Science.gov

Sample records for ocean perch sebastes

  1. Fate of a perched crystal layer in a magma ocean

    NASA Technical Reports Server (NTRS)

    Morse, S. A.

    1992-01-01

    The pressure gradients and liquid compressibilities of deep magma oceans should sustain the internal flotation of native crystals owing to a density crossover between crystal and liquid. Olivine at upper mantle depths near 250 km is considered. The behavior of a perched crystal layer is part of the general question concerning the fate of any transient crystal carried away from a cooling surface, whether this be a planetary surface or the roof of an intrusive magma body. For magma bodies thicker than a few hundred meters at modest crustal depths, the major cooling surface is the roof even when most solidification occurs at the floor. Importation of cool surroundings must also be invoked for the generation of a perched crystal layer in a magma ocean, but in this case the perched layer is deeply embedded in the hot part of the magma body, and far away from any cooling surface. Other aspects of this study are presented.

  2. 75 FR 53873 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-02

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Vessels Participating in the Rockfish Entry Level Fishery...: NMFS is prohibiting directed fishing for Pacific ocean perch for vessels participating in the rockfish... to prevent exceeding the 2010 total allowable catch (TAC) of Pacific ocean perch allocated to...

  3. Chemical and nutritional properties of Pacific Ocean Perch (Sebastes alutus) whole fish and by-products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The objective of this study was to chemically characterize POP and its by-products. Triplicate samples of fresh POP whole fish, heads, frames and viscera were obtained from a commercial processor in Alaska and analyzed. The lipid and protein contents of the POP samples were 7.8% and 17.9% for whole ...

  4. 75 FR 42338 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-21

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting retention of Pacific ocean perch in the... allowable catch (TAC) of Pacific ocean perch in the Western Regulatory Area of the GOA has been...

  5. 75 FR 53608 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-01

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat District of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... the 2010 total allowable catch (TAC) of Pacific ocean perch in the West Yakutat District of the...

  6. 76 FR 45709 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-01

    ... Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat District of the... for Pacific ocean perch in the West Yakutat District of the Gulf of Alaska (GOA). This action is necessary to prevent exceeding the 2011 total allowable catch (TAC) of Pacific ocean perch in the...

  7. 77 FR 41332 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-13

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting retention of Pacific ocean perch in the... allowable catch (TAC) of Pacific ocean perch in the Western Regulatory Area of the GOA has been...

  8. 78 FR 64892 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-30

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and Aleutian Islands Management Area AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... exceeding the 2013 total allowable catch (TAC) of Pacific ocean perch in this area allocated to...

  9. 76 FR 68658 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-07

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea Subarea of the Bering Sea and Aleutian... is opening directed fishing for Pacific ocean perch in the Bering Sea subarea of the Bering Sea and... Pacific ocean perch specified for the Bering Sea subarea of the Bering Sea and Aleutian Islands...

  10. 75 FR 69598 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the Amendment 80 Limited Access Fishery in the...: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by vessels.... The 2010 Pacific ocean perch TAC specified for vessels participating in the Amendment 80...

  11. 78 FR 73110 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-12-05

    ... ocean perch (POP) in the Bering Sea subarea of the BSAI under Sec. 679.20(d)(1)(iii) (78 FR 13813, March... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea Subarea of the Bering Sea and Aleutian... directed fishing for Pacific ocean perch in the Bering Sea subarea of the Bering Sea and Aleutian...

  12. 75 FR 69599 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the Amendment 80 Limited Access Fishery in the...: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by vessels.... The 2010 Pacific ocean perch TAC specified for vessels participating in the Amendment 80...

  13. 78 FR 64891 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-30

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and Aleutian Islands Management Area AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... exceeding the 2013 total allowable catch (TAC) of Pacific ocean perch in this area allocated to...

  14. 76 FR 39791 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-07

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... the 2011 total allowable catch (TAC) of Pacific ocean perch in the Western Regulatory Area of the...

  15. 76 FR 40838 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-12

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels Participating in the Rockfish Entry Level...; modification of a closure. SUMMARY: NMFS is opening directed fishing for Pacific ocean perch by trawl catcher... Pacific ocean perch for trawl catcher vessels participating in the rockfish entry level fishery in...

  16. 75 FR 69600 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Eastern Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Eastern Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Eastern Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2010 allocation of Pacific ocean perch in this...

  17. 77 FR 34262 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-11

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Western Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2012 allocation of Pacific ocean perch in this...

  18. 76 FR 43933 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-22

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Western Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2011 allocation of Pacific ocean perch in this...

  19. 75 FR 69601 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Central Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Central Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Central Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2010 allocation of Pacific ocean perch in this...

  20. 76 FR 39792 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch, Northern Rockfish, and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-07

    ... Economic Zone Off Alaska; Pacific Ocean Perch, Northern Rockfish, and Pelagic Shelf Rockfish in the Western...; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch, northern rockfish, and... exceeding the ] 2011 sideboard limits of Pacific ocean perch, northern rockfish, and pelagic shelf...

  1. 76 FR 54716 - Fisheries of the Exclusive Economic Zone off Alaska; Northern Rockfish, Pacific Ocean Perch, and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-02

    ... Economic Zone off Alaska; Northern Rockfish, Pacific Ocean Perch, and Pelagic Shelf Rockfish for Vessels... prohibiting directed fishing for northern rockfish, Pacific ocean perch, and pelagic shelf rockfish for... northern rockfish, Pacific ocean perch, and pelagic shelf rockfish allocated to vessels participating...

  2. 75 FR 69601 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Western Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2010 allocation of Pacific ocean perch in this...

  3. 77 FR 39440 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Central Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-03

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Central Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Central Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2012 allocation of Pacific ocean perch in this...

  4. 78 FR 42718 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-17

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea and Aleutian Islands Management Area AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... exceeding the 2013 total allowable catch (TAC) of Pacific ocean perch in this area allocated to...

  5. 75 FR 43090 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western Yakutat...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-23

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Yakutat District of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by... appear at subpart H of 50 CFR part 600 and 50 CFR part 679. The 2010 Pacific ocean perch sideboard...

  6. 75 FR 39183 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-08

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... the 2010 total allowable catch (TAC) of Pacific ocean perch in the Western Regulatory Area of the...

  7. 76 FR 65972 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Eastern Aleutian...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-25

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Eastern Aleutian District of the Bering Sea and... directed fishing for Pacific ocean perch in the Eastern Aleutian District of the Bering Sea and Aleutian... action is necessary to prevent exceeding the 2011 allocation of Pacific ocean perch in this...

  8. 77 FR 39649 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-05

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... the 2012 total allowable catch (TAC) of Pacific ocean perch in the Western Regulatory Area of the...

  9. 78 FR 39631 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Western...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-02

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Western Regulatory Area of the Gulf of Alaska AGENCY.... ACTION: Temporary rule; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch in... the 2013 total allowable catch of Pacific ocean perch in the Western Regulatory Area of the GOA....

  10. 77 FR 65838 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-31

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea Subarea of the Bering Sea and Aleutian... directed fishing for Pacific ocean perch in the Bering Sea subarea of the Bering Sea and Aleutian Islands management area. This action is necessary to fully use the 2012 total allowable catch of Pacific ocean...

  11. 76 FR 46207 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-02

    ...NMFS is opening directed fishing for Pacific ocean perch by trawl catcher vessels participating in the rockfish entry level fishery in the Central Regulatory Area of the Gulf of Alaska (GOA) for 48 hours. This action is necessary to fully use the 2011 directed fishing allowance of Pacific ocean perch for trawl catcher vessels participating in the rockfish entry level fishery in the Central......

  12. 75 FR 38938 - Fisheries of the Exclusive Economic Zone Off Alaska; Northern Rockfish, Pacific Ocean Perch, and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-07

    ... Economic Zone Off Alaska; Northern Rockfish, Pacific Ocean Perch, and Pelagic Shelf Rockfish for Catcher... northern rockfish, Pacific ocean perch, and pelagic shelf rockfish for catcher vessels participating in the... necessary to prevent exceeding the 2010 total allowable catch (TAC) of northern rockfish, Pacific...

  13. 75 FR 41999 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-20

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels Participating in the Rockfish Entry Level...; modification of closure. SUMMARY: NMFS is reopening directed fishing for Pacific ocean perch by trawl catcher... Alaska (GOA). This action is necessary to fully use the 2010 directed fishing allowance of Pacific...

  14. 76 FR 39790 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-07

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels Participating in the Rockfish Entry Level...; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by trawl catcher vessels...). This action is necessary ] to prevent exceeding the 2011 directed fishing allowance of Pacific...

  15. 75 FR 38936 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-07

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher Vessels Participating in the Rockfish Entry Level...; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by trawl catcher vessels...). This action is necessary to prevent exceeding the 2010 directed fishing allowance of Pacific...

  16. 75 FR 68726 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-09

    ...NMFS is opening directed fishing for Pacific ocean perch in the Bering Sea subarea of the Bering Sea and Aleutian Islands management area. This action is necessary to fully use the 2010 total allowable catch of Pacific ocean perch specified for the Bering Sea subarea of the Bering Sea and Aleutian Islands management...

  17. 76 FR 43934 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher/Processors...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-22

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher/Processors Participating in the Rockfish Limited...; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by catcher/processors...). This action is necessary to prevent exceeding the 2011 total allowable catch (TAC) of Pacific...

  18. 77 FR 42439 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-19

    ...NMFS is prohibiting directed fishing for Pacific ocean perch in the West Yakutat District of the Gulf of Alaska (GOA). This action is necessary to prevent exceeding the 2012 total allowable catch (TAC) of Pacific ocean perch in the West Yakutat District of the...

  19. 76 FR 70665 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-15

    ... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea Subarea of the Bering Sea and Aleutian...) of Pacific ocean perch in the Bering Sea subarea was established as 4,854 metric tons (mt) by the final 2011 and 2012 harvest specifications for groundfish of the BSAI (76 FR 11139, March 1, 2011)....

  20. 75 FR 42337 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch for Catcher/Processors...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-21

    ... Economic Zone Off Alaska; Pacific Ocean Perch for Catcher/Processors Participating in the Rockfish Limited...; closure. SUMMARY: NMFS is prohibiting directed fishing for Pacific ocean perch by catcher/processors...). This action is necessary to prevent exceeding the 2010 total allowable catch (TAC) of Pacific...

  1. 76 FR 39793 - Fisheries of the Exclusive Economic Zone Off Alaska; Northern Rockfish, Pacific Ocean Perch, and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-07

    ... Economic Zone Off Alaska; Northern Rockfish, Pacific Ocean Perch, and Pelagic Shelf Rockfish for Catcher... northern rockfish, Pacific ocean perch, and pelagic shelf rockfish for catcher vessels participating in the... necessary to prevent exceeding the 2011 total allowable catch (TAC) of northern rockfish, Pacific...

  2. 75 FR 69361 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-12

    ... groundfish in the BSAI (75 FR 11778, March 12, 2010). The harvest specification for the 2010 Pacific ocean... Economic Zone Off Alaska; Pacific Ocean Perch in the Bering Sea Subarea of the Bering Sea and Aleutian... 2011 harvest specifications for groundfish of the BSAI (75 FR 11778, March 12, 2010). In...

  3. 75 FR 69599 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-15

    ... the final 2010 and 2011 harvest specifications for groundfish in the BSAI (75 FR 11778, March 12, 2010... Economic Zone Off Alaska; Pacific Ocean Perch by Vessels in the Amendment 80 Limited Access Fishery in the... participating in the Amendment 80 limited access fishery in the Western Aleutian District of the Bering Sea...

  4. Genetic structure and different color morphotypes suggest the occurrence and bathymetric segregation of two incipient species of Sebastes off Argentina

    NASA Astrophysics Data System (ADS)

    Venerus, Leonardo A.; Ciancio, Javier E.; Riva-Rossi, Carla; Gilbert-Horvath, Elizabeth A.; Gosztonyi, Atila E.; Garza, John Carlos

    2013-07-01

    Rockfishes of the genus Sebastes are extensively distributed in the Pacific and Atlantic oceans. Although the occurrence of two morphologically similar species in the Southern Hemisphere, Sebastes oculatus and Sebastes capensis, is now clearly established, the taxonomic status and phylogeographic patterns for the genus in the region have not yet been completely resolved. In this study, we provide new insights into the taxonomy and evolutionary relationships of rockfishes inhabiting the Southwestern Atlantic Ocean, off the coast of mainland Argentina, by combining mitochondrial DNA (mtDNA) control region sequences, microsatellite data, and color pattern analyses. Differences in coloration ("dark" and "light" fish) together with bathymetric segregation between color morphotypes were evident from fish collection and literature review. In addition, the mtDNA phylogenetic analysis and Bayesian clustering analysis using microsatellite data separated the fish into two distinct groups ( F ST = 0.041), most likely representing incipient species. Our results suggest that speciation-by-depth in the absence of physical barriers could be a widespread mechanism of speciation in Sebastes from both the Northern and Southern Hemispheres. Nevertheless, the degree of genetic differentiation found, added to the large number of individuals displaying high levels of admixture, points to the occurrence of incomplete reproductive barriers between color morphotypes. Beyond the taxonomic and phylogeographic implications of our findings, the occurrence of distinct groups of Sebastes off the coast of Argentina being targeted by different fisheries (angling and trawling) has consequences for the design and implementation of appropriate fishery regulations to avoid overharvest of either group.

  5. Genomic characterization of sex-identification markers in Sebastes carnatus and Sebastes chrysomelas rockfishes.

    PubMed

    Fowler, Benjamin L S; Buonaccorsi, Vincent P

    2016-05-01

    Fish have evolved a variety of sex-determining (SD) systems including male heterogamy (XY), female heterogamy (ZW) and environmental SD. Little is known about SD mechanisms of Sebastes rockfishes, a highly speciose genus of importance to evolutionary and conservation biology. Here, we characterize the sex determination system in the sympatrically distributed sister species Sebastes chrysomelas and Sebastes carnatus. To identify sex-specific genotypic markers, double digest restriction site - associated DNA sequencing (ddRAD-seq) of genomic DNA from 40 sexed individuals of both species was performed. Loci were filtered for presence in all of the individuals of one sex, absence in the other sex and no heterozygosity. Of the 74 965 loci present in all males, 33 male-specific loci met the criteria in at least one species and 17 in both. Conversely, no female-specific loci were detected, together providing evidence of an XY sex determination system in both species. When aligned to a draft reference genome from Sebastes aleutianus, 26 sex-specific loci were interspersed among 1168 loci that were identical between sexes. The nascent Y chromosome averaged 5% divergence from the X chromosome and mapped to reference Sebastes genome scaffolds totalling 6.9Mbp in length. These scaffolds aligned to a single chromosome in three model fish genomes. Read coverage differences were also detected between sex-specific and autosomal loci. A PCR-RFLP assay validated the bioinformatic results and correctly identified sex of five additional individuals of known sex. A sex-determining gene in other teleosts gonadal soma-derived factor (gsdf) was present in the model fish chromosomes that spanned our sex-specific markers. PMID:26923740

  6. Sea Perch Project

    NASA Technical Reports Server (NTRS)

    2010-01-01

    David Lalejini, an employee of the Naval Research Laboratory at NASA's John C. Stennis Space Center, helps a pair of teachers deploy a remotely-operated underwater Sea Perch robot during workshop activities Dec. 11. The Stennis Education Office teamed with Naval Research Laboratory counterparts to conduct a two-day workshop Dec. 10-11 for Louisiana and Mississippi teachers. During the no-cost workshop, teachers learned to build and operate Sea Perch robots. The teachers now can take the Sea Perch Program back to students.

  7. Age validation of quillback rockfish (Sebastes maliger) using bomb radiocarbon

    SciTech Connect

    Kerr, L A; Andrews, A H; Munk, K; Coale, K H; Frantz, B R; Cailliet, G M; Brown, T A

    2005-01-05

    Rockfishes (Sebastes spp.) support one of the most economically important fisheries of the Pacific Northwest and it is essential for sustainable management that age estimation procedures be validated for these species. Atmospheric testing of thermonuclear devices during the 1950s and 1960s created a global radiocarbon ({sup 14}C) signal in the ocean environment that scientists have identified as a useful tracer and chronological marker in natural systems. In this study, we first demonstrated that fewer samples are necessary for age validation using the bomb-generated {sup 14}C signal by emphasizing the utility of the time-specific marker created by the initial rise of bomb-{sup 14}C. Second, the bomb-generated {sup 14}C signal retained in fish otoliths was used to validate the age and age estimation methodology of the quillback rockfish (Sebastes maliger) in the waters of southeast Alaska. Radiocarbon values from the first year's growth of quillback rockfish otoliths were plotted against estimated birth year producing a {sup 14}C time series spanning 1950 to 1985. The initial rise of bomb-{sup 14}C from pre-bomb levels ({approx} -90 {per_thousand}) occurred in 1959 {+-} 1 year and {sup 14}C levels rose relatively rapidly to peak {Delta}{sup 14}C values in 1967 (+105.4 {per_thousand}), with a subsequent declining trend through the end of the record in 1985 (+15.4 {per_thousand}). The agreement between the year of initial rise of {sup 14}C levels from the quillback rockfish record and the chronometer determined for the waters of southeast Alaska from yelloweye rockfish (S. ruberrimus) otoliths validated the ageing methodology for the quillback rockfish. The concordance of the entire quillback rockfish {sup 14}C record with the yelloweye rockfish time series demonstrated the effectiveness of this age validation technique, confirmed the longevity of the quillback rockfish up to a minimum of 43 years, and strongly supports higher age estimates of up to 90 years.

  8. Dynamics of a parasite assemblage of the Vermilion Rockfish Sebastes miniatus from northwestern Baja California, México

    NASA Astrophysics Data System (ADS)

    Rodríguez-Santiago, M. A.; Rosales-Casián, J. A.; Grano-Maldonado, M. I.

    2014-06-01

    A parasite assemblage of Sebastes miniatus from northwestern Baja California, México, was composed of a total of 12 species: five ectoparasites (two monogeneans and three parasitic copepods) and seven endoparasites (two digeneans, one cestode, three nematodes, and one acanthocephala). Five of these parasites constituted new genera records to the genus Sebastes, and nine were new geographic records. The most abundant species were the endoparasites Parabothriocephalus sagitticeps, Hysterothylacium sp., and Anisakis sp., and the specific richness ranged from 1 to 8 parasite species per host. The most important parasite species in terms of prevalence were Microcotyle sebastis (93 %) and Anisakis sp. (92 %). The mean abundance of parasites found in S. miniatus showed significant variations over the year, with maximum values (31.7 individuals/host) in August, and minimum (0.39 individuals/host) in February. P. sagitticeps showed the highest mean intensity of infection (190.4 parasites/host), followed by Anisakis sp. (127.2 parasites/host) and Hysterothylacium sp. (46.6 parasites/host). The presence of larval stages of the nematodes Anisakis, Pseudoterranova, and Hysterothylacium is particularly important due to their high abundance and prevalence and because they may represent a human health risk (anisakiasis). Rockfishes (family Scorpaenidae) of the genus Sebastes constitute one of the most important groundfish resources in the American and Mexican northern Pacific Ocean, both for recreational and for the commercial fisheries of California and Baja California. These rockfish species makes up a substantial part of the Mexican cuisine.

  9. Complete mitochondrial genome of Sebastes taczanowskii (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea.

    PubMed

    Jang, Yo-Soon; Kim, Sung; Kim, Ki-Yong; Park, Jeong-Ho

    2016-09-01

    Sebastes taczanowskii is a subarctic species in the north-western Pacific Ocean. To obtain mitochondrial DNA sequences for phylogeny, the complete mitogenome (16 452 bp in length) of S. taczanowskii was constructed using next-generation sequencing. The circular mitogenome contains 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and the control region, for which gene structure and positions were similar to those of other Scorpaenidae. The complete mitogenome composed of 27.8% A, 26.5% T, 17.3% G and 28.5% C, with a slight AT bias (54.3%). All PCGs use a typical start codon, ATG, except COX1 (GTG). The terminal codon of PCGs was mainly TAR, with the exceptions of ND4 (AGA) and Cytb (incomplete codon, T). Sebastes taczanowskii was clearly divided from other Scorpaenidae in the phylogenetic tree using 2 rRNA and 13 PCGs. The mitogenome of S. taczanowskii can be useful for constructing the molecular phylogenetic tree within Scorpaenidae. PMID:26273922

  10. Variation in habitat use by juvenile Acadian redfish, Sebastes fasciatus

    USGS Publications Warehouse

    Auster, P.J.; Lindholm, J.; Valentine, P.C.

    2003-01-01

    A basic paradigm in behavioral ecology is that organisms expand their distribution as preferred sites become saturated with individuals that reduce the availability of resources (e.g., shelter, prey) on a per capita basis. Previous fish community studies at Stellwagen Bank National Marine Sanctuary have shown that juvenile Acadian redfish Sebastes fasciatus (20 cm TL) also occurred in dense cerianthid habitats. Two explanations for these distributions can be advanced. The simplest is that redfish use both boulder and cerianthid habitats on an encounter basis, regardless of habitat saturation or predation pressure. Alternatively, boulder reefs serve as recruitment habitats and cerianthid habitats serve as a conduit for redfish moving away from saturated boulder reef sites, essentially serving as elements of a 'redfish pump'.

  11. Food of white perch, rock bass and yellow perch in eastern Lake Ontario

    USGS Publications Warehouse

    Elrod, Joseph H.; Busch, Wolf-Dieter N.; Griswold, Bernard L.; Schneider, Clifford P.; Wolfert, David R.

    1981-01-01

    The contents of stomachs from 1,485 white perch, 218 rock bass and 1,399 yellow perch collected in eastern Lake Ontario from May to October in 1972 and in May 1973 were examined. All three species fed primarily on amphipods, but they also ate chironomids and trichopterans regularly. Rock bass ate more trichopterans than chironomids, whereas white perch and yellow perch ate more chironomids. Snails and crayfish were significant items in the diet of rock bass, but occurred infrequently in stomachs of white perch and yellow perch. White perch and yellow perch frequently ate fish eggs during early summer, but rock bass seldom ate fish eggs. Fish were important in the diets of white perch longer than 300 millimeters and rock bass and yellow perch longer than 200 millimeters. Similarities in the diets of fish 1 year old or older suggest that the potential for competition between white perch and yellow perch is greater than that between rock bass and either white perch or yellow perch.

  12. A microsatellite genetic linkage map of black rockfish ( Sebastes schlegeli)

    NASA Astrophysics Data System (ADS)

    Chu, Guannan; Jiang, Liming; He, Yan; Yu, Haiyang; Wang, Zhigang; Jiang, Haibin; Zhang, Quanqi

    2014-12-01

    Ovoviviparous black rockfish ( Sebastes schlegeli) is an important marine fish species for aquaculture and fisheries in China. Genetic information of this species is scarce because of the lack of microsatellite markers. In this study, a large number of microsatellite markers of black rockfish were isolated by constructing microsatellite-enriched libraries. Female- and male-specific genetic linkage maps were constructed using 435 microsatellite markers genotyped in a full-sib family of the fish species. The female linkage map contained 140 microsatellite markers, in which 23 linkage groups had a total genetic length of 1334.1 cM and average inter-marker space of 13.3 cM. The male linkage map contained 156 microsatellite markers, in which 25 linkage groups had a total genetic length of 1359.6 cM and average inter-marker distance of 12.4 cM. The genome coverage of the female and male linkage maps was 68.6% and 69.3%, respectively. The female-to-male ratio of the recombination rate was approximately 1.07:1 in adjacent microsatellite markers. This paper presents the first genetic linkage map of microsatellites in black rockfish. The collection of polymorphic markers and sex-specific linkage maps of black rockfish could be useful for further investigations on parental assignment, population genetics, quantitative trait loci mapping, and marker-assisted selection in related breeding programs.

  13. Influence of perched groundwater on base flow

    USGS Publications Warehouse

    Niswonger, R.G.; Fogg, G.E.

    2008-01-01

    Analysis with a three-dimensional variably saturated groundwater flow model provides a basic understanding of the interplay between streams and perched groundwater. A simplified, layered model of heterogeneity was used to explore these relationships. Base flow contribution from perched groundwater was evaluated with regard to varying hydrogeologic conditions, including the size and location of the fine-sediment unit and the hydraulic conductivity of the fine-sediment unit and surrounding coarser sediment. Simulated base flow was sustained by perched groundwater with a maximum monthly discharge in excess of 15 L/s (0.6 feet3/s) over the length of the 2000-m stream reach. Generally, the rate of perched-groundwater discharge to the stream was proportional to the hydraulic conductivity of sediment surrounding the stream, whereas the duration of discharge was proportional to the hydraulic conductivity of the fine-sediment unit. Other aspects of the perched aquifer affected base flow, such as the depth of stream penetration and the size of the fine-sediment unit. Greater stream penetration decreased the maximum base flow contribution but increased the duration of contribution. Perched groundwater provided water for riparian vegetation at the demand rate but reduced the duration of perched-groundwater discharge nearly 75%. Copyright 2008 by the American Geophysical Union.

  14. Age validation of canary rockfish (Sebastes pinniger) using two independent otolith techniques: lead-radium and bomb radiocarbon dating.

    SciTech Connect

    Andrews, A H; Kerr, L A; Cailliet, G M; Brown, T A; Lundstrom, C C; Stanley, R D

    2007-11-04

    Canary rockfish (Sebastes pinniger) have long been an important part of recreational and commercial rockfish fishing from southeast Alaska to southern California, but localized stock abundances have declined considerably. Based on age estimates from otoliths and other structures, lifespan estimates vary from about 20 years to over 80 years. For the purpose of monitoring stocks, age composition is routinely estimated by counting growth zones in otoliths; however, age estimation procedures and lifespan estimates remain largely unvalidated. Typical age validation techniques have limited application for canary rockfish because they are deep dwelling and may be long lived. In this study, the unaged otolith of the pair from fish aged at the Department of Fisheries and Oceans Canada was used in one of two age validation techniques: (1) lead-radium dating and (2) bomb radiocarbon ({sup 14}C) dating. Age estimate accuracy and the validity of age estimation procedures were validated based on the results from each technique. Lead-radium dating proved successful in determining a minimum estimate of lifespan was 53 years and provided support for age estimation procedures up to about 50-60 years. These findings were further supported by {Delta}{sup 14}C data, which indicated a minimum estimate of lifespan was 44 {+-} 3 years. Both techniques validate, to differing degrees, age estimation procedures and provide support for inferring that canary rockfish can live more than 80 years.

  15. A new record of Sebastes koreanus from China based on morphological characters and DNA barcoding

    NASA Astrophysics Data System (ADS)

    Fang, Yalu; Kai, Yoshiaki; Yanagimoto, Takashi; Song, Na; Gao, Tianxiang

    2015-05-01

    A new record of Sebastes koreanus (Kim and Lee, 1994) was documented based on morphological characters and DNA barcoding. Fifty-six Sebastes specimens were collected from the coastal waters of northern China. Samples were identified as S. koreanus based on morphological characters. The coloration and morphometric measurements were consistent with those described from specimens collected in South Korea. In this study, specimens had the following morphological characteristics: light brown body with dark stripes and tiny dark spots, 4-5 wide indistinct vertical patterns on the side, 2 radial stripes behind and below the eyes, 1 large dark blotch on the opercle. Additionally, the following meristic characters were recorded: dorsal fin XIV-13, pectoral fin 16, anal fin III-6-7, pelvic fin I-5, lateral line scales 29-30, and vertebrae 26. The fragment of cytochrome oxidase subunit I ( COI) gene of mitochondrial DNA was sequenced for phylogenetic analysis. The mean genetic distance within the species was 0.3%. Net genetic distances between S. koreanus and other Sebastes species ranged from 3.1% to 7.6%, which was greater than the threshold for species delimitation. The phylogenetic analysis strongly supports the validity of S. koreanus in China at the genetic level. The origion, evolution, patterns of speciation and unique features in genome divergence among primate lineages of this species still need future directions of research.

  16. Improving Growth in Yellow Perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Given that the role of the somatotropic axis (e.g. growth hormone and insulin-like growth factor I) in yellow perch growth is uniquely unresolved, and the interplay of sex steroids with the somatotropic axis unknown, research efforts are focused in this area. To accomplish this, we will isolate and...

  17. Radiocarbon in otoliths of yelloweye rockfish (Sebastes ruberrimus): a reference time series for the coastal waters of southeast Alaska

    SciTech Connect

    Kerr-Ferrey, L A; Andrews, A H; Frantz, B R; Coale, K H; Brown, T A; Cailliet, G M

    2003-10-14

    Atmospheric testing of thermonuclear devices during the 1950s and 1960s created a global radiocarbon ({sup 14}C) signal in the environment that has provided a useful tracer and chronological marker in oceanic systems and organisms. The bomb-generated {sup 14}C signal retained in fish otoliths can be used as a permanent, time-specific recorder of the 14C present in ambient seawater, making it a useful tool in age validation of fishes. The goal of this study was to determine {sup 14}C levels in otoliths of the age-validated yelloweye rockfish (Sebastes ruberrimus) to establish a reference time series for the coastal waters of southeast Alaska. Radiocarbon values from the first year's growth of 43 yelloweye rockfish otoliths were plotted against estimated birth year to produce a 14C time series for these waters spanning 1940 to 1990. The time series shows the initial rise of bomb 14C occurred in 1958 in coastal southeast Alaskan waters and {sup 14}C levels rose relatively rapidly to peak {Delta}{sup 14}C values (60-70%) between 1966 and 1971, with a subsequent declining trend through the end of the record in 1990 (-3.2%). In addition, the radiocarbon data, independent of the radiometric study, confirms the longevity of the yelloweye rockfish up to a minimum of 44 years and strongly supports higher age estimates. The yelloweye rockfish record provides a {sup 14}C chronology that will be useful for the interpretation of {sup 14}C accreted in biological samples from these waters and in future rockfish age validation studies.

  18. Movements of Blue Rockfish (Sebastes mystinus) off Central California with Comparisons to Similar Species

    PubMed Central

    Green, Kristen M.; Greenley, Ashley P.; Starr, Richard M.

    2014-01-01

    Olive (Sebastes serranoides), black (Sebastes melanops), and blue rockfish (Sebastes mystinus) are all common inhabitants of nearshore ecosystems on the West coast of North America and important components of the recreational fishery off California. Acoustic monitoring studies indicate that olive rockfish are highly residential and that black rockfish are capable of long migrations and have less site fidelity; yet little is known about the long-term movements of blue rockfish. External tag-recapture studies indicate that blue rockfish may have intermediate movements relative to these congener nearshore species. To better understand the site fidelity, and daily and seasonal movements of blue rockfish over long (>1-year) time scales, we placed acoustic transmitters into 21 adult blue rockfish (30–41 cm total length) in Carmel Bay, California. Blue rockfish displayed intermediate movement patterns and residency relative to other similar kelp forest rockfish species. Two-thirds of tagged blue rockfish (13 fish) exhibited high residency to the study area (>12 mo). When in residence, mean home range of blue rockfish was 0.23 km2, however as many as 30% of tagged blue rockfish shifted their core home range area during the study. Most shifts in home range occurred during upwelling season, and tagged fish moved up to 3.1 km when in residence. Blue rockfish with short residence times were last detected in the study area in late winter and early spring. Blue rockfish were observed at shallower depths during day than night, likely indicative of diurnal feeding. However, over longer time scales, blue rockfish were detected at deeper depths during upwelling periods and with increased wave heights. Daily and seasonal vertical movements of blue rockfish may be influenced by upwelling conditions and local prey abundance. PMID:24902049

  19. Perch use by laying hens in a commercial aviary.

    PubMed

    Campbell, D L M; Makagon, M M; Swanson, J C; Siegford, J M

    2016-08-01

    Non-cage housing systems, such as the aviary, are being implemented by the laying hen industry, including in North America, in an attempt to improve the welfare of hens. Perches are a resource that is consistently included in aviaries. Hens are strongly motivated to perch, and perching can improve leg bone strength. However, hens may prefer elevated perches, particularly at night, and thus simply providing perches is not enough to improve welfare; they must be provided in a way that allows all hens to access them. Observations of laying hens using perches and ledges (flat, solid metal shelves to assist hens' movement between tiers) in a commercial aviary revealed variation in where hens roosted within the tiered aviary enclosure across the flock cycle (peak, mid and end of lay; P < 0.001 for all age points). Hens most often preferred roosting in the highest enclosure levels, leading to crowding on upper perches and ledges while perch space remained available on lower levels. Restricted access to preferable perches may cause frustration in hens, leading to welfare issues. Hens roosted more on perches at peak lay than mid and end lay (P < 0.001) but roosted less on ledges at peak lay than mid and end lay (P < 0.001). Additionally, more hens roosted on both perches and ledges in the 'dark' observation period compared with the number of hens roosting during the 'light' observation period (P < 0.001). Further research should look at all structural elements within the system that are used by hens for roosting, such as edges of tiers and upper wire floors, to evaluate how changes in perching preferences across the lay cycle may correlate with system design and bird-based parameters. PMID:26994206

  20. Perch use by laying hens in a commercial aviary1

    PubMed Central

    Campbell, D. L. M.; Makagon, M. M.; Swanson, J. C.; Siegford, J. M.

    2016-01-01

    Non-cage housing systems, such as the aviary, are being implemented by the laying hen industry, including in North America, in an attempt to improve the welfare of hens. Perches are a resource that is consistently included in aviaries. Hens are strongly motivated to perch, and perching can improve leg bone strength. However, hens may prefer elevated perches, particularly at night, and thus simply providing perches is not enough to improve welfare; they must be provided in a way that allows all hens to access them. Observations of laying hens using perches and ledges (flat, solid metal shelves to assist hens’ movement between tiers) in a commercial aviary revealed variation in where hens roosted within the tiered aviary enclosure across the flock cycle (peak, mid and end of lay; P < 0.001 for all age points). Hens most often preferred roosting in the highest enclosure levels, leading to crowding on upper perches and ledges while perch space remained available on lower levels. Restricted access to preferable perches may cause frustration in hens, leading to welfare issues. Hens roosted more on perches at peak lay than mid and end lay (P < 0.001) but roosted less on ledges at peak lay than mid and end lay (P < 0.001). Additionally, more hens roosted on both perches and ledges in the ‘dark’ observation period compared with the number of hens roosting during the ‘light’ observation period (P < 0.001). Further research should look at all structural elements within the system that are used by hens for roosting, such as edges of tiers and upper wire floors, to evaluate how changes in perching preferences across the lay cycle may correlate with system design and bird-based parameters. PMID:26994206

  1. Field Verification of Stable Perched Groundwater in Layered Bedrock Uplands

    USGS Publications Warehouse

    Carter, J.T.; Gotkowitz, M.B.; Anderson, M.P.

    2011-01-01

    Data substantiating perched conditions in layered bedrock uplands are rare and have not been widely reported. Field observations in layered sedimentary bedrock in southwestern Wisconsin, USA, provide evidence of a stable, laterally extensive perched aquifer. Data from a densely instrumented field site show a perched aquifer in shallow dolomite, underlain by a shale-and-dolomite aquitard approximately 25 m thick, which is in turn underlain by sandstone containing a 30-m-thick unsaturated zone above a regional aquifer. Heads in water supply wells indicate that perched conditions extend at least several kilometers into hillsides, which is consistent with published modeling studies. Observations of unsaturated conditions in the sandstone over a 4-year period, historical development of the perched aquifer, and perennial flow from upland springs emanating from the shallow dolomite suggest that perched groundwater is a stable hydrogeologic feature under current climate conditions. Water-table hydrographs exhibit apparent differences in the amount and timing of recharge to the perched and regional flow systems; steep hydraulic gradients and tritium and chloride concentrations suggest there is limited hydraulic connection between the two. Recognition and characterization of perched flow systems have practical importance because their groundwater flow and transport pathways may differ significantly from those in underlying flow systems. Construction of multi-aquifer wells and groundwater withdrawal in perched systems can further alter such pathways. ?? 2010 The Author(s). Journal compilation ?? 2010 National Ground Water Association.

  2. Field verification of stable perched groundwater in layered bedrock uplands.

    PubMed

    Carter, Jonathon T V; Gotkowitz, Madeline B; Anderson, Mary P

    2011-01-01

    Data substantiating perched conditions in layered bedrock uplands are rare and have not been widely reported. Field observations in layered sedimentary bedrock in southwestern Wisconsin, USA, provide evidence of a stable, laterally extensive perched aquifer. Data from a densely instrumented field site show a perched aquifer in shallow dolomite, underlain by a shale-and-dolomite aquitard approximately 25 m thick, which is in turn underlain by sandstone containing a 30-m-thick unsaturated zone above a regional aquifer. Heads in water supply wells indicate that perched conditions extend at least several kilometers into hillsides, which is consistent with published modeling studies. Observations of unsaturated conditions in the sandstone over a 4-year period, historical development of the perched aquifer, and perennial flow from upland springs emanating from the shallow dolomite suggest that perched groundwater is a stable hydrogeologic feature under current climate conditions. Water-table hydrographs exhibit apparent differences in the amount and timing of recharge to the perched and regional flow systems; steep hydraulic gradients and tritium and chloride concentrations suggest there is limited hydraulic connection between the two. Recognition and characterization of perched flow systems have practical importance because their groundwater flow and transport pathways may differ significantly from those in underlying flow systems. Construction of multi-aquifer wells and groundwater withdrawal in perched systems can further alter such pathways. PMID:21671502

  3. New technology turns wastes into revenue at Indiana perch farm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bell Aquaculture is vertically integrated and has closed the perch lifecycle within environmentally friendly land-based closed-containment systems. This means that Bell Aquaculture controls the broodstock, spawning, fry culture, grow-out, and 52 week per year harvest of the perch, plus the fish proc...

  4. The complete mitochondrial genome of Sebastes pachycephalus (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea.

    PubMed

    Jang, Yo-Soon; Park, Kwang-Jae; Kim, Ki-Yong; Kim, Sung

    2016-01-01

    Due to variations in coloration as well as other morphological features, the identification of Sebastes pachycephalus has been problematic. The complete mitogenome of S. pachycephalus was acquired using next-generation sequencing. The full genome was 16,415 base pairs (bp) in length, assembling two rRNAs, 22 tRNAs, one control region and 13 protein-coding genes (PCGs). The genome constitutes 27.9% A, 26.3% T, 17.2% G and 28.5% C, showing a slight AT bias (54.2%). All PCGs start with an ATG initial codon except COX1, which contains GTG. Most PCG stop codons were TAA, except for ND1 and ND3 (TAG) and Cytb (incomplete termination codon, T). All tRNAs showed the typical cloverleaf structure, except tRNA(Ser(AGY)), which lacks the DHU arm. The complete mitogenome of S. pachycephalus will help further identification and speciation analyses. PMID:24438257

  5. The complete mitochondrial genome of the oblong rockfish Sebastes oblongus (Scorpaenidae, Scorpaeniformes).

    PubMed

    Jang, Yo-Soon; Oh, Sung-Yong; Park, Kwang-Jae; Kim, Ki-Yong; Kim, Sung

    2016-01-01

    The complete mitogenome of the oblong rockfish Sebastes oblongus was constructed using next-generation sequencing. The full genome was 16,396 bp in length, including two rRNA, 22 tRNA, one control region and 13 protein-coding genes (PCGs). The genome consisted of 28.0% A, 26.4% T, 16.9% G and 28.6% C, showing a slight AT bias (54.4%). All PCGs contained an ATG start codon, excluding COX1 that contained a GTG. All PCGs contained the stop codon TAA, excluding ND3 (TAG stop codon) and Cytb (incomplete termination codon, T). All tRNAs contained the typical clover leaf structure, except for two tRNAs, serine (AGY) and threonine, which lacked the DHU arm. The complete mitogenome of S. oblongus will contribute to genetic analysis of the effective population size for aquaculture. PMID:24438255

  6. Lack of population genetic differentiation of a marine ovoviviparous fish Sebastes schlegelii in Northwestern Pacific.

    PubMed

    Zhang, Hui; Yanagimoto, Takashi; Zhang, Xiumei; Song, Na; Gao, Tianxiang

    2016-05-01

    Sebastes schlegelii is one of the fishes that aggregate around drifting seaweed during early development. To examine the population genetic structure of S. schlegelii, a 452-bp fragment of the mtDNA control region was sequenced and used to interpret life history characteristics and larval dispersal strategy. Two-hundred and twenty-one individuals from 13 sites across the entire range of S. schlegelii in China, Japan and Korea were analyzed. A neighbor-joining tree and network showed that there were no significant genealogical structures corresponding to sampling locations. AMOVA, pair-wise FST and exact test revealed no significant genetic differentiation among locations. The migration rate among locations was high based on the result of LAMARC. We conclude that larval dispersal with drifting seaweed and the current environmental factors may play an important role in shaping the contemporary phylogeographic pattern and genetic homogeneity of S. schlegelii. PMID:25269000

  7. Bathymetric-based habitat model for yelloweye rockfish (Sebastes ruberrimus) on Alaska's outer Kenai Peninsula

    NASA Astrophysics Data System (ADS)

    Mumm, Joshua D.

    Motivated primarily as part of a habitat-based stock assessment, we explored the feasibility of modeling yelloweye rockfish (Sebastes ruberrimus) habitat in Southcentral Alaska using high-resolution multibeam bathymetry. A generalized linear model was developed with bathymetrically derived terrain metrics (rugosity, slope, bathymetric position index, and distance-to-rock) as predictor variables. The model was parameterized and validated using remotely operated vehicle observations. When evaluated for the Chiswell Island training area, the model correctly classified 96.0% (n = 100) of a reserved set of presence/absence validation points (Cohen's Kappa = 0.92; AUC = 0.98). When evaluated for the independent Nuka Island testing area, the overall accuracy was 82.5% (n=332; Kappa = 0.65; AUC = 0.95). This study demonstrates that suitable yelloweye habitat can be modeled with reasonable accuracy using high-resolution multibeam bathymetry, and such a model is fairly portable among sites along the Kenai Peninsula's outer coast.

  8. Histopathological observation of lymphocystis disease and lymphocystis disease virus (LCDV) detection in cultured diseased Sebastes schlegeli

    NASA Astrophysics Data System (ADS)

    Sheng, Xiuzhen; Zhan, Wenbin; Xu, Songjuan; Cheng, Shunfeng

    2007-10-01

    Lymphocystis nodules occurring in the cultured sting fish Sebastes schlegeli were observed under light and electron microscope. Lymphocystis disease virus (LCDV) in the tissues of diseased fish was detected with indirect immunofluorescence test (IFAT). Results showed that lymphocystis cells had overly irregular nuclei, basophilic intracytoplasmic inclusion bodies with virions budding from the surface, and hyaline capsules outside the cell membrane. Numerous virus particles about 200 nm in diameter scattered in the cytoplasm, electron-dense particles 70 80 nm in diameter filled in perinuclear cisterna, and membrane-enveloped particles with electron-dense core of 70 80 nm appeared around cellular nucleus. IFAT using monoclonal antibody against LCDV from Paralichthys olivaceus revealed that specific green fluorescence was present in the cytoplasm of lymphocystis cells, epithelium of stomach, gill lamellae, and muscular fibers under epidermis of S. schlegeli, just as that in the cytoplasm of lymphocystis cells of P. olivaceus, suggesting the presence of LCDV in these tissues.

  9. 76 FR 70420 - Fisheries of the Pacific Region

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-14

    ... National Oceanic and Atmospheric Administration RIN 0648-XA801 Fisheries of the Pacific Region AGENCY... that NMFS, on behalf of the Secretary of Commerce (Secretary), has determined that Pacific ocean perch, (Sebastes alutus), which is managed by the Pacific Fishery Management Council, is in an overfished...

  10. A health assessment of high status Christian burials recovered from the Roman-Byzantine archeological site of Elaiussa Sebaste, Turkey.

    PubMed

    Paine, R R; Vargiu, R; Coppa, A; Morselli, C; Schneider, E E

    2007-01-01

    The purpose of this study is to assess the state of health of 116 individuals whose remains were excavated from Byzantine period burials underneath the floor of an important Christian basilica from the site of Elaiussa Sebaste, Turkey. Elaiussa Sebaste was a Mediterranean coastal community, which began as a Roman town and continued as an early Christian Byzantine community until the end of the 7th century AD. The burials date from the middle of the 6th through the middle of the 7th centuries AD. We attempt to determine how high social status has influenced the type and frequency of skeletal lesions exhibited in this sample. All strata of this population show a number of chronic and acute health problems as indicated by skeletal lesions. Yet, only the frequency of degenerative joint disease (DJD) differs by sex, with males exhibiting a higher rate of DJD than females, p=0.09. There is no difference in the frequency of trauma among adult males and females. Non-specific skeletal lesions (cribra orbitalia, porotic hyperostosis, and periostitis) often associated with dietary and general stressors, but also with specific systemic diseases, are common in both sexes. The sub-adults primarily exhibit periostitis of the long bones and do not show skeletal lesions specific to malaria. It seems that high social ranking did not prevent serious ailments from affecting the health of individuals living in the Elaiussa Sebaste community. PMID:17433326

  11. Reappraising factors affecting mourning dove perch coos

    USGS Publications Warehouse

    Sayre, M.W.; Atkinson, R.D.; Baskett, T.S.; Haas, G.H.

    1978-01-01

    Results confirmed pairing as the primary factor influencing perch-cooing rates of wild mourning doves (Zenaida macroura). Marked unmated males cooed at substantially higher rates (6.2x) than mated males, had greater probability of cooing (2.3x) during 3-minute periods, and continued cooing longer each morning than mated males. Population density was not a major factor affecting cooing. Unmated males cooed more frequently in the presence of other cooing doves (P < 0.05) than when alone, but the number of additional doves above 1 was unimportant. Cooing rates of both mated and unmated males on areas with dissimilar dove densities were not significantly different. Within limits of standard call-count procedure, weather exerted no detectable influence on cooing.

  12. A kingfisher perches on a branch

    NASA Technical Reports Server (NTRS)

    1999-01-01

    A belted kingfisher perches on a twig in the Merritt Island National Wildlife Refuge, which shares a boundary with the Kennedy Space Center. The pigeon-sized, blue-gray male is identified by the blue-gray breast band; females show a chestnut belly band. The belted kingfisher ranges throughout the United States and Canada, wintering south to Panama and the West Indies. They dive into the water for fish and may also take crabs, crayfish, salamanders, lizards, mice and insects. The 92,000-acre refuge is a habitat for more than 310 species of birds, 25 mammals, 117 fishes and 65 amphibians and reptiles. The marshes and open water of the refuge also provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds.

  13. Experimental analysis of perching in the European starling (Sturnus vulgaris: Passeriformes; Passeres), and the automatic perching mechanism of birds.

    PubMed

    Galton, Peter M; Shepherd, Jeffrey D

    2012-04-01

    The avian automatic perching mechanism (APM) involves the automatic digital flexor mechanism (ADFM) and the digital tendon-locking mechanism (DTLM). When birds squat on a perch to sleep, the increased tendon travel distance due to flexion of the knee and ankle supposedly causes the toes to grip the perch (ADFM) and engage the DTLM so perching while sleeping involves no muscular effort. However, the knees and ankles of sleeping European starlings (Sturnus vulgaris) are only slightly flexed and, except for occasional balancing adjustments, the distal two-thirds of the toes are not flexed to grip a 6-mm-diameter perch. The cranial ankle angle (CAA) is ∼120° and the foot forms an inverted "U" that, with the mostly unflexed toes, provides a saddle-like structure so the bird balances its weight over the central pad of the foot (during day weight further back and digits actively grasp perch). In the region of the pad, the tendon sheath of many birds is unribbed, or only very slightly so, and it is always separated from the tendon of the M. flexor digitorum longus by tendons of the other toe flexor muscles. Passive leg flexion produces no toe flexion in anesthetized Starlings and only after 15-20 min, at the onset of rigor mortis, in freshly sacrificed Starlings. Anesthetized Starlings could not remain perched upon becoming unconscious (ADFM, DTLM intact). Birds whose digital flexor tendons were severed or the locking mechanism eliminated surgically (no ADFM or DTLM), so without ability to flex their toes, slept on the perch in a manner similar to unoperated Starlings (except CAA ∼90°-110°). Consequently, there is no APM or ADFM and the DTLM, although involved in lots of other activities, only acts in perching with active contraction of the digital flexor muscles. PMID:22539208

  14. Complete mitochondrial genome of Sebastes vulpes (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea.

    PubMed

    Jang, Yo-Soon; Oh, Sung-Yong; Lee, Eun Kyung; Myoung, Jung-Goo; Park, Jeong-Ho; Kim, Ki-Yong; Kim, Sung

    2016-01-01

    Sebastes vulpes is considered a valid species despite the presence of extensive hybrids. To obtain the basic genetic intraspecific structure, we analyzed the complete mitogenome of S. vulpes using next-generation sequencing. The complete mitogenome was 16,462 bp in length containing 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and 1 control region. The complete mitogenome comprised 27.7% A, 26.5% T, 17.1% G and 28.6% C, showing a minor AT bias (54.3%). The initial codon in all PCGs was ATG, excluding COX1 (GTG). The majority of stop codons in the PCGs were TAA, excluding ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). All tRNAs had a typical cloverleaf structure, excluding tRNA(Ser (AGY)), which lacked the DHU arm. The complete mitogenome of S. vulpes can be used to study hybridisation and on-going speciation. PMID:25101853

  15. Cloning and expression analysis of vasa during the reproductive cycle of Korean rockfish, Sebastes schlegeli

    NASA Astrophysics Data System (ADS)

    Mu, Weijie; Wen, Haishen; He, Feng; Li, Jifang; Liu, Miao; Ma, Ruiqin; Zhang, Yuanqing; Hu, Jian; Qi, Baoxia

    2013-03-01

    Vasa, which is a conserved member of the DEAD-box protein family, plays an indispensable role in primordial germ cell proliferation. However, the expression of vasa gene during the reproductive cycle in ovoviviparous fish has not been documented. In this study, the full-length sequence of vasa was obtained from the ovary of Korean rockfish ( Sebastes schlegeli) using reverse transcription-PCR and rapid amplification of cDNA ends. The Vasa with a mature protein of 650 amino acids showed greatest homology (84%) with giant gourami ( Osphronemus goramy) and Pacific bluefin tuna ( Thunnus orientalis). The expression of vasa mRNA in Korean rockfish was detected in gonads only, suggesting its specific role in gonadal development. In addition, seasonal changes in the vasa expression levels were examined in gonads by quantitative real-time PCR. The vasa transcript levels in adult testis were found higher during spermatogenesis than during spermiation. The vasa transcript levels remained relatively high at the early ovary stage but declined during ovary maturation in adult female fish. These results suggest that the vasa gene play an important role in spermatogenesis and early oogenesis during the reproductive cycle of Korean rockfish.

  16. Potential use of offshore marine structures in rebuilding an overfished rockfish species, bocaccio (Sebastes paucispinis)

    USGS Publications Warehouse

    Love, M.S.; Schroeder, D.M.; Lenarz, W.; MacCall, A.; Bull, A.S.; Thorsteinson, L.

    2006-01-01

    Although bocaccio (Sebastes paucispinis) was an economically important rockfish species along the west coast of North America, overfishing has reduced the stock to about 7.4% of its former unfished population. In 2003, using a manned research submersible, we conducted fish surveys around eight oil and gas platforms off southern California as part of an assessment of the potential value of these structures as fish habitat. From these surveys, we estimated that there was a minimum of 430,000 juvenile bocaccio at these eight structures. We determined this number to be about 20% of the average number of juvenile bocaccio that survive annually for the geographic range of the species. When these juveniles become adults, they will contribute about one percent (0.8%) of the additional amount of fish needed to rebuild the Pacific Coast population. By comparison, juvenile bocaccio recruitment to nearshore natural nursery grounds, as determined through regional scuba surveys, was low in the same year. This research demonstrates that a relatively small amount of artificial nursery habitat may be quite valuable in rebuilding an overfished species.

  17. Food of alewives, yellow perch, spottail shiners, trout-perch, and slimy and fourhorn sculpins in southeastern Lake Michigan

    USGS Publications Warehouse

    Wells, LaRue

    1980-01-01

    Stomachs of 1,064 alewives (Alosa pseudoharengus), 1,103 yellow perch (Perca flavescens), 246 spottail shiners (Notropis hudsonius), 288 trout-perch (Percopsis omiscomaycus), 454 slimy sculpins (Cottus cognatus), and 562 fourhorn sculpins (Myoxocephalus quadricornis) from Lake Michigan were examined for food contents. Fish were sampled primarily from March to November and nearly all were caught at the bottom in the southeastern part of the lake near Saugatuck, Michigan. Depths of capture (m) were: alewives, 5 to 110; yellow perch, 5 to 26; spottail shiners, 5 to 31; trout-perch, 9 to 46; slimy sculpins, 31 to 91; and fourhorn sculpins, 73 to 110. Alewives, particularly those less than 140 mm long, fed chiefly on zooplankton; Pontoporeia usually constituted most of the rest of the food, although Mysis and immature midges were occasionally eaten in considerable quantity. Yellow perch ate primarily Pontoporeia, fish eggs, Mysis, and crayfish; Pontoporeia was consumed most heavily by perch less than 250 mm long and those in relatively deep water, fish (mainly slimy sculpins) by those 200 mm long or longer, Mysis by those in deep water, and crayfish by those on rocky bottom. Spottail shiners fed most commonly on immature midges, Pontoporeia, zooplankton, fingernail clams, and (in July only) fish eggs; immature midges were eaten mainly by shiners in shallow water; and Pontoporeia by those in deeper areas. The diet of trout-perch was strongly dominated by Pontoporeia and immature midges. Slimy sculpins ate Pontoporeia almost exclusively. Fourhorn sculpins fed almost entirely on Mysis and Pontoporeia; Pontoporeia was particularly important in the diet of the larger fish.

  18. Food of alewives, yellow perch, spottail shiners, trout-perch, and slimy and fourhorn sculpins in southeastern Lake Michigan

    USGS Publications Warehouse

    Wells, LaRue

    1980-01-01

    Stomachs of 1, 064 alewives (Alosa pseudoharengus), 1, 103 yellow perch (Perca flavescens), 246 spottail shiners (Notropis hudsonius), 288 trout-perch (Percopsis omiscomaycus), 454 slimy sculpins (Cottus cognatus), and 562 fourhorn sculpins (Myoxocephalus quadricornis) from Lake Michigan were examined for food contents. Fish were sampled primarily from March to November and nearly all were caught at the bottom in the southeastern part of the lake near Saugatuck, Michigan. Depths of capture (m) were: alewives, 5 to 110; yellow perch, 5 to 26; spottail shiners, 5 to 31; trout-perch, 9 to 46; slimy sculpins, 31 to 91; and fourhorn sculpins, 73 to 110. Alewives, particularly those less than 140 mm long, fed chiefly on zooplankton; Pontoporeia usually constituted most of the rest of the food, although Mysis and immature midges were occasionally eaten in considerable quantity. Yellow perch ate primarily Pontoporeia, fish eggs, Mysis, and crayfish; Pontoporeiawas consumed most heavily by perch less than 250 mm long and those in relatively deep water, fish (mainly slimy sculpins) by those 200 mm long or longer, Mysis by those in deep water, and crayfish by those on rocky bottom. Spottail shiners fed most commonly on immature midges, Pontoporeia, zooplankton, fingernail clams, and (in July only) fish eggs; immature midges were eaten mainly by shiners in shallow water; and Pontoporeia by those in deeper areas. The diet of trout-perch was strongly dominated by Pontoporeia and immature midges. Slimy sculpins ate Pontoporeia almost exclusively. Fourhorn sculpins fed almost entirely on Mysis and Pontoporeia Pontoporeia was particularly important in the diet of the larger fish.

  19. Impact of interannual changes of large scale circulation and hydrography on the spatial distribution of beaked redfish (Sebastes mentella) in the Irminger Sea

    NASA Astrophysics Data System (ADS)

    Núñez-Riboni, Ismael; Kristinsson, Kristján; Bernreuther, Matthias; van Aken, Hendrik M.; Stransky, Christoph; Cisewski, Boris; Rolskiy, Alexey

    2013-12-01

    This study provides evidence of the influence of hydrography and large scale ocean circulation on the geographical distribution of beaked redfish (Sebastes mentella) in the Irminger Sea on the interannual time scale, from 1992 to 2011. The results reveal the average relationship of adult pelagic redfish to their physical habitat from 100 to 800 m depth: the most preferred latitude, longitude, depth, temperature and salinity for redfish are approximately 58°N, 41°W, 557 m, 4.5 °C and 34.87, respectively. The redfish habitat corresponds in a temperature-salinity (TS) diagram to a mixing triangle between East Greenland Current Water (EGCW), Labrador Sea Water (LSW) and Irminger Current Water (ICW). The geographical centre of mass of the redfish distribution (as revealed by acoustic fish density) indicates displacements from year to year. Changes in hydrographic conditions were investigated in detail for possible reasons for these displacements. Empirical Orthogonal Analysis reveals that maximum variations of water mass volume on an interannual time-scale in the study region correspond to ICW and LSW changes, while EGCW remains comparatively stable. Indices of redfish geographical centroid, LSW volume, ICW temperature and Subpolar Gyre (SPG) intensity suggest that the geographical redfish displacements are closely related to interannual changes of ICW modulated by the SPG intensity with a lag of 1 or 2 years. In comparison, LSW seems to have no impact on the redfish distribution at the studied depth range. The time lag between ICW and redfish displacements indicates an indirect influence of temperature on redfish. Hence, changes of chlorophyll-a (from satellite imagery), as a proxy for primary production, were used in a first approach to study the role of food availability. The analysis is based on acoustic and trawl data from nine expeditions coordinated by the International Council for the Exploration of the Sea (ICES), around 71,000 hydrographic stations from the

  20. Development of a bio-inspired UAV perching system

    NASA Astrophysics Data System (ADS)

    Xie, Pu

    Although technologies of unmanned aerial vehicles (UAVs) including micro air vehicles (MAVs) have been greatly advanced in the recent years, it is still very difficult for a UAV to perform some very challenging tasks such as perching to any desired spot reliably and agilely like a bird. Unlike the UAVs, the biological control mechanism of birds has been optimized through millions of year evolution and hence, they can perform many extremely maneuverability tasks, such as perching or grasping accurately and robustly. Therefore, we have good reason to learn from the nature in order to significantly improve the capabilities of UAVs. The development of a UAV perching system is becoming feasible, especially after a lot of research contributions in ornithology which involve the analysis of the bird's functionalities. Meanwhile, as technology advances in many engineering fields, such as airframes, propulsion, sensors, batteries, micro-electromechanical-system (MEMS), and UAV technology is also advancing rapidly. All of these research efforts in ornithology and the fast growing development technologies in UAV applications are motivating further interests and development in the area of UAV perching and grasping research. During the last decade, the research contributions about UAV perching and grasping were mainly based on fixed-wing, flapping-wing, and rotorcraft UAVs. However, most of the current researches in UAV systems with perching and grasping capability are focusing on either active (powered) grasping and perching or passive (unpowered) perching. Although birds do have both active and passive perching capabilities depending on their needs, there is no UAV perching system with both capabilities. In this project, we focused on filling this gap. Inspired by the anatomy analysis of bird legs and feet, a novel perching system has been developed to implement the bionics action for both active grasping and passive perching. In addition, for developing a robust and

  1. Daily growth increments in otoliths of juvenile black rockfish, Sebastes melanops: an evaluation of autoradiography as a new method of validation

    SciTech Connect

    Not Available

    1988-10-01

    This study evaluates the commonly used oxytetracycline hydrochloride (OTC) and an alternate chemical, the radioisotope calcium-45, in terms of their success as time-markers to validate daily growth increment formation in the otoliths of juvenile black rockfish, Sebastes melanops.

  2. Indirect effects of sea otters on rockfish (Sebastes spp.) in giant kelp forests.

    PubMed

    Markel, Russell W; Shurin, Jonathan B

    2015-11-01

    Sea otters are a classic example of a predator controlling ecosystem productivity through cascading effects on basal, habitat-forming kelp species. However, their indirect effects on other kelp-associated taxa like fishes are poorly understood. We examined the effects of sea otter (Enhydra lutris) reintroduction along the west coast of Vancouver Island, Canada on giant kelp (Macrocystis pyrifera) distributions and the trophic niches and growth of two common kelp forest fishes, black (Sebastes melanops) and copper (S. caurinus) rockfishes. We sampled 47 kelp forests, and found that red sea urchins (Strongylocentrotus franciscanus) were eliminated in the presence of otters, and that kelp forests were 3.7 times deeper and 18.8 times larger. Despite order-of-magnitude differences in kelp forest size, adult black and copper rockfishes contained less kelp-derived carbon in their tissues (as measured by stable isotopes of C and N) in regions with otters. Adults of both species had higher mean trophic positions in the presence of otters, indicating more frequent consumption of higher trophic level prey such as fishes. Smaller trophic niche space of rockfishes in the presence of otters indicated a higher degree of trophic specialization. Juvenile black rockfishes rapidly shifted to higher kelp-carbon contents, trophic positions, and body condition factors after settling in kelp forests. The relationships of growth to length, percentage of kelp carbon, and trophic position varied between the two regions, indicating that potential effects of kelp forest size on trophic ontogeny may also affect individual performance. Our results provide evidence that the indirect effects of otters on rockfishes arise largely through the creation of habitat for fishes and other prey rather than a direct trophic connection through invertebrates or other consumers of kelp productivity. PMID:27070008

  3. Cloning and expression analysis of a HSP70 gene from Korean rockfish (Sebastes schlegeli).

    PubMed

    Mu, Weijie; Wen, Haishen; Li, Jifang; He, Feng

    2013-10-01

    The gene encoding HSP70 was isolated from Korean rockfish Sebastes schlegeli by homologous cloning and rapid amplification of cDNA ends (RACE). The full-length of HSP70 cDNA was composed of 2259 bp and encoded a polypeptide of 639 amino acids. BLAST analysis showed that HSP70 of S. schlegeli shared high identities with those of the Lates calcarifer, Oreochromis niloticus, Seriola quinqueradiata HSP70s (88-89%). Our current study also revealed that HSP70 of Korean rockfish was expressed in many tissues by RT-PCR under unstressed condition. Quantitative real-time PCR showed that the expression patterns of Korean rockfish HSP70 were developmental stage-dependency. The expression of HSP70 was measured by quantitative real-time PCR after different oxygen treatments. The results showed that expression of HSP70 increased significantly after exposure to hypoxia for 30 min in gill and ovary, and then decreased for 60 min, and the level in spleen and liver gradually increased and reached the highest at 60 min. In addition, in gill, spleen and liver, the HSP70 mRNA level reached the maximum in hypoxia group after one hour different oxygen concentration stress. Increased amounts of serum thyroxine (T4), and triiodothyronine (T3) were also found during 30 min hypoxia treatment and 60 min normoxia group in our study. All of the results provide information to further study the mechanism of physiology and immune function under stress conditions of ovoviviparous teleosts. PMID:23877000

  4. Antihelminthic potential of quinacrine and oxyclozanide against gill parasite Microcotyle sebastis in black rockfish Sebastes schlegeli.

