode-coupled amplifiers for amplifying pulses of opposite polarity. Diodes are provided having their anodes coupled to the separate outputs of the amplifiers to produce only positive signals, and a trigger circuit is coupled to the diodes ior operation by input pulses of either polarity from the amplifiers. A delay network couples the output of the trigger circuit for delaying the pulses.

  3. Pulse Oximetry

    MedlinePlus

    ... www.thoracic.org amount of gases (oxygen and carbon dioxide) that are in your blood. To get an ... Also, a pulse oximeter does not measure your carbon dioxide level. How accurate is the pulse oximeter? The ...

  4. Influence of slice overlap on positron emission tomography image quality

    NASA Astrophysics Data System (ADS)

    McKeown, Clare; Gillen, Gerry; Dempsey, Mary Frances; Findlay, Caroline

    2016-02-01

    PET scans use overlapping acquisition beds to correct for reduced sensitivity at bed edges. The optimum overlap size for the General Electric (GE) Discovery 690 has not been established. This study assesses how image quality is affected by slice overlap. Efficacy of 23% overlaps (recommended by GE) and 49% overlaps (maximum possible overlap) were specifically assessed. European Association of Nuclear Medicine (EANM) guidelines for calculating minimum injected activities based on overlap size were also reviewed. A uniform flood phantom was used to assess noise (coefficient of variation, (COV)) and voxel accuracy (activity concentrations, Bq ml-1). A NEMA (National Electrical Manufacturers Association) body phantom with hot/cold spheres in a background activity was used to assess contrast recovery coefficients (CRCs) and signal to noise ratios (SNR). Different overlap sizes and sphere-to-background ratios were assessed. COVs for 49% and 23% overlaps were 9% and 13% respectively. This increased noise was difficult to visualise on the 23% overlap images. Mean voxel activity concentrations were not affected by overlap size. No clinically significant differences in CRCs were observed. However, visibility and SNR of small, low contrast spheres (⩽13 mm diameter, 2:1 sphere to background ratio) may be affected by overlap size in low count studies if they are located in the overlap area. There was minimal detectable influence on image quality in terms of noise, mean activity concentrations or mean CRCs when comparing 23% overlap with 49% overlap. Detectability of small, low contrast lesions may be affected in low count studies—however, this is a worst-case scenario. The marginal benefits of increasing overlap from 23% to 49% are likely to be offset by increased patient scan times. A 23% overlap is therefore appropriate for clinical use. An amendment to EANM guidelines for calculating injected activities is also proposed which better reflects the effect overlap size has

  5. Hysteresis as a Marker for Complex, Overlapping Landscapes in Proteins

    PubMed Central

    Andrews, Benjamin T.; Capraro, Dominique T.; Sulkowska, Joanna I.; Onuchic, José N.; Jennings, Patricia A.

    2013-01-01

    Topologically complex proteins fold by multiple routes as a result of hard-to-fold regions of the proteins. Oftentimes these regions are introduced into the protein scaffold for function and increase frustration in the otherwise smooth-funneled landscape. Interestingly, while functional regions add complexity to folding landscapes, they may also contribute to a unique behavior referred to as hysteresis. While hysteresis is predicted to be rare, it is observed in various proteins, including proteins containing a unique peptide cyclization to form a fluorescent chromophore as well as proteins containing a knotted topology in their native fold. Here, hysteresis is demonstrated to be a consequence of the decoupling of unfolding events from the isomerization or hula-twist of a chromophore in one protein and the untying of the knot in a second protein system. The question now is- can hysteresis be a marker for the interplay of landscapes where complex folding and functional regions overlap? PMID:23525263

  6. Voriconazole-induced periostitis in a patient with overlap syndromes.

    PubMed

    Hirota, Keisho; Yasoda, Akihiro; Fujii, Toshihito; Inagaki, Nobuya

    2014-01-01

    A 52-year-old woman with overlap syndrome and interstitial pneumonia underwent immunosuppressive therapy and she was suspected to suffer from pulmonary aspergillosis. Oral voriconazole was initiated, and a rapid elevation of alkaline phosphatase (ALP) occurred after 4 weeks. After 2 months, the patient presented diffuse pain in bilateral skeletal regions, and bone scintigraphy revealed bilateral multiple areas of increased radiotracer uptake. We suspected the skeletal involvement as voriconazole-induced periostitis. Actually, the plasma fluoride level was increased. Voriconazole was replaced with itraconazole, and after 3 weeks, the patient stopped complaining of bone pain concomitant with the decrease in ALP. Voriconazole-induced periostitis is a rare condition but had previously been reported in solid organ or patients with bone marrow transplant who received a long-term voriconazole therapy. Our present case is distinctive of previous ones, because it occurred in a patient with connective tissue disease which had its rapid progression. PMID:24599432

  7. Overlap populations, bond orders and valences for 'fuzzy' atoms

    NASA Astrophysics Data System (ADS)

    Mayer, I.; Salvador, P.

    2004-01-01

    Proper definitions are proposed to calculate interatomic overlap populations, bond order (multiplicity) indices and actual atomic valences from the results of ab initio quantum chemical calculations, in terms of 'fuzzy' atoms, i.e., such divisions of the three-dimensional physical space into atomic regions in which the regions assigned to the individual atoms have no sharp boundaries but exhibit a continuous transition from one to another. The results of test calculations are in agreement with the classical chemical notions, exhibit unexpectedly small basis sensitivity and do not depend too much on the selection of the weight function defining the actual division of the space into 'fuzzy' atomic regions. The scheme is applicable on both SCF and correlated levels of theory. A free program is available.

  8. Communications overlapping in fast multipole particle dynamics methods

    SciTech Connect

    Kurzak, Jakub; Pettitt, B. Montgomery . E-mail: pettitt@uh.edu

    2005-03-01

    In molecular dynamics the fast multipole method (FMM) is an attractive alternative to Ewald summation for calculating electrostatic interactions due to the operation counts. However when applied to small particle systems and taken to many processors it has a high demand for interprocessor communication. In a distributed memory environment this demand severely limits applicability of the FMM to systems with O(10 K atoms). We present an algorithm that allows for fine grained overlap of communication and computation, while not sacrificing synchronization and determinism in the equations of motion. The method avoids contention in the communication subsystem making it feasible to use the FMM for smaller systems on larger numbers of processors. Our algorithm also facilitates application of multiple time stepping techniques within the FMM. We present scaling at a reasonably high level of accuracy compared with optimized Ewald methods.

  9. Cenozoic Motion of Greenland - Overlaps and Seaways

    NASA Astrophysics Data System (ADS)

    Lawver, L. A.; Norton, I. O.; Gahagan, L.

    2014-12-01

    Using the seafloor magnetic anomalies found in the Labrador Sea, North Atlantic and Eurasian basin to constrain the Cenozoic motion of Greenland, we have produced a new model for the tectonic evolution of the region. The aeromagnetic data collected by the Naval Research Lab [Brozena et al., 2003] in the Eurasian Basin and Canadian data from the Labrador Sea have been re-evaluated using new gridding algorithms and profile modeling using ModMag (Mendel et al., 2005). As a consequence, we have changed the published correlations, mostly prior to Chron C6 [19.05 Ma]. Presently published seafloor magnetic anomalies from the Labrador Sea assume that seafloor spreading ceased at C13 [33.06 Ma] but such an assumption produces an unacceptable overlap of Kronprins Christian Land of northeast Greenland with Svalbard, up to 140 km of overlap in some models. Our new model does not need any "unacceptable" overlap but does produce a slight amount of Eocene compression on Svalbard as is found on land there. Our model allows for an Early Eocene seaway between Ellesmere Island and northwest Greenland that may have connected the Labrador Sea through Baffin Bay and ultimately to the nascent Eurasian Basin, although its depth or even its essential existence is unknowable. During the Miocene, there is no room for a deepwater seaway in Fram Strait until at least the very end of the Early Miocene and perhaps not until Middle Miocene. Brozena, J. and six others, 2003. New aerogeophysical study of the Eurasia Basin and Lomonosov Ridge: Implications for basin development. Geology 31, 825-828. Mendel, V., M. Munschy and D.Sauter, 2005, MODMAG, a MATLAB program to model marine magnetic anomalies, Comp. Geosci., 31, .589-597

  10. Shaft drill bit with overlapping cutter arrangement

    SciTech Connect

    Cunningham, R.A.; Pessier, R.C.

    1981-02-03

    An earth boring drill bit for large diameter shafts has an improved cutter arrangement. The drill bit has a cutter support member with a number of cutters mounted to it for disintegrating the earth formation face. At least one inner cutter is mounted near the center for cutting the center area. A number of gage cutters are mounted at the periphery to cut the gage area of the shaft. A number of intermediate cutters are spaced between the inner and gage cutters. Each intermediate cutter overlaps onehalf of its width with an adjacent intermediate cutter.

  11. Technology initiatives with government/business overlap

    NASA Astrophysics Data System (ADS)

    Knapp, Robert H., Jr.

    2015-03-01

    Three important present-day technology development settings involve significant overlap between government and private sectors. The Advanced Research Project Agency for Energy (ARPA-E) supports a wide range of "high risk, high return" projects carried out in academic, non-profit or private business settings. The Materials Genome Initiative (MGI), based in the White House, aims at radical acceleration of the development process for advanced materials. California public utilities such as Pacific Gas & Electric operate under a structure of financial returns and political program mandates that make them arms of public policy as much as independent businesses.

  12. Patellar Articular Overlap on MRI Is a Simple Alternative to Conventional Measurements of Patellar Height

    PubMed Central

    Munch, Jacqueline L.; Sullivan, Jaron P.; Nguyen, Joseph T.; Mintz, Douglas; Green, Daniel W.; Shubin Stein, Beth E.; Strickland, Sabrina

    2016-01-01

    Background: Patella alta describes an abnormally high-riding patella in relationship to the femur and has been shown to correlate with patellofemoral pain, instability, chondromalacia, and arthrosis. Conventional measurements of patella alta involve multiple measurements and are often not defined on cross-sectional imaging as related to radiographs. Hypothesis: Patellar articular overlap on sagittal magnetic resonance imaging (MRI) will correlate well with conventional measurements of patella alta as measured by a standardized technique defined by our group. Study Design: Cohort study (diagnosis); Level of evidence, 2. Methods: MRIs of 239 knees were reviewed by 3 attending surgeons with practices focusing on patellofemoral disease, as well as 2 sports medicine fellows and 1 musculoskeletal radiologist. Measurements included articular overlap, percentage of articular coverage, Caton-Deschamps index, Blackburne-Peel index, and modified Insall-Salvati index. Results: Interrater reliability was high for Caton-Deschamps, Blackburne-Peel, and modified Insall-Salvati indices (intraclass correlation coefficient [ICC], 0.877, 0.828, and 0.787, respectively). Articular overlap and percentage articular coverage correlated well with each other (ICC, 0.961; P < .001) and with the Caton-Deschamps (overlap r = –0.271, P < .001; coverage r = –0.131, P = .037) and Blackburne-Peel (overlap r = 0.343, P < .001; coverage r = –0.238, P < .001) indices. Articular overlap and percentage coverage failed to correlate with the modified Insall-Salvati index (overlap r = –0.117, P = .091; coverage r = 0.007, P = .918). Conclusion: Patellar articular overlap and percentage of patellar articular coverage show promise as a simpler alternative to conventional, ratio-based measurements of patellar height. Future studies are needed to evaluate the range of normal and the relationship to our traditionally used measurements. PMID:27482530

  13. Lectures on pulsed NMR

    SciTech Connect

    Pines, A.

    1988-08-01

    These lectures discuss some recent developments in pulsed NMR, emphasizing fundamental principles with selected illustrative applications. Major topics covered include multiple-quantum spectroscopy, spin decoupling, the interaction of spins with a quantized field, adiabatic rapid passage, spin temperature and statistics of cross-polarization, coherent averaging, and zero field NMR. 32 refs., 56 figs.

  14. Lectures on pulsed NMR

    SciTech Connect

    Pines, A.

    1986-09-01

    These lectures discuss some recent developments in pulsed NMR, emphasizing fundamental principles with selected illustrative applications. Major topics covered include multiple-quantum spectroscopy, spin decoupling, the interaction of spins with a quantized field, adiabatic rapid passage, spin temperature and statistics of cross-polarization, coherent averaging, and zero field NMR. 55 figs.

  15. Performance of Bare and Sol-Gel Coated DKDP Crystal Surfaces Exposed to Multiple 351-nm Laser Pulses in Vacuum and Air

    SciTech Connect

    Whitman, P K; Norton, M; Nostrand, M; Molander, W; Nelson, A; Engelhard, M; Gasper, D; Baer, D; Siekhaus, W; Auerbach, J; Demos, S; Staggs, M; Burnham, A

    2001-12-19

    We have investigated the surface degradation of bare and sol-gel coated deuterated potassium dihydrogen phosphate (DKDP) crystals when exposed to 351-nm laser pulses in atmospheric air and nitrogen and at pressures ranging from atmospheric down to 10{sup -5} Torr vacuum. Optical microscopy, surface topography, surface chemical analyses, 351-nm pumped photoemission maps, and photometry results have been used to characterize these samples. We report the occurrence of two potentially linked surface degradation phenomena: the development of increased photoemission and the development of unacceptable surface roughening in the region exposed to the beam in vacuum. We note no degradation for surfaces exposed in air or nitrogen at pressures exceeding 1 torr. Diamond-turned DKDP surfaces show a ubiquitous, low-intensity photoemission signature before exposure to any laser fluence. The observed reduction of this emission signal as a function of operating pressure and accumulated laser energy when crystals are exposed to 351-nm laser pulses in air can be correlated with the removal of surface carbon.

  16. PULSE GENERATOR

    DOEpatents

    Roeschke, C.W.

    1957-09-24

    An improvement in pulse generators is described by which there are produced pulses of a duration from about 1 to 10 microseconds with a truly flat top and extremely rapid rise and fall. The pulses are produced by triggering from a separate input or by modifying the current to operate as a free-running pulse generator. In its broad aspect, the disclosed pulse generator comprises a first tube with an anode capacitor and grid circuit which controls the firing; a second tube series connected in the cathode circuit of the first tube such that discharge of the first tube places a voltage across it as the leading edge of the desired pulse; and an integrator circuit from the plate across the grid of the second tube to control the discharge time of the second tube, determining the pulse length.

  17. Improvement of overlapping nuclear track densitometry.

    PubMed

    Ghergherehchi, M; Kim, S Y; Afarideh, H; Kim, Y S; Chai, J S

    2015-03-01

    Detection of tracks produced by α particles, protons or nuclear fission fragments in plastic detectors, viz., solid-state nuclear track detectors, constitutes a very important tool in various areas. It is not easy for humans to count CR-39 nuclear tracks manually, especially when the track density is very high. An automated computer program called KTTMS2, written in C++ and running with a user friendly interface, has been developed for recognition and parametric measurements of etched tracks in images captured from the surface of solid-state nuclear track detectors. Well-known edge detection methods were applied to estimate the precision and accuracy of nuclear track densitometry using the CR-39 detector. Among the various routine edge detection methods, the Canny method was chosen because it was the most accurate technique. Because accuracy becomes more important as the track density increases, this allows more overlapping tracks to be detected. KTTMS2 (the proposed system) has an efficiency of 95% and can identify the noise as a background track (5%). Experimental results showed that the error percentage was reduced from 7.63% to 3.23% for high-density tracks when the count was adjusted by the estimated overlapping tracks. PMID:25581623

  18. Serial FBG sensor network allowing overlapping spectra

    NASA Astrophysics Data System (ADS)

    Abbenseth, S.; Lochmann, S.; Ahrens, A.; Rehm, B.

    2016-05-01

    For structure or material monitoring low impact serial fiber Bragg grating (FBG) networks have attracted increasing research interest. Common sensor networks using wavelength division multiplexing (WDM) for FBG interrogation are limited in their efficiency by the spectral width of their light source, the FBG tuning range and the spectral guard bands. Overlapping spectra are strictly forbidden in this case. Applying time division multiplexing (TDM) or active resonator schemes may overcome these restrictions. However, they introduce other substantial disadvantages like signal roundtrip dependency or sophisticated control of active resonating structures. Code division multiplexing (CDM) as a means of FBG interrogation by simple autocorrelation of appropriate codes has been shown to be superior in this respect. However, it came at the cost of a second spectrometer introducing additional equalization efforts. We demonstrate a new serial FBG sensor network utilizing CDM signal processing for efficient sensor interrogation without the need of a second spectrometer and additional state of polarization (SOP) controlling components. It allows overlapping spectra even when all sensing FBGs are positioned at the same centre wavelength and it shows a high degree of insensitivity to SOP. Sequence inversed keyed (SIK) serial signal processing utilizing quasi-orthogonal balanced codes ensures simple and quick sensor interrogation with high signal-to-interference/noise ratio.

  19. Phonological and Orthographic Overlap Effects in Fast and Masked Priming

    PubMed Central

    Frisson, Steven; Bélanger, Nathalie N.; Rayner, Keith

    2014-01-01

    We investigated how orthographic and phonological information is activated during reading, using a fast priming task, and during single word recognition, using masked priming. Specifically, different types of overlap between prime and target were contrasted: high orthographic and high phonological overlap (track-crack), high orthographic and low phonological overlap (bear-gear), or low orthographic and high phonological overlap (fruit-chute). In addition, we examined whether (orthographic) beginning overlap (swoop-swoon) yielded the same priming pattern as end (rhyme) overlap (track-crack). Prime durations were 32 and 50ms in the fast priming version, and 50ms in the masked priming version, and mode of presentation (prime and target in lower case) was identical. The fast priming experiment showed facilitatory priming effects when both orthography and phonology overlapped, with no apparent differences between beginning and end overlap pairs. Facilitation was also found when prime and target only overlapped orthographically. In contrast, the masked priming experiment showed inhibition for both types of end overlap pairs (with and without phonological overlap), and no difference for begin overlap items. When prime and target only shared principally phonological information, facilitation was only found with a long prime duration in the fast priming experiment, while no differences were found in the masked priming version. These contrasting results suggest that fast priming and masked priming do not necessarily tap into the same type of processing. PMID:24365065

  20. Phonological and orthographic overlap effects in fast and masked priming.

    PubMed

    Frisson, Steven; Bélanger, Nathalie N; Rayner, Keith

    2014-01-01

    We investigated how orthographic and phonological information is activated during reading, using a fast priming task, and during single-word recognition, using masked priming. Specifically, different types of overlap between prime and target were contrasted: high orthographic and high phonological overlap (track-crack), high orthographic and low phonological overlap (bear-gear), or low orthographic and high phonological overlap (fruit-chute). In addition, we examined whether (orthographic) beginning overlap (swoop-swoon) yielded the same priming pattern as end (rhyme) overlap (track-crack). Prime durations were 32 and 50 ms in the fast priming version and 50 ms in the masked priming version, and mode of presentation (prime and target in lower case) was identical. The fast priming experiment showed facilitatory priming effects when both orthography and phonology overlapped, with no apparent differences between beginning and end overlap pairs. Facilitation was also found when prime and target only overlapped orthographically. In contrast, the masked priming experiment showed inhibition for both types of end overlap pairs (with and without phonological overlap) and no difference for begin overlap items. When prime and target only shared principally phonological information, facilitation was only found with a long prime duration in the fast priming experiment, while no differences were found in the masked priming version. These contrasting results suggest that fast priming and masked priming do not necessarily tap into the same type of processing. PMID:24365065

  1. SU-E-T-181: Feasibility and Robustness of Using Overlapping VMAT Arcs for Conformal Irradiation of Large Irregular PTVs

    SciTech Connect

    Liu, H; Kim, J; Chen, Z

    2014-06-01

    Purpose: To investigate the feasibility and robustness of using multiple overlapping arcs for delivering volumetric modulated arc therapy (VMAT) to irregular PTVs with large superior-inferior (SI) dimensions. Methods: A patient with stage IV alveolar rhabdomyosarcoma, with a combined PTV length of 56 cm in SI direction, was planned and treated in our department using two VMAT arcs overlapped along the SI direction to take advantage of the much needed dose sculpting capabilities of VMAT. The overlapping VMATs, each consisted of two arcs, were optimized simultaneously using Varian Eclipse system. The susceptibility of the resulting plan to uncertainties associated the set up of two separate isocenters during treatment was investigated by comparing the dose distributions resulted from small shifts introduced into the isocenter position. The robustness of this technique was further assessed for plans generated using different amount of overlap between the overlapping arcs. Results: When the plan was generated with 6 cm overlap between adjacent arcs, maximum dose variations observed near overlapping edges was up to 9.2%, 10%, and 26.7% for setup uncertainties of 2 mm, 3 mm, and 5 mm, respectively. By increasing the junction overlap to 16 cm, maximum dose variations was reduced to 4.2%, 6.5%, and 10.2% for setup uncertainties of 2 mm, 3 mm, and 5 mm, respectively. In general, dose variation was found to increase dramatically with increasing magnitude of setup uncertainty. The technique can be made more robust against setup uncertainty by using large overlap between adjacent VMAT arcs. Conclusion: Overlapping VMAT arcs can be used effectively for conformal irradiation of PTVs with large SI dimension. The dosimetric impact of uncertainties in required isocenter shifts can be minimized by planning with large overlap between adjacent arcs and by keeping setup uncertainty ≤ 2mm.

  2. A Review of Journal Coverage Overlap with an Extension to the Definition of Overlap.

    ERIC Educational Resources Information Center

    Gluck, Myke

    1990-01-01

    Examines the definition of journal coverage overlap in abstracting and indexing services during the past 30 years of research and expands the definition using a matrix of dissimilarity values. Multidimensional scaling analysis is applied to graphically demonstrate this definition and a naive secondary tool selection algorithm is presented. (43…

  3. Parkinsonism and frontotemporal dementia: the clinical overlap.

    PubMed

    Espay, Alberto J; Litvan, Irene

    2011-11-01

    Frontotemporal dementia is commonly associated with parkinsonism in several sporadic (i.e., progressive supranuclear palsy, corticobasal degeneration) and familial neurodegenerative disorders (i.e., frontotemporal dementia associated with parkinsonism and MAPT or progranulin mutations in chromosome 17). The clinical diagnosis of these disorders may be challenging in view of overlapping clinical features, particularly in speech, language, and behavior. The motor and cognitive phenotypes can be viewed within a spectrum of clinical, pathologic, and genetic disorders with no discrete clinicopathologic correlations but rather lying within a dementia-parkinsonism continuum. Neuroimaging and cerebrospinal fluid analysis can be helpful, but the poor specificity of clinical and imaging features has enormously challenged the development of biological markers that could differentiate these disorders premortem. This gap is critical to bridge in order to allow testing of novel biological therapies that may slow the progression of these proteinopathies. PMID:21892619

  4. Pulse stretcher

    DOEpatents

    Horton, J.A.

    1994-05-03

    Apparatus for increasing the length of a laser pulse to reduce its peak power without substantial loss in the average power of the pulse is disclosed. The apparatus uses a White cell having a plurality of optical delay paths of successively increasing number of passes between the field mirror and the objective mirrors. A pulse from a laser travels through a multi-leg reflective path between a beam splitter and a totally reflective mirror to the laser output. The laser pulse is also simultaneously injected through the beam splitter to the input mirrors of the optical delay paths. The pulses from the output mirrors of the optical delay paths go simultaneously to the laser output and to the input mirrors of the longer optical delay paths. The beam splitter is 50% reflective and 50% transmissive to provide equal attenuation of all of the pulses at the laser output. 6 figures.

  5. In vivo single-shot three-dimensionally localized multiple quantum spectroscopy of GABA in the human brain with improved spectral selectivity

    NASA Astrophysics Data System (ADS)

    Choi, In-Young; Lee, Sang-Pil; Shen, Jun

    2005-01-01

    A single-shot multiple quantum filtering method is developed that uses two double-band frequency selective pulses for enhanced spectral selectivity in combination with a slice-selective 90°, a slice-selective universal rotator 90°, and a spectral-spatial pulse composed of two slice-selective universal rotator 45° pulses for single-shot three-dimensional localization. The use of this selective multiple quantum filtering method for C3 and C4 methylene protons of GABA resulted in improved spectral selectivity for GABA and effective suppression of overlapping signals such as creatine and glutathione in each single scan, providing reliable measurements of the GABA doublet in all subjects. The concentration of GABA was measured to be 0.7 ± 0.2 μmol/g (means ± SD, n = 15) in the fronto-parietal region of the human brain in vivo.

  6. Pulsed power

    NASA Astrophysics Data System (ADS)

    Stone, David H.

    Pulsed power systems are critical elements for such prospective weapons technologies as high-power microwaves, electrothermal and electromagnetic projectile launchers, neutral particle beams, space-based FELs, ground-based lasers, and charged particle beams. Pulsed power will also be essential for the development of nonweapon military systems such as lidars and ultrawideband radars, and could serve as the bases for nuclear weapon effect simulators. The pulsed power generation requirements for each of these systems is considered.

  7. Geometrical constraint experimental determination of Raman lidar overlap profile.

    PubMed

    Li, Jian; Li, Chengcai; Zhao, Yiming; Li, Jing; Chu, Yiqi

    2016-06-20

    A simple experimental method to determine the overlap profile of Raman lidar is presented in this paper. Based on Mie and Raman backscattering signals and a geometrically constrained condition, the overlap profile of a Raman lidar system can be determined. Our approach simultaneously retrieves the lidar ratio of aerosols, which is one of the most important sources of uncertainty in the overlap profile determination. The results indicate that the overlap factor is significantly influenced by the lidar ratio in experimental methods. A representative case study indicates that the correction of the overlap profile obtained by this method is practical and feasible. PMID:27409119

  8. Pulse Voltammetry

    NASA Astrophysics Data System (ADS)

    Stojek, Zbigniew

    The idea of imposing potential pulses and measuring the currents at the end of each pulse was proposed by Barker in a little-known journal as early as in 1958 [1]. However, the first reliable trouble-free and affordable polarographs offering voltammetric pulse techniques appeared on the market only in the 1970s. This delay was due to some limitations on the electronic side. In the 1990s, again substantial progress in electrochemical pulse instrumentation took place. This was related to the introduction of microprocessors, computers, and advanced software.

  9. Multiple pulse-heating experiments with different current to determine total emissivity, heat capacity, and electrical resistivity of electrically conductive materials at high temperatures.

    PubMed

    Watanabe, Hiromichi; Yamashita, Yuichiro

    2012-01-01

    A modified pulse-heating method is proposed to improve the accuracy of measurement of the hemispherical total emissivity, specific heat capacity, and electrical resistivity of electrically conductive materials at high temperatures. The proposed method is based on the analysis of a series of rapid resistive self-heating experiments on a sample heated at different temperature rates. The method is used to measure the three properties of the IG-110 grade of isotropic graphite at temperatures from 850 to 1800 K. The problem of the extrinsic heating-rate effect, which reduces the accuracy of the measurements, is successfully mitigated by compensating for the generally neglected experimental error associated with the electrical measurands (current and voltage). The results obtained by the proposed method can be validated by the linearity of measured quantities used in the property determinations. The results are in reasonably good agreement with previously published data, which demonstrate the suitability of the proposed method, in particular, to the resistivity and total emissivity measurements. An interesting result is the existence of a minimum in the emissivity of the isotropic graphite at around 1120 K, consistent with the electrical resistivity results. PMID:22299976

  10. Measurements of multiple gas parameters in a pulsed-detonation combustor using time-division-multiplexed Fourier-domain mode-locked lasers.

    PubMed

    Caswell, Andrew W; Roy, Sukesh; An, Xinliang; Sanders, Scott T; Schauer, Frederick R; Gord, James R

    2013-04-20

    Hyperspectral absorption spectroscopy is being used to monitor gas temperature, velocity, pressure, and H(2)O mole fraction in a research-grade pulsed-detonation combustor (PDC) at the Air Force Research Laboratory. The hyperspectral source employed is termed the TDM 3-FDML because it consists of three time-division-multiplexed (TDM) Fourier-domain mode-locked (FDML) lasers. This optical-fiber-based source monitors sufficient spectral information in the H(2)O absorption spectrum near 1350 nm to permit measurements over the wide range of conditions encountered throughout the PDC cycle. Doppler velocimetry based on absorption features is accomplished using a counterpropagating beam approach that is designed to minimize common-mode flow noise. The PDC in this study is operated in two configurations: one in which the combustion tube exhausts directly to the ambient environment and another in which it feeds an automotive-style turbocharger to assess the performance of a detonation-driven turbine. Because the enthalpy flow [kilojoule/second] is important in assessing the performance of the PDC in various configurations, it is calculated from the measured gas properties. PMID:23669701

  11. Overlapping communities reveal rich structure in large-scale brain networks during rest and task conditions.

    PubMed

    Najafi, Mahshid; McMenamin, Brenton W; Simon, Jonathan Z; Pessoa, Luiz

    2016-07-15

    Large-scale analysis of functional MRI data has revealed that brain regions can be grouped into stable "networks" or communities. In many instances, the communities are characterized as relatively disjoint. Although recent work indicates that brain regions may participate in multiple communities (for example, hub regions), the extent of community overlap is poorly understood. To address these issues, here we investigated large-scale brain networks based on "rest" and task human functional MRI data by employing a mixed-membership Bayesian model that allows each brain region to belong to all communities simultaneously with varying membership strengths. The approach allowed us to 1) compare the structure of disjoint and overlapping communities; 2) determine the relationship between functional diversity (how diverse is a region's functional activation repertoire) and membership diversity (how diverse is a region's affiliation to communities); 3) characterize overlapping community structure; 4) characterize the degree of non-modularity in brain networks; 5) study the distribution of "bridges", including bottleneck and hub bridges. Our findings revealed the existence of dense community overlap that was not limited to "special" hubs. Furthermore, the findings revealed important differences between community organization during rest and during specific task states. Overall, we suggest that dense overlapping communities are well suited to capture the flexible and task dependent mapping between brain regions and their functions. PMID:27129758

  12. High-speed pulse-shape generator, pulse multiplexer

    DOEpatents

    Burkhart, Scott C.

    2002-01-01

    The invention combines arbitrary amplitude high-speed pulses for precision pulse shaping for the National Ignition Facility (NIF). The circuitry combines arbitrary height pulses which are generated by replicating scaled versions of a trigger pulse and summing them delayed in time on a pulse line. The combined electrical pulses are connected to an electro-optic modulator which modulates a laser beam. The circuit can also be adapted to combine multiple channels of high speed data into a single train of electrical pulses which generates the optical pulses for very high speed optical communication. The invention has application in laser pulse shaping for inertial confinement fusion, in optical data links for computers, telecommunications, and in laser pulse shaping for atomic excitation studies. The invention can be used to effect at least a 10.times. increase in all fiber communication lines. It allows a greatly increased data transfer rate between high-performance computers. The invention is inexpensive enough to bring high-speed video and data services to homes through a super modem.

  13. Pulse transmission receiver with higher-order time derivative pulse correlator

    DOEpatents

    Dress, Jr., William B.; Smith, Stephen F.

    2003-09-16

    Systems and methods for pulse-transmission low-power communication modes are disclosed. A pulse transmission receiver includes: a higher-order time derivative pulse correlator; a demodulation decoder coupled to the higher-order time derivative pulse correlator; a clock coupled to the demodulation decoder; and a pseudorandom polynomial generator coupled to both the higher-order time derivative pulse correlator and the clock. The systems and methods significantly reduce lower-frequency emissions from pulse transmission spread-spectrum communication modes, which reduces potentially harmful interference to existing radio frequency services and users and also simultaneously permit transmission of multiple data bits by utilizing specific pulse shapes.

  14. Depression-Burnout Overlap in Physicians

    PubMed Central

    Wurm, Walter; Vogel, Katrin; Holl, Anna; Ebner, Christoph; Bayer, Dietmar; Mörkl, Sabrina; Szilagyi, Istvan-Szilard; Hotter, Erich; Kapfhammer, Hans-Peter; Hofmann, Peter

    2016-01-01

    Background Whether burnout is a distinct phenomenon rather than a type of depression and whether it is a syndrome, limited to three “core” components (emotional exhaustion, depersonalization and low personal accomplishment) are subjects of current debate. We investigated the depression-burnout overlap, and the pertinence of these three components in a large, representative sample of physicians. Methods In a cross-sectional study, all Austrian physicians were invited to answer a questionnaire that included the Major Depression Inventory (MDI), the Hamburg Burnout Inventory (HBI), as well as demographic and job-related parameters. Of the 40093 physicians who received an invitation, a total of 6351 (15.8%) participated. The data of 5897 participants were suitable for analysis. Results Of the participants, 10.3% were affected by major depression. Our study results suggest that potentially 50.7% of the participants were affected by symptoms of burnout. Compared to physicians unaffected by burnout, the odds ratio of suffering from major depression was 2.99 (95% CI 2.21–4.06) for physicians with mild, 10.14 (95% CI 7.58–13.59) for physicians with moderate, 46.84 (95% CI 35.25–62.24) for physicians with severe burnout and 92.78 (95% CI 62.96–136.74) for the 3% of participants with the highest HBI_sum (sum score of all ten HBI components). The HBI components Emotional Exhaustion, Personal Accomplishment and Detachment (representing depersonalization) tend to correlate more highly with the main symptoms of major depression (sadness, lack of interest and lack of energy) than with each other. A combination of the HBI components Emotional Exhaustion, Helplessness, Inner Void and Tedium (adj.R2 = 0.92) explained more HBI_sum variance than the three “core” components (adj.R2 = 0.85) of burnout combined. Cronbach’s alpha for Emotional Exhaustion, Helplessness, Inner Void and Tedium combined was 0.90 compared to α = 0.54 for the combination of the three

  15. PULSE AMPLIFIER

    DOEpatents

    Johnstone, C.W.

    1958-06-17

    The improvement of pulse amplifiers used with scintillation detectors is described. The pulse amplifier circuit has the advantage of reducing the harmful effects of overloading cause by large signal inputs. In general the pulse amplifier circuit comprises two amplifier tubes with the input pulses applied to one amplifier grid and coupled to the second amplifier tube through a common cathode load. The output of the second amplifier is coupled from the plate circuit to a cathode follower tube grid and a diode tube in connected from grid to cathode of the cathode follower tube. Degenerative feedback is provided in the second amplifier by coupling a signal from the cathode follower cathode to the second amplifier grid. The circuit proqides moderate gain stability, and overload protection for subsequent pulse circuits.

  16. Stimulated light forces using picosecond laser pulses

    NASA Astrophysics Data System (ADS)

    Bloch, Immanuel; Goepfert, A.; Haubrich, D.; Lison, F.; Schuetze, R.; Wynands, Robert; Meschede, Dieter

    1997-05-01

    Using the stimulated force exerted by counterpropagating picosecond laser pulses from a mode-locked Ti:Sapphire laser we were able to focus a beam of laser-cooled cesium atoms along one dimension to about 57% of its original width in the detection zone. The force profile was measured outside and inside the overlap region of the pulses and found to be in agreement with an earlier theoretical prediction. A brief theoretical account of the interaction of atoms with pulsed laser light based on the optical Bloch equations is given.

  17. EVOG: a database for evolutionary analysis of overlapping genes.

    PubMed

    Kim, Dae-Soo; Cho, Chi-Young; Huh, Jae-Won; Kim, Heui-Soo; Cho, Hwan-Gue

    2009-01-01

    Overlapping genes are defined as a pair of genes whose transcripts are overlapped. Recently, many cases of overlapped genes have been investigated in various eukaryotic organisms; however, their origin and transcriptional control mechanism has not yet been clearly determined. In this study, we implemented evolutionary visualizer for overlapping genes (EVOG), a Web-based DB with a novel visualization interface, to investigate the evolutionary relationship between overlapping genes. Using this technique, we collected and analyzed all overlapping genes in human, chimpanzee, orangutan, marmoset, rhesus, cow, dog, mouse, rat, chicken, Xenopus, zebrafish and Drosophila. This integrated database provides a manually curated database that displays the evolutionary features of overlapping genes. The EVOG DB components included a number of overlapping genes (10074 in human, 10,009 in chimpanzee, 67,039 in orangutan, 51,001 in marmoset, 219 in rhesus, 3627 in cow, 209 in dog, 10,700 in mouse, 7987 in rat, 1439 in chicken, 597 in Xenopus, 2457 in zebrafish and 4115 in Drosophila). The EVOG database is very effective and easy to use for the analysis of the evolutionary process of overlapping genes when comparing different species. Therefore, EVOG could potentially be used as the main tool to investigate the evolution of the human genome in relation to disease by comparing the expression profiles of overlapping genes. EVOG is available at http://neobio.cs.pusan.ac.kr/evog/. PMID:18986995

  18. Effects of overlapping strings in pp collisions

    DOE PAGESBeta

    Bierlich, Christian; Gustafson, Gösta; Lönnblad, Leif; Tarasov, Andrey

    2015-03-26

    In models for hadron collisions based on string hadronization, the strings are usually treated as independent, allowing no interaction between the confined colour fields. In studies of nucleus collisions it has been suggested that strings close in space can fuse to form "colour ropes." Such ropes are expected to give more strange particles and baryons, which also has been suggested as a signal for plasma formation. Overlapping strings can also be expected in pp collisions, where usually no phase transition is expected. In particular at the high LHC energies the expected density of strings is quite high. To investigate possiblemore » effects of rope formation, we present a model in which strings are allowed to combine into higher multiplets, giving rise to increased production of baryons and strangeness, or recombine into singlet structures and vanish. Also a crude model for strings recombining into junction structures is considered, again giving rise to increased baryon production. The models are implemented in the DIPSY MC event generator, using PYTHIA8 for hadronization, and comparison to pp minimum bias data, reveals improvement in the description of identified particle spectra.« less

  19. [Autoimmune hepatitis and overlap syndrome: therapy].

    PubMed

    Löhr, H F

    2002-08-21

    Autoimmune Hepatitis (AIH), primary biliary cirrhosis (PBC) and primary sclerosing cholangitis (PSC) represent acute and chronic inflammatory liver diseases in which immune reactions against host antigens are found to be the major pathological mechanism. Only for AIH there is evidence of an autoimmune etiology and humoral and cellular immune reactions are found directed against various liver cell antigens. By diverse autoantibodies several subgroups of autoimmune hepatitis can be distinguished. A very important disease promoting factor seems to be the genetically determined background for autoimmunity characterized by the HLA haplotype A1, B8 and DR3, respectively DR4. Although the histopathology of AIH shows no pathognomonic features distinguishing this type of hepatitis from virus induced chronic hepatitis there are some distinct characteristic morphological lesions. If untreated the prognosis of AIH is unfavourable but the benefit from immunosuppressive therapy with prednisolone and azathioprin is well established. In the last years there was increasing evidence for an overlap syndrome between AIH and PBC and rarely AIH and PSC. These patients are characterized by PBC characteristic bileduct lesions and oftenly antimitochondrial antibodies (AMA). They also show AIH typical inflammatory hepatic lesions in the periportal areas and portal tracts and oftenly the typical genetical background, the HLA haplotype A1, B8, DR3 or DR4. Most of these patients respond probably to a combination therapy containing prednisolon, azathioprine and ursodesoxycholic acid that leads to the reduction of the inflammatory activity. PMID:12233265

  20. Base drive and overlap protection circuit

    DOEpatents

    Gritter, David J.

    1983-01-01

    An inverter (34) which provides power to an A. C. machine (28) is controlled by a circuit (36) employing PWM control strategy whereby A. C. power is supplied to the machine at a preselectable frequency and preselectable voltage. This is accomplished by the technique of waveform notching in which the shapes of the notches are varied to determine the average energy content of the overall waveform. Through this arrangement, the operational efficiency of the A. C. machine is optimized. The control circuit includes a microcomputer and memory element which receive various parametric inputs and calculate optimized machine control data signals therefrom. The control data is asynchronously loaded into the inverter through an intermediate buffer (38). A base drive and overlap protection circuit is included to insure that both transistors of a complimentary pair are not conducting at the same time. In its preferred embodiment, the present invention is incorporated within an electric vehicle (10) employing a 144 VDC battery pack (32) and a three-phase induction motor (18).

  1. Effects of overlapping strings in pp collisions

    SciTech Connect

    Bierlich, Christian; Gustafson, Gösta; Lönnblad, Leif; Tarasov, Andrey

    2015-03-26

    In models for hadron collisions based on string hadronization, the strings are usually treated as independent, allowing no interaction between the confined colour fields. In studies of nucleus collisions it has been suggested that strings close in space can fuse to form "colour ropes." Such ropes are expected to give more strange particles and baryons, which also has been suggested as a signal for plasma formation. Overlapping strings can also be expected in pp collisions, where usually no phase transition is expected. In particular at the high LHC energies the expected density of strings is quite high. To investigate possible effects of rope formation, we present a model in which strings are allowed to combine into higher multiplets, giving rise to increased production of baryons and strangeness, or recombine into singlet structures and vanish. Also a crude model for strings recombining into junction structures is considered, again giving rise to increased baryon production. The models are implemented in the DIPSY MC event generator, using PYTHIA8 for hadronization, and comparison to pp minimum bias data, reveals improvement in the description of identified particle spectra.

  2. Multi-segment and multi-ply overlapping process of multi coupled activities based on valid information evolution

    NASA Astrophysics Data System (ADS)

    Wang, Zhiliang; Wang, Yunxia; Qiu, Shenghai

    2013-01-01

    Complex product development will inevitably face the design planning of the multi-coupled activities, and overlapping these activities could potentially reduce product development time, but there is a risk of the additional cost. Although the downstream task information dependence to the upstream task is already considered in the current researches, but the design process overall iteration caused by the information interdependence between activities is hardly discussed; especially the impact on the design process' overall iteration from the valid information accumulation process. Secondly, most studies only focus on the single overlapping process of two activities, rarely take multi-segment and multi-ply overlapping process of multi coupled activities into account; especially the inherent link between product development time and cost which originates from the overlapping process of multi coupled activities. For the purpose of solving the above problems, as to the insufficiency of the accumulated valid information in overlapping process, the function of the valid information evolution (VIE) degree is constructed. Stochastic process theory is used to describe the design information exchange and the valid information accumulation in the overlapping segment, and then the planning models of the single overlapping segment are built. On these bases, by analyzing overlapping processes and overlapping features of multi-coupling activities, multi-segment and multi-ply overlapping planning models are built; by sorting overlapping processes and analyzing the construction of these planning models, two conclusions are obtained: (1) As to multi-segment and multi-ply overlapping of multi coupled activities, the total decrement of the task set development time is the sum of the time decrement caused by basic overlapping segments, and minus the sum of the time increment caused by multiple overlapping segments; (2) the total increment of development cost is the sum of the cost

  3. Pulsed DF laser effects study

    NASA Astrophysics Data System (ADS)

    Hall, R. B.; Maher, W. E.; Nichols, D. B.

    1981-07-01

    This study of DF laser interaction with materials investigated the amount of energy coupled to targets. Large focal spot dimensions were obtained with the Boeing photo-initiated 50-1 pulsed chemical laser with a stable resonator. Effects experiments emphasized metallic targets, especially aluminum. The single pulse coupling results yielded absorbed fluence values greater than those obtained with comparable energies at 10.6 micrometer wavelength. Ambient pressure and angle of incidence were varied. Research results also showed multiple-pulse effect at DF wavelength. Multiple-pulse thermal coupling experiments with aluminum demonstrated that, after 10 shots on the same spot, the coupled fluence per pulse doubled. Because of target melting and vaporization, both the intrinsic absorptivity and the plasma enhanced coupled fluence of succeeding pulses is greatly increased. In general, the multiple pulse effect is intensity-dependent and is small at either low or high intensities. Energy deposition was tested for uniformity by measuring the rises in temperature at five locations within the focal spot with an array of thermocouples.

  4. Analysis of pulsed field gel electrophoresis profiles using multiple enzymes for predicting potential source reservoirs for strains of Salmonella Enteritidis and Salmonella Typhimurium isolated from humans.

    PubMed

    Son, Insook; Zheng, Jie; Keys, Christine E; Zhao, Shaohua; Meng, Jianghong; Brown, Eric W

    2013-06-01

    We reported previously on a highly discriminatory pulsed field gel electrophoresis-based (PFGE) subtyping scheme for Salmonella enterica serovar Enteritidis (SE) and Salmonella Typhimurium (ST) that relies on combined cluster analysis of up to six restriction enzymes. This approach allowed for the high-resolution separation of numerous poultry-derived SE and ST isolates into several distinct clusters that sorted along several geographical and host-linked boundaries. In this study, 101 SE and 151 ST strains isolated from poultry, swine, beef, mouse, and produce origins were combined with 62 human SE and ST isolates of unknown sources. PFGE profiles were generated across six restriction enzymes (XbaI, BlnI, SpeI, SfiI, PacI, and NotI) for human SE and ST isolates. The combined six-enzyme UPGMA trees of SE and ST revealed six separate origins of North American human SE isolates including one association with a "cosmopolitan" cluster of SEs from poultry originating in Scotland, Mexico, and China. In the case of ST, human isolates assorted readily along host lines rather than geographical partitions with the majority of human STs clustering in a larger group of STs of potential porcine origin. Such observations may underscore the ecological importance of poultry and pork reservoirs for SE and ST transmission to humans, respectively. In an examination of the relationship between enzyme diversity and congruence among enzymes, pairwise genetic diversity ranged from 6.5% to 9.7% for SE isolates and, more widely, from 17.5% to 27.4% for ST isolates. Phylogenetic congruence measures singled out XbaI, BlnI, and SfiI as most concordant for SE while XbaI and SfiI were most concordant among ST strains. Thus, these data provide the first proof of principal for concatenated PFGE, when coupled with sufficient enzyme numbers and combinations, as one effective means for predicting geographical and food source reservoirs for human isolates of these two highly prevalent Salmonella

  5. A Case of Reticulate Acropigmentation of Kitamura: Dowling Degos Disease Overlap with Unusual Clinical Manifestations

    PubMed Central

    Vasudevan, Biju; Verma, Rajesh; Badwal, Sonia; Pragasam, Vijendran; Moorchung, Nikhil; Badad, Ambresh

    2014-01-01

    Reticulate hyperpigmentary disorders are a group of rare genetic pigmentary abnormalities which includes reticulate acropigmentation of Kitamura (RAPK), Dowling-Degos disease (DD), reticulate acropigmentation of Dohi (RAPD), Haber's syndrome, and Galli-Galli disease. A 25-year-old male presented with asymptomatic dark-colored lesions on his hands and feet with light-colored skin lesions involving the trunk since three years. Dermatological examination revealed hyperpigmented macules in a reticulate pattern involving the dorsa of the hands and feet, front and sides of the neck, axillae, periorbital region, and groin. Multiple pits were present over both palms, with breaks in dermatoglyphics. He also had multiple nonacne facial scars predominantly on the nose and malar areas. The patient had overlapping features of RAPK and DDD. In addition, he also had hypopigmented macules and acneiform facial scars. Such an overlap of features of reticulate pigmentation has not been previously reported in the literature. PMID:24891663

  6. Effects of overlap and pass number in CO2 laser skin resurfacing: preliminary results of residual thermal damage, cell death, and wound healing

    NASA Astrophysics Data System (ADS)

    Ross, E. V.; Glatter, Robert D.; Duke, Daniella; Grevelink, Joop M.