    PubMed

    Kang, Yue Jai; Wakabayashi, Chizuha; Kim, Ki Hong

    2016-05-26

    The aim of this study was to assess the treatment potential of quinacrine and oxyclozanide against Microcotyle sebastis (Monogenea: Polyopisthocotylea) infection in cultured black rockfish Sebastes schlegeli. The oral administration of quinacrine led to a reduction in the mean abundance of M. sebastis infection in all quinacrine-treated groups, and the groups of fish administered quinacrine at 50, 100, and 200 mg kg(-1) for 3 consecutive days showed a parasite mean abundance that was 50 to 30% lower compared to that of the control group, suggesting that quinacrine has a therapeutic potential against M. sebastis. Although oxyclozanide showed a very high in vitro killing activity, in oral administration experiments, only the groups of fish administered 200 mg kg(-1) showed less than 50% mean abundance of M. sebastis compared to the control groups, suggesting that the absorption efficiency of orally administered oxyclozanide might be low in black rockfish and/or that M. sebastis might be less sensitive to orally ingested oxyclozanide. As praziquantel has been the sole therapeutic against M. sebastis infection in Korea for a long time, a broadening of available control measures is advisable in order to reduce the possible emergence of praziquantel-resistant M. sebastis. In our study, although quinacrine and oxyclozanide showed a therapeutic potential against M. sebastis, the treatment efficacy was not high enough to replace praziquantel. Thus, after investigations on the pathological effects and pharmacodynamics, use of quinacrine or oxyclozanide in combination with praziquantel may be considered as a way to prevent praziquantel resistance in M. sebastis. PMID:27225210

  5. Use of tetracycline hydrochloride and alizarin complexone for immersion marking black rockfish Sebastes schlegelii

    NASA Astrophysics Data System (ADS)

    Lü, Hongjian; Zhang, Xiumei; Fu, Mei; Xi, Dan; Gao, Tianxiang

    2014-07-01

    We tested the utility of chemical marking techniques in the juvenile black rockfish Sebastes schlegelii. Juveniles (30-40 mm total length) were immersed in a range of tetracycline hydrochloride (TC) solutions at concentrations ranging from 300 to 500 mg/L, and alizarin complexone (ALC) solutions at concentrations ranging from 200 to 400 mg/L in filtered sea water (salinity of 30) for 24 h, respectively. Otoliths (sagittae, asteriscus), scales, fin rays (dorsal, pectoral, ventral, anal, and caudal fin rays), and fin spines (dorsal, ventral, and anal fin spines) were sampled and used to detect fluorescent marks after a 60-day growth experiment. With the exception of 300 mg/L TC, acceptable marks were produced in the otoliths and fin spines by all concentrations of TC and ALC. In particular, we observed clearly visible marks in the sagittae, asteriscus, and fin spines under normal light at concentrations of 200-400 mg/L, 250-400 mg/L, and 250-400 mg/L ALC, respectively. Scales and fin rays had acceptable marks at much higher concentrations (≥350 mg/L TC, ≥250 mg/L ALC for scales and ≥350 mg/L TC, ≥300 mg/L ALC for fin rays). The best mark quality (i.e., acceptable marks were observed in all sampled structures after immersion marking) were obtained following immersion in TC at between 350-500 mg/L, and ALC between 300-400 mg/L. In addition, there was no significant difference in survival and growth of TC and ALC marked fish compared to their controls up to 60 days post-marking ( P > 0.05).

  6. Histological observation of germ cell development and discovery of spermatophores in ovoviviparous black rockfish ( Sebastes schlegeli Hilgendorf) in reproductive season

    NASA Astrophysics Data System (ADS)

    Feng, Junrong; Liu, Liming; Jiang, Haibin; Wang, Maojian; Du, Rongbin

    2014-10-01

    Black rockfish ( Sebastes schlegeli) is an important species for culture; however, its reproductive characteristics have not been fully documented. In this study, we investigated the morphology and developmental process of germ cells in this ovoviviparous rockfish in reproductive season (October 2011-November 2012) with histological methods. We found that the gonad of mature fish showed notable seasonal changes in developmental characteristics and morphological structure. The sperm cells matured during a period lasting from October to December, significantly earlier than the oocytes did. A large number of spermatozoa and other cells occurred in testis at different developmental stages. Vitellogenesis in oocytes began in October, and gestation appeared in April next year. Spermatophores were discovered for the first time in Sebastes, which assembled in testis, main sperm duct, oviduct and genital tract, as well as ovarian cavity in October and April. These organs may serve either as production or hiding places for spermatophores and spermatozoa which were stored and transported in form of spermatophores. Testicular degeneration started from the distal part of testis in April, with spermatophores assembled in degenerating testis and waiting for transportation. The copulation probably lasted for a long period, during which the spermatozoa were discharged in batches as spermatophores. These spermatophores were coated with sticky materials secreted from the interstitial areas of testis and the main sperm duct, then transported into ovary.

  7. A transcriptomic scan for positively selected genes in two closely related marine fishes: Sebastes caurinus and S. rastrelliger.

    PubMed

    Heras, Joseph; Koop, Ben F; Aguilar, Andres

    2011-06-01

    Comparative genomic analyses can provide valuable insight into functional evolutionary divergence among closely related species. Here we employ a comparative evolutionary analysis of expressed sequence tags (ESTs) from two closely related species of marine fishes (genus Sebastes--rockfish). Sebastes is a highly diverse group of marine fishes that inhabit a wide array of marine habitats and the study of this group can provide insights into speciation in the marine environment. ESTs were developed for S. caurinus (23,668 from brain, kidney, and spleen tissues) and S. rastrelliger (11,207 from brain and pituitary tissues). Following assembly we were able to identify, with high confidence, 257 orthologous sequence pairs between the two species through a reciprocal best hit blast search. An analysis of functional divergence between orthologs revealed that 19.46% had Ka/Ks values greater than 0.5 and 8.17% had Ka/Ks values greater than one, identifying a large pool of candidate genes to further study adaptive divergence in the group. Genes with elevated Ka/Ks values belonged to the following functional categories: immune function, metabolism, longevity, and reproductive behavior, indicating that adaptive divergence in these functional groups may be important in the diversification of this group of fishes. This study provides the ground work to better understand the molecular evolution of genes involved in a radiation of marine fishes. PMID:21620330

  8. Access to Barrier Perches Improves Behavior Repertoire in Broilers

    PubMed Central

    Ventura, Beth A.; Siewerdt, Frank; Estevez, Inma

    2012-01-01

    Restriction of behavioral opportunities and uneven use of space are considerable welfare concerns in modern broiler production, particularly when birds are kept at high densities. We hypothesized that increased environmental complexity by provision of barrier perches would help address these issues by encouraging perching and enhancing use of the pen space across a range of stocking densities. 2,088 day-old broiler chicks were randomly assigned to one of the following barrier and density treatment combinations over four replications: simple barrier, complex barrier, or control (no barrier) and low (8 birds/m2), moderate (13 birds/m2), or high (18 birds/m2) density. Data were collected on focal birds via instantaneous scan sampling from 2 to 6 weeks of age. Mean estimates per pen for percent of observations seen performing each behavior, as well as percent of observations in the pen periphery vs. center, were quantified and submitted to an analysis of variance with week as the repeated measure. Barrier perches, density and age affected the behavioral time budget of broilers. Both simple and complex barrier perches effectively stimulated high perching rates. Aggression and disturbances were lower in both barrier treatments compared to controls (P<0.05). Increasing density to 18 birds/m2 compared to the lower densities suppressed activity levels, with lower foraging (P<0.005), decreased perching (P<0.0001) and increased sitting (P = 0.001) earlier in the rearing period. Disturbances also increased at higher densities (P<0.05). Use of the central pen area was higher in simple barrier pens compared to controls (P<0.001), while increasing density above 8 birds/m2 suppressed use of the central space (P<0.05). This work confirms some negative effects of increasing density and suggests that barrier perches have the potential to improve broiler welfare by encouraging activity (notably by providing accessible opportunities to perch), decreasing aggression and disturbances

  9. A bacterial disease of yellow perch (Peres flavescens)

    USGS Publications Warehouse

    Ross, A.J.; Nordstrom, P.R.; Bailey, J.E.; Heaton, J.H.

    1960-01-01

    Examination of the freshly dead perch revealed the presence of multiple petechiae, which were visible externally as well as in the dorsal musculature. The peritoneal cavity showed evidence of inflammation and contained a bloody ascitic fluid. A number of the dead fish were placed on ice and shipped to the Western Fish Disease Laboratory in Seattle for bacteriological studies.

  10. Developing Genetically Defined Yellow Perch (Perca flavescens) Broodstocks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Yellow Perch are an ecologically and economically important species common in Midwest commercial aquaculture. Broodstocks are traditionally derived from wild populations locally accessible to the producer. This can lead to inconsistencies in the success of producers within and between regions. Su...

  11. WATER DISPLACEMENT DURING SPARGING UNDER PERCHED WATER-TABLE CONDITIONS

    EPA Science Inventory

    The feasibility of using sparging to purposefully displace perched water in silt loam soils was evaluated at a field site in Northwestern Oklahoma. uring sparging, a transient response in water level measurements was observed in observation wells which is attributed to water disp...

  12. The effect of perch availability during pullet rearing and egg laying on the behavior of caged White Leghorn hens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Enriched cages, compared to conventional cages, allow egg laying strains of chickens to meet some behavioral needs, including the high motivation to perch. The objective of this study was to determine if perch availability during rearing affected perch use as adults and if perch presence affected ea...

  13. Late Holocene paleoenvironmental and paleoclimatic evolution at Elaiussa Sebaste archeological area (South-Eastern Turkey): preliminary results.

    NASA Astrophysics Data System (ADS)

    Melis, Romana; Bernasconi, Maria Pia; Colizza, Ester; Di Rita, Federico; Equini Schneider, Eugenia; Montenegro, Maria Eugenia; Pugliese, Nevio

    2013-04-01

    Geological disciplines are increasingly applied to archaeological research. Their potentialities are able to cover numerous fields of research, since they can become very interesting tools to define the ancient environments, the origin of the human settlements and the natural and anthropic processes which occurred through the evolution of the territory. Elaiussa Sebaste (Mersin region, South-Eastern coast of the Turkey), which was an important coastal town from the II century BC to VII century AD, may represent a noteworthy field of application of geological disciplines. This site was one of the main trading harbours of the Mediterranean (from the Augustan to the Byzantine era) growing in the Augustan period and maintaining its prestige until the late Empire and the Byzantine era. Actually it was the intersection of the most important shipping and land routes among Syria, Egypt and the Anatolian peninsula. The evolution of the coastal environment around this town has been continuously modified by men along its history. The most evident modification occurred North and South the promontory of Elaiussa-Sebaste bay, i.e. the construction of two harbours, which have been subsequently buried by not well defined events. The definition of the geological processes controlling the evolution of the coastal area during the last 3000 years, should become essential to reconstruct the succession of the palaeoenvironments of Elaiussa Sebaste, including the decline of the harbours. With regard to this topic, the geomorphologic analysis reveals the complex interactions among tectonics, erosion and sedimentation in this coastal area in both, emerged and in ancient times submerged settings facing the archaeological site. During the summer 2012, a geological survey allowed us to drill nine boreholes along the land-to-sea transects in both harbours. Preliminary observations indicate the stratigraphic evolution from restricted to open marine coastal environments. Sedimentology

  14. Ultraviolet Radiation Influences Perch Selection by a Neotropical Poison-Dart Frog

    PubMed Central

    Kats, Lee B.; Bucciarelli, Gary M.; Schlais, David E.; Blaustein, Andrew R.; Han, Barbara A.

    2012-01-01

    Ambient ultraviolet-B radiation can harm amphibian eggs, larvae and adults. However, some amphibians avoid UV-B radiation when given the opportunity. The strawberry poison dart frog, Oophaga pumilio, is diurnal and males vocalize throughout the day in light gaps under forest canopies that expose them to solar radiation. Previous studies have demonstrated that males calling from high perches are more successful at mating than those at lower perches. We investigated whether frogs at higher perches receive more ultraviolet-B than those calling from lower perches. We also investigated whether frogs on perches receiving relatively low ultraviolet-B levels maintained their positions for longer compared to individuals calling from perches receiving higher levels of ultraviolet-B. Finally, since it has been hypothesized that some animals utilize levels of UV-A as a visual cue to avoid UV-B damage, we artificially elevated ultraviolet-A levels to examine whether males exposed to artificially elevated ultraviolet-A abandoned their perches sooner compared to males exposed to visible light. We found that frogs called from perches receiving low ultraviolet-B regardless of perch height, and that frogs maintain their positions longer on perches receiving low ultraviolet-B compared to perches receiving even slightly higher ultraviolet-B levels. Exposing the frogs to artificially elevated levels of ultraviolet-A radiation caused males to move off of their perches faster than when they were exposed to a control light source. These experiments suggest that ultraviolet radiation plays an important role in frog behavior related to perch selection, even in rainforests where much of the solar radiation is shielded by the forest canopy. PMID:23251505

  15. Ultraviolet radiation influences perch selection by a neotropical poison-dart frog.

    PubMed

    Kats, Lee B; Bucciarelli, Gary M; Schlais, David E; Blaustein, Andrew R; Han, Barbara A

    2012-01-01

    Ambient ultraviolet-B radiation can harm amphibian eggs, larvae and adults. However, some amphibians avoid UV-B radiation when given the opportunity. The strawberry poison dart frog, Oophaga pumilio, is diurnal and males vocalize throughout the day in light gaps under forest canopies that expose them to solar radiation. Previous studies have demonstrated that males calling from high perches are more successful at mating than those at lower perches. We investigated whether frogs at higher perches receive more ultraviolet-B than those calling from lower perches. We also investigated whether frogs on perches receiving relatively low ultraviolet-B levels maintained their positions for longer compared to individuals calling from perches receiving higher levels of ultraviolet-B. Finally, since it has been hypothesized that some animals utilize levels of UV-A as a visual cue to avoid UV-B damage, we artificially elevated ultraviolet-A levels to examine whether males exposed to artificially elevated ultraviolet-A abandoned their perches sooner compared to males exposed to visible light. We found that frogs called from perches receiving low ultraviolet-B regardless of perch height, and that frogs maintain their positions longer on perches receiving low ultraviolet-B compared to perches receiving even slightly higher ultraviolet-B levels. Exposing the frogs to artificially elevated levels of ultraviolet-A radiation caused males to move off of their perches faster than when they were exposed to a control light source. These experiments suggest that ultraviolet radiation plays an important role in frog behavior related to perch selection, even in rainforests where much of the solar radiation is shielded by the forest canopy. PMID:23251505

  16. Splenic lipidosis in intensively cultured perch, Perca fluviatilis L.

    PubMed

    Stejskal, V; Kouřil, J; Policar, T; Svobodová, Z

    2016-01-01

    Macroscopically visible lipid deposition varying in size from pinpoint to 8-mm diameter was found in spleens of a population of intensively farmed perch, Perca fluviatilis L. over a 24-month rearing period. Large agglomerates of adipocytes distinguishable from surrounding normal tissue occurred in all individuals with spleen lipidosis. Several affected fish presented total dystrophy of large clusters of hepatocytes. Prevalence of lipidosis was 5.0% at 12 months and 16.6% at 24 months. There was no significant difference between fatty acid profiles of liver or perivisceral fat of perch with and without lipidosis except for linoleic, myristic, γ-linoleic, cis-eicosatrienic, palmitooleic acid. Body weight and hepatosomatic, perivisceral fat and splenosomatic indices were not associated with lipidosis. There was no significant effect of lipidosis on mortality or growth. PMID:25589287

  17. Impact of impingement on the Hudson River white perch population

    SciTech Connect

    Barnthouse, L W; Van Winkle, W

    1980-01-01

    The impact of power plant impingement on the 1974 and 1975 year classes of the Hudson River white perch population is assessed using a simple model derived from Ricker's theory of fisheries dynamics. The impact of impingement is expressed in the model as the conditional mortality rate, rather than as the more commonly used exploitation rate. Since the calculated impact is sensitive to errors in the estimation of population size and total mortality, ranges of probable values of these quantities are used to compute upper and lower bounds on the fractional reduction in abundance of each year class. Best estimates of abundance and mortality are used to compute the conditional impingement mortality rate separately for each plant and month. The results are used to assess the relative impacts of white perch impingement at six Hudson River power plants and to identify the seasons during which the impact is highest.

  18. Habitat change in a perched dune system along Lake Superior

    USGS Publications Warehouse

    Loope, Walter L.; McEachern, A. Kathryn

    1998-01-01

    Episodes of habitat change, driven by changes in levels of the Great Lakes, must be considered when assessing human effects upon coastal vegetation and rare species. Paleoecological studies, baseline inventories, and long-term monitoring programs within the Grand Sable Dunes, a perched-dune system along Lake Superior, provide a window on vegetation change at different spatial and temporal scales and also provide an illustrative case study.

  19. Reproductive health of yellow perch Perca flavescens in selected tributaries of the Chesapeake Bay

    USGS Publications Warehouse

    Blazer, Vicki; Pinkney, Alfred E.; Jenkins, Jill A.; Iwanowicz, Luke R.; Minkkinen, Steven; Draugelis-Dale, Rassa O.; Uphoff, James H.

    2013-01-01

    Reduced recruitment of yellow perch has been noted for a number of years in certain urbanized watersheds (South and Severn Rivers) of the Chesapeake Bay. Other rapidly developing watersheds such as Mattawoman Creek are more recently showing evidence of reduced recruitment of anadromous fishes. In this study, we used a battery of biomarkers to better document the reproductive health of adult yellow perch collected during spring spawning in 2007–2009. Perch were collected in the South and Severn Rivers, Mattawoman Creek and the less developed Choptank and Allen's Fresh watersheds for comparison. Gonadosomatic indices, plasma reproductive hormone concentrations, plasma vitellogenin concentrations and gonad histology were evaluated in mature perch of both sexes. In addition, sperm quantity (cell counts) and quality (total and progressive motility, spermatogenic stage and DNA integrity), were measured in male perch. Many of these biomarkers varied annually and spatially, with some interesting statistical results and trends. Male perch from the Choptank and Allen's Fresh had generally higher sperm counts. In 2008 counts were significantly lower in the perch from the Severn when compared to other sites. The major microscopic gonadal abnormality in males was the proliferation of putative Leydig cells, observed in testes from Severn and less commonly, Mattawoman Creek perch. Observations that could significantly impact egg viability were an apparent lack of final maturation, abnormal yolk and thin, irregular zona pellucida. These were observed primarily in ovaries from Severn, South and less commonly Mattawoman Creek perch. The potential association of these observations with urbanization, impervious surface and chemical contaminants is discussed.

  20. Competition between nonindigenous ruffe and native yellow perch in laboratory studies

    USGS Publications Warehouse

    Savino, Jacqueline F.; Kolar, Cynthia S.

    1996-01-01

    The ruffe Gymnocephalus cernuus is a European percid that was accidently introduced in Duluth Harbor, Lake Superior. This nonindigenous species is closely related to yellow perch Perca flavescens, and because the two species have similar diets and habitat requirements, they are potential competitors. Laboratory studies in aquaria and pools were conducted to determine whether ruffe can compete with yellow perch for food. Ruffe had capture rates similar to those of yellow perch when food was unlimited. Ruffe spent more time than yellow perch over a feeding container before leaving it and searching again, and they also required less time to ingest (or handle) prey. However, the presence of yellow perch shortened the time ruffe spent over foraging areas when food was more limited. In addition, yellow perch were more active than ruffe, as indicated by their more frequent visits to a feeding container. Hence, the outcome of exploitative competition was not conclusive; ruffe appear to have the advantage in some behaviors, yellow perch in others. Ruffe were much more aggressive than yellow perch, and interference competition may be important in the interactions between these species. Our results indicate that ruffe might compete with native yellow perch.

  1. Perch compliance and experience affect destination choice of brown tree snakes (Boiga irregularis).

    PubMed

    Mauro, A Alexander; Jayne, C Bruce

    2016-04-01

    Arboreal animals often encounter branches with variable diameters that are highly correlated with stiffness, but how surface compliance affects the perch choice of animals is poorly understood. We used artificial branches to test the effects of different diameters and compliance on the choice between two destinations for twenty brown tree snakes as they bridged gaps. When both destinations were rigid, the diameters of the surfaces did not affect perch choice. However, with increased experience snakes developed a preference for a rigid, large-diameter perch compared to a compliant, small-diameter perch that collapsed under loads that were a small fraction of the weight of the snake. In hundreds of trials, with only one exception, the snakes proceeded to crawl entirely onto all rigid perches after first touching them, whereas the snakes commonly withdrew from the compliant perch even after touching it so lightly that it did not collapse. Hence, both tactile and visual cues appear to influence how these animals select a destination while crossing a gap. The preference for the rigid, large-diameter perch compared to the compliant, small-diameter perch developed mainly from short-term learning during three successive trials per testing session per individual. Furthermore, a preference for large diameters did not persist in the final treatment which used a rigid, large-diameter perch and a rigid, small-diameter perch. Hence, brown tree snakes appeared to be able to form short-term associations between the perch appearance and stiffness, the latter of which may have been determined via tactile sensory input. PMID:26723759

  2. Development of Genetically-defined Yellow Perch (Perca flavescens) Broodstocks for Selective Breeding

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We have initiated development of genetically defined yellow perch (Perca flavescens) broodstocks. For this, sixteen wild perch populations throughout the U.S. were sampled and analyzed using published (Leclerc et al. Molecular Ecology 2000, 9: 993-1011) and newly developed microsatellite loci. Gen...

  3. Identification of gender in yellow perch Perca flavescens using external morphology

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A non-lethal and rapid method for reliable identification of gender in yellow perch has been developed. On average, yellow perch females grow faster than males and undergo sexual maturity at an earlier age. Such size discrepancies in mixed culture situations pose difficulties with aquaculture produc...

  4. Comparative effects of constant versus fluctuating thermal regimens on yellow perch growth, feed conversion and survival

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of fluctuating or constant thermal regimens on growth, mortality, and feed conversion were determined for juvenile yellow perch (Perca flavescens). Yellow perch averaging 156mm total length and 43g body weight were held in replicate 288L circular tanks for 129 days under: 1) a diel therm...

  5. Scaling the sublethal effects of methylmercury to yellow perchs population dynamics using adverse outcome pathway framework

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study sought to evaluate the effects of environmentally relevant dietary MeHg exposures on adult female yellow perch (Perca flavescens) and zebrafish (Danio rerio) reproduction. Yellow perch were used in the study for their socioeconomic and ecological importance within the Great Lakes basin, a...

  6. Complete Genome Sequence of a Giant Sea Perch Iridovirus in Kaohsiung, Taiwan

    PubMed Central

    Hong, Jiann-Ruey

    2016-01-01

    We report here the complete genome sequence of a megalocytivirus strain, GSIV-K1, isolated from a farmed giant sea perch (Lates calcarifer) in Kaohsiung, Taiwan. GSIV-K1 causes mortality in farmed marine fish, including giant sea perch and groupers. The genome sequence is nearly identical to the genome of the orange-spotted grouper iridovirus. PMID:27125488

  7. Complete Genome Sequence of a Giant Sea Perch Iridovirus in Kaohsiung, Taiwan.

    PubMed

    Wen, Chiu-Ming; Hong, Jiann-Ruey

    2016-01-01

    We report here the complete genome sequence of a megalocytivirus strain, GSIV-K1, isolated from a farmed giant sea perch (Lates calcarifer) in Kaohsiung, Taiwan. GSIV-K1 causes mortality in farmed marine fish, including giant sea perch and groupers. The genome sequence is nearly identical to the genome of the orange-spotted grouper iridovirus. PMID:27125488

  8. Was Lates Late? A Null Model for the Nile Perch Boom in Lake Victoria

    PubMed Central

    Downing, Andrea S.; Galic, Nika; Goudswaard, Kees P. C.; van Nes, Egbert H.; Scheffer, Marten; Witte, Frans; Mooij, Wolf M.

    2013-01-01

    Nile perch (Lates niloticus) suddenly invaded Lake Victoria between 1979 and 1987, 25 years after its introduction in the Ugandan side of the lake. Nile perch then replaced the native fish diversity and irreversibly altered the ecosystem and its role to lakeshore societies: it is now a prised export product that supports millions of livelihoods. The delay in the Nile perch boom led to a hunt for triggers of the sudden boom and generated several hypotheses regarding its growth at low abundances – all hypotheses having important implications for the management of Nile perch stocks. We use logistic growth as a parsimonious null model to predict when the Nile perch invasion should have been expected, given its growth rate, initial stock size and introduction year. We find the first exponential growth phase can explain the timing of the perch boom at the scale of Lake Victoria, suggesting that complex mechanisms are not necessary to explain the Nile perch invasion or its timing. However, the boom started in Kenya before Uganda, indicating perhaps that Allee effects act at smaller scales than that of the whole Lake. The Nile perch invasion of other lakes indicates that habitat differences may also have an effect on invasion success. Our results suggest there is probably no single management strategy applicable to the whole lake that would lead to both efficient and sustainable exploitation of its resources. PMID:24204684

  9. A modeling study of perched water phenomena in the vadose zone

    SciTech Connect

    Wu, Y.-S.; Ritchey, A. C.; Bodvarsson, G. S.

    1997-12-16

    The presence of perched water bodies in the vicinity of the potential repository at Yucca Mountain has many implications, and however, it may provide insight into moisture movement, flow pathways, or surface infiltration history of the mountain. The first implication is that percolation flux does not travel vertically through the unsaturated zone to the water table, but has been trapped, blocked or diverted laterally. As a result, non-uniform recharge rates are expected at the water table. Another concern is that perched zones may divert water around low-permeability zeolitic lenses underlying the potential repository horizon. By-passing of these units, which are thought to have substantial capacity to retard radionuclide transport, could have important implications for the capability of the geologic system to mitigate radionuclide releases to the environment. We have conducted a series of 3-D modeling simulations to investigate the perched water occurrences at the Yucca Mountain site, using a numerical code and available perched water data from six boreholes. A spatially varying surface infiltration map (Flint et al., 1996) is used to describe areally distributed net infiltration at the model land surface. Perched water data observed in the field were used to calibrate the model in terms of matrix and fracture permeabilities, capillary functions, and relative permeabilities of gas within the perched zones. Calibrated parameter values were within the range of field and laboratory measurements. The steady-state simulation results are in agreement with the observed perched water data in terms of water saturation and perched water locations. Furthermore, the results of a transient numerical pumping test conducted, using a 3-D submodel, matched water level data observed during field pumping tests. Perched water may occur where percolation flux exceeds the capacity of the geologic media to transmit flux in unsaturated zones. The conceptual model of water movement in the

  10. The toxic effects on the stress and immune responses in juvenile rockfish, Sebastes schlegelii exposed to hexavalent chromium.

    PubMed

    Kim, Jun-Hwan; Kang, Ju-Chan

    2016-04-01

    Juvenile Sebastes schlegelii (mean length 13.7±1.7cm, and mean weight 55.6±4.8g) were exposed for 4 weeks with the different levels of dietary chromium (Cr(6+)) concentration (0, 30, 60, 120 and 200mg/L). The plasma cortisol and heat shock protein 70 was evaluated as stress indicators. Plasma cortisol was significantly increased in response to the dietary chromium exposure over 120mg/kg at 2 and 4 weeks. Heat shock protein 70 was also notably increased over 120mg/kg at 2 weeks and over 60mg/kg at 4 weeks. In the immune response, immunoglobulin M was considerably increased in the concentration of 240mg/kg at 2 weeks and over 120mg/kg at 4 weeks. Lysozyme activity was considerably induced by the dietary hexavalent chromium exposure. A significant increase in plasma lysozyme activity was observed at 240mg/kg after 2 weeks and over 60mg/kg after 4 weeks, kidney lysozyme was also increased over 120mg/kg at 2 and 4 weeks. The results demonstrate that dietary Cr exposure can induce a significant stress and immune stimulation. PMID:26991846

  11. Depletion of praziquantel in plasma and muscle tissue of cultured rockfish Sebastes schlegeli after oral and bath treatment.

    PubMed

    Kim, K H; Kim, C S; Kim, J W

    2001-08-01

    Depletion of praziquantel in plasma and muscle tissue after oral and bath treatments was studied in cultured rockfish Sebastes schlegeli. In the oral treatment, a single dose of 400 mg praziquantel kg(-1) body weight was administered by intubation of the stomach. A bath treatment at 100 ppm of praziquantel for 4 min was also carried out. Plasma and muscle tissue samples were collected at 3, 6, 12, 24, 48, 72, 96, 120, 144 and 168 h post-treatment, and analyzed for praziquantel by reversed-phase HPLC using diazepam as the internal standard. Following oral treatment, praziquantel was detected in plasma and muscle tissue until 96 h after treatment. In plasma the praziquantel concentration was highest at the 9 h sampling time and declined sharply at the 48 h sampling point. The concentrations of praziquantel in the muscle tissue were lower than those in the plasma, and the highest value was found at the 9 h sampling time. Following bath treatment, praziquantel was found in plasma and muscle tissue until 72 and 24 h after treatment, respectively. In plasma the praziquantel concentration was highest at the 12 h sampling time and declined sharply thereafter. The concentrations of praziquantel in the muscle tissue were significantly lower than those in the plasma, and the concentrations declined consistently with time. PMID:11558729

  12. Feasibility of partial replacement of fishmeal with proteins from different sources in diets of Korean rockfish ( Sebastes schlegeli)

    NASA Astrophysics Data System (ADS)

    Yan, Quangen; Zhu, Xiaoming; Yang, Yunxia; Han, Dong; Xie, Shouqi

    2014-12-01

    An 8-week feeding experiment was conducted in an indoor recirculation seawater system to investigate the effects of partial replacement of dietary fishmeal with proteins from five sources on the growth performance and feed utilization of Sebastes schlegeli. Six isonitrogenous and isoenergetic diets were formulated using fishmeal (FM, the control) as sole protein source, or proteins from five sources including poultry by-product meal (PBM), meat and bone meal (MBM), soybean meal (SBM), cottonseed meal (CSM) and canola meal (CNM). Fifteen percent of the crude protein provided by fish meal was replaced, respectively. The results showed that the differences in specific growth rate (SGR) and survival rate (SR) among fish fed PBM, MBM, SBM, CSM and whole FM diets were not significant. However, SGR and SR of fish fed CNM diet was significantly lower than that of other treatments. Feeding rate, feed conversion, nutrient retention showed similar patterns to that of growth. Fish fed CSM and CNM showed significantly lower apparent digestibility coefficient (ADC) of dry matter and gross energy than those fed others while fish fed CNM showed lower ADC of crude protein than those fed others ( P<0.05). These results suggested that it was feasible to substitute 15% dietary protein provided by fishmeal with PBM, MBM, SBM and CSM, respectively, but not with CNM as the replacement with CNM reduced fish growth and feed utilization.

  13. Immunological and health-state parameters in the Patagonian rockfish Sebastes oculatus. Their relation to chemical stressors and seasonal changes.

    PubMed

    Sueiro, Maria Cruz; Palacios, María Gabriela

    2016-01-01

    We present the results of a field study that evaluates whether exposure to anthropogenic pollution impacts immunological and health-state parameters of wild marine fish during the breeding and non-breeding periods. We assessed aspects of innate immunity (bactericidal capacity, bacterial agglutination, and leukocyte profile) and general health-related parameters (neutrophil to lymphocyte ratio, hematocrit, and condition factor) in the Patagonian rockfish (Sebastes oculatus) sampled from polluted (exposed) and reference (control) sites during winter (i.e., coolest temperatures and active reproductive period) and in summer (i.e., warmest temperatures and non-reproductive period). Results showed lower bactericidal competence, hematocrit, and condition factor in fish from exposed sites independently of season, whereas lymphocytes were higher and monocytes lower at the exposed site only during summer. Moreover, fish sampled during winter displayed lower bactericidal competence, hematocrit, and condition factor than those sampled in summer independently of site, whereas the opposite pattern was found for bacterial agglutination. These results could be explained by life-history theory, which predicts a re-allocation of resources between reproduction and other physiological functions (including immunity) during the most energetically demanding season. The present results show an alteration in immunological and health-state parameters of wild marine fish exposed to anthropogenic pollution independently of season, which could potentially result in higher susceptibility to disease and in turn population decline. PMID:26584758

  14. Special structure of mitochondrial DNA control region and phylogenetic relationship among individuals of the black rockfish, Sebastes schlegelii.

    PubMed

    Zhang, Hui; Zhang, Yan; Zhang, Xiumei; Song, Na; Gao, Tianxiang

    2013-04-01

    This study deals with the structure of mitochondrial DNA (mtDNA) control region (CR) of the black rockfish, Sebastes schlegelii. Two termination-associated sequences (TASs), two complementary termination-associated sequences (cTASs), and conserved sequence block (CSB), such as CSB-F, CSB-E, CSB-D, CSB1, CSB2, and CSB3, were detected in S. schlegelii. The results indicated that the structures of these blocks are similar to most marine fishes, but it is special that there are two TASs and two cTASs in the CR of S. schlegelii. One conserved region was found from 450 bp to the end of the CR, which is also a special feature of S. schlegelii. All sequences of CSB1, CSB2, and CSB3 blocks are the consensus among different individuals, which is quite different from most vertebrates. In addition, the complete mtDNA CR sequences and the first 449 bp of the CR are used to analyze the phylogenetic relationships of S. schlegelii. The phylogenetic trees show a lack of genetic structure among individuals. This study also indicated a signal that the genetic diversity might be similar between the wild and cultured individuals, which may be helpful to the fisheries management. PMID:23072475

  15. Effects of perch access and age on physiological measures of stress in caged White Leghorn pullets.

    PubMed

    Yan, F F; Hester, P Y; Enneking, S A; Cheng, H W

    2013-11-01

    The neuroendocrine system controls animals' adaptability to their environments by releasing psychotropic compounds such as catecholamines [epinephrine (EP), norepinephrine (NE), and dopamine (DA)], corticosterone (CORT), and serotonin (5-hydroxytryptamine or 5-HT). Changes of these neuroendocrine compounds have been used as biomarkers of animals' stress responses associated with their well-being. Assuming that pullets, like laying hens, are highly motivated to perch, we hypothesize that pullets with access to perches will experience less stress than pullets that never have access to perches. The objective of this study was to examine the effects of perch access and age on physiological measurements of stress in White Leghorn pullets housed in conventional cages. Hatchlings (n = 1,064) were randomly assigned to 28 cages. Two parallel metal round perches were installed in each of 14 cages assigned the perch treatment, whereas control cages were without perches. Two birds per cage were bled at wk 4, 6, and 12 wk of age. Plasma levels of CORT, DA, EP, and NE, blood concentrations of 5-HT and Trp, and heterophil to lymphocyte ratios were measured. Data were analyzed using a 2-way ANOVA. The perch treatment or its interaction with age did not affect any parameter measured in the study. The increase in the concentrations of circulating EP, NE, 5-HT (numerical increase at 4 wk), and Trp in 4- and 6-wk-old pullets compared with 12-wk-old pullets is unclear, but may have been due to acute handling stress at younger ages. In contrast, concentrations of DA were less at 4 wk compared with levels at 6 and 12 wk of age. Plasma CORT levels and the heterophil to lymphocyte ratio, indicators of long-term stress, were unaffected by age (P = 0.07 and 0.49, respectively). These results indicated that age, but not perch access, affects neuroendocrine homeostasis in White Leghorn pullets. Pullets that were never exposed to perches showed no evidence of eliciting a stress response. PMID

  16. Changes in yellow perch (Perca flavescens) populations of Lake Michigan, 1954-75

    USGS Publications Warehouse

    Wells, LaRue

    1977-01-01

    In the early and mid-1960s the abundance of yellow perch (Perca flavescens) in Lake Michigan declined abruptly. The decline began in the northern part of the lake and spread progressively southward. Circumstantial evidence suggests that the nonnative alewife (Alosa pseudoharengus), by interfering with perch reproduction, was the primary cause of the decline. The alewife was first reported in northeastern Lake Michigan in 1949, and had become extremely abundant throughout the lake before an enormous die-off in 1967 reduced its numbers by an estimated 70%. An intensive fishery hastened the decline of perch. In most areas the decline was immediately preceded by a period of conspicuously high commercial production. This high production appears to have been related in part to increased growth rates of perch resulting from much lower density of younger fish. A sport fishery for perch in shallow water collapsed a few years before the species declined in abundance. The most logical explanation is that heavy concentrations of alewives physically displaced the perch from nearshore areas. Although perch populations increased in some areas in the 1970s, a full recovery is unlikely unless alewife numbers are further reduced.

  17. Intraspecific variation in gill morphology of juvenile Nile perch, Lates niloticus, in Lake Nabugabo, Uganda

    USGS Publications Warehouse

    Paterson, Jaclyn A.; Chapman, Lauren J.; Schofield, Pamela J.

    2010-01-01

    Several studies have demonstrated intraspecific variation in fish gill size that relates to variation in dissolved oxygen (DO) availability across habitats. In Lake Nabugabo, East Africa, ecological change over the past 12 years has coincided with a shift in the distribution of introduced Nile perch such that a larger proportion of the population now inhabits waters in or near wetland ecotones where DO is lower than in open waters of the lake. In this study, we compared gill size of juvenile Nile perch between wetland and exposed (open-water) habitats of Lake Nabugabo in 2007, as well as between Nile perch collected in 1996 and 2007. For Nile perch of Lake Nabugabo [<20 cm total length (TL)], there was a significant habitat effect on some gill traits. In general, fish from wetland habitats were characterized by a longer total gill filament length and average gill filament length than conspecifics from exposed habitats. Nile perch collected from wetland areas in 2007 had significantly larger gills (total gill filament length) than Nile perch collected in 1996, but there was no difference detected between Nile perch collected from exposed sites in 2007 and conspecifics collected in 1996.

  18. Food habits of stunted and non-stunted white perch (Morone americana)

    USGS Publications Warehouse

    Gosch, N.J.C.; Stittie, J.R.; Pope, K.L.

    2010-01-01

    We studied food habits of white perch (Morone americana) from two populations with different stable states (stunted [Branched Oak Lake, Nebraska] and nonstunted [Pawnee Lake, Nebraska]) to determine if change in food habits of white perch is likely to occur in situations where a stunted white perch population is altered to a nonstunted state and vice versa. Three approaches were used to quantitatively describe seasonal (spring = March-May, summer = June-August, autumn = September-November) diets of white perch - 1) frequency of occurrence, 2) percentage of composition by volume, and 3) mean stomach fullness. White perch diets were dominated by cladocerans and dipterans in both reservoirs during all seasons. Fish egg predation was similar between reservoirs, and white perch rarely consumed fishes in either the stunted or the non-stunted population. Shifting a white perch population between stunted and non-stunted states will likely cause little or no change in food habits; fish in both states will primarily consume invertebrates.

  19. The effect of perch access during pullet rearing and egg laying on physiological measurements of stress in 71-week-old White Leghorns

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Egg laying strains of chickens have a strong motivation to perch. Providing caged chickens with perches allows them to perform their natural perching instinct and also improves their musculoskeletal health due to exercise. Little is known about the effect of perch access by hens on physiological mea...

  20. Perched-Water Analysis Related to Deep Vadose Zone Contaminant Transport and Impact to Groundwater

    SciTech Connect

    Oostrom, Martinus; Truex, Michael J.; Carroll, KC; Chronister, Glen B.

    2013-11-15

    Perched-water conditions have been observed in the vadose zone above a fine-grained zone that is located just a few meters above the water table beneath the B-complex at the Hanford Site. The perched water, containing elevated concentrations of uranium and technetium-99, is important to consider in evaluating the future flux of contaminated water into the groundwater. A study was conducted to examine the perched-water conditions and quantitatively evaluate 1) factors that control perching behavior, 2) contaminant flux toward groundwater, and, 3) associated groundwater impact. Based on the current vertical transport pathways and large areal extent of the perched system, the evaluation was conducted using a one-dimensional (1-D) analysis. Steady-state scoping calculations showed that the perching-layer hydraulic conductivity is likely to be up to two orders of magnitude less than the base case value obtained from Hanford site literature. Numerical flow and transport simulations provided both steady-state and transient system estimates of water and contaminant behavior and were used to further refine the range of conditions consistent with current observations of perched water height and to provide estimates of future water and contaminant flux to groundwater. With a recharge rate of 6 cm/yr, representative of current disturbed surface conditions, contaminant flux from the perched water occurs over a time interval of tens of years. However, if the recharge rate is 0.35 cm/yr, representative of returning recharge to pre-Hanford Site levels, the contaminant flux into the groundwater is spread over hundreds of years. It was also demonstrated that removal of perched water by pumping would reduce the flux of water (and associated contaminants) to the groundwater, thereby impacting the long-term rate of contaminant movement to the groundwater.

  1. A robin perches on a branch at KSC

    NASA Technical Reports Server (NTRS)

    1999-01-01

    A robin perches on a branch in the Merritt Island National Wildlife Refuge, which shares a boundary with the space center. Robins range throughout North America, from Alaska to Florida. Although considered a harbinger of spring, they do winter in northern states, frequenting cedar bogs and swamps. They also winter in Florida, where they often can be seen in flocks of hundreds near KSC and the wildlife refuge, which comprises 92,000 acres, ranging from hardwood hammocks and pine flatwoods to fresh-water impoundments, salt-water estuaries and brackish marshes. The diverse landscape provides habitat for more than 310 species of birds, 25 mammals, 117 fishes, and 65 amphibians and reptiles, including such endangered species as Southern bald eagles, wood storks, Florida scrub jays, Atlantic loggerhead and leatherback turtles, osprey, and nearly 5,000 alligators.

  2. Lake phosphorus loading form septic systems by seasonally perched groundwater

    USGS Publications Warehouse

    Gilliom, R.J.; Patmont, C.R.

    1983-01-01

    The movement of effluent phosphorus (P) from old septic systems by seasonally perched groundwater was investigated. A previous study indicated a correlation between P loadings and the presence of old homes. Water samples were taken from shallow wells installed 10 to 50 m downgradient from seven septic systems 20 to 40 years old. The equivalent volumetric fraction of each sample consisting of undiluted effluent was estimated from chloride concentration. A Monte Carlo analysis was used to account for the various sources of uncertainty. Movement of diluted septic effluent to the lake was common, but transport of more than 1% of effluent P through the soil was probable for only 4 of 26 samples. The greatest apparent P movement was associated with persistently saturated conditions.

  3. Reproductive health of yellow perch, Perca flavescens, in Chesapeake Bay Tributaries

    USGS Publications Warehouse

    Blazer, Vicki; Pinkney, A.E.; Uphoff, James H.

    2013-01-01

    Yellow perch live in creeks, rivers, ponds, lakes, and estuaries across the central and eastern United States and Canada. In Chesapeake Bay, they tolerate salinities up to one-third that of seawater. The adults reside in the brackish waters of the bay’s tributaries and migrate upstream to spawn. Yellow perch are eagerly sought by recreational fishermen for their excellent taste and, because their late winter spawning runs are the earliest of the year, they are regarded as a harbinger of spring. Yellow perch also support a small but valuable, tightly regulated commercial fishery in the part of Chesapeake Bay that lies in Maryland.

  4. Does macroalgal vegetation cover influence post-settlement survival and recruitment potential of juvenile black rockfish Sebastes cheni?

    NASA Astrophysics Data System (ADS)

    Kamimura, Yasuhiro; Shoji, Jun

    2013-09-01

    Seasonal change in vegetation coverage affected cohort-specific mortality of post-settlement juvenile black rockfish Sebastes cheni in a temperate macroalgal bed. A total of 14 fish and environmental surveys were conducted at an interval of one to two weeks from February to May, 2008 in the central Seto Inland Sea, southwestern Japan. The birth date of S. cheni was estimated by use of the otolith daily rings and then fish were divided into 7 cohorts (A to F), each covering a 7-day birth date period. Cohort-specific growth coefficient (G, d-1) of juvenile S. cheni from 20 to 60 mm in total length (TL) ranged between 0.031 and 0.048 and mortality coefficient (M, d-1) between 0.038 and 0.081, with significant increases in both values as the season progressed. The ratio of G:M, which is a proxy of the recruitment potential, ranged between 0.59 and 0.99 and was lower in later cohorts. Water temperature increased from 10.9 °C in March to 18.2 °C in May and vegetation coverage (bulk volume of Sargassum spp., %: as an index of the function for predation refuge) decreased from 60% in March to 2% in May. The later cohorts of juvenile S. cheni had high growth and mortality rates related to high temperature and low vegetation coverage. Since the seasonal increase in M was greater than that of G, the recruitment potential of the later cohorts was lower than that of the earlier cohorts.

  5. Isolation and expression analysis of FTZ-F1 encoding gene of black rock fish ( Sebastes schlegelii)

    NASA Astrophysics Data System (ADS)

    Shafi, Muhammad; Wang, Yanan; Zhou, Xiaosu; Ma, Liman; Muhammad, Faiz; Qi, Jie; Zhang, Quanqi

    2013-03-01

    Sex related FTZ-F1 is a transcriptional factor regulating the expression of fushi tarazu (a member of the orphan nuclear receptors) gene. In this study, FTZ-F1 gene ( FTZ-F1) was isolated from the testis of black rockfish ( Sebastes schlegeli) by homology cloning. The full-length cDNA of S. schlegeli FTZ-F1 ( ssFTZ-F1) contained a 232bp 5' UTR, a 1449bp ORF encoding FTZ-F1 (482 amino acid residules in length) with an estimated molecular weight of 5.4kD and a 105bp 3' UTR. Sequence, tissue distribution and phylogenic analysis showed that ssFTZ-F1 belonged to FTZ group, holding highly conserved regions including I, II and III FTZ-F1 boxes and an AF-2 hexamer. Relatively high expression was observed at different larva stages. In juveniles (105 days old), the transcript of ssFTZ-F1 can be detected in all tissues and the abuncance of the gene transcript in testis, ovary, spleen and brain was higher than that in other tissues. In mature fish, the abundance of gene transcript was higher in testis, ovary, spleen and brain than that in liver (trace amount), and the gene was not transcribed in other tissues. The highest abundance of gene transcript was always observed in gonads of both juvenile and mature fish. In addition, the abundance of gene transcript in male tissues were higher than that in female tissue counterparts ( P<0.05).

  6. Methods to assess impacts on Hudson River white perch, October 1, 1978-September 30, 1979

    SciTech Connect

    Barnthouse, L.W.; Kirk, B.L.; Kumar, K.D.; Van Winkle, W.; Vaughan, D.S.

    1980-05-01

    This report is a brief description of the work done during the period October 1, 1978 to September 30, 1979. During this period, a final draft topical report entitled ''Evaluation of Impingement Losses of White Perch at the Indian Point Nuclear Station and Other Hudson River Power Plants'' (NUREG/CR-1100) was completed. In addition, special studies of white perch entrainment at Hudson River powder plants, of density-dependent growth in the Hudson River white perch population, and of data on the white perch populations of the Delaware and Chesapeake systems were performed. Most of the results obtained during FY 79 were incorporated in testimony written for the ongoing adjudicatory hearing on the Hudson River Power Case (Region II). 13 tabs.

  7. Perched water tables on hillsides in western Oregon: II. Preferential downslope movement of water and anions.

    USGS Publications Warehouse

    Hammermeister, D.P.; Kling, G.F.; Vomocil, J.A.

    1982-01-01

    Reports the results of experiments which were carried out to investigate the flow of solutes and water from buried line sources in and above perched water tables on three different hillsides in W Oregon. -from Authors

  8. Perching and takeoff of a robotic insect on overhangs using switchable electrostatic adhesion.

    PubMed

    Graule, M A; Chirarattananon, P; Fuller, S B; Jafferis, N T; Ma, K Y; Spenko, M; Kornbluh, R; Wood, R J

    2016-05-20

    For aerial robots, maintaining a high vantage point for an extended time is crucial in many applications. However, available on-board power and mechanical fatigue constrain their flight time, especially for smaller, battery-powered aircraft. Perching on elevated structures is a biologically inspired approach to overcome these limitations. Previous perching robots have required specific material properties for the landing sites, such as surface asperities for spines, or ferromagnetism. We describe a switchable electroadhesive that enables controlled perching and detachment on nearly any material while requiring approximately three orders of magnitude less power than required to sustain flight. These electroadhesives are designed, characterized, and used to demonstrate a flying robotic insect able to robustly perch on a wide range of materials, including glass, wood, and a natural leaf. PMID:27199427

  9. Characterization and Extraction of Uranium Contamination Perched within the Deep Vadose Zone at the Hanford Site, Washington State

    NASA Astrophysics Data System (ADS)

    Williams, B. A.; Rohay, V. J.; Benecke, M. W.; Chronister, G. B.; Doornbos, M. H.; Morse, J.

    2012-12-01

    A highly contaminated perched water zone has been discovered in the deep vadose zone above the unconfined aquifer during drilling of wells to characterize groundwater contamination within the 200 East Area of the U.S. Department of Energy's Hanford Site in southeast Washington. The perched water, which contains nitrate, uranium, and technetium-99 at concentrations that have exceeded 100,000 μg/L, 70,000 μg/L, and 45,000 pCi/L respectively, is providing contamination to the underlying unconfined aquifer. A perched zone extraction well has been installed and is successfully recovering the contaminated perched water as an early remedial measure to reduce impacts to the unconfined aquifer. The integration and interpretation of various borehole hydrogeologic, geochemical, and geophysical data sets obtained during drilling facilitated the delineation of the perching horizon and determination of the nature and extent of the perched contamination. Integration of the borehole geologic and geophysical logs defined the structural elevation and thickness of the perching low permeability silt interval. Borehole geophysical moisture logs, gamma logs, and sample data allowed detailed determination of the elevation and thickness of the oversaturated zone above the perching horizon, and the extent and magnitude of the radiological uranium contamination within the perching interval. Together, these data sets resolved the nature of the perching horizon and the location and extent of the contaminated perched water within the perching zone, allowing an estimation of remaining contaminant extent. The resulting conceptual model indicates that the contaminated perched water is contained within a localized sand lens deposited in a structural low on top of a semi-regional low-permeability silt layer. The top of the sand lens is approximately 72 m (235 ft) below ground surface; the maximum thickness of the sand lens is approximately 3 m (10 ft). The lateral and vertical extent of the

  10. Susceptibility of Koi and Yellow Perch to infectious hematopoietic necrosis virus by experimental exposure

    USGS Publications Warehouse

    Palmer, Alexander D.; Emmenegger, Eveline J.

    2014-01-01

    Infectious hematopoietic necrosis virus (IHNV) is a novirhabdoviral pathogen that originated in western North America among anadromous Pacific salmonids. Severe disease epidemics in the late 1970s resulting from IHNV's invasion into farmed Rainbow Trout Oncorhynchus mykiss in North America, Asia, and Europe emphasized IHNV's ability to adapt to new hosts under varying rearing conditions. Yellow Perch Perca flavescens and Koi Carp Cyprinus carpio (hereafter, “Koi”) are aquaculture-reared fish that are highly valued in sport fisheries and the ornamental fish trade, respectively, but it is unknown whether these fish species are vulnerable to IHNV infection. In this study, we exposed Yellow Perch, Koi, and steelhead (anadromous Rainbow Trout) to IHNV by intraperitoneal injection (106 PFU/fish) and by immersion (5.7×105 PFU/mL) for 7 h, and monitored fish for 28 d. The extended immersion exposure and high virus concentrations used in the challenges were to determine if the tested fish had any level of susceptibility. After experimental exposure, Yellow Perch and Koi experienced low mortality (35%). Virus was found in dead fish of all species tested and in surviving Yellow Perch by plaque assay and quantitative reverse transcription polymerase chain reaction (qPCR), with a higher prevalence in Yellow Perch than Koi. Infectious virus was also detected in Yellow Perch out to 5 d after bath challenge. These findings indicate that Yellow Perch and Koi are highly resistant to IHNV disease under the conditions tested, but Yellow Perch are susceptible to infection and may serve as possible virus carriers.

  11. Soft Perches in an Aviary System Reduce Incidence of Keel Bone Damage in Laying Hens

    PubMed Central

    Stratmann, Ariane; Fröhlich, Ernst K. F.; Harlander-Matauschek, Alexandra; Schrader, Lars; Toscano, Michael J.; Würbel, Hanno; Gebhardt-Henrich, Sabine G.

    2015-01-01

    Keel bone fractures and deviations are one of the major welfare and health issues in commercial laying hens. In non-cage housing systems like aviaries, falls and collisions with perches and other parts of the housing system are assumed to be one of the main causes for the high incidence of keel bone damage. The objectives of this study were to investigate the effectiveness of a soft perch material to reduce keel bone fractures and deviations in white (Dekalb White) and brown laying hens (ISA Brown) kept in an aviary system under commercial conditions. In half of 20 pens, all hard, metal perches were covered with a soft polyurethane material. Palpation of 20 hens per pen was conducted at 18, 21, 23, 30, 38, 44 and 64 weeks of age. Production data including egg laying rate, floor eggs, mortality and feed consumption were collected over the whole laying period. Feather condition and body mass was assessed twice per laying period. The results revealed that pens with soft perches had a reduced number of keel bone fractures and deviations. Also, an interaction between hybrid and age indicated that the ISA hybrid had more fractured keel bones and fewer non-damaged keel bones compared with the DW hybrid at 18 weeks of age, a response that was reversed at the end of the experiment. This is the first study providing evidence for the effectiveness of a soft perch material within a commercial setting. Due to its compressible material soft perches are likely to absorb kinetic energy occurring during collisions and increase the spread of pressure on the keel bone during perching, providing a mechanism to reduce keel bone fractures and deviations, respectively. In combination with genetic selection for more resilient bones and new housing design, perch material is a promising tool to reduce keel bone damage in commercial systems. PMID:25811980

  12. Investigation of groundwater recirculation for the removal of RDX from the Pantex Plant perched aquifer

    SciTech Connect

    Woods, A.L.; Barnes, D.L.; Boles, K.M.; Charbeneau, R.J.; Black, S.; Rainwater, K.

    1998-07-01

    The Pantex Plant near Amarillo, Texas, is a US Department of Energy (DOE) facility that has been in operation since 1942. Past and present operations at Pantex include the creation of chemical high explosives components for nuclear weapons and assembly and disassembly of nuclear weapons. The Pantex Plant is underlain by the Ogallala aquifer, which in this area, consists of the main water-bearing unit and a perched water zone. These are separated by a fine-grained zone of low permeability. Multiple contaminant plumes containing high explosive (HE) compounds have been detected in the perched aquifer beneath the plant. The occurrence of these contaminants is the result of past waste disposal practices at the facility. RDX is an HE compound, which has been detected in the groundwater of the perched aquifer at significant concentrations. A pilot-scale, dual-phase extraction treatment system has been installed at one location at the plant, east of Zone 12, to test the effectiveness of such a system on the removal of these contaminants from the subsurface. A tracer test using a conservative tracer, bromide (Br), was conducted at the treatment site in 1996. In addition to the bromide, RDX and water elevations in the aquifer were monitored. Using data from the tracer test and other relevant data from the investigations at Pantex, flow and contaminant transport in the perched aquifer were simulated with groundwater models. The flow was modeled using MODFLOW and the transport of contaminants in the aqueous phase was modeled using MT3D. Modeling the perched aquifer had been conducted to characterize the flow in the perched aquifer; estimate RDX retardation in the perched aquifer; and evaluate the use of groundwater re-circulation to enhance the extraction of RDX from the perched aquifer.

  13. Nitrate-nitrogen concentrations in the perched ground water under seepage-irrigated potato cropping systems.

    PubMed

    Munoz-Arboleda, F; Mylavarapu, R; Hutchinson, C; Portier, K

    2008-01-01

    Excessive nitrogen rates for potato production in northeast Florida have been declared as a potential source of nitrate pollution in the St. Johns River watershed. This 3-yr study examined the effect of N rates (0, 168, and 280 kg ha(-1)) split between planting and 40 d after planting on the NO(3)-N concentration in the perched ground water under potato (Solanum tuberosum cv. Atlantic) in rotation with sorghum sudan grass hybrid (Sorghum vulgare x Sorghum vulgare var. sudanese, cv. SX17), cowpea (Vigna unguiculata cv. Iron Clay), and greenbean (Phaseolus vulgare cv. Espada). Soil solution from the root zone and water from the perched ground water under potato were sampled periodically using lysimeters and wells, respectively. Fertilization at planting increased the NO(3)-N concentration in the perched ground water, but no effect of the legumes in rotation with potatoes on nitrate leaching was detected. Fertilization of green bean increased NO(3)-N concentration in the perched ground water under potato planted in the following season. The NO(3)-N concentration in the soil solution within the potato root zone followed a similar pattern to that of the perched ground water but with higher initial values. The NO(3)-N concentration in the perched ground water was proportional to the rainfall magnitude after potato planting. A significant increase in NO(3)-N concentration in the perched ground water under cowpea planted in summer after potato was detected for the side-dressing of 168 kg ha(-1) N applied to potato 40 d after planting but not at the 56 kg ha(-1) N side-dress. Elevation in NO(3)-N concentration in the perched ground water under sorghum was not significant, supporting its use as an effective N catch crop. PMID:18268301

  14. Perched water tables on hillsides in western Oregon: I. Some factors affecting their development and longevity.

    USGS Publications Warehouse

    Hammermeister, D.P.; Kling, G.F.; Vomocil, J.A.

    1982-01-01

    Perched water tables on hillsides located on the western border of the Willamette Valley in Oregon in some cases have the potential to transport pollutants from either domestic or agricultural sources downslope to streams, ponds, or reservoirs, resulting in the deterioration of the quality of these waters. Some factors responsible for the development and longevity of these potentially problem-causing perched water tables on three hillsides were examined. -from Authors

  15. Susceptibility of Australian Redfin Perch Perca fluviatilis Experimentally Challenged with Epizootic Hematopoietic Necrosis Virus (EHNV).

    PubMed

    Becker, Joy A; Tweedie, Alison; Gilligan, Dean; Asmus, Martin; Whittington, Richard J

    2016-06-01

    The ranavirus epizootic hematopoietic necrosis virus (EHNV) is endemic to Australia and is listed by the Office International des Epizooties. Clinical outbreaks have only been observed in wild populations of Redfin Perch Perca fluviatilis (also known as Eurasian Perch) and farmed populations of Rainbow Trout Oncorhynchus mykiss. The initial outbreaks of EHNV describe all age-classes of Redfin Perch as being susceptible and can lead to epidemic fish kills. Subsequently, experimental challenge studies using either cohabitation with the virus or injection exposures resulted in mixed susceptibilities across various age-groupings of Redfin Perch. We used an experimental bath challenge model to investigate the susceptibility of Redfin Perch collected from areas with and without a history of EHNV outbreaks. The median survival time for fish from Blowering Dam in New South Wales, a zone with a history of EHNV outbreaks, was 35 d, compared with fish from other areas, which had a median survival between 12 and 28 d postexposure. Redfin Perch from Blowering Dam demonstrated an increased mortality associated with epizootic hematopoietic necrosis up to approximately day 14 after exposure, and then there was a significantly reduced risk of mortality until the end of the trial compared with all other fish. Redfin Perch from Blowering Dam had markedly decreased susceptibility to EHNV, and less than 40% became infected following a bath challenge. In contrast, Redfin Perch from neighboring (e.g., Bethungra Dam and Tarcutta Creek) and distant water bodies (e.g., in Western Australia) with no previous history of EHNVdisplayed moderate to high susceptibility when given a bath challenge. Potential factors for the observed changes in the host-pathogen relationship include intense positive selection pressure for resistant fish following epizootic hematopoietic necrosis outbreaks and subsequent attenuation of the virulence of the virus in resistant fish. Received August 22, 2015; accepted

  16. Growth and potential yield of perch (Perca spp.) in selected areas of Lake Baikal and the Laurentian Great Lakes

    USGS Publications Warehouse

    O'Gorman, Robert; Bronte, Charles R.; Hatcher, Charles O.; Pronin, Nikolai M.; Sokolnikov, Yury

    1998-01-01

    We compared growth, mortality, and potential yield of Eurasian perch (Perca fluviatilis) from Chivirkui Bay in Lake Baikal with that of yellow perch (P. flavescens) from three areas of the Laurentian Great Lakes --Chequamegon Bay in Lake Superior, northeastern Lake Ontario, and southwestern Lake Erie. Graded mesh gill nets were fished in August to sample perch in lakes Baikal (1993), Ontario (1985-93), and Erie (1994). Bottom trawls were fished in July-August to sample perch in Lake Superior (1973-93). Adult yellow perch from the Laurentian Great Lakes were heavier at most lengths than adult Eurasian perch from Lake Baikal. The increase in body weight per unit increase in length was greatest in Lake Erie. Total annual mortality of perch was low in Lake Baikal (0.31), intermediate in lakes Superior (0.41) and Ontario (0.54), and high in Lake Erie (0.66). Annual fishing mortality (u) for perch in Lake Baikal was 60%-70% lower than that for perch in the Great Lakes. At ages 1-3, perch in Lake Erie were longer than those in lakes Baikal, Superior, and Ontario but at ages 4-9 perch in Lake Baikal were longer than those in the other lakes. Although Eurasian perch in Lake Baikal were longer at age 4 and older, growth in length, as measured by the Brody growth coefficient, K, was lower there than in the other lakes and was similar to that in Lake Superior; yellow perch in Lake Erie grew the fastest. Yield-per-recruit was lowest in Lake Erie and highest in Lake Superior. Potential yield was influenced by growth rates and fishing mortality.

  17. Fish community dynamics in northeastern Lake Ontario with emphasis on the growth and reproductive success of yellow perch (Perca flavescens) and white perch (Morone americana), 1978 to1997

    USGS Publications Warehouse

    O'Gorman, Robert; Burnett, John A.D.

    2001-01-01

    Fishes were assessed in Guffin, Chaumount, and Black River bays in northeastern Lake Ontario with a 7.9-m (headrope) bottom trawl during late September and early October, 1978 to 1997. Fish density declined in the early 1990s with sharp declines in abundance of spottail shiner (Notropis hudsonius), trout-perch (Percopsis omiscomaycus), and johnny darter (Etheostoma nigrum) occurring in 1993 to 1995. Rising numbers of piscivores, walleye (Stizostedion vitreum) and double-crested cormorant (Phalacrocorax auritus), increased predation pressure, presumably acting in concert with oligotrophication to lower fish density, particularly after 1991 when large numbers of adult alewife (Alosa pseudoharengus) no longer migrated to the northeast basin in spring. Annual mortality of yellow perch (Perca flavescens) from age 2 to 5 rose from 33% in 1980–83 to 65% in 1992–95 and was positively related to piscivore numbers (P = 0.01, r = 0.96, n = 5). Annual mortality of yellow perch from age 0 to 2 also peaked in 1992–95. Abundance of yellow perch YOY in fall varied 40 fold and was not related to water warming in spring (P = 0.45, r = −0.19, n = 18) but was negatively related to the abundance of adult alewives in spring (P = 0.04, r = −0.49, n = 18). Although yellow perch produced moderate to strong year classes each year during 1991–95, stock size failed to increase because of rapidly accelerating mortality. Fully 85% of the variation in mean length of yellow perch YOY was explained by a multiple regression model which included YOY abundance, mean total phosphorus, and cumulative degree days > 13.5°C (P < 0.01, n = 15). Abundance of white perch (Morone americana) YOY varied nearly 200 fold and was not related to water warming or spring alewife abundance (P > 0.15). Variation in mean length of white perch YOY was related to cumulative degree days > 15°C (P < 0.01, r = 0.69).

  18. Impact of impingement on the Hudson River white perch population. Final report

    SciTech Connect

    Barnthouse, L.W.; Van Winkle, W.; Kirk, B.L.; Vaughan, D.S.

    1982-02-01

    This report summarizes a series of analyses of the magnitude and biological significance of the impingement of white perch at the Indian Point Nuclear Generating Station and other Hudson River power plants. Included in these analyses were evaluations of: (1) two independent lines of evidence relating to the magnitude of impingement impacts on the Hudson River white perch population; (2) the additional impact caused by entrainment of white perch; (3) data relating to density-dependent growth among young-of-the-year white perch; (4) the feasibility of performing population-level analyses of impingement impacts on the white perch populations of Chesapeake Bay and the Delaware River; and (5) the feasibility of using simple food chain and food web models to evaluate community-level effects of impingement and entrainment. Estimated reductions in the abundances of the 1974 and 1975 white perch year classes, caused by impingement and entrainment, were high enough that the possibility of adverse long-term effects cannot be excluded.