    1997-05-01

    Newer carbon-dioxide laser systems incorporating short pulse and scanning technology have been used effectively to resurface the skin. Although scarring is rare, as the number of resurfacing cases has increased, some hypertrophic scarring has been observed. Previous dermabrasion and continuous wave (cw) carbon-dioxide studies suggest that depth of injury and/or thermal damage are important predictors of scarring for a given anatomic region. To determine if overlapping laser pulses/scans significantly altered wound healing, we examined residual thermal damage, cell death, and histologic and clinical wound healing in a farm pig. The Ultrapulse and SilkTouch systems were used with various radiant exposures, degrees of overlap, and numbers of passes. Thermal damage was assessed by histology, and dermal cell viability was measured with nitrotetrazolium blue staining. Presence or absence of clinical scarring was determined by noting textural change and loss of skin markings. We observed that thermal damage and cell death depth did not increase significantly with pass number; however, by double-pulsing or double-scanning sites, residual thermal damage and cell death depth were increased as much as 100% over areas without immediate overlap of laser impacts. Also, scarring was increased focally in areas with overlap. We conclude that immediate overlapping of carbon- dioxide laser pulses/scans is a significant risk factor in increasing thermal damage, cell death, and scarring.

  7. A Lower Bound for Quantifying Overlap Effects: An Empirical Approach

    SciTech Connect

    Bassetti, Federico

    1997-12-31

    Among the many features that are implemented in today`s microprocessors there are some that have the capability of reducing the execution time via overlapping of different operations. Overlapping of instructions with other instructions, and overlapping of computation with memory activities are the main way in which execution time is reduced. In this paper we will introduce a notion of overlap and its definition, and a few different ways to capture its effects. We will characterize some of the DOE Accelerated Strategic Computing Initiative (ASCI) benchmarks using the overlap and some other quantities related to it. Also, we will present a characterization of the overlap effects using a lower bound derived empirically from measured data. We will conclude by using the lower bound to estimate other components of the overall execution time.

  8. Use of overlapping buccal mucosa graft urethroplasty for complex anterior urethral strictures

    PubMed Central

    2015-01-01

    Complex anterior urethral stricture disease typically manifests as a symptomatic, severely narrowed, long stricture (or multiple strictures) in which conventional excision and/or augmentation is not feasible. Overlapping buccal mucosal graft urethroplasty (OBMGU) is an innovative hybrid technique, combining the well-established principles of dorsal and ventral graft augmentation to allow single stage reconstruction of complex anterior urethral strictures. In this review, we discuss the rationale, techniques, and outcomes of OBMGU for complex anterior urethral strictures. PMID:26813234

  9. Solving Fluid Flow Problems on Moving and Adaptive Overlapping Grids

    SciTech Connect

    Henshaw, W

    2005-07-28

    Solution of fluid dynamics problems on overlapping grids will be discussed. An overlapping grid consists of a set of structured component grids that cover a domain and overlap where they meet. Overlapping grids provide an effective approach for developing efficient and accurate approximations for complex, possibly moving geometry. Topics to be addressed include the reactive Euler equations, the incompressible Navier-Stokes equations and elliptic equations solved with a multigrid algorithm. Recent developments coupling moving grids and adaptive mesh refinement and preliminary parallel results will also be presented.

  10. Pulse Voltammetry.

    ERIC Educational Resources Information Center

    Osteryoung, Janet

    1983-01-01

    Discusses the nature of pulse voltammetry, indicating that its widespread use arises from good sensitivity and detection limits and from ease of application and low cost. Provides analytical and mechanistic applications of the procedure. (JN)

  11. MOPA pulsed fiber laser for silicon scribing

    NASA Astrophysics Data System (ADS)

    Yang, Limei; Huang, Wei; Deng, Mengmeng; Li, Feng

    2016-06-01

    A 1064 nm master oscillator power amplifier (MOPA) pulsed fiber laser is developed with flexible control over the pulse width, repetition frequency and peak power, and it is used to investigate the dependence of mono-crystalline silicon scribe depth on the laser pulse width, scanning speed and repeat times. Experimental results indicate that long pulses with low peak powers lead to deep ablation depths. We also demonstrate that the ablation depth grows fast with the scanning repeat times at first and progressively tends to be saturated when the repeat times reach a certain level. A thermal model considering the laser pulse overlapping effect that predicts the silicon temperature variation and scribe depth is employed to verify the experimental conclusions with reasonably close agreement. These conclusions are of great benefits to the optimization of the laser material processing with high efficiency.

  12. Detecting overlapping gravity waves using the S-Transform

    NASA Astrophysics Data System (ADS)

    Wright, C. J.; Gille, J. C.

    2013-05-01

    We discuss an adaptation to the widely-used Stockwell Transform based method for the detection of gravity waves to allow the detection of multiple overlapping waves. This adjusted method is applied to data from the High Resolution Dynamics Limb Sounder for the period of May 2006 and is found to change the measured distribution of gravity wave momentum flux on a global scale. An overall 68% increase in measured momentum flux is observed for the 20-30km altitude range, with significant regional variability. The largest absolute increase is over India, the Southern Ocean, and the Antarctic Peninsula, regions previously known to exhibit high levels of momentum flux. A strong relative increase is observed north of the equator, particularly in the tropics; analysis of the wavelength distribution of detected gravity waves shows that the majority of this increase is due to the detection of small vertical- and horizontal-scale waves which were presumably previously masked by higher-amplitude events in the same profile.

  13. Communications Overlapping in Fast Multipole Particle Dynamics Methods

    SciTech Connect

    Kurzak, Jakub; Pettitt, Bernard M.

    2005-03-01

    The research described in this product was performed in part in the Environmental Molecular Sciences Laboratory, a national scientific user facility sponsored by the Department of Energy's Office of Biological and Environmental Research and located at Pacific Northwest National Laboratory. In molecular dynamics the fast multipole method (FMM) is an attractive alternative to Ewald summation for calculating electrostatic interactions due to the operation counts. However when applied to small particle systems and taken to many processors it has a high demand for interprocessor communication. In a distributed memory environment this demand severely limits applicability of the FMM to systems with O(10 K atoms). We present an algorithm that allows for fine grained overlap of communication and computation, while not sacrificing synchronization and determinism in the equations of motion. The method avoids contention in the communication subsystem making it feasible to use the FMM for smaller systems on larger numbers of processors. Our algorithm also facilitates application of multiple time stepping techniques within the FMM. We present scaling at a reasonably high level of accuracy compared with optimized Ewald methods.

  14. Pulse stretcher

    DOEpatents

    Horton, James A.

    1994-01-01

    Apparatus (20) for increasing the length of a laser pulse to reduce its peak power without substantial loss in the average power of the pulse. The apparatus (20) uses a White cell (10) having a plurality of optical delay paths (18a-18d) of successively increasing number of passes between the field mirror (13) and the objective mirrors (11 and 12). A pulse (26) from a laser (27) travels through a multi-leg reflective path (28) between a beam splitter (21) and a totally reflective mirror (24) to the laser output (37). The laser pulse (26) is also simultaneously injected through the beam splitter (21) to the input mirrors (14a-14d) of the optical delay paths (18a-18d). The pulses from the output mirrors (16a-16d) of the optical delay paths (18a-18d) go simultaneously to the laser output (37) and to the input mirrors ( 14b-14d) of the longer optical delay paths. The beam splitter (21) is 50% reflective and 50% transmissive to provide equal attenuation of all of the pulses at the laser output (37).

  15. Multiple Database Searching: Techniques and Pitfalls

    ERIC Educational Resources Information Center

    Hawkins, Donald T.

    1978-01-01

    Problems involved in searching multiple data bases are discussed including indexing differences, overlap among data bases, variant spellings, and elimination of duplicate items from search output. Discussion focuses on CA Condensates, Inspec, and Metadex data bases. (J PF)

  16. A reexamination of the small overlap frontal crash.

    PubMed

    Scullion, Paul; Morgan, Richard M; Mohan, Pradeep; Kan, Cing-Dao; Shanks, Kurt; Jin, Wook; Tangirala, Ravi

    2010-01-01

    The objective of this study was to examine and rank the Small Overlap Frontal Crash as one of the eight-group taxonomy proposed by Ford. The Ford taxonomy classifies real-world frontal-impact crashes based on the National Automotive Sampling System (NASS). Frontally-impacted vehicles were identified for 1985 - 2008 model year passenger vehicles with Collision Deformation Classification (CDC) data from the 1995 - 2008 years of NASS. Small overlap frontal cases were identified where there was no engagement of the vehicle frame rails, and the direct damage was located entirely outside of the vehicle frame rails. The results are that full engagement and offset (offset category means the direct damage overlaps the vehicle frame rail, with the center of direct damage between the frame rails) were the most frequent crashes contributing 35% each. The frequency of the small overlap frontal was 6%. The risks of injury (AIS ≥ 2) for the full engagement, offset, and small overlap were 8%, 6%, and 3% respectively. For this study, the number of small overlap vehicles was 1,118 and the number of injured nearside occupants was 100. This study-following the Ford approach and reasonably identifying the location of the longitudinal rails based on CDC-suggests that the small overlap is at worst a moderately dangerous crash in the overall scheme of frontal crashes. The implications of this study are that the safety community should reexamine the significance of the small overlap frontal crash against an overall taxonomy of crashes. PMID:21050598

  17. An Exposition of Fischer's Model of Overlapping Contracts.

    ERIC Educational Resources Information Center

    Fields, T. Windsor; Hart, William R.

    1992-01-01

    Suggests how the classic model of overlapping contracts can be incorporated into the contract wage model of aggregate supply. Illustrates dynamics of macroeconomic adjustment following a shock to aggregate demand. Concludes that overlapping contracts do not prolong the adjustment process; rather, the longest remaining contract determines the time…

  18. Overlaps and Accumulation in the Use of Rehabilitation Services

    ERIC Educational Resources Information Center

    Pulkki, Jutta M.; Rissanen, Pekka; Raitanen, Jani A.; Viitanen, Elina A.

    2011-01-01

    The Finnish rehabilitation system is considered fragmented and multisectoral, and thus it may produce "multiclients" receiving inefficient and overlapping services. This paper addresses the overlaps and accumulation in the delivery of rehabilitation services in Finnish rehabilitation subsystems. Data were drawn from several administrative…

  19. Identifying Cluster Overlap with NORMIX Population Membership Probabilities.

    ERIC Educational Resources Information Center

    Price, Lydia J.

    1993-01-01

    The ability of the NORMIX algorithm to recover overlapping population structures was compared to the OVERCLUS procedure and another clustering procedure in a Monte Carlo study. NORMIX is found to be more accurate than other procedures in recovering overlapping population structure when appropriate implementation options are specified. (SLD)

  20. "Listenership" in Japanese: An Examination of Overlapping Listener Response

    ERIC Educational Resources Information Center

    Ikeda, Keiko

    2004-01-01

    This study focuses on a particular listening pattern in Japanese which occurs by overlapping with the current speaker's incrementing utterance. Applying the Conversational Analysis approach to conversational data, the study delineates how native speakers utilize overlapping listener responses to indicate their strong alignment, and why learners of…

  1. Shake for Sigma, Pray for Pi: Classroom Orbital Overlap Analogies

    ERIC Educational Resources Information Center

    Dicks, Andrew P.

    2011-01-01

    An introductory organic classroom demonstration is discussed where analogies are made between common societal hand contact and covalent bond formation. A handshake signifies creation of a [sigma] bond ("head-on" orbital overlap), whereas the action of praying illustrates "sideways" overlap and generation of a [pi] bond. The nature of orbital and…

  2. AREA OVERLAP METHOD FOR DETERMINING ADEQUATE CHROMATOGRAPHIC RESOLUTION

    EPA Science Inventory

    The Area Overlap method for evaluating analytical chromatograms is evaluated and compared with the Depth-of-the-Valley, IUPAC and Purnell criteria. The method is a resolution criterion based on the fraction of area contributed by an adjacent, overlapping peak. It accounts for bot...

  3. Overlap loss of manually and automatically guided mowers

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Overlap loss in harvesting machinery has been observed as a necessary inefficiency for many years. Each time a non-row-crop machine makes a pass in the field, it is favorable for the operator to overlap slightly into the previous pass (where the crop has already been cut), as opposed to undercutting...

  4. Spousal Network Overlap as a Basis for Spousal Support

    ERIC Educational Resources Information Center

    Cornwell, Benjamin

    2012-01-01

    The role social network structure plays in facilitating flows of support between spouses is often overlooked. This study examined whether levels of support between spouses depended on the degree of overlap between spouses' networks. Network overlap may enhance spouses' support capacities by increasing their understanding of each other's support…

  5. Overlapping and Non-overlapping Functions of Condensins I and II in Neural Stem Cell Divisions

    PubMed Central

    Nishide, Kenji; Hirano, Tatsuya

    2014-01-01

    During development of the cerebral cortex, neural stem cells (NSCs) divide symmetrically to proliferate and asymmetrically to generate neurons. Although faithful segregation of mitotic chromosomes is critical for NSC divisions, its fundamental mechanism remains unclear. A class of evolutionarily conserved protein complexes, known as condensins, is thought to be central to chromosome assembly and segregation among eukaryotes. Here we report the first comprehensive genetic study of mammalian condensins, demonstrating that two different types of condensin complexes (condensins I and II) are both essential for NSC divisions and survival in mice. Simultaneous depletion of both condensins leads to severe defects in chromosome assembly and segregation, which in turn cause DNA damage and trigger p53-induced apoptosis. Individual depletions of condensins I and II lead to slower loss of NSCs compared to simultaneous depletion, but they display distinct mitotic defects: chromosome missegregation was observed more prominently in NSCs depleted of condensin II, whereas mitotic delays were detectable only in condensin I-depleted NSCs. Remarkably, NSCs depleted of condensin II display hyperclustering of pericentric heterochromatin and nucleoli, indicating that condensin II, but not condensin I, plays a critical role in establishing interphase nuclear architecture. Intriguingly, these defects are taken over to postmitotic neurons. Our results demonstrate that condensins I and II have overlapping and non-overlapping functions in NSCs, and also provide evolutionary insight into intricate balancing acts of the two condensin complexes. PMID:25474630

  6. Instrument Identification in Polyphonic Music: Feature Weighting to Minimize Influence of Sound Overlaps

    NASA Astrophysics Data System (ADS)

    Kitahara, Tetsuro; Goto, Masataka; Komatani, Kazunori; Ogata, Tetsuya; Okuno, Hiroshi G.

    2006-12-01

    We provide a new solution to the problem of feature variations caused by the overlapping of sounds in instrument identification in polyphonic music. When multiple instruments simultaneously play, partials (harmonic components) of their sounds overlap and interfere, which makes the acoustic features different from those of monophonic sounds. To cope with this, we weight features based on how much they are affected by overlapping. First, we quantitatively evaluate the influence of overlapping on each feature as the ratio of the within-class variance to the between-class variance in the distribution of training data obtained from polyphonic sounds. Then, we generate feature axes using a weighted mixture that minimizes the influence via linear discriminant analysis. In addition, we improve instrument identification using musical context. Experimental results showed that the recognition rates using both feature weighting and musical context were 84.1[InlineEquation not available: see fulltext.] for duo, 77.6[InlineEquation not available: see fulltext.] for trio, and 72.3[InlineEquation not available: see fulltext.] for quartet; those without using either were 53.4, 49.6, and 46.5[InlineEquation not available: see fulltext.], respectively.

  7. Overlapping Networks Engaged during Spoken Language Production and Its Cognitive Control

    PubMed Central

    Wise, Richard J.S.; Mehta, Amrish; Leech, Robert

    2014-01-01

    Spoken language production is a complex brain function that relies on large-scale networks. These include domain-specific networks that mediate language-specific processes, as well as domain-general networks mediating top-down and bottom-up attentional control. Language control is thought to involve a left-lateralized fronto-temporal-parietal (FTP) system. However, these regions do not always activate for language tasks and similar regions have been implicated in nonlinguistic cognitive processes. These inconsistent findings suggest that either the left FTP is involved in multidomain cognitive control or that there are multiple spatially overlapping FTP systems. We present evidence from an fMRI study using multivariate analysis to identify spatiotemporal networks involved in spoken language production in humans. We compared spoken language production (Speech) with multiple baselines, counting (Count), nonverbal decision (Decision), and “rest,” to pull apart the multiple partially overlapping networks that are involved in speech production. A left-lateralized FTP network was activated during Speech and deactivated during Count and nonverbal Decision trials, implicating it in cognitive control specific to sentential spoken language production. A mirror right-lateralized FTP network was activated in the Count and Decision trials, but not Speech. Importantly, a second overlapping left FTP network showed relative deactivation in Speech. These three networks, with distinct time courses, overlapped in the left parietal lobe. Contrary to the standard model of the left FTP as being dominant for speech, we revealed a more complex pattern within the left FTP, including at least two left FTP networks with competing functional roles, only one of which was activated in speech production. PMID:24966373

  8. Analysis of radial and longitudinal force of plasma wakefield generated by a chirped pulse laser

    SciTech Connect

    Ghasemi, Leila; Afhami, Saeedeh; Eslami, Esmaeil

    2015-08-15

    In present paper, the chirp effect of an electromagnetic pulse via an analytical model of wakefield generation is studied. Different types of chirps are employed in this study. Our results show that by the use of nonlinear chirped pulse the longitudinal wakefield and focusing force is stronger than that of linear chirped pulse. It is indicated that quadratic nonlinear chirped pulses are globally much efficient than periodic nonlinear chirped pulses. Our calculations also predict that in nonlinear chirped pulse case, the overlap of focusing and accelerating regions is broader than that achieved in linear chirped pulse.

  9. Compressed Sensing Inspired Image Reconstruction from Overlapped Projections

    PubMed Central

    Yang, Lin; Lu, Yang; Wang, Ge

    2010-01-01

    The key idea discussed in this paper is to reconstruct an image from overlapped projections so that the data acquisition process can be shortened while the image quality remains essentially uncompromised. To perform image reconstruction from overlapped projections, the conventional reconstruction approach (e.g., filtered backprojection (FBP) algorithms) cannot be directly used because of two problems. First, overlapped projections represent an imaging system in terms of summed exponentials, which cannot be transformed into a linear form. Second, the overlapped measurement carries less information than the traditional line integrals. To meet these challenges, we propose a compressive sensing-(CS-) based iterative algorithm for reconstruction from overlapped data. This algorithm starts with a good initial guess, relies on adaptive linearization, and minimizes the total variation (TV). Then, we demonstrated the feasibility of this algorithm in numerical tests. PMID:20689701

  10. Combinatorial gene regulation by modulation of relative pulse timing

    PubMed Central

    Lin, Yihan; Sohn, Chang Ho; Dalal, Chiraj K.; Cai, Long; Elowitz, Michael B.

    2015-01-01

    Studies of individual living cells have revealed that many transcription factors activate in dynamic, and often stochastic, pulses within the same cell. However, it has remained unclear whether cells might modulate the relative timing of these pulses to control gene expression. Here, using quantitative single-cell time-lapse imaging of Saccharomyces cerevisiae, we show that the pulsatile transcription factors Msn2 and Mig1 combinatorially regulate their target genes through modulation of their relative pulse timing. The activator Msn2 and repressor Mig1 pulsed in either a temporally overlapping or non-overlapping manner during their transient response to different inputs, with only the non-overlapping dynamics efficiently activating target gene expression. Similarly, under constant environmental conditions, where Msn2 and Mig1 exhibit sporadic pulsing, glucose concentration modulated the temporal overlap between pulses of the two factors. Together, these results reveal a time-based mode of combinatorial gene regulation. Regulation through relative signal timing is common in engineering and neurobiology, and these results suggest that it could also function broadly within the signaling and regulatory systems of the cell. PMID:26466562

  11. Prevention of overlapping prescriptions of psychotropic drugs by community pharmacists.

    PubMed

    Shimane, Takuya; Matsumoto, Toshihiko; Wada, Kiyoshi

    2012-10-01

    The nonmedical use or abuse of prescription drugs, including psychotropic medicines, is a growing health problem in Japan. Patient access to psychotropic drugs, specifically from the oversupply of medications due to overlapping prescriptions, may increase the risk of drug abuse and dependence. However, very little is known about such overlapping prescriptions. Today, the dispensing of prescriptions is generally moving from inside to outside of hospitals, with psychotropic drugs mainly dispensed at community pharmacies. In this study, we used health insurance claims (i.e., receipts) for dispensing as the main source of information in an investigation of overlapping prescriptions of psychotropic drugs. A total of 119 patients were found to have received overlapping prescriptions, as identified by community pharmacists who were members of the Saitama Pharmaceutical Association, using patient medication records, followed by medication counseling and prescription notes for the patient. According to our findings, the most frequently overlapping medication was etizolam. Etizolam can be prescribed for more than 30 days since it is not regulated under Japanese law as a "psychotropic drug." Generally, when a drug can be prescribed for a greater number of days, it increases the likelihood of an overlapping prescription during the same period. As a result, the long-term prescription of etizolam increases the risk of overlapping prescriptions. We also found that the patients who received overlapping prescriptions of etizolam were mostly elderly and the most common pattern was prescription from both internal medicine and orthopedics physicians. Etizolam has wide range of indications that are covered by health insurance. Our results suggest that patients who received overlapping prescriptions of etizolam may receive prescriptions from different prescribers for different purposes. Therefore, it may be appropriate to regulate etizolam as a "psychotropic drug" under Japanese law

  12. Treatment Pulse Application for Magnetic Stimulation

    PubMed Central

    Choi, Sun-Seob; Kim, Whi-Young

    2011-01-01

    Treatment and diagnosis can be made in difficult areas simply by changing the output pulse form of the magnetic stimulation device. However, there is a limitation in the range of treatments and diagnoses of a conventional sinusoidal stimulation treatment pulse because the intensity, width, and form of the pulse must be changed according to the lesion type. This paper reports a multidischarge method, where the stimulation coils were driven in sequence via multiple switching control. The limitation of the existing simple sinusoidal pulse form could be overcome by changing the intensity, width, and form of the pulse. In this study, a new sequential discharge method was proposed to freely alter the pulse width. The output characteristics of the stimulation treatment pulse were examined according to the trigger signal delay applied to the switch at each stage by applying a range of superposition pulses to the magnetic simulation device, which is widely used in industry and medicine. PMID:21738404

  13. Overlapped optics induced perfect coherent effects.

    PubMed

    Li, Jian Jie; Zang, Xiao Fei; Mao, Jun Fa; Tang, Min; Zhu, Yi Ming; Zhuang, Song Lin

    2013-01-01

    For traditional coherent effects, two separated identical point sources can be interfered with each other only when the optical path difference is integer number of wavelengths, leading to alternate dark and bright fringes for different optical path difference. For hundreds of years, such a perfect coherent condition seems insurmountable. However, in this paper, based on transformation optics, two separated in-phase identical point sources can induce perfect interference with each other without satisfying the traditional coherent condition. This shifting illusion media is realized by inductor-capacitor transmission line network. Theoretical analysis, numerical simulations and experimental results are performed to confirm such a kind of perfect coherent effect and it is found that the total radiation power of multiple elements system can be greatly enhanced. Our investigation may be applicable to National Ignition Facility (NIF), Inertial Confined Fusion (ICF) of China, LED lighting technology, terahertz communication, and so on. PMID:24356577

  14. Multiple acousto-optic q-switch

    DOEpatents

    Deason, Vance A.

    1993-01-01

    An improved dynamic moire interferometer comprised of a lasing medium providing a plurality of beams of coherent light, a multiple q-switch producing multiple trains of 100,000 or more pulses per second, a combining means collimating multiple trains of pulses into substantially a single train and directing beams to specimen gratings affixed to a test material, and a controller, triggering and sequencing the emission of the pulses with the occurrence and recording of a dynamic loading event.

  15. Multiple acousto-optic q-switch

    DOEpatents

    Deason, Vance A.

    1993-12-07

    An improved dynamic moire interferometer comprised of a lasing medium providing a plurality of beams of coherent light, a multiple q-switch producing multiple trains of 100,000 or more pulses per second, a combining means collimating multiple trains of pulses into substantially a single train and directing beams to specimen gratings affixed to a test material, and a controller, triggering and sequencing the emission of the pulses with the occurrence and recording of a dynamic loading event.