  19. Modelling perched river recharge to the Wairau aquifer, New Zealand

    NASA Astrophysics Data System (ADS)

    Wöhling, Thomas; Gosses, Moritz; Wilson, Scott; Davidson, Peter

    2015-04-01

    The Wairau Aquifer in Marlborough, New Zealand, consists of coarse, high-conductive alluvial gravels and is almost exclusively recharged by surface water from the braided Wairau River. Recent experimental evidence suggests that the river is perched in the upstream recharge region of the aquifer. The aquifer serves as the major drinking water resource for the city of Blenheim and the surrounding settlements on the Wairau Plain and thus is a key natural resource for the region. To ensure the sustainable management of the resource, it is essential to better understand the limits and the mechanics of the recharge mechanism. One efficient way to test hypotheses of the mechanisms for river-groundwater exchange fluxes between the Wairau river and aquifer is by data integration into numerical models that mimic the flow regime of the coupled hydrological system. For that purpose, a Modflow model for the Wairau Aquifer was to set up and calibrated under summer conditions when the flow in the river is low and the aquifer is most vulnerable to over-allocation. The model is constrained by knowledge about the hydrogeological settings as well as observations of groundwater levels, river and spring flow gaugings, and analysis of aquifer pumping tests. Both historic and more recent concurrent river flow measurements under low flow conditions suggest that approximately 7-8 m³/s is recharged into the aquifer along the upper and middle reaches, at least partly under perched conditions. At the eastern side of the aquifer, a small proportion of that water flows back into the river, whereas a greater proportion emerges in springs. Spring creek is the largest spring with an estimated mean flow of 4.0 m³/s. This flow rate is vulnerable to an excessive decline in groundwater levels. The simulations with the calibrated flow model fit well to the observations of current mean groundwater heads as well as to mean Wairau river and Spring creek flows. Modeling results suggest a large spatial

  20. Assessing controls on perched saturated zones beneath the Idaho Nuclear Technology and Engineering Center, Idaho

    USGS Publications Warehouse

    Mirus, Benjamin B.; Perkins, Kim S.; Nimmo, John R.

    2011-01-01

    Waste byproducts associated with operations at the Idaho Nuclear Technology and Engineering Center (INTEC) have the potential to contaminate the eastern Snake River Plain (ESRP) aquifer. Recharge to the ESRP aquifer is controlled largely by the alternating stratigraphy of fractured volcanic rocks and sedimentary interbeds within the overlying vadose zone and by the availability of water at the surface. Beneath the INTEC facilities, localized zones of saturation perched on the sedimentary interbeds are of particular concern because they may facilitate accelerated transport of contaminants. The sources and timing of natural and anthropogenic recharge to the perched zones are poorly understood. Simple approaches for quantitative characterization of this complex, variably saturated flow system are needed to assess potential scenarios for contaminant transport under alternative remediation strategies. During 2009-2011, the U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Energy, employed data analysis and numerical simulations with a recently developed model of preferential flow to evaluate the sources and quantity of recharge to the perched zones. Piezometer, tensiometer, temperature, precipitation, and stream-discharge data were analyzed, with particular focus on the possibility of contributions to the perched zones from snowmelt and flow in the neighboring Big Lost River (BLR). Analysis of the timing and magnitude of subsurface dynamics indicate that streamflow provides local recharge to the shallow, intermediate, and deep perched saturated zones within 150 m of the BLR; at greater distances from the BLR the influence of streamflow on recharge is unclear. Perched water-level dynamics in most wells analyzed are consistent with findings from previous geochemical analyses, which suggest that a combination of annual snowmelt and anthropogenic sources (for example, leaky pipes and drainage ditches) contribute to recharge of shallow and

  1. A Southern Bald Eagle perches on a pole at KSC.

    NASA Technical Reports Server (NTRS)

    2000-01-01

    A Southern Bald Eagle perched on top of a utility pole searches the area. About a dozen bald eagles live in the Merritt Island National Wildlife Refuge, which shares a boundary with Kennedy Space Center. The Southern Bald Eagle ranges throughout Florida and along the coasts of California, Texas, Louisiana, and the south Atlantic states. Bald Eagles are listed as endangered in the U.S., except in five states where they are listed as threatened. The number of nesting pairs of the southern race once numbered several thousand; recent estimates are only 350-375. Most of the southern race nest in Florida. Eagles arrive at KSC during late summer and leave for the north in late spring. They move to nest sites in October and November and lay one to three eggs. The young fledge from February to April. The Refuge encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects.

  2. A Southern Bald Eagle perches on a pole at KSC.

    NASA Technical Reports Server (NTRS)

    2000-01-01

    A Southern Bald Eagle perches on top of a utility pole at Kennedy Space Center. About a dozen bald eagles live in the Merritt Island National Wildlife Refuge, which shares a boundary with Kennedy Space Center. The Southern Bald Eagle ranges throughout Florida and along the coasts of California, Texas, Louisiana, and the south Atlantic states. Bald Eagles are listed as endangered in the U.S., except in five states where they are listed as threatened. The number of nesting pairs of the southern race once numbered several thousand; recent estimates are only 350-375. Most of the southern race nest in Florida. Eagles arrive at KSC during late summer and leave for the north in late spring. They move to nest sites in October and November and lay one to three eggs. The young fledge from February to April. The Refuge encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects.

  3. Steady State Perched Groundwater Mounds on Thick Sublayers

    NASA Astrophysics Data System (ADS)

    Brock, Richard R.

    1982-04-01

    Perched mounds that develop beneath a strip recharge basin are considered using the potential theory for a saturated flow. The mounds are assumed to develop upon an aquitard or sublayer whose thickness is large enough so that the vertical velocity at the base of the mound does not vary with distance from the centerline of the basin. A finite difference technique was used to solve the potential theory, and 20 mound profiles were determined for K/KL = 10, 50, 100, 500 and R/K = 0.2, 0.35, 0.50, 0.65, 0.80. K/KL is the ratio of the permeabilities, and R is the recharge rate. These profiles are compared to those based on the approximate Dupuit-Forchheimer (DF) theory, and a criterion for the range of validity of the DF theory for predicting the maximum mount thickness H0 is derived. It is found that for a sufficiently large value of K/KL, which depends on R/K and the desired accuracy, the DF theory is adequate. For smaller values of K/KL the potential theory must be used. Equipotential lines and velocity distributions are presented for a typical case where the potential and DF mound profiles are quite different.

  4. Warming alters the body shape of European perch Perca fluviatilis.

    PubMed

    Rowiński, P K; Mateos-Gonzalez, F; Sandblom, E; Jutfelt, F; Ekström, A; Sundström, L F

    2015-11-01

    The consequences of elevated temperature on body shape were investigated by comparing European perch Perca fluviatilis from the Forsmark area of the Baltic Sea to P. fluviatilis from a nearby Biotest enclosure. The Biotest is a man-made enclosure within the Baltic Sea that has received warm water from a nuclear power plant since 1980, resulting in temperatures that are elevated 5-10 °C relative to the surrounding Baltic Sea. Sampled fish ranged from young-of-the-year to 14 years. Geometric morphometrics and multivariate statistical analysis revealed significant morphological differences between individuals of P. fluviatilis from these two habitats. Most importantly, relative shape changed with size, with small individuals of P. fluviatilis from Biotest being characterized by a deeper body shape and a larger caudal peduncle than the smaller Baltic individuals. In large specimens, smaller differences were found with Biotest individuals being more slender than Baltic individuals. These results show that, in order to have a full understanding of the biological effects of elevated temperatures, studies that cover the entire size range of organisms will be important. Apart from the direct influence of temperature on growth rate and body shape, other ecological factors affected by temperature are discussed as possible contributors to the observed differences between the two populations. PMID:26440307

  5. Evidence of hypoxic foraging forays by yellow perch (Perca flavescens) and potential consequences for prey consumption

    USGS Publications Warehouse

    Roberts, James J.; Grecay, Paul A.; Ludsin, Stuart A.; Pothoven, Steve A.; Vanderploeg, Henry A.; Höök, Tomas O.

    2012-01-01

    Previous studies in a variety of ecosystems have shown that ecologically and economically important benthic and bentho-pelagic fishes avoid hypoxic (−1) habitats by moving vertically or horizontally to more oxygenated areas. While avoidance of hypoxic conditions generally leads to a complete shift away from preferred benthic prey, some individual fish continue to consume benthic prey items in spite of bottom hypoxia, suggesting complex habitat utilisation and foraging patterns. For example, Lake Erie yellow perch (Perca flavescens) continue to consume benthic prey, despite being displaced vertically and horizontally by hypolimnetic hypoxia. We hypothesised that hypolimnetic hypoxia can negatively affect yellow perch by altering their distribution and inducing energetically expensive foraging behaviour. To test this hypothesis, we used drifting hydroacoustics and trawl sampling to quantify water column distribution, sub-daily vertical movement and foraging behaviour of yellow perch within hypoxic and normoxic habitats of Lake Erie’s central basin during August-September 2007. We also investigated the effects of rapid changes in ambient oxygen conditions on yellow perch consumption potential by exposing yellow perch to various static and fluctuating oxygen conditions in a controlled laboratory experiment. Our results indicate that, while yellow perch in general avoid hypoxic conditions, some individuals undertake foraging forays into hypoxic habitats where they experience greater fluctuations in abiotic conditions (pressure, temperature and oxygen concentration) than at normoxic sites. However, laboratory results suggest short-term exposure to low oxygen conditions did not negatively impact consumption potential of yellow perch. Detailed understanding of sub-daily individual behaviours may be crucial for determining interactive individual- and ecosystem-level effects of stressors such as hypoxia.

  6. Perched groundwater at the northwestern coast of Egypt: a case study of the Fuka Basin

    NASA Astrophysics Data System (ADS)

    Yousif, Mohamed; Bubenzer, Olaf

    2012-03-01

    Perched groundwater resources on the northwestern coast of Egypt have thus far been little studied. However, if replenished by rainwater, they can provide a considerable amount of renewable water, i.e., for sustainable irrigation. These resources are limited, show different salinity contents and are endangered by overuse, pollution and by the sea level rising in the context of global warming. This paper presents new climatic data, geomorphologic, geologic, geochemical and hydrological researches in combination with remote sensing and GIS applications from Fuka Basin. Fuka constitutes a special synclinal basin where the interbedded limestone and clays have been folded into gentle synclinal structures. Fractured Middle Miocene limestone represents the bearing formation for the perched groundwater. According to the hydrogeochemical analysis and the PHREEQC model, the aquifer is recharged during the winter season by rainwater from the surrounding tableland and the chemical evolution of the perched water is attributed to water-rock interaction and mixing of fresh water with sea water. The salinity of the perched water ranges from 2,126 to 2,644 mg/L whereas for the deep groundwater it reaches 9,800 mg/L. The study explores origin and potential of the perched groundwater of Fuka Basin and gives recommendations for a future sustainable use and further investigations.

  7. Water Transparency Drives Intra-Population Divergence in Eurasian Perch (Perca fluviatilis)

    PubMed Central

    Bartels, Pia; Hirsch, Philipp E.; Svanbäck, Richard; Eklöv, Peter

    2012-01-01

    Trait combinations that lead to a higher efficiency in resource utilization are important drivers of divergent natural selection and adaptive radiation. However, variation in environmental features might constrain foraging in complex ways and therefore impede the exploitation of critical resources. We tested the effect of water transparency on intra-population divergence in morphology of Eurasian perch (Perca fluviatilis) across seven lakes in central Sweden. Morphological divergence between near-shore littoral and open-water pelagic perch substantially increased with increasing water transparency. Reliance on littoral resources increased strongly with increasing water transparency in littoral populations, whereas littoral reliance was not affected by water transparency in pelagic populations. Despite the similar reliance on pelagic resources in pelagic populations along the water transparency gradient, the utilization of particular pelagic prey items differed with variation in water transparency in pelagic populations. Pelagic perch utilized cladocerans in lakes with high water transparency and copepods in lakes with low water transparency. We suggest that under impaired visual conditions low utilization of littoral resources by littoral perch and utilization of evasive copepods by pelagic perch may lead to changes in morphology. Our findings indicate that visual conditions can affect population divergence in predator populations through their effects on resource utilization. PMID:22912895

  8. Communication in the third dimension: song perch height of rivals affects singing response in nightingales.

    PubMed

    Sprau, Philipp; Roth, Tobias; Naguib, Marc; Amrhein, Valentin

    2012-01-01

    Many animals use long-range signals to compete over mates and resources. Optimal transmission can be achieved by choosing efficient signals, or by choosing adequate signalling perches and song posts. High signalling perches benefit sound transmission and reception, but may be more risky due to exposure to airborne predators. Perch height could thus reflect male quality, with individuals signalling at higher perches appearing as more threatening to rivals. Using playbacks on nightingales (Luscinia megarhynchos), we simulated rivals singing at the same height as residents, or singing three metres higher. Surprisingly, residents increased song output stronger, and, varying with future pairing success, overlapped more songs of the playback when rivals were singing at the same height than when they were singing higher. Other than expected, rivals singing at the same height may thus be experienced as more threatening than rivals singing at higher perches. Our study provides new evidence that territorial animals integrate information on signalling height and thus on vertical cues in their assessment of rivals. PMID:22448215

  9. Increasing Mercury in Yellow Perch at a Hotspot in Atlantic Canada, Kejimkujik National Park

    PubMed Central

    2010-01-01

    In the mid-1990s, yellow perch (Perca flavescens) and common loons (Gavia immer) from Kejimkujik National Park and National Historic Site (KNPNHS), Nova Scotia, Canada, had among the highest mercury (Hg) concentrations across North America. In 2006 and 2007, we re-examined 16 lakes to determine whether there have been changes in Hg in the loon’s preferred prey, yellow perch. Total Hg concentrations were measured in up to nine perch in each of three size classes (5−10 cm, 10−15 cm, and 15−20 cm) consumed by loons. Between 1996/97 and 2006/07, polynomial regressions indicated that Hg in yellow perch increased an average of 29% in ten lakes, decreased an average of 21% in three, and were unchanged in the remaining three lakes. In 2006/07, perch in 75% of the study lakes had Hg concentrations (standardized to 12-cm fish length) equal to or above the concentration (0.21 μg·g−1 ww) associated with a 50% reduction in maximum productivity of loons, compared with only 56% of these lakes in 1996/97. Mercury contamination currently poses a greater threat to loon health than a decade ago, and further reductions in anthropogenic emissions should be considered to reduce its impacts on ecosystem health. PMID:21062071

  10. Evaluating the low back biomechanics of three different office workstations: Seated, standing, and perching.

    PubMed

    Le, Peter; Marras, William S

    2016-09-01

    The objective of this study was to evaluate how different workstations may influence physical behavior in office work through motion and how that may affect spinal loads and discomfort. Twenty subjects performed a typing task in three different workstations (seated, standing, and perching) for one hour each. Measures of postural transitions, spinal loads, discomfort, and task performance were assessed in order to understand the effects of workstation interaction over time. Results indicated that standing had the most amount of motion (6-8 shifts/min), followed by perching (3-7 shifts/min), and then seating (<1 shift/min). Standing had the highest reports of discomfort and seating the least. However, spinal loads were highest in A/P shear during standing (190N posterior shear, 407N anterior shear) compared to perching (65N posterior shear, 288N anterior shear) and seating (106N posterior shear, 287 anterior shear). These loads are below the risk threshold for shear, but may still elicit a cumulative response. Perching may induce motion through supported mobility in the perching stool, whereas standing motion may be due to postural discomfort. Office workstation designs incorporating supported movement may represent a reasonable trade-off in the costs-benefits between seating and standing. PMID:27184325

  11. Who Is Who: An Anomalous Predator-Prey Role Exchange between Cyprinids and Perch.

    PubMed

    Vejřík, Lukáš; Matějíčková, Ivana; Seďa, Jaromír; Blabolil, Petr; Jůza, Tomáš; Vašek, Mojmír; Ricard, Daniel; Matěna, Josef; Frouzová, Jaroslava; Kubečka, Jan; Říha, Milan; Čech, Martin

    2016-01-01

    Piscivory in cyprinids (Cyprinidae) is extremely rare. Specifically, common bream (Abramis brama) and common carp (Cyprinus carpio) are zooplanktivorous fish in deep lentic waters. Nevertheless, we observed predation by these two cyprinids under natural conditions in the Vír Reservoir, Czech Republic. We conducted diet analysis for cyprinids caught by trawling and gillnets and the large amount of young-of-the-year (YOY) perch (Perca fluviatilis), with sizes of 37-52 mm standard length, were found in their digestive tracts. In 2010, a large amount of YOY perch caused a significant decrease in Daphnia spp. size and abundance in the reservoir. Hence, a food deficit was induced for the cyprinids, apparent also from the poor nutritional condition of common bream which was much worse than the condition of those in similar reservoirs. Common carp and common bream shifted to forced piscivory, and they utilized the YOY perch as an alternative food source. In contrast, smaller species, such as roach (Rutilus rutilus) and bleak (Alburnus alburnus), widely utilized planktonic cyanobacteria. In the following year, YOY perch occurred in significantly lower numbers and conversely, Daphnia spp. size and abundance were significantly higher. The forced piscivory was not observed. Our results indicate a switch to forced piscivory by cyprinids, which was caused by a shortage of their natural food source. Moreover, this phenomenon presents an effective mechanism for reduction in the numbers of YOY perch, ensuring the stability of the ecosystem. PMID:27276078

  12. Who Is Who: An Anomalous Predator-Prey Role Exchange between Cyprinids and Perch

    PubMed Central

    Blabolil, Petr; Jůza, Tomáš; Vašek, Mojmír; Ricard, Daniel; Matěna, Josef; Frouzová, Jaroslava; Kubečka, Jan; Říha, Milan

    2016-01-01

    Piscivory in cyprinids (Cyprinidae) is extremely rare. Specifically, common bream (Abramis brama) and common carp (Cyprinus carpio) are zooplanktivorous fish in deep lentic waters. Nevertheless, we observed predation by these two cyprinids under natural conditions in the Vír Reservoir, Czech Republic. We conducted diet analysis for cyprinids caught by trawling and gillnets and the large amount of young-of-the-year (YOY) perch (Perca fluviatilis), with sizes of 37–52 mm standard length, were found in their digestive tracts. In 2010, a large amount of YOY perch caused a significant decrease in Daphnia spp. size and abundance in the reservoir. Hence, a food deficit was induced for the cyprinids, apparent also from the poor nutritional condition of common bream which was much worse than the condition of those in similar reservoirs. Common carp and common bream shifted to forced piscivory, and they utilized the YOY perch as an alternative food source. In contrast, smaller species, such as roach (Rutilus rutilus) and bleak (Alburnus alburnus), widely utilized planktonic cyanobacteria. In the following year, YOY perch occurred in significantly lower numbers and conversely, Daphnia spp. size and abundance were significantly higher. The forced piscivory was not observed. Our results indicate a switch to forced piscivory by cyprinids, which was caused by a shortage of their natural food source. Moreover, this phenomenon presents an effective mechanism for reduction in the numbers of YOY perch, ensuring the stability of the ecosystem. PMID:27276078

  13. Stimulation of Growth and Changes in the Hepatic Transcriptome by Estradiol-17-Beta in the Yellow Perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of dietary estradiol-17-beta (E2) on growth and liver transcriptomics were investigated in the yellow perch (Perca flavescens). Following a 3-month treatment, E2 significantly stimulated an increase in length and weight of juvenile male and female perch relative to controls. The increas...

  14. The effect of perches in cages during pullet rearing and egg laying on hen performance, foot health, and plumage

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Our objective was to determine if perch availability during all or part of the life cycle of caged Hy-Line W-36 chickens affected egg traits, foot health, and feather condition. Using a 2 x 2 factorial arrangement, treatment 1 represented control chickens which never had access to perches during the...

  15. Analysis of Expressed Sequence Tags from the Liver and Brain of Estrogen Treated Yellow Perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Over the last decade, there has been strong interest in the aquaculture of yellow perch (Perca flavescens) in North America. We have been developing genetically defined yellow perch broodstocks for aquaculture using genetic analyses and selection methods. However, aside from microsatellites, there...

  16. Interactions among zebra mussel shells, invertebrate prey, and Eurasian ruffe or yellow perch

    USGS Publications Warehouse

    Kolar, C.S.; Fullerton, A.H.; Martin, K.M.; Lamberti, G.A.

    2002-01-01

    The exotic zebra mussel, Dreissena polymorpha, is established in all of the Laurentian Great Lakes and may affect benthivorous fishes by increasing the complexity of benthic substrates and changing energy flow patterns within the food web. Native yellow perch, Perca flavescens, and the nonindigenous Eurasian ruffe, Gymnocephalus cernuus, are benthivores that may compete for limited food resources. As ruffe spread to areas with more dense zebra mussel populations, the zone of interaction among zebra mussels, yellow perch, and ruffe will increase and intensify. In the laboratory, the effect of zebra mussel shells on the ability of these fishes to forage on amphipods (Gammarus pseudolimnaeus) and chironomids (Chironomus plumosus) was examined in light and darkness. In 12 h, ruffe consumed more amphipods than did similar-sized yellow perch, particularly in darkness on bare cobble, and in light within zebra mussels. Amphipods decreased activity more in the presence of ruffe than yellow perch. More amphipods were found in zebra mussel shells than in bare cobble, whether or not fish were present. In darkness, when ruffe consumed more amphipods on bare cobble, amphipods became more associated with zebra mussel shells. Although ruffe consumed more amphipods than yellow perch, perch consumed more chironomids than ruffe on bare cobble. The presence of zebra mussel shells altered the relative consumption of invertebrates in some substrate-light combinations. Experiments such as these help to improve understanding of the direct and indirect effects of predation between and among native and nonindigenous species that may exert structuring forces on the nearshore communities of the Great Lakes currently or in the future.

  17. Cormorant predation and the population dynamics of walleye and yellow perch in Oneida Lake

    USGS Publications Warehouse

    Rudstam, L. G.; VanDeValk, A.J.; Adams, C.M.; Coleman, J.T.H.; Forney, J.L.; Richmond, M.E.

    2004-01-01

    Double-crested Cormorants (Phalacrocorax auritus) increased dramatically in North America during the 1990s, providing the opportunity to study the effects of an increase of a top predator on an existing predator-prey system. In Oneida Lake, New York, USA, Double-crested Cormorants were first observed nesting in 1984 and had increased to over 360 nesting pairs by 2000. Concomitant with this increase in piscivorous birds was a decrease in the adult walleye (Stizostedion vitreum) and yellow perch (Perca flavescens) populations. Analysis of a 40-yr data series shows higher mortality of subadults (age 1-2 yr perch and age 1-3 yr walleye) for both species in the 1990s compared to the previous three decades. Cormorant diet was investigated from 1995 to 2000 using a combination of cast pellets, regurgitants, and stomach analysis. Walleye and yellow perch were a major portion of the cormorant diet during these years (40-82% by number). The number of subadult walleye and yellow perch consumed by cormorants suggests that the increase in subadult mortality can be explained by predation from cormorants. Mean mortality rates of adult percids attributed to cormorant predation were 1.1% per year for walleye and 7.7% per year for yellow perch. Our analysis suggests that predation by cormorants on subadult percids is a major factor contributing to the decline in both the walleye and the yellow perch populations in Oneida Lake. Other ecosystem changes (zebra mussels, lower nutrient loading, decrease in alternate prey) are not likely explanations because the potential mechanisms involved are not consistent with auxiliary data from the lake and would not affect subadult mortality. The likely impact of bird predation on percid populations in Oneida Lake occurs because cormorants feed on larger fish that are beyond the size range where compensatory mechanisms are important.

  18. Age, growth, and production of the yellow perch, Perca flavescens (Mitchill), of Saginaw Bay

    USGS Publications Warehouse

    Hile, Ralph; Jobes, Frank W.

    1941-01-01

    Ages were determined and individual growth histories computed from the examination and measurement of scales from 820 yellow perch collected in 1929 and 1930. Calculated lengths greater than 101 millimeters were computed on the assumption (supported by empirical data) that the ratio of body length to scale length is constant. Lengths below 101 millimeters were determined with the aid of an empirical curve of the body-scale relationship of small fish. Yellow perch of age-groups III and IV (in the fourth and fifth years of life) made up the bulk of the collection (78 per cent). Females grew slightly more rapidly than males, but members of both sexes attained the legal length of 8 1/2 inches during the fourth year of life, just as they were entering on the period of most rapid growth in weight. The greatest growth in weight of both sexes occurred in the sixth year of life. In the combined samples of the two years the females exceeded the males in abundance in the ratio, 296:100. The weight of the Saginaw Bay yellow perch was found to increase as the 3.117 power of the length. The relative length of the tail decreased with increase in the length of the fish. The Saginaw Bay yellow perch is now far less abundant than it was in the early years of the fishery. The average annual production of 548,000 pounds over the period, 1917-1938, was only 28 per cent of the earlier (1891-1916) "normal" annual production of 1,961,000 pounds. A detailed analysis of statistical data available for more recent years made possible a description of annual fluctuations in the abundance and production of yellow perch and in the intensity of the yellow perch fishery in Saginaw Bay over the period, 1929-1938.

  19. First isolation of a rhabdovirus from perch Perca fluviatilis in Switzerland.

    PubMed

    Wahli, Thomas; Bellec, Laure; von Siebenthal, Beat; Cabon, Joëlle; Schmidt-Posthaus, Heike; Morin, Thierry

    2015-10-16

    Perca fluviatilis is a fish species of increasing interest to the Swiss fish farming industry. In recent years, recirculation systems have been specifically set up to increase production. In one of these farms, abnormal spiral swimming associated with elevated mortalities occurred in repeated batches of imported perch shortly after stocking on several occasions. No bacterial or parasitic etiology was detected, but a virus grown in bluegill fry (BF-2) cells was identified as perch rhabdovirus. Subsequent investigations of other samples suggested a viral tropism for the central nervous system (CNS). Phylogenetic analysis of the partial N and entire G gene sequences positioned this isolate in genogroup C of the species Perch rhabdovirus, with high nucleotide and amino acid (aa) sequence identities with the DK5533 strain isolated in Denmark in 1989. Comparative studies using other closely related isolates allowed the distinction of 2 serological patterns among perch rhabdoviruses and the identification of a proline substitution by a serine in position 147 of the glycoprotein potentially involved in antigenic differentiation. Even if perch imported onto the farm tested negative by virus isolation prior to transport, they may have been the origin of this outbreak since CNS tissue was not included in the samples that were analyzed. Another possibility might be a sub-clinical infection with a viral load in resident fish too low to be detected. This study reports the first isolation of a perch rhabdovirus in Switzerland, and emphasizes the necessity of optimizing diagnostic tools that facilitate better control of the risks associated with fish translocation. PMID:26480912

  20. Rearing without early access to perches impairs the spatial skills of laying hens.

    PubMed

    Gunnarsson; Yngvesson; Keeling; Forkman

    2000-04-01

    The effect of rearing with and without perches on the spatial ability of domestic hens (Gallus gallus domesticus) was investigated. No access or late access to perches during rearing has been shown to increase the later prevalence of floor eggs and cloacal cannibalism in loose-housed laying hens. This may be explained by either the birds reared without perches have difficulty using perches due to low muscle strength, lack of motor skills, and inability to keep balance, or they have impaired spatial skills necessary for moving around in three-dimensional space. These alternative explanations are not mutually exclusive.Thirty, day-old chicks were randomly allocated into two equal groups and reared in litter pens, one with access to perches (P+) and one without (P-). At 8 weeks of age, all birds were given access to perches, and by 15 weeks, all birds were using perches for roosting at night. At 16 weeks, 10 birds from each group were tested in pens where food was presented on a wire mesh tier 40 cm above the ground (T40). Three consecutive tests, with increasing difficulty for the bird to reach the food, were then performed. Firstly, the food was presented at 80 cm above the ground but with the tier at 40 cm still present; secondly, food was presented on the tier at 80 cm; and then, finally, with the food on a 160 cm high tier with the tier at 80 cm still present. All birds were food deprived for 15 h before each test and the time from the bird entering the pen until reaching the food was recorded. There was no difference in the time to reach the food between P+ and P- birds in the T40 test. But as the difficulty of the task increased, the difference between the P+ and P- birds became significant, with the P- birds taking a longer time to reach the food or not reaching it at all. Since there was no difference between P+ and P- in the T40 test, it seems reasonable to suppose that the later differences did not depend on differences in physical ability. Therefore, the

  1. Microsatellite Analysis of Perch (Perca fluviatilis) and its Genetic Authentication of Geographical Localization.

    PubMed

    Rolli, Joelle; Girardet, Sylvie; Monachon, Cédric; Richard, Christian

    2014-10-01

    European perch (Perca fluviatilis) is an economically important freshwater species in Europe. In Switzerland, where the demand largely exceeds the production coming from Swiss lakes, nearly 90% of the requirements come from importation with the majority of perch originating from Estonia and Russia. The price of perch fillet varies considerably depending on the origin. Therefore traceability in the fish food sector plays an increasingly important role for consumer protection. Currently the traceability of perch can be assessed through chemical isotopic analysis. The 180/160 isotopic abundance ratio is used as geographical traceability marker, but several aspects affect the accuracy of the method, i.e. the distinct geographical area ratio differs only very slightly with overlapping standard deviation, the need for a large amount of fish material requires the mix of many fillets, the impossibility of analyzing processed matrix, the comparison of the ratio with the ratio of a sample of the presumed originating water makes the analyses more complicated. New application of DNA markers for the traceability of food products plays an increasingly important role for consumer protection. Microsatellites, which are short tandemly repetitive DNA sequences, are genetic markers of choice for traceability because of their abundance and high polymorphism. Moreover, fluorescent labelling and capillary electrophoresis separation increase efficiency and precision of genotyping microsatellites. The method can also be efficiently applied in processed food products where other methods have limited applications. In this study, we tested the efficiency of three polymorphic microsatellites and their combinations for their ability to correctly assign or exclude 195 reference perch to their origin population. Using the maximum likelihood and Bayesian methods computed by the software GeneClass2, the three loci microsatellite were optimized and allowed the correct assignation of all but two

  2. The Effects of Zebra Mussels (Dreissena polymorpha) on the Foraging Success of Eurasian Perch (Perca fluviatilis) and Ruffe (Gymnocephalus cernuus)

    NASA Astrophysics Data System (ADS)

    Dieterich, Axel; Mörtl, Martin; Eckmann, Reiner

    2004-07-01

    Complex habitat structures can influence the foraging success of fish. Competition for food between fish species can therefore depend on the competitors' abilities to cope with structural complexity. In laboratory experiments, we comparatively assessed effects of zebra mussels (Dreissena polymorpha Pall.) on the foraging success of Eurasian perch (Perca fluviatilis L.) and ruffe (Gymnocephalus cernuus (L.)). In single-species and mixed-species experiments, the fish were fed caddisfly larvae (Tinodes waeneri (L.)) over complex (mussel-covered stones) and less-complex (bare stones) substrates. With intraspecific competition, food consumption by perch and ruffe decreased significantly when the complex substrate was used. With interspecific competition, food consumption by perch and ruffe did not change with substrate complexity, but perch clearly out-competed ruffe on both substrates. Zebra mussel beds provide a refuge for macrozoobenthos against predation by ruffe and probably also by perch. (

  3. Effect of Feeding-Fasting Cycles on Oxygen Consumption and Bioenergetics of Yellow Perch

    USGS Publications Warehouse

    Chipps, Steven R.; Travis W. Schaeffer; Daniel E. Spengler; Casey W. Schoenebeck; Michael L. Brown

    2012-01-01

    We measured growth and oxygen consumption of age-1 yellow perch Perca flavescenssubjected to ad libitum (control) or variable feeding cycles of 2 (i.e., 2 d of feed, 2 d of deprivation), 6, or 12 d for a 72-d period. Individual, female yellow perch (initial weight = 51.9 ± 0.9 g [mean ± SE]) were stocked in 110-L aquaria to provide six replicates per treatment and fed measured rations of live fathead minnow Pimephales promelas. Consumption, absolute growth rate, growth efficiency, and oxygen consumption were similar among feeding regimens. However, growth trajectories for fish on the 2-d cycle were significantly lower than other feed–fast cycles. Hyperphagia occurred in all treatments. Bioenergetics model simulations indicated that consumption was significantly underestimated (t = 5.4, df = 4, P = 0.006), while growth was overestimated (t = −5.5, df = 4, P = 0.005) for fish on the 12-d cycle. However, model errors detected between observed and predicted values were low, ranging from −10.1% to +7.8%. We found that juvenile yellow perch exhibited compensatory growth (CG), but none of the feed–fast treatments resulted in growth overcompensation. Likewise, we found no evidence that respiration rates varied with CG, implying that yellow perch bioenergetics models could be used to predict the effects of feeding history and CG response on food consumption and fish growth.

  4. The effect of perches installed in conventional cages on White Leghorn pullets

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Enrichments for laying cages are receiving increasing attention by egg producers as a means of meeting the behavioral needs of laying hens. Pullet cage enrichments have received less attention and study. Adapting pullets to perches prior to placement in enriched laying cages may offer health and wel...

  5. Cooled perch effects on performance and well-being traits in caged White Leghorn hens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We assessed the effects of chilled water cooling perches on hen performance, feather condition, foot health, and physiological and behavioral parameters during the 2013 summer with a 4-h acute heating episode. White Leghorn pullets at 16 wk of age were randomly assigned to 18 cages arranged into 3 b...

  6. A note on the effects of perches and litter substrate on leg weakness in broiler chickens.

    PubMed

    Su, G; Sørensen, P; Kestin, S C

    2000-09-01

    Two trials were conducted to investigate the effect of availability of perches on indices of leg weakness in broiler chickens. A third trial investigated the effect of litter substrate on similar indices of leg weakness in broiler chickens. Leg weakness traits examined were walking ability and tibial dyschondroplasia, tibial curvature, foot burn, and hock burn. Body weight was also measured in all trials. The presence of perches in the rearing pens had no effect on any of the indices of leg weakness examined in either trial. There were no consistent effects of perches on BW. Litter substrate significantly affected some indices of leg weakness; birds reared on wheat straw had poorer walking ability and more foot burn than birds reared on wood shavings, and birds reared on hemp waste were intermediate between them. There was no effect of litter substrate on tibial dyschondroplasia or tibial curvature. Turning the straw litter regularly and adding fresh supplies when necessary did not significantly improve indices of leg weakness. It was concluded that wood shavings provide a better litter substrate than straw, but that perches have no beneficial effect on reducing leg weakness in broilers. PMID:11020069

  7. Movements of yellow perch marked in southern Green Bay, Lake Michigan, in 1950

    USGS Publications Warehouse

    Mraz, Donald

    1952-01-01

    These investigations have demonstrated that for studying migration of yellow perch, tagging is superior to fin-clipping as a method of marking. The technique of the tagging, however, needs to be improved, and better means must be found to trace tagged

  8. Identification and virulence of Chryseobacterium indologenes isolated from diseased yellow perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fifteen Gram-negative bacteria isolates were recovered from the skin lesions of diseased yellow perch (Perca flavescens). Based on API 20NE test results, ten isolates were found to share 67.2% to 99.9% homologies with Chryseobactertium indologenes. Based on results of fatty acid methyl ester analys...

  9. Recruitment synchrony of yellow perch (Perca flavescens, Percidae) in the Great Lakes region, 1966–2008

    USGS Publications Warehouse

    Honsey, Andrew E.; Bunnell, David; Troy, Cary D.; Fielder, David G.; Thomas, Michael V.; Knight, Carey T.; Chong, Stephen; Hook, Tomas O.

    2016-01-01

    Population-level reproductive success (recruitment) of many fish populations is characterized by high inter-annual variation and related to annual variation in key environmental factors (e.g., climate). When such environmental factors are annually correlated across broad spatial scales, spatially separated populations may display recruitment synchrony (i.e., the Moran effect). We investigated inter-annual (1966–2008) variation in yellow perch (Perca flavescens, Percidae) recruitment using 16 datasets describing populations located in four of the five Laurentian Great Lakes (Erie, Huron, Michigan, and Ontario) and Lake St. Clair. We indexed relative year class strength using catch-curve residuals for each year-class across 2–4 years and compared relative year-class strength among sampling locations. Results indicate that perch recruitment is positively synchronized across the region. In addition, the spatial scale of this synchrony appears to be broader than previous estimates for both yellow perch and freshwater fish in general. To investigate potential factors influencing relative year-class strength, we related year-class strength to regional indices of annual climatic conditions (spring-summer air temperature, winter air temperature, and spring precipitation) using data from 14 weather stations across the Great Lakes region. We found that mean spring-summer temperature is significantly positively related to recruitment success among Great Lakes yellow perch populations.

  10. Production of genetically defined perch broodstocks and their selection for fast growth

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The restrictions and closures of commercial freshwater fisheries in North America, coupled with continued high consumer demand, have fueled interest in yellow perch aquaculture. However, the general slow growth of this species and the lack of commercially available genetically improved broodstocks h...

  11. Myxobolus neurophilus: a common myxosporidian parasite infecting yellow perch Perca flavacens (Mitchell) in Saskatchewan, Canada

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The goal of this study was to identify a myxosporidian parasite infecting the central nervous system of yellow perch Perca flavacens (Mitchell) observed while investigating a fish kill in Saskatchewan, Canada. Fish were collected from seven different lakes, from 2 distinct watersheds. Sixty-four p...

  12. Yellow perch nutrient utilization and performance fed grower diet formulations with fermented soybean concentrate

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Feeds formulated with fermented soybean concentrate (FSBC) were processed using a pilot-scale Wenger twin screw extruder, using a 1.9 cm diameter circular die, and then fed to juvenile yellow perch (Perca flavescens) (~26g) as a protein replacer for fish meal protein. Four fish-meal replacement lev...

  13. Developmental expression and estrogen responses of endocrine genes in juvenile yellow perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The present study examines the expression of growth-regulating genes (gh, prl, smtl and igf1b), the estrogen receptors (esr1 and esr2a) and aromatase (cyp19a1a) in developing yellow perch. To gain an initial understanding into the endocrine control of growth preceding and involved with sexual size d...

  14. Perched-Water Evaluation for the Deep Vadose Zone Beneath the B, BX, and BY Tank Farms Area of the Hanford Site

    SciTech Connect

    Truex, Michael J.; Oostrom, Martinus; Carroll, KC; Chronister, Glen B.

    2013-06-28

    Perched-water conditions have been observed in the vadose zone above a fine-grained zone that is located a few meters above the water table within the B, BX, and BY Tank Farms area. The perched water contains elevated concentrations of uranium and technetium-99. This perched-water zone is important to consider in evaluating the future flux of contaminated water into the groundwater. The study described in this report was conducted to examine the perched-water conditions and quantitatively evaluate 1) factors that control perching behavior, 2) contaminant flux toward groundwater, and 3) associated groundwater impact.

  15. Fyke-net and gill-net size selectivities for yellow perch in Green Bay, Lake Michigan

    USGS Publications Warehouse

    Kraft, J.A.; Johnson, B.L.

    1992-01-01

    We estimated a fyke-net selectivity function for yellow perch Perca flavescens in Green Bay, Lake Michigan, by comparing length-frequency distributions of yellow perch captured in fyke nets with different mesh sizes in 1986. Using a length--girth relationship for Green Bay yellow perch, we expressed selectivity as the ratio of girth (G) to effective mesh perimeter (P), which was 5a??7% less than nominal mesh perimeter. Then, fitting an existing gill-net selectivity function to the Green Bay yellow perch fishery, we found fyke-net and gill-net selectivities were similar, with similar G /P ratios, but fyke nets had smaller effective mesh perimeters and thus were more efficient at capturing smaller yellow perch for any given mesh size, The derived fyke-net selectivity function can be used to determine mesh sizes that minimize the sublegal catch of yellow perch in this fishery and could be applied to entrapment gear in other yellow perch fisheries, given data on the lengtha??girth relationships and effective mesh perimeters.

  16. Short-Term Fidelity, Habitat Use and Vertical Movement Behavior of the Black Rockfish Sebastes schlegelii as Determined by Acoustic Telemetry.

    PubMed

    Zhang, Yingqiu; Xu, Qiang; Alós, Josep; Liu, Hui; Xu, Qinzeng; Yang, Hongsheng

    2015-01-01

    The recent miniaturization of acoustic tracking devices has allowed fishery managers and scientists to collect spatial and temporal data for sustainable fishery management. The spatial and temporal dimensions of fish behavior (movement and/or vertical migrations) are particularly relevant for rockfishes (Sebastes spp.) because most rockfish species are long-lived and have high site fidelity, increasing their vulnerability to overexploitation. In this study, we describe the short-term (with a tracking period of up to 46 d) spatial behavior, as determined by acoustic tracking, of the black rockfish Sebastes schlegelii, a species subject to overexploitation in the Yellow Sea of China. The average residence index (the ratio of detected days to the total period from release to the last detection) in the study area was 0.92 ± 0.13, and most of the tagged fish were detected by only one region of the acoustic receiver array, suggesting relatively high site fidelity to the study area. Acoustic tracking also suggested that this species is more frequently detected during the day than at night in our study area. However, the diel detection periodicity (24 h) was only evident for certain periods of the tracking time, as revealed by a continuous wavelet transform. The habitat selection index of tagged S. schlegelii suggested that S. schlegelii preferred natural reefs, mixed sand/artificial reef bottoms and mixed bottoms of boulder, cobble, gravel and artificial reefs. The preference of this species for the artificial reefs that were recently deployed in the study area suggests that artificial seascapes may be effective management tools to attract individuals. The vertical movement of tagged S. schlegelii was mostly characterized by bottom dwelling behavior, and there was high individual variability in the vertical migration pattern. Our results have important implications for S. schlegelii catchability, the implementation of marine protected areas, and the identification of key

  17. Short-Term Fidelity, Habitat Use and Vertical Movement Behavior of the Black Rockfish Sebastes schlegelii as Determined by Acoustic Telemetry

    PubMed Central

    Zhang, Yingqiu; Xu, Qiang; Alós, Josep; Liu, Hui; Xu, Qinzeng; Yang, Hongsheng

    2015-01-01

    The recent miniaturization of acoustic tracking devices has allowed fishery managers and scientists to collect spatial and temporal data for sustainable fishery management. The spatial and temporal dimensions of fish behavior (movement and/or vertical migrations) are particularly relevant for rockfishes (Sebastes spp.) because most rockfish species are long-lived and have high site fidelity, increasing their vulnerability to overexploitation. In this study, we describe the short-term (with a tracking period of up to 46 d) spatial behavior, as determined by acoustic tracking, of the black rockfish Sebastes schlegelii, a species subject to overexploitation in the Yellow Sea of China. The average residence index (the ratio of detected days to the total period from release to the last detection) in the study area was 0.92 ± 0.13, and most of the tagged fish were detected by only one region of the acoustic receiver array, suggesting relatively high site fidelity to the study area. Acoustic tracking also suggested that this species is more frequently detected during the day than at night in our study area. However, the diel detection periodicity (24 h) was only evident for certain periods of the tracking time, as revealed by a continuous wavelet transform. The habitat selection index of tagged S. schlegelii suggested that S. schlegelii preferred natural reefs, mixed sand/artificial reef bottoms and mixed bottoms of boulder, cobble, gravel and artificial reefs. The preference of this species for the artificial reefs that were recently deployed in the study area suggests that artificial seascapes may be effective management tools to attract individuals. The vertical movement of tagged S. schlegelii was mostly characterized by bottom dwelling behavior, and there was high individual variability in the vertical migration pattern. Our results have important implications for S. schlegelii catchability, the implementation of marine protected areas, and the identification of key

  18. Metals in Nile perch (Lates niloticus) and suspended particulate matter from Lake Victoria, Tanzania.

    PubMed

    Machiwa, John F

    2005-01-01

    A study was conducted to assess the levels of pollutant metals in suspended particulate matter and Nile perch from Lake Victoria. The metals in particulate matter were determined to ascertain their concentrations at the base of the food chain. Nile perch samples were collected in September 2003 from five major fish processing factories at the shores of Lake Victoria in Mwanza and Musoma. The concentrations of total Hg, Pb, Cd, and Cu were generally low in particulate matter and in most locations were close to or below their limits of detection. The concentrations of Zn were high in suspended particulate matter, the highest being 219.4 +/- 153.0 microg L(-1) found in particulate matter from Nungwe Bay in the southern part of Lake Victoria. Nile perch generally contained low levels of heavy metals; the range for Pb was <0.01-0.08 microg g(-1) ww, Cd was <0.001-0.04 microg g(-1) ww, Cu was 0.01-0.97 microg g(-1) ww, and Zn was <0.01-18.94 microg g(-1) ww. The concentration of total mercury ranged between 31.0 and 684.2 ng g(-1) ww; generally, it was below the Food and Agriculture Organization of the United Nations/World Health Organization (1000 ng total Hg g(-1) ww for piscivorous fish species) maximum allowable level. Indeed, all Nile perch samples that weighed less than 10 kg had less than 200 ng total Hg g(-1) ww and therefore are safe for regular consumption by at-risk groups such as children and pregnant women. Levels of mercury and other heavy metals in Nile perch at present is, therefore, not a severe environmental issue; however, urgent regulatory measures should be taken to minimize metal input into the lake to maintain the current levels in the fish. PMID:16134370

  19. Lake Erie Yellow perch age estimation based on three structures: Precision, processing times, and management implications

    USGS Publications Warehouse

    Vandergoot, C.S.; Bur, M.T.; Powell, K.A.

    2008-01-01

    Yellow perch Perca flavescens support economically important recreational and commercial fisheries in Lake Erie and are intensively managed. Age estimation represents an integral component in the management of Lake Erie yellow perch stocks, as age-structured population models are used to set safe harvest levels on an annual basis. We compared the precision associated with yellow perch (N = 251) age estimates from scales, sagittal otoliths, and anal spine sections and evaluated the time required to process and estimate age from each structure. Three readers of varying experience estimated ages. The precision (mean coefficient of variation) of estimates among readers was 1% for sagittal otoliths, 5-6% for anal spines, and 11-13% for scales. Agreement rates among readers were 94-95% for otoliths, 71-76% for anal spines, and 45-50% for scales. Systematic age estimation differences were evident among scale and anal spine readers; less-experienced readers tended to underestimate ages of yellow perch older than age 4 relative to estimates made by an experienced reader. Mean scale age tended to underestimate ages of age-6 and older fish relative to otolith ages estimated by an experienced reader. Total annual mortality estimates based on scale ages were 20% higher than those based on otolith ages; mortality estimates based on anal spine ages were 4% higher than those based on otolith ages. Otoliths required more removal and preparation time than scales and anal spines, but age estimation time was substantially lower for otoliths than for the other two structures. We suggest the use of otoliths or anal spines for age estimation in yellow perch (regardless of length) from Lake Erie and other systems where precise age estimates are necessary, because age estimation errors resulting from the use of scales could generate incorrect management decisions. ?? Copyright by the American Fisheries Society 2008.

  20. Impingement losses of white perch at Hudson River power plants: magnitude and biological significance

    SciTech Connect

    Barnthouse, L.W.; Van Winkle, W.; Vaughan, D.S.

    1983-01-01

    A quantitative assessment of the impact of impingement at power plants on the Hudson River white perch population was made. It was estimated that impingement reduces the abundance of each white perch year class by at least 10% and probably by 15-20% or more after 2-3 years of vulnerability to power plants. Effects of impingement on average year-class abundance of white perch could not be detected from a time series of abundance indices derived from impingement data. Even if a reliable index were developed, natural fluctuations in year-class strength are great enough that a short-term monitoring program would be inadequate for detecting even a large reduction in average year-class strength. A multipopulation analysis was performed using simple food chain and food web models. The results suggest that any long-term decline in white perch abundance caused by impingement should be accompanied by an increase in the biomass of adult white perch relative to young-of-the-year. It was concluded that (1) at present, assessments of population-level impact of impingement should focus on short-term effects, (2) research is needed to develop a reliable index of year-class strength for use in long-term monitoring programs, (3) identification and quantification of natural environmental factors influencing year-class strength are needed to improve the ability to predict and detect changes in abundance, and (4) it would be useful in designing monitoring programs to focus on detecting patterns of change among populations and age groups rather than solely on declines in abundance of individual populations. 24 references, 5 figures, 3 tables.

  1. The application of stereo-video technology for the assessment on population change of black rockfish Sebastes schlegeli in a vessel reef area in Haizhou Bay, China

    NASA Astrophysics Data System (ADS)

    Liu, Hui; Xu, Qiang; Xu, Qinzeng; Zhang, Yingqiu; Yang, Hongsheng

    2015-01-01

    The assessment of population structure and abundance of fish assemblages associated with artificial reefs (ARs) is an important aspect of AR management. In the present study, we used a Dive-Operated Stereo Video (stereo-DOV) technique to assess the population structure and abundance of Sebastes schlegeli associated with two metallic, and three wooden, vessel reefs in Haizhou Bay during 2012 and 2013. The study used video systems to obtain length measurements and estimates of abundance. The size composition of S. schlegeli differed among reefs and individuals around vessel reefs were all adults, with total lengths (TL) of >20 cm. Juvenile fish were encountered by divers in a rocky area near the island away from the vessel reefs. The largest individual S. schlegeli (with the highest TL) among five reefs were found around a metallic vessel reef in both 2012 and 2013. TL of S. s chlegeli from all reefs increased by an average of 3.2 cm ( P<0.05) from 2012 to 2013, with an estimated mean weight increase of 250.4 g ( P<0.05). The video survey also indicated a decrease in the biomass of schools near two metallic vessels between the years. Stereo-video technology was found to be suitable for rockfish surveys around the reefs.

  2. Prevalence and spatial distribution of intraerythrocytic parasite(s) in Puget Sound rockfish (Sebastes emphaeus) from the San Juan Archipelago, Washington (USA)

    USGS Publications Warehouse

    Van Der Straaten, N.; Jacobson, A.; Halos, D.; Hershberger, P.; Kocan, A.A.; Kocan, R.

    2005-01-01

    Two morphologically distinct forms of an intraerythrocytic parasite(s) were detected by microscopic observation of Giemsa-stained blood films in 45.7% of 119 rockfish (Sebastes emphaeus) from the San Juan Archipelago (Washington State, U.S.A.). Infection prevalence for both forms was 53% in males, 44% in females, and 33% in fish of undetermined gender. A binucleate "ring-stage" was present at all 4 geographic sites, with a mean prevalence of 45.7%, while mean prevalence of a larger gamont-like form from the same sites was 5.1%. The relationship of the 2 forms to each other could not be determined. Neither schizogony nor binary fission was evident in any of the infected erythrocytes and the parasites contained no obvious pigment. The possibility of the 2 morphologic forms being 2 distinct species is supported by the observation that no difference in parasitemia was seen in the binucleate form among sites (1.6-1.9%), while parasitemia of the gamont-like form varied significantly among sites, ranging from a high of 4% to a low of 0.1%. Taxonomic status of either form could not be determined at this time based on limited existing morphologic data. ?? American Society of Parasitologists 2005.

  3. The role of melano-macrophage aggregates in the storage of mercury and other metals: an example from yelloweye rockfish (Sebastes ruberrimus).

    PubMed

    Barst, Benjamin D; Bridges, Kristin; Korbas, Malgorzata; Roberts, Aaron P; Van Kirk, Kray; McNeel, Kevin; Drevnick, Paul E

    2015-08-01

    Melano-macrophage aggregates, collections of specialized cells of the innate immune system of fish, are considered a general biomarker for contaminant toxicity. To elucidate further the relationship between macrophage aggregates and metals exposure, yelloweye rockfish (Sebastes ruberrimus), a long-lived species, were sampled from the east and west coasts of Prince of Wales Island, Alaska. Metals concentrations in livers (inorganic Hg, methyl mercury, Se, Ni, Cd, Cu, Zn) and spleens (inorganic Hg and methyl mercury) were determined, as well as their correlations with melano-macrophage aggregate area. Sections of liver tissue were analyzed by laser ablation-inductively coupled plasma-mass spectrometry to determine how metals were spatially distributed between hepatocytes and macrophage aggregates. The concentration of inorganic Hg in whole tissue was the best predictor of macrophage area in yelloweye livers and spleens. Macrophage aggregates had higher relative concentrations than most metals compared with the surrounding hepatocytes. However, not all metals were accumulated to the same degree, as evidenced by differences in the ratios of metals in macrophages compared with hepatocytes. Laser ablation data were corroborated with the results of X-ray synchrotron fluorescence imaging of a yelloweye liver section. Hepatic macrophage aggregates in yelloweye rockfish may play an important role in the detoxification and storage of Hg and other metals. PMID:26177920

  4. Parasites as Biological Tags for Stock Discrimination of Beaked Redfish (Sebastes mentella): Parasite Infra-Communities vs. Limited Resolution of Cytochrome Markers.

    PubMed

    Klapper, Regina; Kochmann, Judith; O'Hara, Robert B; Karl, Horst; Kuhn, Thomas

    2016-01-01

    The use of parasites as biological tags for discrimination of fish stocks has become a commonly used approach in fisheries management. Metazoan parasite community analysis and anisakid nematode population genetics based on a mitochondrial cytochrome marker were applied in order to assess the usefulness of the two parasitological methods for stock discrimination of beaked redfish Sebastes mentella of three fishing grounds in the North East Atlantic. Multivariate, model-based approaches demonstrated that the metazoan parasite fauna of beaked redfish from East Greenland differed from Tampen, northern North Sea, and Bear Island, Barents Sea. A joint model (latent variable model) was used to estimate the effects of covariates on parasite species and identified four parasite species as main source of differences among fishing grounds; namely Chondracanthus nodosus, Anisakis simplex s.s., Hysterothylacium aduncum, and Bothriocephalus scorpii. Due to its high abundance and differences between fishing grounds, Anisakis simplex s.s. was considered as a major biological tag for host stock differentiation. Whilst the sole examination of Anisakis simplex s.s. on a population genetic level is only of limited use, anisakid nematodes (in particular, A. simplex s.s.) can serve as biological tags on a parasite community level. This study confirmed the use of multivariate analyses as a tool to evaluate parasite infra-communities and to identify parasite species that might serve as biological tags. The present study suggests that S. mentella in the northern North Sea and Barents Sea is not sub-structured. PMID:27104735

  5. Parasites as Biological Tags for Stock Discrimination of Beaked Redfish (Sebastes mentella): Parasite Infra-Communities vs. Limited Resolution of Cytochrome Markers

    PubMed Central

    Klapper, Regina; Kochmann, Judith; O’Hara, Robert B.; Karl, Horst; Kuhn, Thomas

    2016-01-01

    The use of parasites as biological tags for discrimination of fish stocks has become a commonly used approach in fisheries management. Metazoan parasite community analysis and anisakid nematode population genetics based on a mitochondrial cytochrome marker were applied in order to assess the usefulness of the two parasitological methods for stock discrimination of beaked redfish Sebastes mentella of three fishing grounds in the North East Atlantic. Multivariate, model-based approaches demonstrated that the metazoan parasite fauna of beaked redfish from East Greenland differed from Tampen, northern North Sea, and Bear Island, Barents Sea. A joint model (latent variable model) was used to estimate the effects of covariates on parasite species and identified four parasite species as main source of differences among fishing grounds; namely Chondracanthus nodosus, Anisakis simplex s.s., Hysterothylacium aduncum, and Bothriocephalus scorpii. Due to its high abundance and differences between fishing grounds, Anisakis simplex s.s. was considered as a major biological tag for host stock differentiation. Whilst the sole examination of Anisakis simplex s.s. on a population genetic level is only of limited use, anisakid nematodes (in particular, A. simplex s.s.) can serve as biological tags on a parasite community level. This study confirmed the use of multivariate analyses as a tool to evaluate parasite infra-communities and to identify parasite species that might serve as biological tags. The present study suggests that S. mentella in the northern North Sea and Barents Sea is not sub-structured. PMID:27104735

  6. Evaluation of rockfish conservation area networks in the United States and Canada relative to the dispersal distance for black rockfish (Sebastes melanops)

    PubMed Central

    Lotterhos, Katie E; Dick, Stefan J; Haggarty, Dana R

    2014-01-01

    Marine reserves networks are implemented as a way to mitigate the impact of fishing on marine ecosystems. Theory suggests that a reserve network will function synergistically when connected by dispersal, but the scale of dispersal is often unknown. On the Pacific coast of the United States and Canada, both countries have recently implemented a number of rockfish conservation areas (RCAs) to protect exploited rockfish species, but no study has evaluated the connectivity within networks in each country or between the two countries. We used isolation-by-distance theory to estimate the scale of dispersal from microsatellite data in the black rockfish, Sebastes melanops, and compared this estimate with the distance between RCAs that would protect this species. Within each country, we found that the distance between RCAs was generally within the confidence intervals of mean dispersal per generation. The distance between these two RCA networks, however, was greater than the average dispersal per generation. The data were also consistent with a genetic break between southern Oregon and central Oregon. We discuss whether additional nearshore RCAs in southern Oregon and Washington would help promote connectivity between RCA's for shallow-water rockfishes. PMID:24567745

  7. Ecohydrology of Wetlands Occurring on Perched Seasonally Saturated Water Tables in the Central Valley of California

    NASA Astrophysics Data System (ADS)

    McCarten, N. F.; Harter, T.

    2010-12-01

    The Central Valley, California has extensive areas of shallow perched groundwater systems associated with geomorphic terraces. Early season water supply is derived from precipitation (PPT) that has infiltrated into soils underlain by a near surface aquitard, typically at less than 2 m depth. Early season water input is regulated by the hydraulic conductivity of the (clay-) loamy soils and by surface and aquitard slope of the local catchments associated with these old alluvial landforms. Research on these landforms and shallow aquifers has identified a complex PPT and evapotranspiration (ET) sensitive system that includes shallow depressions that seasonally produce water table derived wetlands (“vernal pools”). These wetlands have been recognized for a very high level of plant and invertebrate species diversity including endangered species. Our work on these seasonal perched systems shows that as much as 80 percent of the soil column above the aquitard is saturated, during average to high rainfall years, for up to 90 to 120 days. Soil surface topographic depressions reduce the soil depth to the aquitard. Where the water table of this perched system intercepts the land surface, vernal pools develop. The perched groundwater drains into seasonal surface drainages that ultimately supply the Sacramento and San Joaquin rivers. At the end of the rainy season, both the vernal pools and the perched aquifer rapidly and synchronously disappear. Once the soil is unsaturated, water flow is vertically upward due to ET. Aquatic and wetland adapted plant species develop within the basins along a depth gradient. Variably saturated modeling of this system was conducted using HYDRUS 2D/3D. Climate inputs were from local and regional weather stations that measure and calculate daily PPT and ET, respectively. Initial conditions and calibration of the domain were based on field measurements using pressure transducers and soil moisture sensors. Soil pressure flux was measured using a

  8. Development of Genetically Defined Yellow Perch (Perca flavescens) Broodstocks: Results of Performance Trial on F1 Generations

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We have begun a selection program for the improvement of yellow perch (Perca flavescens) aquaculture involving the development of genetically defined broodstocks. To initiate the program, 16 wild North American populations were analyzed using published and newly developed microsatellites (Grzybowski...

  9. Endocrine disruption and altered gonadal development in white perch (Morone americana) from the lower Great Lakes region.

    PubMed Central

    Kavanagh, Richard J; Balch, Gordon C; Kiparissis, Yiannis; Niimi, Arthur J; Sherry, Jim; Tinson, Cheryl; Metcalfe, Chris D

    2004-01-01

    High prevalences of gonadal intersex have been observed in wild fish populations in areas affected by domestic and industrial effluents. For this study, fish were collected in 1998 from the Cootes Paradise region of Hamilton Harbour in western Lake Ontario, Canada, to determine whether gonadal abnormalities, including intersex, were present in young of the year (YOY) fish. No gonadal abnormalities were observed in goldfish (Carassius auratus), common carp (Cyprinus carpio), gizzard shad (Dorosoma cepedianum), brown bullhead (Ictalurus ameiurus), pumpkinseed (Lepomis gibbosus), and bluegill (Lepomis macrochirus). However, intersex gonads were observed in 8 of 16 male white perch (Morone americana) examined in this survey. Subsequently, in 1999 and 2000 white perch estimated to be YOY to approximately 2 years of age were collected from Cootes Paradise and from two other sites in the lower Great Lakes region. Gonadal intersex was observed in male white perch collected from the Bay of Quinte (22-44%) and Lake St. Clair (45%), although the prevalence and the extent of the intersex condition were lower relative to the 83% prevalence in white perch collected in Cootes Paradise. Intersex was not observed in hatchery-reared white perch or in white perch collected from an uncontaminated reference site (i.e., Deal Lake) in the United States. An analysis of plasma collected in the spring of 2002 from male adult white perch in Cootes Paradise revealed high concentrations of vitellogenin, ranging from 49 to 1,711 microg/mL. These observations indicate that male white perch are exposed to estrogenic endocrine-disrupting substances that may be responsible for the induction of gonadal intersex. PMID:15175179

  10. Of Paleo-Genes and Perch: What if an “Alien” Is Actually a Native?

    PubMed Central

    Stager, J. Curt; Sporn, Lee Ann; Johnson, Melanie; Regalado, Sean

    2015-01-01

    Documenting whether a biotic taxon is native or alien to an ecosystem has theoretical value for ecological and evolutionary studies, and has practical value because it can potentially identify a taxon as a desirable component of an ecosystem or target it for removal. In some cases, however, such background information is inadequate or unavailable. Here we use paleo-DNA to re-evaluate the historical status of yellow perch in the 6 million acre Adirondack State Park of northern New York. Yellow perch DNA in a 2200-year sediment record reveals a long-term native status for these supposedly alien fish and challenges assumptions that they necessarily exclude native trout from upland lakes. Similar approaches could be applied to other species with uncertain historical distributions and could help to identify unrecognized pockets of biodiversity. PMID:25751263

  11. Retention of mercury in the muscle of yellow perch (Perca flavescens) and rock bass (Ambloplites rupestris)

    USGS Publications Warehouse

    Laarman, Percy W.; Willford, Wayne A.; Olson, James R.

    1976-01-01

    Mercury-contaminated yellow perch (Perca flavescens) and rock bass (Ambloplites rupestris) were collected from Lake St. Clair and stocked in two earthen ponds in September 1970. Twenty-six months later, concentrations of total mercury in the fillets had declined 53% in the yellow perch and 59% in the rock bass; however, the mean weight of the fish increased 88 and 183%, respectively, during the same period. All of the reduction in mercury concentrations was attributable to dilution by growth. Slight discrepancies between the theoretical and observed reduction of mercury concentrations suggest an initial redistribution of residues from other tissues to the muscle and a continued incorporation of background amounts of mercury during growth.

  12. Effects of habitat on mercury concentrations in fish: a case study of Nile perch (Lates niloticus) in Lake Nabugabo, Uganda.

    PubMed

    Hanna, D E L; Buck, D G; Chapman, L J

    2016-01-01

    This study focused on variation in fish mercury (Hg) concentrations in 185 Nile perch (Lates niloticus) samples collected across four different habitat types in Lake Nabugabo, Uganda, a tropical lake located proximate to Lake Victoria. We quantified the stomach contents of Nile perch using the % index of relative importance, as well as, nitrogen and carbon isotopic concentrations to assess the role of diet and trophic level on Hg concentrations. In each habitat, we also evaluated a suite of chemical and physical characteristics that are commonly associated with variation in Hg bioavailability in temperate systems. Using linear mixed models and ANOVA, we demonstrate that habitat of capture is an important predictor of Hg concentrations in Nile perch from Lake Nabugabo and that the relationship between habitat and Hg is size and diet dependent. Nile perch diet as well as dissolved oxygen concentration and pH were also correlated with observed differences in fish Hg. Overall, Hg concentrations in Nile perch were all well below the WHO/FAO recommended guideline of 500 ng/g (mean 13.6 ± 0.4 ng/g wet weight; range 4.9 and 29.3 ng/g wet weight). This work contributes to a growing awareness of intra-lake divergence in Nile perch, as well as, divergence in Hg concentrations between varying aquatic habitat types, particularly wetlands. PMID:26520435

  13. Modeling power-plant impacts on multipopulation systems: application of loop analysis to the Hudson River white perch population

    SciTech Connect

    Barnthouse, L.W.

    1981-12-01

    The white perch population of the Hudson River suffers unusually high mortality due to impingement and entrainment at power plants. The long-term consequences of this mortality for the Hudson River ecosystem depend in part on interactions between the white perch population and its prey, competitors, and predators, many of which are themselves subject to mortality at power plants. Size multipopulation models were analyzed, using a technique known as loop analysis, to determine how patterns of interaction affect population responses to stress and to identify the parameters that have the greatest influence on those responses. These theoretical results, together with information on life history and vulnerability to power plants for Hudson River fish and macroinvertebrate populations, were used to assess the likely effects of power plant mortality on the white perch population and its prey, competitors, and predators. The results suggest that effects of interactions with other populations are insufficient to offset the effects of entrainment and impingement on the Hudson River white perch population. The results also suggest that if mortality imposed by power plants does cause a substantial decline in the white perch population, then piscivore populations in the Hudson River should not be noticeably affected, a complementary increase in the abundance of competitors that are relatively invulnerable to power plants should occur, and a shift in the distribution of biomass within the white perch population toward the older age classes should occur.

  14. Dermal melanin concentration of yellow perch Perca flavescens in relation to water transparency.

    PubMed

    Rheault, G; Langevin, M; Cabana, G; Glémet, H

    2015-11-01

    A positive relationship was observed between Secchi disc depth and dermal melanin concentration in yellow perch Perca flavescens sampled from 11 humic lakes located on the Canadian Shield in southern Quebec (Canada). Secchi disc depth explained 23% of the variations of dermal melanin concentration. Secchi disc depth and thus water transparency appear to have a positive influence on melanin production in the dermis of P. flavescens. PMID:26399476

  15. Effect of Chlorpyrifos Ethyl on Acetylcholinesterase Activity in Climbing Perch (Anabas testudineus, Bloch, 1972).

    PubMed

    Tam, Nguyen Thanh; Berg, Håkan; Tuyen, Phan Thi Bich; Van Cong, Nguyen

    2015-11-01

    The high use of pesticides in intensive rice farming in the Mekong Delta constitutes a potential hazard to the environment and to people's health. Chlorpyrifos ethyl (CPF) is a commonly used organophosphate (OP) insecticide, but information about its potential negative impacts on the aquatic environment in the Mekong Delta is scarce. Both acute and subacute toxicity tests were performed in a static nonrenewable system to investigate the effects of CPF on brain acetylcholinesterase (AChE) activity in native climbing perch fingerlings (Anabas testudineus, Bloch, 1972). Environmental parameters, such as dissolved oxygen, water temperature, and pH, were similar to field conditions in the Mekong Delta. In a 96-h lethal concentration (LC50) test, fingerlings of climbing perch were randomly exposed to five levels of CPF ranging from 0.8 to 4.5 ppm. Five sublethal levels of CPF (1, 5, 10, 15, and 20 % of the 96-h LC50 value) were tested to assess the sensitivity and recovery of the brain AChE activity in climbing perch fingerlings exposed to CPF. The results showed that CPF were moderately toxic to climbing perch with a 96-h median LC50 of 1.73 ppm. CPF also caused long-term AChE inhibition with 70 % inhibition remaining after 96 h for the four highest test concentrations. The recovery of brain AChE activity in fish placed in CPF-free water was very slow, and after 7 days the brain AChE activity was still significant lower in fish from the four highest concentrations compared with the control. The results from this study indicate that OP insecticides, such as CPF, can have long-lasting sublethal effects on aquatic species in the Mekong Delta. PMID:26135300

  16. Echolocation intensity and directionality of perching and flying fringe-lipped bats, Trachops cirrhosus (Phyllostomidae).

    PubMed

    Surlykke, Annemarie; Jakobsen, Lasse; Kalko, Elisabeth K V; Page, Rachel A

    2013-01-01

    The Neotropical frog-eating bat, Trachops cirrhosus, primarily hunts stationary prey, either by gleaning on the wing, or in a sit-and-wait mode hanging from a perch. It listens passively for prey-generated sounds, but uses echolocation in all stages of the hunt. Like other bats in the family Phyllostomidae, T. cirrhosus has a conspicuous nose leaf, hypothesized to direct and focus echolocation calls emitted from the nostrils. T. cirrhosus is highly flexible in its cognitive abilities and its use of sensory strategies for prey detection. Additionally, T. cirrhosus has been observed to echolocate both with closed and open mouth. We hypothesize that its flexibility extends to echolocation call design. We investigated the effect of hunting mode, perching or flying, as well as the effect of mouth opening, on the acoustic parameters and directionality of the echolocation call. We used a multi-microphone array, a high-speed video camera, and a microphone-diode-video system to directly visualize the echolocation sound beam synchronized with the bat's behavior. We found that T. cirrhosus emits a highly directional sound beam with half amplitude angle (HAM) of 12-18° and DI (directionality index) of ~17 dB, among the most directional bat sonar beams measured to date. The directionality was high both when flying and when perching. The emitted intensity was low, around 88 dB SPL at 10 cm from the mouth, when hanging, but higher, around 100 dB SPL at 10 cm, when flying or just before take-off. Our data suggests that the limited search volume of T. cirrhosus sonar beam defined by the high directionality and the rather low intensity of its echolocation calls is adapted to the highly cluttered hunting habitat and to the perch hunting mode. PMID:23825459

  17. Echolocation intensity and directionality of perching and flying fringe-lipped bats, Trachops cirrhosus (Phyllostomidae)

    PubMed Central

    Surlykke, Annemarie; Jakobsen, Lasse; Kalko, Elisabeth K. V.; Page, Rachel A.

    2013-01-01

    The Neotropical frog-eating bat, Trachops cirrhosus, primarily hunts stationary prey, either by gleaning on the wing, or in a sit-and-wait mode hanging from a perch. It listens passively for prey-generated sounds, but uses echolocation in all stages of the hunt. Like other bats in the family Phyllostomidae, T. cirrhosus has a conspicuous nose leaf, hypothesized to direct and focus echolocation calls emitted from the nostrils. T. cirrhosus is highly flexible in its cognitive abilities and its use of sensory strategies for prey detection. Additionally, T. cirrhosus has been observed to echolocate both with closed and open mouth. We hypothesize that its flexibility extends to echolocation call design. We investigated the effect of hunting mode, perching or flying, as well as the effect of mouth opening, on the acoustic parameters and directionality of the echolocation call. We used a multi-microphone array, a high-speed video camera, and a microphone-diode-video system to directly visualize the echolocation sound beam synchronized with the bat's behavior. We found that T. cirrhosus emits a highly directional sound beam with half amplitude angle (HAM) of 12–18° and DI (directionality index) of ~17 dB, among the most directional bat sonar beams measured to date. The directionality was high both when flying and when perching. The emitted intensity was low, around 88 dB SPL at 10 cm from the mouth, when hanging, but higher, around 100 dB SPL at 10 cm, when flying or just before take-off. Our data suggests that the limited search volume of T. cirrhosus sonar beam defined by the high directionality and the rather low intensity of its echolocation calls is adapted to the highly cluttered hunting habitat and to the perch hunting mode. PMID:23825459

  18. Evaluation of daily creel and minimum length limits for Black Crappies and Yellow Perch in Wisconsin

    USGS Publications Warehouse

    Mosel, Kyle; Isermann, Daniel A.; Hansen, Jonathan F.

    2015-01-01

    Harvest regulations for Black Crappie Pomoxis nigromaculatus and Yellow Perch Perca flavescens in the northern USA and Canada have not been thoroughly evaluated, and specific guidance regarding where minimum length limits (MLLs) might improve these fisheries is lacking. We examined whether: (1) transitioning from an aggregate statewide daily creel limit of 25 panfish to species-specific daily creel limits of <25 fish or implementing statewide MLLs could reduce harvest of Black Crappie and Yellow Perch in Wisconsin by ≥25%, and (2) MLLs would improve yield by ≥10% and mean TL of harvested fish by ≥25 mm in Wisconsin fisheries. Creel surveys indicated that ≥94% of Wisconsin anglers did not harvest a Black Crappie or Yellow Perch, and ≤0.12% of anglers harvested a daily creel limit of 25 fish. Daily creel limits would need to be ≤7 fish/ angler to reduce harvest by ≥25%. Statewide MLLs would need to be ≥229 mm for Black Crappie and ≥203 mm for Yellow Perch to reduce harvest by ≥25%, but predicted responses to MLLs varied among simulated populations. In general, MLLs were not predicted to improve yield, indicating that growth overfishing was not a widespread problem. Minimum length limits could improve mean TL of harvested fish, but increases ≥25 mm were only observed under 254-mm and 279-mm MLLs, and anglers would have to accept predicted reductions in harvest of ≥30% to achieve these improvements. A 229-mm MLL offered a more equitable trade-off between increases in mean TLs of harvested fish (11–21-mm improvements) and reductions in harvest (22–37% reductions). Our modeling provides a framework for managers to make more informed decisions regarding harvest regulations, but more information regarding angler preferences is needed for selecting appropriate management objectives and harvest regulations.

  19. Are high perches in the blackcap Sylvia atricapilla song or listening posts? A sound transmission study

    NASA Astrophysics Data System (ADS)

    Mathevon, Nicolas; Dabelsteen, Torben; Blumenrath, Sandra H.

    2005-01-01

    Birds often sing from high perches referred to as song posts. However, birds also listen and keep a lookout from these perches. We used a sound transmission experiment to investigate the changes for receiving and sending conditions that a territorial songbird may experience by moving upwards in the vegetation. Representative song elements of the blackcap Sylvia atricapilla were transmitted in a forest habitat in spring using a complete factorial design with natural transmission distances and speaker and microphone heights. Four aspects of sound degradation were quantified: signal-to-noise ratio, excess attenuation, distortion within the sounds determined as a blur ratio, and prolongation of the sounds with ``tails'' of echoes determined as a tail-to-signal ratio. All four measures indicated that degradation decreased with speaker and microphone height. However, the decrease was considerably higher for the microphone than for the speaker. This suggests that choosing high perches in a forest at spring results in more benefits to blackcaps in terms of improved communication conditions when they act as receivers than as senders. .

  20. Using consumption rate to assess potential predators for biological control of white perch

    USGS Publications Warehouse

    Gosch, N.J.C.; Pope, K.L.

    2011-01-01

    Control of undesirable fishes is important in aquatic systems, and using predation as a tool for biological control is an attractive option to fishery biologists. However, determining the appropriate predators for biological control is critical for success. The objective of this study was to evaluate the utility of consumption rate as an index to determine the most effective predators for biological control of an invasive fish. Consumption rate values were calculated for nine potential predators that prey on white perch Morone americana in Branched Oak and Pawnee reservoirs, Nebraska. The consumption rate index provided a unique and insightful means of determining the potential effectiveness of each predator species in controlling white perch. Cumulative frequency distributions facilitated interpretation by providing a graphical presentation of consumption rates by all individuals within each predator species. Largemouth bass Micropterus salmoides, walleye Sander vitreus and sauger S. canadensis were the most efficient white perch predators in both reservoirs; however, previous attempts to increase biomass of these predators have failed suggesting that successful biological control is unlikely using existing predator species in these Nebraska reservoirs. ?? 2011 ONEMA.

  1. Individual-based model of yellow perch and walleye populations in Oneida Lake

    SciTech Connect

    Rose, K.A.; Rutherford, E.S.; McDermot, D.S.; Forney, J.L.; Mills, E.L.

    1999-05-01

    Predator-prey dynamics and density dependence are fundamental issues in ecology. The authors use a detailed, individual-based model of walleye and yellow perch to investigate the effects of alternative prey and compensatory responses on predator and prey population dynamics. The analyses focus on the numerical and developmental responses of the predator, rather than the traditional emphasis on functional responses. The extensive database for Oneida Lake, New York, USA was used to configure the model and ensure its realism. The model follows the daily growth, mortality, and spawning of individuals of each species through their lifetime. Three ecologically distinct periods in the history of Oneida Lake were simulated: baseline, high mayfly densities, and high forage fish densities. Mayflies and forage fish act as alternative prey for walleye. For model corroboration, the three periods were simulated sequentially as they occurred in Oneida Lake. Model predictions of abundances, size at age, and growth and survival rates compared favorably with Oneida Lake data. Three hypotheses suggested by the data were evaluated: alternative prey stabilizes yellow perch and walleye populations; alternative prey increases yellow perch and walleye recruitment; and density-dependent growth and survival compensate for changes in young-of-the-year mortality. Model simulations were performed under increased mayfly densities, increased forage fish densities, and increased egg mortality rates.

  2. Dietary calcein marking of brook trout, Atlantic salmon, yellow perch, and coho salmon scales

    USGS Publications Warehouse

    Honeyfield, D.C.; Ostrowski, C.S.; Fletcher, J.W.; Mohler, J.W.

    2006-01-01

    Brook trout Salvelinus fontinalis, Atlantic salmon Salmo salar, coho salmon Oncorhynchus kisutch, and yellow perch Perca flavescens fed calcein for 5 d showed characteristic calcein scale marks 7-10 d postmarking. In fish fed 0.75 or 1.25 g of calcein per kilogram of feed, the percentage of fish that exhibited a calcein mark was 100% in brook trout, 93-98% in Atlantic salmon, 60% in yellow perch, and 0% in coho salmon. However, when coho salmon were fed 5.25 g calcein/kg feed, 100% marking was observed 7-10 d postmarking. Brook trout were successfully marked twice with distinct bands when fed calcein 5 months apart. Brook trout scale pixel luminosity increased as dietary calcein increased in experiment 2. For the second calcein mark, scale pixel luminosity from brook trout fed 1.25 g calcein/kg feed was numerically higher (P < 0.08) than scales from fish fed 0.75 g calcein/kg feed. Mean pixel luminosity of calcein-marked Atlantic salmon scales was 57.7 for fish fed 0.75 g calcein/kg feed and 55.2 for fish fed 1.25 g calcein/kg feed. Although feed acceptance presented a problem in yellow perch, these experiments provide evidence that dietary calcein is a viable tool for marking fish for stock identification. ?? Copyright by the American Fisheries Society 2006.

  3. Induction of gynogenesis in muskellunge with irradiated sperm of yellow perch proves diploid muskellunge male homogamety.

    PubMed

    Dabrowski, K; Rinchard, J; Lin, F; Garcia-Abiado, M A; Schmidt, D

    2000-06-15

    Diploid gynogenesis was induced in muskellunge Esox masquinongy using UV-irradiated muskellunge sperm as the first step in producing monosex females. In this approach, we have to rely on negative controls as an indirect reference for sperm genetic material destruction. In the first experiment, equal proportions of gynogenetic females and males were produced. Negative controls, UV-irradiated sperm without heat shock, yielded some normal hatching larvae, described as spontaneous diploids. In the second experiment, muskellunge eggs were activated using sperm from yellow perch. Because hybrids between these species are not viable, we produced unambiguous gynogens. When UV-irradiated yellow perch sperm was used to inseminate muskellunge eggs, haploids resulted (22.5% +/- 2.8% survival to the eyed stage). To produce diploid gynogens, a heat shock of 31 degrees C was applied to inseminated eggs 20 min after activation for a duration of 6 min. This process yielded several hundreds of gynogens for rearing. Several treatments of masculinizing hormone, 17alpha-methyltestosterone (MT), were carried out. Fish were dissected and gonads examined histologically for sex determination. Gynogens produced using yellow-perch sperm confirmed the presence of males in the control group, whereas the MT bath treatment (400 microg/liter) resulted in the production of fish with ovotestis. These results provide evidence for male homogamety in muskellunge and imply that a change of strategy is needed to produce monosex populations. PMID:10861556

  4. Morphological alterations in the liver of yellow perch (Perca flavescens) from a biological mercury hotspot.

    PubMed

    Müller, Anne-Katrin; Brinkmann, Markus; Baumann, Lisa; Stoffel, Michael H; Segner, Helmut; Kidd, Karen A; Hollert, Henner

    2015-11-01

    Mercury (Hg) contamination is a global issue due to its anthropogenic release, long-range transport, and deposition in remote areas. In Kejimkujik National Park and National Historic Site, Nova Scotia, Canada, high concentrations of total mercury (THg) were found in tissues of yellow perch (Perca flavescens). The aim of this study was to evaluate a possible relationship between THg concentrations and the morphology of perch liver as a main site of metal storage and toxicity. Yellow perch were sampled from five lakes known to contain fish representing a wide range in Hg concentrations in fall 2013. The ultrastructure of hepatocytes and the distribution of Hg within the liver parenchyma were analyzed by transmission electron microscopy (TEM) and electron energy loss spectrometry (EELS). The relative area of macrophage aggregates (MAs) in the liver was determined using image analysis software and fluorescence microscopy. No relation between general health indicators (Fulton's condition index) and THg was observed. In line with this, TEM examination of the liver ultrastructure revealed no prominent pathologies related to THg accumulation. However, a morphological parameter that appeared to increase with muscle THg was the relative area of MAs in the liver. The hepatic lysosomes appeared to be enlarged in samples with the highest THg concentrations. Interestingly, EELS analysis revealed that the MAs and hepatic lysosomes contained Hg. PMID:25936831

  5. Water Fluxes Across the Interfaces of Perched Wetland Basins on the Boreal Plain

    NASA Astrophysics Data System (ADS)

    Mendoza, C. A.; Riddell, J.; Devito, K.

    2009-05-01

    Perched pond-wetland systems appear to be common on many heterogeneous glacial deposits of the Boreal Plain in Alberta. These systems provide important habitat for Boreal plant and animal communities, and may be vital sources of water for adjacent upland vegetation. The study site is situated on heterogeneous glacial deposits with subdued topography within a sub-humid climate, and is characterized by numerous wetlands surrounded by aspen uplands. The unsaturated nature of the uplands results in laterally discontinuous perched water tables and ponds, and ubiquitous interfaces between local and regional groundwater, surface- water, upland and atmosphere regimes. Detailed hydrometric data were collected, over two hydrologic years, along transects from both a shallow pond and a peatland to their adjacent uplands. These data, combined with simulations using a fully coupled numerical model (HydroGeoSphere), were used to quantify fluxes across the interfaces and changes in storage within different hydrologic compartments. Perched conditions result from the presence of a laterally extensive, low-permeability confining layer underlying coarser-grained (i.e., silt and sand) deposits of variable thickness. The depth to the confining layer in conjunction with atmospheric fluxes controls the spatial distribution of soil-water storage potential, and thus the magnitude and spatial distribution of water fluxes. There is little hydrologic connectivity between adjacent wetlands or between wetlands and the regional groundwater flow systems. Consequently, vertical water fluxes dominate due to the sub-humid climate, available soil-water storage, and isolation from regional groundwater systems.

  6. Comparison of nutritional quality in fish maw product of croaker Protonibea diacanthus and perch Lates niloticus

    NASA Astrophysics Data System (ADS)

    Wen, Jing; Zeng, Ling; Chen, Ziming; Xu, Youhou

    2016-08-01

    Fish maw (the dried swimbladders of fish) is ranked in the list of the four sea treasures in Chinese cuisine. Fish maw is mainly produced from croaker, which is the most highly priced. However, some of the fish maw being sold as croaker maw are in fact not from croaker, but from the Nile perch Lates niloticus. The present work determined and compared the proximate composition, amino acid and fatty acid composition of croaker Protonibea diacanthus maw and perch L. niloticus maw. The results indicated that both maws were high protein sources and low in fat content. The dominant amino acids in both maws were glycine, proline, glutamic acid, alanine and arginine. These amino acids constituted 66.2% and 66.4% of the total amino acids in P. diacanthus and L. niloticus, respectively. The ratio of FAA: TAA (functional amino acids: total amino acids) in both maws were 0.69. This is a good explanation for why fish maws have been widely utilized as a traditional tonic and remedy in Asia. Except valine and histidine, all the essential amino acid contents in P. diacanthus were higher than in L. niloticus. Moreover, croaker P. diacanthus maw contained more AA and DHA than perch L. niloticus maw, showing a higher ratio of n-3 / n-6, which is more desirable.

  7. Biomarker investigations in adult female perch (Perca fluviatilis) from industrialised areas in northern Sweden in 2003.

    PubMed

    Hansson, Tomas; Hansen, Wenche; Tjärnlund, Ulla; Balk, Lennart; Bengtsson, Bengt-Erik

    2014-02-01

    Since the new millennium, a notion has developed in certain parts of society that environmental pollutants and their associated effects are under control. The primary objective of this investigation, performed in 2003, was to test whether this was actually the case in an industrialised region in the County of Västernorrland in northern Sweden with well-documented environmental pollution from past and present activities. This was performed by measuring a moderate battery of simple biomarkers in adult female perch at several stations. The point sources included sewage-treatment plants, pulp and paper mills, as well as other industries. The biomarkers included growth, somatic indices, gonad maturation status, gonad pigmentation, fin erosion, skin ulcers, and ethoxyresorufin-O-deethylase (EROD) activity in the liver. The results showed that the environmental pollutants and their associated effects were not under control. In fact, the health of the perch was impaired at all of the polluted stations. Many responses were unspecific with respect to underlying cause, whereas some effects on EROD activity and gonad maturation status were attributed to historical creosote pollution and current kraft pulp mill effluents, respectively. The data presented may also be used as reference values for future investigations of health effects in perch. PMID:24297393

  8. Mechanisms of Egg Yolk Formation and Implications on Early Life History of White Perch (Morone americana)

    PubMed Central

    Schilling, Justin; Loziuk, Philip L.; Muddiman, David C.; Daniels, Harry V.; Reading, Benjamin J.

    2015-01-01

    The three white perch (Morone americana) vitellogenins (VtgAa, VtgAb, VtgC) were quantified accurately and precisely in the liver, plasma, and ovary during pre-, early-, mid-, and post-vitellogenic oocyte growth using protein cleavage-isotope dilution mass spectrometry (PC-IDMS). Western blotting generally mirrored the PC-IDMS results. By PC-IDMS, VtgC was quantifiable in pre-vitellogenic ovary tissues and VtgAb was quantifiable in pre-vitellogenic liver tissues however, neither protein was detected by western blotting in these respective tissues at this time point. Immunohistochemistry indicated that VtgC was present within pre-vitellogenic oocytes and localized to lipid droplets within vitellogenic oocytes. Affinity purification coupled to tandem mass spectrometry using highly purified VtgC as a bait protein revealed a single specific interacting protein (Y-box binding protein 2a-like [Ybx2a-like]) that eluted with suramin buffer and confirmed that VtgC does not bind the ovary vitellogenin receptors (LR8 and Lrp13). Western blotting for LR8 and Lrp13 showed that both receptors were expressed during vitellogenesis with LR8 and Lrp13 expression highest in early- and mid-vitellogenesis, respectively. The VtgAa within the ovary peaked during post-vitellogenesis, while VtgAb peaked during early-vitellogenesis in both white perch and the closely related striped bass (M. saxatilis). The VtgC was steadily accumulated by oocytes beginning during pre-vitellogenesis and continued until post-vitellogenesis and its composition varies widely between striped bass and white perch. In striped bass, the VtgC accounted for 26% of the vitellogenin-derived egg yolk, however in the white perch it comprised only 4%. Striped bass larvae have an extended developmental window and these larvae have yolk stores that may enable them to survive in the absence of food for twice as long as white perch after hatch. Thus, the VtgC may play an integral role in providing nutrients to late stage

  9. Molecular characterization of two immunity-related acute-phase proteins: Haptoglobin and serum amyloid A from black rockfish (Sebastes schlegeli).

    PubMed

    Jayasinghe, J D H E; Elvitigala, Don Anushka Sandaruwan; Whang, Ilson; Nam, Bo-Hye; Lee, Jehee

    2015-08-01

    Haptoglobin (Hp) and serum amyloid A (SAA) are two vital proteins involved in inflammatory reactions and are classified as acute-phase proteins. They are released from hepatocytes under inflammatory conditions to protect healthy cells from being damaged by pathogens or from self-destructive mechanisms. In this study, a previously constructed black rockfish (Sebastes schlegeli) cDNA library was used to identify the full-length cDNA sequences of Hp and SAA homologs (RfHp and RfSAA, respectively) and characterize them at the molecular level. As expected, in silico analysis of these homologs showed the typical domain architectures of their known counterparts. Open reading frames of RfHp and RfSAA consisted of 942-bp and 313-bp DNA sequences, respectively. The derived polypeptide sequence of RfHp was composed of 313 amino acids (aa) with a predicted molecular weight of 34 kD, whereas RfSAA had a 121-amino acid sequence with a molecular weight of 13 kD. Phylogenetic analysis as well as pairwise sequence alignment results showed that RfHp was more closely related to Oreochromis mossambicus from an evolutionary perspective while RfSAA was closely related to the Epinephelus coioides ortholog. Although both genes were expressed ubiquitously in the tissues analyzed, they were particularly expressed in liver tissue, suggesting their origin in hepatocytes. Quantitative real-time PCR analysis indicated that both RfHp and RfSAA were significantly up-regulated by both bacterial and viral stimulation in liver tissue, affirming their putative importance in the acute phase of first-line host immune defenses. PMID:25989623

  10. A thioredoxin domain-containing protein 12 from black rockfish Sebastes schlegelii: Responses to immune challenges and protection from apoptosis against oxidative stress.

    PubMed

    Thulasitha, William Shanthakumar; Umasuthan, Navaneethaiyer; Jayasooriya, R G P T; Noh, Jae Koo; Park, Hae-Chul; Lee, Jehee

    2016-01-01

    Thioredoxin (TXN) superfamily proteins are identified by the presence of a thioredoxin active site with a conserved CXXC active motif. TXN members are involved in a wide range of biochemical and biological functions including redox regulation, refolding of disulfide containing proteins, and regulation of transcription factors. In the present study, a thioredoxin domain-containing protein 12 was identified and characterized from black rockfish, Sebastes schlegelii (RfTXNDC12). The full length of RfTXNDC12 consists of a 522-bp coding region encoding a 173-amino acid protein. It has a 29-amino acid signal peptide and a single TXN active site with a consensus atypical WCGAC active motif. Multiple sequence alignment revealed that the active site is conserved among vertebrates. RfTXNDC12 shares highest identity with its Epinephelus coioides homolog. Transcriptional analysis revealed its ubiquitous expression in a wide range of tissues with the highest expression in the ovary. Immune challenges conducted with Streptococcus iniae and poly I:C caused upregulation of RfTXNDC12 transcript levels in gills and peripheral blood cells (PBCs), while lipopolysaccharide injection caused downregulation of RfTXNDC12 in gills and upregulation in PBCs. Similar to TXN, RfTXNDC12 exhibited insulin disulfide reducing activity. Interestingly, the recombinant protein showed significant protection of LNCaP cells against apoptosis induced by H2O2-mediated oxidative stress in a concentration dependent manner. Collectively, the present data indicate that RfTXNDC12 is a TXN superfamily member, which could function as a potential antioxidant enzyme and be involved in a defense mechanism against immune challenges. PMID:26945103

  11. Decrease of Population Divergence in Eurasian Perch (Perca fluviatilis) in Browning Waters: Role of Fatty Acids and Foraging Efficiency.

    PubMed

    Scharnweber, Kristin; Strandberg, Ursula; Karlsson, Konrad; Eklöv, Peter

    2016-01-01

    Due to altered biogeochemical processes related to climate change, highly colored dissolved organic carbon (DOC) from terrestrial sources will lead to a water "brownification" in many freshwater systems of the Northern Hemisphere. This will create deteriorated visual conditions that have been found to affect habitat-specific morphological variations in Eurasian perch (Perca fluviatilis) in a previous study. So far, potential drivers and ultimate causes of these findings have not been identified. We conducted a field study to investigate the connection between morphological divergence and polyunsaturated fatty acid (PUFA) composition of perch from six lakes across a gradient of DOC concentration. We expected a decrease in the prevalence of PUFAs, which are important for perch growth and divergence with increasing DOC concentrations, due to the restructuring effects of DOC on aquatic food webs. In general, rate of morphological divergence in perch decreased with increasing DOC concentrations. Proportions of specific PUFAs (22:6n-3, 18:3n-3, 20:5n-3, and 20:4n-6) identified to primarily contribute to overall differences between perch caught in clear and brown-water lakes tended to be connected to overall decline of morphological divergence. However, no overall significant relationship was found, indicating no severe limitation of essential fatty acids for perch inhabiting brown water lakes. We further broaden our approach by conducting a laboratory experiment on foraging efficiency of perch. Therefore, we induced pelagic and littoral phenotypes by differences in habitat-structure and feeding mode and recorded attack rate in a feeding experiment. Generally, fish were less efficient in foraging on littoral prey (Ephemeroptera) when visual conditions were degraded by brown water color. We concluded that browning water may have a strong effect on the forager's ability to find particular food resources, resulting in the reduced development of evolutionary traits, such as

  12. The Effect of Cooled Perches on Immunological Parameters of Caged White Leghorn Hens during the Hot Summer Months

    PubMed Central

    Strong, Rebecca A.; Hester, Patricia Y.; Eicher, Susan D.; Hu, Jiaying; Cheng, Heng-Wei

    2015-01-01

    The objective of this study was to determine if thermally cooled perches improve hen immunity during hot summer. White Leghorn pullets at 16 week of age were randomly assigned to 18 cages of 3 banks at 9 hens per cage. Each bank was assigned to 1 of the 3 treatments up to 32 week of age: 1) thermally cooled perches, 2) perches with ambient air, and 3) cages without perches. Hens were exposed to natural ambient temperatures from June through September 2013 in Indiana with a 4 h acute heat episode at 27.6 week of age. The packed cell volume, heterophil to lymphocyte (H/L) ratio, plasma concentrations of total IgG, and cytokines of interleukin-1β and interleukin-6, plus lipopolysaccharide-induced tumor necrosis factor-α factor were measured at both 27.6 and 32 week of age. The mRNA expressions of these cytokines, toll-like receptor-4, and inducible nitric oxide synthase were also examined in the spleen of 32 week-old hens. Except for H/L ratio, thermally cooled perches did not significantly improve currently measured immunological indicators. These results indicated that the ambient temperature of 2013 summer in Indiana (24°C, 17.1 to 33.1°C) was not high enough and the 4 h heat episode at 33.3°C (32 to 34.6°C) was insufficient in length to evoke severe heat stress in hens. However, cooled perch hens had a lower H/L ratio than both air perch hens and control hens at 27.6 week of age and it was still lower compared to control hens (P < 0.05, respectively) at 32 week of age. The lowered H/L ratio of cooled perch hens may suggest that they were able to cope with acute heat stress more effectively than control hens. Further studies are needed to evaluate the effectiveness of thermally cooled perches on hen health under higher ambient temperatures. PMID:26495988

  13. The Effect of Cooled Perches on Immunological Parameters of Caged White Leghorn Hens during the Hot Summer Months.

    PubMed

    Strong, Rebecca A; Hester, Patricia Y; Eicher, Susan D; Hu, Jiaying; Cheng, Heng-Wei

    2015-01-01

    The objective of this study was to determine if thermally cooled perches improve hen immunity during hot summer. White Leghorn pullets at 16 week of age were randomly assigned to 18 cages of 3 banks at 9 hens per cage. Each bank was assigned to 1 of the 3 treatments up to 32 week of age: 1) thermally cooled perches, 2) perches with ambient air, and 3) cages without perches. Hens were exposed to natural ambient temperatures from June through September 2013 in Indiana with a 4 h acute heat episode at 27.6 week of age. The packed cell volume, heterophil to lymphocyte (H/L) ratio, plasma concentrations of total IgG, and cytokines of interleukin-1β and interleukin-6, plus lipopolysaccharide-induced tumor necrosis factor-α factor were measured at both 27.6 and 32 week of age. The mRNA expressions of these cytokines, toll-like receptor-4, and inducible nitric oxide synthase were also examined in the spleen of 32 week-old hens. Except for H/L ratio, thermally cooled perches did not significantly improve currently measured immunological indicators. These results indicated that the ambient temperature of 2013 summer in Indiana (24°C, 17.1 to 33.1°C) was not high enough and the 4 h heat episode at 33.3°C (32 to 34.6°C) was insufficient in length to evoke severe heat stress in hens. However, cooled perch hens had a lower H/L ratio than both air perch hens and control hens at 27.6 week of age and it was still lower compared to control hens (P < 0.05, respectively) at 32 week of age. The lowered H/L ratio of cooled perch hens may suggest that they were able to cope with acute heat stress more effectively than control hens. Further studies are needed to evaluate the effectiveness of thermally cooled perches on hen health under higher ambient temperatures. PMID:26495988

  14. Hypoxia tolerance of introduced Nile perch: Implications for survival of indigenous fishes in the Lake Victoria basin

    USGS Publications Warehouse

    Schofield, P.J.; Chapman, L.J.

    2000-01-01

    The introduction of predatory Nile perch (Lates niloticus) into the Lake Victoria basin coincided with a dramatic decline in fish diversity. However, remnant populations of indigenous fishes persist in lagoons and satellite lakes separated from the main lakes by extensive areas of swamp, while other indigenous species find refuge in ecotonal areas at edges of marginal swamps in the main lakes. Low-oxygen conditions in these wetlands may physiologically stress Nile perch and therefore minimize its interaction with prey species. This study examined the low-oxygen tolerance of Nile perch collected from Lake Nabugabo, Uganda, by documenting behavioural and physiological strategies that relate to oxygen uptake. In response to hypoxia, Nile perch used aquatic surface respiration (ASR) at the air-water interface, ventilating their gills with water from the surface. However, several lines of evidence suggest that Nile perch in Lake Nabugabo are inefficient at ASR and relatively intolerant of low oxygen conditions. These include high thresholds for ASR relative to other indigenous fishes of the Lake Victoria basin, no decrease in gill ventilation rate with the onset of ASR, a faster time to loss of equilibrium in hypoxic conditions than other species from the region, and a high critical oxygen tension (24 mm Hg).

  15. Lake phosphorus loading from septic systems by seasonally perched ground water, Puget Sound region, Washington

    USGS Publications Warehouse

    Gilliom, Robert J.; Patmont, Clayton R.

    1982-01-01

    In a previous study, estimated phosphorus (P) loadings from septic systems to lakes in the Puget Sound region were found to be correlated with the presence of old homes around the lakes. In the present study, we assessed the movement of septic-effluent P in seasonally perched ground water near Pine Lake, a typical glacial-till lake in the region. This ground water occurs in soils overlying less permeable glacial till, which is prevalent around Pine Lake and many other lakes in the area. Water samples were taken from 15 shallow (<1.5 meters) wells installed 10-50 meters downgradient from seven septic systems 20 to 40 years old. The equivalent volumetric fraction of each sample consisting of undiluted effluent was estimated from chloride concentration. Using Monte Carlo analysis to account for the various sources of uncertainty, we found that, though movement of diluted septic effluent to the lake was common, transport of more than 1% of effluent P through the soil was probable (p > or = 0.5) for only 4 of 26 samples, was transport of more than 10% of effluent P probable. The highest probabilities of P movement were associated with two samples from a well that was downgradient from a drainfield located at the base of a hillslope depression where perched ground water concentrates and remains for extended periods. All evidence considered, most P loading to Pine Lake from septic systems appears to come from only a few older systems located in areas where perched ground-water flow and associated saturated soil conditions predominate for extended periods during the winter season. (USGS)

  16. Effects of methylmercury on epigenetic markers in three model species: mink, chicken and yellow perch

    PubMed Central

    Basu, Niladri; Head, Jessica; Nam, Dong-Ha; Pilsner, J. Richard; Carvan, Michael J; Chan, Hing Man; Goetz, Frederick W; Murphy, Cheryl A; Rouvinen-Watt, Kirsti; Scheuhammer, Anton M

    2015-01-01

    We previously reported that methylmercury (MeHg) exposure is associated with DNA hypomethylation in the brain stem of male polar bears. Here, we conveniently use archived tissues obtained from controlled laboratory exposure studies to look for evidence that MeHg can disrupt DNA methylation across taxa. Brain (cerebrum) tissues from MeHg-exposed mink (Neovison vison), chicken (Gallus gallus) and yellow perch (Perca flavescens) were analyzed for total Hg levels and global DNA methylation. Tissues from chicken and mink, but not perch, were also analyzed for DNA methyltransferase (DNMT) activity. In mink we observed significant reductions in global DNA methylation in an environmentally-relevant dietary exposure group (1ppm MeHg), but not in a higher group (2ppm MeHg). DNMT activity was significantly reduced in all treatment groups. In chicken or yellow perch, no statistically significant effects of MeHg were observed. Dose-dependent trends were observed in the chicken data but the direction of the change was not consistent between the two endpoints. Our results suggest that MeHg can be epigenetically active in that it has the capacity to affect DNA methylation in mammals. The variability in results across species may suggest inter-taxa differences in epigenetic responses to MeHg, or may be related to differences among the exposure scenarios used as animals were exposed to MeHg through different routes (dietary, egg injection), for different periods of time (19 – 89 days) and at different life stages (embryonic, juvenile, adult). PMID:23481557

  17. Persistence of malachite green and leucomalachite green in perch ( Lateolabrax japonicus)

    NASA Astrophysics Data System (ADS)

    Tan, Zhijun; Xing, Lihong; Guo, Mengmeng; Wang, Hongyan; Jiang, Yanhua; Li, Zhaoxin; Zhai, Yuxiu

    2011-05-01

    The persistence of malachite green (MG), and its metabolite leucomalachite green (LMG), in fish tissues is still unclear, leading to many trade disputes. In this research, we established and evaluated an HPLC method that could detect MG and LMG simultaneously, and then investigated the persistence of these two toxins in the tissues of juvenile perch ( Lateolabrax japonicus) post sub-chronic MG exposure at 1.0 mg/L. Exposure lasted for 2 h everyday and was repeated six times. The perch were then placed in MG-free seawater for 100 d to eliminate the toxins. Results show that MG accumulated in the tissues, including the gills, liver, muscle, blood and viscera, and then was metabolized rapidly to LMG. The concentrations of these two toxins increased significantly with the accumulation process. In general, the highest concentrations of MG and LMG in all tissue exceeded 1 000 μg/kg, except for MG in the muscle. The order of accumulation levels (highest to lowest) of MG was gill>blood>liver>viscera>muscle, while that of LMG was liver>blood>gill>viscera>muscle. High levels of MG or LMG could persist for several hours but decreased rapidly during the elimination process. The concentration of LMG was much higher than that of MG during the experiment, especially in the gill, liver and blood. Therefore, the three tissues play important roles in toxin accumulation, biotransformation, and elimination. Although the MG and LMG concentrations in muscle were much lower than in other tissues, the content still exceeded the European minimum required performance limit (MRPL), even after 2 400 h (100 d) of elimination. This demonstrates that it is extremely difficult to eliminate MG and LMG from tissues of perch, and therefore use of these toxins is of concern to public health.

  18. Piscidins in the intestine of European perch, Perca fluviatilis, naturally infected with an enteric worm.

    PubMed

    Dezfuli, Bahram S; Lui, Alice; Giari, Luisa; Pironi, Flavio; Manera, Maurizio; Lorenzoni, Massimo; Noga, Edward J

    2013-11-01

    This study set out to determine how an enteric parasite, the thorny-headed worm Acanthocephalus lucii, affected the expression of antimicrobial peptides (piscidins) in its host population, the European perch (Perca fluviatilis) collected from Lake Piediluco in Central Italy. A total of 87 perch were examined; 44 (50.5%) were infected with A. lucii (1-18 worms fish(-1)). Pathological changes and immune response were assessed using histological, ultrastructural and immunohistochemical techniques. The acanthocephalans only penetrated the surficial zone of the intestinal wall and induced only slight inflammation. The main damage was destruction of the mucosal epithelium covering the villi adjacent to the parasite's attachment site, and included necrosis and degeneration. Infected intestine had numerous mast cells (MCs), often in close proximity to, and within, the capillaries, and were associated with fibroblasts of the submucosal layer. Mast cells were irregular in shape with a cytoplasm filled by numerous electron-dense, membrane-bounded granules. Immunostaining of intestine with antibodies against the antimicrobial peptides piscidin 3 and piscidin 4 showed subpopulations of MCs that were positive. Piscidin-positive MCs were mainly observed among the epithelial cells of the intestine, but also within the submucosa. In both uninfected and parasite-infected perch, the number of MCs positive for piscidin 4 was higher than those immunoreactive with piscidin 3 (p < 0.05). For both piscidins, there was no significant difference in the number of positive MCs between parasite-infected and uninfected intestine (p > 0.05). However, uninfected fish showed higher immunostaining intensity for piscidin 3 than infected conspecifics (p < 0.05). PMID:24012748

  19. The effects of salinity on naphthenic acid toxicity to yellow perch: gill and liver histopathology.

    PubMed

    Nero, V; Farwell, A; Lee, L E J; Van Meer, T; MacKinnon, M D; Dixon, D G

    2006-10-01

    Naphthenic acids (NAs) are naturally occurring saturated linear and cyclic carboxylic acids found in petroleum, including the bitumen contained in the Athabasca Oil Sands deposit in Alberta, Canada. The processing of these oil sands leads to elevated concentrations of NAs, as well as increased salinity from produced waters as a result of ions leaching from the ores, the process aids, and the water associated with the deeper aquifers. These changes can result in waters that challenge reclamation of impacted waters associated with oil sands development. Laboratory tests examined the effects of salinity on NA toxicity using local young-of-the-year yellow perch exposed to a commercially available mixture of NAs (CNA) and an NA mixture that was extracted from oil sands process-affected water (ENA), with and without the addition of sodium sulfate (Na(2)SO(4)). Gill and liver histopathological changes were evaluated in the surviving fish after 3 weeks of exposure. At 6.8 mg/L ENA and 3.6 mg/L CNA, 100% mortality was observed, both with and without the addition of salt. Exposure of yellow perch to 25% of the NA required to give an LC100 (0.9 mg/L CNA; 1. 7 mg/L ENA) resulted in high levels of gill proliferative (epithelial, mucous, and chloride cell) changes, a response that was increased with the addition of 1g/L salt (Na2SO4) for the ENA. The significance of these changes was a reduced gill surface area, which likely caused a reduction in both the transport of NAs within the fish and the exchange of vital respiratory gases. While the gills were affected, no liver alterations were identified following NA or NA+salt exposures. Differences in the chemical composition of the NAs tested may explain the differences in the lethality and histopathology of yellow perch. PMID:16129489

  20. Nourishment of perched sand dunes and the issue of erosion control in the Great Lakes

    NASA Astrophysics Data System (ADS)

    Marsh, William M.

    1990-09-01

    Although limited in coverage, perched sand dunes situated on high coastal bluffs are considered the most prized of Great Lakes dunes. Grand Sable Dunes on Lake Superior and Sleeping Bear Dunes on Lake Michigan are featured attractions of national lakeshores under National Park Service management. The source of sand for perched dunes is the high bluff along their lakeward edge. As onshore wind crosses the bluff, flow is accelerated upslope, resulting in greatly elevated levels of wind stress over the slope brow. On barren, sandy bluffs, wind erosion is concentrated in the brow zone, and for the Grand Sable Bluff, it averaged 1 m3/yr per linear meter along the highest sections for the period 1973 1983. This mechanism accounts for about 6,500 m3 of sand nourishment to the dunefield annually and clearly has been the predominant mechanism for the long-term development of the dunefield. However, wind erosion and dune nourishment are possible only where the bluff is denuded of plant cover by mass movements and related processes induced by wave erosion. In the Great Lakes, wave erosion and bluff retreat vary with lake levels; the nourishment of perched dunes is favored by high levels. Lake levels have been relatively high for the past 50 years, and shore erosion has become a major environmental issue leading property owners and politicians to support lake-level regulation. Trimming high water levels could reduce geomorphic activity on high bluffs and affect dune nourishment rates. Locally, nourishment also may be influenced by sediment accumulation associated with harbor protection facilities and by planting programs aimed at stabilizing dunes.

  1. Relative importance of perch and facilitative effects on nucleation in tropical woodland in Malawi

    NASA Astrophysics Data System (ADS)

    Fujita, Tomohiro

    2016-01-01

    Individual trees in open vegetation such as woodlands can act as "nuclei" for the colonization of forest tree species, which consequently lead to the formation of forest patches. This phenomenon is known as nucleation. The mechanism of nucleation is generally attributed to two factors: trees provide perches for frugivores that increase seed deposition (perch effect), and tree crowns ameliorate environmental conditions, which improves seedling establishment (facilitative effect). Few studies have attempted to distinguish the relative importance of these two factors. In this study, I separated these two effects in a woodland in northern Malawi. I chose Ficus natalensis as a potential nuclei tree because large individuals of this species are commonly located at the center of forest patches within open woodland at the study site. I monitored several environmental variables, seedling survival, seedling composition, and seed rain at three microsites: under F. natalensis, under Brachystegia floribunda (a dominant woodland species), and in open sites. Both tree species provided similar favorable conditions for the establishment of forest species compared to open sites. Thus, the survival of forest tree seedlings under F. natalensis and B. floribunda was similar, and substantially higher than seedling survival in open sites. However, communities of naturally occurring seedlings differed significantly between F. natalensis and B. floribunda. These results indicate that the facilitative effect alone cannot explain the nucleation pattern. I attribute this result to the perch effect of F. natalensis because the forest seedling species recorded under F. natalensis reportedly have small, brightly colored diaspores, which are indicative of dispersal by birds. Seed deposition of forest species under F. natalensis was significantly higher than that under B. floribunda or in open sites. My findings reinforce the idea that trees will lead to nucleation when they enhance seed

  2. Complete mitochondrial genome of the endemic species Korean aucha perch Coreoperca herzi (Teleostei, Centrarchiformes, Sinipercidae).

    PubMed

    Park, Chang Eon; Park, Gun-Seok; Kwak, Yunyoung; Hong, Sung-Jun; Khan, Abdur Rahim; Jung, Byung Kwon; Park, Yeong-Jun; Kim, Min-Chul; Kim, Kgu-Hwan; Park, Hee Cheon; Lee, In-Jung; Shin, Jae-Ho

    2016-09-01

    In this study, we sequenced the complete mitochondrial genome of the endemic species Korean aucha perch Coreoperca herzi (Teleostei, Centrarchiformes, Sinipercidae). The mitogenome, consisting of 16 495 base pairs (bp), encoded 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs) and 2 non-coding region. The overall base composition of C. herzi is G + C: 46.3%, A + T: 53.7%, apparently with a slight AT bias. Phylogenetic analysis showed that the C. herzi was closed to Coreoperca kawamebari. PMID:26181210

  3. The role of the perch effect on the nucleation process in Mediterranean semi-arid oldfields

    NASA Astrophysics Data System (ADS)

    Pausas, Juli G.; Bonet, Andreu; Maestre, Fernando T.; Climent, Anna

    2006-05-01

    Oldfield succession in Mediterranean ecosystems has been studied extensively in mesic conditions. However, this phenomenon is still poorly understood in semi-arid Mediterranean areas, where reduced plant cover, the importance of facilitation processes and the role of abiotic factors make these environments distinct. We first test whether the carob tree ( Ceratonia siliqua) generates nucleation patterns in semi-arid oldfields, and to what extent such patterns change with abandonment age. Then we test to what extent nucleation can be explained by the perch effect. And finally, we test whether the nucleated pattern around carob trees is a source of diversity in the oldfields studied. To answer these questions we located oldfields abandoned 25 and 50 years ago (20 in each case) in the Alacant Province (SE Spain, Iberian Peninsula) on the basis of aerial photographs and personal interviews with local landowners and managers. In each oldfield woody plant density and richness were sampled on two microsites: under the carob tree and in the open field. Analysis was performed on all woody plants and by separating the species in two functional groups: fleshy-fruited (with fleshy mesocarp) and non-fleshy-fruited species. The results suggest that woody vegetation colonising abandoned C. siliqua fields in SE Spain is not randomly distributed but follows a nucleation pattern with higher plant density under the trees. However, the nucleation pattern is only significant for fleshy-fruited species, suggesting that facilitative interactions alone cannot explain the nucleation pattern and that the perch effect plays an important role. The results also show that the nucleation pattern (total plant density and density of non-fleshy-fruited plants) did not increase with abandonment age, while the perch effect (density of fleshy-fruited plants) did increase significantly. Furthermore, the results also show that the nucleation pattern is not only a loci of high plant density but also a

  4. [L-fucose-specific lectin from pike perch (Lucioperca lucioperca L.) roe. Purification and studies of carbohydrate specificity].

    PubMed

    Antoniuk, V O

    2004-01-01

    L-fucose-specific lectin was purified from pike perch (Lucioperca lucioperca L.) roe by affinity chromatography on ovariomucine H-sepharose from a human ovary cyst. Three bands were detected after disk-electrophoresis in PAAG in alkaline (pH 8.9) and five bands--in acidic system (pH 4.3). According to electrophoresis data in 15% SDS-PAGE the lectin contains two components with molecular weight 13-14 kDa. Molecular weight of the lectin is 50 kDa according to gel-chromatography on tojopearl HW-55. The immunochemical properties of the lectins from perch (Persa fluviatilis L.) roe and pike perch (Lucioperca lucioperca L.) roe are similar. PMID:15915715

  5. Investigation of the potential relationship between chlorinated volatile organic compounds in a perched aquifer and a regional aquifer

    SciTech Connect

    Patton, K.; Stellar, J.R.; Sohn, M.D. )

    1993-10-01

    Beneath an industrial site in Los Angeles County, CA, chlorinated volatile organic compounds (VOCs) have been discovered in a shallow perched and a regional aquifer. VOCs detected in the perched aquifer include tetrachloroethene (PCE), trichloroethene (TCE), 1,2-dichloroethane (1,2-DCA), and cis-1,2-dichloroethene (cis-1,2-DCE), and vinyl chloride. The aromatics benzene, toluene, and xylene have also been detected. Comparison of analytical results collected between 1986 and 1993 indicate the concentrations of VOCs in the perched aquifer have steadily decreased over time, with the exception of PCE and TCE. VOCs in the regional aquifer include PCE, TCE, cis-1,2-DCE, and chloroform. Analytical results from 1987 through 1993 indicate the concentrations of VOCs in the Exposition-Gage Aquifer beneath the site have steadily increased. However, upgradient ground-water quality analysis indicates only a trace level (2 ppb) of toluene present.

  6. Seasonal and Sex-Specific mRNA Levels of Key Endocrine Genes in Adult Yellow Perch (Perca flavescens) from Lake Erie

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Yellow perch exhibit a sexual size dimorphism (SSD) where females grow faster and larger than males and estrogen preferentially stimulates growth in females. In an effort to gain more understanding of yellow perch endocrinology, real-time quantitative PCR (qPCR) was used to measure pituitary, liver...

  7. Impact of different colours of artificial light at night on melatonin rhythm and gene expression of gonadotropins in European perch.

    PubMed

    Brüning, Anika; Hölker, Franz; Franke, Steffen; Kleiner, Wibke; Kloas, Werner

    2016-02-01

    The distribution and intensity of artificial light at night, commonly referred to as light pollution, is consequently rising and progressively also ecological implications come to light. Low intensity light is known to suppress nocturnal melatonin production in several fish species. This study aims to examine the least suppressive light colour for melatonin excreted into the holding water and the influence of different light qualities and quantities in the night on gene expression of gonadotropins in fish. European perch (Perca fluviatilis) were exposed to light of different wavelengths during the night (blue, green, and red). Melatonin concentrations were measured from water samples every 3h during a 24h period. Gene expression of gonadotropins was measured in perch exposed to different light colours and was additionally examined for perch subjected to different intensities of white light (0 lx, 1 lx, 10 lx, 100 lx) during the night. All different light colours caused a significant drop of melatonin concentration; however, blue light was least suppressive. Gene expression of gonadotropins was not influenced by nocturnal light of different light colours, but in female perch gonadotropin expression was significantly reduced by white light already at the lowest level (1 lx). We conclude that artificial light with shorter wavelengths at night is less effective in disturbing biological rhythms of perch than longer wavelengths, coinciding with the light situation in freshwater habitats inhabited by perch. Different light colours in the night showed no significant effect on gonadotropin expression, but white light in the night can disturb reproductive traits already at very low light intensities. These findings indicate that light pollution has not only the potential to disturb the melatonin cycle but also the reproductive rhythm and may therefore have implications on whole species communities. PMID:26584071

  8. Genetic divergence and phylogeographic relationships among european perch (Perca fluviatilis) populations reflect glacial refugia and postglacial colonization.

    PubMed

    Nesbø, C L; Fossheim, T; Vollestad, L A; Jakobsen, K S

    1999-09-01

    We used the widely distributed freshwater fish, perch (Perca fluviatilis), to investigate the postglacial colonization routes of freshwater fishes in Europe. Genetic variability within and among drainages was assessed using mitochondrial DNA (mtDNA) D-loop sequencing and RAPD markers from 55 populations all over Europe as well as one Siberian population. High level of structuring for both markers was observed among drainages and regions, while little differentiation was seen within drainages and regions. Phylogeographic relationships among European perch were determined from the distribution of 35 mtDNA haplotypes detected in the samples. In addition to a distinct southern European group, which includes a Greek and a southern Danubian population, three major groups of perch are observed: the western European drainages, the eastern European drainages including the Siberian population, and Norwegian populations from northern Norway, and western side of Oslofjord. Our data suggest that present perch populations in western and northern Europe were colonized from three main refugia, located in southeastern, northeastern and western Europe. In support of this, nested cladistic analysis of mtDNA clade and nested clade distances suggested historical range expansion as the main factor determining geographical distribution of haplotypes. The Baltic Sea has been colonized from all three refugia, and northeastern Europe harbours descendants from both eastern European refugia. In the upper part of the Danube lineages from the western European and the southern European refugia meet. The southern European refugium probably did not contribute to the recolonization of other western and northern European drainages after the last glaciation. However, phylogenetic analyses suggest that the southern European mtDNA lineage is the most ancient, and therefore likely to be the founder of all present perch lineages. The colonization routes used by perch probably also apply to other

  9. Anisakid nematodes in beaked redfish (Sebastes mentella) from three fishing grounds in the North Atlantic, with special notes on distribution in the fish musculature.

    PubMed

    Klapper, Regina; Kuhn, Thomas; Münster, Julian; Levsen, Arne; Karl, Horst; Klimpel, Sven

    2015-01-15

    Parasitic anisakid nematodes commonly occur in the musculature and visceral organs of many fish species from the North Atlantic. In this respect, the presence of the third stage larvae of Anisakis spp. in the fish musculature may pose a potential consumer hazard due to the parasite's ability to cause anisakidosis. Thus, knowledge on the occurrence and distribution of these potentially zoonotic parasites in the commercially important North Atlantic fish species is crucial in order to evaluate and consequently prevent human infections. In the present study, 300 Sebastes mentella from three North Atlantic fishing grounds (Northern North Sea: Tampen; Barents Sea: off Bear Island; Irminger Sea: off SE Greenland) were examined for anisakid nematodes, with emphasis on occurrence and distribution in the musculature. Overall larval prevalence and mean intensity were significantly higher in redfish from Tampen (94%; 13.5±20.0) and Bear Island (94%; 14.5±19.4) than in fish from SE Greenland (75%; 6.0±5.8; p<0.01). The same trend was observed for larval infection in the musculature showing prevalence and mean intensities of 79%, 73%, and 55%, and 5.9±6.6, 5.8±6.5, and 3.2±2.4, in the musculature of redfish from Tampen, Bear Island, and Greenland, respectively. Conventional microscopy and rDNA ITS-gene sequencing of various subsamples of muscle-dwelling nematode larvae of redfish from every catching locality revealed the presence of two anisakid species; Anisakis simplex sensu stricto and the non-zoonotic Hysterothylacium aduncum. Since the larvae of H. aduncum typically occur in or on the viscera of fish, our findings of two specimens in the belly flaps of redfish were unusual. Additionally, more than 92% of the muscle-dwelling larvae occurred in the belly flaps, i.e. the hypaxial part of the musculature surrounding the visceral organs on either fish side. Thus, trimming the fillets of beaked redfish by removal of most of the belly flaps would significantly reduce the

  10. Methods to assess impacts on Hudson River white perch: report for the period October 1, 1978 to September 30, 1979. [Entrainment

    SciTech Connect

    Barnthouse, L.W.; Kirk, B.L.; Kumar, K.D.; Van Winkle, W.; Vaughan, D.S.

    1980-06-01

    This report is a brief description of the work done on the NRC project entitled 'Methods to Assess Impacts on Hudson River White Perch' October 1, 1978 to September 30, 1979. Accounts of special studies of white perch entrainment at Hudson River power plants, of density-dependent growth in the Hudson River white perch population, and of data on the white perch populations of the Delaware and Chesapeake systems were performed. Complete accounts of these special studies are included in this report. During this period, a final draft topical report entitled 'Evaluation of Impingement Losses of White Perch at the Indian Point Nuclear Station and Other Hudson River Power Plants' (NUREG/CR-1100) was completed.

  11. Approaches to the simulation of unconfined flow and perched groundwater flow in MODFLOW

    USGS Publications Warehouse

    Bedekar, Vivek; Niswonger, Richard G.; Kipp, Kenneth; Panday, Sorab; Tonkin, Matthew

    2012-01-01

    Various approaches have been proposed to manage the nonlinearities associated with the unconfined flow equation and to simulate perched groundwater conditions using the MODFLOW family of codes. The approaches comprise a variety of numerical techniques to prevent dry cells from becoming inactive and to achieve a stable solution focused on formulations of the unconfined, partially-saturated, groundwater flow equation. Keeping dry cells active avoids a discontinuous head solution which in turn improves the effectiveness of parameter estimation software that relies on continuous derivatives. Most approaches implement an upstream weighting of intercell conductance and Newton-Raphson linearization to obtain robust convergence. In this study, several published approaches were implemented in a stepwise manner into MODFLOW for comparative analysis. First, a comparative analysis of the methods is presented using synthetic examples that create convergence issues or difficulty in handling perched conditions with the more common dry-cell simulation capabilities of MODFLOW. Next, a field-scale three-dimensional simulation is presented to examine the stability and performance of the discussed approaches in larger, practical, simulation settings.

  12. Methylmercury content of eggs in yellow perch related to maternal exposure in four Wisconsin lakes

    SciTech Connect

    Hammerschmidt, C.R.; Frazier, B.E.; Rada, R.G.; Wiener, J.G.

    1999-04-01

    The authors examined the influence of maternal mercury and selected lacustrine variables on the mercury content of eggs from yellow perch (Perca flavescens). Total mercury, methylmercury, and inorganic mercury were determined in eggs and carcasses (less eggs) from three seepage lakes with a pH range of 6.1--7.0 and a fourth lake in which pH was experimentally increased from 5.5 to 6.8 by addition of alkaline groundwater. The concentration of total mercury in eggs was strongly correlated with that in the material carcass. Concentrations and burdens of mercury in eggs and carcasses were inversely correlated with lake water pH, acid-neutralizing capacity, calcium, and dissolved organic carbon. In eggs containing more than 30 ng/g dry weight of total mercury, methylmercury averaged 91% of total mercury and ranged from 85% to 96%. Mean burdens of total mercury in individual eggs varied greatly among lakes and the egg mass averaged 1.9% of the whole-body burden. The authors conclude that exposure of the developing yellow perch embryo to methylmercury is strongly affected by maternal bioaccumulation, which can vary substantially among and within lakes; however, the toxicological significance of the observed exposure of embryos to methylmercury is unclear.

  13. A Red-Tailed Hawk perches on a stump at KSC.

    NASA Technical Reports Server (NTRS)

    2000-01-01

    Near a road at Kennedy Space Center, a red-tailed hawk perches on a weathered tree stump. The red-tailed hawk has a stocky build and broad, rounded wings. Its broad range covers Alaska and Nova Scotia south to Panama. It can frequently be seen perched in a tree at the edge of a meadow, watching for movement in the grass below. It feeds mainly on small rodents. The Refuge encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects. Kennedy Space Center shares a boundary with the Merritt Island National Wildlife Refuge, encompassing 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects.

  14. Approaches to the simulation of unconfined flow and perched groundwater flow in MODFLOW.

    PubMed

    Bedekar, Vivek; Niswonger, Richard G; Kipp, Kenneth; Panday, Sorab; Tonkin, Matthew

    2012-01-01

    Various approaches have been proposed to manage the nonlinearities associated with the unconfined flow equation and to simulate perched groundwater conditions using the MODFLOW family of codes. The approaches comprise a variety of numerical techniques to prevent dry cells from becoming inactive and to achieve a stable solution focused on formulations of the unconfined, partially-saturated, groundwater flow equation. Keeping dry cells active avoids a discontinuous head solution which in turn improves the effectiveness of parameter estimation software that relies on continuous derivatives. Most approaches implement an upstream weighting of intercell conductance and Newton-Raphson linearization to obtain robust convergence. In this study, several published approaches were implemented in a stepwise manner into MODFLOW for comparative analysis. First, a comparative analysis of the methods is presented using synthetic examples that create convergence issues or difficulty in handling perched conditions with the more common dry-cell simulation capabilities of MODFLOW. Next, a field-scale three-dimensional simulation is presented to examine the stability and performance of the discussed approaches in larger, practical, simulation settings. PMID:21635246

  15. Improved Low-Order Models of Bio-inspired Pitching and Perching

    NASA Astrophysics Data System (ADS)

    Wang, Chengjie; Eldredge, Jeff D.

    2011-11-01

    To study the flying of small creatures, their simplest flapping motions, pitching and perching, are investigated by low-order inviscid point vortex models. These motions induce coherent vortex shedding at the leading edge, which has a profound influence on the generated force. Instead of fully recovering the flow field around wing, the reduced models track only small number of discrete vortices with time-varying strength to account for the unsteady aerodynamics. The idea of impulse matching is introduced to develop the new governing equation, different from the previously-developed Brown-Michael equation. For both pitching and perching motions, the results from the impulse matching model are compared with high fidelity simulations under different pitching rate and axis position, and this comparison shows a good qualitative agreement, which is better than obtained with the Brown-Michael approach. The results are also compared with previous experiments conducted in a water tunnel, and good qualitative agreement is achieved. Further, some detailed analysis of the high fidelity simulation has been performed to get intuition about the leading edge vortex, which can help us in improving the low-order model.

  16. Low-order Modeling of Bio-inspired Pitching and Perching at Low Reynolds Number

    NASA Astrophysics Data System (ADS)

    Wang, Chengjie; Eldredge, Jeff D.

    2010-11-01

    A low-order inviscid point vortex model is used to simulate the pitching and perching motion of a thin flat plate at low Reynolds number. These motions induce coherent vortex shedding at the leading edge, which has a profound influence on the generated force. The low-order method is based on the inviscid Brown-Michael point vortex model, which accounts for the unsteady aerodynamics by tracking a small number of vortices with time-varying strengths. For the pitching motion, the results from the low-order model are compared with high fidelity simulations under different pitching rate and axis position, and this comparison shows a good qualitative agreement. The perching motion is characterized by larger rotations and an unsteady translation. The low-order model results are compared with previous experiments conducted in a water tunnel, and good qualitative agreement is achieved. To investigate the mechanism of force generation, the force obtained from the model is decomposed into inertial reaction and circulatory components, and their relative contributions are inspected.