  16. An extension to artifact-free projection overlaps

    SciTech Connect

    Lin, Jianyu

    2015-05-15

    Purpose: In multipinhole single photon emission computed tomography, the overlapping of projections has been used to increase sensitivity. Avoiding artifacts in the reconstructed image associated with projection overlaps (multiplexing) is a critical issue. In our previous report, two types of artifact-free projection overlaps, i.e., projection overlaps that do not lead to artifacts in the reconstructed image, were formally defined and proved, and were validated via simulations. In this work, a new proposition is introduced to extend the previously defined type-II artifact-free projection overlaps so that a broader range of artifact-free overlaps is accommodated. One practical purpose of the new extension is to design a baffle window multipinhole system with artifact-free projection overlaps. Methods: First, the extended type-II artifact-free overlap was theoretically defined and proved. The new proposition accommodates the situation where the extended type-II artifact-free projection overlaps can be produced with incorrectly reconstructed portions in the reconstructed image. Next, to validate the theory, the extended-type-II artifact-free overlaps were employed in designing the multiplexing multipinhole spiral orbit imaging systems with a baffle window. Numerical validations were performed via simulations, where the corresponding 1-pinhole nonmultiplexing reconstruction results were used as the benchmark for artifact-free reconstructions. The mean square error (MSE) was the metric used for comparisons of noise-free reconstructed images. Noisy reconstructions were also performed as part of the validations. Results: Simulation results show that for noise-free reconstructions, the MSEs of the reconstructed images of the artifact-free multiplexing systems are very similar to those of the corresponding 1-pinhole systems. No artifacts were observed in the reconstructed images. Therefore, the testing results for artifact-free multiplexing systems designed using the

  17. When Is It Appropriate to Talk? Managing Overlapping Talk in Multi-Participant Voice-Based Chat Rooms

    ERIC Educational Resources Information Center

    Jenks, Christopher Joseph

    2009-01-01

    There has been extensive reporting on the interactional characteristics of multi-participant text-based chat rooms. In these chat rooms there are several students typing at the same time, often on more than one topic. As a result, it is not uncommon to see multiple overlapping utterances. Despite these communicative challenges, research suggests…

  18. Overlapping verbal, relational, physical, and electronic forms of bullying in adolescence: influence of school context.

    PubMed

    Bradshaw, Catherine P; Waasdorp, Tracy Evian; Johnson, Sarah Lindstrom

    2015-01-01

    Interest in youths' experience of the various forms of bullying has grown due to the numerous social-emotional correlates associated with bullying. Only recently has there been consideration of the school context in light of these associations. The current study examined the overlap in four different forms of bullying that youth commonly experience (i.e., verbal, relational, physical, electronic), with the aim of understanding their association with social-emotional correlates (i.e., internalizing symptoms, externalizing symptoms, retaliatory attitudes) and exploring associations with school contextual factors such as supervision, school physical disorder, and behavioral expectations. Self-report data on the forms of peer bullying were collected from 24,620 adolescents (Grades 9-12; M age = 15.98, SD age = 1.32) enrolled in 52 high schools. Latent class analyses indicated significant overlap in the different forms of bullying victimization, with youth experiencing multiple forms of bullying reporting the greatest risk for social-emotional problems. A series of two-level hierarchical linear models revealed that indicators of school physical disorder and a lack of positive behavioral expectations were associated with increased risk for multiple forms of bullying. Several gender and age differences were also observed in relation to the patterns of bullying experienced. These findings extend prior research by emphasizing a potential link between the overlap in different forms of bullying and school contextual factors, even after controlling for individual-level risk factors. PMID:24738548

  19. Space-use scaling and home range overlap in primates

    PubMed Central

    Pearce, Fiona; Carbone, Chris; Cowlishaw, Guy; Isaac, Nick J. B.

    2013-01-01

    Space use is an important aspect of animal ecology, yet our understanding is limited by a lack of synthesis between interspecific and intraspecific studies. We present analyses of a dataset of 286 estimates of home range overlap from 100 primate species, with comparable samples for other space-use traits. To the best of our knowledge, this represents the first multispecies study using overlap data estimated directly from field observations. We find that space-use traits in primates are only weakly related to body mass, reflecting their largely arboreal habits. Our results confirm a theory that home range overlap explains the differences in allometric scaling between population density and home range size. We then test a suite of hypotheses to explain home range overlap, both among and within species. We find that overlap is highest for larger-bodied species living in large home ranges at high population densities, where annual rainfall is low, and is higher for arboreal than terrestrial species. Most of these results are consistent with the economics of resource defence, although the predictions of one specific theory of home range overlap are not supported. We conclude that home range overlap is somewhat predictable, but the theoretical basis of animal space use remains patchy. PMID:23193124

  20. Overlap distributions for quantum quenches in the anisotropic Heisenberg chain

    NASA Astrophysics Data System (ADS)

    Mazza, Paolo P.; Stéphan, Jean-Marie; Canovi, Elena; Alba, Vincenzo; Brockmann, Michael; Haque, Masudul

    2016-01-01

    The dynamics after a quantum quench is determined by the weights of the initial state in the eigenspectrum of the final Hamiltonian, i.e. by the distribution of overlaps in the energy spectrum. We present an analysis of such overlap distributions for quenches of the anisotropy parameter in the one-dimensional anisotropic spin-1/2 Heisenberg model (XXZ chain). We provide an overview of the form of the overlap distribution for quenches from various initial anisotropies to various final ones, using numerical exact diagonalization. We show that if the system is prepared in the antiferromagnetic Néel state (infinite anisotropy) and released into a non-interacting setup (zero anisotropy, XX point) only a small fraction of the final eigenstates gives contributions to the post-quench dynamics, and that these eigenstates have identical overlap magnitudes. We derive expressions for the overlaps, and present the selection rules that determine the final eigenstates having nonzero overlap. We use these results to derive concise expressions for time-dependent quantities (Loschmidt echo, longitudinal and transverse correlators) after the quench. We use perturbative analyses to understand the overlap distribution for quenches from infinite to small nonzero anisotropies, and for quenches from large to zero anisotropy.

  1. How to decontaminate overlapping fat jets

    NASA Astrophysics Data System (ADS)

    Hamaguchi, Koichi; Liew, Seng Pei; Stoll, Martin

    2015-07-01

    At the LHC, tagging boosted heavy particle resonances which decay hadronically, such as top quarks and Higgs bosons, can play an essential role in new physics searches. In events with high multiplicity, however, the standard approach to tag boosted resonances by a large-radius fat jet becomes difficult because the resonances are not well separated from other hard radiation. In this paper, we propose a different approach to tag and reconstruct boosted resonances by using the recently proposed mass-jump jet algorithm. A key feature of the algorithm is the flexible radius of the jets, which results from a terminating veto that prevents the recombination of two hard prongs if their combined jet mass is substantially larger than the masses of the separate prongs. The idea of collecting jets in "buckets" is also used. As an example, we consider the fully hadronic final state of pair-produced vectorlike top partners at the LHC, p p →T T ¯→t t ¯H H , and show that the new approach works well. We also show that tagging and kinematic reconstruction of boosted top quarks and Higgs bosons are possible with good quality even in these very busy final states. The vectorlike top partners are kinematically reconstructed, which allows their direct mass measurement.

  2. PULSE COUNTER

    DOEpatents

    Trumbo, D.E.

    1959-02-10

    A transistorized pulse-counting circuit adapted for use with nuclear radiation detecting detecting devices to provide a small, light weight portable counter is reported. The small size and low power requirements of the transistor are of particular value in this instance. The circuit provides an adjustable count scale with a single transistor which is triggered by the accumulated charge on a storage capacitor.

  3. Selective excitation with shaped pulses transported through a fiber using reverse propagation

    NASA Astrophysics Data System (ADS)

    Pawłowska, Monika; Achazi, Georg; Rahmat, Nona; Patas, Alexander; Lindinger, Albrecht

    2012-07-01

    Reverse propagation is a numeric technique that makes it possible to obtain arbitrarily shaped pulses after propagation through a fiber in the nonlinear regime. We apply it to achieve selective two-photon excitation of dyes that have overlapping absorption spectra with pulses transported through the fiber. By comparing both contrast and signal level it is shown that phase and amplitude shaped pulses generated using reverse propagation are superior to pulses with antisymmetric phase despite loss caused by amplitude shaping.

  4. Detecting overlapping protein complexes by rough-fuzzy clustering in protein-protein interaction networks.

    PubMed

    Wu, Hao; Gao, Lin; Dong, Jihua; Yang, Xiaofei

    2014-01-01

    In this paper, we present a novel rough-fuzzy clustering (RFC) method to detect overlapping protein complexes in protein-protein interaction (PPI) networks. RFC focuses on fuzzy relation model rather than graph model by integrating fuzzy sets and rough sets, employs the upper and lower approximations of rough sets to deal with overlapping complexes, and calculates the number of complexes automatically. Fuzzy relation between proteins is established and then transformed into fuzzy equivalence relation. Non-overlapping complexes correspond to equivalence classes satisfying certain equivalence relation. To obtain overlapping complexes, we calculate the similarity between one protein and each complex, and then determine whether the protein belongs to one or multiple complexes by computing the ratio of each similarity to maximum similarity. To validate RFC quantitatively, we test it in Gavin, Collins, Krogan and BioGRID datasets. Experiment results show that there is a good correspondence to reference complexes in MIPS and SGD databases. Then we compare RFC with several previous methods, including ClusterONE, CMC, MCL, GCE, OSLOM and CFinder. Results show the precision, sensitivity and separation are 32.4%, 42.9% and 81.9% higher than mean of the five methods in four weighted networks, and are 0.5%, 11.2% and 66.1% higher than mean of the six methods in five unweighted networks. Our method RFC works well for protein complexes detection and provides a new insight of network division, and it can also be applied to identify overlapping community structure in social networks and LFR benchmark networks. PMID:24642838

  5. Detecting Overlapping Protein Complexes by Rough-Fuzzy Clustering in Protein-Protein Interaction Networks

    PubMed Central

    Wu, Hao; Gao, Lin; Dong, Jihua; Yang, Xiaofei

    2014-01-01

    In this paper, we present a novel rough-fuzzy clustering (RFC) method to detect overlapping protein complexes in protein-protein interaction (PPI) networks. RFC focuses on fuzzy relation model rather than graph model by integrating fuzzy sets and rough sets, employs the upper and lower approximations of rough sets to deal with overlapping complexes, and calculates the number of complexes automatically. Fuzzy relation between proteins is established and then transformed into fuzzy equivalence relation. Non-overlapping complexes correspond to equivalence classes satisfying certain equivalence relation. To obtain overlapping complexes, we calculate the similarity between one protein and each complex, and then determine whether the protein belongs to one or multiple complexes by computing the ratio of each similarity to maximum similarity. To validate RFC quantitatively, we test it in Gavin, Collins, Krogan and BioGRID datasets. Experiment results show that there is a good correspondence to reference complexes in MIPS and SGD databases. Then we compare RFC with several previous methods, including ClusterONE, CMC, MCL, GCE, OSLOM and CFinder. Results show the precision, sensitivity and separation are 32.4%, 42.9% and 81.9% higher than mean of the five methods in four weighted networks, and are 0.5%, 11.2% and 66.1% higher than mean of the six methods in five unweighted networks. Our method RFC works well for protein complexes detection and provides a new insight of network division, and it can also be applied to identify overlapping community structure in social networks and LFR benchmark networks. PMID:24642838

  6. 42 CFR 73.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... have been genetically modified. (d) Overlap select agents or toxins that meet any of the following... Elements, Recombinant and/or Synthetic Nucleic Acids, and Recombinant and/or Synthetic Organisms:...

  7. 42 CFR 73.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... genetically modified. (d) Overlap select agents or toxins that meet any of the following criteria are excluded... Equine Encephalitis virus (c) Genetic Elements, Recombinant Nucleic Acids, and Recombinant Organisms:...

  8. 42 CFR 73.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... genetically modified. (d) Overlap select agents or toxins that meet any of the following criteria are excluded... Equine Encephalitis virus (c) Genetic Elements, Recombinant Nucleic Acids, and Recombinant Organisms:...

  9. 42 CFR 73.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... have been genetically modified. (d) Overlap select agents or toxins that meet any of the following... Elements, Recombinant and/or Synthetic Nucleic Acids, and Recombinant and/or Synthetic Organisms:...

  10. 42 CFR 73.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... genetically modified. (d) Overlap select agents or toxins that meet any of the following criteria are excluded... Equine Encephalitis virus (c) Genetic Elements, Recombinant Nucleic Acids, and Recombinant Organisms:...

  11. General Properties of Overlap Operators in Disordered Quantum Spin Systems

    NASA Astrophysics Data System (ADS)

    Itoi, C.

    2016-04-01

    We study short-range quantum spin systems with Gaussian disorder. We obtain quantum mechanical extensions of the Ghirlanda-Guerra identities. We discuss properties of overlap spin operators with these identities.

  12. Analysis of Surface Roughness at Overlapping Laser Shock Peening

    NASA Astrophysics Data System (ADS)

    Dai, F. Z.; Zhang, Z. D.; Zhou, J. Z.; Lu, J. Z.; Zhang, Y. K.

    2016-02-01

    The overlapping effects on surface roughness are studied when samples are treated by laser shock peening (LSP). Surface roughness of overlapped circular laser spot is calculated by ISO 25178 height parameters. The usually used overlapping styles namely isosceles-right-triangle-style (AAP) and equilateral-triangle-style (AAA) are carefully investigated when the overlapping degree in x-axis (ηx) is below 50%. Surface roughness of isosceles-right-triangle-style attains its minimum value at ηx of 29.3%, and attains its maximum value at ηx of 43.6%. Surface roughness of equilateral-triangle-style attains its minimum value at ηx of 42.3%, and attains its maximum value at ηx of 32%. Experimental results are well consistent with theoretical analysis.

  13. Encoding and decoding of femtosecond pulses.

    PubMed

    Weiner, A M; Heritage, J P; Salehi, J A

    1988-04-01

    We demonstrate the spreading of femtosecond optical pulses into picosecond-duration pseudonoise bursts. Spreading is accomplished by encoding pseudorandom binary phase codes onto the optical frequency spectrum. Subsequent decoding of the spectral phases restores the original pulse. We propose that frequency-domain encoding and decoding of coherent ultrashort pulses could form the basis for a rapidly reconfigurable, code-division multiple-access optical telecommunications network. PMID:19745879

  14. A Reexamination of the Small Overlap Frontal Crash

    PubMed Central

    Scullion, Paul; Morgan, Richard M.; Mohan, Pradeep; Kan, Cing-Dao; Shanks, Kurt; Jin, Wook; Tangirala, Ravi

    2010-01-01

    The objective of this study was to examine and rank the Small Overlap Frontal Crash as one of the eight-group taxonomy proposed by Ford. The Ford taxonomy classifies real-world frontal-impact crashes based on the National Automotive Sampling System (NASS). Frontally-impacted vehicles were identified for 1985 – 2008 model year passenger vehicles with Collision Deformation Classification (CDC) data from the 1995 – 2008 years of NASS. Small overlap frontal cases were identified where there was no engagement of the vehicle frame rails, and the direct damage was located entirely outside of the vehicle frame rails. The results are that full engagement and offset (offset category means the direct damage overlaps the vehicle frame rail, with the center of direct damage between the frame rails) were the most frequent crashes contributing 35% each. The frequency of the small overlap frontal was 6%. The risks of injury (AIS ≥ 2) for the full engagement, offset, and small overlap were 8%, 6%, and 3% respectively. For this study, the number of small overlap vehicles was 1,118 and the number of injured nearside occupants was 100. This study—following the Ford approach and reasonably identifying the location of the longitudinal rails based on CDC—suggests that the small overlap is at worst a moderately dangerous crash in the overall scheme of frontal crashes. The implications of this study are that the safety community should reexamine the significance of the small overlap frontal crash against an overall taxonomy of crashes. PMID:21050598

  15. Errors in paleomagnetism: Structural control on overlapped vectors - mathematical models

    NASA Astrophysics Data System (ADS)

    Rodríguez-Pintó, A.; Ramón, M. J.; Oliva-Urcia, B.; Pueyo, E. L.; Pocoví, A.

    2011-05-01

    The reliability of paleomagnetic data is a keystone to obtain trustable kinematics interpretations. The determination of the real paleomagnetic component recorded at certain time in the geological evolution of a rock can be affected by several sources of errors: inclination shallowing, declination biases caused by incorrect restoration to the ancient field, internal deformation of rock volumes and lack of isolation of the paleomagnetic primary vector during the laboratory procedures (overlapping of components). These errors will limit or impede the validity of paleomagnetism as the only three-dimension reference. This paper presents the first systematic modeling of the effect of overlapped vectors referred to declination, inclination and stability tests taking into account the key variables: orientation of a primary and secondary (overlapped to the primary) vectors, degree of overlapping (intensity ratio of primary and secondary paleomagnetic vectors) and the fold axis orientation and dip of bedding plane. In this way, several scenarios of overlapping have been modeled in different fold geometries considering both polarities and all the variables aforementioned, allowing to calculate the deviations of the vector obtained in the laboratory (overlapped) with respect to the paleomagnetic reference (not overlapped). Observations from the models confirm that declination errors are larger than the inclination ones. In addition to the geometry factor, errors are mainly controlled by the relative magnitude of the primary respect to the secondary component (P/S ratio). We observe larger asymmetries and bigger magnitudes of errors along the fold location if the primary and secondary records have different polarities. If the primary record (declination) and the fold axis orientation are perpendicular ( Ω = 90°), errors reach maximum magnitudes and larger asymmetries along the fold surface (different dips). The effect of overlapping in the fold and reversal tests is also

  16. Dynamical overlap fermions in the epsilon-regime

    NASA Astrophysics Data System (ADS)

    Fukaya, Hidenori

    2006-12-01

    We report on the two-flavor QCD simulation in the ɛ-regime using the overlap fermion formu- lation. Sea quark mass is reduced to ˜ 2 MeV on a 163 × 32 lattice with the lattice spacing a 0.11 fm. Topological charge is fixed at Q = 0. We compare the eigenvalue distribution of the overlap-Dirac operator with the prediction of the chiral random matrix theory. Preliminary results on meson correlators are also reported.

  17. 3D GRASE pulsed arterial spin labeling at multiple inflow times in patients with long arterial transit times: comparison with dynamic susceptibility-weighted contrast-enhanced MRI at 3 Tesla

    PubMed Central

    Martin, Steve Z; Madai, Vince I; von Samson-Himmelstjerna, Federico C; Mutke, Matthias A; Bauer, Miriam; Herzig, Cornelius X; Hetzer, Stefan; Günther, Matthias; Sobesky, Jan

    2015-01-01

    Pulsed arterial spin labeling (PASL) at multiple inflow times (multi-TIs) is advantageous for the measurement of brain perfusion in patients with long arterial transit times (ATTs) as in steno-occlusive disease, because bolus-arrival-time can be measured and blood flow measurements can be corrected accordingly. Owing to its increased signal-to-noise ratio, a combination with a three-dimensional gradient and spin echo (GRASE) readout allows acquiring a sufficient number of multi-TIs within a clinically feasible acquisition time of 5 minutes. We compared this technique with the clinical standard dynamic susceptibility-weighted contrast-enhanced imaging–magnetic resonance imaging in patients with unilateral stenosis >70% of the internal carotid or middle cerebral artery (MCA) at 3 Tesla. We performed qualitative (assessment by three expert raters) and quantitative (region of interest (ROI)/volume of interest (VOI) based) comparisons. In 43 patients, multi-TI PASL-GRASE showed perfusion alterations with moderate accuracy in the qualitative analysis. Quantitatively, moderate correlation coefficients were found for the MCA territory (ROI based: r=0.52, VOI based: r=0.48). In the anterior cerebral artery (ACA) territory, a readout related right-sided susceptibility artifact impaired correlation (ROI based: r=0.29, VOI based: r=0.34). Arterial transit delay artifacts were found only in 12% of patients. In conclusion, multi-TI PASL-GRASE can correct for arterial transit delay in patients with long ATTs. These results are promising for the transfer of ASL to the clinical practice. PMID:25407272

  18. Arterial Transit Time Mapping Obtained by Pulsed Continuous 3D ASL Imaging with Multiple Post-Label Delay Acquisitions: Comparative Study with PET-CBF in Patients with Chronic Occlusive Cerebrovascular Disease

    PubMed Central

    Tsujikawa, Tetsuya; Kimura, Hirohiko; Matsuda, Tsuyoshi; Fujiwara, Yasuhiro; Isozaki, Makoto; Kikuta, Ken-ichiro; Okazawa, Hidehiko

    2016-01-01

    Arterial transit time (ATT) is most crucial for measuring absolute cerebral blood flow (CBF) by arterial spin labeling (ASL), a noninvasive magnetic resonance (MR) perfusion assessment technique, in patients with chronic occlusive cerebrovascular disease. We validated ASL-CBF and ASL-ATT maps calculated by pulsed continuous ASL (pCASL) with multiple post-label delay acquisitions in patients with occlusive cerebrovascular disease. Fifteen patients underwent MR scans, including pCASL, and positron emission tomography (PET) scans with 15O-water to obtain PET-CBF. MR acquisitions with different post-label delays (1.0, 1.5, 2.0, 2.5 and 3.0 sec) were also obtained for ATT correction. The theoretical framework of 2-compartmental model (2CM) was also used for the delay compensation. ASL-CBF and ASL-ATT were calculated based on the proposed 2CM, and the effect on the CBF values and the ATT correction characteristics were discussed. Linear regression analyses were performed both on pixel-by-pixel and region-of-interest bases in the middle cerebral artery (MCA) territory. There were significant correlations between ASL-CBF and PET-CBF both for voxel values (r = 0.74 ± 0.08, slope: 0.87 ± 0.22, intercept: 6.1 ± 4.9) and for the MCA territorial comparison in both affected (R2 = 0.67, y = 0.83x + 6.3) and contralateral sides (R2 = 0.66, y = 0.74x + 6.3). ASL-ATTs in the affected side were significantly longer than those in the contralateral side (1.51 ± 0.41 sec and 1.12 ± 0.30 sec, respectively, p <0.0005). CBF measurement using pCASL with delay compensation was feasible and fairly accurate even in altered hemodynamic states. PMID:27275779

  19. Overlap in prevalence between various types of environmental intolerance.

    PubMed

    Palmquist, Eva; Claeson, Anna-Sara; Neely, Gregory; Stenberg, Berndt; Nordin, Steven

    2014-01-01

    Environmental intolerance (EI) is characterized by attribution of several, multisystem symptoms to specific environmental exposures, such as exposure to odorous/pungent chemicals, certain buildings, electromagnetic fields (EMFs) and everyday sounds. The symptoms are medically unexplained, non-specific and the symptoms overlap between different types of EI. To approach the issue of underlying mechanisms the matter of overlap in prevalence between intolerances can provide valuable information. The aim of the study was to examine if the overlap between intolerance to odorous/pungent chemicals, certain buildings, EMFs and sounds is larger than the expected overlap if no association would exist between them. The study was using cross-sectional data from the Västerbotten Environmental Health Study in Sweden; a large questionnaire-based survey. 8520 adults (18-79 years) were randomly selected after stratification for age and sex, of whom 3406 (40%) participated. Individuals with the four types of intolerance were identified either through self-report, or by having been physician-diagnosed with a specific EI. The overlaps between the four EIs were greater than predictions based on coincidence for both self-reported and diagnosed cases (except for the overlap between diagnosed intolerance to sounds and EMFs). The results raise the question whether different types of EI share similar underlying mechanisms, or at least that the sufferers of EI share some predisposition to acquire the conditions. PMID:24029726

  20. A Bayesian variable selection procedure to rank overlapping gene sets

    PubMed Central

    2012-01-01

    Background Genome-wide expression profiling using microarrays or sequence-based technologies allows us to identify genes and genetic pathways whose expression patterns influence complex traits. Different methods to prioritize gene sets, such as the genes in a given molecular pathway, have been described. In many cases, these methods test one gene set at a time, and therefore do not consider overlaps among the pathways. Here, we present a Bayesian variable selection method to prioritize gene sets that overcomes this limitation by considering all gene sets simultaneously. We applied Bayesian variable selection to differential expression to prioritize the molecular and genetic pathways involved in the responses to Escherichia coli infection in Danish Holstein cows. Results We used a Bayesian variable selection method to prioritize Kyoto Encyclopedia of Genes and Genomes pathways. We used our data to study how the variable selection method was affected by overlaps among the pathways. In addition, we compared our approach to another that ignores the overlaps, and studied the differences in the prioritization. The variable selection method was robust to a change in prior probability and stable given a limited number of observations. Conclusions Bayesian variable selection is a useful way to prioritize gene sets while considering their overlaps. Ignoring the overlaps gives different and possibly misleading results. Additional procedures may be needed in cases of highly overlapping pathways that are hard to prioritize. PMID:22554182

  1. Pulsed hydrojet

    DOEpatents

    Bohachevsky, I.O.; Torrey, M.D.

    1986-06-10

    An underwater pulsed hydrojet propulsion system is provided for accelerating and propelling a projectile or other vessel. A reactant, such as lithium, is fluidized and injected into a water volume. The resulting reaction produces an energy density in a time effective to form a steam pocket. Thrust flaps or baffles direct the pressure from the steam pocket toward an exit nozzle for accelerating a water volume to create thrust. A control system regulates the dispersion of reactant to control thrust characteristics.

  2. Pulse transmission transceiver architecture for low power communications

    DOEpatents

    Dress, Jr., William B.; Smith, Stephen F.

    2003-08-05

    Systems and methods for pulse-transmission low-power communication modes are disclosed. A method of pulse transmission communications includes: generating a modulated pulse signal waveform; transforming said modulated pulse signal waveform into at least one higher-order derivative waveform; and transmitting said at least one higher-order derivative waveform as an emitted pulse. The systems and methods significantly reduce lower-frequency emissions from pulse transmission spread-spectrum communication modes, which reduces potentially harmful interference to existing radio frequency services and users and also simultaneously permit transmission of multiple data bits by utilizing specific pulse shapes.

  3. The Pulse Line Ion Accelerator Concept

    SciTech Connect

    Briggs, Richard J.

    2006-02-15

    The Pulse Line Ion Accelerator concept was motivated by the desire for an inexpensive way to accelerate intense short pulse heavy ion beams to regimes of interest for studies of High Energy Density Physics and Warm Dense Matter. A pulse power driver applied at one end of a helical pulse line creates a traveling wave pulse that accelerates and axially confines the heavy ion beam pulse. Acceleration scenarios with constant parameter helical lines are described which result in output energies of a single stage much larger than the several hundred kilovolt peak voltages on the line, with a goal of 3-5 MeV/meter acceleration gradients. The concept might be described crudely as an ''air core'' induction linac where the PFN is integrated into the beam line so the accelerating voltage pulse can move along with the ions to get voltage multiplication.

  4. Controlled electron injection into laser wakefields with a perpendicular injection laser pulse

    SciTech Connect

    Wang, W.-M.; Sheng, Z.-M.; Zhang, J.

    2008-11-17

    Electron injection into laser wakefields for acceleration by two orthogonally directed laser pulses is investigated theoretically. It is found that efficient injection occurs provided the two pulses are collinearly polarized, even if the injection pulse is much weaker than the pump pulse driving wakefields. Compared with the head-on colliding injection geometry, this scheme allows for a shorter propagation distance less than a Rayleigh length for the injection pulse, before its overlapping with the pump pulse. Moreover, it can generate electron beams stably with comparable low energy spread and emittance, as demonstrated by particle-in-cell simulations. The optimization of laser parameters is also investigated.

  5. Plasma Membrane Permeabilization by Trains of Ultrashort Electric Pulses

    PubMed Central

    Ibey, Bennett L.; Mixon, Dustin G.; Payne, Jason A.; Bowman, Angela; Sickendick, Karl; Wilmink, Gerald J.; Roach, W. Patrick; Pakhomov, Andrei G.

    2010-01-01

    Ultrashort electric pulses (USEP) cause long-lasting increase of cell membrane electrical conductance, and that a single USEP increased cell membrane electrical conductance proportionally to the absorbed dose (AD) with a threshold of about 10 mJ/g. The present study extends quantification of the membrane permeabilization effect to multiple USEP and employed a more accurate protocol that identified USEP effect as the difference between post- and pre-exposure conductance values (Δg) in individual cells. We showed that Δg can be increased by either increasing the number of pulses at a constant E-field, or by increasing the E-field at a constant number of pulses. For 60-ns pulses, an E-field threshold of 6 kV/cm for a single pulse was lowered to less than 1.7 kV/cm by applying 100-pulse or longer trains. However, the reduction of the E-field threshold was only achieved at the expense of a higher AD compared to a single pulse exposure. Furthermore, the effect of multiple pulses was not fully determined by AD, suggesting that cells permeabilized by the first pulse(s) in the train become less vulnerable to subsequent pulses. This explanation was corroborated by a model that treated multiple-pulse exposures as a series of single-pulse exposures and assumed an exponential decline of cell susceptibility to USEP as Δg increased after each pulse during the course of the train. PMID:20171148

  6. Presentation of dynamically overlapping auditory messages in user interfaces

    SciTech Connect

    Papp, A.L.

    1997-09-01

    This dissertation describes a methodology and example implementation for the dynamic regulation of temporally overlapping auditory messages in computer-user interfaces. The regulation mechanism exists to schedule numerous overlapping auditory messages in such a way that each individual message remains perceptually distinct from all others. The method is based on the research conducted in the area of auditory scene analysis. While numerous applications have been engineered to present the user with temporally overlapped auditory output, they have generally been designed without any structured method of controlling the perceptual aspects of the sound. The method of scheduling temporally overlapping sounds has been extended to function in an environment where numerous applications can present sound independently of each other. The Centralized Audio Presentation System is a global regulation mechanism that controls all audio output requests made from all currently running applications. The notion of multimodal objects is explored in this system as well. Each audio request that represents a particular message can include numerous auditory representations, such as musical motives and voice. The Presentation System scheduling algorithm selects the best representation according to the current global auditory system state, and presents it to the user within the request constraints of priority and maximum acceptable latency. The perceptual conflicts between temporally overlapping audio messages are examined in depth through the Computational Auditory Scene Synthesizer. At the heart of this system is a heuristic-based auditory scene synthesis scheduling method. Different schedules of overlapped sounds are evaluated and assigned penalty scores. High scores represent presentations that include perceptual conflicts between over-lapping sounds. Low scores indicate fewer and less serious conflicts. A user study was conducted to validate that the perceptual difficulties predicted by

  7. Propagation of an ultrashort, intense laser pulse in a relativistic plasma

    SciTech Connect

    Ritchie, B.; Decker, C.D.

    1997-12-31

    A Maxwell-relativistic fluid model is developed for the propagation of an ultrashort, intense laser pulse through an underdense plasma. The separability of plasma and optical frequencies ({omega}{sub p} and {omega} respectively) for small {omega}{sub p}/{omega} is not assumed; thus the validity of multiple-scales theory (MST) can be tested. The theory is valid when {omega}{sub p}/{omega} is of order unity or for cases in which {omega}{sub p}/{omega} {much_lt} 1 but strongly relativistic motion causes higher-order plasma harmonics to be generated which overlap the region of the first-order laser harmonic, such that MST would not expected to be valid although its principal validity criterion {omega}{sub p}/{omega} {much_lt} 1 holds.

  8. Stochastic Ion Heating from Many Overlapping Laser Beams in Fusion Plasmas

    NASA Astrophysics Data System (ADS)

    Michel, P.; Rozmus, W.; Williams, E. A.; Divol, L.; Berger, R. L.; Town, R. P. J.; Glenzer, S. H.; Callahan, D. A.

    2012-11-01

    In this Letter, we show through numerical simulations and analytical results that overlapping multiple (N) laser beams in plasmas can lead to strong stochastic ion heating from many (∝N2) electrostatic perturbations driven by beat waves between pairs of laser beams. For conditions typical of inertial-confinement-fusion experiment conditions, hundreds of such beat waves are driven in mm3-scale plasmas, leading to ion heating rates of several keV/ns. This mechanism saturates cross-beam energy transfer, with a reduction of linear gains by a factor ˜4-5 and can strongly modify the overall hydrodynamics evolution of such laser-plasma systems.

  9. Stochastic ion heating from many overlapping laser beams in fusion plasmas.

    PubMed

    Michel, P; Rozmus, W; Williams, E A; Divol, L; Berger, R L; Town, R P J; Glenzer, S H; Callahan, D A

    2012-11-01

    In this Letter, we show through numerical simulations and analytical results that overlapping multiple (N) laser beams in plasmas can lead to strong stochastic ion heating from many (~N(2)) electrostatic perturbations driven by beat waves between pairs of laser beams. For conditions typical of inertial-confinement-fusion experiment conditions, hundreds of such beat waves are driven in mm(3)-scale plasmas, leading to ion heating rates of several keV/ns. This mechanism saturates cross-beam energy transfer, with a reduction of linear gains by a factor ~4-5 and can strongly modify the overall hydrodynamics evolution of such laser-plasma systems. PMID:23215392

  10. PULSE COLUMN

    DOEpatents

    Grimmett, E.S.

    1964-01-01

    This patent covers a continuous countercurrent liquidsolids contactor column having a number of contactor states each comprising a perforated plate, a layer of balls, and a downcomer tube; a liquid-pulsing piston; and a solids discharger formed of a conical section at the bottom of the column, and a tubular extension on the lowest downcomer terminating in the conical section. Between the conical section and the downcomer extension is formed a small annular opening, through which solids fall coming through the perforated plate of the lowest contactor stage. This annular opening is small enough that the pressure drop thereacross is greater than the pressure drop upward through the lowest contactor stage. (AEC)

  11. Multiple channel programmable coincidence counter

    DOEpatents

    Arnone, Gaetano J.

    1990-01-01

    A programmable digital coincidence counter having multiple channels and featuring minimal dead time. Neutron detectors supply electrical pulses to a synchronizing circuit which in turn inputs derandomized pulses to an adding circuit. A random access memory circuit connected as a programmable length shift register receives and shifts the sum of the pulses, and outputs to a serializer. A counter is input by the adding circuit and downcounted by the seralizer, one pulse at a time. The decoded contents of the counter after each decrement is output to scalers.

  12. Weld pool oscillation during pulsed GTA welding

    SciTech Connect

    Aendenroomer, A.J.R.; Ouden, G. den

    1996-12-31

    This paper deals with weld pool oscillation during pulsed GTA welding and with the possibility to use this oscillation for in-process control of weld penetration. Welding experiments were carried out under different welding conditions. During welding the weld pool was triggered into oscillation by the normal welding pulses or by extra current pulses. The oscillation frequency was measured both during the pulse time and during the base time by analyzing the arc voltage variation using a Fast Fourier Transformation program. Optimal results are obtained when full penetration occurs during the pulse time and partial penetration during the base time. Under these conditions elliptical overlapping spot welds are formed. In the case of full penetration the weld pool oscillates in a low frequency mode (membrane oscillation), whereas in the case of partial penetration the weld pool oscillates in a high frequency mode (surface oscillation). Deviation from the optimal welding conditions occurs when high frequency oscillation is observed during both pulse time and base time (underpenetration) or when low frequency oscillation is observed during both pulse time and base time (overpenetration). In line with these results a penetration sensing system with feedback control was designed, based on the criterion that optimal weld penetration is achieved when two peaks are observed in the frequency distribution. The feasibility of this sensing system for orbital tube welding was confirmed by the results of experiments carried out under various welding conditions.

  13. Optical pulse synthesis using brillouin selective sideband amplification

    NASA Technical Reports Server (NTRS)

    Yao, X. Steve (Inventor)

    2002-01-01

    Techniques for producing optical pulses based on Brillouin selective sideband amplification by using a common modulation control signal to modulate both a signal beam to produce multiple sideband signals and a single pump beam to produce multiple pump beams.

  14. Increasing efficiency in intermediate band solar cells with overlapping absorptions

    NASA Astrophysics Data System (ADS)

    Krishna, Akshay; Krich, Jacob J.

    2016-07-01

    Intermediate band (IB) materials are promising candidates for realizing high efficiency solar cells. In IB photovoltaics, photons are absorbed in one of three possible electronic transitions—valence to conduction band, valence to intermediate band, or intermediate to conduction band. With fully concentrated sunlight, when the band gaps have been chosen appropriately, the highest efficiency IB solar cells require that these three absorptions be non-overlapping, so absorbed photons of fixed energy contribute to only one transition. The realistic case of overlapping absorptions, where the transitions compete for photons, is generally considered to be a source of loss. We show that overlapping absorptions can in fact lead to significant improvements in IB solar cell efficiencies, especially for IB that are near the middle of the band gap. At low to moderate concentration, the highest efficiency requires overlapping absorptions. We use the detailed-balance method and indicate how much overlap of the absorptions is required to achieve efficiency improvements, comparing with some known cases. These results substantially broaden the set of materials that can be suitable for high-efficiency IB solar cells.

  15. [Asthma-COPD overlap syndrome among patients with stable COPD].

    PubMed

    Nguyen, M-S; Nguyen Dang, D; Schleich, F; Manise, M; Corhay, J-L; Louis, R

    2015-01-01

    The purpose of this research was to describe the frequency and characteristics of the overlap syndrome among stable COPD patients (stage 2 to 4 according to GOLD). Material and method: We studied 46 patients with stable COPD recruited from the outpatient clinic of the CHU of Liege from May 2013 to April 2014. Definition of the overlap syndrome was based on the coexistence of post-bronchodilation FEV1/FVC < 70% and, either, an asthmatic history before the age of 40, or, at least, two functional and immune-inflammatory asthmatic traits : 1) significant FEV1 reversibility to inhaled bronchodilator (FEVI change >/= 200 ml and >/= 12% after bronchodilation), 2) eosinophilic inflammation : sputum eosinophils ≥ 3%,blood eosinophils ≥ 400/μl, or FENO ≥ 45 ppb, 3) clinical history of airway allergy, or total serum IgE ≥ 113 KU/l, or RAST ≥ 0,35 KU/l against major aeroallergens. 37% patients had the COPD-asthma overlap syndrome and this group had a higher CAT score reflecting more severe symptoms (24,6 ± 8,1 vs 19,4 ± 8, p < 0,05) despite similar level of airway obstruction. The transfer coefficient DLCO/VA was preserved in the overlap group (97 ± 24%), but altered in the pure COPD group (80 ± 20%), p < 0,05. Approximately one third of COPD patients present with the overlap syndrome and they are more symptomatic without any evidence of more severe airway obstruction. PMID:25902605

  16. Crosstalk analysis of pathways in breast cancer using a network model based on overlapping differentially expressed genes

    PubMed Central

    SUN, YONG; YUAN, KAI; ZHANG, PENG; MA, RONG; ZHANG, QI-WEN; TIAN, XING-SONG

    2015-01-01

    Multiple signal transduction pathways can affect each other considerably through crosstalk. However, the presence and extent of this phenomenon have not been rigorously studied. The aim of the present study was to identify strong and normal interactions between pathways in breast cancer and determine the main pathway. Five sets of breast cancer data were downloaded from the high-throughput Gene Expression Omnibus (GEO) and analyzed to identify differentially expressed (DE) genes using the Rank Product (RankProd) method. A list of pathways with differential expression was obtained by gene set enrichment analysis (GSEA) of the Kyoto Encyclopedia of Genes and Genomes (KEGG) database. The DE genes that overlapped between pathways were identified and a crosstalk network diagram based on the overlap of DE genes was constructed. A total of 1,464 DE genes and 26 pathways were identified. In addition, the number of DE genes that overlapped between specific pathways were determined, and the greatest degree of overlap was between the extracellular matrix (ECM)-receptor interaction and Focal adhesion pathways, which had 22 overlapping DE genes. Weighted pathway analysis of the crosstalk between pathways identified that Pathways in cancer was the main pathway in breast cancer. PMID:26622386

  17. One-pot DNA construction for synthetic biology: the Modular Overlap-Directed Assembly with Linkers (MODAL) strategy.

    PubMed

    Casini, Arturo; MacDonald, James T; De Jonghe, Joachim; Christodoulou, Georgia; Freemont, Paul S; Baldwin, Geoff S; Ellis, Tom

    2014-01-01

    Overlap-directed DNA assembly methods allow multiple DNA parts to be assembled together in one reaction. These methods, which rely on sequence homology between the ends of DNA parts, have become widely adopted in synthetic biology, despite being incompatible with a key principle of engineering: modularity. To answer this, we present MODAL: a Modular Overlap-Directed Assembly with Linkers strategy that brings modularity to overlap-directed methods, allowing assembly of an initial set of DNA parts into a variety of arrangements in one-pot reactions. MODAL is accompanied by a custom software tool that designs overlap linkers to guide assembly, allowing parts to be assembled in any specified order and orientation. The in silico design of synthetic orthogonal overlapping junctions allows for much greater efficiency in DNA assembly for a variety of different methods compared with using non-designed sequence. In tests with three different assembly technologies, the MODAL strategy gives assembly of both yeast and bacterial plasmids, composed of up to five DNA parts in the kilobase range with efficiencies of between 75 and 100%. It also seamlessly allows mutagenesis to be performed on any specified DNA parts during the process, allowing the one-step creation of construct libraries valuable for synthetic biology applications. PMID:24153110

  18. Tapered pulse tube for pulse tube refrigerators

    DOEpatents

    Swift, Gregory W.; Olson, Jeffrey R.

    1999-01-01

    Thermal insulation of the pulse tube in a pulse-tube refrigerator is maintained by optimally varying the radius of the pulse tube to suppress convective heat loss from mass flux streaming in the pulse tube. A simple cone with an optimum taper angle will often provide sufficient improvement. Alternatively, the pulse tube radius r as a function of axial position x can be shaped with r(x) such that streaming is optimally suppressed at each x.

  19. A Bayesian Approach to the Overlap Analysis of Epidemiologically Linked Traits

    PubMed Central

    Panoutsopoulou, Kalliope; Wheeler, Eleanor; Berndt, Sonja I.; Cordell, Heather J.; Morris, Andrew P.; Zeggini, Eleftheria; Barroso, Inês

    2015-01-01

    ABSTRACT Diseases often cooccur in individuals more often than expected by chance, and may be explained by shared underlying genetic etiology. A common approach to genetic overlap analyses is to use summary genome‐wide association study data to identify single‐nucleotide polymorphisms (SNPs) that are associated with multiple traits at a selected P‐value threshold. However, P‐values do not account for differences in power, whereas Bayes’ factors (BFs) do, and may be approximated using summary statistics. We use simulation studies to compare the power of frequentist and Bayesian approaches with overlap analyses, and to decide on appropriate thresholds for comparison between the two methods. It is empirically illustrated that BFs have the advantage over P‐values of a decreasing type I error rate as study size increases for single‐disease associations. Consequently, the overlap analysis of traits from different‐sized studies encounters issues in fair P‐value threshold selection, whereas BFs are adjusted automatically. Extensive simulations show that Bayesian overlap analyses tend to have higher power than those that assess association strength with P‐values, particularly in low‐power scenarios. Calibration tables between BFs and P‐values are provided for a range of sample sizes, as well as an approximation approach for sample sizes that are not in the calibration table. Although P‐values are sometimes thought more intuitive, these tables assist in removing the opaqueness of Bayesian thresholds and may also be used in the selection of a BF threshold to meet a certain type I error rate. An application of our methods is used to identify variants associated with both obesity and osteoarthritis. PMID:26411566

  20. Multi-pulsed white light sintering of printed Cu nanoinks

    NASA Astrophysics Data System (ADS)

    Han, Won-Suk; Hong, Jae-Min; Kim, Hak-Sung; Song, Yong-Won

    2011-09-01

    Pulse management of white light to maximize the sintering efficiency of a rapid (msec) and substrate-protective method, intense pulsed light (IPL), was studied systematically with a printable Cu nanoink. An excessive pulse energy that induces deleterious defects on the Cu film along with damage on a plastic substrate was dissipated into multiple sub-pulses while maintaining a total energy budget over the threshold level for successful Cu sintering. Electrical properties of the metal layers were analyzed in conjunction with pulse formation factors such as average energy, pulse duration, peak power and pulse number to determine their respective effects on IPL sintering. In the quantitative results, the optimized sintering conditions of copper nanoparticles with a mean diameter of 30 nm and a fixed total irradiated pulse energy of 32 J cm - 2 were a pulse number and pulse width of > 4 and < 3 msec, respectively.

  1. Climate-induced range overlap among closely related species

    NASA Astrophysics Data System (ADS)

    Krosby, Meade; Wilsey, Chad B.; McGuire, Jenny L.; Duggan, Jennifer M.; Nogeire, Theresa M.; Heinrichs, Julie A.; Tewksbury, Joshua J.; Lawler, Joshua J.

    2015-09-01

    Contemporary climate change is causing large shifts in biotic distributions, which has the potential to bring previously isolated, closely related species into contact. This has led to concern that hybridization and competition could threaten species persistence. Here, we use bioclimatic models to show that future range overlap by the end of the century is predicted for only 6.4% of isolated, congeneric species pairs of New World birds, mammals and amphibians. Projected rates of climate-induced overlap are higher for birds (11.6%) than for mammals (4.4%) or amphibians (3.6%). As many species will have difficulty tracking shifting climates, actual rates of future overlap are likely to be far lower, suggesting that hybridization and competition impacts may be relatively modest.

  2. Evaluation of overlaps between arbitrary fermionic quasiparticle vacua

    NASA Astrophysics Data System (ADS)

    Avez, B.; Bender, M.

    2012-03-01

    We derive an expression that allows for the unambiguous evaluation of the overlap between two arbitrary quasiparticle vacua, including its sign. Our expression is based on the Pfaffian of a skew-symmetric matrix, extending the overlap formula recently proposed by Robledo [Phys. Rev. CPRVCAN0556-281310.1103/PhysRevC.79.021302 79, 021302(R) (2009)] to the most general case of quasiparticle vacua, including the one of the overlap between two different blocked n-quasiparticle states for either even or odd systems. The powerfulness of the method is illustrated for a few typical matrix elements that appear in realistic angular-momentum-restored generator coordinate method calculations when breaking time-reversal invariance and using the full model space of occupied single-particle states.

  3. Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps

    NASA Astrophysics Data System (ADS)

    Uricaru, Raluca; Mancheron, Alban; Rivals, Eric

    Chaining fragments is a crucial step in genome alignment. Existing chaining algorithms compute a maximum weighted chain with no overlaps allowed between adjacent fragments. In practice, using local alignments as fragments, instead of MEMs, generates frequent overlaps between fragments, due to combinatorial reasons and biological factors, i.e. variable tandem repeat structures that differ in number of copies between genomic sequences. In this paper, in order to raise this limitation, we formulate a novel definition of a chain, allowing overlaps proportional to the fragments lengths, and exhibit an efficient algorithm for computing such a maximum weighted chain. We tested our algorithm on a dataset composed of 694 genome couples and accounted for significant improvements in terms of coverage, while keeping the running times below reasonable limits.

  4. Finding overlapping communities in networks by label propagation

    NASA Astrophysics Data System (ADS)

    Gregory, Steve

    2010-10-01

    We propose an algorithm for finding overlapping community structure in very large networks. The algorithm is based on the label propagation technique of Raghavan, Albert and Kumara, but is able to detect communities that overlap. Like the original algorithm, vertices have labels that propagate between neighbouring vertices so that members of a community reach a consensus on their community membership. Our main contribution is to extend the label and propagation step to include information about more than one community: each vertex can now belong to up to v communities, where v is the parameter of the algorithm. Our algorithm can also handle weighted and bipartite networks. Tests on an independently designed set of benchmarks, and on real networks, show the algorithm to be highly effective in recovering overlapping communities. It is also very fast and can process very large and dense networks in a short time.