  17. Numerical modelling of vertically extensive groundwater bodies in Maui, Hawaii: An alternative to perched aquifers

    USGS Publications Warehouse

    Gingerich, S.B.

    1998-01-01

    Groundwater in East Maui, Hawaii is traditionally described as a series of discrete aquifers perched on low-permeability units underlain by a basal lens with heads of about 2-3 m. An alternative concept, a fully saturated aquifer to as much as 1400 m elevation, was investigated using a numerical model with various horizontal hydraulic conductivity values and anisotropy ratios. Results indicate that horizontal hydraulic conductivity values between about 0.08 and 1.0 m per day and anisotropy ratios between 1:1 and 100:1 will produce simulated water tables that match observed water tables at 400-1400 m elevation. These values of hydraulic conductivity are consistent with available field data for hydraulic conductivity.Groundwater in East Maui, Hawaii is traditionally described as a series of discrete aquifers perched on low-permeability units underlain by a basal lens with heads of about 2-3 m. An alternative concept, a fully saturated aquifer to as much as 1400 m elevation, was investigated using a numerical model with various horizontal hydraulic conductivity values and anisotropy ratios. Results indicate that horizontal hydraulic conductivity values between about 0.08 and 1.0 m per day and anisotropy ratios between 1:1 and 100:1 will produce simulated water tables that match observed water tables at 400-1400 m elevation. These values of hydraulic conductivity are consistent with available field data for hydraulic conductivity.

  18. Comparison of two different methods in the cryopreservation of Eurasian perch (Perca fluviatilis) sperm.

    PubMed

    Bernáth, G; Bokor, Z; Kása, E; Várkonyi, L; Hegyi, Á; Kollár, T; Urbányi, B; Żarski, D; Radóczi Ifj, J; Horváth, Á

    2015-02-01

    Two different cryopreservation methods were compared and an optimal dilution ratio for the use of controlled-rate freezer (CRF) was established for Eurasian perch (Perca fluviatilis) sperm. Progressive motility (72 ± 15%) and curvilinear velocity (VCL, 146 ± 11 μm/s) of sperm cryopreserved with CRF did not reduce significantly compared to fresh sperm [progressive motility (90 ± 4%), VCL (173 ± 24 μm/s)]. On the other hand, progressive motility (62 ± 15%) and VCL (120 ± 21 μm/s) of sperm cryopreserved with the conventional floating frame technique were significantly lower when compared to the fresh control. Sperm in both cryopreserved groups showed significantly higher straightness [STR, CRF (84 ± 4%), frame (84 ± 2%)] than in the fresh control group (68 ± 4%). Perch sperm cryopreserved with CRF at a dilution ratio of 1:20 showed significantly higher progressive motility (49 ± 6%) than at a ratio of 1:5 (39 ± 6%) and showed significantly higher VCL (129 ± 11 μm/s) than at dilution ratios of 1:10 (112 ± 17 μm/s) and 1:5 (115 ± 9 μm/s). PMID:25533132

  19. Extensive length variation in the ribosomal DNA intergenic spacer of yellow perch (Perca flavescens).

    PubMed

    Kakou, Bidénam; Angers, Bernard; Glémet, Hélène

    2016-03-01

    The intergenic spacer (IGS) is located between ribosomal RNA (rRNA) gene copies. Within the IGS, regulatory elements for rRNA gene transcription are found, as well as a varying number of other repetitive elements that are at the root of IGS length heterogeneity. This heterogeneity has been shown to have a functional significance through its effect on growth rate. Here, we present the structural organization of yellow perch (Perca flavescens) IGS based on its entire sequence, as well as the IGS length variation within a natural population. Yellow perch IGS structure has four discrete regions containing tandem repeat elements. For three of these regions, no specific length class was detected as allele size was seemingly normally distributed. However, for one repeat region, PCR amplification uncovered the presence of two distinctive IGS variants representing a length difference of 1116 bp. This repeat region was also devoid of any CpG sites despite a high GC content. Balanced selection may be holding the alleles in the population and would account for the high diversity of length variants observed for adjacent regions. Our study is an important precursor for further work aiming to assess the role of IGS length variation in influencing growth rate in fish. PMID:26841134

  20. Mechanical analysis of avian feet: multiarticular muscles in grasping and perching

    PubMed Central

    Backus, Spencer B.; Sustaita, Diego; Odhner, Lael U.; Dollar, Aaron M.

    2015-01-01

    The grasping capability of birds' feet is a hallmark of their evolution, but the mechanics of avian foot function are not well understood. Two evolutionary trends that contribute to the mechanical complexity of the avian foot are the variation in the relative lengths of the phalanges and the subdivision and variation of the digital flexor musculature observed among taxa. We modelled the grasping behaviour of a simplified bird foot in response to the downward and upward forces imparted by carrying and perching tasks, respectively. Specifically, we compared the performance of various foot geometries performing these tasks when actuated by distally inserted flexors only, versus by both distally inserted and proximally inserted flexors. Our analysis demonstrates that most species possess relative phalanx lengths that are conducive to grasps actuated only by a single distally inserted tendon per digit. Furthermore, proximally inserted flexors are often required during perching, but the distally inserted flexors are sufficient when grasping and carrying objects. These results are reflected in differences in the relative development of proximally and distally inserted digital flexor musculature among ‘perching’ and ‘grasping’ taxa. Thus, our results shed light on the relative roles of variation in phalanx length and digit flexor muscle distribution in an integrative, mechanical context. PMID:26064598

  1. Methylmercury content of eggs in yellow perch related to maternal exposure in four Wisconsin lakes

    USGS Publications Warehouse

    Hammerschmidt, Chad R.; Wiener, James G.; Frazier, Brdaley E.; Rada, Ronald G.

    1999-01-01

    We examined the influence of maternal mercury and selected lacustrine variables on the mercury content of eggs from yellow perch (Perca flavescens). Total mercury, methylmercury, and inorganic mercury were determined in eggs and carcasses (less eggs) from three seepage lakes with a pH range of 6.1a??7.0 and a fourth lake in which pH was experimentally increased from 5.5 to 6.8 by addition of alkaline groundwater. The concentration of total mercury in eggs was strongly correlated with that in the maternal carcass. Concentrations and burdens of mercury in eggs and carcasses were inversely correlated with lake water pH, acid-neutralizing capacity, calcium, and dissolved organic carbon. In eggs containing more than 30 ng/g dry weight (4.5 ng/g wet weight) of total mercury, methylmercury averaged 91% of total mercury and ranged from 85% to 96%. Mean burdens of total mercury in individual eggs varied greatly among lakes (range, 2.3a??63 pg), and the egg mass averaged 1.9% of the whole-body burden. We conclude that exposure of the developing yellow perch embryo to methylmercury is strongly affected by maternal bioaccumulation, which can vary substantially among and within lakes; however, the toxicological significance of the observed exposure of embryos to methylmercury is unclear.

  2. Perching but not foraging networks predict the spread of novel foraging skills in starlings.

    PubMed

    Boogert, Neeltje J; Nightingale, Glenna F; Hoppitt, William; Laland, Kevin N

    2014-11-01

    The directed social learning hypothesis suggests that information does not spread evenly through animal groups, but rather individual characteristics and patterns of physical proximity guide the social transmission of information along specific pathways. Network-based diffusion analysis (NBDA) allows researchers to test whether information spreads following a social network. However, the explanatory power of different social networks has rarely been compared, and current models do not easily accommodate random effects (e.g. allowing for individuals within groups to correlate in their asocial solving rates). We tested whether the spread of two novel foraging skills through captive starling groups was affected by individual- and group-level random and fixed effects (i.e. sex, age, body condition, dominance rank and demonstrator status) and perching or foraging networks. We extended NBDA to include random effects and conducted model discrimination in a Bayesian context. We found that social learning increased the rate at which birds acquired the novel foraging task solutions by 6.67 times, and acquiring one of the two novel foraging task solutions facilitated the asocial acquisition of the other. Surprisingly, the spread of task solutions followed the perching rather than the foraging social network. Upon acquiring a task solution, foraging performance was facilitated by the presence of group mates. Our results highlight the importance of considering more than one social network when predicting the spread of information through animal groups. This article is part of a Special Issue entitled: Cognition in the wild. PMID:25178191

  3. GROWTH AND SURVIVAL OF CHANNEL CATFISH AND YELLOW PERCH EXPOSED TO LOWERED CONSTANT AND DIURNALLY FLUCTUATING DISSOLVED OXYGEN CONCENTRATIONS

    EPA Science Inventory

    Growth and survival were determined for duplicate lots of juvenile channel catfish (Ictalurus punctatus) and yellow perch (Perca flavescens) exposed for 69 and 67 days, respectively, to nearly constant dissolved oxygen (DO) concentrations at near air saturation (control), 6.5, 5....

  4. IMPACT OF A ONCE-THROUGH COOLING SYSTEM ON THE YELLOW PERCH STOCK IN THE WESTERN BASIN OF LAKE ERIE

    EPA Science Inventory

    The surplus production model, a conventional fishery stock assessment model, is applied to assess the entrainment and impingement impact of the Monroe Power Plant on the yellow perch standing stock and fishery in the western basin in Lake Erie. Biological parameters of the model ...

  5. TEMPERATURES SELECTED IN A POWER PLANT THERMAL EFFLUENT BY ADULT YELLOW PERCH 'PERCA FLAVESCENS' IN WINTER (JOURNAL VERSION)

    EPA Science Inventory

    Winter-temperature selecton by yellow perch (Perca flavescens) was monitored by radio telemtry near the thermal discharge from a power plant on the Upper Mississippi River. Ten fish were equipped with temperature-sensing radio transmitters. Temperature selection was monitored wit...

  6. Evolutionary change driven by metal exposure as revealed by coding SNP genome scan in wild yellow perch (Perca flavescens).

    PubMed

    Bélanger-Deschênes, Sébastien; Couture, Patrice; Campbell, Peter G C; Bernatchez, Louis

    2013-07-01

    Pollution can drive rapid evolutionary change in wild populations. This study targets functional polymorphisms of chronically metal-contaminated wild yellow perch (Perca flavescens). A de novo transcriptome scan contrasted subsets of individuals from clean (n = 16) and contaminated (n = 16) lakes to identify 87 candidate annotated coding SNPs. Candidate genotypes and liver [metal] were obtained in 10 populations (n = 1,052) and a genome scan distinguished outliers: one nuclear (cyclin G1 gene) and two mitochondrial (cytochrome b and NADH dehydrogenase subunit 2 genes) also displaying allelic correlation to mean population [cadmium]. Whole mtDNA and 17 kb surrounding cyclin G1 were characterised through 454 sequencing thus revealing two non-synonymous substitutions involving dissimilar amino acids. Based on associated functions and inter-population differentiation, contaminated perch may have been selected for fast life cycle completion (p53 pathway) and memorization impairment mitigation (long-term potentiation pathway). In accordance with predicted evolutionary trajectory for stressed and energy deprived organisms, adapted perch would not compensate for repair mechanism inhibition, instead reallocating energy towards growth and favouring inexpensive impairment mitigation adaptations over costly detoxification. Overall, 85 years of selection could have driven rapid, potentially adaptive evolution by selecting alleles increasing perch fitness in polluted environments. PMID:23722603

  7. Effect of gear selectivity on recommended allowable harvest with application to the Lake Erie yellow perch fishery

    USGS Publications Warehouse

    Madenjian, Charles P.; Ryan, Philip A.

    1995-01-01

    Because the 57-mm-mesh gill net is the predominant gear in the Lake Eric fishery for yellow perch Perca flavescens, gear selectivity is an important factor operating in that fishery. The selectivity curve for age-groups 2–6 is roughly symmetrical with peak vulnerability at age 4; younger and older perch are substantially less susceptible to the gear. The Beverton-Holt yield-per-recruit and Ricker equilibrium yield models were applied to the west-central Lake Erie yellow perch fishery to examine the effect of gear selectivity on yield-per-recruit analysis. All fish older than a specified recruitment age are assumed to he equally vulnerable in the Beverton-Holt yield-per-recruit analysis, but the Ricker equilibrium yield model can explicitly accommodate gear selectivity. Optimal fishing rate was estimated with both models, and then recommended allowable harvests were generated based on yellow perch population size estimates. Inclusion of gear selectivity in the yield-per-recruit analysis resulted in a 12% decrease in recommended allowable harvest. When skewed gear selectivity curves were investigated, gear selectivity had a still more pronounced effect on recommended allowable harvest.

  8. Host-parasite relationships as determinants of heavy metal concentrations in perch (Perca fluviatilis) and its intestinal parasite infection.

    PubMed

    Brázová, Tímea; Hanzelová, Vladimíra; Miklisová, Dana; Šalamún, Peter; Vidal-Martínez, Víctor M

    2015-12-01

    The concentrations of As, Cd, Cr, Cu, Hg, Mn, Ni, Pb, and Zn and their bioconcentration factors (BCFs) were determined in two intestinal parasites, an acanthocephalan, Acanthocephalus lucii, a tapeworm, Proteocephalus percae, present in the same host, the European perch (Perca fluviatilis, L.), in the heavily polluted Ružín reservoir in eastern Slovakia. The bioaccumulation of heavy metals in the fish organs and parasites was studied for acanthocephalan and tapeworm monoinfections or mixed infections by the two parasites and for the size of their parasitic infrapopulations. Bioconcentration factors (c[parasite]/c[muscle tissue]) showed that the concentrations of As, Ni, Pb and Zn were higher in mixed infections than in monoinfections. Negative correlations between heavy metal concentrations in perch organs and the parasites were found. For example, higher concentrations of Ni and Zn in both parasite species corresponded with lower metal concentrations in perch and hard roe. Likewise, significant negative relationships between metal concentrations in fish organs and number of parasites were noticed with lower levels of Pb in fish harbouring higher numbers of tapeworms. Similarly, in both parasite species the concentrations of some essential elements (Cr, Mn) were lower at high infection intensities compared to low intensities. Our study revealed that the differential concentration of heavy metals in perch organs was affected by the type of infection (mono- or mixed-infection), and needs to be considered in field ecotoxicological and parasitological studies as a potentially important factor influencing the pollutant concentrations in fish. PMID:26432028

  9. Influence of mineral supplementation on growth in yellow perch Perca flavescens fed a soy-based diet

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known of the nutritional requirements for the growth of yellow perch in intensive aquaculture. Consequently, commercial feed formulations are based on nutritional requirements for rainbow trout, containing large quantities of fish meal and oil which are not optimal for other species. Plant...

  10. LETHAL AND SUBLETHAL EXPOSURE AND RECOVERY EFFECTS OF OZONE-PRODUCED OXIDANTS ON ADULT WHITE PERCH (MORONE AMERICANA GMELIN)

    EPA Science Inventory

    Adult white perch (Morone americana), acclimated to 15C, were exposed to a series of ozone-produced oxidant (OPO) concentrations for 96 h using continuous flow bioassay techniques. Toxicity were analyzed using both responses surface modeling and standard probit regression. White ...

  11. Genetic Variation of 17 Wild Yellow Perch Populations from the Midwest and East Coast Analyzed Via Microsatellites

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We used microsatellite loci, including seven newly developed by us, to analyze the population genetic structure of wild yellow perch Perca flavescens from 17 sampling areas in the Upper Midwest and East Coast of the United States. Our results revealed greater genetic differentiation and finer-scale ...

  12. The Effects of Extrusion Processing of Distillers Dried Grains with Solubles (DDGS)-Based Yellow Perch (Perca flavescens) Feeds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study was conducted to investigate the production of balanced diets for juvenile yellow perch (Perca flavescens) feeds. Six isocaloric (3.20 kcal/g), isonitrogenous (31.5% db) ingredient blends were formulated with 0, 10, 20, 30, 40 and 50% distillers dried grains with solubles (DDGS) at a feed...

  13. Identification of gender in yellow perch by external morphology: validation in four geographic strains and effects of estradiol

    Technology Transfer Automated Retrieval System (TEKTRAN)

    External morphological criteria that enable the rapid determination of gender have been developed for yellow perch (Perca flavescens). Criteria are based upon 1) shape of the urogenital papilla (UGP), 2) relative size of the UGP to the anal (AN) opening, and 3) coloration of the UGP. In females, t...

  14. IMPACT OF A ONCE THROUGH COOLING SYSTEM ON THE YELLOW PERCH STOCK IN THE WESTERN BASIN OF LAKE ERIE

    EPA Science Inventory

    Conventional stock assessment models have been applied to determine the impact of entrainment and impingement at the Monroe Power Plant on the yellow perch stock of the western basin of Lake Erie. First the surplus production model was applied. Biological parameters of the model ...

  15. Composition and Use of Common Carp Meal as a Marine Fish Meal Replacement in Yellow Perch Diets

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We evaluated the use of fish meal derived from a locally abundant, non-native fish species – common carp Cyprinus carpio – with the objective of offsetting the cost of marine fish meal (MFM, ~$1,200/ton) in yellow perch Perca flavescens feed. Biochemical analyses of meals showed that crude protein a...

  16. Twin screw extrusion processing of distillers dried grains with solubles (DDGS)-based Yellow Perch (Perca flavescens) feeds

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Increases in global aquaculture production, compounded with limited availabilities of fish meal for fish feed, has created the need for alternative protein sources. Twin-screw extrusion studies were performed to investigate the production of nutritionally-balanced feeds for juvenile yellow perch (Pe...

  17. Use of Diets Containing Graded Levels of Distillers Dried Grains with Solubles and Soybean Meal by Yellow Perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A feeding trial was performed to investigate inclusion levels of distillers dried grains with solubles (DDGS) and soybean meal (SM) used in the diets of juvenile yellow perch (Perca flavescens). Six isocaloric (3.22 ± 0.02 kcal/g SE), isonitrogenous (30.1 ± 0.2% SE) experimental diets were formulate...

  18. The influence of providing perches and string on activity levels, fearfulness and leg health in commercial broiler chickens.

    PubMed

    Bailie, C L; O'Connell, N E

    2015-04-01

    The aim of this study was to assess the effect of providing environmental enrichment in the form of perches and string on the behaviour and welfare of commercial broiler chickens. Houses containing ~23 000 broiler chickens were assigned to one of four treatments in a 2×2 factorial design. Treatments involved two levels of access to perches (P) (present (24/house) '+P' or absent '-P') and two levels of access to string (S) (present (24/house) '+S' or absent '-S'). All houses contained windows, and 30 straw bales were provided from day 10 of the rearing cycle. Treatments were applied in one of four houses on a single farm, and were replicated over four production cycles. Behaviour and leg health were observed in weeks 3 to 5 of the rearing cycle. Production performance and environmental parameters were also measured. There was an interaction between perches and age in the percentage of birds observed lying, with higher percentages of birds observed lying in the +P treatment than in the -P treatment during weeks 4 and 5. There was also a significant interaction between string and age in the percentage of birds observed in locomotion, with higher percentages observed in locomotion in the -S treatment than in the +S treatment during weeks 4 and 5. There was also an interaction between string and age in average gait scores, with lower gait scores in the +S treatment than in the -S treatment during weeks 3 and 5 but not within week 4. Daytime observations showed that perches and strings were used frequently, with one bout of perching occurring approximately every 80 s/perch, and one bout of pecking at string occurring every 78 s/string on average. There was a significant effect of age on use of perches (P<0.001) and string (P<0.001), with perching peaking during week 5 and string pecking peaking during week 3. We conclude that commercial broilers in windowed houses with access to straw bales display an interest in additional enrichment stimuli in the form of perches and

  19. 78 FR 44465 - Fisheries of the Exclusive Economic Zone Off Alaska; Pacific Ocean Perch in the West Yakutat...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-07-24

    ... (78 FR 13162, February 26, 2013). In accordance with Sec. 679.20(d)(1)(i), the Administrator, Alaska... fishery. The Acting Assistant Administrator for Fisheries, NOAA (AA), finds good cause to waive the..., 2013. The AA also finds good cause to waive the 30-day delay in the effective date of this action...

  20. Old moms with new tricks: modeling the effects of age-specific spawning behaviors in Pacific Ocean perch

    EPA Science Inventory

    In commercially exploited, long-lived fish species, age structure plays an important role in determining population stability and resilience to human and environmental impacts. The often observed increase in energy allocation per offspring by older females can improve larval surv...

  1. Identifying across-system sources of variation in a generalist freshwater fish: Correlates of total and size-specific abundance of yellow perch

    USGS Publications Warehouse

    Carey, M.P.; Mather, M. E.

    2009-01-01

    Variation in fish abundance across systems presents a challenge to our understanding of fish populations because it limits our ability to predict and transfer basic ecological principles to applied problems. Yellow perch (Perca flavescens) is an ideal species for exploring environmental and biotic correlates across system because it is widely distributed and physiologically tolerant. In 16 small, adjacent systems that span a wide range of environmental and biotic conditions, yellow perch were sampled with a standard suite of gear. Water quality, morphometry, vegetation, invertebrates and fish communities were concurrently measured. Multimodel inference was used to prioritise regressors for the entire yellow perch sample and three size groups (35-80, 81-180, ???181 mm TL). Across systems, pH and fish richness were identified as the key drivers of yellow perch abundance. At very low pH (4.8) had many other species and few yellow perch. Similar patterns for pH and fish community were observed for the two largest-size classes. Negative interactions were observed between the medium- and large-sized yellow perch and between the largest and smallest yellow perch, although interspecific interactions were weaker than expected. This examination of variability for an indicator species and its component-size classes provides ecological understanding that can help frame the larger-scale sampling programs needed for the conservation of freshwater fish. ?? 2008 Blackwell Munksgaard.

  2. Individuals' diet diversity influences gut microbial diversity in two freshwater fish (threespine stickleback and Eurasian perch)

    PubMed Central

    Bolnick, Daniel I; Snowberg, Lisa K; Hirsch, Philipp E; Lauber, Christian L; Knight, Rob; Caporaso, J Gregory; Svanbäck, Richard; Post, David

    2014-01-01

    Vertebrates' diets profoundly influence the composition of symbiotic gut microbial communities. Studies documenting diet-microbiota associations typically focus on univariate or categorical diet variables. However, in nature individuals often consume diverse combinations of foods. If diet components act independently, each providing distinct microbial colonists or nutrients, we expect a positive relationship between diet diversity and microbial diversity. We tested this prediction within each of two fish species (stickleback and perch), in which individuals vary in their propensity to eat littoral or pelagic invertebrates or mixtures of both prey. Unexpectedly, in most cases individuals with more generalised diets had less diverse microbiota than dietary specialists, in both natural and laboratory populations. This negative association between diet diversity and microbial diversity was small but significant, and most apparent after accounting for complex interactions between sex, size and diet. Our results suggest that multiple diet components can interact non-additively to influence gut microbial diversity. PMID:24847735

  3. A new species of Leptorhynchoides Kostyler 1924 (Acanthocephala) from the pirate perch, Aphredoderus sayanus (Gilliams).

    PubMed

    Buckner, R L; Buckner, S C

    1976-12-01

    Leptorhynchoides aphredoderi sp. n. is described from specimens recovered from pirate perch, Aphredoderus sayanus, collected in southeastern Louisiana. The new species is distinguished by having more longitudinal rows of proboscis hooks (15 to 18) than any other species of Leptorhynchoides. It differs additionally from L. thecatus and L. plagicephalus in having a shorter trunk, proboscis, proboscis receptacle, and proboscis hooks. Eggs of the new species are much larger than those of L. thecatus. L. aphredoderi differs further from L. plagicephalus in having fewer proboscis hooks in each longitudinal row and wider eggs. L. aphredoderi differs additionally from L. campbelli in having more proboscis hooks in each longitudinal row and much longer eggs. PMID:1003286

  4. Perching mate-locating strategy in Paysandisia archon (Lepidoptera: Castniidae): behavioral and morpho-physiological investigations.

    PubMed

    Riolo, P; Verdolini, E; Anfora, G; Minuz, R L; Ruschioni, S; Carlin, S; Isidoro, N

    2014-06-01

    We studied Paysandisia archon (Burmeister) (Lepidoptera: Castniidae: Castniinae) courtship behavior to provide a detailed qualitative and quantitative description of male and female behaviors. Moreover, to investigate the role of antennal olfaction and visual stimuli in mate-recognition, bioassays with antennectomized adults and dummies were performed. To assess the presence of a pheromone gland in the ovipositor, morphological (using light and scanning electron microscopic techniques), electrophysiological, and chemical investigations were carried out. We observed perching mate-locating behavior of P. archon males, with the female triggering the courtship sequence by approaching the perching male first. The stereotyped courtship sequence is made up of five main steps: female flight, pair flight, alighting close, copulation attempt, and clasping. Our findings suggest that visual cues are important in P. archon courtship behavior, and the role of chemical cues is also discussed. Moreover, we observed a higher antenna cleaning frequency in females than in males. Ovipositor extrusions during courtship appeared not to be related to calling behavior, and histological investigations showed no evidence of glandular tissues involved in sex pheromone production. The P. archon ovipositor consists of the eighth uromere, which forms the ovipositor base, and the 9th and 10th uromeres are fused together and connected to the base by an intersegmental membrane. Overall, 24 compounds were identified from extracts obtained from ovipositors: 9 compounds were detected only in extracts from the ovipositors of 24-h-old virgin females, and not from those of 1-h-old females. None of these compounds elicited any significant electrophysiological responses from male antennae. PMID:25026660

  5. Identification and characterization of the melanoma differentiation - associated gene 5 in sea perch, Lateolabrax japonicus.

    PubMed

    Jia, Peng; Jia, Kuntong; Chen, Limin; Le, Yao; Jin, Yilin; Zhang, Jing; Zhu, Limei; Zhang, Li; Yi, Meisheng

    2016-08-01

    The RIG-I-like receptors family is a group of cytosolic RNA helicase proteins that can recognize viral RNA via binding to pathogen associated molecular pattern motifs within RNA ligands. A novel vertebrate RLR counterpart named LjMDA5 was firstly identified from the marine fish sea perch Lateolabrax japonicus in this study. The full-length cDNA of LjMDA5 is 3750 bp and encodes a polypeptide of 988 amino acids, containing two N-terminal tandem caspase activation and recruitment domains, a DExH (Asp-Glu-X-His) box domain, an HELICc domain, and a C-terminal domain RIG-I. Phylogenetic analysis showed that LjMDA5 shared the closest genetic relationship with the MDA5 of Larimichthys crocea. Quantitative RT-PCR analysis showed that LjMDA5 was ubiquitously expressed and up-regulated significantly in all selected tissues in vivo post NNV infection. Time course analysis showed that LjMDA5 transcripts significantly increased in spleen and kidney. We found LjMDA5 could be regulated in the sea perch LJB and LJF cell lines after lipopolysaccharide, polyinosinic-polycytidylic acid treatment and NNV challenge. RNA interference experiment indicated that silencing of LjMDA5 significantly increased RGNNV replication and virus production in NNV infected LJF cells. Our results revealed that MDA5 was essential for host defense against NNV, which provided new insights into the function of RLR signaling pathway during NNV infection in fish. PMID:27039216

  6. Hawk Eyes II: Diurnal Raptors Differ in Head Movement Strategies When Scanning from Perches

    PubMed Central

    O'Rourke, Colleen T.; Pitlik, Todd; Hoover, Melissa; Fernández-Juricic, Esteban

    2010-01-01

    Background Relatively little is known about the degree of inter-specific variability in visual scanning strategies in species with laterally placed eyes (e.g., birds). This is relevant because many species detect prey while perching; therefore, head movement behavior may be an indicator of prey detection rate, a central parameter in foraging models. We studied head movement strategies in three diurnal raptors belonging to the Accipitridae and Falconidae families. Methodology/Principal Findings We used behavioral recording of individuals under field and captive conditions to calculate the rate of two types of head movements and the interval between consecutive head movements. Cooper's Hawks had the highest rate of regular head movements, which can facilitate tracking prey items in the visually cluttered environment they inhabit (e.g., forested habitats). On the other hand, Red-tailed Hawks showed long intervals between consecutive head movements, which is consistent with prey searching in less visually obstructed environments (e.g., open habitats) and with detecting prey movement from a distance with their central foveae. Finally, American Kestrels have the highest rates of translational head movements (vertical or frontal displacements of the head keeping the bill in the same direction), which have been associated with depth perception through motion parallax. Higher translational head movement rates may be a strategy to compensate for the reduced degree of eye movement of this species. Conclusions Cooper's Hawks, Red-tailed Hawks, and American Kestrels use both regular and translational head movements, but to different extents. We conclude that these diurnal raptors have species-specific strategies to gather visual information while perching. These strategies may optimize prey search and detection with different visual systems in habitat types with different degrees of visual obstruction. PMID:20877650

  7. Connectivity in estuarine white perch populations of Chesapeake Bay: evidence from historical fisheries data

    NASA Astrophysics Data System (ADS)

    Kraus, Richard T.; Secor, David H.

    2005-07-01

    The role of complex life cycles in patterns of estuarine habitat use can be evaluated by studying stage-specific changes in abundances between principal habitats. Here, we evaluated how two primary habitats, tidal freshwater (salinity <3) and brackish water (salinity 3-15), structured juvenile white perch ( Morone americana) abundance for eight sub-estuaries of the Chesapeake Bay. In addition, abundances of juveniles in the two primary habitats were related to indices of overall sub-estuary (population) adult abundance. Smaller sub-estuaries (e.g., Patuxent, Nanticoke, Rappahannock) showed higher juvenile abundances in brackish habitats whereas larger systems (e.g., Head of Bay, Potomac, and James) exhibited higher juvenile abundances in freshwater. Within each sub-estuary, we observed strong and positive correlations between freshwater and brackish juvenile abundances. Though adult abundance indices were poor predictors of juvenile abundance in either habitat, a significant amount of variability in adult abundance was explained by juvenile abundances in prior years for most sub-estuaries. The strength of the association varied by sub-estuary and habitat and suggested that juvenile habitats may make disproportionate contributions to the adult population, dependent upon sub-estuary. There were also significant correlations in juvenile abundance between sub-estuaries, indicating inter-annual synchrony in recruitment among populations. Within sub-estuaries, river discharge did not provide a direct indication of recruitment variability, and currently there is no clear explanation for correlation in juvenile abundances between sub-estuaries. Still, a positive association between correlations in river discharge and significant correlations in juvenile abundances supported previous hypotheses that freshwater flow may be an important factor influencing juvenile abundance, but it is likely that other environmental factors are also driving synchronous fluctuations in

  8. Watershed land use is strongly linked to PCBs in white perch in Chesapeake Bay subestuaries.

    PubMed

    King, Ryan S; Beaman, Joseph R; Whigham, Dennis F; Hines, Anson H; Baker, Matthew E; Weller, Donald E

    2004-12-15

    We related total PCBs (t-PCBs) in white perch (Morone americana), an abundant estuarine resident that supports a valuable recreational and commercial fishery in the mid-Atlantic region, to the amount and spatial arrangement of developed land in watersheds that discharge into 14 subestuaries of Chesapeake Bay. We considered the intensity of development in watersheds using four developed land-use measures (% impervious surface, % total developed land, % high-intensity residential + commercial [%high-res/comm], and % commercial) to represent potential source areas of PCBs to the subestuaries. We further evaluated the importance of source proximity by calculating three inverse-distance weighted (IDW) metrics of development, an approach that weighted developed land near the shoreline more heavily than developed land farther away. Unweighted percentages of each of the four measures of developed land explained 51-69% of the variance in t-PCBs. However, IDWs markedly improved the relationships between % developed land measures and t-PCBs. Percent commercial land, weighted by its simple inverse distance, explained 99% of the variance in t-PCBs, whereas the other three measures explained as much as 93-97%. PCBs historically produced or used in commercial and residential areas are apparently persisting in the environment atthe scale of the watersheds and subestuaries examined in this study, and developed land close to the subestuary has the greatest unit effect on t-PCBs in fish. These findings provide compelling evidence for a strikingly strong linkage between watershed land use and t-PCBs in white perch, and this relationship may prove useful for identifying unsampled subestuaries with a high risk of PCB contamination. PMID:15669311

  9. Biological half-life of radioactive cesium in Japanese rockfish Sebastes cheni contaminated by the Fukushima Daiichi nuclear power plant accident.

    PubMed

    Matsumoto, Akira; Shigeoka, Yu; Arakawa, Hisayuki; Hirakawa, Naoto; Morioka, Yoshiaki; Mizuno, Takuji

    2015-12-01

    Since the Fukushima accident in March 2011 the concentration of radioactive cesium in Japanese rockfish (Sebastes cheni) has been decreasing slower than other fish species. The aim of this study was therefore to investigate the possibility of slow elimination rate (i.e., relatively longer Tb) as one of the reasons for the slow decrease in (137)Cs concentrations in Japanese rockfish (S. cheni). To do this, we reared twenty-three individuals of this species for a period of about 1 year, during which time we measured the (137)Cs concentrations and γ-ray spectra 14 times by using a high-efficiency NaI(Tl) scintillator. We then examined the relationship between the (137)Cs concentrations and the total length of each individual. We estimated the biological half-life (Tb, day) for each individual using the total number of (137)Cs counts in the energy region, and examined the effects of total length and (137)Cs concentration on Tb by generalized linear model (GLM). We also examined the effect of sex, total length, seawater temperature, and the (137)Cs concentration of seawater on temporal changes in the (137)Cs count reduction rate by GLM. There was no clear relationship between the corrected whole-body (137)Cs concentrations and the total length in females, however there was a significant positive correlation between these two variables in males. The difference between males and females may be attributable to variation in the degree of dilution because of variable growth of individuals, and suggests that the (137)Cs concentrations of small individuals may be greatly diluted because of faster growth. However, there was no significant difference in Tb between sexes. The mean Tb (±SD) in all individuals was 269 (±39) days; this Tb value is 2.7-5.4 times longer than past Tb values (marine fish: 50-100 days), and is thought to be one of the reasons for the slower decrease in (137)Cs concentrations in this species than other fish species on the coast of Fukushima. The GLM

  10. Oceanic Observations

    NASA Technical Reports Server (NTRS)

    Busalacchi, Antonio J.

    1997-01-01

    For many years, merchant ships and the naval fleets of various countries have been the major source of data over and in the open ocean. Oceanographic research experiments and process studies in the field have also contributed to the climatological data bases for the global ocean, but, for the most part, these have been limited in duration and extent. However, over the last 10 years under the auspices of the World Climate Research Program and the International Geosphere Biosphere Program the role of the oceans in global and climate change has taken on increased significance. This has created a need for a considerably improved understanding of the seasonal, interannual, decadal and longer time-scale variability of the physical and biogeochemical attributes of the global ocean. As a result, over the past 10 years several major international field programs have been implemented and have had a tremendous impact on the number of in situ observations obtained for the global ocean. The Tropical Ocean Global Atmosphere (TOGA) program, the World Ocean Circulation Experiment (WOCE), and the Joint Global Ocean Flux Study (JGOFS) were designed with observational, modelling, and process study components aimed at analyzing different aspects of the ocean's role in the coupled climate system. In parallel with the field programs, continuous space-based observations of sea surface temperature, sea surface topography, and sea surface winds spanning nearly a decade or longer have become a reality. During this same time period, numerical ocean models and computational power have advanced to the point where the oceanographic observations, both in situ and remotely sensed, can be assimilated into numerical ocean models in order to provide a four-dimensional (x-y-z-t) depiction of the evolving state of the global ocean.

  11. Onset of a perched water table during infiltration in a gradually layered soil: Reanalysis of a laboratory experiment

    NASA Astrophysics Data System (ADS)

    Barontini, Stefano; Grottolo, Maria; Belluardo, Giorgio; Bacchi, Baldassare; Ranzi, Roberto

    2014-05-01

    Perched water tables in the upper soil layers play a key role in water partitioning during infiltration. They are typically thin and ephemeral, and onset in soils where a decrease of hydraulic conductivity and diffusivity is observed with depth. Aiming at better understanding their dynamics, we theoretically and numerically reanalysed a laboratory experiment, during which the onset of a perched water table was observed in a reconstructed soil with gradually decreasing conductivity at saturation with depth. The laboratory prototype was a prismatic column filled with 9 different 0.1 m--deep soil layers. The grain--size distribution curve and porosity of the layers were designed in order to reproduce an exponential decay of conductivity, on the basis of the application of a modified Kozeny--Carman relationship. During the experiment the soil was artificially wetted by means of a rainfall simulator at a rate previously determined in order to maintain a constant water content on the surface for 9 hours. Istantaneous volumetric water content profiles were measured by means of 9 multiplexed TDR probes. As a result of the experiment a water content peak was observed below the soil surface. Then it emphasised and moved downward until a perched water table formed at an intermediate height in the column, about 6 h after the beginning of the experiment. The thickness of the perched water table rapidly increased upward while the wetting front slowly travelled downward. The observed patterns supported phenomenological aspects enlightened by an analytical solution of transient infiltration in a gradually layered soil and by a numerical solution of similar cases. When the perched water table onset, the infiltration was quantitatively compatible with the presence of a perched water table within the soil column, on the basis of a steady infiltration theoretical framework. Then a reanalysis of the experiment was performed by numerically solving the Richards equation for a

  12. CO2-induced ocean acidification increases anxiety in Rockfish via alteration of GABAA receptor functioning

    PubMed Central

    Hamilton, Trevor James; Holcombe, Adam; Tresguerres, Martin

    2014-01-01

    The average surface pH of the ocean is dropping at a rapid rate due to the dissolution of anthropogenic CO2, raising concerns for marine life. Additionally, some coastal areas periodically experience upwelling of CO2-enriched water with reduced pH. Previous research has demonstrated ocean acidification (OA)-induced changes in behavioural and sensory systems including olfaction, which is due to altered function of neural gamma-aminobutyric acid type A (GABAA) receptors. Here, we used a camera-based tracking software system to examine whether OA-dependent changes in GABAA receptors affect anxiety in juvenile Californian rockfish (Sebastes diploproa). Anxiety was estimated using behavioural tests that measure light/dark preference (scototaxis) and proximity to an object. After one week in OA conditions projected for the next century in the California shore (1125 ± 100 µatm, pH 7.75), anxiety was significantly increased relative to controls (483 ± 40 µatm CO2, pH 8.1). The GABAA-receptor agonist muscimol, but not the antagonist gabazine, caused a significant increase in anxiety consistent with altered Cl− flux in OA-exposed fish. OA-exposed fish remained more anxious even after 7 days back in control seawater; however, they resumed their normal behaviour by day 12. These results show that OA could severely alter rockfish behaviour; however, this effect is reversible. PMID:24285203

  13. Age, growth, spawning season, and fecundity of the trout-perch (Percopsis omiscomaycus) in southeastern Lake Michigan

    USGS Publications Warehouse

    House, Robert; Wells, LaRue

    1973-01-01

    Growth of trout-perch (Percopsis omiscomaycus) in the first 2 years of life was somewhat slower in southeastern Lake Michigan (average length at end of second year, 83 mm) than in Lower Red Lake, Minnesota (90 mm), but considerably faster than in Lake Superior (58 mm); size differences in later years were slightly less pronounced. Young fish began growing earlier in the year (some before June 20) than older ones (as late as August). Females tended to live longer than males, as they do in Lower Red Lake and Lake Superior. Trout-perch spawned from late June or early July until late September, somewhat later than in Lower Red Lake (May to August) or Lake Erie (June to August). Fecundity was similar to that in Lake Erie; mature females 94-146 mm long contained from 126 to 1329 yolked eggs.

  14. Distribution and exploitation of Nile perch Lates niloticus in relation to stratification in Lake Victoria, East Africa

    USGS Publications Warehouse

    Taabu-Munyaho, A.; Kayanda, Robert J.; Everson, Inigo; Grabowski, Timothy B.; Marteinsdóttir, Gudrún

    2013-01-01

    Stratification restricts habitable areas forcing fish to balance between favourable temperature and minimum dissolved oxygen requirements. Acoustic surveys conducted during the stratified and isothermal periods on tropical Lake Victoria indicated that stratification of temperature and dissolved oxygen (DO) affected vertical distribution of Nile perch. There was higher mean temperature (25.6 ± 0.5 °C) and lower DO (6.4 ± 1.8 mg/l) during stratified period compared to the isothermal period (mean temperature 24.9 ± 0.3 °C; mean DO 7.3 ± 0.6 mg/l). Higher mean densities of Nile perch were recorded in the coastal (0.44 ± 0.03) and deep (0.27 ± 0.02 g/m3) strata during the stratified compared to the isothermal season (coastal: 0.24 ± 0.01; deep: 0.12 ± 0.02 g/m3). In addition, Nile perch density in the upper 0–40 m depth layers in the coastal and deep strata increased by over 50% from the isothermal to the stratified season. Daily landings from 65 motorised fishing boats between October 2008 and September 2010 show higher mean catch (26.29 ± 0.17 kg/boat/day) during stratified compared to the isothermal (23.59 ± 0.15) season. Thermal stratification apparently compresses the habitat available to Nile perch and can potentially result in higher exploitation. Managers should evaluate the potential benefits of instituting closed seasons during the stratified period, and stock assessment models should take into account the seasonal niche compression.

  15. Assessing accumulation and biliary excretion of naphthenic acids in yellow perch exposed to oil sands-affected waters.

    PubMed

    van den Heuvel, Michael R; Hogan, Natacha S; MacDonald, Gillian Z; Berrue, Fabrice; Young, Rozlyn F; Arens, Collin J; Kerr, Russell G; Fedorak, Phillip M

    2014-01-01

    Naphthenic acids are known to be the most prevalent group of organic compounds in oil sands tailings-associated waters. Yellow perch (Perca flavescens) were exposed for four months to oil sands-influenced waters in two experimental systems located on an oil sands lease 30 km north of Fort McMurray Alberta: the Demonstration Pond, containing oil sands tailings capped with natural surface water, and the South Bison Pond, integrating lean oil sands. Yellow perch were also sampled from three lakes: Mildred Lake that receives water from the Athabasca River, Sucker Lake, at the edge of oil sands extraction activity, and Kimowin Lake, a distant reference site. Naphthenic acids were measured in perch muscle tissue using gas chromatography-mass spectrometry (GC-MS). Bile metabolites were measured by GC-MS techniques and by high performance liquid chromatography (HPLC) with fluorescence detection at phenanthrene wavelengths. A method was developed using liquid chromatography-high resolution mass spectrometry (LC-HRMS) to evaluate naphthenic acids in bile. Tissue analysis did not show a pattern of naphthenic acids accumulation in muscle tissue consistent with known concentrations in exposed waters. Bile fluorescence and LC-HRMS methods were capable of statistically distinguishing samples originating from oil sands-influenced waters versus reference lakes. Although the GC-MS and HPLC fluorescence methods were correlated, there were no significant correlations of these methods and the LC-HRMS method. In yellow perch, naphthenic acids from oil sands sources do not concentrate in tissue at a measurable amount and are excreted through a biliary route. LC-HRMS was shown to be a highly sensitive, selective and promising technique as an indicator of exposure of biota to oil sands-derived naphthenic acids. PMID:24182406

  16. Perched groundwater-surface interactions and their consequences in stream flow generation in a semi-arid headwater catchment

    NASA Astrophysics Data System (ADS)

    Molenat, Jerome; Bouteffeha, Maroua; Raclot, Damien; Bouhlila, Rachida

    2013-04-01

    In semi-arid headwater catchment, it is usually admitted that stream flow comes predominantly from Hortonian overland flow (infiltration excess overland flow). Consequently, subsurface flow processes, and especially perched or shallow groundwater flow, have not been studied extensively. Here we made the assumption that perched groundwater flow could play a significant role in stream flow generation in semi-arid catchment. To test this assumption, we analyzed stream flow time series of a headwater catchment in the Tunisian Cap Bon region and quantified the flow fraction coming from groundwater discharge and that from overland flow. Furthermore, the dynamics of the perched groundwater was analyzed, by focusing on the different perched groundwater-surface interaction processes : diffuse and local infiltration, diffuse exfiltration, and direct groundwater discharge to the stream channel. This work is based on the 2.6 km² Kamech catchment (Tunisia), which belongs to the long term Mediterranean hydrological observatory OMERE (Voltz and Albergel, 2002). Results show that even though Hortonian overland flow was the main hydrological process governing the stream flow generation, groundwater discharge contribution to the stream channel annually accounted for from 10% to 20 % depending on the year. Furthermore, at some periods, rising of groundwater table to the soil surface in bottom land areas provided evidences of the occurrence of saturation excess overland flow processes during some storm events. Reference Voltz , M. and Albergel , J., 2002. OMERE : Observatoire Méditerranéen de l'Environnement Rural et de l'Eau - Impact des actions anthropiques sur les transferts de masse dans les hydrosystèmes méditerranéens ruraux. Proposition d'Observatoire de Recherche en Environnement, Ministère de la Recherche.

  17. Probing Microbial Activity in a Perched Water Body Located in a Deep Vadose Zone

    NASA Astrophysics Data System (ADS)

    Fujita, Y.; Taylor, J. L.; Henriksen, J. R.; Delwiche, M.; Gebrehiwet, T.; Hubbard, S. S.; Spycher, N.; Weathers, T. S.; Ginn, T. R.; Pfiffner, S. M.; Smith, R. W.

    2011-12-01

    Waste releases to the vadose zone are a legacy of past activities at a number of Department of Energy (DOE) facilities. At the Idaho National Laboratory (INL), 90Sr has been detected in perched water bodies underlying the Idaho Nuclear Technology and Engineering Center (INTEC) facility. Microbially induced calcite precipitation (MICP) using urea-hydrolyzing microbes is one proposed approach for immobilization of 90Sr in the subsurface. The sequestration mechanism is co-precipitation in calcite, promoted by the production of carbonate alkalinity from ureolysis. In order to assess the potential efficacy of MICP at INTEC a field study was conducted at the INL Vadose Zone Research Park (VZRP). The VZRP is located approximately 3 km from INTEC and shares many of the same hydrologic and lithologic features but in a non-contaminated setting. We conducted experiments over two field seasons in a perched water body located approximately 15 meters below land surface, using a 5-spot wellfield design. During the first season amendments (molasses and urea) were injected into the central well and water was extracted from two wells on either side, located along a diagonal. Water samples were characterized for microbial abundance, ureolytic activity and ureC gene numbers, along with solution composition. Before, during and after the injections cross-borehole geophysical imaging was performed, using various combinations of the available wells. During the second field season in situ static experiments were conducted to specifically characterize attached and unattached microbial communities, using surrogate substrates colonized during a 12 week incubation. Based on the field data a first order in situ urea hydrolysis rate constant of 0.034 d-1 was estimated. This was more than an order of magnitude higher than rate constants estimated above-ground using water samples, suggesting that attached microorganisms were responsible for >90% of the observed urea hydrolysis activity. The

  18. Timing, Frequency and Environmental Conditions Associated with Mainstem–Tributary Movement by a Lowland River Fish, Golden Perch (Macquaria ambigua)

    PubMed Central

    Koster, Wayne M.; Dawson, David R.; O’Mahony, Damien J.; Moloney, Paul D.; Crook, David A.

    2014-01-01

    Tributary and mainstem connections represent important links for the movement of fish and other biota throughout river networks. We investigated the timing, frequency and environmental conditions associated with movements by adult golden perch (Macquaria ambigua) between the mainstem of the mid-Murray River and a tributary, the Goulburn River, in south-eastern Australia, using acoustic telemetry over four years (2007–2011). Fish were tagged and released in autumn 2007–2009 in the mid-Murray (n = 42) and lower Goulburn (n = 37) rivers within 3–6 km of the mid-Murray-lower Goulburn junction. 38% of tagged fish undertook mainstem–tributary movements, characterised mostly by temporary occupation followed by return of fish to the original capture river. Approximately 10% of tagged fish exhibited longer-term shifts between the mainstem and tributary. Movement of fish from the tributary into the mainstem occurred primarily during the spawning season and in some years coincided with the presence of golden perch eggs/larvae in drift samples in the mainstem. Many of the tributary-to-mainstem movements occurred during or soon after changes in flow. The movements of fish from the mainstem into the tributary were irregular and did not appear to be associated with spawning. The findings show that golden perch moved freely across the mainstem–tributary interface. This demonstrates the need to consider the spatial, behavioural and demographic interdependencies of aquatic fauna across geographic management units such as rivers. PMID:24788137

  19. Effects of chlorpyrifos ethyl on acetylcholinesterase activity in climbing perch cultured in rice fields in the Mekong Delta, Vietnam.

    PubMed

    Nguyen, Tam Thanh; Berg, Håkan; Nguyen, Hang Thi Thuy; Nguyen, Cong Van

    2015-07-01

    Climbing perch is commonly harvested in rice fields and associated wetlands in the Mekong Delta. Despite its importance in providing food and income to local households, there is little information how this fish species is affected by the high use of pesticides in rice farming. Organophosphate insecticides, such as chlorpyrifos ethyl, which are highly toxic to aquatic organisms, are commonly used in the Mekong Delta. This study shows that the brain acetylcholinesterase (AChE) activity in climbing perch fingerlings cultured in rice fields, was significantly inhibited by a single application of chlorpyrifos ethyl, at doses commonly applied by rice farmers (0.32-0.64 kg/ha). The water concentration of chlorpyrifos ethyl decreased below the detection level within 3 days, but the inhibition of brain AChE activity remained for more than 12 days. In addition, the chlorpyrifos ethyl treatments had a significant impact on the survival and growth rates of climbing perch fingerlings, which were proportional to the exposure levels. The results indicate that the high use of pesticides among rice farmers in the Mekong Delta could have a negative impact on aquatic organisms and fish yields, with implications for the aquatic biodiversity, local people's livelihoods and the aquaculture industry in the Mekong Delta. PMID:25828891

  20. Evaluation of impingement losses of white perch at the Indian Point Nuclear Station and other Hudson River power plants

    SciTech Connect

    Van Winkle, W.; Barnthouse, L.W.; Kirk, B.L.; Vaughan, D.S.

    1980-06-01

    This report evaluates two independent lines of evidence concerning impingement losses of white perch at the power plants on the Hudson River. Based on regression analyses of impingement rate as an index of year-class strength versus year over the period 1972 through 1977, it is concluded that there is little evidence of a statistically significant downward trend. However, an analysis of minimum detectable differences in impingement rates indicates that a long time series of year-class strength would be required to detect even substantial reductions (e.g., 50%). Second, based on our estimates of percent reduction in year-class strength due to impingement (> 20% for the 1974 year class and >15% for the 1975 year class), it is concluded that the level of impingement impact is not acceptable a priori from the point of view of managing the white perch population. Our methodologies and results are compared with those of the utilities, and the bases for the substantial differences in estimate of impingement are discussed. Appendices are included on survival of impinged white perch, impingement rate as an index of population abundance, and ability to detect decreases in population abundance. 57 refs., 29 tabs.

  1. Molecular cloning and tissue expression of uncoupling protein 1, 2 and 3 genes in Chinese perch (Siniperca chuatsi).

    PubMed

    Wen, Zheng-Yong; Liang, Xu-Fang; He, Shan; Li, Ling; Shen, Dan; Tao, Ya-Xiong

    2015-07-01

    Uncoupling proteins (UCPs) are mitochondrial anion carrier proteins, which play important roles in several physiological processes, including thermogenesis, reactive oxygen species generation, growth, lipid metabolism and insulin secretion. Although the roles of UCPs are well understood in mammals, little is known in fish. To investigate the thermogenesis roles in Chinese perch (Siniperca chuatsi), we cloned the UCP1, 2 and 3. The UCP1 consisted of six exons and five introns, and the UCP2 consisted of eight exons and seven introns. The UCP1 was primarily expressed in liver, UCP2 was ubiquitously expressed, and UCP3 was primarily expressed in muscle. The mRNA levels of UCP1 and UCP2 in liver, and UCP3 in muscle were significantly increased after prolonged cold exposure, but did not change after prolonged heat exposure, suggesting that Chinese perch might have a mechanism of response to cold environment, but not to hot environment. The intestinal UCP1 mRNA level was significantly up-regulated after prolonged heat exposure, while the UCP2 mRNA level was significantly up-regulated after prolonged cold exposure, suggesting that the two paralogs might play different roles in intestine of Chinese perch. In addition, the phylogenetic analysis could shed new light on the evolutionary diversification of UCP gene family. PMID:25829150

  2. First evidence for postzygotic reproductive isolation between two populations of Eurasian perch (Perca fluviatilis L.) within Lake Constance

    PubMed Central

    Behrmann-Godel, Jasminca; Gerlach, Gabriele

    2008-01-01

    Background The evolution of reproductive traits, such as hybrid incompatibility (postzygotic isolation) and species recognition (prezygotic isolation), have shown their key role in speciation. Theoretical modeling has recently predicted that close linkage between genes controlling pre- and postzygotic reproductive isolation could accelerate the conditions for speciation. Postzygotic isolation could develop during the sympatric speciation process contributing to the divergence of populations. Using hybrid fitness as a measure of postzygotic reproductive isolation, we empirically studied population divergence in perch (Perca fluviatilis L.) from two genetically divergent populations within a lake. Results During spawning time of perch we artificially created parental offspring and F1 hybrids of the two populations and studied fertilization rate and hatching success under laboratory conditions. The combined fitness measure (product of fertilization rate and hatching success) of F1 hybrids was significantly reduced compared to offspring from within population crosses. Conclusion Our results suggest intrinsic genetic incompatibility between the two populations and indicate that population divergence between two populations of perch inhabiting the same lake may indeed be promoted by postzygotic isolation. PMID:18218080

  3. Functional integrity of the interrenal tissue of yellow perch from contaminated sites tested in vivo

    SciTech Connect

    Girard, C.; Brodeur, J.C.; Hontela, A.

    1995-12-31

    The normal activation of the hypothalamo-pituitary-interrenal axis (HPI axis) in response to capture is disrupted in fish subjected to life-long exposure to heavy metals, PCBs and PAHs. The ability to increase plasma cortisol in yellow perch (Perca flavescens) from sites contaminated by heavy metals and organic compounds, and from a reference site was assessed by the Capture stress test and by the ACTH Challenge test, a new standardized in vivo method designed for field studies. The effects of seasonal factors, such as temperature and gonadal maturity on these tests were investigated. Measures of liver and muscle glycogen and histopathology were made to further characterize the biochemical and structural changes that may occur along with hormonal changes. The Capture stress test showed that an acute source of stress induced a lower cortisol response in fish from the highly contaminated site compared to the reference site, revealing a functional impairment of the HPI axis. The ACTH Challenge test showed that the hormonal responsiveness of the cortisol-secreting interrenal tissue, stimulated by a standard dose of ACTH injected i.p., was lower in fish from the highly contaminated site than the reference site. Spring is the season during which the impairment was the most evident. The possibility of using the reduced capacity of feral fish to respond to a standardized ACTH Challenge as an early bioindicator of toxic stress is discussed.

  4. Effects of freezing on white perch Morone americana (Gmelin, 1789): Implications for multivariate morphometrics

    USGS Publications Warehouse

    Kocovsky, Patrick

    2015-01-01

    This study tested the hypothesis that duration of freezing differentially affects whole-body morphometrics of a derived teleost. Whole-body morphometrics are frequently analyzed to test hypotheses of different species, or stocks within a species, of fishes. Specimens used for morphometric analyses are typically fixed or preserved prior to analysis, yet little research has been done on how fixation or preservation methods or duration of preservation of specimens might affect outcomes of multivariate statistical analyses of differences in shape. To determine whether whole-body morphometrics changed as a result of freezing, 23 whole-body morphometrics of age-1 white perch (Morone americana) from western Lake Erie (n = 211) were analyzed immediately after capture, after being held on ice overnight, and after freezing for 100 or 200 days. Discriminant function analysis revealed that all four groups differed significantly from one another (P < 0.0001). The first canonical axis reflected long-axis morphometrics, where there was a clear pattern of positive translation along this axis with duration of preservation. Re-classification analysis demonstrated fish were typically assigned to their original preservation class except for fish frozen 100 days, which assigned mostly to frozen 200 days. Morphometric comparisons using frozen fish must be done on fish frozen for identical periods of time to avoid biases related to the length of time they were frozen. Similar experiments should be conducted on other species and also using formalin- and alcohol-preserved specimens.

  5. A Red-Tailed Hawk perches on a stump at KSC.

    NASA Technical Reports Server (NTRS)

    2000-01-01

    This red-tailed hawk on the roadside at Kennedy Space Center appears to be eyeing the photographer. The red-tailed hawk has a stocky build and broad, rounded wings. Its wide range covers Alaska and Nova Scotia south to Panama. It can frequently be seen perched in a tree at the edge of a meadow, watching for movement in the grass below. It feeds mainly on small rodents. The Refuge encompasses 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects. Kennedy Space Center shares a boundary with the Merritt Island National Wildlife Refuge, encompassing 92,000 acres that are a habitat for more than 331 species of birds, 31 mammals, 117 fishes, and 65 amphibians and reptiles. The marshes and open water of the refuge provide wintering areas for 23 species of migratory waterfowl, as well as a year-round home for great blue herons, great egrets, wood storks, cormorants, brown pelicans and other species of marsh and shore birds, as well as a variety of insects.

  6. Does overwinter temperature affect maternal body composition and egg traits in yellow perch Perca flavescens?

    PubMed

    Feiner, Z S; Coulter, D P; Guffey, S C; Höök, T O

    2016-04-01

    Female yellow perch Perca flavescens exposed to three overwinter temperature regimes (4, 8 and 13° C) for 150 days spawned in markedly different proportions upon spring warming (37% of females in 4° C v. 64 and 91% in 8 and 13° C treatments, respectively), but exhibited no differences in fecundity, egg size or egg lipid content. Females held at 4° C also exhibited less within-clutch egg size variation than females held at 13° C. Moreover, eggs differed among temperature treatments in the overall proportions of 18 fatty acids, with the colder treatments resulting in potentially higher quality eggs containing more of the unsaturated fatty acids C16:1, C22:6-n3 and C18:2 cis. Female somatic condition also varied with temperature. Maternal somatic growth and protein content increased while lipid content decreased in 13° C compared to the colder treatments. There were, however, no differences among treatments in the fatty acid composition of maternal muscle. These results suggest that the temperatures experienced during winter may be less influential to P. flavescens egg size or number, which may exhibit relatively little plasticity in this species, but can alter both the number of females that spawn and the overall composition of eggs and maternal somatic tissues, which may have implications for future reproductive success. PMID:26939992

  7. Genetic variability and glacial origins of yellow perch (Perca flavescens) in North America

    USGS Publications Warehouse

    Todd, Thomas N.; Hatcher, Charles O.

    1993-01-01

    Starch–gel electrophoresis was used to analyze muscle and liver tissue for variation in 13 enzymes representing 31 presumptive loci in yellow perch (Perca flavescens) from 13 localities scattered throughout the natural geographic range of the species in North America. Ten loci were polymorphic, but only three, alcohol dehydrogenase (ADH-1*), glucose-6-phosphate isomerase (GPI-1*), and phosphoglucomutase (PGM-2*), exhibited polymorphisms at relatively high frequencies across localities. Western populations were fixed for one allele at ADH-1*, eastern populations were fixed for another allele, and populations from intermediate locations in Lake Ontario and Pennsylvania had both alleles. The distributions of alleles at GPI-1* and PGM-2*were similar to that of ADH-1*, exhibiting strong differences between eastern and western populations, although the delineation was not as clear. Western populations were much less variable than eastern populations, and the distribution of alleles indicated that the two groups were derived from Mississippi and Atlantic glacial refugia. Populations near the physiographic discontinuity between the Mississippi and Atlantic drainages in western New York and Pennsylvania exhibited an admixture of typically western and eastern alleles. Such observations are consistent with the mixed faunal history of the region and limited postglacial dispersal of western and eastern populations across the boundary.

  8. The complete mitochondrial genome of jade perch, Scortum barcoo (Perciformes: Terapontidae: Scortum).

    PubMed

    Liu, Chun; Li, Kaibin; Wang, Qing; Wang, Fang; Zeng, Weiwei; Mai, Xiaomei; Wu, Shuqin

    2016-09-01

    This is the first documentation of the complete mitochondrial genome sequence of the jade perch, Scortum barcoo. The 16,843 bp mitogenome containes 37 genes (13 protein-coding genes, 22 transfer RNA genes, and 2 ribosomal RNA genes) and two main non-coding regions (the control region and the origin of the light strand replication) as do other vertebrate mitogenomes. The overall base composition of S. barcoo is 27.39% for A, 24.74% for T, 31.14% for C and 16.73% for G, with a slight A + T bias of 52.13%. All protein-coding genes are initiated with ATG except for COX1, which begin with GTG instead. Meanwhile, the termination codons of 13 protein-coding genes are varied with TAA, TAG, TA, T or AGG. The measure of complete mitogenome sequence of S. barcoo will provide fundamental data for the phylogenetic and biogeographic studies of the Terapontidae. PMID:25799351

  9. Early life history of the yellow perch, Perca flavescens (Mitchill), in the Red Lakes, Minnesota

    USGS Publications Warehouse

    Pycha, Richard L.; Smith, Lloyd L., Jr.

    1955-01-01

    The early life history of the yellow perch, an important commercial species in the Red Lakes, Minnesota, has been studied with special reference to length at scale formation, growth rate during first season of life, and food habits as they relate to growth and survival. Scales are fully imbricated in the area of 12th to 14th lateral line scales at 24 millimeters total length. There is a wide annual varition in first season's growth which is not correlated with growth in older fish. Body-scale relationship is rectilinear from 24 to 280 millimeters. Length-weight relationship during the first year is expressed by the equation W = 0.6198 × 10−5 L3.1251 which is very similar to that describing the relationship in later years. Stomach analysis indicates food is primarily plankton but in some seasons fish may be strongly dependent on bottom forms. Variations in food availability appear to be associated with changes in growth and may have a major influence on survival.

  10. An artificial perch to help Snail Kites handle an exotic Apple Snail

    USGS Publications Warehouse

    Pias, Kyle E.; Welch, Zach C.; Kitchens, Wiley M.

    2012-01-01

    In the United States, the Snail Kite (Rostrhamus sociabilis plumbeus) is a federally endangered species and restricted to the wetlands of south-central Florida where the current population numbers less than 1,500. The Snail Kite is an extreme dietary specialist, previously feeding almost exclusively on one species of snail, the Florida Apple Snail (Pomacea paludosa). Within the past decade, an exotic species of apple snail, the Island Apple Snail (Pomacea insularum), has become established on lakes in central Florida. Island Apple Snails are larger than the native Florida Apple Snails, and Snail Kites handle the exotic snails less efficiently. Juvenile Snail Kites, in particular, have lower daily energy balances while feeding on Island Apple Snails. An inexpensive, easy-to-construct platform was developed that would provide Snail Kites with a flat, stable surface on which to extract snails. The platform has the potential to reduce the difficulties Snail Kites experience when handling exotic snails, and may benefit the Snail Kite population as a whole. Initial observations indicate that Snail Kites use the platforms frequently, and snails extracted at the platforms are larger than snails extracted at other perches.

  11. Investigating bomb radiocarbon transport in the southern Pacific Ocean with otolith radiocarbon

    NASA Astrophysics Data System (ADS)

    Grammer, G. L.; Fallon, S. J.; Izzo, C.; Wood, R.; Gillanders, B. M.