  5. Overlap Functions for Measures in Conformal Iterated Function Systems

    NASA Astrophysics Data System (ADS)

    Mihailescu, Eugen; Urbański, Mariusz

    2016-01-01

    We employ thermodynamic formalism for the study of conformal iterated function systems (IFS) S = {φ _i}_{i in I} with arbitrary overlaps, and of measures μ on limit sets Λ , which are projections of equilibrium measures hat{μ } with respect to a certain lift map Φ on Σ _I^+ × Λ . No type of Open Set Condition is assumed. We introduce a notion of overlap function and overlap number for such a measure hat{μ } with respect to S; and, in particular a notion of (topological) overlap number o(S). These notions take in consideration the n-chains between points in the limit set. We prove that o(S, hat{μ }) is related to a conditional entropy of hat{μ } with respect to the lift Φ . Various types of projections to Λ of invariant measures are studied. We obtain upper estimates for the Hausdorff dimension HD(μ ) of μ on Λ , by using pressure functions and o(S, hat{μ }). In particular, this applies to projections of Bernoulli measures on Σ _I^+. Next, we apply the results to Bernoulli convolutions ν _λ for λ in (1/2, 1), which correspond to self-similar measures determined by composing, with equal probabilities, the contractions of an IFS with overlaps S_λ . We prove that for all λ in (1/2, 1), there exists a relation between HD(ν _λ ) and the overlap number o(S_λ ). We also estimate o(S_λ ) for certain values of λ.

  6. Overlaps among phenological phases in flood plain forest ecosystem

    NASA Astrophysics Data System (ADS)

    Bartošová, Lenka; Bauer, Zdeněk; Trnka, Miroslav; Možný, Martin; Štěpánek, Petr; Žalud, Zdeněk

    2015-04-01

    There is a growing concern that climate change has significant impacts on species phenology, seasonal population dynamics, and thus interaction (a)synchrony between species. Species that have historically undergone life history events on the same seasonal calendar may lose synchrony and therefore lose the ability to interact as they have in the past. In view of the match/mismatch hypothesis, the different extents or directions of the phenological shifts among interacting species may have significant implications for community structure and dynamics. That's why our principal goal of the study is to determine the phenological responses within the ecosystem of flood plain forest and analyzed the phenological overlapping among each phenological periods of given species. The phenological observations were done at flood-plain forest experimental site during the period 1961-2012. The whole ecosystem in this study create 17 species (15 plants and 2 bird species) and each species is composed of 2 phenological phases. Phenological periods of all species of ecosystem overlap each other and 43 of these overlapping were chosen and the length, trend and correlation with temperature were elaborated. The analysis of phenophases overlapping of chosen species showed that the length of overlay is getting significantly shorter in 1 case. On the other hand the situation when the length of overlaps is getting significantly longer arose in 4 cases. Remaining overlaps (38) of all phenological periods among various species is getting shorter or longer but with no significance or have not changed anyhow. This study was funded by project "Building up a multidisciplinary scientific team focused on drought" No. CZ.1.07/2.3.00/20.0248. and of projects no. LD13030 supporting participation of the Czech Republic in the COST action ES1106.

  7. EFFICIENCY OF CONCRETE REMOVAL WITH A PULSED ND:YAG LASER

    EPA Science Inventory

    The mechanism and efficiency of ablating concrete surfaces with a pulsed Nd:YAG laser were studied. Ablation efficiency and material removal rates were determined as functions of irradiance and pulse overlap. The ablation mechanism was dominated by fragmentation and disaggregatio...

  8. Effect of overlap and overscan number in laser surface texturing of medical needles

    NASA Astrophysics Data System (ADS)

    Wang, Xingsheng; Xing, Youqiang; Giovannini, Marco

    2015-07-01

    Micro-features are frequently created on medical needles to improve the visibility and friction behavior in ultrasound-guided percutaneous procedures. Ultra-short pulsed laser ablation is the front runner among the current material micro-processing technologies. In this paper, the effect of process parameters in laser surface texturing (LST) of medical needles was studied by experiments based on Taguchi methodology. The evolution of ablation dimension and surface roughness with different process parameters was measured by optical microscope. Based on response surface regression, mathematical models for correlating the machined depth and surface roughness with the overlap and overscan number were developed. Analysis of variance (ANOVA) was carried out to access the adequacy of the developed mathematical models. The results indicate that the developed mathematical models can predict the machined depth and surface roughness during LST operation satisfactorily. Analyses were made to study the effect of the process parameters on the machined micro-channel. From the analysis, it was found that the overlap and overscan number have great influences on the machined depth and surface roughness.

  9. Charmonium Spectrum from Quenched QCD with Overlap Fermions

    SciTech Connect

    S. Tamhankar; A. Alexandru; Y. Chen; S.J. Dong; T. Draper; I. Horvath; F.X. Lee; K.F. Liu; N. Mathur; J.B. Zhang

    2005-07-20

    We present the first study of the charmonium spectrum using overlap fermions, on quenched configurations. Simulations are performed on 16{sup 3} x 72 lattices, with Wilson gauge action at {beta} = 6.3345. We demonstrate that we have discretization errors under control at about 5%. We obtain 88(4) MeV for hyperfine splitting using the {sub 0} scale, and 121(6) MeV using the (1{bar P}-1{bar S}) scale. This paper raises the possibility that the discrepancy between the lattice results and the experimental value for charmonium hyperfine splitting can be resolved using overlap fermions to simulate the charm quark on lattice.

  10. Overlapping illusions by transformation optics without any negative refraction material

    PubMed Central

    Sun, Fei; He, Sailing

    2016-01-01

    A novel method to achieve an overlapping illusion without any negative refraction index material is introduced with the help of the optic-null medium (ONM) designed by an extremely stretching spatial transformation. Unlike the previous methods to achieve such an optical illusion by transformation optics (TO), our method can achieve a power combination and reshape the radiation pattern at the same time. Unlike the overlapping illusion with some negative refraction index material, our method is not sensitive to the loss of the materials. Other advantages over existing methods are discussed. Numerical simulations are given to verify the performance of the proposed devices. PMID:26751285

  11. Verification of overlap and fringing capacitance models for MOSFETs

    NASA Astrophysics Data System (ADS)

    Wakita, Naoki; Shigyo, Naoyuki

    2000-06-01

    Parasitic capacitance and resistance limit the VLSI device performance. Hence, a circuit model is needed to treat these effects correctly. This article focuses on the circuit models for the overlap capacitance ( Cgd,overlap) and the fringing capacitance ( Cgd,fringe) of MOSFETs. Comparisons between the models and the device simulations are carried out for verification of the models. Also, a limitation of Cgd,fringe model for a future device miniaturization is found based on SIA Road Map. We propose a modified Cgd,fringe model. The effectiveness of the modified model is demonstrated using two circuits.

  12. Segmental overlap: foot drop in S1 radiculopathy.

    PubMed

    Voermans, N C; Koetsveld, A C; Zwarts, M J

    2006-07-01

    Knowledge of segmental innervation of skeletal muscles is essential for diagnosing lumbar radiculopathy. Myotomes and dermatomes are traditionally thought to be innervated by a single spinal segment, but experimental studies have shown that this pattern of segmental innervation allows considerable overlap. This implies that muscles (or dermatomes) are innervated not only by axons of one spinal segment, but also partially by axons of adjacent spinal levels. We describe a patient in whom overlap in segmental innervation complicated adequate diagnosis of a recurrent lumbar hernia. Further, we present an outline of electrophysiological and anatomical studies on segmental innervation. PMID:16523224

  13. Detecting consistency of overlapping quantum marginals by separability

    NASA Astrophysics Data System (ADS)

    Chen, Jianxin; Ji, Zhengfeng; Yu, Nengkun; Zeng, Bei

    2016-03-01

    The quantum marginal problem asks whether a set of given density matrices are consistent, i.e., whether they can be the reduced density matrices of a global quantum state. Not many nontrivial analytic necessary (or sufficient) conditions are known for the problem in general. We propose a method to detect consistency of overlapping quantum marginals by considering the separability of some derived states. Our method works well for the k -symmetric extension problem in general and for the general overlapping marginal problems in some cases. Our work is, in some sense, the converse to the well-known k -symmetric extension criterion for separability.

  14. The complexity of the overlap method for sequencing biopolymers.

    PubMed

    Gallant, J K

    1983-03-01

    The problem of trying to reconstruct the sequence of a biopolymer by using overlapping fragments obtained from cleaving agents is shown to be computationally intractable. This strongly suggests that any computer program for overlap sequencing, even though it may work well for a limited number of inputs, will not work sufficiently for all inputs. However, if the problem is restricted so that certain crucial fragments are known, called prime strings, a sequence can be found efficiently in all cases. Graph theory techniques for doing so can also be used to count the number of sequences consistent with the fragment data to determine whether a unique sequence has been obtained. PMID:6876820

  15. Rare Copy Number Variants in Tourette Syndrome Disrupt Genes in Histaminergic Pathways and Overlap with Autism

    PubMed Central

    Fernandez, Thomas V; Sanders, Stephan J; Yurkiewicz, Ilana R; Ercan-Sencicek, A. Gulhan; Kim, Young-Shin; Fishman, Daniel O; Raubeson, Melanie J; Song, Youeun; Yasuno, Katsuhito; Ho, Winson SC; Bilguvar, Kaya; Glessner, Joseph; Chu, Su Hee; Leckman, James F.; King, Robert A; Gilbert, Donald L; Heiman, Gary A; Tischfield, Jay A; Hoekstra, Pieter J; Devlin, Bernie; Hakonarson, Hakon; Mane, Shrikant M; Günel, Murat; State, Matthew W

    2012-01-01

    Background Studies of copy number variation (CNV) have successfully characterized loci and molecular pathways involved in a range of neuropsychiatric conditions. We conducted an analysis of rare CNVs in Tourette Syndrome (TS) to identify novel risk regions and relevant molecular pathways, evaluate the burden of structural variation in cases versus controls, and to assess the overlap of identified variations with those implicated in other neuropsychiatric syndromes. Methods We conducted a case-control study of 460 individuals with TS, including 148 parent-child trios and 1131 controls. CNV analysis was undertaken using 370K to 1M probe arrays, and genome-wide genotyping data was used to match cases and controls for ancestry. Transmitted and de novo CNVs present in < 1% of the population were evaluated. Results While there was no significant increase in the number of de novo or transmitted rare CNVs in cases versus controls, pathway analysis using multiple algorithms showed enrichment of genes within histamine receptor (H1R and H2R) signaling pathways (p=5.8×10-4-1.6×10-2) as well as “axon guidance”, “cell adhesion”, “nervous system development” and “synaptic structure and function” processes. Genes mapping within rare CNVs in TS showed significant overlap with those previously identified in autism spectrum disorders (ASD), but not intellectual disability or schizophrenia. Three large, likely-pathogenic, de novo events were identified, including one disrupting multiple gamma-Aminobutyric acid (GABA) receptor genes. Conclusions We identify further evidence supporting recent findings regarding the involvement of histaminergic and GABAergic mechanisms in the etiology of TS and show an overlap of rare CNVs in TS and ASD. PMID:22169095

  16. Thermoluminescence measurement technique using millisecond temperature pulses.

    PubMed

    Manfred, Michael E; Gabriel, Nicholas T; Yukihara, Eduardo G; Talghader, Joseph J

    2010-06-01

    A measurement technique, pulsed thermoluminescence, is described which uses short thermal pulses to excite trapped carriers leading to radiative recombination. The pulses are obtained using microstructures with approximately 500 micros thermal time constants. The technique has many of the advantages of pulsed optically stimulated luminescence without the need for optical sources and filters to isolate the luminescent signal. Charge carrier traps in alpha-Al(2)O(3):C particles on microheaters were filled using 205 nm light. Temperature pulses of 10 and 50 ms were applied to the heaters and compared with a standard thermoluminescence curve taken at a ramp rate of 5 K s(-1). This produced curves of intensity verses temperature similar to standard thermoluminescence except shifted to higher temperatures. The luminescence of single particles was read multiple times with negligible loss of population. The lower limit of the duration of useful pulses appears to be limited by particle size and thermal contact between the particle and heater. PMID:20522565

  17. Assessing the likely effectiveness of multispecies management for imperiled desert fishes with niche overlap analysis.

    PubMed

    Laub, Brian G; Budy, Phaedra

    2015-08-01

    A critical decision in species conservation is whether to target individual species or a complex of ecologically similar species. Management of multispecies complexes is likely to be most effective when species share similar distributions, threats, and response to threats. We used niche overlap analysis to assess ecological similarity of 3 sensitive desert fish species currently managed as an ecological complex. We measured the amount of shared distribution of multiple habitat and life history parameters between each pair of species. Habitat use and multiple life history parameters, including maximum body length, spawning temperature, and longevity, differed significantly among the 3 species. The differences in habitat use and life history parameters among the species suggest they are likely to respond differently to similar threats and that most management actions will not benefit all 3 species equally. Habitat restoration, frequency of stream dewatering, non-native species control, and management efforts in tributaries versus main stem rivers are all likely to impact each of the species differently. Our results demonstrate that niche overlap analysis provides a powerful tool for assessing the likely effectiveness of multispecies versus single-species conservation plans. PMID:25627117

  18. Community Structure Detection for Overlapping Modules through Mathematical Programming in Protein Interaction Networks

    PubMed Central

    Bennett, Laura; Kittas, Aristotelis; Liu, Songsong; Papageorgiou, Lazaros G.; Tsoka, Sophia

    2014-01-01

    Community structure detection has proven to be important in revealing the underlying properties of complex networks. The standard problem, where a partition of disjoint communities is sought, has been continually adapted to offer more realistic models of interactions in these systems. Here, a two-step procedure is outlined for exploring the concept of overlapping communities. First, a hard partition is detected by employing existing methodologies. We then propose a novel mixed integer non linear programming (MINLP) model, known as OverMod, which transforms disjoint communities to overlapping. The procedure is evaluated through its application to protein-protein interaction (PPI) networks of the rat, E. coli, yeast and human organisms. Connector nodes of hard partitions exhibit topological and functional properties indicative of their suitability as candidates for multiple module membership. OverMod identifies two types of connector nodes, inter and intra-connector, each with their own particular characteristics pertaining to their topological and functional role in the organisation of the network. Inter-connector proteins are shown to be highly conserved proteins participating in pathways that control essential cellular processes, such as proliferation, differentiation and apoptosis and their differences with intra-connectors is highlighted. Many of these proteins are shown to possess multiple roles of distinct nature through their participation in different network modules, setting them apart from proteins that are simply ‘hubs’, i.e. proteins with many interaction partners but with a more specific biochemical role. PMID:25412367

  19. Community structure detection for overlapping modules through mathematical programming in protein interaction networks.

    PubMed

    Bennett, Laura; Kittas, Aristotelis; Liu, Songsong; Papageorgiou, Lazaros G; Tsoka, Sophia

    2014-01-01

    Community structure detection has proven to be important in revealing the underlying properties of complex networks. The standard problem, where a partition of disjoint communities is sought, has been continually adapted to offer more realistic models of interactions in these systems. Here, a two-step procedure is outlined for exploring the concept of overlapping communities. First, a hard partition is detected by employing existing methodologies. We then propose a novel mixed integer non linear programming (MINLP) model, known as OverMod, which transforms disjoint communities to overlapping. The procedure is evaluated through its application to protein-protein interaction (PPI) networks of the rat, E. coli, yeast and human organisms. Connector nodes of hard partitions exhibit topological and functional properties indicative of their suitability as candidates for multiple module membership. OverMod identifies two types of connector nodes, inter and intra-connector, each with their own particular characteristics pertaining to their topological and functional role in the organisation of the network. Inter-connector proteins are shown to be highly conserved proteins participating in pathways that control essential cellular processes, such as proliferation, differentiation and apoptosis and their differences with intra-connectors is highlighted. Many of these proteins are shown to possess multiple roles of distinct nature through their participation in different network modules, setting them apart from proteins that are simply 'hubs', i.e. proteins with many interaction partners but with a more specific biochemical role. PMID:25412367

  20. Assessing the likely effectiveness of multispecies management for imperiled desert fishes with niche overlap analysis

    USGS Publications Warehouse

    Laub, P; Budy, Phaedra

    2015-01-01

    A critical decision in species conservation is whether to target individual species or a complex of ecologically similar species. Management of multispecies complexes is likely to be most effective when species share similar distributions, threats, and response to threats. We used niche overlap analysis to assess ecological similarity of 3 sensitive desert fish species currently managed as an ecological complex. We measured the amount of shared distribution of multiple habitat and life history parameters between each pair of species. Habitat use and multiple life history parameters, including maximum body length, spawning temperature, and longevity, differed significantly among the 3 species. The differences in habitat use and life history parameters among the species suggest they are likely to respond differently to similar threats and that most management actions will not benefit all 3 species equally. Habitat restoration, frequency of stream dewatering, non-native species control, and management efforts in tributaries versus main stem rivers are all likely to impact each of the species differently. Our results demonstrate that niche overlap analysis provides a powerful tool for assessing the likely effectiveness of multispecies versus single-species conservation plans.

  1. GPU simulation of nonlinear propagation of dual band ultrasound pulse complexes

    NASA Astrophysics Data System (ADS)

    Kvam, Johannes; Angelsen, Bjørn A. J.; Elster, Anne C.

    2015-10-01

    In a new method of ultrasound imaging, called SURF imaging, dual band pulse complexes composed of overlapping low frequency (LF) and high frequency (HF) pulses are transmitted, where the frequency ratio LF:HF ˜ 1 : 20, and the relative bandwidth of both pulses are ˜ 50 - 70%. The LF pulse length is hence ˜ 20 times the HF pulse length. The LF pulse is used to nonlinearly manipulate the material elasticity observed by the co-propagating HF pulse. This produces nonlinear interaction effects that give more information on the propagation of the pulse complex. Due to the large difference in frequency and pulse length between the LF and the HF pulses, we have developed a dual level simulation where the LF pulse propagation is first simulated independent of the HF pulse, using a temporal sampling frequency matched to the LF pulse. A separate equation for the HF pulse is developed, where the the presimulated LF pulse modifies the propagation velocity. The equations are adapted to parallel processing in a GPU, where nonlinear simulations of a typical HF beam of 10 MHz down to 40 mm is done in ˜ 2 secs in a standard GPU. This simulation is hence very useful for studying the manipulation effect of the LF pulse on the HF pulse.

  2. GPU simulation of nonlinear propagation of dual band ultrasound pulse complexes

    SciTech Connect

    Kvam, Johannes Angelsen, Bjørn A. J.; Elster, Anne C.

    2015-10-28

    In a new method of ultrasound imaging, called SURF imaging, dual band pulse complexes composed of overlapping low frequency (LF) and high frequency (HF) pulses are transmitted, where the frequency ratio LF:HF ∼ 1 : 20, and the relative bandwidth of both pulses are ∼ 50 − 70%. The LF pulse length is hence ∼ 20 times the HF pulse length. The LF pulse is used to nonlinearly manipulate the material elasticity observed by the co-propagating HF pulse. This produces nonlinear interaction effects that give more information on the propagation of the pulse complex. Due to the large difference in frequency and pulse length between the LF and the HF pulses, we have developed a dual level simulation where the LF pulse propagation is first simulated independent of the HF pulse, using a temporal sampling frequency matched to the LF pulse. A separate equation for the HF pulse is developed, where the the presimulated LF pulse modifies the propagation velocity. The equations are adapted to parallel processing in a GPU, where nonlinear simulations of a typical HF beam of 10 MHz down to 40 mm is done in ∼ 2 secs in a standard GPU. This simulation is hence very useful for studying the manipulation effect of the LF pulse on the HF pulse.

  3. Spatiotemporal control of degenerate multiphoton fluorescence microscopy with delay-tunable femtosecond pulse pairs

    NASA Astrophysics Data System (ADS)

    Das, Dhiman; Bhattacharyya, Indrajit; Goswami, Debabrata

    2016-07-01

    Selective excitation of a particular fluorophore in an ensemble of different fluorophores with overlapping fluorescence spectra is shown to be dependent on the time delay of femtosecond pulse pairs in multiphoton fluorescence microscopy. In particular, the two-photon fluorescence behavior of the Texas Red and DAPI dye pair inside Bovine Pulmonary Artery Endothelial (BPAE) cells depends strongly on the center wavelength of the laser, as well as the delay between two identical laser pulses in one-color femtosecond pulse-pair excitation scheme. Thus, we present a novel design concept using pairs of femtosecond pulses at different central wavelengths and tunable pulse separations for controlling the image contrast between two spatially and spectrally overlapping fluorophores. This femtosecond pulse-pair technique is unique in utilizing the variation of dye dynamics inside biological cells as a contrast mode in microscopy of different fluorophores.

  4. ADRF experiments using near n.pi pulse strings. [Adiabatic Demagnetization due to Radio Frequency pulses

    NASA Technical Reports Server (NTRS)

    Rhim, W. K.; Burum, D. P.; Elleman, D. D.

    1977-01-01

    Adiabatic demagnetization (ADRF) can be achieved in a dipolar coupled nuclear spin system in solids by applying a string of short RF pulses and gradually modulating the pulse amplitudes or pulse angles. This letter reports an adiabatic inverse polarization effect in solids and a rotary spin echo phenomenon observed in liquids when the pulse angle is gradually changed across integral multiples of pi during a string of RF pulses. The RF pulse sequence used is illustrated along with the NMR signal from a CaF2 single crystal as observed between the RF pulses and the rotary spin echo signal observed in liquid C6F6 for n = 2. The observed effects are explained qualitatively on the basis of average Hamiltonian theory.

  5. 9 CFR 121.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... this section that have been genetically modified. (d) Overlap select agents or toxins that meet any of... OF AGRICULTURE VIRUSES, SERUMS, TOXINS, AND ANALOGOUS PRODUCTS; ORGANISMS AND VECTORS POSSESSION, USE...) Genetic elements, recombinant and/or synthetic nucleic acids, and recombinant and/or synthetic...

  6. 9 CFR 121.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... in paragraph (b) of this section that have been genetically modified. (d) Overlap select agents or... OF AGRICULTURE VIRUSES, SERUMS, TOXINS, AND ANALOGOUS PRODUCTS; ORGANISMS AND VECTORS POSSESSION, USE... elements, recombinant nucleic acids, and recombinant organisms: (1) Nucleic acids that can...

  7. 9 CFR 121.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... in paragraph (b) of this section that have been genetically modified. (d) Overlap select agents or... OF AGRICULTURE VIRUSES, SERUMS, TOXINS, AND ANALOGOUS PRODUCTS; ORGANISMS AND VECTORS POSSESSION, USE... elements, recombinant nucleic acids, and recombinant organisms: (1) Nucleic acids that can...

  8. 9 CFR 121.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... this section that have been genetically modified. (d) Overlap select agents or toxins that meet any of... OF AGRICULTURE VIRUSES, SERUMS, TOXINS, AND ANALOGOUS PRODUCTS; ORGANISMS AND VECTORS POSSESSION, USE...) Genetic elements, recombinant and/or synthetic nucleic acids, and recombinant and/or synthetic...

  9. A Longitudinal Assessment of the Victim-Offender Overlap

    ERIC Educational Resources Information Center

    Jennings, Wesley G.; Higgins, George E.; Tewksbury, Richard; Gover, Angela R.; Piquero, Alex R.

    2010-01-01

    Although research has established an offending/victimization overlap and that offenders and victims share similar characteristics, much less work has examined the longitudinal sequencing of victimization and offending in the same developmental period and whether key risk/protective factors significantly distinguish both offenders and victims. This…

  10. Peer Network Overlap in Twin, Sibling, and Friend Dyads

    ERIC Educational Resources Information Center

    McGuire, Shirley; Segal, Nancy L.

    2013-01-01

    Research suggests that sibling–peer connections are important for understanding adolescent problem behaviors. Using a novel behavioral genetic design, the current study investigated peer network overlap in 300 child–child pairs (aged 7-13 years) in 5 dyad types: monozygotic (MZ), dizygotic twins, full siblings (FSs), friend pairs, and virtual…

  11. 9 CFR 121.4 - Overlap select agents and toxins.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... elements, recombinant nucleic acids, and recombinant organisms: (1) Nucleic acids that can produce...) Recombinant nucleic acids that encode for the functional forms of any overlap toxin listed in paragraph (b) of this section if the nucleic acids: (i) Can be expressed in vivo or in vitro; or (ii) Are in a vector...