    2015-08-01

    To explore the transport of carbon into water masses from the surface ocean to depths of ∼ 1000 m in the southwest Pacific Ocean, we generated time series of radiocarbon (Δ14C) from fish otoliths. Otoliths (carbonate earstones) from long-lived fish provide an indirect method to examine the "bomb pulse" of radiocarbon that originated in the 1950s and 1960s, allowing identification of changes to distributions of 14C that has entered and mixed within the ocean. We micro-sampled ocean perch (Helicolenus barathri) otoliths, collected at ∼ 400- 500 m in the Tasman Sea, to obtain measurements of Δ14C for those depths. We compared our ocean perch Δ14C series to published otolith-based marine surface water Δ14C values (Australasian snapper (Chrysophrys auratus) and nannygai (Centroberyx affinis)) and to published deep-water values (800-1000 m; orange roughy (Hoplostethus atlanticus)) from the southwest Pacific to establish a mid-water Δ14C series. The otolith bomb 14C results from these different depths were consistent with previous water mass results in the upper 1500 m of the southwest Pacific Ocean (e.g. World Ocean Circulation Experiment and Geochemical Ocean Sections Study). A comparison between the initial Δ14C bomb pulse rise at 400-500 m suggested a ventilation lag of 5 to 10 yr, whereas a comparison of the surface and depths of 800-1000 m detailed a 10 to 20 yr lag in the time history of radiocarbon invasion at this depth. Pre-bomb reservoir ages derived from otolith 14C located in Tasman Sea thermocline waters were ∼ 530 yr, while reservoir ages estimated for Tasman Antarctic intermediate water were ∼ 730 yr.

  12. Brain acetylcholinesterase activity in shiner perch (Cymatogaster aggregata) and juvenile chinook salmon (Oncorhynchus tshawytscha) after application of carbaryl to control burrowing shrimp within Willapa Bay, Washington.

    PubMed

    Troiano, Alexandra T; King, Kerensa A; Grue, Christian E; Grassley, James M; Ekblad, Cathy J

    2013-11-01

    Carbaryl has been applied in Willapa Bay, Washington, for five decades to control burrowing shrimp (Neotrypaea californiensis and Upogebia pugettensis) on commercial oyster (Crassostrea gigas) beds. Concerns about effects on nontarget species, including fishes, have led to restrictions in use despite a lack of data on in situ exposure. We measured brain acetylcholinesterase (AChE) activity in adult Shiner perch (Cymatogaster aggregata) and juvenile Chinook salmon (Oncorhynchus tshawytscha) after operational applications. We hypothesized that exposure in Shiner perch would be greater than in juvenile Chinook salmon because of their greater site fidelity and benthic foraging. However, Shiner perch exhibited no statistically significant AChE inhibition. Enzyme activity was statistically decreased (≤14 %) in juvenile Chinook salmon after a second spray event; however, inhibition was less than that associated with overt effects and was similar to controls by 48 h after the spray. Diet analyses confirmed that Shiner perch were primarily feeding on benthic invertebrates and that juvenile Chinook salmon were feeding primarily within the water column. Composition of Shiner perch diets and amount of food consumed varied little among channels and time periods; however, Shiner perch on beds consumed more food 6 h after application than those at other time points and locations. There were no consistent differences in the diets of juvenile Chinook salmon within channels among time periods. Results suggest (1) that carbaryl applications pose little hazard to fish in the bay having habitat and dietary preferences similar to those of Shiner perch and juvenile Chinook salmon and (2) that quantification of direct exposure in the field is essential to adequately assess risk. PMID:24042340

  13. Arctic Ocean

    NASA Technical Reports Server (NTRS)

    Parkinson, Claire L.; Zukor, Dorothy J. (Technical Monitor)

    2000-01-01

    The Arctic Ocean is the smallest of the Earth's four major oceans, covering 14x10(exp 6) sq km located entirely within the Arctic Circle (66 deg 33 min N). It is a major player in the climate of the north polar region and has a variable sea ice cover that tends to increase its sensitivity to climate change. Its temperature, salinity, and ice cover have all undergone changes in the past several decades, although it is uncertain whether these predominantly reflect long-term trends, oscillations within the system, or natural variability. Major changes include a warming and expansion of the Atlantic layer, at depths of 200-900 m, a warming of the upper ocean in the Beaufort Sea, a considerable thinning (perhaps as high as 40%) of the sea ice cover, a lesser and uneven retreat of the ice cover (averaging approximately 3% per decade), and a mixed pattern of salinity increases and decreases.

  14. Ocean circulation

    NASA Astrophysics Data System (ADS)

    Thompson, Andrew F.; Rahmstorf, Stefan

    The ocean moderates the Earth's climate due to its vast capacity to store and transport heat; the influence of the large-scale ocean circulation on changes in climate is considered in this chapter. The ocean experiences both buoyancy forcing (through heating/cooling and evaporation/precipitation) and wind forcing. Almost all ocean forcing occurs at the surface, but these changes are communicated throughout the entire depth of the ocean through the meridional overturning circulation (MOC). In a few localized regions, water become sufficiently dense to penetrate thousands of meters deep, where it spreads, providing a continuous source of deep dense water to the entire ocean. Dense water returns to the surface and thus closes the MOC, either through density modification due to diapycnal mixing or by upwelling along sloping isopycnals across the Southern Ocean. Determination of the relative contributions of these two processes in the MOC remains an active area of research. Observations obtained primarily from isotopic compositions in ocean sediments provide substantial evidence that the structure of the MOC has changed significantly in the past. Indeed, large and abrupt changes to the Earth's climate during the past 120,000 years can be linked to either a reorganization or a complete collapse of the MOC. Two of the more dramatic instances of abrupt change include Dansgaard-Oeschger events, abrupt warmings that could exceed 10°C over a period as short as a few decades, and Heinrich events, which are associated with massive freshwater fluxes due to rapid iceberg discharges into the North Atlantic. Numerical models of varying complexity that have captured these abrupt transitions all underscore that the MOC is a highly nonlinear system with feedback loops, multiple equilibria, and hysteresis effects. Prediction of future abrupt shifts in the MOC or "tipping points" remains uncertain. However, the inferred behavior of the MOC during glacial climates suggests that

  15. Concentrations of 17 elements in the zebra mussel (Dreissena polymorpha), in different tissues of perch (Perca fluviatilis), and in perch intestinal parasites (Acanthocephalus lucii) from the subalpine lake Mondsee, Austria

    SciTech Connect

    Sures, B.; Steiner, W.; Rydlo, M.; Taraschewski, H.

    1999-11-01

    Concentrations of the elements Al, Ag, Ba, ca, Cd, Co, Cr, cu, Fe, Ga, Mg, Mn, Ni, Pb, Sr, Tl, and Zn were analyzed by inductively coupled plasma mass spectrometry in the acanthocephalan Acanthocephalus lucii (Mueller); in its host, Perca fluviatilis (L.), and in the soft tissue of the zebra mussel, Dreissena polymorpha (Pallas). All animals were collected from the same sampling site in a subalpine lake, Mondsee, in Austria. Most of the elements were found at significantly higher concentrations in the acanthocephalan than in different tissues (muscle, liver, and intestinal wall) of its perch host. Only Co was concentrated in the liver of perch to a level that was significantly higher than that found in the parasite. Most of the analyzed elements were also present at significantly higher concentrations in A. lucii than in D. polymorpha. Barium and Cr were the only elements recorded at higher concentrations in the mussel compared with the acanthocephalan. Thus, when comparing the accumulation of elements, the acanthocephalans appear to be even more suitable than the zebra mussels in terms of their use in the detection of metal contamination within aquatic biotopes. Spearman correlation analysis revealed that the concentrations of several elements within the parasites decreased with increasing infrapopulation. Furthermore, the levels of some elements in the perch liver were negatively correlated with the weight of A. lucii in the intestine. Thus, it emerged that not only is there competition for elements between acanthocephalans inside the gut but there is also competition for these elements between the host and the parasites. The elevated element concentrations demonstrated here in the parasitic worm A. lucii provide support for further investigations of these common helminthes and of their accumulation properties.

  16. Flow cytometric method for measuring chromatin fragmentation in fixed sperm from yellow perch (Perca flavescens)

    USGS Publications Warehouse

    Jenkins, Jill A.; Draugelis-Dale, Rassa O.; Pinkney, Alfred E.; Iwanowicz, Luke R.; Blazer, Vicki

    2015-01-01

    Declining harvests of yellow perch, Perca flavescens, in urbanized watersheds of Chesapeake Bay have prompted investigations of their reproductive fitness. The purpose of this study was to establish a flow cytometric technique for DNA analysis of fixed samples sent from the field to provide reliable gamete quality measurements. Similar to the sperm chromatin structure assay, measures were made on the susceptibility of nuclear DNA to acid-induced denaturation, but used fixed rather than live or thawed cells. Nuclei were best exposed to the acid treatment for 1 minute at 37 °C followed by the addition of cold (4 °C) propidium iodide staining solution before flow cytometry. The rationale for protocol development is presented graphically through cytograms. Field results collected in 2008 and 2009 revealed DNA fragmentation up to 14.5%. In 2008, DNA fragmentation from the more urbanized watersheds was significantly greater than from reference sites (P = 0.026) and in 2009, higher percentages of haploid testicular cells were noted from the less urbanized watersheds (P = 0.032) indicating better reproductive condition at sites with less urbanization. For both years, total and progressive live sperm motilities by computer-assisted sperm motion analysis ranged from 19.1% to 76.5%, being significantly higher at the less urbanized sites (P < 0.05). This flow cytometric method takes advantage of the propensity of fragmented DNA to be denatured under standard conditions, or 1 minute at 37 °C with 10% buffered formalin–fixed cells. The study of fixed sperm makes possible the restrospective investigation of germplasm fragmentation, spermatogenic ploidy patterns, and chromatin compaction levels from samples translocated over distance and time. The protocol provides an approach that can be modified for other species across taxa.

  17. Adding Perches for Cross-Pollination Ensures the Reproduction of a Self-Incompatible Orchid

    PubMed Central

    Li, Li-Qiang; Rao, Wen-Hui; Zhang, Yu-Ting; Tang, Guang-Da; Huang, Lai-Qiang

    2013-01-01

    Background Outcrossing is known to carry genetic advantages in comparison with inbreeding. In many cases, flowering plants develop a self-incompatibility mechanism, along with a floral component adaptation mechanism, to avoid self-pollination and to promote outbreeding. Orchids commonly have a lip in their flower that functions as the a visiting plate for insect pollinators. Aside from the lip, however, many species (including Coelogyne rigida) have sheaths around the axis of inflorescence. The function of these sheaths remains unknown, and has long been a puzzle to researchers. Methodology/Principal Findings We investigated the function of these sheaths in relation to the lip and the pollinators, as well as their role in the modes of pollination and reproduction of Coelogyne rigida in 30 flowering populations of orchids in the limestone area of Southeast Yunnan, China. We found that self-incompatible C. rigida developed specialized bird perches around the basal axis of inflorescence to attract sunbirds and to complement their behavioral tendency to change foraging locations frequently. This self-incompatibility mechanism operates separately from the floral component adaptation mechanism. This mechanism thus prevents bees from repeatedly visiting the floral lip of the same plant which, in turn, results in autogamy. In this way, instead of preventing autogamy, C. rigida responds to these negative effects through a highly efficient cross-pollination method that successfully transfers pollen to different plants. Conclusions The proposed method ensures reproductive success, while offsetting the infertile self-pollination by insects, thereby reducing mating costs and addressing the lack of cross-pollination. The adaptation provides a novel and striking example of structural adaptation that promotes cross-pollination in angiosperms. PMID:23308277

  18. Effect of bioconcentration and trophic transfer on realized exposure to oxazepam in 2 predators, the dragonfly larvae (Aeshna grandis) and the Eurasian perch (Perca fluviatilis).

    PubMed

    Heynen, Martina; Fick, Jerker; Jonsson, Micael; Klaminder, Jonatan; Brodin, Tomas

    2016-04-01

    Psychoactive substances are used worldwide and constitute one of the most common groups of pharmaceutical contaminants in surface waters. Although these pharmaceuticals are designed to be efficiently eliminated from the human body, very little is known about their trophic-transfer potential in aquatic wildlife. Therefore, the goal of the present study was to quantify and compare uptake of an anxiolytic (oxazepam) from water (bioconcentration) and via the consumption of contaminated diet (trophic transfer) in 2 common freshwater predators: Eurasian perch (Perca fluviatilis) and the dragonfly larvae Aeshna grandis. Bioconcentration and trophic transfer of oxazepam were found in both predator species. However, higher bioconcentrations were observed for perch (bioconcentration factor [BCF], 3.7) than for dragonfly larvae (BCF, 0.5). Perch also retained more oxazepam from consumed prey (41%) than dragonfly larvae (10%), whereas the relative contribution via prey consumption was 14% and 42% for perch and dragonflies, respectively. In addition, bioconcentration was negatively correlated with perch weight, indicating that exposure levels in natural contaminated environments differ between individuals of different size or between different developmental stages. Hence, trophic transfer of pharmaceuticals may indeed occur, and estimates of environmental exposures that do not consider intake via food or size-dependent bioconcentration may therefore lead to wrongful estimations of realized exposure levels in natural contaminated ecosystems. PMID:26762222

  19. The Ocean.

    ERIC Educational Resources Information Center

    Broecker, Wallace S.

    1983-01-01

    The chemistry of the ocean, whose constituents interact with those of air and land to support life and influence climate, is known to have undergone changes since the last glacial epoch. Changes in dissolved oxygen, calcium ions, phosphate, carbon dioxide, carbonate ions, and bicarbonate ions are discussed. (JN)

  20. Ocean nutrients

    NASA Astrophysics Data System (ADS)

    Boyd, Philip W.; Hurd, Catriona L.

    Nutrients provide the chemical life-support system for phytoplankton in the ocean. Together with the carbon fixed during photosynthesis, nutrients provide the other elements, such as N and P, needed to synthesize macromolecules to build cellular constituents such as ribosomes. The makeup of these various biochemicals, such as proteins, pigments, and nucleic acids, together determine the elemental stoichiometry of an individual phytoplankton cell. The stoichiometry of different phytoplankton species or groups will vary depending on the proportions of distinct cellular machinery, such as for growth or resource acquisition, they require for their life strategies. The uptake of nutrients by phytoplankton helps to set the primary productivity, and drives the biological pump, of the global ocean. In the case of nitrogen, the supply of nutrients is categorized as either new or regenerated. The supply of new nitrogen, such as nitrate upwelled from the ocean' interior or biological nitrogen fixation, is equal to the vertical export of particular organic matter from the upper ocean on a timescale of years. Nutrients such as silica can also play a structural role in some phytoplankton groups, such as diatoms, where they are used to synthesize a siliceous frustule that offers some mechanical protection from grazers. In this chapter, we also explore nutrient uptake kinetics, patterns in nutrient distributions in space and time, the biogeochemical cycle of nitrogen, the atmospheric supply of nutrients, departures from the Redfield ratio, and whether nutrient distributions and cycling will be altered in the future

  1. Bone-Remodeling Transcript Levels Are Independent of Perching in End-of-Lay White Leghorn Chickens

    PubMed Central

    Dale, Maurice D.; Mortimer, Erin M.; Kolli, Santharam; Achramowicz, Erik; Borchert, Glenn; Juliano, Steven A.; Halkyard, Scott; Sietz, Nick; Gatto, Craig; Hester, Patricia Y.; Rubin, David A.

    2015-01-01

    Osteoporosis is a bone disease that commonly results in a 30% incidence of fracture in hens used to produce eggs for human consumption. One of the causes of osteoporosis is the lack of mechanical strain placed on weight-bearing bones. In conventionally-caged hens, there is inadequate space for chickens to exercise and induce mechanical strain on their bones. One approach is to encourage mechanical stress on bones by the addition of perches to conventional cages. Our study focuses on the molecular mechanism of bone remodeling in end-of-lay hens (71 weeks) with access to perches. We examined bone-specific transcripts that are actively involved during development and remodeling. Using real-time quantitative PCR, we examined seven transcripts (COL2A1 (collagen, type II, alpha 1), RANKL (receptor activator of nuclear factor kappa-B ligand), OPG (osteoprotegerin), PTHLH (PTH-like hormone), PTH1R (PTH/PTHLH type-1 receptor), PTH3R (PTH/PTHLH type-3 receptor), and SOX9 (Sry-related high mobility group box)) in phalange, tibia and femur. Our results indicate that the only significant effect was a difference among bones for COL2A1 (femur > phalange). Therefore, we conclude that access to a perch did not alter transcript expression. Furthermore, because hens have been used as a model for human bone metabolism and osteoporosis, the results indicate that bone remodeling due to mechanical loading in chickens may be a product of different pathways than those involved in the mammalian model. PMID:25625518

  2. Cloning and functional characterization of Δ6 fatty acid desaturase (FADS2) in Eurasian perch (Perca fluviatilis).

    PubMed

    Geay, F; Tinti, E; Mellery, J; Michaux, C; Larondelle, Y; Perpète, E; Kestemont, P

    2016-01-01

    The Eurasian perch (Perca fluviatilis) is a freshwater carnivorous species of high interest to diversify inland aquaculture. However, little is known about its ability to bioconvert polyunsaturated fatty acids (PUFAs) from plant oils into long chain polyunsaturated fatty acids (LC-PUFAs). In this study, special attention has been given to the fatty acid desaturase 2 (FADS2) which is commonly described to be a rate-limiting enzyme of the LC-PUFA biosynthesis. This work reports on the cloning, tissue expression and functional characterization of the Eurasian perch fads2, but also on the cloning of two alternative splicing transcripts named fads2-AS1 and fads2-AS2. The fads2 cDNA cloned is composed of an open reading frame (ORF) of 1338 nucleotides (nt) and encodes a protein of 445 amino acids. This deduced amino acid sequence displays the typical structure of microsomal FADS2 including two transmembrane domains and an N-terminal cytochrome b5 domain with the "HPGG" motif. Quantitative real-time PCR assay of fads2, fads2-AS1 and fads2-AS2 expressions revealed that the fads2 transcript was mainly expressed in the liver and intestine and exhibited a typical gene expression pattern of freshwater species while fads2-AS1 and fads2-AS2 genes were highly expressed in the brain, followed by the liver and intestine. Functional characterization of Eurasian perch FADS2 in transgenic yeast showed a fully functional Δ6 desaturation activity toward C18 PUFA substrates, without residual Δ5 and Δ8 desaturase activities. PMID:26478265

  3. Bone-remodeling transcript levels are independent of perching in end-of-lay white leghorn chickens.

    PubMed

    Dale, Maurice D; Mortimer, Erin M; Kolli, Santharam; Achramowicz, Erik; Borchert, Glenn; Juliano, Steven A; Halkyard, Scott; Sietz, Nick; Gatto, Craig; Hester, Patricia Y; Rubin, David A

    2015-01-01

    Osteoporosis is a bone disease that commonly results in a 30% incidence of fracture in hens used to produce eggs for human consumption. One of the causes of osteoporosis is the lack of mechanical strain placed on weight-bearing bones. In conventionally-caged hens, there is inadequate space for chickens to exercise and induce mechanical strain on their bones. One approach is to encourage mechanical stress on bones by the addition of perches to conventional cages. Our study focuses on the molecular mechanism of bone remodeling in end-of-lay hens (71 weeks) with access to perches. We examined bone-specific transcripts that are actively involved during development and remodeling. Using real-time quantitative PCR, we examined seven transcripts (COL2A1 (collagen, type II, alpha 1), RANKL (receptor activator of nuclear factor kappa-B ligand), OPG (osteoprotegerin), PTHLH (PTH-like hormone), PTH1R (PTH/PTHLH type-1 receptor), PTH3R (PTH/PTHLH type-3 receptor), and SOX9 (Sry-related high mobility group box)) in phalange, tibia and femur. Our results indicate that the only significant effect was a difference among bones for COL2A1 (femur > phalange). Therefore, we conclude that access to a perch did not alter transcript expression. Furthermore, because hens have been used as a model for human bone metabolism and osteoporosis, the results indicate that bone remodeling due to mechanical loading in chickens may be a product of different pathways than those involved in the mammalian model. PMID:25625518

  4. Commercial-scale out-of-season cryopreservation of Eurasian perch (Perca fluviatilis) sperm and its application for fertilization.

    PubMed

    Bernáth, G; Bokor, Z; Żarski, D; Várkonyi, L; Hegyi, Á; Staszny, Á; Urbányi, B; Radóczi Ifj, J; Horváth, Á

    2016-07-01

    The quality and fertilizing capacity of perch (Perca fluviatilis) sperm collected outside of the spawning season (off-season) and cryopreserved at a commercial scale, were tested. Basic parameters (equilibration time, dilution ratio, sperm concentration, post-thaw motility duration) which can have a significant effect on cryopreservation success were systematically investigated for effects on sperm quality using computer assisted sperm analysis (CASA). No significant decrease in progressive motility (pMOT) and straightness (STR) of fresh-diluted sperm was recorded among groups equilibrated for 0, 30 or 60min in an extender with cryoprotectants. Curvilinear velocity (VCL) was reduced significantly after 30min (30min: 146±15μm/s, 60min: 124±18μm/s) of equilibration compared to the control (174±9μm/s). After thawing, no decrease in pMOT or VCL was observed at different equilibration times in any of the analyzed groups. No correlation was observed among progressive motility, dilution ratios (p=0.7) and cell concentrations (p=0.1). The use of different activating solutions resulted in similar pMOT and VCL in the first 120s post-thaw. Nevertheless, post-thaw sperm motility was reduced after 30s using all activators. Motility parameters with low variation were recorded after thawing of 57 straws (pMOT: 37±7%, VCL: 92±10μm/s, STR: 89±3%). Ten randomly selected straws from commercial-scale cryopreservation resulted in a high fertilization rate (cryopreserved sperm: 72±14%, fresh control: 94±2%). An optimized commercial-scale cryopreservation protocol was successfully developed for Eurasian perch. The applicability of the off-season collected perch sperm for cryopreservation and fertilization was demonstrated. PMID:27236377

  5. Oceanic Plateaus

    NASA Astrophysics Data System (ADS)

    Kerr, A. C.

    2003-12-01

    Although the existence of large continental flood basalt provinces has been known for some considerable time, e.g., Holmes (1918), the recognition that similar flood basalt provinces also exist below the oceans is relatively recent. In the early 1970s increasing amounts of evidence from seismic reflection and refraction studies revealed that the crust in several large portions of the ocean floor is significantly thicker than "normal" oceanic crust, which is 6-7 km thick. One of the first areas of such over-thickened crust to be identified was the Caribbean plate ( Edgar et al., 1971) which Donnelly (1973) proposed to be an "oceanic flood basalt province". The term oceanic plateau was coined by Kroenke (1974), and was prompted by the discovery of a large area of thickened crust (>30 km) in the western Pacific known as the Ontong Java plateau (OJP). As our knowledge of the ocean basins has improved over the last 25 years, many more oceanic plateaus have been identified ( Figure 1). Coffin and Eldholm (1992) introduced the term "large igneous provinces" (LIPs) as a generic term encompassing oceanic plateaus, continental flood basalt provinces, and those provinces which form at the continent-ocean boundary (volcanic rifted margins). (22K)Figure 1. Map showing all major oceanic plateaus, and other large igneous provinces discussed in the text (after Saunders et al., 1992). LIPs are generally believed to be formed by decompression melting of upwelling hotter mantle, known as mantle plumes. Although ideas about hotpots and mantle plumes have been around for almost 40 years (Wilson, 1963), it is only in the past 15 years that LIPs have become the focus of major research. One of the main reasons for the increased research activity into LIPs is the realization that significant proportions of these LIPs erupted over a relatively short time, often less than 2-3 Myr (see review in Coffin, 1994). This has important implications for mantle processes and source regions ( Hart et

  6. Diet shifts and food selection of perch Perca fluviatilis and roach Rutilus rutilus in humic lakes of varying water colour.

    PubMed

    Estlander, S; Nurminen, L; Olin, M; Vinni, M; Immonen, S; Rask, M; Ruuhijärvi, J; Horppila, J; Lehtonen, H

    2010-07-01

    The field data from four humic lakes suggested that water colour may have both direct and indirect effects on inter- and intra-specific interactions of perch Perca fluviatilis and roach Rutilus rutilus. The results agree with suggestions that, compared with R. rutilus, P. fluviatilis may be an inferior forager on zooplankton in highly coloured water. As an indirect effect, water colour decreases the coverage of macrophytes and limits suitable littoral habitats, benefiting R. rutilus over P. fluviatilis. Perca fluviatilis benefiting from complex habitats does not have the advantage in macrophyte-poor highly coloured water. PMID:20646150

  7. Field-Derived Hydraulic Properties for Perched-Water Aquifer Wells 299-E33-350 and 299-E33-351, Hanford Site B-Complex Area

    SciTech Connect

    Newcomer, Darrell R.

    2014-07-01

    During February and March 2014, Pacific Northwest National Laboratory conducted hydraulic (slug) tests at 200-DV-1 Operable Unit wells 299-E33-350 (C8914) and 299-E33-351 (C8915) as part of B-Complex Area Perched-Water characterization activities at the Hanford Site 200-East Area. During the construction/completion phase of each well, two overlapping depth intervals were tested within the unconfined perched-water aquifer contained in the silty-sand subunit of the Cold Creek Unit. The purpose of the slug-test characterization was to provide estimates of transmissivity and hydraulic conductivity for the perched-water aquifer at these selected well locations.

  8. Oceans '88

    SciTech Connect

    Not Available

    1988-01-01

    These proceedings discuss the following papers: Solid waste disposal crisis; Plastics in Ocean; Continental shelf environmental research; Seafood technology advancements; Gulf of Mexico chemosynthetic petroleum seep communities; Water reuse on onshore mariculture and processing facilities; Oil and gas industry conflicts on the outer continental shelf; Cumulative environmental effects of the oil and gas leasing program; Oil and gas exploration; and Oil and gas resource management; Aids to navigation systems and equipment; and Surveillance experiments.

  9. Ocean Worlds

    NASA Astrophysics Data System (ADS)

    Kaltenegger, Lisa; Sasselov, Dimitar

    2013-04-01

    The existence of Earth-size planets covered completely by a water envelope (water planets) has long fascinated scientists and the general public alike (Kuchner 2003; Leger et al. 2004). Sometimes referred to as "ocean planets", stemming from the implicit assumption of Habitable Zone (HZ) temperatures and a liquid water surface, water planets are a much broader class. Here we present a general approach to computing surface and atmospheric conditions on water planets in the HZ.

  10. Oceanic Lidar

    NASA Technical Reports Server (NTRS)

    Carder, K. L. (Editor)

    1981-01-01

    Instrument concepts which measure ocean temperature, chlorophyll, sediment and Gelbstoffe concentrations in three dimensions on a quantitative, quasi-synoptic basis were considered. Coastal zone color scanner chlorophyll imagery, laser stimulated Raman temperaure and fluorescence spectroscopy, existing airborne Lidar and laser fluorosensing instruments, and their accuracies in quantifying concentrations of chlorophyll, suspended sediments and Gelbstoffe are presented. Lidar applications to phytoplankton dynamics and photochemistry, Lidar radiative transfer and signal interpretation, and Lidar technology are discussed.

  11. Remediating RDX-contaminated ground water with permanganate: laboratory investigations for the Pantex perched aquifer.

    PubMed

    Adam, M L; Comfort, S D; Morley, M C; Snow, D D

    2004-01-01

    Ground water beneath the U.S. Department of Energy Pantex Plant is contaminated with the high explosive RDX (hexahydro-1,3,5-trinitro-1,3,5 triazine). The USDOE Innovative Treatment and Remediation Demonstration (ITRD) program identified in situ oxidation by permanganate as a technology fit for further investigation. We evaluated the efficacy of KMnO(4) to transform and mineralize RDX by determining degradation kinetics and carbon mass balances using (14)C-RDX. Aqueous RDX solutions (2-5 mg L(-1)) and RDX-contaminated slurries (50% solids, w/v) were treated with KMnO(4) at 1000, 2000, 4000, and 20000 mg L(-1). Treating an aqueous RDX solution of 2.8 mg L(-1) with 20000 mg KMnO(4) L(-1) decreased RDX to 0.1 mg L(-1) within 11 d while cumulative mineralization proceeded for 14 d until 87% of the labeled carbon was trapped as (14)CO(2). Similar cumulative mineralization was obtained when Pantex aquifer material was included in the solution matrix. Other experiments using 4000 mg KMnO(4) L(-1) showed that initial RDX concentrations (1.3-10.4 mg L(-1)) or initial pH (4-11) had little effect on reaction rates. Attempts to identify RDX degradates and reaction products showed that N(2)O was a product of permanganate oxidation and constituted 20 to 30% of the N balance. Time-course measurements of a (14)C-RDX solution treated with KMnO(4) revealed few (14)C-labeled degradates but through liquid chromatography-mass spectrometry (LC-MS) analysis, we present evidence that 4-nitro-2,4-diaza-butanol is formed. Aquifer microcosm studies confirmed that the transformation products not mineralized by KMnO(4) were much more biodegradable than parent RDX. These results indicate permanganate can effectively transform and mineralize RDX in the presence of aquifer material and support its use as an in situ chemical oxidation treatment for the Pantex perched aquifer. PMID:15537939

  12. [Purification of lectin from perch (Persa fluviatilis L.) roe specific to cellobiose and study of its characteristics].

    PubMed

    Antoniuk, V O

    2004-01-01

    Two lectins with different carbohydrate specificity were purified from perch (Persa fluviatilis L.) roe (coastal ecological form) by affinity chromatography on ovariomucine H-sepharose from a human ovary cyst. One lectin was eluted by cellobiose and another lectin was eluted by L-fucose. The L-fucose-specific lectin interacted only with L-fucose and its derivatives, but did not interact with cellobiose and salicin. The cellobiose-specific lectin interacted with all the examined carbohydrates, but cellobiose was the best inhibitor. This lectin can be also purified on cellulose as an affinity sorbent. Unlike the L-fucose-specific lectin from perch roe, the cellobiose-specific lectin is less soluble in water-saline solutions. Lectin solubility increases greatly in presence of specific inhibitors, cellobiose, in particular. L-fucose, alpha-methyl-L-fucopyranoside and 4-nitrophenyl-alpha-L-fucopyranoside are equivalent inhibitors for both lectins. According to SDS-PAGE data, the lectins contain two components with molecular weight 12-13 kDa. In solutions, these components form molecules with 50 or 100 kDa (depending on pH). Data obtained from electrophoresis in PAAG in alkaline (pH 8.9) and acidic system (pH 4.3), and SDS-PAGE did not display essential distinctions between these both lectins. PMID:15909420

  13. Molecular characterization of the myosatin gene and the effect of fasting on its expression in Chinese perch (Siniperca chuatsi).

    PubMed

    Liu, L; Li, Y L; Xu, S D; Wang, K Z; Wu, P; Chu, W Y; Wang, X Q

    2016-01-01

    Myostatin (MSTN) is an important member of the transforming growth factor-β (TGF-β) superfamily and is a muscle growth inhibitor. In the present study, we cloned the Chinese perch MSTN cDNA sequence and analyzed its expression patterns under various conditions. The MSTN full cDNA sequence was 3347 bp long, including an open-reading frame of 1131 bp, which encoded 376 amino acids. Sequence analysis demonstrated that the MSTN shared a highly conserved signal peptide, a TGF-β functional peptide, a hydrolytic site (RARR), and nine conservative cysteine residues with other members of the TGF-β superfamily. Sequence alignment and phylogenetic tree analyses indicated that the MSTN had a close relationship with teleostean fish, but they are far separated from mammals. Real-time polymerase chain reaction analysis revealed that the MSTN was strongly expressed in the skeletal muscle and heart tissues. Temporal expression analysis demonstrated that the MSTN gene was expressed in very low levels, from 20 to 90 dph (post-hatching development), and was at its highest level at 150 dph (P < 0.05). The fasting-re-feeding experiment showed that the expression of the MSTN gene was initially decreased in response to a single meal, after seven days of fasting, and subsequently increased significantly, and finally decreased back to its original level. Together, our results provided valuable knowledge regarding the regulation of MSTN gene expression in Chinese perch. PMID:27173303

  14. Hepatic oxidative stress and metal subcellular partitioning are affected by selenium exposure in wild yellow perch (Perca flavescens).

    PubMed

    Ponton, Dominic E; Caron, Antoine; Hare, Landis; Campbell, Peter G C

    2016-07-01

    Yellow perch (Perca flavescens) collected from 11 lakes in the Canadian mining regions of Sudbury (Ontario) and Rouyn-Noranda (Quebec) display wide ranges in the concentrations of cadmium (Cd), nickel (Ni), selenium (Se), and thallium (Tl) in their livers. To determine if these trace elements, as well as copper (Cu) and zinc (Zn), are causing oxidative stress in these fish, we measured three biochemical indicators (glutathione (GSH), glutathione disulfide (GSSG) and thiobarbituric acid-reactive substances (TBARS)) in their livers. We observed that 44% of the yellow perch that we collected were at risk of cellular oxidative stress and lipid peroxidation. Considering all fish from all lakes, higher liver Se concentrations were coincident with both lower proportions of GSSG compared to GSH and lower concentrations of TBARS, suggesting that the essential trace-element Se acts as an antioxidant. Furthermore, fish suffering oxidative stress had higher proportions of Cd, Cu and Zn in potentially sensitive subcellular fractions (organelles and heat-denatured proteins) than did fish not suffering from stress. This result suggests that reactive oxygen species may oxidize metal-binding proteins and thereby reduce the capacity of fish to safely bind trace metals. High Cd concentrations in metal-sensitive subcellular fractions likely further exacerbate the negative effects of lower Se exposure. PMID:27131821

  15. Chemosensory mediated behaviors and gene transcription profiles in wild yellow perch (Perca flavescens) from metal contaminated lakes.

    PubMed

    Azizishirazi, Ali; Dew, William A; Bougas, Berenice; Dashtban, Mehdi; Bernatchez, Louis; Pyle, Greg G

    2014-08-01

    The olfactory system of fish is sensitive to the toxic effects of low concentrations of contaminants. To investigate the effects of long-term metal exposure on olfaction in wild yellow perch (Perca flavescens), fish from one clean (Geneva Lake) and two metal-contaminated lakes (Ramsey and Hannah lakes) were collected in and around the metal-mining district of Sudbury, ON. Two different techniques were used to measure the effects of exposure to environmental contamination: (i) behavioral responses were recorded in response to conspecific skin extract and (ii) gene transcription differences in olfactory rosettes were characterized using a novel, 1000-candidate gene yellow perch microarray. Behavioral assays performed on fish from the clean lake demonstrated avoidance of a conspecific skin extract, while fish from metal contaminated lakes showed no avoidance response. A total of 109 out of the 1000 genes were differentially transcribed among the lakes. Most of the differentially transcribed genes were between the two metal contaminated lakes relative to either of the contaminated lakes and the reference lake. No genes were differentially expressed between Geneva Lake (clean) and Hannah Lake (metal contaminated). These results demonstrated that even though the different populations of fish from both Hannah and Ramey lakes were affected at the behavioral level, the impairment of olfaction was not measurable using gene transcriptional changes in olfactory rosettes. PMID:24859710

  16. The feasibility of thermal inertia mapping for detection of perched water tables in semi-arid irrigated lands

    NASA Technical Reports Server (NTRS)

    Ezra, C. E.; Estes, J. E.; Bonn, F.

    1982-01-01

    The thermal inertia mapping remote sensing technique is evaluated as a potential method for delineating areas of shallow perched water tables and related salinization problems on a regional basis. This method for detecting shallow water tables is based on the existence of significant differences in soil thermal properties between wet and dry soil profiles. Ground observations were conducted at two different test sites in California along the flight line, with one site located in a perched water table area and the other site in a well drained area. Measurements were taken hourly during a four day period (two days before and two days after the flight) for variables such as radiometric, meteorologic, soil moisture and temperature profiles, and surface characteristics. Results indicate that it is not feasible using present apparent thermal inertia remote sensing techniques to reliably delineate regional patterns of very shallow water tables due to the complex environmental system. However, some features within specific fields which may be directly related to the local presence of shallow water tables, such as differences in evaporative cooling due to soil moisture effects between and within fields, can be detected using the thermal inertia technique.

  17. Combined effects of temperature changes and metal contamination at different levels of biological organization in yellow perch.

    PubMed

    Grasset, Julie; Ollivier, Élodie; Bougas, Bérénice; Yannic, Glenn; Campbell, Peter G C; Bernatchez, Louis; Couture, Patrice

    2016-08-01

    In this study, we measured the effects of temperature (9°C, 20°C, and 28°C), metal contamination (cadmium and nickel) and their interaction on yellow perch (Perca flavescens) using liver enzymatic and transcriptomic endpoints and biometric indices. Kidney metal concentrations increased with a rise of temperature. The biometric indices analysed (Fulton condition factor, pyloric cæca, hepatosomatic and gonadosomatic indices) generally decreased with an increase of temperature but not with metal contamination. At the enzymatic level, the activity of superoxide dismutase (SOD), involved in antioxidant response, was affected by both temperature and metal contamination, whereas the activity of glucose-6-phosphate dehydrogenase (G6PDH), involved in energy accumulation but also in antioxidant response, was only affected by metal exposure. The response of perch to the stressors at the transcriptional level differed from the metabolic response. In particular, the transcription level of the cco and g6pdh genes sharply decreased with increasing temperature, while the activities of the corresponding enzymes remained stable. The normal response of the transcription level of the apoptotic gene (diablo) to heat stress was also altered in metal-contaminated fish. The combination of metal and temperature stresses also modified the response of antioxidant metabolism induced by these stressors individually. This study contributes to a better understanding of the influences of natural stressors like temperature on biomarkers commonly used in ecotoxicological studies and will facilitate their interpretation in the context of multiple stressors characteristic of field situations. PMID:27351718

  18. Molecular cloning and expression analysis of a F-type lectin gene from Japanese sea perch (Lateolabrax japonicus).

    PubMed

    Qiu, Lihua; Lin, Liansheng; Yang, Keng; Zhang, Hanhua; Li, Jianzhu; Zou, Falin; Jiang, Shigui

    2011-08-01

    The techniques of homology cloning and anchored PCR were used to clone the fucose-binding lectin (F-type lectin) gene from Japanese sea perch (Lateolabrax Japonicus). The full-length cDNA of sea perch F-lectin (JspFL) contained a 5' untranslated region (UTR) of 39 bp, an ORF of 933 bp encoding a polypeptide of 310 amino acids with an estimated molecular mass of 10.82 kDa and a 3' UTR of 332 bp. The searches for nucleotides and protein sequence similarities with BLAST analysis indicated that the deduced amino acid sequence of JspFL was homological to the Fucose-binding lectin in other fish species. In the JspFL deduced amino acid sequence, two tandem domains that exhibit the eel carbohydrate-recognition sequence motif were found. The temporal expressions of gene in the different tissues were measured by real-time PCR. And the mRNA expressions of the gene were constitutively expressed in tissues including spleen, head-kidney, liver, gill, and heart. The JspFL expression in spleen was different during the stimulated time point, 2 h later the expression level became up-regulated, and 6 h later the expression level became down-regulated. The result indicated that JspFL was constitutive and inducible expressed and could play a critical role in the host-pathogen interaction. PMID:21104013

  19. Transcriptional response of yellow perch to changes in ambient metal concentrations-A reciprocal field transplantation experiment.

    PubMed

    Bougas, Bérénice; Normandeau, Eric; Grasset, Julie; Defo, Michel A; Campbell, Peter G C; Couture, Patrice; Bernatchez, Louis

    2016-04-01

    Recent local adaptation to pollution has been evidenced in several organisms inhabiting environments heavily contaminated by metals. Nevertheless, the molecular mechanisms underlying adaptation to high metal concentrations are poorly understood, especially in fishes. Yellow perch (Perca flavescens) populations from lakes in the mining area of Rouyn-Noranda (QC, Canada) have been faced with metal contamination for about 90 years. Here, we examine gene transcription patterns of fish reciprocally transplanted between a reference and a metal-contaminated lake and also fish caged in their native lake. After four weeks, 111 genes were differentially transcribed in metal-naïve fish transferred to the metal-contaminated lake, revealing a plastic response to metal exposure. Genes involved in the citric cycle and beta-oxidation pathways were under-transcribed, suggesting a potential strategy to mitigate the effects of metal stress by reducing energy turnover. However, metal-contaminated fish transplanted to the reference lake did not show any transcriptomic response, indicating a reduced plastic response capability to sudden reduction in metal concentrations. Moreover, the transcription of other genes, especially ones involved in energy metabolism, was affected by caging. Overall, our results highlight environmental stress response mechanisms in yellow perch at the transcriptomic level and support a rapid adaptive response to metal exposure through genetic assimilation. PMID:26867186

  20. Effect of pH on Structural Changes in Perch Hemoglobin that Can Alter Redox Stability and Heme Affinity

    SciTech Connect

    Richards, Mark P.; Aranda, IV, Roman; He, Cai; Phillips, Jr., George N.

    2010-01-07

    pH can be manipulated to alter the oxidative stability of fish-based foods during storage. X-ray diffraction was used to investigate the ability of reduced pH to cause structural changes in fish hemoglobins that lead to enhanced oxidative degradation. Decreasing pH from 8.0 to 6.3 and 5.7 created a large channel for solvent entry into the heme crevice of perch hemoglobin beta chains. The proton-induced opening of this channel occurred between site CD3 and the heme-6-propionate. Solvent entry into the heme crevice can enhance metHb formation and hemin loss, processes that accelerate lipid oxidation. Reduced pH also decreased the distance between Ile at E11 in one of the alpha chains and the ligand above the heme iron atom. This sterically displaces O{sub 2} and protonated O{sub 2} which increases metHb formation. These studies demonstrate that pH reduction causes structural changes in perch hemoglobin which increase oxidative degradation of the heme pigment.

  1. A high-mobility group box 1 that binds to DNA, enhances pro-inflammatory activity, and acts as an anti-infection molecule in black rockfish, Sebastes schlegelii.

    PubMed

    Xin-Peng, Zhao; Yong-Hua, Hu; Yong, Liu; Jing-Jing, Wang; Guang-Hua, Wang; Ren-Jie, Wang; Min, Zhang

    2016-09-01

    High-mobility group box (HMGB) 1 is a chromosomal protein that plays critical roles in DNA transcription, replication and repair. In addition, HMGB1 functions as a pro-inflammatory molecule in many vertebrates and invertebrates. In teleosts, very limited studies of HMGB1 have been reported. In this study, we identified a HMGB1 homologue (SsHMGB1) from black rockfish (Sebastes schlegelii) and analyzed its structure, expression and biological function. The open reading frame of SsHMGB1 is 621 bp, with a 5'-untranslated region (UTR) of 62 bp and a 3'-UTR of 645 bp. SsHMGB1 contains two typical HMG boxes and an acidic C-terminal tail. The deduced amino acid sequence of SsHMGB1 shares the highest overall identity (89.4%) with the HMGB1 of Anoplopoma fimbria. The expression of SsHMGB1 occurred in multiple tissues and was highest in the brain. Moreover, the mRNA level of SsHMGB1 in head kidney (HK) macrophages could be induced by Listonella anguillarum in a time-dependent manner. Recombinant SsHMGB1 purified from Escherichia coli (i) bound DNA fragments in a dose-dependent manner; and (ii) induced the expression of cytokines in HK macrophages, including a significant increase in TNF-α activity and enhanced mRNA level of TNF13B and IL-1 β, which are known to be involved in antibacterial defense; moreover, (iii) significantly improved the macrophage bactericidal activity together with reduced pathogen dissemination and replication of bacteria in fish kidney. These results indicated that SsHMGB1 is a novel HMGB1 that possesses apparent immunoregulatory properties and is likely to be involved in fighting bacterial infection. PMID:27492120

  2. The Oceans

    NASA Astrophysics Data System (ADS)

    Karlsten, Jill

    For many practitioners of the marine sciences, including myself, one of the most alluring aspects of investigating the oceans is the need to marry the scientific disciplines. The complex linkages among geological, chemical, physical, and biological processes that govern the behavior and evolution of nearly 60% of the Earth's surface are fascinating and often surprising. Making progress in decoding this planetary fugue requires investigative strategies that fly squarely in the face of the increasing specialization that characterizes most modern scientific research. The successful oceanographer must endeavor to see the forest as well as the trees, or perhaps more fittingly, the kelp.

  3. CHANGES IN GILL HISTOLOGY OF FATHEAD MINNOWS AND YELLOW PERCH TRANSFERRED TO SOFT WATER OR ACIDIFIED SOFT WATER WITH PARTICULAR REFERENCE TO CHLORIDE CELLS

    EPA Science Inventory

    Fathead minnows, Pimephales promelas, and yellow perch, Perca flavescens, were transferred from moderately soft Lake Superior water (hardness similar to 45 mg/l as CaCO3) to very soft diluted Lake Superior water (hardness similar to 4.5 mg/l). Sulfuric acid was added in some trea...

  4. From yellow perch to round goby: A review of double-crested cormorant diet and fish consumption at three St. Lawrence River colonies, 1999–2013

    USGS Publications Warehouse

    Johnson, James H.; Farquhar, James F; Klindt, Rodger M; Mazzocchi, Irene; Mathers, Alastair

    2015-01-01

    The number of double-crested cormorants (Phalacrocorax auritus) in the upper St. Lawrence River has increased markedly since the early 1990s. In 1999, a binational study was initiated to examine the annual diet composition and fish consumption of cormorants at colonies in the upper river. Since 1999, 14,032 cormorant pellets, collected from May through September each year, have been examined from St. Lawrence River colonies to estimate fish consumption and determine temporal and spatial variation in diet. Seasonal variation in diet composition within a colony was low. Prior to 2006 yellow perch was the primary fish consumed by cormorants in the upper St. Lawrence River. Round goby were first observed in cormorant diets in 2003 and by 2006 were the main fish consumed at two of the three colonies. The time interval it took from the first appearance of round goby in the diet at a colony to when goby were the dominant prey species varied by island, ranging from two to five years. Daily fish consumption at each cormorant colony increased significantly from the pre-round goby to post-round goby period. The mean annual biomass of yellow perch consumed decreased significantly during the post-round goby period at the three colonies. Reduced consumption of yellow perch by cormorants may alleviate suspected localized impacts on perch near some of the larger river colonies.

  5. A Transient Numerical Simulation of Perched Ground-Water Flow at the Test Reactor Area, Idaho National Engineering and Environmental Laboratory, Idaho, 1952-94

    SciTech Connect

    B. R. Orr

    1999-11-01

    Studies of flow through the unsaturated zone and perched ground-water zones above the Snake River Plain aquifer are part of the overall assessment of ground-water flow and determination of the fate and transport of contaminants in the subsurface at the Idaho National Engineering and Environmental Laboratory (INEEL). These studies include definition of the hydrologic controls on the formation of perched ground-water zones and description of the transport and fate of wastewater constituents as they moved through the unsaturated zone. The definition of hydrologic controls requires stratigraphic correlation of basalt flows and sedimentary interbeds within the saturated zone, analysis of hydraulic properties of unsaturated-zone rocks, numerical modeling of the formation of perched ground-water zones, and batch and column experiments to determine rock-water geochemical processes. This report describes the development of a transient numerical simulation that was used to evaluate a conceptual model of flow through perched ground-water zones beneath wastewater infiltration ponds at the Test Reactor Area (TRA).

  6. Development of yellow perch (Perca flavescens) broodstocks: initial characterization of growth and quality traits following grow-out of different stocks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Broodstocks of yellow perch (Perca flavescens) were initiated from fertilized gametes obtained from wild fish taken from the Perquimans River (North Carolina), Choptank River (Maryland), Lake Winnebago (Wisconsin), and Lac du Flambeau (Wisconsin). Populations at these sites were chosen based on the ...

  7. Molecular characterization and sex-specific tissue expression of prolactin, somatolactin and insulin-like growth factor-I in yellow perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The cDNA sequence encoding prolactin (PRL), somatolactin (SL) and insulin-like growth factor-I (IGF-I) genes of the yellow perch were obtained using cloning and sequencing techniques. Brain, pituitary, gill, heart, liver, stomach, kidney, spleen, muscle and gonad tissues were analyzed from both mal...

  8. Yellow perch larval survival studies and the potential effects of an ash storage facility in the Zekiah Swamp watershed, Wicomico River, Maryland

    SciTech Connect

    Buron, W.H.; Pinkney, A.E.; Gurley, J.

    1990-10-01

    Bioassay studies were conducted to determine if leachate from a coal ash depository was a potential factor in reducing abundance of yellow perch spawning stocks in Zekiah Swamp Run, a tributary of the Wicomico River, Maryland. In situ bioassays conducted in Zekiah Swamp Run in 1989 and 1990 using yellow perch yolk-sac larvae resulted in higher mortality upstream and downstream of the ash storage facility relative to reference stations in both years. Similar high mortality was observed at the upstream unaffected site and the downstream potentially affected site, suggesting that poor larval survival in these locations is a system-wide phenomenon. Analysis of water samples for metals, inorganic monomeric-aluminum, volatile organics, pH and measurements of physical parameters did not identify a specific cause for the high mortality observed. Surveys of the abundance and distribution of yellow perch egg strands during spring 1990 revealed that over 1,500 females spawned in a relatively restricted area in the vicinity of the fall line. In contrast to poor larval survival observed at upstream locations above the fall line, good survival was observed in bioassays conducted at a location below the fall line. Results to date are insufficient to establish the specific factors causing high mortality of larval yellow perch above the fall line. However, the ash storage site does not appear to be a contributing factor at the present time.

  9. Transcriptome Analysis and Postprandial Expression of Amino Acid Transporter Genes in the Fast Muscles and Gut of Chinese Perch (Siniperca chuatsi).

    PubMed

    Wu, Ping; Li, Yulong; Cheng, Jia; Chen, Lin; Zeng, Ming; Wu, Yuanan; Wang, Jianhua; Zhang, Jianshe; Chu, Wuying

    2016-01-01

    The characterization of the expression and regulation of growth-related genes in the muscles of Chinese perch is of great interest to aquaculturists because of the commercial value of the species. The transcriptome annotation of the skeletal muscles is a crucial step in muscle growth-related gene analysis. In this study, we generated 52 504 230 reads of mRNA sequence data from the fast muscles of the Chinese perch by using Solexa/Illumina RNA-seq. Twenty-one amino acid transporter genes were annotated by searching protein and gene ontology databases, and postprandial changes in their transcript abundance were assayed after administering a single satiating meal to Chinese perch juveniles (body mass, approximately 100 g), following fasting for 1 week. The gut content of the Chinese perch increased significantly after 1 h and remained high for 6 h following the meal and emptied within 48-96 h. Expression of eight amino acid transporter genes was assayed in the fast muscles through quantitative real-time polymerase chain reaction at 0, 1, 3, 6, 12, 24, 48, and 96 h. Among the genes, five transporter transcripts were markedly up-regulated within 1 h of refeeding, indicating that they may be potential candidate genes involved in the rapid-response signaling system regulating fish myotomal muscle growth. These genes display coordinated regulation favoring the resumption of myogenesis responding to feeding. PMID:27463683

  10. SPERMATOGENESIS IN THE YELLOW PERCH (PERCA FLAVESCENS) - COMPARISON OF RELATIVE GERM CELL TYPES IN 2 SUBPOPULATIONS OF YOUNG-OF-YEAR FISH

    EPA Science Inventory

    An "accelerated growth rate" (AGR) subpopulation of young-of-year yellow perch (Perca flavescens) finished production of mature spermatozoa at least two weeks earlier than a "normal growth rate" (NGR) subpopulation as assessed by semi-quantitative testis histology methods.

  11. Stream function of a perched water table in a sloping gradually layered soil: effect of the soil anisotropy on the flow patterns

    NASA Astrophysics Data System (ADS)

    Barontini, S.; Peli, M.; Ranzi, R.

    2012-04-01

    Perched water tables in the upper soil layers are an important landslides triggering mechanism and the knowledge of their properties is relevant in view of slope stability analyses. During long lasting infiltration processes at low rate, after the imbibition transitories vanished, an important role on the formation of a perched water table is played by the profile of the hydraulic conductivity at saturation Ks. In this paper, as a part of a wider theoretical investigation which aims at describing the effect of gradually decreasing Ks with depth on the steady soil-water flow, the flow field taking place within a perched water table lying on a sloping capillary barrier is described and the corresponding Lagrange stream function is presented. The investigated soil is considered a priori anisotropic. At the bottom of the domain, for the sake of continuity of the total hydraulic head, saturation conditions are assumed. The analytical solution of the flow field was derived with the hypothesis of uniform flow along the slope. The flow patterns revealed that the water infiltrating at the upper surface of the perched water table rapidly leaks toward the underlying soil. The length of the paths is sensitive to the decrease of the conductivity at saturation and it increases with the soil anisotropy. Anyway it still remains limited so that, if the slope is long enough, the uniform flow hypothesis can be considered a reliable approximation of the water flow within a long central branch of the slope.

  12. Transcriptome Analysis and Postprandial Expression of Amino Acid Transporter Genes in the Fast Muscles and Gut of Chinese Perch (Siniperca chuatsi)

    PubMed Central

    Chen, Lin; Zeng, Ming; Wu, Yuanan; Wang, Jianhua; Zhang, Jianshe

    2016-01-01

    The characterization of the expression and regulation of growth-related genes in the muscles of Chinese perch is of great interest to aquaculturists because of the commercial value of the species. The transcriptome annotation of the skeletal muscles is a crucial step in muscle growth-related gene analysis. In this study, we generated 52 504 230 reads of mRNA sequence data from the fast muscles of the Chinese perch by using Solexa/Illumina RNA-seq. Twenty-one amino acid transporter genes were annotated by searching protein and gene ontology databases, and postprandial changes in their transcript abundance were assayed after administering a single satiating meal to Chinese perch juveniles (body mass, approximately 100 g), following fasting for 1 week. The gut content of the Chinese perch increased significantly after 1 h and remained high for 6 h following the meal and emptied within 48–96 h. Expression of eight amino acid transporter genes was assayed in the fast muscles through quantitative real-time polymerase chain reaction at 0, 1, 3, 6, 12, 24, 48, and 96 h. Among the genes, five transporter transcripts were markedly up-regulated within 1 h of refeeding, indicating that they may be potential candidate genes involved in the rapid-response signaling system regulating fish myotomal muscle growth. These genes display coordinated regulation favoring the resumption of myogenesis responding to feeding. PMID:27463683

  13. Radiographic evaluation of perching-joint angles in cockatiels (Nymphicus hollandicus), Hispaniolan Amazon parrots (Amazona ventralis), and barred owls (Strix varia).

    PubMed

    Bonin, Glen; Lauer, Susanne K; Guzman, David Sanchez-Migallon; Nevarez, Javier; Tully, Thomas N; Hosgood, Giselle; Gaschen, Lorrie

    2009-06-01

    Information on perching-joint angles in birds is limited. Joint immobilization in a physiologic perching angle has the potential to result more often in complete restoration of limb function. We evaluated perching-joint angles in 10 healthy cockatiels (Nymphicus hollandicus), 10 Hispaniolan Amazons (Amazona ventralis), and 9 barred owls (Strix varia) and determined intra- and interobserver variability for goniometric measurements in 2 different radiographic projections. Intra- and interobserver variation was less than 7% for all stifle and intertarsal joint measurements but frequently exceeded 10% for the hip-joint measurements. Hip, stifle, and intertarsal perching angles differed significantly among cockatiels, Hispaniolan Amazon parrots, and barred owls. The accuracy of measurements performed on straight lateral radiographic projections with superimposed limbs was not consistently superior to measurements on oblique projections with a slightly rotated pelvis. Stifle and intertarsal joint angles can be measured on radiographs by different observers with acceptable variability, but intra- and interobserver variability for hip-joint-angle measurements is higher. PMID:19673455

  14. Display of ISKNV orf086 protein on the surface of Aeromonas hydrophila and its immunogenicity in Chinese perch (Siniperca chuatsi).

    PubMed

    Fu, Xiaozhe; Lin, Qiang; Liu, Lihui; Liang, Hongru; Huang, Zhibin; Li, Ningqiu

    2016-09-01

    Co-infection with infectious spleen and kidney necrosis virus (ISKNV) and Aeromonas hydrophila is becoming ever more widespread in Chinese perch (Siniperca chuatsi) aquaculture industry, so that it's necessary to develop the combined vaccine against ISKNV and A. hydrophila disease. The surface display of heterologous on bacteria using anchoring motifs from outer membranes proteins has already been explored as an effective delivery system of viral antigens. In present study, the ISKNV orf086 gene, which is verified as a protective antigen, was inserted into ompA gene cassette of A. hydrophila GYK1 strain by homologous recombination. And an ompA-orf086 fusion A. hydrophila mutant strain K28 was constructed. Then the ISKNV orf086 was verified to express on the surface of A. hydrophila K28 by RT-PCR, western blot and indirect immunofluorescence assay. Next, Chinese perch were intraperitoneally inoculated with formalin inactivated A. hydrophila k28 emulsified with ISA763 adjuvant with a dose of 9 × 10(8) CFU per fish. Transcriptional analysis of non-specific and specific immune related genes revealed that the expression levels of IRF-7, IRAK1, Mx, Viperin, Lysozyme and IgM were strongly up-regulated in Chinese perch post-inoculation. In addition, specific antibodies were detected by ELISA, and the results showed that antibody titer against ISKNV or A. hydrophila reached the highest with 1:800 or 1:1200 on 14dpv, respectively. Lymphocyte proliferation were detected by MTT methods, and the results showed that the SI values of AH-K28 vaccinated group to three different stimulators were significantly higher than those of control group. At last, protective efficacy were determined by challenge trials. The cumulative mortality rates of vaccinated groups were significantly lower than the control one (P < 0.05) after ISKNV or A. hydrophila challenge, and the relative percentage survival (RPS) value was 73.3% and 60%, respectively. This system provides a novel approach to

  15. Welfare of organic laying hens kept at different indoor stocking densities in a multi-tier aviary system. II: live weight, health measures and perching.

    PubMed

    Steenfeldt, S; Nielsen, B L

    2015-09-01

    Multi-tier aviary systems, where conveyor belts below the tiers remove the manure at regular intervals, are becoming more common in organic egg production. The area on the tiers can be included in the net area available to the hens (also referred to as usable area) when calculating maximum indoor stocking densities in organic systems within the EU. In this article, results on live weight, health measures and perching are reported for organic laying hens housed in a multi-tier system with permanent access to a veranda and kept at stocking densities (D) of 6, 9 and 12 hens/m2 available floor area, with concomitant increases in the number of hens per trough, drinker, perch and nest space. In a fourth treatment, access to the top tier was blocked reducing vertical, trough, and perch access at the lowest stocking density (D6x). In all other aspects than stocking density, the experiment followed the EU regulations on the keeping of organic laying hens. Hen live weight, mortality and foot health were not affected by the stocking densities used in the present study. Other variables (plumage condition, presence of breast redness and blisters, pecked tail feathers, and perch use) were indirectly affected by the increase in stocking density through the simultaneous reduction in access to other resources, mainly perches and troughs. The welfare of the hens was mostly affected by these associated constraints, despite all of them being within the allowed minimum requirements for organic production in the EU. Although the welfare consequences reported here were assessed to be moderate to minor, it is important to take into account concurrent constraints on access to other resources when higher stocking densities are used in organic production. PMID:25990629

  16. Planet Ocean

    NASA Astrophysics Data System (ADS)

    Afonso, Isabel

    2014-05-01

    A more adequate name for Planet Earth could be Planet Ocean, seeing that ocean water covers more than seventy percent of the planet's surface and plays a fundamental role in the survival of almost all living species. Actually, oceans are aqueous solutions of extraordinary importance due to its direct implications in the current living conditions of our planet and its potential role on the continuity of life as well, as long as we know how to respect the limits of its immense but finite capacities. We may therefore state that natural aqueous solutions are excellent contexts for the approach and further understanding of many important chemical concepts, whether they be of chemical equilibrium, acid-base reactions, solubility and oxidation-reduction reactions. The topic of the 2014 edition of GIFT ('Our Changing Planet') will explore some of the recent complex changes of our environment, subjects that have been lately included in Chemistry teaching programs. This is particularly relevant on high school programs, with themes such as 'Earth Atmosphere: radiation, matter and structure', 'From Atmosphere to the Ocean: solutions on Earth and to Earth', 'Spring Waters and Public Water Supply: Water acidity and alkalinity'. These are the subjects that I want to develop on my school project with my pupils. Geographically, our school is located near the sea in a region where a stream flows into the sea. Besides that, our school water comes from a borehole which shows that the quality of the water we use is of significant importance. This project will establish and implement several procedures that, supported by physical and chemical analysis, will monitor the quality of water - not only the water used in our school, but also the surrounding waters (stream and beach water). The samples will be collected in the borehole of the school, in the stream near the school and in the beach of Carcavelos. Several physical-chemical characteristics related to the quality of the water will

  17. Is the pirate really a ghost? Evidence for generalized chemical camouflage in an aquatic predator, pirate perch Aphredoderus sayanus.

    PubMed

    Resetarits, William J; Binckley, Christopher A

    2013-05-01

    Camouflage occupies a central role in arsenals of both predators and prey and invokes visions of organisms possessing specific characteristics or altering their shape, color, or behavior to blend into the visual background or confound identification. However, many organisms use modalities other than vision. Chemical communication is particularly important in aquatic systems, and chemicals cues are used by a broad array of colonizing organisms to recognize and avoid risky habitats. Here we describe a habitat selection experiment with aquatic beetles and summarize results of 11 experiments involving colonizing beetles and ovipositing tree frogs that provide evidence that pirate perch Aphredoderus sayanus are chemically camouflaged with respect to a diverse array of prey organisms. We believe this to be the first example of a predator possessing a generalized chemical camouflage effective against a broad array of prey organisms, and we suggest that it may constitute a novel weapon in the predator-prey arms race. PMID:23594551

  18. Susceptibility of Chinese Perch Brain (CPB) Cell and Mandarin Fish to Red-Spotted Grouper Nervous Necrosis Virus (RGNNV) Infection.

    PubMed

    Tu, Jiagang; Chen, Wenjie; Fu, Xiaozhe; Lin, Qiang; Chang, Ouqin; Zhao, Lijuan; Lan, Jiangfeng; Li, Ningqiu; Lin, Li

    2016-01-01

    Nervous necrosis virus (NNV) is the causative agent of viral encephalopathy and retinopathy (VER), a neurological disease responsible for high mortality of fish species worldwide. Taking advantage of our established Chinese perch brain (CPB) cell line derived from brain tissues of Mandarin fish (Siniperca chuatsi), the susceptibility of CPB cell to Red-Spotted Grouper nervous necrosis virus (RGNNV) was evaluated. The results showed that RGNNV replicated well in CPB cells, resulting in cellular apoptosis. Moreover, the susceptibility of Mandarin fish to RGNNV was also evaluated. Abnormal swimming was observed in RGNNV-infected Mandarin fish. In addition, the cellular vacuolation and viral particles were also observed in brain tissues of RGNNV-infected Mandarin fish by Hematoxylin-eosin staining or electronic microscopy. The established RGNNV susceptible brain cell line from freshwater fish will pave a new way for the study of the pathogenicity and replication of NNV in the future. PMID:27213348

  19. Habitat-dependent geographical variation in ontogenetic allometry of the shiner perch Cymatogaster aggregata Gibbons (Teleostei: Embiotocidae).

    PubMed

    Woods, P J

    2007-09-01

    Studies of intraspecific morphological variation in fishes have traditionally focused on freshwater rather than marine species. In addition, such studies typically focus on adults, although causes and intensities of selective pressures most likely vary through an individual's lifetime. In this study, body and head shape of a marine species, shiner perch Cymatogaster aggregata Gibbons were compared among localities along the Pacific Northwest coast of North America. Evidence was found for intraspecific variation in ontogenetic allometry, and for a closer correlation of body shape with environment rather than geographical proximity. This correlation with environment was more evident in younger fish, thereby demonstrating the importance of analysing multiple life stages. A common garden experiment suggests both environmental and genetic bases for the observed differences. Recognizing intraspecific ecomorphological complexity and its specificity to habitat and/or life stage can have important consequences for understanding the role of local adaptation and population dynamics in macroecology. PMID:17714296

  20. Susceptibility of Chinese Perch Brain (CPB) Cell and Mandarin Fish to Red-Spotted Grouper Nervous Necrosis Virus (RGNNV) Infection

    PubMed Central

    Tu, Jiagang; Chen, Wenjie; Fu, Xiaozhe; Lin, Qiang; Chang, Ouqin; Zhao, Lijuan; Lan, Jiangfeng; Li, Ningqiu; Lin, Li

    2016-01-01

    Nervous necrosis virus (NNV) is the causative agent of viral encephalopathy and retinopathy (VER), a neurological disease responsible for high mortality of fish species worldwide. Taking advantage of our established Chinese perch brain (CPB) cell line derived from brain tissues of Mandarin fish (Siniperca chuatsi), the susceptibility of CPB cell to Red-Spotted Grouper nervous necrosis virus (RGNNV) was evaluated. The results showed that RGNNV replicated well in CPB cells, resulting in cellular apoptosis. Moreover, the susceptibility of Mandarin fish to RGNNV was also evaluated. Abnormal swimming was observed in RGNNV-infected Mandarin fish. In addition, the cellular vacuolation and viral particles were also observed in brain tissues of RGNNV-infected Mandarin fish by Hematoxylin-eosin staining or electronic microscopy. The established RGNNV susceptible brain cell line from freshwater fish will pave a new way for the study of the pathogenicity and replication of NNV in the future. PMID:27213348

  1. Polychlorinated biphenyls and Hudson River white perch: implications for population-level ecological risk assessment and risk management.

    PubMed

    Barnthouse, Lawrence W; Glaser, David; DeSantis, Liane

    2009-07-01

    Risk assessments and risk management decisions concerning risks to wild fish populations resulting from exposures to polychlorinated biphenyls (PCBs) and related chemicals have been based primarily on observations of effects of chemicals on individual organisms. Although the development and application of population-level ecological risk-assessment methods is proceeding at a rapid pace, the organism-level approach is still being justified by arguments that population-level ecological risk assessment is in an early stage of development and has not been shown to be reliable. This article highlights the importance of including population-level effects in risk-management decision-making, by examining the effects of exposures to PCBs on fish populations inhabiting the Hudson River, New York, USA, a system in which data have been collected for approximately 30 y concerning both concentrations of PCBs in sediment and fish tissue and the abundance and reproduction of exposed fish populations. We previously tested hypotheses concerning the effects of PCBs on the striped bass population of the Hudson River, and found that the available data conflicted with all of these hypotheses. Here, we report results of similar analyses of effects of historic PCB exposures on the Hudson River white perch population, using an extended data set that recently became available. As with striped bass, we found no correlation between maternal PCB tissue concentrations and any measure of reproductive success in Hudson River white perch during the 30-y period covered by the data set. Together with results of studies performed on fish populations exposed to PCBs at other sites, our results clearly demonstrate that physiological and genetic adaptation, biological compensation, and other ecological processes influence responses of fish populations to PCB exposures and should be considered in risk management decision-making. PMID:20050031

  2. The effect of urbanization in an arid region: Formation of a perched water table that causes environmental damages

    NASA Astrophysics Data System (ADS)

    Karnieli, A.; Issar, A.; Wolf, M.

    1984-03-01

    Construction in a new neighborhood in the israeli town of Dimona, situated in an arid region in the south of the country (150 mm average annual rainfall), resulted in a rise in groundwater levels during the subsequent rainy seasons This caused flooding of shelter basements, soil sliding, and sagging which permanently damaged walls and buildings The neighborhood had been built on continental sands and marls blanketed by loess, on a valley slope near a rocky anticlinal dip-slope Subsurface studies, using piezometer holes and groundwater analyses, revealed the presence of sand lenses alternating with plastic marls, which act as seasonal aquifers with perched water tables Groundwaters obtain high SO{4/-2} and Cl- corrosivity through contact with these nonflushed marls of the Neogene valley fill (Hazeva Formation) The reasons for the rising of groundwater were found to be (a) artificial interference with the natural (pre-construction) drainage system—interception of the hillside runoff by building plots, roads, etc, (b) partial denudation of the loess blanket, increasing the local infiltration and the build-up of local, perched water tables, and (c) corrosion of concrete and steel pipelines, as well as foundations, by prolonged contact with corrosive groundwater, resulting in haphazard but massive leakage Guidelines are proposed for an environmental improvement plan, which would include terracing and planting of the watershed above town to increase evapotranspiration, lowering of the water table by pumping, and diverting the water to suburban parks (groves of saltresistant trees), and replacement of steel and cement pipes by a non-corrodable plastic pipe system

  3. Cardiac oxygen limitation during an acute thermal challenge in the European perch: effects of chronic environmental warming and experimental hyperoxia.

    PubMed

    Ekström, Andreas; Brijs, Jeroen; Clark, Timothy D; Gräns, Albin; Jutfelt, Fredrik; Sandblom, Erik

    2016-08-01

    Oxygen supply to the heart has been hypothesized to limit cardiac performance and whole animal acute thermal tolerance (CTmax) in fish. We tested these hypotheses by continuously measuring venous oxygen tension (Pvo2) and cardiovascular variables in vivo during acute warming in European perch (Perca fluviatilis) from a reference area during summer (18°C) and a chronically heated area (Biotest enclosure) that receives warm effluent water from a nuclear power plant and is normally 5-10°C above ambient (24°C at the time of experiments). While CTmax was 2.2°C higher in Biotest compared with reference perch, the peaks in cardiac output and heart rate prior to CTmax occurred at statistically similar Pvo2 values (2.3-4.0 kPa), suggesting that cardiac failure occurred at a common critical Pvo2 threshold. Environmental hyperoxia (200% air saturation) increased Pvo2 across temperatures in reference fish, but heart rate still declined at a similar temperature. CTmax of reference fish increased slightly (by 0.9°C) in hyperoxia, but remained significantly lower than in Biotest fish despite an improved cardiac output due to an elevated stroke volume. Thus, while cardiac oxygen supply appears critical to elevate stroke volume at high temperatures, oxygen limitation may not explain the bradycardia and arrhythmia that occur prior to CTmax Acute thermal tolerance and its thermal plasticity can, therefore, only be partially attributed to cardiac failure from myocardial oxygen limitations, and likely involves limiting factors on multiple organizational levels. PMID:27280433

  4. An update of the distribution of selected radiochemical and chemical constituents in perched ground water, Idaho National Laboratory, Idaho, Emphasis 1999-2001

    USGS Publications Warehouse

    Davis, Linda C.

    2006-01-01

    Radiochemical and chemical wastes generated at facilities at the Idaho National Laboratory (INL) were discharged since 1952 to infiltration ponds at the Reactor Technology Complex (RTC) (known as the Test Reactor Area [TRA] until 2005), and the Idaho Nuclear Technology and Engineering Center (INTEC) and buried at the Radioactive Waste Management Complex (RWMC). Disposal of wastewater to infiltration ponds and infiltration of surface water at waste burial sites resulted in formation of perched ground water in basalts and in sedimentary interbeds above the Snake River Plain aquifer. Perched ground water is an integral part of the pathway for waste-constituent migration to the aquifer. The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Energy, maintains ground-water monitoring networks at the INL to determine hydrologic trends, and to monitor the movement of radiochemical and chemical constituents in wastewater discharged from facilities to both perched ground water and the aquifer. This report presents an analysis of water-quality and water-level data collected from wells completed in perched ground water at the INL during 1999-2001, and summarizes historical disposal data and water-level-and water-quality trends. At the RTC, tritium, strontium-90, cesium-137, dissolved chromium, chloride, sodium, and sulfate were monitored in shallow and deep perched ground water. In shallow perched ground water, no tritium was detected above the reporting level. In deep perched ground water, tritium concentrations generally decreased or varied randomly during 1999-2001. During October 2001, tritium concentrations ranged from less than the reporting level to 39.4?1.4 picocuries per milliliter (pCi/mL). Reportable concentrations of tritium during July-October 2001 were smaller than the reported concentrations measured during July-December 1998. Tritium concentrations in water from wells at the RTC were likely affected by: well's distance from the

  5. Ocean optics

    SciTech Connect

    Spinard, R.W.; Carder, K.L.; Perry, M.J.

    1994-12-31

    This volume is the twenty fifth in the series of Oxford Monographs in Geology and Geophysics. The propagation off light in the hydra-atmosphere systems is governed by the integral-differential Radiative Transfer Equation (RTE). Closure and inversion are the most common techniques in optical oceanography to understand the most basic principles of natural variability. Three types of closure are dealt with: scale closure, experimental closure, and instrument closure. The subject is well introduced by Spinard et al. in the Preface while Howard Gordon in Chapter 1 provides an in-depth introduction to the RTE and its inherent problems. Inherent and apparent optical properties are dealt with in Chapter 2 by John Kirk and the realities of optical closure are presented in the following chapter by Ronald Zaneveld. The balance of the papers in this volume is quite varied. The early papers deal in a very mathematical manner with the basics of radiative transfer and the relationship between inherent and optical properties. Polarization of sea water is discussed in a chapter that contains a chronological listing of discoveries in polarization, starting at about 1000 AD with the discovery of dichroic properties of crystals by the Vikings and ending with the demonstration of polarotaxis in certain marine organisms by Waterman in 1972. Chapter 12 on Raman scattering in pure water and the pattern recognition techniques presented in Chapter 13 on the optical effects of large particles may be of relevance to fields outside ocean optics.

  6. Application of random amplified polymorphic DNA (RAPD) analysis for identification of grouper (Epinephelus guaza), wreck fish (Polyprion americanus), and Nile perch (Lates niloticus) fillets.

    PubMed

    Asensio, Luis; González, Isabel; Fernández, Alicia; Rodríguez, Miguel A; Lobo, Esther; Hernández, Pablo E; García, Teresa; Martín, Rosario

    2002-02-01

    A random amplified polymorphic DNA (RAPD) method was developed for the specific identification of grouper (Epinephelus guaza), wreck fish (Polyprion americanus), and Nile perch (Lates niloticus) fillets. Using two different reaction primers (S1 and L1), RAPD analysis produced clear fingerprints from which the three fish species could be easily identified. This approach is rapid and reliable and offers the potential to detect fraudulent or unintentional mislabeling of these species in routine seafood authentication analysis. PMID:11848581

  7. Depletion of the chloramine-T marker residue, para-toluenesulfonamide, from skin-on fillet tissue of hybrid striped bass, rainbow trout, and yellow perch

    USGS Publications Warehouse

    Meinertz, J.R.; Stehly, G.R.; Greseth, Shari L.; Gaikowski, M.P.; Gingerich, W.H.

    2004-01-01

    Waterborne exposure to n-sodium-n-chloro-p-toluenesulfonamide (chloramine-T) is an effective treatment for controlling fish mortalities caused by bacterial gill disease (BGD). Currently, data are being generated to gain United States Food and Drug Administration (FDA) approval for the use of chloramine-T in aquaculture. As part of the data required for an approval, depletion of the chloramine-T marker residue (para-toluenesulfonamide [p-TSA]) from the edible fillet tissue of exposed fish must be determined. Hybrid striped bass (Morone saxatilis??Morone chrysops; mean weight 357 g), rainbow trout (Oncorhynchus mykiss; mean weight 457 g), and yellow perch (Perca flavescens; mean weight 144 g) were exposed to 20 mg/l of chloramine-T for 60 min on 4 consecutive days (the most aggressive treatment expected for approved use in the United States). Groups of fish (n=15 or 19) were sampled immediately after the last treatment and periodically through 48 or 168 h after the treatment phase. Duplicate subsamples of skin-on fillet tissue from each fish were analyzed for p-TSA. Mean p-TSA concentrations in fillet tissue from fish sampled immediately after the last treatment were 142 ng/g (hybrid striped bass), 97 ng/g (rainbow trout), and 150 ng/g (yellow perch). Mean p-TSA concentrations at terminal sample times were 94 (168 h; hybrid striped bass), 74 (48 h; rainbow trout), and 35 ng/g (168 h; yellow perch). The half-lives of p-TSA in fillet tissue from fish near or at market size were 11.4 (hybrid striped bass), 4.3 (rainbow trout), and 3.2 days (yellow perch).

  8. Safety of oxytetracycline (Terramycin TM-100F) administered in feed to hybrid striped bass, walleyes, and yellow perch

    USGS Publications Warehouse

    Gaikowski, M.P.; Wolf, J.C.; Schleis, S.M.; Gingerich, W.H.

    2003-01-01

    Oxytetracycline (Terramycin TM-100F, a medicated premix containing oxytetracycline at 220 g/kg) is approved in the United States to control certain systemic bacterial diseases of salmon and catfish when fed at a rate of 55-82.5 mg per kilogram of bodyweight per day for 10 d. Although oxytetracycline may also control certain systemic bacterial infections in coolwater or scaled warmwater fish, no safety data for such species are available. Our objective was to determine the safety of oxytetracycline administered in feed at nominal doses of 0, 82.5, 248, or 413 mg??kg-1??d-1 to yellow perch Perca flavescens and hybrid striped bass (striped bass Morone saxatilis x white bass M. chrysops) for 10 d and to walleye Sander vitreus (formerly Stizostedion vitreum) for 20 d. Yellow perch and hybrid striped bass consumed 50% to 100% of the diet, whereas walleye feed consumption was occasionally less than 50% of the diet. Feed or fecal material was present in the gastrointestinal tract of all necropsied walleyes except for one control fish. The single growth effect was that hybrid striped bass offered a nominal dose of 413 mg??kg-1??d-1 were significantly smaller than untreated controls. Oxytetracycline-related histopathological findings were limited to walleyes and were of low severity. The histopathological findings included decreased hematopoietic-lymphopoietic (H&L) tissue in the anterior kidneys, diffuse hyperplasia of the gill filament epithelium, and a decreased prevalence of fish with eosinophilic droplets in their renal tubular epithelial cells. Although the incidence of decreased H&L tissue tended to increase in proportion to oxytetracycline dose, this finding was statistically significant only for fish that received a nominal dose of 413 mg??kg-1??d-1. Given the pathogenicity of the types of bacteria that are controlled by oxytetracycline treatment and the long history of its use in major aquaculture species, the relative risk of the minor oxytetracycline

  9. Mapping Weak, Altered Zones and Perched Water With Aerogeophysical Measurements at Mount Adams, Washington: Implications for Volcanic Instability

    NASA Astrophysics Data System (ADS)

    Finn, C. A.; Deszcz-Pan, M.; Anderson, E. D.; Horton, R.

    2006-12-01

    Hydrothermally altered rocks, particularly if water saturated, can weaken stratovolcanoes. This increases the potential for catastrophic sector collapses that can lead to destructive debris flows. Evaluating the hazards associated with such alteration is difficult, because alteration has been mapped on few active volcanoes and the distribution and intensity of subsurface alteration and location of perched water tables are largely unknown on any active volcano. At Mount Adams, some Holocene debris flows contain abundant hydrothermal minerals derived from collapse of an altered edifice. Intense hydrothermal alteration can significantly reduce the resistivity (from hundreds to tens ohm-m) and magnetization of volcanic rocks. These changes can be identified with helicopter electromagnetic and magnetic measurements and visualized in 3D. 100 m is the greatest depth that the lowest frequency electromagnetic data could penetrate into the low resistivity, altered zones; outside the altered zones, the depth of penetration was up to 300 m. Total-field magnetic data can detect magnetization variations to several thousand meters depth. Electromagnetic and magnetic data, combined with geological mapping and rock property measurements, indicate the presence of appreciable thicknesses of hydrothermally altered rock in the central core of Mount Adams north of the summit. We identify steep cliffs at the western edge of this zone as the likely source for future large debris flows. Water, and perhaps melted ice, is needed as a lubricant to transform debris avalanches into lahars. Therefore, knowing the distribution of both is important for hazard assessments. Over the low resistivity summit, the electromagnetic data detected ice with a thickness of 0 to about 80 m and an estimated volume of up to 0.1 km3. Over resistive ridges ice thicknesses could not be determined. The electromagnetic data also identified perched water tables in the brecciated core of the upper 300 m of the volcano

  10. Change in diel catchability of young-of-year yellow perch associated with establishment of dreissenid mussels

    USGS Publications Warehouse

    Stapanian, Martin A.; Kocovsky, Patrick M.; Adams, Jean V.

    2009-01-01

    1. Non-native mussels have increased water clarity in many lakes and streams in North America and Europe. Diel variation in catchability of some fish species has been linked to visibility during survey trawls (used to measure escapement). 2. Water clarity increased in nearshore areas of western Lake Erie by the early 1990s, following passage of legislation in 1972 to improve water quality (e.g. reduce phosphorus loading) and the invasion of dreissenid mussels (Dreissena spp.) beginning in 1987. 3. We hypothesised that increased water clarity in Lake Erie resulted in decreased catchability of young-of-year (age-0) yellow perch (Perca flavescens Mitchill) during daylight compared to during night. We used a two-tiered modelling approach to test this hypothesis on the ratio (R) of catch per hour (CPH) during night to CPH during daylight in bottom trawl surveys conducted during 1961-2005. 4. First, we examined seven a priori models. The first model, the 'null' model, represented no change in R over time. Three more models tested whether the timing of the change in R was associated with passage of water quality legislation only, dreissenids only (two-period models) and both legislation and dreissenids (three-period models). Three additional models included a 3-year lag before the effects of legislation, dreissenids or both occurred. Secondly, all possible two- and three-period models with a minimum of 2 years per time period were explored a posteriori. The a posteriori procedure determined the temporal transitions to higher R that were best supported by the data, without regard to a priori hypotheses. 5. Night CPH was greater than daylight CPH in 3 of 11 years during 1961-72, in 10 of 15 years during 1973-87, and in 14 of 18 years during 1988-2005. During 1991-2005 night CPH exceeded daylight CPH in all years except one, and night CPH was more than twice daylight CPH in 10 years during this period. 6. The best a priori model had two periods, with a break between 1990 and

  11. Protein encoded by ORF093 is an effective vaccine candidate for infectious spleen and kidney necrosis virus in Chinese perch Siniperca chuatsi.

    PubMed

    Li, Ningqiu; Fu, Xiaozhe; Guo, Huizhi; Lin, Qiang; Liu, Lihui; Zhang, Defeng; Fang, Xiang; Wu, Shuqin

    2015-01-01

    Infectious spleen and kidney necrosis virus (ISKNV) is the causative agent of a disease causing high mortality and economic losses in Chinese perch, Siniperca chuatsi in China. Little information about the antigenicity of ISKNV proteins is available. In this study the ORF093 gene of ISKNV was cloned into the prokaryotic expression vector pET32a(+) and eukaryotic expression vector pcDNA3.1(+), and designated as pET-093 and pcDNA-093, respectively. A recombinant 51-kDa protein was detected in Escherichia coli BL21 (harboring pET-093) after IPTG inducement. Polyclonal antibodies were raised in rabbits against the purified ORF093 protein and the reaction of the antibodies was confirmed by western blotting using the purified recombinant protein. Expression of the pcDNA-093 in muscle tissue of vaccinated fish was confirmed by western blotting. The protection efficacy of ORF093 was investigated and results showed that cumulative mortality of Chinese perch was significant differences between immune groups and control (P<0.05) after ISKNV challenge, and the RPS value of 093 recombinant protein, pcDNA093 and pcDNA093+MCP was 47%, 50% and 57%. The results suggested that ORF093 is an effective vaccine candidate for ISKNV and it can be used in the control of ISKNV disease in Chinese perch. PMID:25462463

  12. Studying ocean acidification in the Arctic Ocean

    USGS Publications Warehouse

    Robbins, Lisa

    2012-01-01

    The U.S. Geological Survey (USGS) partnership with the U.S. Coast Guard Ice Breaker Healey and its United Nations Convention Law of the Sea (UNCLOS) cruises has produced new synoptic data from samples collected in the Arctic Ocean and insights into the patterns and extent of ocean acidification. This framework of foundational geochemical information will help inform our understanding of potential risks to Arctic resources due to ocean acidification.

  13. Tidally discontinuous ocean forcing in bar-built estuaries: The interaction of tides, infragravity motions, and frictional control

    NASA Astrophysics Data System (ADS)

    Williams, M. E.; Stacey, M. T.

    2016-01-01

    Shallow, bar-built estuaries on wave-dominated coasts in Mediterranean climates experience an intermittent connection to the ocean. In the presence of low streamflow, their inlets may completely close as a result of nearshore sand transport, but even in the open condition, these inlets remain constricted. Extensive field measurements in the highly salt-stratified Pescadero estuary in northern California show that the shallow mouth causes these estuaries to experience discontinuous tidal forcing. While the ocean and estuary are fully connected with near-equal water levels, tidal velocities are slow but infragravity motions in the nearshore induce large velocity oscillations within the estuary. As the ocean tide falls, infragravity forcing is cut off, because the estuarine mouth is perched above the low tide ocean water level, and ebbing velocities are set by bed friction. Observations reveal this oscillation between ocean-forced and frictionally controlled conditions characterizes and sets estuarine hydrodynamics. Additional wave setup of the lagoon emphasizes the dependence of these estuaries on nearshore ocean conditions, but the diurnal or semidiurnal retreat of the ocean below the mouth cuts off this nearshore influence so it too is tidally varying. Here we present detailed observations and a framework for understanding hydrodynamics in small, shallow bar-built estuaries.

  14. Catchment-Scale Conservation Units Identified for the Threatened Yarra Pygmy Perch (Nannoperca obscura) in Highly Modified River Systems

    PubMed Central

    Brauer, Chris J.; Unmack, Peter J.; Hammer, Michael P.; Adams, Mark; Beheregaray, Luciano B.

    2013-01-01

    Habitat fragmentation caused by human activities alters metapopulation dynamics and decreases biological connectivity through reduced migration and gene flow, leading to lowered levels of population genetic diversity and to local extinctions. The threatened Yarra pygmy perch, Nannoperca obscura, is a poor disperser found in small, isolated populations in wetlands and streams of southeastern Australia. Modifications to natural flow regimes in anthropogenically-impacted river systems have recently reduced the amount of habitat for this species and likely further limited its opportunity to disperse. We employed highly resolving microsatellite DNA markers to assess genetic variation, population structure and the spatial scale that dispersal takes place across the distribution of this freshwater fish and used this information to identify conservation units for management. The levels of genetic variation found for N. obscura are amongst the lowest reported for a fish species (mean heterozygosity of 0.318 and mean allelic richness of 1.92). We identified very strong population genetic structure, nil to little evidence of recent migration among demes and a minimum of 11 units for conservation management, hierarchically nested within four major genetic lineages. A combination of spatial analytical methods revealed hierarchical genetic structure corresponding with catchment boundaries and also demonstrated significant isolation by riverine distance. Our findings have implications for the national recovery plan of this species by demonstrating that N. obscura populations should be managed at a catchment level and highlighting the need to restore habitat and avoid further alteration of the natural hydrology. PMID:24349405

  15. {sup 32}P-postlabeling analysis of DNA adducts in wild perch (Perca fluviatilis) and northern pike (Esox lucius)

    SciTech Connect

    Ericson, G.; Liewenborg, B.; Balk, L.

    1995-12-31

    Several previous studies have demonstrated a correlation between high concentrations of sediment-associated contaminants and elevated levels of aromatic/hydrophobic DNA adduct levels in the liver of benthic fish species. In the present study DNA adducts was analyzed in coastal populations of perch (Perca fluviatilis) and northern pike (Esox lucius). Fish were sampled from four different sites in a gradient from a heavily industrialized area at the Swedish Baltic coast. For comparison, fish were also caught in a reference area with no main industries and comparatively low levels of contaminants of anthropogenic origin. DNA was extracted from liver and several extrahepatic tissues and DNA adducts were analyzed by the nuclease PI version of the {sup 32}P-postlabeling assay. The autoradiograms derived from DNA of fish from the contaminated sites showed several adduct spots not visible on the autoradiograms derived from fish from the reference area. Total adduct levels were significantly elevated in several tissues in fish from contaminated sites compared to the reference area. Species and tissue-specific differences in adduct levels and the use of {sup 32}P-postlabeling analysis of DNA adducts as a biomarker to monitor the presence and effects of genotoxic chemicals in the aquatic environment are discussed.

  16. Larval dispersal underlies demographically important inter-system connectivity in a Great Lakes yellow perch (Perca flavescens) population

    USGS Publications Warehouse

    Brodnik, Reed M.; Fraker, Michael E.; Anderson, Eric J.; Carreon-Martinez, Lucia; DeVanna, Kristen M.; Heath, Dan D.; Reichert, Julie M.; Roseman, Edward F.; Ludsin, Stuart A.

    2016-01-01

    Ability to quantify connectivity among spawning subpopulations and their relative contribution of recruits to the broader population is a critical fisheries management need. By combining microsatellite and age information from larval yellow perch (Perca flavescens) collected in the Lake St. Clair – Detroit River system (SC-DRS) and western Lake Erie with a hydrodynamic backtracking approach, we quantified subpopulation structure, connectivity, and contributions of recruits to the juvenile stage in western Lake Erie during 2006-2007. After finding weak (yet stable) genetic structure between the SC-DRS and two western Lake Erie subpopulations, microsatellites also revealed measurable recruitment of SC-DRS larvae to the juvenile stage in western Lake Erie (17-21% during 2006-2007). Consideration of pre-collection larval dispersal trajectories, using hydrodynamic backtracking, increased estimated contributions to 65% in 2006 and 57% in 2007. Our findings highlight the value of complementing subpopulation discrimination methods with hydrodynamic predictions of larval dispersal by revealing the SC-DRS as a source of recruits to western Lake Erie and also showing that connectivity through larval dispersal can affect the structure and dynamics of large-lake fish populations.

  17. Comparative study of lead accumulation in different organs of perch (Perca fluviatilis) and its intestinal parasite Acanthocephalus lucii

    SciTech Connect

    Sures, B.; Taraschewski, H.; Jackwerth, E. )

    1994-02-01

    Lead is known as an important aquatic contaminant with different toxic effects on various organisms. Considerable data are available on lead in aquatic ecosystems including water, sediments, fishes and invertebrates. Until now, no quantitative investigations have been published comparing the heavy metal (Pb, Cd, Hg) content in parasites with that in their final or intermediate hosts, although such parasites are very prevalent in many fish and invertebrate populations. Only Brown and Pascoe (1989) reported that the amphipod Gammarus pulex parasitized with the acanthocephalan Pomphorhynchus laevis was two or three times more sensitive to cadmium at low exposure concentrations (2.1 [mu]g 1[sup [minus]1]) than uninfected conspecifics. The objective of the present study was to combine trace analytical and parasitological methods to investigate lead concentrations in different tissues (muscle, liver and intestine) of perch (Perca fluviatilis) and in the palaeacanthocephalan Acanthocephalus lucii parasitizing the intestine of these fishes. The fish were caught in the river Ruhr which drains the densely populated and industrialized Ruhr-district. 14 refs., 2 tabs.

  18. Late-Pleistocene and Holocene remains of Hysterocarpus traski (Tule Perch) from Clear Lake, California, and inferred Holocene temperature fluctuations

    USGS Publications Warehouse

    Casteel, R.W.; Adam, D.P.; Sims, J.D.

    1977-01-01

    The remains of scales of Hysterocarpus traski Gibbons (Tule perch) were found throughout a 27.44-m core from Clear Lake. Most scales occurred between the mud surface and deposits approximately 11,000 years old. Changes in growth rates of the animals were examined by measuring scale annuli and applying an empirically established regression of fish length on scale radius. The data indicate a pattern of accelerating growth rates, reaching a peak between {reversed tilde equals}4000 and 2800 BP. After {reversed tilde equals}2800 BP, growth rates decline markedly. Because the growth rates of these animals are essentially dependent on temperature, the changes observed in the patterns of growth probably reflect changes in climate in the northern Coast Range. The general pattern of inferred temperature increase during the early and middle Holocene, ending between {reversed tilde equals}4000 and 2800 BP, is consistent with evidence from tree-line studies and palynology indicating higher temperatures in parts of the western United States during this period. ?? 1977.

  19. Bioaccumulation and assimilation efficiency of hexachlorobiphenyl (HCBP) in yellow perch as a function of both fish and diet lipid level

    SciTech Connect

    Dabrowska, H.; Fisher, S.W.

    1995-12-31

    Evaluation of factors which control the uptake and bioaccumulation of lipophilic contaminants by fish and terrestrial animals is critical to the implementation of bioenergetics-based food web models used to ecological risk assessment. Among these factors some of the most important are feeding and egestion rates, lipid content of both an animal and its diet as well as chemical and food assimilation efficiencies. In this study, groups of juvenile yellow perch were fed lab-formulated low and high-lipid diet for a period of 3 months in order to establish a significant difference in body total lipid content. After that period fish were divided into subgroups and offered either low or high-lipid diet spiked with {sup 14}C-HCBP. Fish were fed contaminated diet for 1 month followed by 1 month of elimination period. Feeding rates during both periods were quantified. Fish (5 specimens) were collected at the beginning of the dietary exposure and every 10 days thereafter and analyzed for {sup 14}C-HCBP and lipid content. Bioaccumulation and assimilation efficiency related to the lipid level in fish and in the diets as well as to contaminant concentration in the diet will be discussed.

  20. Genetic damage induced by lead chloride in different tissues of fresh water climbing perch Anabas testudineus (Bloch).

    PubMed

    Ahmed, Md Kawser; Parvin, Elora; Arif, Mohammad; Islam, Md Monirul; Akter, Mosammat Salma; Khan, Mohammad Shahneawz

    2011-11-01

    The present investigation was undertaken to study the induction of DNA damage by lead chloride (PbCl(2)) in freshwater climbing perch Anabas testudineus using alkaline single cell gel electrophoresis (comet assay). Based on the LC(50) values of lead chloride of A. testudineus three different concentrations viz., 0.1, 1.0 and 2.0 mg/L were selected to expose fish. The DNA damage was observed in the gill, kidney and liver tissue as the percentage of DNA in comet tails and comet heads in the tissue of the exposed fish. DNA damage at different concentrations showed sensitivity to particular tissue. The liver tissue exhibited significantly (p < 0.01) higher DNA damage, followed by kidney and gill. However, the DNA damage was found to be dose dependent; at 2 mg/L of PbCl(2) the tail and head DNA of liver tissue were 57.84% and 39.49%, in kidney tissue the values were 52.36% and 44.97% whereas in gill tissue the values were 48.86% and 48.96% respectively. The current study explored the utility of the comet assay for in vivo laboratory studies using A. testudineus species for screening the genotoxic potential of lead chloride. PMID:21210209

  1. Buried soils in a perched dunefield as indicators of late holecene lake-level change in the Lake Superior basin

    USGS Publications Warehouse

    Anderton, John B.; Loope, Walter L.

    1995-01-01

    A stratigraphic analysis of buried soils within the Grand Sable Dunes, a dune field perched 90 m above the southern shore of Lake Superior, reveals a history of eolian activity apparently linked with lake-level fluctuations over the last 5500 yr. A relative rise in the water plane of the Nipissing Great Lakes initially destabilized the lakeward bluff face of the Grand Sable plateau between 5400 and 4600 14C yr B.P. This led to the burial of the Sable Creek soil by eolian sediments derived from the bluff face. Subsequent episodes of eolian activity appear to be tied to similar destabilizing events; high lake levels may have initiated at least four and perhaps eleven episodes of dune building as expressed by soil burials within the dunes. Intervening low lake levels probably correlate with soil profile development, which varies from the well-developed Sable Creek Spodosol catena to thin organic layers containing in-place stumps and tree trunks. Paleoecological reconstructions available for the area do not imply enough climatic change to account for the episodic dune activity. Burial of soils by fine-fraction sediments links dune-building episodes with destabilization of the lower lake-facing bluff, which is rich in fines.

  2. Effect of high pressure processing on textural and microbiological quality of pink perch (Nemipterus japonicus) sausage during chilled storage

    NASA Astrophysics Data System (ADS)

    Kunnath, Sarika; Panda, Satyen Kumar; Jaganath, Bindu; Gudipati, Venkateshwarlu

    2015-10-01

    The non-thermal high pressure (HP) processing was studied on fish sausage to enhance the quality during chilled storage. Pink perch (Nemipterus japonicus) sausages, packed in poly amide casing under vacuum were subjected to 400, 500 and 600 MPa pressures (dwell time: 10 min and ramp rate: 300 MPa/min) and compared with heat-set samples for physico-chemical and microbial quality parameters. Pressurized samples formed softer and glossier gels with a slight reduction in water-holding capacity. HP made the texture of sausage softer, cohesive and less chewy and gummier than heat-treated ones. Folding test seen higher acceptance values in samples treated at 500 and 600 MPa, during storage. Maximum log reduction in microbial count was observed in 600 MPa immediately, and significant difference in cooked and pressurized sausages was seen only up to 7th day. This revealed the potential application of HP in replacing conventional heat treatment for sausages preparation with enhanced shelf-life.

  3. Catchment-scale conservation units identified for the threatened Yarra pygmy perch (Nannoperca obscura) in highly modified river systems.

    PubMed

    Brauer, Chris J; Unmack, Peter J; Hammer, Michael P; Adams, Mark; Beheregaray, Luciano B

    2013-01-01

    Habitat fragmentation caused by human activities alters metapopulation dynamics and decreases biological connectivity through reduced migration and gene flow, leading to lowered levels of population genetic diversity and to local extinctions. The threatened Yarra pygmy perch, Nannoperca obscura, is a poor disperser found in small, isolated populations in wetlands and streams of southeastern Australia. Modifications to natural flow regimes in anthropogenically-impacted river systems have recently reduced the amount of habitat for this species and likely further limited its opportunity to disperse. We employed highly resolving microsatellite DNA markers to assess genetic variation, population structure and the spatial scale that dispersal takes place across the distribution of this freshwater fish and used this information to identify conservation units for management. The levels of genetic variation found for N. obscura are amongst the lowest reported for a fish species (mean heterozygosity of 0.318 and mean allelic richness of 1.92). We identified very strong population genetic structure, nil to little evidence of recent migration among demes and a minimum of 11 units for conservation management, hierarchically nested within four major genetic lineages. A combination of spatial analytical methods revealed hierarchical genetic structure corresponding with catchment boundaries and also demonstrated significant isolation by riverine distance. Our findings have implications for the national recovery plan of this species by demonstrating that N. obscura populations should be managed at a catchment level and highlighting the need to restore habitat and avoid further alteration of the natural hydrology. PMID:24349405

  4. Ultrastructural features of hepatocytes in cultured Eurasian perch ( Perca fluviatilis L.) as affected by nutritional and husbandry conditions.

    PubMed

    Blanchard, Gersande; Gardeur, Jean N; Mathis, Nicolas; Brun-Bellut, Jean; Kestemont, Patrick

    2008-08-01

    A wide range of factors can be attributed to the syndrome of fatty liver observed in some cultured fish species. The objective of the study was therefore to quantify different hepatocyte ultrastructural features as potentially influenced by twelve nutritional and husbandry factors, in order to discriminate the most influent factors in Eurasian perch (Perca fluviatilis), a typical carnivorous temperate fish species. Twenty-four groups of juveniles (initial weight 57.6 (SD 14.4) g) were intensively reared for 116 d and fed sixteen different isoproteic diets. The distribution of the experimental treatments was based on a multivariate fractional factorial design (L(24) 2(12)) with either high (+1) or low (-1) level of each of the following factors: diet (lipid and protein sources, lipid content, astaxanthin enrichment), feeding level, daily and weekly distribution frequency, fish density, initial weight heterogeneity, temperature, photoperiod, and light spectrum. Liver lipid droplets, glycogen, mitochondria and rough endoplasmic reticulum (RER) were semi-quantified and analysed by a soft imaging system using transmission electronic microscopy photographs. Important variability of hepatocyte ultrastructural features was observed. The present study confirms that the rearing temperature, through its influences in the general metabolic activity, seems to be the main factor modifying mainly lipid droplet accumulation and RER development. However, factors that could be pooled under the designation of factors leading to food accessibility and lipid and protein quality intensify or compensate the effect of temperature. PMID:18304390

  5. Investigation of the Potential for 90Sr Immobilization in INTEC Perched Water via Microbially Facilitated Calcite Precipitation

    SciTech Connect

    Yoshiko Fujita; Karen E. Wright; William A. Smith

    2006-10-01

    The goal of this work is to evaluate the applicability of a biogeochemical sequestration approach for remediation of 90Sr contamination in perched water zones underlying the Idaho Nuclear Technology and Engineering Center (INTEC). The approach is based on the accelerated co-precipitation of the contaminant in calcite, where the acceleration is catalyzed by the microbial urea hydrolysis. We have previously demonstrated the potential for this remediation mechanism to immobilize strontium. Urea hydrolysis promotes calcite precipitation (and trace metal co-precipitation) by increasing groundwater pH and alkalinity. Ureolysis is catalyzed by the urease enzyme, which is produced by many environmental microorganisms. In the Snake River Plain Aquifer, which is saturated with respect to calcite, any co-precipitated 90Sr should be effectively sequestered over the long-term, even after return to pre-manipulation conditions. Another advantage of the ureolysis approach is that the NH4+ ions produced by the reaction can exchange with cations sorbed to subsurface minerals, thereby enhancing the availability of the radionuclides for re-capture via a more stable mechanism (co-precipitation rather than adsorption).

  6. Harvesting the Ocean: 1. The Ocean.

    ERIC Educational Resources Information Center

    Caton, Albert, Ed.; And Others

    This booklet is the first in a series of three interdisciplinary units which focus specifically on the Pacific Ocean and its surrounding countries. The booklet, designed for lower secondary students, provides an introduction to the ocean environment such that students can understand the physical factors underlying issues raised by the other two…

  7. The Ocean Literacy Campaign

    NASA Astrophysics Data System (ADS)

    Schoedinger, S. E.; Strang, C.

    2008-12-01

    "Ocean Literacy is an understanding of the ocean's influence on you and your influence on the ocean." This simple statement captures the spirit of a conceptual framework supporting ocean literacy (COSEE et al., 2005). The framework comprises 7 essential principles and 44 fundamental concepts an ocean literate person would know (COSEE et al., 2005). The framework is the result of an extensive grassroots effort to reach consensus on (1) a definition for ocean literacy and (2) an articulation of the most important concepts to be understood by ocean-literate citizen (Cava et al., 2005). In the process of reaching consensus on these "big ideas" about the ocean, what began as a series of workshops has emerged as a campaign "owned" by an ever-expanding community of individuals, organizations and networks involved in developing and promoting the framework. The Ocean Literacy Framework has provided a common language for scientists and educators working together and serves as key guidance for the ocean science education efforts. This presentation will focus on the impact this Ocean Literacy Campaign has had to date as well as efforts underway to provide additional tools to enable educators and educational policy makers to further integrate teaching and learning about the ocean and our coasts into formal K-12 education and informal education. COSEE, National Geographic Society, NOAA, College of Exploration (2005). Ocean Literacy: The Essential Principles of Ocean Sciences Grades K-12, a jointly published brochure, URL: http://www.coexploration.org/oceanliteracy/documents/OceanLitChart.pdf Cava, F., S. Schoedinger , C. Strang, and P. Tuddenham (2005). Science Content and Standards for Ocean Literacy: A Report on Ocean Literacy, URL: http://www.coexploration.org/oceanliteracy/documents/OLit2004-05_Final_Report.pdf.

  8. People and Oceans.

    ERIC Educational Resources Information Center

    NatureScope, 1988

    1988-01-01

    Discusses people's relationship with oceans, focusing on ocean pollution, use, and protective measures of the sea and its wildlife. Activities included are "Mythical Monsters"; "Globetrotters"; "Plastic in the Sea"; and "Sea of Many Uses." (RT)

  9. Introduction to ocean optics

    NASA Technical Reports Server (NTRS)

    Gordon, H. R.; Smith, R. C.; Zaneveld, J. R. V.

    1980-01-01

    The fundamental inherent and apparent optical properties of natural waves are reviewed and relationships between these properties, as related through the radiative transfer equation, are examined. Applications of ocean optics to geophysics, biological oceanography, and ocean remote sensing are discussed.

  10. Ocean Robotic Networks

    SciTech Connect

    Schofield, Oscar

    2012-05-23

    We live on an ocean planet which is central to regulating the Earth’s climate and human society. Despite the importance of understanding the processes operating in the ocean, it remains chronically undersampled due to the harsh operating conditions. This is problematic given the limited long term information available about how the ocean is changing. The changes include rising sea level, declining sea ice, ocean acidification, and the decline of mega fauna. While the changes are daunting, oceanography is in the midst of a technical revolution with the expansion of numerical modeling techniques, combined with ocean robotics. Operating together, these systems represent a new generation of ocean observatories. I will review the evolution of these ocean observatories and provide a few case examples of the science that they enable, spanning from the waters offshore New Jersey to the remote waters of the Southern Ocean.

  11. Activity Book: Ocean Ecology.

    ERIC Educational Resources Information Center

    Learning, 1992

    1992-01-01

    Presents a collection of activities to help elementary students study ocean ecology. The activities have students investigate ocean inhabitants, analyze animal adaptations, examine how temperature and saltiness affect ocean creatures, and learn about safeguarding the sea. Student pages offer reproducible learning sheets. (SM)

  12. Life in the Ocean.

    ERIC Educational Resources Information Center

    NatureScope, 1988

    1988-01-01

    Focuses on what life is like in the three major regions of the ocean: (1) the sunlit surface waters; (2) the dim mid-waters; and (3) the dark ocean depths. Five activities and three pages of ocean organisms for copying are included. (Author/RT)

  13. The Physical Ocean.

    ERIC Educational Resources Information Center

    NatureScope, 1988

    1988-01-01

    Examines the physical properties of the ocean (including the composition of seawater; waves, currents, and tides) and the topography of the ocean floor. Included are (1) activities on oceans, saltwater, and the sea floor; and (2) questions, and a puzzle which can be copied. (Author/RT)

  14. Ocean Drilling Simulation Activity.

    ERIC Educational Resources Information Center

    Telese, James A.; Jordan, Kathy

    The Ocean Drilling Project brings together scientists and governments from 20 countries to explore the earth's structure and history as it is revealed beneath the oceans' basins. Scientific expeditions examine rock and sediment cores obtained from the ocean floor to learn about the earth's basic processes. The series of activities in this…

  15. Perched Lava Pond Complex on South Rift of Axial Volcano Revealed in AUV Mapping

    NASA Astrophysics Data System (ADS)

    Paduan, J. B.; Clague, D. A.; Caress, D. W.; Thomas, H. J.

    2013-12-01

    -like structures and jumbled sheet flows on the floors suggest the eruption was on-going when the ponds emptied. 14C-dating of foraminifera from basal sediments on the pond floors gives a minimum age for the ponds of ~1500 years, which is older than any of the surface flows in Axial's summit caldera. Limu o Pele was abundant. Glass contents of the recovered lavas are 7.6 to 8.0 wt% MgO with few exceptions, and other than being plagioclase-phyric, the chemistry is similar to the majority of lavas at the summit. Lava samples from the floors of several ponds have a few tenths of a weight percent lower MgO than the nearby levees, suggesting the pond's molten interior or resupplied lavas had some time to cool. The varying levee rim heights and abundance of ponds in the vicinity suggest this type of activity occurred many times in this area, but it is an unusual eruption style for mid-ocean ridges. Another lava pond complex with even higher levees occurs on the north rift of Axial Volcano. Formation of these ponds requires long-lived, steady, moderate-eruption-rate lava effusion on nearly horizontal seafloor and may occur only on deep distal rift zones of central volcanoes.

  16. Emerging ocean issues

    NASA Astrophysics Data System (ADS)

    Richman, Barbara T.

    1984-04-01

    Seven topics have been identified by the topics committee of the Year of the Ocean as focal points of discussions as part of the Year of the Ocean celebration. The Year of the Ocean (Eos, June 19, 1984, p. 402, and April 24, 1984, p. 326) is a year-long commemoration and celebration, begun on July 1, of the oceans. The commemoration has been endorsed by Congress and by President Ronald Reagan.The topics committee is composed of nearly 20 representatives from government, industry, and academia. Thomas Maginnis, director of the National Oceanic and Atmospheric Administration's office of policy and planning, is the chairman of the topics committee.

  17. Regional Ocean Data Assimilation

    NASA Astrophysics Data System (ADS)

    Edwards, Christopher A.; Moore, Andrew M.; Hoteit, Ibrahim; Cornuelle, Bruce D.

    2015-01-01

    This article reviews the past 15 years of developments in regional ocean data assimilation. A variety of scientific, management, and safety-related objectives motivate marine scientists to characterize many ocean environments, including coastal regions. As in weather prediction, the accurate representation of physical, chemical, and/or biological properties in the ocean is challenging. Models and observations alone provide imperfect representations of the ocean state, but together they can offer improved estimates. Variational and sequential methods are among the most widely used in regional ocean systems, and there have been exciting recent advances in ensemble and four-dimensional variational approaches. These techniques are increasingly being tested and adapted for biogeochemical applications.

  18. Perching and Interflow Occurrence over a Shallow Argillic Layer in a Low Relief Upper Coastal Plan Watershed

    NASA Astrophysics Data System (ADS)

    Du, E.; Jackson, C. R.; Vache, K. B.; Hopp, L.

    2011-12-01

    On a first order, low relief, forested watershed at the Savannah River Site (SRS) in the Upper Coastal Plain of South Carolina, we are monitoring soil moisture, shallow piezometric behavior, interflow, groundwater dynamics, and streamflow to identify critical flow pathways, characterize system behavior, and parameterize distributed hydrologic models for estimating effects of bioenergy feedstock production. A mix of pine and hardwoods reforested from agricultural land abandoned in 1950 cover the watershed. Sandy topsoils overlie a low permeability sandy clay loam argillic layer on gently rolling hills with flat forested wetland valleys accommodating slow moving intermittent streamflow. Depths to clay and the saturated hydraulic conductivity (Ksat) of the clay are highly variable. Compact constant head permeameter measurements vary over six orders of magnitude, with anomalies featuring conductivities greater than those observed in the topsoils. Perching on the clay horizon was common. Although the geometric mean and median Ksat of the argillic layer are low (Ksat as low as 0.001 cm/hr), interflow only occurs with large storms on wet soils apparently due to clay anomalies, low relief topography, and relatively high active storage within the topsoil. Fine scale detection of depth to clay (2 by 1m) implies that delineation of subsurface topography may help to understand the flow behavior and destination. Wells records and saturated valley survey show that streamflow dynamics is poorly related to interflow but mainly controlled by seasonal groundwater dynamics. Streamflow analyses at different scales indicate hyporheic flow contribute significantly to the overall water budget at 1st order streams while the groundwater bypass is relatively small at downstream gauges. The next step is to integrate temporal series data of streamflow, soil moisture, groundwater, and interflow to develop and parameterized hydrologic models.

  19. Atmospheric mercury in the vapor phase, and in fine and coarse particulate matter at Perch River, New York

    NASA Astrophysics Data System (ADS)

    Ames, Michael; Gullu, Gulen; Olmez, Ilhan

    Daily samples of size segregated atmospheric particulate matter ( da < 2.5 μm, and 2.5 μm < da < 10 μm), and vapor-phase mercury have been collected at five locations in upstate New York over a period of two years. Atmospheric concentrations were determined for mercury and, in the particulate matter, for up to 38 other elements by Instrumental Neutron Activation Analysis (INAA). At the Perch River sampling site, the average vapor-phase mercury concentration was 2.4 ng m -3 with a seasonal pattern of higher winter and lower summer concentrations observed over both years of sampling. The average fine and coarse particulate concentrations were 0.058 and 0.025 ng m -3, respectively. Concentrations for the particulate concentrations followed a log-normal frequency distribution with the most frequently occurring value for fine particulates being 0.012 ng m -3 and for coarse particulates 0.009 ng m -3. Episodic high concentrations of both fine and coarse particulate mercury indicate the impact of specific s ources. No correlation was found among the three different types of samples on either an overall or daily basis. By applying factor analysis (FA) to the data and using known marker species for specific types of emissions, the sources of the particulate mercury were identified and their contributions estimated. Fine particulate mercury concentrations were primarily associated with regional sources in the midwestern U.S.A., with copper smelting, and with the combined influence of aluminum and precious metals processing. Coarse particulate mercury concentrations were principally related to local aluminum processing facilities. The source identification results of the FA were confirmed by examining back-projected, mixed-layer wind trajectories. From February 1993 through the end of the particulate sampling in September 1993 fine particulate mercury concentrations declined significantly possibly due to the installation of particulate controls at one or more of the copper

  20. The role of continental shelf width in determining freshwater phylogeographic patterns in south-eastern Australian pygmy perches (Teleostei: Percichthyidae).

    PubMed

    Unmack, Peter J; Hammer, Michael P; Adams, Mark; Johnson, Jerald B; Dowling, Thomas E

    2013-03-01

    Biogeographic patterns displayed by obligate freshwater organisms are intimately related to the nature and extent of connectivity between suitable habitats. Two of the more significant barriers to freshwater connections are seawater and major drainage divides. South-eastern Australia provides a contrast between these barriers as it has discrete areas that are likely influenced to a greater or lesser extent by each barrier type. We use continental shelf width as a proxy for the potential degree of river coalescence during low sea levels. Our specific hypothesis is that the degree of phylogeographic divergence between coastal river basins should correspond to the continental shelf width of each region. This predicts that genetic divergences between river basins should be lowest in regions with a wider continental shelf and that regions with similar continental shelf width should have similar genetic divergences. Pygmy perches (Nannoperca australis and Nannoperca 'flindersi') in south-eastern Australia provide an ideal opportunity to test these biogeographic hypotheses. Phylogeographic patterns were examined based on range-wide sampling of 82 populations for cytochrome b and 23 polymorphic allozyme loci. Our results recovered only limited support for our continental shelf width hypothesis, although patterns within Bass clade were largely congruent with reconstructed low sea-level drainage patterns. In addition, we identified several instances of drainage divide crossings, typically associated with low elevational differences. Our results demonstrate high levels of genetic heterogeneity with important conservation implications, especially for declining populations in the Murray-Darling Basin and a highly restricted disjunct population in Ansons River, Tasmania. PMID:23398527

  1. Feeding Glycyrrhiza glabra (liquorice) and Astragalus membranaceus (AM) alters innate immune and physiological responses in yellow perch (Perca flavescens).

    PubMed

    Elabd, Hiam; Wang, Han-Ping; Shaheen, Adel; Yao, Hong; Abbass, Amany

    2016-07-01

    The current work assessed the potential immunomodulatory and growth-promoting effects of Astragalus membranaceus (AM) and Glycyrrhiza glabra (liquorice) in Yellow perch (Perca flavescens). In this regard, fish with an average weight of 31 ± 1.0 g were divided into five groups, and fed daily with an additive-free basal diet (control); 1, 2, and 3% (w/w) Glycyrrhiza glabra, and the fifth diet was incorporated with a combination of 1% G. glabra-AM for a four-week period. Immunological, biochemical and growth parameters were measured; and sub-groups of fish were exposed to 1-week starvation. The results showed that incorporating AM and liquorice in the diet significantly improved Immunological [superoxide dismutase (SOD), glutathione peroxidase (GPx), catalase (CAT), Lipid peroxidase (LPx) and lysozyme activities], biochemical [Aspartate Aminotransferase (AST) and Alanine Transaminase (ALT) activities; and glucose and cortisol concentrations] and growth performance parameters [body mass gain (BMG), specific growth rate (SGR), length, condition factor (K) and feed conversion ratio (FCR)]. In addition, markedly up-regulated the expression of related genes [Insulin-Like Growth Factor-1 (IGF-1), Serum amyloid A (SAA), Complement Component C3 (CCC3), Alpha 2 Macroglobulin (A2M), SOD and GPx] in treated fish groups compared to the control. Conclusively, feeding AM and liquorice diets significantly increased (P < 0.05) growth performance, antioxidant and immune response profiles throughout the entire experiment, suggesting their beneficial rule as natural anti-stress agents. PMID:27129627

  2. Environmental safety level of lead (Pb) pertaining to toxic effects on grey mullet (Mugil cephalus) and tiger perch (Terapon jarbua).

    PubMed

    Hariharan, G; Purvaja, R; Ramesh, R

    2016-01-01

    Acute and chronic bioassay toxicity test of Lead (Pb) in Grey Mullet (Mugil cephalus), and Tiger perch (Terapon jarbua) was conducted. LC50 values (Lethal Concentration) from acute tests and chronic values were calculated by the geometric mean of the No-Observed-Effect Concentration (NOEC) and the Lowest-Observed-Effect Concentration (LOEC) in a study period of 30 days. This research was conducted to evaluate the quantitative relationship between toxicity test statistics and correlation between toxicant and the organisms exposed. Three test average LC50 was analyzed for 24, 48, 72, and 96 h and the 96 h average LC50 of M. cephalus and T. jarbua is 2.57 ± 0.47 and 2.99 ± 0.23 mg/L of Pb, respectively. Significant correlation is observed with the increased time duration and exposure concentration. The NOEC and LOEC values were calculated based on survival of test organisms for M. cephalus and T. jarbua and the values are 0.014 and 0.029 and 0.011 and 0.022 mg/L, respectively. The chronic value is found to be 0.011 mg/L for M. cephalus and 0.021 mg/L for T. jarbua. The intensity of biochemical and histological alterations increased gradually with increased Pb concentration and the exposure time. Toxicity testing is the primary step to determine the water quality safe limit on marine organisms. The outcome of the study indicates that the sensitivity of juvenile organisms to Pb, persistence of toxic effects and biomarkers as a tool capable of revealing the toxic effects of heavy metals on the environment and aquatic biota. PMID:24984702

  3. Groundwater recharge assessment at local and episodic scale in a soil mantled perched karst aquifer in southern Italy

    NASA Astrophysics Data System (ADS)

    Allocca, V.; De Vita, P.; Manna, F.; Nimmo, J. R.

    2015-10-01

    Groundwater recharge assessment of karst aquifers, at various spatial and temporal scales, is a major scientific topic of current importance, since these aquifers play an essential role for both socio-economic development and fluvial ecosystems. In this study, groundwater recharge was estimated at local and episodic scales in a representative perched karst aquifer in a region of southern Italy with a Mediterranean climate. The research utilized measurements of precipitation, air temperature, soil water content, and water-table depth, obtained in 2008 at the Acqua della Madonna test area (Terminio Mount karst aquifer, Campania region). At this location the aquifer is overlain by ash-fall pyroclastic soils. The Episodic Master Recession (EMR) method, an improved version of the Water Table Fluctuation (WTF) method, was applied to estimate the amount of recharge generated episodically by individual rainfall events. The method also quantifies the amount of precipitation generating each recharge episode, thus permitting calculation of the Recharge to the Precipitation Ratio (RPR) on a storm-by-storm basis. Depending on the seasonally varying air temperature, evapotranspiration, and precipitation patterns, calculated values of RPR varied between 35% and 97% among the individual episodes. A multiple linear correlation of the RPR with both the average intensity of recharging rainfall events and the antecedent soil water content was calculated. Given the relatively easy measurability of precipitation and soil water content, such an empirical model would have great hydrogeological and practical utility. It would facilitate short-term forecasting of recharge in karst aquifers of the Mediterranean region and other aquifers with similar hydrogeological characteristics. By establishing relationships between the RPR and climate-dependent variables such as average storm intensity, it would facilitate prediction of climate-change effects on groundwater recharge. The EMR methodology

  4. Evaluating fishery rehabilitation under uncertainty: A bioeconomic analysis of quota management for the Green Bay yellow perch fishery

    USGS Publications Warehouse

    Johnson, B.L.; Milliman, S.R.; Bishop, R.C.; Kitchell, J.F.

    1992-01-01

    The fishery for yellow perch Perca flavescens in Green Bay, Lake Michigan, is currently operating under a rehabilitation plan based on a commercial harvest quota. We developed a bioeconomic computer model that included links between population density and growth, recruitment, and fishing effort for this fishery. Random variability was included in the stock-recruitment relation and in a simulated population assessment. We used the model in an adaptive management framework to evaluate the effects of the rehabilitation plan on both commercial and sport fisheries and to search for ways to improve the plan. Results indicate that the current quota policy is a member of a set of policies that would meet most management goals and increase total value of the fishery. Sensitivity analyses indicate that this conclusion is robust over a wide range of biological conditions. We predict that commercial fishers will lose money relative to the baseline condition, but they may receive other benefits from the elimination of the common-property nature of the fishery. The prospect exists for managing variability in harvest and stock size and for maximizing economic returns in the fishery, but more information is required, primarily on sportfishing effort dynamics and angler preferences. Stock-recruitment relations, density dependence of growth, and dynamics of sportfishing effort are the primary sources of uncertainty limiting the precision of our predictions. The current quota policy is about as good as other policies at reducing this uncertainty and appears, overall, to be one of the best choices for this fishery. The analytical techniques used in this study were primarily simple, heuristic approaches that could be easily transferred to other studies.

  5. Comparative susceptibility among three stocks of yellow perch, Perca flavescens (Mitchill), to viral haemorrhagic septicaemia virus strain IVb from the Great Lakes

    USGS Publications Warehouse

    Olson, W.; Emmenegger, E.; Glenn, J.; Winton, J.; Goetz, F.

    2013-01-01

    The Great Lakes strain of viral haemorrhagic septicaemia virus IVb (VHSV-IVb) is capable of infecting a wide number of naive species and has been associated with large fish kills in the Midwestern United States since its discovery in 2005. The yellow perch, Perca flavescens (Mitchill), a freshwater species commonly found throughout inland waters of the United States and prized for its high value in sport and commercial fisheries, is a species documented in several fish kills affiliated with VHS. In the present study, differences in survival after infection with VHSV IVb were observed among juvenile fish from three yellow perch broodstocks that were originally derived from distinct wild populations, suggesting innate differences in susceptibility due to genetic variance. While all three stocks were susceptible upon waterborne exposure to VHS virus infection, fish derived from the Midwest (Lake Winnebago, WI) showed significantly lower cumulative % survival compared with two perch stocks derived from the East Coast (Perquimans River, NC and Choptank River, MD) of the United States. However, despite differences in apparent susceptibility, clinical signs did not vary between stocks and included moderate-to-severe haemorrhages at the pelvic and pectoral fin bases and exophthalmia. After the 28-day challenge was complete, VHS virus was analysed in subsets of whole fish that had either survived or succumbed to the infection using both plaque assay and quantitative PCR methodologies. A direct correlation was identified between the two methods, suggesting the potential for both methods to be used to detect virus in a research setting.

  6. Characterization and evaluation of sex-specific expression of suppressors of cytokine signaling (SOCS)-1 and -3 in juvenile yellow perch (Perca flavescens) treated with lipopolysaccharide.

    PubMed

    Shepherd, Brian S; Rees, Christopher B; Binkowski, Fred P; Goetz, Frederick W

    2012-09-01

    The suppressor of cytokine signaling (SOCS) proteins are a family of intracellular proteins that are centrally involved with vertebrate growth, development and immunity via their effects as negative feed-back regulators of cytokine (and hormone) signaling. The genes for SOCS-1 & -3 were cloned, sequences analyzed and expression patterns examined in the commercially-important teleost, yellow perch (Perca flavescens). The deduced (mature) proteins for yellow perch (yp)SOCS-1 and (yp)SOCS-3 consist of 211 and 205 amino acids, respectively. Functional domains such as the Src homology-2 (SH2) and SOCS-box were present in ypSOCS-1 and ypSOCS-3 and these domains were well conserved between teleost species. Sequence analysis showed that ypSOCS-1 & -3 share highest homology (among similar teleost sequences), to the stickleback (Gasterosteus aculatus) SOCS-1 & -3 protein homologs. To investigate sex-specific expression of the ypSOCS-1 and ypSOCS-3 mRNAs, juvenile male and female yellow perch were immunologically challenged with a single injection (10 μg/g bw) of lipopolysaccharide (LPS) and tissues (gill, head kidney, kidney, liver and spleen) were sampled over a 48-h time-course. Quantitative real-time PCR analysis showed that ypSOCS-1 & -3 were expressed in all tissues examined and at all sampling time-points. LPS injection significantly induced ypSOCS-1 & -3 mRNA levels in gill, head kidney, liver, kidney and spleen, with maximal induction occurring at 6 h post-injection in each tissue. By 48-h post-injection, expression levels for ypSOCS-1 & -3 mRNAs approached, or reached, control levels in all tissues examined. While there were statistical interactions among variables (treatment, time and sex) for ypSOCS-1, we only found a main effect of sex on SOCS-3 mRNA expression in head kidney with higher copy numbers occurring in males than in females treated with LPS. Sexually-dimorphic expression of SOCS-1 or -3 mRNA has not been examined, or described, in a teleost. Our

  7. Efficacy of exogenous hormone (GnRHa) for induced breeding of climbing perch Anabas testudineus (Bloch, 1792) and influence of operational sex ratio on spawning success.

    PubMed

    Mandal, Babita; Kumar, Rajesh; Jayasankar, P

    2016-08-01

    The climbing perch, Anabas testudineus, is an air-breathing fish having great consumer preference as a food fish and is considered a prime candidate species for aquaculture. Spawning success is an important issue while using hormones for captive induced breeding. In the first experiment, a trial was conducted to assess the efficacy of a synthetic Gonadotropin Releasing Hormone analog (sGnRHa) on the spawning success of climbing perch. Female fish were administered six different doses each with a single intramuscular injection of sGnRHa hormone at 0.002 (TOD1), 0.005 (TOD2), 0.01 (TOD3), 0.015 (TOD4), 0.02 (TOD5), 0.03 (TOD6) μg/g body weight. Similarly, males were administered half of the hormone dose of females in all the respective treatment groups. The greatest (P<0.05) relative fecundity (715.13±15.0 eggs/g female body weight) and fertilization percentage rates (93.1±8.0%) occurred when female fish were treated at the 0.015μg/g body weight dose. There was a reduction in relative fecundity and hatching rate in female fish injected with the largest dose (1.5μL/g body weight) of sGnRHa. A second experiment was conducted to assess the effect of a different male-female ratio on optimum spawning success in climbing perch. For this study a different female to male ratio (1:1, 1:2, 1:3 and 1:4) and male to female ratio (1:1, 1:2 and 1:3) were used. There were a greater (P<0.05) relative fecundity (886.62±17.9 eggs/g female body weight), fertilization (98±6.7%) and hatching (99±5.4%) rates with the female to male ratio of 1:2. This indicated that the hormone dose of 0.015μg/g body weight and a female-male ratio of 1:2 are optimal for enhanced spawning success in the climbing perch. PMID:27346586

  8. An update of hydrologic conditions and distribution of selected constituents in water, Snake River Plain aquifer and perched groundwater zones, Idaho National Laboratory, Idaho, emphasis 2006-08

    USGS Publications Warehouse

    Davis, Linda C.