  12. Australia's National Research Collection: Overlap, Uniqueness, and Distribution

    ERIC Educational Resources Information Center

    Genoni, Paul; Wright, Janette

    2011-01-01

    This paper reports on the results of an overlap study of Australian research library collections. The study used OCLC's WorldCat Collection Analysis software to mine data recording Australian holdings on the WorldCat database. The data is analysed according to the results obtained for six "groups" which represent various coalitions of academic,…

  13. Track with overlapping links for dry coal extrusion pumps

    DOEpatents

    Saunders, Timothy; Brady, John D

    2014-01-21

    A chain for a particulate material extrusion pump includes a plurality of links, each of the plurality of links having a link body and a link ledge, wherein each link ledge of the plurality of links at least partially overlaps the link body of an adjacent one of the plurality of links.

  14. Multisensory integration substantiates distributed and overlapping neural networks.

    PubMed

    Pasqualotto, Achille

    2016-01-01

    The hypothesis that highly overlapping networks underlie brain functions (neural reuse) is decisively supported by three decades of multisensory research. Multisensory areas process information from more than one sensory modality and therefore represent the best examples of neural reuse. Recent evidence of multisensory processing in primary visual cortices further indicates that neural reuse is a basic feature of the brain. PMID:27562234

  15. Sarcomeric thick and thin filament overlap influences postmortem proteolysis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The interaction between sarcomere length (SL) and proteolysis on meat tenderness is not clear. Indeed, the extent of thick and thin filament overlap alters actomyosin binding and may alter substrate availability during aging. The objective of this study was to determine the influence of sarcomere le...

  16. Overlapping Issues in Medical Psychology, Rehabilitation Psychology and Behavioral Medicine.

    ERIC Educational Resources Information Center

    Gordon, Wayne A.

    Behavioral medicine is a field which attempts to integrate social, behavioral, and biological sciences through an application of bio-behavioral methods to the prevention, diagnosis, and treatment of illness. Because behavioral medicine overlaps many psychological disciplines, some disciplines of psychology such as medical psychology and…

  17. Overlapping Statistical Segmentation for Effective Indexing of Japanese Text.

    ERIC Educational Resources Information Center

    Ogawa, Yasushi; Matsuda, Toru

    1999-01-01

    Discusses statistical word indexing for Japanese information-retrieval systems and proposes a new method that uses statistics about characters to evaluate a bi-gram's likelihood of being a word boundary. Describes a new segmentation strategy that extracts some overlapping segments and results in higher retrieval effectiveness. (Author/LRW)

  18. Photon statistics of atomic fluorescence after {pi}-pulse excitation

    SciTech Connect

    Yoshimi, Kazuyoshi; Koshino, Kazuki

    2010-09-15

    The photon statistics of atomic fluorescence after {pi}-pulse excitation is investigated in a system in which the input and output ports are connected to an atom. Since spontaneous decay during input pulse excitation occurs, the output pulse generally contains a multiphoton component with a certain probability. We quantitatively evaluate the probability of the output pulse containing multiple photons and determine the conditions for ideal single-photon generation.

  19. Minimal SNP overlap among multiple panels of ancestry informative markers argues for more international collaboration.

    PubMed

    Soundararajan, Usha; Yun, Libing; Shi, Meisen; Kidd, Kenneth K

    2016-07-01

    The century-old use of genetic markers to determine population relationships has morphed in modern forensics into use of markers to determine the ancestry of an individual from a DNA sample. Researchers have identified sets of SNPs that have frequency differences among populations and many sets of SNPs have been published for the purpose of inferring ancestry. Such inference also requires reference datasets for the particular set of SNPs selected. We have identified 21 largely independent published panels of ancestry informative SNPs (AISNPs) and examined their union of 1397 SNPs. No SNP occurs in more than 6 panels. The 1397 SNPs in 21 panels yield a largely empty matrix that is inhibiting progress on more refined ability to infer ancestry for a forensic sample. The most common set of reference populations is the HGDP set of 52 small population samples totaling a thousand individuals. Only 46 (3%) of the 1397 SNPs occur in three or more panels. We assembled a new dataset for 44 of those SNPs involving 4,559 individuals from 73 populations. Analyses of this dataset provided clear differentiation of only five biogeographic regions: sub-Saharan Africa, Europe and SW Asia, South Asia, East Asia, and the Americas. This is an inadequate level of biogeographic resolution already exceeded by other panels. We conclude that more such AISNP panels are not needed and that the forensic community must collaborate to develop a common set of highly differentiating AISNPs typed on a very large number of population samples. How that can be accomplished will be the subject of future discussion. PMID:26977931

  20. Method for simultaneous overlapped communications between neighboring processors in a multiple

    DOEpatents

    Benner, Robert E.; Gustafson, John L.; Montry, Gary R.

    1991-01-01

    A parallel computing system and method having improved performance where a program is concurrently run on a plurality of nodes for reducing total processing time, each node having a processor, a memory, and a predetermined number of communication channels connected to the node and independently connected directly to other nodes. The present invention improves performance of performance of the parallel computing system by providing a system which can provide efficient communication between the processors and between the system and input and output devices. A method is also disclosed which can locate defective nodes with the computing system.

  1. Multiple modes of clearing one's mind of current thoughts: overlapping and distinct neural systems.

    PubMed

    Banich, Marie T; Mackiewicz Seghete, Kristen L; Depue, Brendan E; Burgess, Gregory C

    2015-03-01

    This study used the power of neuroimaging to identify the neural systems that remove information from working memory, a thorny issue to examine because it is difficult to confirm that individuals have actually modified their thoughts. To overcome this problem, brain activation as measured via fMRI was assessed when individuals had to clear their mind of all thought (global clear), clear their mind of a particular thought (targeted clear), or replace the current thought (replace), relative to maintaining an item in working memory. The pattern of activity in posterior sensory regions across these conditions confirmed compliance with task demands. A hierarchy of brain regions involved in cognitive control, including parietal, dorsolateral prefrontal and frontopolar regions, were engaged to varying degrees depending on the manner in which information was removed from working memory. In addition, individuals with greater difficulty in controlling internal thoughts exhibited greater activity in prefrontal brain regions associated with cognitive control, as well as in left lateral prefrontal areas including Broca's area, which is associated with inner speech. PMID:25637772

  2. Measuring image quality in overlapping areas of panoramic composed images

    NASA Astrophysics Data System (ADS)

    Mitjà, Carles; Bover, Toni; Escofet, Jaume

    2012-06-01

    Several professional photographic applications uses the merging of consecutive overlapping images in order to obtain bigger files by means of stitching techniques or extended field of view (FOV) for panoramic images. All of those applications share the fact that the final composed image is obtained by overlapping the neighboring areas of consecutive individual images taken as a mosaic or a series of tiles over the scene, from the same point of view. Any individual image taken with a given lens can carry residual aberrations and several of them will affect more probably the borders of the image frame. Furthermore, the amount of distortion aberration present in the images of a given lens will be reversed in position for the two overlapping areas of a pair of consecutive takings. Finally, the different images used in composing the final one have corresponding overlapping areas taken with different perspective. From all the previously stated can be derived that the software employed must remap all the pixel information in order to resize and match image features in those overlapping areas, providing a final composed image with the desired perspective projection. The work presented analyse two panoramic format images taken with a pair of lenses and composed by means of a state of the art stitching software. Then, a series of images are taken to cover an FOV three times the original lens FOV, the images are merged by means of a software of common use in professional panoramic photography and the final image quality is evaluated through a series of targets positioned in strategic locations over the whole taking field of view. That allows measuring the resulting Resolution and Modulation Transfer Function (MTF). The results are shown compared with the previous measures on the original individual images.

  3. Pulsed discharge production Ar* metastables

    NASA Astrophysics Data System (ADS)

    Han, Jiande; Heaven, Michael C.; Emmons, Daniel; Perram, Glen P.; Weeks, David E.; Bailey, William F.

    2016-03-01

    The production of relatively high densities of Ar* metastables (>1012 cm-3) in Ar/He mixtures, at total pressures close to 1 atm, is essential for the efficient operation of an optically pumped Ar* laser. We have used emission spectroscopy and diode laser absorption spectroscopy measurements to observe the production and decay of Ar* in a parallel plate pulsed discharge. With discharge pulses of 1 μs duration we find that metastable production is dominated by processes occurring within the first 100 ns of the gas break-down. Application of multiple, closely spaced discharge pulses yields insights concerning conditions that favor metastable production. This information has been combined with time-resolved measurements of voltage and current. The experimental results and preliminary modeling of the discharge kinetics are presented.

  4. Controlling the spectrum of light pulses by dynamical electromagnetically induced transparency

    SciTech Connect

    Ignesti, Emilio; Sali, Emiliano; Tognetti, Marco V.; Buffa, Roberto; Fini, Lorenzo; Cavalieri, Stefano

    2011-05-15

    We present a theoretical and experimental study on the possibility of spectral manipulation of weak probe-laser pulses in the presence of dynamical electromagnetically induced transparency. We predict a spectral enlargement or narrowing process depending on whether the probe-laser pulse is overlapped by the rising or the falling edge of the coupling pulse, respectively. The results of an experiment in sodium atomic vapors confirm the theoretical predictions.

  5. Effect of Pulsed Nd: YAG Laser Powers On 304 Stainless Steel Welding

    SciTech Connect

    Candan, L.; Demir, A.; Akman, E.

    2007-04-23

    In this study, optimum welding parameters are obtained for 1mm thickness type 304 stainless steel welding using the Lumonics JK760TR pulsed Nd:YAG laser. The influences of laser welding parameters such as pulse duration, focal position, frequency, laser power, welding speed, and shielding gas (N2) pressure on penetration defining welding quality are investigated. Also comparisons of overlap ratios are presented between theory and experiment for pulse duration, frequency and welding speed.

  6. ADJUSTABLE DOUBLE PULSE GENERATOR

    DOEpatents

    Gratian, J.W.; Gratian, A.C.

    1961-08-01

    >A modulator pulse source having adjustable pulse width and adjustable pulse spacing is described. The generator consists of a cross coupled multivibrator having adjustable time constant circuitry in each leg, an adjustable differentiating circuit in the output of each leg, a mixing and rectifying circuit for combining the differentiated pulses and generating in its output a resultant sequence of negative pulses, and a final amplifying circuit for inverting and square-topping the pulses. (AEC)

  7. Deterministic processing of alumina with ultra-short laser pulses

    SciTech Connect

    Furmanski, J; Rubenchik, A M; Shirk, M D; Stuart, B C

    2007-06-27

    Ultrashort pulsed lasers can accurately ablate materials which are refractory, transparent, or are otherwise difficult to machine by other methods. The typical method of machining surfaces with ultrashort laser pulses is by raster scanning, or the machining of sequentially overlapping linear trenches. Experiments in which linear trenches were machined in alumina at various pulse overlaps and incident fluences are presented, and the dependence of groove depth on these parameters established. A model for the machining of trenches based on experimental data in alumina is presented, which predicts and matches observed trench geometry. This model is then used to predict optimal process parameters for the machining of trenches for maximal material removal rate for a given laser.

  8. A comparative study of novel spectrophotometric resolution techniques applied for pharmaceutical mixtures with partially or severely overlapped spectra

    NASA Astrophysics Data System (ADS)

    Lotfy, Hayam M.; Tawakkol, Shereen M.; Fahmy, Nesma M.; Shehata, Mostafa A.

    2015-02-01

    Simultaneous determination of mixtures of lidocaine hydrochloride (LH), flucortolone pivalate (FCP), in presence of chlorquinaldol (CQ) without prior separation steps was applied using either successive or progressive resolution techniques. According to the concentration of CQ the extent of overlapping changed so it can be eliminated from the mixture to get the binary mixture of LH and FCP using ratio subtraction method for partially overlapped spectra or constant value via amplitude difference followed by ratio subtraction or constant center followed by spectrum subtraction spectrum subtraction for severely overlapped spectra. Successive ratio subtraction was coupled with extended ratio subtraction, constant multiplication, derivative subtraction coupled constant multiplication, and spectrum subtraction can be applied for the analysis of partially overlapped spectra. On the other hand severely overlapped spectra can be analyzed by constant center and the novel methods namely differential dual wavelength (D1 DWL) for CQ, ratio difference and differential derivative ratio (D1 DR) for FCP, while LH was determined by applying constant value via amplitude difference followed by successive ratio subtraction, and successive derivative subtraction. The spectra of the cited drugs can be resolved and their concentrations are determined progressively from the same ratio spectrum using amplitude modulation method. The specificity of the developed methods was investigated by analyzing laboratory prepared mixtures and were successfully applied for the analysis of pharmaceutical formulations containing the cited drugs with no interference from additives. The proposed methods were validated according to the ICH guidelines. The obtained results were statistically compared with those of the official or reported methods; using student t-test, F-test, and one way ANOVA, showing no significant difference with respect to accuracy and precision.

  9. Method and apparatus for measuring the intensity and phase of an ultrashort light pulse

    DOEpatents

    Kane, Daniel J.; Trebino, Rick P.

    1998-01-01

    The pulse shape I(t) and phase evolution x(t) of ultrashort light pulses are obtained using an instantaneously responding nonlinear optical medium to form a signal pulse. A light pulse, such a laser pulse, is split into a gate pulse and a probe pulse, where the gate pulse is delayed relative to the probe pulse. The gate pulse and the probe pulse are combined within an instantaneously responding optical medium to form a signal pulse functionally related to a temporal slice of the gate pulse corresponding to the time delay of the probe pulse. The signal pulse is then input to a wavelength-selective device to output pulse field information comprising intensity vs. frequency for a first value of the time delay. The time delay is varied over a range of values effective to yield an intensity plot of signal intensity vs. wavelength and delay. In one embodiment, the beams are overlapped at an angle so that a selected range of delay times is within the intersection to produce a simultaneous output over the time delays of interest.

  10. Pulses, linkages, and boundaries of coupled aquatic-terrestrial ecosystems

    NASA Astrophysics Data System (ADS)

    Tockner, K.

    2009-04-01

    Riverine floodplains are linked ecosystems where terrestrial and aquatic habitats overlap, creating a zone where they interact, the aquatic-terrestrial interface. The interface or boundary between aquatic and terrestrial habitats is an area of transition, contact or separation; and connectivity between these habitats may be defined as the ease with which organisms, matter or energy traverse these boundaries. Coupling of aquatic and terrestrial systems generates intertwining food webs, and we may predict that coupled systems are more productive than separated ones. For example, riparian consumers (aquatic and terrestrial) have alternative prey items external to their respective habitats. Such subsidized assemblages occupy a significant higher trophic position than assemblages in unsubsidized areas. Further, cross-habitat linkages are often pulsed; and even small pulses of a driver (e.g. short-term increases in flow) can cause major resource pulses (i.e. emerging aquatic insects) that control the recipient community. For example, short-term additions of resources, simulating pulsed inputs of aquatic food to terrestrial systems, suggest that due to resource partitioning and temporal separation among riparian arthropod taxa the resource flux from the river to the riparian zone increases with increasing riparian consumer diversity. I will discuss the multiple transfer and transformation processes of matter and organisms across aquatic-terrestrial habitats. Key landscape elements along river corridors are vegetated islands that function as instream riparian areas. Results from Central European rivers demonstrate that islands are in general more natural than fringing riparian areas, contribute substantially to total ecotone length, and create diverse habitats in the aquatic and terrestrial realm. In braided rivers, vegetated islands are highly productive landscape elements compared to the adjacent aquatic area. However, aquatic habitats exhibit a much higher decomposition

  11. Maximal charge injection of consecutive electron pulses with uniform temporal pulse separation

    SciTech Connect

    Liu, Y. L.; Zhang, P.; Chen, S. H.; Ang, L. K.

    2015-08-15

    A charge sheet model is proposed for the study of the space-charge limited density of consecutive electron pulses injected to in a diode with uniform temporal pulse separation. Based on the model, an analytical formula is derived for expressing the dependency of the charge density limit on the gap spacing, gap voltage, and pulse separation. The theoretical results are verified by numerical solutions up to electron energy of a few MeV, including relativistic effects. The model can be applied to the design of multiple-pulse electron beams for time resolved electron microscopy and free electron lasers.

  12. Bipolar nanosecond electric pulses are less efficient at electropermeabilization and killing cells than monopolar pulses

    PubMed Central

    Ibey, Bennett L.; Ullery, Jody; Pakhomova, Olga N.; Roth, Caleb C.; Semenov, Iurri; Beier, Hope T.; Tarango, Melissa; Xiao, Shu; Schoenbach, Karl; Pakhomov, Andrei G.

    2014-01-01

    Multiple studies have shown that bipolar (BP) electric pulses in the microsecond range are more effective at permeabilizing cells while maintaining similar cell survival rates as compared to monopolar (MP) pulse equivalents. In this paper, we investigated whether the same advantage existed for BP nanosecond-pulsed electric fields (nsPEF) as compared to MP nsPEF. To study permeabilization effectiveness, MP or BP pulses were delivered to single Chinese hamster ovary (CHO) cells and the response of three dyes, Calcium Green-1, Propidium Iodide (PI), and FM1-43, was measured by confocal microscopy. Results show that BP pulses were less effective at increasing intracellular calcium concentration or PI uptake and cause less membrane reorganization (FM1-43) than MP pulses. Twenty-four hour survival was measured in three cell lines (Jurkat, U937, CHO) and over ten times more BP pulses were required to induce death as compared to MP pulses of similar magnitude and duration. Flow cytometry analysis of CHO cells after exposure (15 minutes) revealed that to achieve positive FITC-Annexin V and PI expression, ten times more BP pulses were required than MP pulses. Overall, unlike longer pulse exposures, BP nsPEF exposures proved far less effective at both membrane permeabilization and cell killing than MP nsPEF. PMID:24332942

  13. Micropattern-Guided Assembly of Overlapping Pairs of Dynamic Microtubules

    PubMed Central

    Fourniol, Franck J.; Li, Tai-De; Bieling, Peter; Mullins, R. Dyche; Fletcher, Daniel A.; Surrey, Thomas

    2014-01-01

    Interactions between antiparallel microtubules are essential for the organization of spindles in dividing cells. The ability to form immobilized antiparallel microtubule pairs in vitro, combined with the ability to image them via TIRF microscopy, permits detailed biochemical characterization of microtubule cross-linking proteins and their effects on microtubule dynamics. Here, we describe methods for chemical micropatterning of microtubule seeds on glass surfaces in configurations that specifically promote the formation of antiparallel microtubule overlaps in vitro. We demonstrate that this assay is especially well suited for reconstitution of minimal midzone overlaps stabilized by the antiparallel microtubule cross-linking protein PRC1 and its binding partners. The micropatterning method is suitable for use with a broad range of proteins, and the assay is generally applicable to any microtubule cross-linking protein. PMID:24630116

  14. Multifractal spectrum of self-similar measures with overlap

    NASA Astrophysics Data System (ADS)

    Bruggeman, Cameron; Hare, Kathryn E.; Mak, Cheuk Yu

    2014-02-01

    It is well known that the multifractal spectrum of a self-similar measure satisfying the open set condition is a closed interval. Recently, there has been interest in the overlapping case and it is known that in this case there can be isolated points. We prove that for an interesting class of self-similar measures with overlap the spectrum consists of a closed interval union together with at most two isolated points. In the case of convolutions of uniform Cantor measures we determine the end points of the interval and the isolated points. We also give an example of a related self-similar measure where the spectrum is a union of two disjoint intervals. In contrast, we prove that if one considers quotient measures of this class on the quotient group [0, 1], rather than the real line, the multifractal spectrum is a closed interval.

  15. Discriminating crop and other canopies by overlapping binary image layers

    NASA Astrophysics Data System (ADS)

    Doi, Ryoichi

    2013-02-01

    For optimal management of agricultural fields by remote sensing, discrimination of the crop canopy from weeds and other objects is essential. In a digital photograph, a rice canopy was discriminated from a variety of weed and tree canopies and other objects by overlapping binary image layers of red-green-blue and other color components indicating the pixels with target canopy-specific (intensity) values based on the ranges of means ±(3×) standard deviations. By overlapping and merging the binary image layers, the target canopy specificity improved to 0.0015 from 0.027 for the yellow 1× standard deviation binary image layer, which was the best among all combinations of color components and means ±(3×) standard deviations. The most target rice canopy-likely pixels were further identified by limiting the pixels at different luminosity values. The discriminatory power was also visually demonstrated in this manner.

  16. A longitudinal assessment of the victim-offender overlap.

    PubMed

    Jennings, Wesley G; Higgins, George E; Tewksbury, Richard; Gover, Angela R; Piquero, Alex R

    2010-12-01

    Although research has established an offending/victimization overlap and that offenders and victims share similar characteristics, much less work has examined the longitudinal sequencing of victimization and offending in the same developmental period and whether key risk/protective factors significantly distinguish both offenders and victims.This study uses longitudinal data from a large sample of adolescents to examine these issues and does so using a novel methodological approach, the trajectory methodology, which allows for the examination of covariation between offending and victimization. Results indicate that there is a considerable degree of overlap between victims of physical violence and offenders over time and that certain covariates including school commitment, parental monitoring, low self-control, and sex significantly discriminate victim and offender groups. Furthermore, low self-control appears to be the most salient risk factor for distinguishing both victimization and delinquency trajectories.Theoretical and policy implications and directions for future research are identified. PMID:20068116

  17. Measuring droplet size distributions from overlapping interferometric particle images.

    PubMed

    Bocanegra Evans, Humberto; Dam, Nico; van der Voort, Dennis; Bertens, Guus; van de Water, Willem

    2015-02-01

    Interferometric particle imaging provides a simple way to measure the probability density function (PDF) of droplet sizes from out-focus images. The optical setup is straightforward, but the interpretation of the data is a problem when particle images overlap. We propose a new way to analyze the images. The emphasis is not on a precise identification of droplets, but on obtaining a good estimate of the PDF of droplet sizes in the case of overlapping particle images. The algorithm is tested using synthetic and experimental data. We next use these methods to measure the PDF of droplet sizes produced by spinning disk aerosol generators. The mean primary droplet diameter agrees with predictions from the literature, but we find a broad distribution of satellite droplet sizes. PMID:25725854

  18. Phenotype of asthma-chronic obstructive pulmonary disease overlap syndrome

    PubMed Central

    2015-01-01

    Many patients with asthma or chronic obstructive pulmonary disease (COPD) have overlapping characteristics of both diseases. By spirometric definition, patients with both fixed airflow obstruction (AO) and bronchodilator reversibility or fixed AO and bronchial hyperresponsiveness can be considered to have asthma-COPD overlap syndrome (ACOS). However, patients regarded to have ACOS by spirometric criteria alone are heterogeneous and can be classified by phenotype. Eosinophilic inflammation, a history of allergic disease, and smoke exposure are important components in the classification of ACOS. Each phenotype has a different underlying pathophysiology, set of characteristics, and prognosis. Medical treatment for ACOS should be tailored according to phenotype. A narrower definition of ACOS that includes both spirometric and clinical criteria is needed. PMID:26161009

  19. Severe Cutaneous Drug Reactions: Do Overlapping Forms Exist?

    PubMed

    Horcajada-Reales, C; Pulido-Pérez, A; Suárez-Fernández, R

    2016-01-01

    Acute generalized exanthematous pustulosis, Stevens-Johnson syndrome, toxic epidermal necrolysis, and drug reaction with eosinophilia and systemic symptoms are all severe hypersensitivity reactions to medications. While each of these reactions is a well-established entity with specific diagnostic criteria, clinicians see cases that fulfill criteria for more than one form, prompting discussion on the possibility of combined forms. Such overlapping clinical pictures meeting the criteria for 2 conditions have thus become a topic of debate in dermatology in recent years. We describe 2 patients with cutaneous drug reactions having the characteristics of both acute generalized exanthematous pustulosis and Stevens-Johnson syndrome -toxic epidermal necrolysis. We also review previously published cases and current thinking on such overlapping conditions. PMID:26520037

  20. Overlap in Eating Disorders and Obesity in Adolescence.

    PubMed

    Rancourt, Diana; McCullough, Mary Beth

    2015-10-01

    While eating disorders and obesity have traditionally been conceptualized as separate conditions, recent research suggests important overlap in several areas including etiology, comorbidity, risk factors, and prevention approaches. Examining the commonality among these conditions is particularly important as adolescents who present with both eating disorder symptomology and obesity demonstrate poorer outcomes within weight control treatments and are at greater risk for future development of full threshold eating disorders and additional weight gain. The purpose of this paper is to review the research examining the overlap in prevalence rates for eating disorders and obesity in adolescents, as well as shared etiology, risk factors, and psychiatric and medical comorbidities. Current preventive and treatment approaches also will be discussed, while highlighting the need for more integrated assessment, prevention, and treatment efforts that focus on maladaptive eating and activity patterns shared by both eating disorders and obesity. PMID:26303593

  1. Auditing Complex Concepts in Overlapping Subsets of SNOMED

    PubMed Central

    Wang, Yue; Wei, Duo; Xu, Junchuan; Elhanan, Gai; Perl, Yehoshua; Halper, Michael; Chen, Yan; Spackman, Kent A.; Hripcsak, George

    2008-01-01

    Limited resources and the sheer volume of concepts make auditing a large terminology, such as SNOMED CT, a daunting task. It is essential to devise techniques that can aid an auditor by automatically identifying concepts that deserve attention. A methodology for this purpose based on a previously introduced abstraction network (called the p-area taxonomy) for a SNOMED CT hierarchy is presented. The methodology algorithmically gathers concepts appearing in certain overlapping subsets, defined exclusively with respect to the p-area taxonomy, for review. The results of applying the methodology to SNOMED’s Specimen hierarchy are presented. These results are compared against a control sample composed of concepts residing in subsets without the overlaps. With the use of the double bootstrap, the concept group produced by our methodology is shown to yield a statistically significant higher proportion of error discoveries. PMID:18998838

  2. From domain wall to overlap in 2 + 1d

    NASA Astrophysics Data System (ADS)

    Hands, Simon

    2016-03-01

    The equivalence of domain wall and overlap fermion formulations is demonstrated for lattice gauge theories in 2 + 1 spacetime dimensions with parity-invariant mass terms. Even though the domain wall approach distinguishes propagation along a third direction with projectors 1/2 (1 ±γ3), the truncated overlap operator obtained for finite wall separation Ls is invariant under interchange of γ3 and γ5. In the limit Ls → ∞ the resulting Ginsparg-Wilson relations recover the expected U (2Nf) global symmetry up to O (a) corrections. Finally it is shown that finite-Ls corrections to bilinear condensates associated with dynamical mass generation are characterised by whether even powers of the symmetry-breaking mass are present; such terms are absent for antihermitian bilinears such as i ψ bar γ3 ψ, markedly improving the approach to the large-Ls limit.

  3. Disentangling Overlapping Astronomical Sources Using Spatial and Spectral Information

    NASA Astrophysics Data System (ADS)

    Jones, David E.; Kashyap, Vinay L.; van Dyk, David A.

    2015-08-01

    We present a powerful new algorithm that combines both spatial information (event locations and the point-spread function) and spectral information (photon energies) to separate photons from overlapping sources. We use Bayesian statistical methods to simultaneously infer the number of overlapping sources, to probabilistically separate the photons among the sources, and to fit the parameters describing the individual sources. Using the Bayesian joint posterior distribution, we are able to coherently quantify the uncertainties associated with all these parameters. The advantages of combining spatial and spectral information are demonstrated through a simulation study. The utility of the approach is then illustrated by analysis of observations of FK Aqr and FL Aqr with the XMM-Newton Observatory and the central region of the Orion Nebula Cluster with the Chandra X-ray Observatory.

  4. Functional overlap of the Arabidopsis leaf and root microbiota.

    PubMed

    Bai, Yang; Müller, Daniel B; Srinivas, Girish; Garrido-Oter, Ruben; Potthoff, Eva; Rott, Matthias; Dombrowski, Nina; Münch, Philipp C; Spaepen, Stijn; Remus-Emsermann, Mitja; Hüttel, Bruno; McHardy, Alice C; Vorholt, Julia A; Schulze-Lefert, Paul

    2015-12-17

    Roots and leaves of healthy plants host taxonomically structured bacterial assemblies, and members of these communities contribute to plant growth and health. We established Arabidopsis leaf- and root-derived microbiota culture collections representing the majority of bacterial species that are reproducibly detectable by culture-independent community sequencing. We found an extensive taxonomic overlap between the leaf and root microbiota. Genome drafts of 400 isolates revealed a large overlap of genome-encoded functional capabilities between leaf- and root-derived bacteria with few significant differences at the level of individual functional categories. Using defined bacterial communities and a gnotobiotic Arabidopsis plant system we show that the isolates form assemblies resembling natural microbiota on their cognate host organs, but are also capable of ectopic leaf or root colonization. While this raises the possibility of reciprocal relocation between root and leaf microbiota members, genome information and recolonization experiments also provide evidence for microbiota specialization to their respective niche. PMID:26633631

  5. Phenotype of asthma-chronic obstructive pulmonary disease overlap syndrome.

    PubMed

    Rhee, Chin Kook

    2015-07-01

    Many patients with asthma or chronic obstructive pulmonary disease (COPD) have overlapping characteristics of both diseases. By spirometric definition, patients with both fixed airflow obstruction (AO) and bronchodilator reversibility or fixed AO and bronchial hyperresponsiveness can be considered to have asthma-COPD overlap syndrome (ACOS). However, patients regarded to have ACOS by spirometric criteria alone are heterogeneous and can be classified by phenotype. Eosinophilic inflammation, a history of allergic disease, and smoke exposure are important components in the classification of ACOS. Each phenotype has a different underlying pathophysiology, set of characteristics, and prognosis. Medical treatment for ACOS should be tailored according to phenotype. A narrower definition of ACOS that includes both spirometric and clinical criteria is needed. PMID:26161009

  6. Overture: An Object-Oriented Framework for Overlapping Grid Applications

    SciTech Connect

    Henshaw, W.D.

    2002-04-04

    The Overture framework is an object-oriented environment for solving partial differential equations on over-lapping grids. We describe some of the tools in Overture that can be used to generate grids and solve partial differential equations (PDEs). Overture contains a collection of C++ classes that can be used to write PDE solvers either at a high level or at a lower level for efficiency. There are also a number of tools provided with Overture that can be used with no programming effort. These tools include capabilities to: repair computer-aided-design (CAD) geometries and build global surface triangulations; generate surface and volume grids with hyperbolic grid generation; generate composite overlapping grids; generate hybrid (unstructured) grids; and solve particular PDEs such as the incompressible and compressible Navier-Stokes equations.

  7. Long pulse production from short pulses

    DOEpatents

    Toeppen, J.S.

    1994-08-02

    A method of producing a long output pulse from a short pump pulse is disclosed, using an elongated amplified fiber having a doped core that provides an amplifying medium for light of one color when driven into an excited state by light of a shorter wavelength and a surrounding cladding. A seed beam of the longer wavelength is injected into the core at one end of the fiber and a pump pulse of the shorter wavelength is injected into the cladding at the other end of the fiber. The counter-propagating seed beam and pump pulse will produce an amplified output pulse having a time duration equal to twice the transit time of the pump pulse through the fiber plus the length of the pump pulse. 3 figs.

  8. Long pulse production from short pulses

    DOEpatents

    Toeppen, John S.

    1994-01-01

    A method of producing a long output pulse (SA) from a short pump pulse (P), using an elongated amplified fiber (11) having a doped core (12) that provides an amplifying medium for light of one color when driven into an excited state by light of a shorter wavelength and a surrounding cladding 13. A seed beam (S) of the longer wavelength is injected into the core (12) at one end of the fiber (11) and a pump pulse (P) of the shorter wavelength is injected into the cladding (13) at the other end of the fiber (11). The counter-propagating seed beam (S) and pump pulse (P) will produce an amplified output pulse (SA) having a time duration equal to twice the transit time of the pump pulse (P) through the fiber (11) plus the length of the pump pulse (P).

  9. Effect of inter-pulse delay time on production and size properties of colloidal nanoparticles prepared by collinear double-pulse laser ablation in liquid

    NASA Astrophysics Data System (ADS)

    Fattahi, Behzad; Mahdieh, Mohammah Hossein

    2016-08-01

    The influence of inter-pulse delay times (0–20 ns) between two collinear sequential nanosecond pulses on the production and size properties (mean size and size distribution) of colloidal nanoparticles prepared by pulsed laser ablation of a silver target in a distilled water medium has been studied. Various laser fluences at different inter-pulse delay times between two collinear pulses were used. Furthermore, for a better understanding of the effect of the double-pulse and single-pulse mode, experiments were performed. The characterization of the synthesized colloidal nanoparticles was investigated using scanning electron microscopy (SEM) and UV–vis absorption spectroscopy. Our results showed that 5 ns time-delayed double-pulse laser ablation results in the production of nanoparticles with the highest concentration among the other time-delayed ablation experiments and even more than single-pulse-mode experiments. It also found that using a double-pulse approach with inter-pulse delay times in the range of 0–20 ns leads to the production of nanoparticles with smaller mean sizes and narrower size distributions in comparison to single-pulse-mode laser ablation. The effect of time overlapping between two pulses in the case of double-pulse ablation was analyzed.

  10. Quantum statistics of overlapping modes in open resonators

    SciTech Connect

    Hackenbroich, Gregor; Viviescas, Carlos; Haake, Fritz

    2003-12-01

    We study the quantum dynamics of optical fields in weakly confining resonators with overlapping modes. Employing a recently developed quantization scheme involving a discrete set of resonator modes and continua of external modes we derive Langevin equations and a master equation for the resonator modes. Langevin dynamics and the master equation are proved to be equivalent in the Markovian limit. Our open-resonator dynamics may be used as a starting point for a quantum theory of random lasers.

  11. Structural Design Strategies for Improved Small Overlap Crashworthiness Performance.

    PubMed

    Mueller, Becky C; Brethwaite, Andrew S; Zuby, David S; Nolan, Joseph M

    2014-11-01

    In 2012, the Insurance Institute for Highway Safety (IIHS) began a 64 km/h small overlap frontal crash test consumer information test program. Thirteen automakers already have redesigned models to improve test performance. One or more distinct strategies are evident in these redesigns: reinforcement of the occupant compartment, use of energy-absorbing fender structures, and the addition of engagement structures to induce vehicle lateral translation. Each strategy influences vehicle kinematics, posing additional challenges for the restraint systems. The objective of this two-part study was to examine how vehicles were modified to improve small overlap test performance and then to examine how these modifications affect dummy response and restraint system performance. Among eight models tested before and after design changes, occupant compartment intrusion reductions ranged from 6 cm to 45 cm, with the highest reductions observed in models with the largest number of modifications. All redesigns included additional occupant compartment reinforcement, one-third added structures to engage the barrier, and two modified a shotgun load path. Designs with engagement structures produced greater glance-off from the barrier and exhibited lower delta Vs but experienced more lateral outboard motion of the dummy. Designs with heavy reinforcement of the occupant compartment had higher vehicle accelerations and delta V. In three cases, these apparent trade-offs were not well addressed by concurrent changes in restraint systems and resulted in increased injury risk compared with the original tests. Among the 36 models tested after design changes, the extent of design changes correlated to structural performance. Half of the vehicles with the lowest intrusion levels incorporated aspects of all three design strategies. Vehicle kinematics and dummy and restraint system characteristics were similar to those observed in the before/after pairs. Different combinations of structural

  12. Pollination niche overlap between a parasitic plant and its host.

    PubMed

    Ollerton, Jeff; Stott, Adrian; Allnutt, Emma; Shove, Sam; Taylor, Chloe; Lamborn, Ellen

    2007-03-01

    Niche theory predicts that species which share resources should evolve strategies to minimise competition for those resources, or the less competitive species would be extirpated. Some plant species are constrained to co-occur, for example parasitic plants and their hosts, and may overlap in their pollination niche if they flower at the same time and attract the same pollinators. Using field observations and experiments between 1996 and 2006, we tested a series of hypotheses regarding pollination niche overlap between a specialist parasitic plant Orobanche elatior (Orobanchaceae) and its host Centaurea scabiosa (Asteraceae). These species flower more or less at the same time, with some year-to-year variation. The host is pollinated by a diverse range of insects, which vary in their effectiveness, whilst the parasite is pollinated by a single species of bumblebee, Bombus pascuorum, which is also an effective pollinator of the host plant. The two species therefore have partially overlapping pollination niches. These niches are not finely subdivided by differential pollen placement, or by diurnal segregation of the niches. We therefore found no evidence of character displacement within the pollination niches of these species, possibly because pollinators are not a limiting resource for these plants. Direct observation of pollinator movements, coupled with experimental manipulations of host plant inflorescence density, showed that Bombus pascuorum only rarely moves between inflorescences of the host and the parasite and therefore the presence of one plant is unlikely to be facilitating pollination in the other. This is the first detailed examination of pollination niche overlap in a plant parasite system and we suggest avenues for future research in relation to pollination and other shared interactions between parasitic plants and their hosts. PMID:17146683

  13. Pin diode calibration - beam overlap monitoring for low energy cooling

    SciTech Connect

    Drees, A.; Montag, C.; Thieberger, P.

    2015-09-30

    We were trying to address the question whether or not the Pin Diodes, currently installed approximately 1 meter downstream of the RHIC primary collimators, are suitable to monitor a recombination signal from the future RHIC low energy cooling section. A maximized recombination signal, with the Au+78 ions being lost on the collimator, will indicate optimal Au-electron beam overlap as well as velocity matching of the electron beam in the cooling section.

  14. The Las Cañadas caldera (Tenerife, Canary Islands): an overlapping collapse caldera generated by magma-chamber migration

    NASA Astrophysics Data System (ADS)

    Marti, J.; Gudmundsson, A.

    2000-12-01

    The Las Cañadas caldera is one of the most important geological structures of Tenerife. Stratigraphic, structural, volcanological, petrological, geochronological, and geophysical data suggest that the Las Cañadas caldera resulted from multiple vertical collapse episodes that occurred during the construction of the Las Cañadas edifice Upper Group. Three long-term (≥200 ka) cycles of phonolitic explosive activity, each culminating with a caldera collapse, have been identified in the Upper Group. During the construction of the Upper Group, the focus of felsic volcanism migrated from west to east. Using the results of field observations, experimental analogue models and numerical studies, we propose that the formation of the overlapping Las Cañadas collapse caldera is related to the migration of the associated magma chamber. Our model implies that each collapse of this overlapping caldera partly, or completely, destroyed the feeding magma chamber. This destruction led to changes in the local stress field that favoured the formation of a new chamber at one side of the previous one, resulting in magma-chamber migration. The proposed model accounts for the formation of the Las Cañadas caldera. In particular, it explains the geometrical relationships, stratigraphy and chronology of the caldera wall deposits. Comparison with other overlapping collapse calderas suggests that our model may apply to other overlapping calderas.

  15. Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens).

    PubMed

    Davis, William T; Drymon, J Marcus; Powers, Sean P

    2015-01-01

    Understanding the complex nature of direct and indirect species interactions is a critical precursor to successful resource management. In the northern Gulf of Mexico fisheries ecosystem, red snapper (Lutjanus campechanus) and vermilion snapper (Rhomboplites aurorubens) are two commercially harvested species within a larger reef fish complex. These two species share similar habitats and diets; however, little is known about how these species partition habitat and dietary resources. In this study we examined the extent of spatial and dietary overlap between red snapper and vermilion snapper, and experimentally compared their feeding behavior. Field data from multiple gear types demonstrates that red snapper and vermilion snapper frequently cohabited reefs in the northern Gulf of Mexico, and Pianka's niche overlap indices suggest significantly overlapping diets. Experimental manipulations show that red snapper are the dominant forager of the two species, as red snapper foraging alone ate more shrimp per fish than vermilion snapper in both the single species (p = 0.003) and mixed species (p = 0.02) treatments. In addition, red snapper ate significantly more shrimp per fish in the mixed species treatment than in the single species treatment (p = 0.04). Vermilion snapper shrimp consumption per fish did not differ significantly between mixed and single species treatments. Cumulatively, our results suggest that spatial and dietary overlap could lead to competition between red and vermilion snapper in the study area; however, conclusively determining the existence of such competition would require further research. PMID:26630481

  16. Spatial and Dietary Overlap Creates Potential for Competition between Red Snapper (Lutjanus campechanus) and Vermilion snapper (Rhomboplites aurorubens)

    PubMed Central

    Davis, William T.; Drymon, J. Marcus; Powers, Sean P.

    2015-01-01

    Understanding the complex nature of direct and indirect species interactions is a critical precursor to successful resource management. In the northern Gulf of Mexico fisheries ecosystem, red snapper (Lutjanus campechanus) and vermilion snapper (Rhomboplites aurorubens) are two commercially harvested species within a larger reef fish complex. These two species share similar habitats and diets; however, little is known about how these species partition habitat and dietary resources. In this study we examined the extent of spatial and dietary overlap between red snapper and vermilion snapper, and experimentally compared their feeding behavior. Field data from multiple gear types demonstrates that red snapper and vermilion snapper frequently cohabited reefs in the northern Gulf of Mexico, and Pianka’s niche overlap indices suggest significantly overlapping diets. Experimental manipulations show that red snapper are the dominant forager of the two species, as red snapper foraging alone ate more shrimp per fish than vermilion snapper in both the single species (p = 0.003) and mixed species (p = 0.02) treatments. In addition, red snapper ate significantly more shrimp per fish in the mixed species treatment than in the single species treatment (p = 0.04). Vermilion snapper shrimp consumption per fish did not differ significantly between mixed and single species treatments. Cumulatively, our results suggest that spatial and dietary overlap could lead to competition between red and vermilion snapper in the study area; however, conclusively determining the existence of such competition would require further research. PMID:26630481

  17. How do keratinizing disorders and blistering disorders overlap?

    PubMed

    Hamada, Takahiro; Tsuruta, Daisuke; Fukuda, Shunpei; Ishii, Norito; Teye, Kwesi; Numata, Sanae; Dainichi, Teruki; Karashima, Tadashi; Ohata, Chika; Furumura, Minao; Hashimoto, Takashi

    2013-02-01

    Inherited keratinizing disorders are caused by mutations in the genes encoding cornified cell envelope proteins, enzymes and their inhibitors, adhesion molecules, cytoskeletal proteins and others in the epidermis. These molecules are known to regulate differentiation, proliferation and cell adhesions. Intriguingly, some keratinizing disorders show blistering skin lesions, while some inherited blistering disorders show abnormal keratinization. Therefore, hereditary keratinizing and blistering diseases are closely related and show overlapping genetic backgrounds. In this review, we overviewed keratinizing and blistering disorders in terms of overlapping of the two disease groups. Gene mutations in desmosomal components cause striate keratoderma, Naxos disease, epidermolytic palmoplantar keratoderma and plakophilin deficiency, which first show skin fragility and blisters and later hyperkeratosis. Gene mutations in hemidesmosomal components cause various forms of epidermolysis bullosa, some of which show hyperkeratosis on the nails, palms and soles, in addition to blister formation. Diseases with gene mutations in calcium pump proteins are Darier disease and Hailey-Hailey disease, which show clinicopathological overlaps and develop both keratinizing and blistering skin lesions. Finally, gene mutations in epidermal keratins cause epidermolysis bullosa simplex, epidermolytic ichthyosis, superficial epidermolytic ichthyosis, epidermolytic palmoplantar keratoderma and pachyonychia congenita/focal palmoplantar keratoderma, which show thickening of the palms and soles with underlying blister formation. In general, responsible proteins for diseases developing both keratinizing and blistering conditions are adhesion molecules, calcium pump proteins and keratins, but not connexins, cornified cell envelop proteins, enzymes or inhibitors. It is still unknown how particular keratinizing diseases develop blisters and vice versa. PMID:23039137

  18. Overlapping Cognitive Patterns in Schizophrenia and Methamphetamine Dependence

    PubMed Central

    Salo, Ruth; Ravizza, Susan; Fassbender, Catherine

    2012-01-01

    Objective To examine whether overlapping cognitive deficits exist in currently drug-abstinent chronic methamphetamine (MA) abusers and schizophrenia (SZ) patients. Background Both SZ and chronic MA abuse are associated with frontostriatal disruption as well as deficits in cognitive control such as selective attention. To identify overlapping cognitive profiles, we compared performance of the two groups on the Stroop attention task. Method Data were analyzed from 69 MA abusers who had been MA-abstinent for differing periods of time and from 23 SZ patients and 38 non-substance-abusing controls. Results The MA abusers in early abstinence displayed more Stroop interference than the SZ patients (p= 0.004), long-term abstinent MA abusers (p= 0.009), and controls (p = 0.002). In the MA abusers, the magnitude of Stroop interference correlated positively with longer drug use [p = 0.01] and negatively with longer drug abstinence [p= 0.04]. No correlations were found between psychotic symptoms and task performance. Conclusions On this task of attentional selection, only the MA abusers in early stages of abstinence showed performance deficits compared to controls. More research is needed to further elucidate overlapping patterns between MA abuse and SZ. PMID:22123586

  19. Segregation and chain extension of overlapping semiflexible macromolecules in channel

    NASA Astrophysics Data System (ADS)

    Cifra, Peter; Racko, Dusan

    2014-03-01

    Decrease of overall chain extension in channel by local backfolding together with an increased extension of sequences running parallel have been reported to complicate linearization experiments under moderate confinements. Less known related effect occurs in two overlapping chains in channel. Investigation of overlap and segregation of polymer coils in channel was extended here relative to previous studies from flexible to semiflexible chains. Results are based on simulation of confinement free energy of a chain and on direct simulation of coil segregation process. For confinement free energy we confirm the predicted opposite trend with increasing chain stiffness for the weak and strong confinement regimes. Results of two different approaches are consistent, in agreement with theoretical analysis and indicate a stronger segregation tendency of flexible chains relative to semiflexible chains, both in its extent and dynamics. Mutual excluded volume between confined chains leads to extension of overlapping chains along channel and this effect is stronger for flexible chains but weak for stiffer macromolecules such as DNA. Support from Slovak Res. and Develop. Agency (SRDA-0451-11) is acknowledged. D. Racko, P. Cifra, J. Chem. Phys. 138, 184904 (2013)

  20. Direct and indirect effects in the regulation of overlapping promoters.

    PubMed

    Bendtsen, Kristian Moss; Erdossy, János; Csiszovszki, Zsolt; Svenningsen, Sine Lo; Sneppen, Kim; Krishna, Sandeep; Semsey, Szabolcs

    2011-09-01

    Optimal response to environmental stimuli often requires activation of certain genes and repression of others. Dual function regulatory proteins play a key role in the differential regulation of gene expression. While repression can be achieved by any DNA binding protein through steric occlusion of RNA polymerase in the promoter region, activation often requires a surface on the regulatory protein to contact RNAP and thus facilitate transcription initiation. RNAP itself is also a DNA binding protein, therefore it can function as a transcriptional repressor. Searching the Escherichia coli promoter database we found that ∼14% of the identified 'forward' promoters overlap with a promoter oriented in the opposite direction. In this article we combine a mathematical model with experimental analysis of synthetic regulatory regions to investigate interference of overlapping promoters. We find that promoter interference depends on the characteristics of overlapping promoters. The model predicts that promoter strength and interference can be regulated separately, which provides unique opportunities for regulation. Our experimental data suggest that in principle any DNA binding protein can be used for both activation and repression of promoter transcription, depending on the context. These findings can be exploited in the construction of synthetic networks. PMID:21609952