    2010-01-01

    Since 1952, radiochemical and chemical wastewater discharged to infiltration ponds (also called percolation ponds), evaporation ponds, and disposal wells at the Idaho National Laboratory (INL) has affected water quality in the eastern Snake River Plain aquifer and perched groundwater zones underlying the INL. The U.S. Geological Survey, in cooperation with the U.S. Department of Energy, maintains groundwater monitoring networks at the INL to determine hydrologic trends, and to delineate the movement of radiochemical and chemical wastes in the aquifer and in perched groundwater zones. This report presents an analysis of water-level and water-quality data collected from aquifer and perched groundwater wells in the USGS groundwater monitoring networks during 2006-08. Water in the Snake River Plain aquifer primarily moves through fractures and interflow zones in basalt, generally flows southwestward, and eventually discharges at springs along the Snake River. The aquifer primarily is recharged from infiltration of irrigation water, infiltration of streamflow, groundwater inflow from adjoining mountain drainage basins, and infiltration of precipitation. From March-May 2005 to March-May 2008, water levels in wells generally remained constant or rose slightly in the southwestern corner of the INL. Water levels declined in the central and northern parts of the INL. The declines ranged from about 1 to 3 feet in the central part of the INL, to as much as 9 feet in the northern part of the INL. Water levels in perched groundwater wells around the Advanced Test Reactor Complex (ATRC) also declined. Detectable concentrations of radiochemical constituents in water samples from wells in the Snake River Plain aquifer at the INL generally decreased or remained constant during 2006-08. Decreases in concentrations were attributed to decreased rates of radioactive-waste disposal, radioactive decay, changes in waste-disposal methods, and dilution from recharge and underflow. In April

  9. Thermodynamic Equations of State for Aqueous Solutions Applied to Deep Icy Satellite and Exoplanet Oceans

    NASA Astrophysics Data System (ADS)

    Vance, S.; Brown, J. M.; Bollengier, O.; Journaux, B.; Sotin, C.; Choukroun, M.; Barnes, R.

    2014-12-01

    Supporting life in icy world or exoplanet oceans may require global seafloor chemical reactions between water and rock. Such interactions have been regarded as limited in larger icy worlds such as Ganymede and Titan, where ocean depths approach 800 km and GPa pressures (>10katm). If the oceans are composed of pure water, such conditions are consistent with the presence of dense ice phases V and VI that cover the rocky seafloor. Exoplanets with oceans can obtain pressures sufficient to generate ices VII and VIII. We have previously demonstrated temperature gradients in such oceans on the order of 20 K or more, resulting from fluid compressibility in a deep adiabatic ocean based on our experimental work. Accounting for increases in density for highly saline oceans leads to the possibility of oceans perched under and between high pressure ices. Ammonia has the opposite effect, instead decreasing ocean density, as reported by others and confirmed by our laboratory measurements in the ammonia water system. Here we report on the completed equation of state for aqueous ammonia derived from our prior measurements and optimized global b-spline fitting methods We use recent diamond anvil cell measurements for water and ammonia to extend the equation of state to 400°C and beyond 2 GPa, temperatures and pressures applicable to icy worlds and exoplanets. Densities show much less temperature dependence but comparabe high-pressure derivatives to previously published ammonia-water properties derived for application to Titan (Croft et al. 1988). Thermal expansion is in better agreement with the more self-consistent equation of state of Tillner-Roth and Friend (1998). We also describe development of a planetary NaCl equation of state using recent measurements of phase boundaries and sound speeds. We examine implications of realistic ocean-ice thermodynamics for Titan and exoplanet interiors using the methodology recently applied to Ganymede for oceans dominated by MgSO4. High

  10. Ejecta from Ocean Impacts

    NASA Technical Reports Server (NTRS)

    Kyte, Frank T.

    2003-01-01

    Numerical simulations of deep-ocean impact provide some limits on the size of a projectile that will not mix with the ocean floor during a deep-ocean impact. For a vertical impact at asteroidal velocities (approx. 20 km/s), mixing is only likely when the projectile diameter is greater than 112 of the water depth. For oblique impacts, even larger projectiles will not mix with ocean floor silicates. Given the typical water depths of 4 to 5 km in deep-ocean basins, asteroidal projectiles with diameters as large as 2 or 3 km may commonly produce silicate ejecta that is composed only of meteoritic materials and seawater salts. However, the compressed water column beneath the projectile can still disrupt and shock metamorphose the ocean floor. Therefore, production of a separate, terrestrial ejecta component is not ruled out in the most extreme case. With increasing projectile size (or energy) relative to water depths, there must be a gradation between oceanic impacts and more conventional continental impacts. Given that 60% of the Earth's surface is covered by oceanic lithosphere and 500 m projectiles impact the Earth on 10(exp 5) y timescales, there must be hundreds of oceanic impact deposits in the sediment record awaiting discovery.

  11. World Ocean Circulation Experiment

    NASA Technical Reports Server (NTRS)

    Clarke, R. Allyn

    1992-01-01

    The oceans are an equal partner with the atmosphere in the global climate system. The World Ocean Circulation Experiment is presently being implemented to improve ocean models that are useful for climate prediction both by encouraging more model development but more importantly by providing quality data sets that can be used to force or to validate such models. WOCE is the first oceanographic experiment that plans to generate and to use multiparameter global ocean data sets. In order for WOCE to succeed, oceanographers must establish and learn to use more effective methods of assembling, quality controlling, manipulating and distributing oceanographic data.

  12. Global Ocean Phytoplankton

    NASA Technical Reports Server (NTRS)

    Franz, B. A.; Behrenfeld, M. J.; Siegel, D. A.; Werdell, P. J.

    2013-01-01

    Phytoplankton are free-floating algae that grow in the euphotic zone of the upper ocean, converting carbon dioxide, sunlight, and available nutrients into organic carbon through photosynthesis. Despite their microscopic size, these photoautotrophs are responsible for roughly half the net primary production on Earth (NPP; gross primary production minus respiration), fixing atmospheric CO2 into food that fuels our global ocean ecosystems. Phytoplankton thus play a critical role in the global carbon cycle, and their growth patterns are highly sensitive to environmental changes such as increased ocean temperatures that stratify the water column and prohibit the transfer of cold, nutrient richwaters to the upper ocean euphotic zone.

  13. Ocean acoustic reverberation tomography.

    PubMed

    Dunn, Robert A

    2015-12-01

    Seismic wide-angle imaging using ship-towed acoustic sources and networks of ocean bottom seismographs is a common technique for exploring earth structure beneath the oceans. In these studies, the recorded data are dominated by acoustic waves propagating as reverberations in the water column. For surveys with a small receiver spacing (e.g., <10 km), the acoustic wave field densely samples properties of the water column over the width of the receiver array. A method, referred to as ocean acoustic reverberation tomography, is developed that uses the travel times of direct and reflected waves to image ocean acoustic structure. Reverberation tomography offers an alternative approach for determining the structure of the oceans and advancing the understanding of ocean heat content and mixing processes. The technique has the potential for revealing small-scale ocean thermal structure over the entire vertical height of the water column and along long survey profiles or across three-dimensional volumes of the ocean. For realistic experimental geometries and data noise levels, the method can produce images of ocean sound speed on a smaller scale than traditional acoustic tomography. PMID:26723303

  14. Benefits of Turbid River Plume Habitat for Lake Erie Yellow Perch (Perca flavescens) Recruitment Determined by Juvenile to Larval Genotype Assignment

    PubMed Central

    Carreon-Martinez, Lucia B.; Walter, Ryan P.; Johnson, Timothy B.; Ludsin, Stuart A.; Heath, Daniel D.

    2015-01-01

    Nutrient-rich, turbid river plumes that are common to large lakes and coastal marine ecosystems have been hypothesized to benefit survival of fish during early life stages by increasing food availability and (or) reducing vulnerability to visual predators. However, evidence that river plumes truly benefit the recruitment process remains meager for both freshwater and marine fishes. Here, we use genotype assignment between juvenile and larval yellow perch (Perca flavescens) from western Lake Erie to estimate and compare recruitment to the age-0 juvenile stage for larvae residing inside the highly turbid, south-shore Maumee River plume versus those occupying the less turbid, more northerly Detroit River plume. Bayesian genotype assignment of a mixed assemblage of juvenile (age-0) yellow perch to putative larval source populations established that recruitment of larvae was higher from the turbid Maumee River plume than for the less turbid Detroit River plume during 2006 and 2007, but not in 2008. Our findings add to the growing evidence that turbid river plumes can indeed enhance survival of fish larvae to recruited life stages, and also demonstrate how novel population genetic analyses of early life stages can contribute to determining critical early life stage processes in the fish recruitment process. PMID:25954968

  15. Polychlorinated biphenyls in adult black bass and yellow perch were not associated with their reproductive success in the upper Hudson River, New York, USA.

    PubMed

    Maceina, Michael J; Sammons, Steven M

    2013-07-01

    Although production and use of polychlorinated biphenyls (PCBs) ceased nearly 35 yr ago, questions still remain concerning the potential chronic effects these compounds may have on wild fish, including their reproductive success. In the upper Hudson River, New York, USA, fish were exposed to PCBs primarily from 2 manufacturing plants located approximately 320 km upstream of New York City, New York, from the 1940s to 1977. The authors collected yellow perch (Perca flavescens), smallmouth bass (Micropterus dolomieu), and largemouth bass (M. salmoides) using electrofishing, measured PCBs in these adults, and estimated abundance and size of their offspring at age 1 yr (age-1 fish). Fish were collected annually from 2004 to 2009 from 1 control site upstream of the PCB discharge sites and from 2 sites downstream from where PCBs were released. These sites (pools) are separated by a series of dams, locks, and canals. Muscle tissue wet weight PCB and lipid-based PCB concentrations in adults in the 2 PCB exposure pools averaged approximately 1 to 3 µg/g and 100 to 500 µg/g, respectively. Age-1 abundances were not related to adult PCB concentrations but were inversely related to river flow. Size of age-1 fish was slightly greater at the PCB-exposure sites. Levels of PCBs in yellow perch, largemouth bass, and smallmouth bass in the upper Hudson River did not impair or reduce recruitment or reproductive success. PMID:23440915

  16. Do Carolina chickadees (Poecile carolinensis) and tufted titmice (Baeolophus bicolor) attend to the head or body orientation of a perched avian predator?

    PubMed

    Kyle, Steven C; Freeberg, Todd M

    2016-05-01

    Individuals of many prey species adjust their foraging behavior in response to the presence of a predator. Responding to predators takes time away from searching for and exploiting food resources. To balance between the need to avoid predation and the need to forage, individuals should attend to cues from predators that indicate risk. Two such cues might be the predator's head orientation (where it might be looking) and body orientation (where it might be moving). In the current study, flocks of Carolina chickadees, Poecile carolinensis, and tufted titmice, Baeolophus bicolor, were presented with perched hawk and owl models. Predator model head and body orientation were independently manipulated relative to a feeding station birds were using. Chickadees and titmice avoided the feeders more when the heads of the models were facing toward the feeders compared to facing away from the feeders. Calling behavior of birds was also affected by head orientation of the models. No effect of predator body orientation on chickadee and titmouse behavior was detected. The results indicate that when chickadees and titmice detect a perched avian predator, they assess risk primarily based upon its head orientation. (PsycINFO Database Record PMID:27195595

  17. Expression kinetics of key genes in the early innate immune response to Great Lakes viral hemorrhagic septicemia virus IVb infection in yellow perch (Perca flavescens)

    USGS Publications Warehouse

    Olson, Wendy; Emmenegger, Eveline; Glenn, Jolene; Simchick, Crystal; Winton, Jim; Goetz, Frederick

    2013-01-01

    The recently discovered strain of viral hemorrhagic septicemia virus, VHSV-IVb, represents an example of the introduction of an extremely pathogenic rhabdovirus capable of infecting a wide variety of new fish species in a new host-environment. The goal of the present study was to delineate the expression kinetics of key genes in the innate immune response relative to the very early stages of VHSV-IVb infection using the yellow perch (Perca flavescens) as a model. Administration of VHSV-IVb by IP-injection into juvenile yellow perch resulted in 84% cumulative mortality, indicating their high susceptibility to this disease. In fish sampled in the very early stages of infection, a significant up-regulation of Mx gene expression in the liver, as well as IL-1β and SAA activation in the head kidney, spleen, and liver was directly correlated to viral load. The potential down-regulation of Mx in the hematopoietic tissues, head kidney and spleen, may represent a strategy utilized by the virus to increase replication.

  18. Blue ocean strategy.

    PubMed

    Kim, W Chan; Mauborgne, Renée

    2004-10-01

    Despite a long-term decline in the circus industry, Cirque du Soleil profitably increased revenue 22-fold over the last ten years by reinventing the circus. Rather than competing within the confines of the existing industry or trying to steal customers from rivals, Cirque developed uncontested market space that made the competition irrelevant. Cirque created what the authors call a blue ocean, a previously unknown market space. In blue oceans, demand is created rather than fought over. There is ample opportunity for growth that is both profitable and rapid. In red oceans--that is, in all the industries already existing--companies compete by grabbing for a greater share of limited demand. As the market space gets more crowded, prospects for profits and growth decline. Products turn into commodities, and increasing competition turns the water bloody. There are two ways to create blue oceans. One is to launch completely new industries, as eBay did with online auctions. But it's much more common for a blue ocean to be created from within a red ocean when a company expands the boundaries of an existing industry. In studying more than 150 blue ocean creations in over 30 industries, the authors observed that the traditional units of strategic analysis--company and industry--are of limited use in explaining how and why blue oceans are created. The most appropriate unit of analysis is the strategic move, the set of managerial actions and decisions involved in making a major market-creating business offering. Creating blue oceans builds brands. So powerful is blue ocean strategy, in fact, that a blue ocean strategic move can create brand equity that lasts for decades. PMID:15559577

  19. Global Ocean Phytoplankton

    NASA Technical Reports Server (NTRS)

    Franz, B. A.; Behrenfeld, M. J.; Siegel, D. A.; Werdell, P. J.

    2014-01-01

    Marine phytoplankton are responsible for roughly half the net primary production (NPP) on Earth, fixing atmospheric CO2 into food that fuels global ocean ecosystems and drives the ocean's biogeochemical cycles. Phytoplankton growth is highly sensitive to variations in ocean physical properties, such as upper ocean stratification and light availability within this mixed layer. Satellite ocean color sensors, such as the Sea-viewing Wide Field-of-view Sensor (SeaWiFS; McClain 2009) and Moderate Resolution Imaging Spectroradiometer (MODIS; Esaias 1998), provide observations of sufficient frequency and geographic coverage to globally monitor physically-driven changes in phytoplankton distributions. In practice, ocean color sensors retrieve the spectral distribution of visible solar radiation reflected upward from beneath the ocean surface, which can then be related to changes in the photosynthetic phytoplankton pigment, chlorophyll- a (Chla; measured in mg m-3). Here, global Chla data for 2013 are evaluated within the context of the 16-year continuous record provided through the combined observations of SeaWiFS (1997-2010) and MODIS on Aqua (MODISA; 2002-present). Ocean color measurements from the recently launched Visible and Infrared Imaging Radiometer Suite (VIIRS; 2011-present) are also considered, but results suggest that the temporal calibration of the VIIRS sensor is not yet sufficiently stable for quantitative global change studies. All MODISA (version 2013.1), SeaWiFS (version 2010.0), and VIIRS (version 2013.1) data presented here were produced by NASA using consistent Chla algorithms.

  20. The Living Ocean.

    ERIC Educational Resources Information Center

    National Aeronautics and Space Administration, Washington, DC.

    This teaching guide contains information, activities, and discussion questions and answers about oceans for grades nine and ten. The information section covers the following topics: studying global ocean color from space, what can be seen from space, phytoplankton, carbon dioxide, and the greenhouse effect of the earth. (MKR)

  1. Introduction to ocean optics

    NASA Technical Reports Server (NTRS)

    Gordon, H. R.; Smith, R. C.; Zaneveld, J. R. V.

    1984-01-01

    In this introductory survey of optical oceanography, the fundamental inherent and apparent optical properties of natural waters are presented. Relationships between these inherent and apparent optical properties, as related through the radiative transfer equation, are then examined. Following the first three theoretical sections, brief discussions describing the application of ocean optics to geophysics, biological oceanography, and ocean remote sensing are then presented.

  2. An Ocean Mural.

    ERIC Educational Resources Information Center

    Graham, Frank; Graham, Ada

    1998-01-01

    Introduces a class project on oceans, fishes, and fishing industries around the world. Groups of students make a mural of the world, filling the oceans with accurate drawings of fish, fishing boats, and fishing equipment. Students learn about the importance of fish in various cultures and about the migration routes of fish. Includes a resource…

  3. A Nation of Oceans.

    ERIC Educational Resources Information Center

    Weber, Michael; Tinney, Richard

    This book is for people that want to know more about the oceans, its inhabitants, and the ocean processes. The main text of the book describes individual marine ecosystems including offshore open water, benthic, nearshore tropical, nearshore temperate, and nearshore arctic ecosystems. Discussed are some of the basic ecological principles found…

  4. Communicating Ocean Acidification

    ERIC Educational Resources Information Center

    Pope, Aaron; Selna, Elizabeth

    2013-01-01

    Participation in a study circle through the National Network of Ocean and Climate Change Interpretation (NNOCCI) project enabled staff at the California Academy of Sciences to effectively engage visitors on climate change and ocean acidification topics. Strategic framing tactics were used as staff revised the scripted Coral Reef Dive program,…

  5. Oceanic emissions of ammonia

    NASA Astrophysics Data System (ADS)

    Paulot, F.; Jacob, D. J.; Johnson, M.; Bell, T. G.; Stock, C. A.; Doney, S. C.

    2013-12-01

    Half of natural ammonia (NH3) emissions is thought to originate from the oceans. Such large emissions have implications for the global budget of N and the acidity of marine aerosols. We develop two new inventories of oceanic NH3 emissions based on simulated monthly NH3 seawater concentrations from the GFDL-COBALT and the CESM-BEC ocean models. These new inventories explicitly account for the effect of temperature on the water-atmosphere exchange of NH3. We evaluate these inventory using cruise observations of gas-phase ammonia (AMT cruises) and ammonium (NOAA cruises) as well as seawater measurement of NHx. Implications of atmospheric NHx observations for the exchange of N between ocean and land and ocean N/P limitations are discussed.

  6. Ocean acidification postcards

    USGS Publications Warehouse

    Schreppel, Heather A.; Cimitile, Matthew J.

    2011-01-01

    The U.S. Geological Survey (USGS) is conducting research on ocean acidification in polar, temperate, subtropical, and tropical regions including the Arctic, West Florida Shelf, and the Caribbean. Project activities include field assessment, experimental laboratory studies, and evaluation of existing data. The USGS is participating in international and interagency working groups to develop research strategies to increase understanding of the global implications of ocean acidification. Research strategies include new approaches for seawater chemistry observation and modeling, assessment of physiological effects on organisms, changes in marine ecosystem structure, new technologies, and information resources. These postcards highlight ongoing USGS research efforts in ocean acidification and carbon cycling in marine and coastal ecosystems in three different regions: polar, temperate, and tropical. To learn more about ocean acidification visit: http://coastal.er.usgs.gov/ocean-acidification/.

  7. Modeling ocean circulation

    SciTech Connect

    Semtner, A.J.

    1995-09-08

    Ocean numerical models have become quite realistic over the past several years as a result of improved methods, faster computers, and global data sets. Models now treat basin-scale to global domains while retaining the fine spatial scales that are important for modeling the transport of heat, salt, and other properties over vast distances. Simulations are reproducing observed satellite results on the energetics of strong currents and are properly showing diverse aspects of thermodynamic and dynamic ocean responses ranging from deep-water production of El Nino. Now models can represent not only currents but also the consequences for climate, biology, and geo-chemistry over time spans for months to decades. However, much remains to be understood from models about ocean circulation on longer time scales, including the evolution of the dominant water masses, the predictability of climate, and the ocean`s influence on global change. 34 refs., 6 figs.

  8. Ocean-atmospheric linkages

    NASA Technical Reports Server (NTRS)

    Rintoul, Stephen R.

    1992-01-01

    This chapter focuses on the role of the ocean in the global carbon cycle on the time scale of decades to centuries. The input rate of CO2 to the atmosphere due to fossil fuel burning and deforestation has continued to increase over the last century. To balance the global carbon budget, a sink is required whose magnitude is changing on similar time scales. We have sought to identify aspects of the ocean system that are capable of responding on decadal time scales, to examine our present ability to model such changes, and to pinpoint ways in which this ability could be improved. Many other important aspects of the ocean's role in global change are not addressed, including the importance of oceanic heat transport and thermal inertia to the climate system, biogeochemical cycling of elements other than carbon, and the importance of the ocean as a source or sink of trace gases.

  9. Contourobionts in ocean monitoring.

    PubMed

    Zaitsev, Y P

    1986-07-01

    The external ocean biotopes (contours), i.e. the ocean interfaces with the atmosphere, rocky, sandy, muddy shores and river waters are active surface areas providing the most favourable conditions for the development of life-forms. The contour communities (contourobionts) form the external biological structure of the oceans. Due to their location the contour communities are exposed to environmental factors much more heavily than the communities inhabiting the water column. Therefore they can be used as biological indicators of the borders of marine impact zones. They are of special significance for integrated global ocean monitoring. Systematic observations of the conditions of contour communities and individual contourobionts provide valuable information on the man-made changes in the seas and oceans. PMID:24254795

  10. Mesoscale ocean dynamics modeling

    SciTech Connect

    mHolm, D.; Alber, M.; Bayly, B.; Camassa, R.; Choi, W.; Cockburn, B.; Jones, D.; Lifschitz, A.; Margolin, L.; Marsden, L.; Nadiga, B.; Poje, A.; Smolarkiewicz, P.; Levermore, D.

    1996-05-01

    This is the final report of a three-year, Laboratory-Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). The ocean is a very complex nonlinear system that exhibits turbulence on essentially all scales, multiple equilibria, and significant intrinsic variability. Modeling the ocean`s dynamics at mesoscales is of fundamental importance for long-time-scale climate predictions. A major goal of this project has been to coordinate, strengthen, and focus the efforts of applied mathematicians, computer scientists, computational physicists and engineers (at LANL and a consortium of Universities) in a joint effort addressing the issues in mesoscale ocean dynamics. The project combines expertise in the core competencies of high performance computing and theory of complex systems in a new way that has great potential for improving ocean models now running on the Connection Machines CM-200 and CM-5 and on the Cray T3D.

  11. Ocean General Circulation Models

    SciTech Connect

    Yoon, Jin-Ho; Ma, Po-Lun

    2012-09-30

    1. Definition of Subject The purpose of this text is to provide an introduction to aspects of oceanic general circulation models (OGCMs), an important component of Climate System or Earth System Model (ESM). The role of the ocean in ESMs is described in Chapter XX (EDITOR: PLEASE FIND THE COUPLED CLIMATE or EARTH SYSTEM MODELING CHAPTERS). The emerging need for understanding the Earth’s climate system and especially projecting its future evolution has encouraged scientists to explore the dynamical, physical, and biogeochemical processes in the ocean. Understanding the role of these processes in the climate system is an interesting and challenging scientific subject. For example, a research question how much extra heat or CO2 generated by anthropogenic activities can be stored in the deep ocean is not only scientifically interesting but also important in projecting future climate of the earth. Thus, OGCMs have been developed and applied to investigate the various oceanic processes and their role in the climate system.

  12. Ocean Science Educator Award

    NASA Astrophysics Data System (ADS)

    The Office of Naval Research announces a program to identify and support academic ocean scientists (“Educators”) who have a distinguished record of educating high-quality doctoral and/or postdoctoral students and who will, under this program, draw postdoctoral scientists from other disciplines into the ocean sciences. Named “Educators” must be U.S. citizens with research and training experience in the ocean sciences and must have a current research and teaching position at a U.S. institution that confers doctoral degrees in ocean sciences.Participation is sought from U.S. institutions that confer doctoral degrees in one or more areas of ocean sciences; show a viable plan to identify, attract, and train, in the ocean sciences, U.S. citizen post-docs (Fellows) from other disciplines; and can show institutional commitment to ocean science education at the doctoral level. Three awards will be made via grants to institutions for a period of 3 years at $75,000 per year (at least $65,000 of these funds are intended for direct support of Fellows).

  13. Ocean energy program summary

    SciTech Connect

    Not Available

    1990-01-01

    The oceans are the world's largest solar energy collector and storage system. Covering 71% of the earth's surface, they collect and store this energy as waves, currents, and thermal and salinity gradients. The purpose of the US Department of Energy's (DOE) Ocean Energy Technology (OET) Program is to develop techniques that harness this ocean energy cost-effectively and in a way that does not harm the environment. The program seeks to develop ocean energy technology to a point where industry can accurately assess whether the technology is a viable energy conversion alternative, or supplement, to current power-generating systems. In past studies, DOE identified ocean thermal energy conversion (OTEC), which uses the temperature difference between warm surface water and cold deep water, as the most promising of the ocean energy technologies. As a result, the OET Program is concentrating on research that advances the OTEC technology. The program also continues to monitor and study developments in wave energy, ocean current, and salinity gradient concepts; but it is not actively developing these technologies now. 13 figs.

  14. Ocean energy program summary

    NASA Astrophysics Data System (ADS)

    1990-01-01

    The oceans are the world's largest solar energy collector and storage system. Covering 71 percent of the earth's surface, they collect and store this energy as waves, currents, and thermal and salinity gradients. The purpose of the U.S. Department of Energy's (DOE) Ocean Energy Technology (OET) Program is to develop techniques that harness this ocean energy cost effectively and in a way that does not harm the environment. The program seeks to develop ocean energy technology to a point where industry can accurately assess whether the technology is a viable energy conversion alternative, or supplement, to current power generating systems. In past studies, DOE identified ocean thermal energy conversion (OTEC), which uses the temperature difference between warm surface water and cold deep water, as the most promising of the ocean energy technologies. As a result, the OET Program is concentrating on research that advances the OTEC technology. The program also continues to monitor and study developments in wave energy, ocean current, and salinity gradient concepts; but it is not actively developing these technologies now.

  15. Molecular Characterization and Sex-Specific Tissue Expression of Estrogen Receptor Alpha (esr1), Estrogen Receptor Beta-a (esr2a) and Ovarian Aromatase (cyp19a1a) in Yellow Perch (Perca flavescens)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Yellow perch (Perca flavescens) exhibit an estrogen-stimulated sexual size dimorphism (SSD) wherein females grow faster and larger than males. To aid in the examination of this phenomenon, the cDNA sequences encoding estrogen receptor-alpha (esr1), estrogen receptor-beta-a (esr2a) and ovarian aroma...

  16. Dust and Ocean Plants

    NASA Technical Reports Server (NTRS)

    2002-01-01

    Adding iron to the diet of marine plant life has been shown in shipboard experiments to boost the amount of carbon-absorbing phytoplankton in certain parts of the world's oceans. A new study promises to give scientists their first global picture of the extent of these unique 'iron-limited' ocean regions, an important step in understanding how the ocean's biology controls the flow of carbon between the atmosphere and the ocean. The new study by researchers at NASA's Goddard Space Flight Center and the Department of Energy's Oak Ridge National Laboratory was presented at the American Geophysical Union's annual meeting in San Francisco on Friday, Dec. 15, 2000. Oceanic phytoplankton remove nearly as much carbon from the atmosphere each year as all land-based plants. Identifying the location and size of nutrient-limited areas in the open ocean has challenged oceanographers for nearly a century. The study pinpointed iron-limited regions by seeing which phytoplankton-rich areas of the world's oceans were also areas that received iron from wind-blown dust. In this map, areas with high levels of chlorophyll from phytoplankton and high levels of dust deposition (high correlation coefficients) are indicated in dark brown. Dust deposition was calculated by a 3-year modelled climatology for the years 1996-1998. The chlorophyll measurements are from 1998 observations from the SeaWiFS (Sea-viewing Wide Field-of-view Sensor) instrument on the OrbView-2 satellite. 'Global, satellite-based analyses such as this gives us insight into where iron deposition may be limiting ocean biological activity,' says lead author David Erickson of Oak Ridge National Laboratory's Computer Science and Mathematics Division. 'With this information we will be able to infer how the ocean productivity/iron deposition relationship might shift in response to climate change.' Map Source: David Erickson, Oak Ridge National Laboratory's Computer Science and Mathematics Division

  17. The Messinian Salinity Crisis: what can we expect from drilling the perched basins from the Balearic Promontory?

    NASA Astrophysics Data System (ADS)

    Johanna, Lofi; Angelo, Camerlenghi; Agnès, Maillard; Diana, Ochoa

    2015-04-01

    In spite of 40 years of multi-disciplinary research conducted on the Messinian Salinity Crisis (MSC) event, modalities, timing, causes, chronology and consequence at local and planetary scale of this event are still not yet fully understood, and the MSC event remains one of the longest-living controversies in Earth Science. A key factor for the controversy is certainly the lack of a complete record of the MSC deposits preserved in the deepest Mediterranean basins. Anywhere else, on the continental shelves and slopes, the MSC mostly generated a sedimentary/time lag corresponding to a widespread erosional surface. Correlations with the depositional units locally preserved onshore are thus complex, preventing the construction of a coherent scenario linking the outcropping MSC evaporites, the erosion on the margins, and the deposition of clastics and evaporites in the abyssal plains. Recent works based on seismic profile interpretations and conducted on the Balearic promontory allowed to evidence a series of small perched basins presently lying in different water depths stepped from the coast line down to the deep basin. These topographic lows trapped sedimentary series up to 500m thick, interpreted as MSC in age (Maillard et al., 2014; Mocnik et al., 2014; Driussi et al., in press). In the most proximal basins, these deposits have been drilled and logged for industriel purposes and consist of gypsum beds interbedded with marls. Ochoa et al. (submitted) demonstrated that these MSC deposits correlate with the Primary Lower Gypsum sequence deposited in marginal settings before the drawdown phase (Lugli et al., 2010) and that are now observed onshore in tectonically active areas. The basins located in more distal locations also contain MSC deposits (including <200m thick salt layers) but these have not been drilled. The relative age and chronology of the MSC deposits from one basin to another thus still need to be defined. The Balearic Promontory is probably the only

  18. Hydrogeochemical, Stable Isotopes and Hydrology of Fogo Volcano Perched Aquifers: São Miguel Island, Azores (Portugal)

    NASA Astrophysics Data System (ADS)

    Antunes, P. C.; Boutt, D. F.; Martini, A. M.; Ferstad, J.; Rodrigues, F. C.

    2012-12-01

    Fogo Volcano is located at central part of São Miguel Island and corresponds to a polygenetic volcano with a caldera made by an intercalated accumulation of volcaniclastic deposits and lava flows. São Miguel Island is one of the nine volcanic islands that form the Azores Archipelago. The volcano is 950 meters high, with a caldera diameter of 3.2 Km, which holds a lake inside. The last eruption occurred in 1563-1564, as one of a group of seven traquitic eruptions occurring within the last 5000 years. The volcanic activity is related to hydrothermal activity in a geothermal field located in the volcanoes North flank. The hydrology of Fogo Volcano is characterized by a series of perched-water bodies drained by a large number of springs grouped at different altitudes on the volcano flanks. It is possible to identify three types of water (1) Fresh water, cold temperature (12 - 17 C) with low dissolved solids contents (average conductivity of 179 μS/cm), pH range between 6.60 and 7.82, dominated by the major ions Na, K, HCO3, and Cl, and correspond mainly to sodium bicarbonate type water. (2) Mineral water, cold temperature (12.5 - 19.4 C) with low dissolved solids contents (average conductivity of 261 μS/cm), acid pH range between 4.62 and 6.79, and correspond mainly to sodium bicarbonate type water. (3) Thermal water, with temperature of 32 C, high dissolved solids content (4.62 mS/cm), with a pH around 4.50 and belongs to sodium sulfate type water. South Fogo volcano have only fresh water springs and at high elevation, springs drained from pumice fall deposits near 700 m of altitude. Water dissolved solids contents increased slightly with springs at lower altitude due to water-rock interaction. Springs sampled around 700 m high have a conductivity average of 85 μS/cm, at 520 m an average of 129 μS/cm, at 430 m an average of 182 μS/cm, at 200 m an average of 192 μS/cm and at 12 m high sea level and average of 472 μS/cm. This trend is observed at North Fogo

  19. Dynamic chemistry in the perched groundwater flowing through weathered bedrock underling a steep forested hillslope, north California

    NASA Astrophysics Data System (ADS)

    Kim, H.; Rempe, D. M.; Bishop, J. K.; Dietrich, W.; Fung, I.; Wood, T. J.

    2012-12-01

    The spatial and temporal pattern of groundwater chemistry in the seasonally perched groundwater systems that develop in the weathered bedrock zone under hillslopes have rarely been documented, yet chemical evolution of water here dictates the runoff chemistry to streams in many places. Here we exploit an intensively instrumented hillslope to document water well chemistry at three wells and adjacent stream. We have been sampling groundwater at daily frequency since October 2008 on a forested hillslope, "Rivendell", at the Angelo Coast Range Reserve located at the headwaters of the Eel River, California. The site is typical of California's coastal Mediterranean climate. The groundwater samples have been collected from a depth near the boundary between the weathered and fresh bedrock at three locations along the hillslope: Well 1 (bottom of hillslope), Well 3 (mid-slope), and Well 10 (near the ridge). Bulk rainwater and throughfall samples were collected at a meadow across the hillslope and at the middle of the slope, respectively, as well. Near the ridge (Well 10), during the first significant rainstorms of 2009 (133mm/42.5hours) and 2010 (220mm/42hours), when the water table changed only 0.32m and 0.66m, respectively, the concentration of Ca, Mg, and Na started to increase rapidly compared to the dry season (e.g. 2-6 μM vs 0.02-0.2μM [Mg]/day). However, during these same storms, K concentration sharply increased to 50-60 μM and decreased to 20-30μM, synchronizing with the water table responses. Throughfalls of these storms had at least 10 fold lower Ca, Mg, and Na concentrations than the well water while they had 10 fold higher K compared to the pre-event groundwater values. When the total seasonal cumulative rainfall exceeds 600 mm, the Well 10 solute concentration was diluted nearly 3 fold (e.g. [Mg] 0.3 mM vs. 0.1 mM) and the water table was raised significantly (2-6 meters). Throughout the rainy season, Well10 retained its diluted chemistry signature and on

  20. Temporal and spatial variability of Fe and Mn in perched groundwater flowing through weathered argillite underlying a steep forested hillslope

    NASA Astrophysics Data System (ADS)

    Kim, H.; Bishop, J. K.

    2013-12-01

    Groundwater flowing through weathered bedrock dictates the runoff chemistry to streams in many catchments yet; its chemical evolution has been rarely documented. In particular, observations of Fe and Mn dynamics in groundwater are extremely challenging due to their high reactivity. To preserve the sample integrity for these elements we have developed a new sampling scheme that is applicable to autosamplers; a gravitational filtration system (GFS). GFS is capable of filtering samples by gravity within 30 minutes after the sampling. The GFS samples showed a good agreement with reference samples, which were collected following the standard sampling method for trace metals (i.e. immediate filtration and acidification). Since October 2011, GFS has been employed to monitor Fe and Mn in perched groundwater that moves through weathered argillite in an intensively instrumented hillslope (Rivendell), in the Angelo Coast Range Reserve. The study site is located at the headwaters of the Eel River, northern California, characterized by a typical coastal Californian Mediterranean climate. We collected groundwater samples at 3 wells along the hillslope (upslope (W10), mid-slope (W3) and near the creek (W1)) with 1-3 day intervals. Additionally, rainwater and throughfall samples were collected at a meadow near the hillslope and at the middle of the hillslope, respectively. The results from our observations indicate that Fe and Mn exhibit distinct spatial and temporal behavior under variable hydrologic conditions. The concentrations of Fe in throughfall vs. rainwater were similar (0.45μM vs. 0.49μM), but Mn in throughfall was 10-fold higher than that in rainwater (1.2 μM vs. 0.1 μM). In the early rainy season, W10's water table was deep (-18m) and Fe and Mn in W10 were 30-150 nM and 1-2 μM, respectively. As the rainy season proceeds, W10's water table rose by 4-6m, indicating the arrival of new water. At this time, Mn in W10 decreased to ~0.1 μM, synchronizing with the water

  1. Ocean margins workshop

    SciTech Connect

    1990-12-31

    The Department of Energy (DOE) is announcing the refocusing of its marine research program to emphasize the study of ocean margins and their role in modulating, controlling, and driving Global Change phenomena. This is a proposal to conduct a workshop that will establish priorities and an implementation plan for a new research initiative by the Department of Energy on the ocean margins. The workshop will be attended by about 70 scientists who specialize in ocean margin research. The workshop will be held in the Norfolk, Virginia area in late June 1990.

  2. 50 CFR 679.64 - Harvesting sideboard limits in other fisheries.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... Pacific ocean perch. (A) The Aleutian Islands Pacific ocean perch harvest limit will be equal to the 1996 through 1997 aggregate retained catch of Aleutian Islands Pacific ocean perch by catcher/processors listed... sum of the Aleutian Islands Pacific ocean perch catch in 1996 and 1997 multiplied by the remainder...

  3. Ocean Science, 2nd ed

    SciTech Connect

    Stowe, K.

    1983-01-01

    An introductory treatment of all of the major areas of oceanographic studies including geological, physical, chemical, and biological aspects, ocean-atmosphere interactions, marine geology, and marine resources. Presents clear, concise explanations of ocean behavior and its properties. Explains the history behind specific aspects of the ocean environment. Includes considerably expanded sections on estuaries and marine biology, and chapters on marine ecology. Contents-The Earth. Plate Tectonics. The Ocean Bottom. Sediment Materials. Sediment Processes and Distributions. Properties of Ocean Waves. Waves and Tides. Beaches. The Components of Seawater--Part 1. The Components of Seawater--Part 2. The Ocean and Our Climate. The Earth's Rotation and Atmospheric Circulation. Ocean Surface Currents. Deep Ocean Currents and Water Masses. Seas and Estuaries. Biological Productivity in The Oceans. The Spectrum of Marine Organisms. Marine Ecology. Distributions and Lifestyles of Marine Organisms. Ocean Food Resources. Ocean Energy and Mineral Resources.

  4. Evaluating the spatial variation of total mercury in young-of-year yellow perch (Perca flavescens), surface water and upland soil for watershed-lake systems within the southern Boreal Shield

    USGS Publications Warehouse

    Gabriel, M.C.; Kolka, R.; Wickman, T.; Nater, E.; Woodruff, L.

    2009-01-01

    The primary objective of this research is to investigate relationships between mercury in upland soil, lake water and fish tissue and explore the cause for the observed spatial variation of THg in age one yellow perch (Perca flavescens) for ten lakes within the Superior National Forest. Spatial relationships between yellow perch THg tissue concentration and a total of 45 watershed and water chemistry parameters were evaluated for two separate years: 2005 and 2006. Results show agreement with other studies where watershed area, lake water pH, nutrient levels (specifically dissolved NO3--N) and dissolved iron are important factors controlling and/or predicting fish THg level. Exceeding all was the strong dependence of yellow perch THg level on soil A-horizon THg and, in particular, soil O-horizon THg concentrations (Spearman ?? = 0.81). Soil B-horizon THg concentration was significantly correlated (Pearson r = 0.75) with lake water THg concentration. Lakes surrounded by a greater percentage of shrub wetlands (peatlands) had higher fish tissue THg levels, thus it is highly possible that these wetlands are main locations for mercury methylation. Stepwise regression was used to develop empirical models for the purpose of predicting the spatial variation in yellow perch THg over the studied region. The 2005 regression model demonstrates it is possible to obtain good prediction (up to 60% variance description) of resident yellow perch THg level using upland soil O-horizon THg as the only independent variable. The 2006 model shows even greater prediction (r2 = 0.73, with an overall 10??ng/g [tissue, wet weight] margin of error), using lake water dissolved iron and watershed area as the only model independent variables. The developed regression models in this study can help with interpreting THg concentrations in low trophic level fish species for untested lakes of the greater Superior National Forest and surrounding Boreal ecosystem. ?? 2009 Elsevier B.V.

  5. Coast-ocean-atmosphere-ocean mesoscale interaction

    NASA Technical Reports Server (NTRS)

    Atlas, D.; Chou, S. H.

    1982-01-01

    In the case of cold air outbreaks, the combination of the coastal shape and the sea surface temperature (SST) pattern have a profound effect in establishing a low level mesoscale atmospheric circulation as a result of differential heating due to both variations in overwater path length and the SST. A convergence (or divergence) line then forms along a line exactly downwind of the major bend in the coastline. All this is consistent with the structure of the cloud patterns seen in a high resolution Landsat picture of the cloud streets and the major features are simulated well with a boundary layer model. The dominant convergence line is marked by notably larger clouds. To its east the convective roll clouds grow downstream in accord with the deepening of the boundary layer. To its west (i.e., coastal side) where the induced pressure field forces a strong westerly component in the boundary layer, the wind shear across the inversion gives rise to Kelvin-Helmholtz waves and billow clouds whose orientation is perpendicular to the shear vector and to the major convergence line. The induced mesoscale circulation will feedback on the ocean by intensifying the wind generated ocean wave growth and altering their orientation. Coastal cyclogenesis is due in large part not only to the fluxes of heat and moisture from the ocean, but particularly to the differential heating and moistening of the boundary layer air when the air trajectories pass over a well defined pattern of SST.

  6. Ocean products delivered by the Mercator Ocean Service Department

    NASA Astrophysics Data System (ADS)

    Crosnier, L.; Durand, E.; Soulat, F.; Messal, F.; Buarque, S.; Toumazou, V.; Landes, V.; Drevillon, M.; Lellouche, J.

    2008-12-01

    The newly created Service Department at Mercator Ocean is now offering various services for academic and private ocean applications. Mercator Ocean runs operationally ocean forecast systems for the Global and North Atlantic Ocean. These systems are based on an ocean general circulation model NEMO as well as on data assimilation of sea level anomalies, sea surface temperature and temperature and salinity vertical profiles. Three dimensional ocean fields of temperature, salinity and currents are updated and available weekly, including analysis and 2 weeks forecast fields. The Mercator Ocean service department is now offering a wide range of ocean derived products. This presentation will display some of the various products delivered in the framework of academic and private ocean applications: " Monitoring of the ocean current at the surface and at depth in several geographical areas for offshore oil platform, for offshore satellite launch platform, for transatlantic sailing or rowing boat races. " Monitoring of ocean climate indicators (Coral bleaching...) for marine reserve survey; " Monitoring of upwelling systems for fisheries; " Monitoring of the ocean heat content for tropical cyclone monitoring. " Monitoring of the ocean temperature/salinity and currents to guide research vessels during scientific cruises. The Mercator Ocean products catalogue will grow wider in the coming years, especially in the framework of the European GMES MyOcean project (FP7).

  7. Ocean research plan reviewed

    NASA Astrophysics Data System (ADS)

    Zielinski, Sarah

    A draft plan setting out priorities for U.S. ocean research generally was lauded for its clear and well-articulated view in a recent report from a committee of the U.S. National Research Council (NRC) of the US. National Academies. However, the committee advised that the plan would benefit from a bold vision for the future of ocean science research, additional details, and a reorganization to include cross-cutting research.The draft "Charting the Course for Ocean Science in the United States: Research Priorities for the Next Decade" was made available for public comment in September 2006 by the U.S. National Science and Technology Council's Joint Subcommittee on Ocean Science and Technology.

  8. Chemoautotrophy in the ocean

    NASA Astrophysics Data System (ADS)

    Middelburg, Jack J.

    2011-12-01

    Organic matter recycling releases ammonium, and under anoxic conditions, other reduced metabolites that can be used by chemoautotrophs to fix inorganic carbon. Here I present an estimate for the global rate of oceanic carbon fixation by chemoautotrophs (0.77 Pg C y-1). Near-shore and shelf sediments (0.29 Pg C y-1) and nitrifiers in the euphotic zone (0.29 Pg C y-1) and the dark ocean (0.11 Pg C y-1) are the most important contributors. This input of new organic carbon to the ocean is similar to that supplied by world-rivers and eventually buried in oceanic sediments. Chemoautotrophy driven by organic carbon recycling is globally more important than that fuelled by water-rock interactions and hydrothermal vent systems.

  9. Ocean optics IX

    SciTech Connect

    Blizard, M.A.

    1988-01-01

    These proceedings collect papers on optics and optical properties. Topics include: optical properties of water laser bathymetry, scattering from marine organisms, optically stimulated sound from bubbles, underwater laser-based imaging systems, and remote sensing of ocean physical properties.

  10. Geography and Weather: OCEANS.

    ERIC Educational Resources Information Center

    Collins, H. Thomas; Mogil, H. Michael

    1990-01-01

    Provided are suggestions for 23 different activities which can be used to discuss and investigate ocean currents and how they affect human activity. Several maps and charts accompany the activities. A list of 15 resources is included. (CW)

  11. Oceanic Basement Probed

    ERIC Educational Resources Information Center

    Cann, J. R.; Moore, David G.

    1978-01-01

    Summarizes findings of the deep sea drilling project at Scripps Institute of Oceanology. Results of Atlantic and Pacific Ocean drillings in terms of the composition and properties of the sea floor are discussed. (CP)

  12. Modeling the Pacific Ocean

    SciTech Connect

    Johnson, M.A.; O'Brien, J.J. )

    1990-01-01

    Two numerical models utilizing primitive equations (two momentum equations and a mass continuity equation) simulate the oceanography of the Pacific Ocean from 20{degrees}S to 50{degrees}N. The authors examine the abundant model data through visualization , by animating the appropriate model fields and viewing the time history of each model simulation as a color movie. The animations are used to aid understanding of ocean circulation.

  13. Ocean circulation studies

    NASA Technical Reports Server (NTRS)

    Koblinsky, C. J.

    1984-01-01

    Remotely sensed signatures of ocean surface characteristics from active and passive satellite-borne radiometers in conjunction with in situ data were utilized to examine the large scale, low frequency circulation of the world's oceans. Studies of the California Current, the Gulf of California, and the Kuroshio Extension Current in the western North Pacific were reviewed briefly. The importance of satellite oceanographic tools was emphasized.

  14. Ocean microbial metagenomics

    NASA Astrophysics Data System (ADS)

    Kerkhof, Lee J.; Goodman, Robert M.

    2009-09-01

    Technology for accessing the genomic DNA of microorganisms, directly from environmental samples without prior cultivation, has opened new vistas to understanding microbial diversity and functions. Especially as applied to soils and the oceans, environments on Earth where microbial diversity is vast, metagenomics and its emergent approaches have the power to transform rapidly our understanding of environmental microbiology. Here we explore select recent applications of the metagenomic suite to ocean microbiology.

  15. Endocrine and metabolic dysfunction in yellow perch, Perca flavescens, exposed to organic contaminants and heavy metals in the St. Lawrence River

    SciTech Connect

    Hontela, A.; Duclos, D.; Fortin, R.; Dumont, P.

    1995-04-01

    The endocrine and biochemical responses to the acute stress of capture and handling were investigated in sexually mature and in immature male and female yellow perch, Perca flavescens, from a site contaminated by organic contaminants (PAHs and PCBs) and heavy metals (Hg, Cd, As, and Zn) and from a reference site in the St. Lawrence River. Following a standardized capture and handling stress, fish from the contaminated site did not exhibit the expected physiological stress response observed in fish from the reference site. Blood cortisol and thyroxine levels were lower, and liver glycogen stores were greater in mature males and females, as well as in the immature fish from the contaminated site, compared to the reference site. Fish from the contaminated site also had smaller gonads and lower condition factor. The impaired ability to elevate blood cortisol in response to an acute stress may be used as a biomarker of toxic stress in health assessment of feral fish from polluted environments.

  16. Formation of perched lava ponds on basaltic volcanoes: Interaction between cooling rate and flow geometry allows estimation of lava effusion rates

    NASA Technical Reports Server (NTRS)

    Wilson, L.; Parfitt, E. A.

    1993-01-01

    Perched lava ponds are infrequent but distinctive topographic features formed during some basaltic eruptions. Two such ponds, each approximately 150 m in diameter, formed during the 1968 eruption at Napau Crater and the 1974 eruption of Mauna Ulu, both on Kilauea Volcano, Hawaii. Each one formed where a channelized, high volume flux lava flow encountered a sharp reduction of slope: the flow spread out radially and stalled, forming a well-defined terminal levee enclosing a nearly circular lava pond. We describe a model of how cooling limits the motion of lava spreading radially into a pond and compare this with the case of a channelized flow. The difference in geometry has a major effect, such that the size of a pond is a good indicator of the volume flux of the lava forming it. Lateral spreading on distal shallow slopes is a major factor limiting the lengths of lava flows.

  17. The Ocean: Our Future

    NASA Astrophysics Data System (ADS)

    Independent World Commission On The Oceans; Soares, Mario

    1998-09-01

    The Ocean, Our Future is the official report of the Independent World Commission on the Oceans, chaired by Mário Soares, former President of Portugal. Its aim is to summarize the very real problems affecting the ocean and its future management, and to provide imaginative solutions to these various and interlocking problems. The oceans have traditionally been taken for granted as a source of wealth, opportunity and abundance. Our growing understanding of the oceans has fundamentally changed this perception. We now know that in some areas, abundance is giving way to real scarcity, resulting in severe conflicts. Territorial disputes that threaten peace and security, disruptions to global climate, overfishing, habitat destruction, species extinction, indiscriminate trawling, pollution, the dumping of hazardous and toxic wastes, piracy, terrorism, illegal trafficking and the destruction of coastal communities are among the problems that today form an integral part of the unfolding drama of the oceans. Based on the deliberations, experience and input of more than 100 specialists from around the world, this timely volume provides a powerful overview of the state of our water world.

  18. Flexible ocean upwelling pipe

    DOEpatents

    Person, Abraham

    1980-01-01

    In an ocean thermal energy conversion facility, a cold water riser pipe is releasably supported at its upper end by the hull of the floating facility. The pipe is substantially vertical and has its lower end far below the hull above the ocean floor. The pipe is defined essentially entirely of a material which has a modulus of elasticity substantially less than that of steel, e.g., high density polyethylene, so that the pipe is flexible and compliant to rather than resistant to applied bending moments. The position of the lower end of the pipe relative to the hull is stabilized by a weight suspended below the lower end of the pipe on a flexible line. The pipe, apart from the weight, is positively buoyant. If support of the upper end of the pipe is released, the pipe sinks to the ocean floor, but is not damaged as the length of the line between the pipe and the weight is sufficient to allow the buoyant pipe to come to a stop within the line length after the weight contacts the ocean floor, and thereafter to float submerged above the ocean floor while moored to the ocean floor by the weight. The upper end of the pipe, while supported by the hull, communicates to a sump in the hull in which the water level is maintained below the ambient water level. The sump volume is sufficient to keep the pipe full during heaving of the hull, thereby preventing collapse of the pipe.

  19. BCube Ocean Scenario

    NASA Astrophysics Data System (ADS)

    Santoro, Mattia; Schofield, Oscar; Pearlman, Jay; Nativi, Stefano

    2015-04-01

    To address complex Earth system issues such as climate change and water resources, geoscientists must work across disciplinary boundaries; this requires them to access data outside of their fields. Scientists are being called upon to find, access, and use diverse and voluminous data types that are described with semantics. Within the framework of the NSF EarthCube programme, the BCube project (A Broker Framework for Next Generation Geoscience) is addressing the need for effective and efficient multi-disciplinary collaboration and interoperability through the advancement of brokering technologies. BCube develops science scenarios as key elements in providing an environment for demonstrating capabilities, benefits, and challenges of the developed e-infrastructure. The initial focus is on hydrology, oceans, polar and weather, with the intent to make the technology applicable and available to all the geosciences. This presentation focuses on the BCube ocean scenario. The purpose of this scenario is to increase the understanding of the ocean dynamics through incorporation of a wide range of in-situ and satellite data into ocean models using net primary productivity as the initial variable. The science scenario aims to identify spatial and temporal domains in ocean models, and key ecological variables. Field data sets and remote observations data sets from distributed and heterogeneous systems are accessed through the broker and will be incorporated into the models. In this work we will present the achievements in the development of the BCube ocean scenario.

  20. Effects of dietary linseed oil on innate immune system of Eurasian perch and disease resistance after exposure to Aeromonas salmonicida achromogen.

    PubMed

    Geay, F; Mellery, J; Tinti, E; Douxfils, J; Larondelle, Y; Mandiki, S N M; Kestemont, P

    2015-12-01

    This study was designated to investigate the effects of dietary fish oil (FO diet) replacement by linseed oil (LO diet) on regulation of immune response and disease resistance in Eurasian perch (Perca fluviatilis). A control diet containing fish oil (FO = cod liver oil) and characterized by high levels of n-3 high LC-PUFA (6% EPA, 7.5% of total fatty acids (FAs)) was compared to linseed oil diet (LO diet) composed of low LC-PUFA contents (1% EPA, 2.3% DHA of total FAs) but high C18 fatty acids levels. The experiment was conducted in quadruplicate groups of 80 fish each. After 10 weeks of feeding, the innate immune status was evaluated in various organs (liver, spleen, and head-kidney) (feeding condition). Two days later, a bacterial challenge was performed on fish from 2 rearing conditions: fish infected with Aeromonas salmonicida (bacteria condition) and fish injected with sterile medium but maintained in the same flow system that fish challenged with bacteria (sentinel condition). Three days after injection of bacteria, a significant decrease of lymphocyte, thrombocyte and basophil populations was observed while neutrophils were not affected. In addition, plasma lysozyme activity and reactive oxygen species production in kidney significantly increased in fish challenged with A. salmonicida while the plasma alternative complement pathway activity was not affected. Increase of plasma lysozyme activity as well as reactive oxygen species production in spleen and kidney of sentinel fish suggest that these immune defenses can also be activated, but at lower bacteria concentration than infected fish. No differences in leucocyte populations, plasma lysozyme and alternative complement pathway activities were observed between dietary treatments. Similarly, expression of genes related to eicosanoid synthesis in liver were not affected by the dietary oil source but were strongly stimulated in fish challenged with A. salmonicida. These findings demonstrated that the use of

  1. Isolation over 35 years in a heated biotest basin causes selection on MHC class IIß genes in the European perch (Perca fluviatilis L.)

    PubMed Central

    Björklund, Mats; Aho, Teija; Behrmann-Godel, Jasminca

    2015-01-01

    Genes that play key roles in host immunity such as the major histocompatibility complex (MHC) in vertebrates are expected to be major targets of selection. It is well known that environmental conditions can have an effect on host–parasite interactions and may thus influence the selection on MHC. We analyzed MHC class IIß variability over 35 years in a population of perch (Perca fluviatilis) from the Baltic Sea that was split into two populations separated from each other. One population was subjected to heating from cooling water of a nuclear power plant and was isolated from the surrounding environment in an artificial lake, while the other population was not subjected to any change in water temperature (control). The isolated population experienced a change of the allelic composition and a decrease in allelic richness of MHC genes compared to the control population. The two most common MHC alleles showed cyclic patterns indicating ongoing parasite–host coevolution in both populations, but the alleles that showed a cyclic behavior differed between the two populations. No such patterns were observed at alleles from nine microsatellite loci, and no genetic differentiation was found between populations. We found no indications for a genetic bottleneck in the isolated population during the 35 years. Additionally, differences in parasitism of the current perch populations suggest that a change of the parasite communities has occurred over the isolation period, although the evidence in form of in-depth knowledge of the change of the parasite community over time is lacking. Our results are consistent with the hypothesis of a selective sweep imposed by a change in the parasite community. PMID:25897384

  2. Simple ocean carbon cycle models

    SciTech Connect

    Caldeira, K.; Hoffert, M.I.; Siegenthaler, U.

    1994-02-01

    Simple ocean carbon cycle models can be used to calculate the rate at which the oceans are likely to absorb CO{sub 2} from the atmosphere. For problems involving steady-state ocean circulation, well calibrated ocean models produce results that are very similar to results obtained using general circulation models. Hence, simple ocean carbon cycle models may be appropriate for use in studies in which the time or expense of running large scale general circulation models would be prohibitive. Simple ocean models have the advantage of being based on a small number of explicit assumptions. The simplicity of these ocean models facilitates the understanding of model results.

  3. Interagency Ocean Observing Committee

    NASA Astrophysics Data System (ADS)

    Rome, N. A.

    2013-12-01

    Decades of focused investment in ocean observing and prediction have produced many examples of substantive societal and economic benefit resulting from improved knowledge of ocean and coastal waters and their behavior. Many complex and difficult questions about the ocean remain, including many that have implications for the lives and livelihoods of millions of Americans. The United States has embarked on a series of efforts to develop an ocean observing system capable of addressing broad societal needs. This system is known as the U.S. Integrated Ocean Observing System (U.S. IOOS). The activities and members of the U.S. IOOS community are broad and complex. There are 18 Federal agencies involved in the U.S. IOOS program, as well as 11 U.S. IOOS Regional Associations that encompass efforts focused in U.S. coastal waters, the Great Lakes, and U.S. territories and their waters in the Pacific and the Caribbean. In addition, there are many Federal and academic scientists representing the U.S. Government in various United Nations-sponsored groups that plan and oversee global ocean observation programs. This diverse community is managed largely through cooperation rather than clear directive or budgetary authority, which has contributed to both the strong growth, and the integration weaknesses, of the U.S. IOOS program. The Interagency Ocean Observation Committee (IOOC) is a dynamic group of federal leaders required by Congress to implement procedural, technical, and scientific requirements to ensure full execution of U.S. IOOS. A major focus for the next decade of the IOOC is to help guide comprehensive processes that more fully integrate the requirements, technologies, data/product development and dissemination, testing and modeling efforts across the regional, national, and global sectors of the U.S. IOOS program. This poster/presentation will increase awareness of IOOC efforts to coordinate physical, chemical, and biological observations -- a complementary objective

  4. Ocean Data Acquisition System

    NASA Technical Reports Server (NTRS)

    Johnson, B.; Cavanaugh, J.; Smith, J.; Esaias, W.

    1988-01-01

    The Ocean Data Acquisition System (ODAS) is a low cost instrument with potential commercial application. It is easily mounted on a small aircraft and flown over the coastal zone ocean to remotely measure sea surface temperature and three channels of ocean color information. From this data, chlorophyll levels can be derived for use by ocean scientists, fisheries, and environmental offices. Data can be transmitted to shipboard for real-time use with sea truth measurements, ocean productivity estimates and fishing fleet direction. The aircraft portion of the system has two primary instruments: an IR radiometer to measure sea surface temperature and a three channel visible spectro-radiometer for 460, 490, and 520 nm wavelength measurements from which chlorophyll concentration can be derived. The aircraft package contains a LORAN-C unit for aircraft location information, clock, on-board data processor and formatter, digital data storage, packet radio terminal controller, and radio transceiver for data transmission to a ship. The shipboard package contains a transceiver, packet terminal controller, data processing and storage capability, and printer. Both raw data and chlorophyll concentrations are available for real-time analysis.

  5. Seeking Europa's Ocean

    NASA Astrophysics Data System (ADS)

    Pappalardo, Robert T.

    2010-01-01

    Galileo spacecraft data suggest that a global ocean exists beneath the frozen ice surface Jupiter's moon Europa. Since the early 1970s, planetary scientists have used theoretical and observational arguments to deliberate the existence of an ocean within Europa and other large icy satellites. Galileo magnetometry data indicates an induced magnetic field at Europa, implying a salt water ocean. A paucity of large craters argues for a surface on average only ~40-90 Myr old. Two multi-ring structures suggest that impacts punched through an ice shell ~20 km thick. Europa's ocean and surface are inherently linked through tidal deformation of the floating ice shell, and tidal flexing and nonsynchronous rotation generate stresses that fracture and deform the surface to create ridges and bands. Dark spots, domes, and chaos terrain are probably related to tidally driven ice convection along with partial melting within the ice shell. Europa's geological activity and probable mantle contact permit the chemical ingredients necessary for life to be present within the satellite's ocean. Astonishing geology and high astrobiological potential make Europa a top priority for future spacecraft exploration, with a primary goal of assessing its habitability.

  6. Ocean circulation using altimetry

    NASA Technical Reports Server (NTRS)

    Minster, Jean-Francois; Brossier, C.; Gennero, M. C.; Mazzega, P.; Remy, F.; Letraon, P. Y.; Blanc, F.

    1991-01-01

    Our group has been very actively involved in promoting satellite altimetry as a unique tool for observing ocean circulation and its variability. TOPEX/POSEIDON is particularly interesting as it is optimized for this purpose. It will probably be the first instrument really capable of observing the seasonal and interannual variability of subtropical and polar gyres and the first to eventually document the corresponding variability of their heat flux transport. The studies of these phenomena require data of the best quality, unbiased extraction of the signal, mixing of these satellite data with in situ measurements, and assimilation of the whole set into a dynamic description of ocean circulation. Our group intends to develop responses to all these requirements. We will concentrate mostly on the circulation of the South Atlantic and Indian Oceans: This will be done in close connection with other groups involved in the study of circulation of the tropical Atlantic Ocean, in the altimetry measurements (in particular, those of the tidal issue), and in the techniques of data assimilation in ocean circulation models.

  7. Sub-Ocean Drilling

    NASA Technical Reports Server (NTRS)

    1981-01-01

    The National Science Foundation (NSF) initialized a new phase of exploration last year, a 10 year effort jointly funded by NSF and several major oil companies, known as the Ocean Margin Drilling Program (OMDP). The OMDP requires a ship with capabilities beyond existing drill ships; it must drill in 13,000 feet of water to a depth 20,000 feet below the ocean floor. To meet requirements, NSF is considering the conversion of the government-owned mining ship Glomar Explorer to a deep ocean drilling and coring vessel. Feasibility study performed by Donhaiser Marine, Inc. analyzed the ship's characteristics for suitability and evaluated conversion requirement. DMI utilized COSMIC's Ship Motion and Sea Load Computer program to perform analysis which could not be accomplished by other means. If approved for conversion, Glomar Explorer is expected to begin operations as a drillship in 1984.

  8. Visual observations over oceans

    NASA Technical Reports Server (NTRS)

    Terry, R. D.

    1979-01-01

    Important factors in locating, identifying, describing, and photographing ocean features from space are presented. On the basis of crew comments and other findings, the following recommendations can be made for Earth observations on Space Shuttle missions: (1) flyover exercises must include observations and photography of both temperate and tropical/subtropical waters; (2) sunglint must be included during some observations of ocean features; (3) imaging remote sensors should be used together with conventional photographic systems to document visual observations; (4) greater consideration must be given to scheduling earth observation targets likely to be obscured by clouds; and (5) an annotated photographic compilation of ocean features can be used as a training aid before the mission and as a reference book during space flight.

  9. GNSS Ocean Reflected Signals

    NASA Astrophysics Data System (ADS)

    Hoeg, P.

    2012-12-01

    Ocean reflected signals from the GNSS satellites (received at low-Earth orbiting satellites, airplanes and fixed mountain locations) describe the ocean surface mean height, waves, roughness, spectral reflectivity and emissivity. The estimated accuracy of the average surface height is of the order of 10 cm for smooth conditions. Thus global observations could be an important new contribution to long-term variations of the ocean mean height as well as the monitoring of ocean mesoscale eddies, which result in sea-height changes much larger than the accuracy of the GNSS technique for reflected signals. The ocean reflected signals can be divided into two set of measurements, 1) high elevation measurements (equal to low incidence angles) and 2) low elevation grazing angle measurements. For the first type the ocean reflection cross-section has a limited extent. The reflected signal is coherent with smaller errors due to ocean waves, sampling rate and the internal processing method of the receiver. For low elevations, the signal reveals the incoherent scatter process at the reflection zone. To quantify the potential of the GNSS signals for determining spectral reflectivity at low elevations, we present ocean reflection GPS measurements from the Haleakala Summit on Maui, Hawaii, revealing the spectral characteristics of both the direct satellite signal and the ocean reflected signal for low elevation angles. The characteristics of the reflected signal depend on the scattering properties of the sea surface and the footprint of the reflection zone. While the footprint size and shape in turn depends on the signal incidence angle, the ocean mean tilt, and the relative velocities of transmitter and receiver to the reflection point. Thus the scattering properties of the sea surface are related to the sea surface roughness. We present the spectral properties of the signals as received by a high precision GPS instrument, simultaneously in both phase-locked mode and open-loop raw

  10. Eastern Pacific Ocean Conference

    NASA Astrophysics Data System (ADS)

    The promotion of interaction among investigators of all oceanographic disciplines studying the eastern Pacific Ocean was the goal of the 1990 Eastern Pacific Ocean Conference (EPOC), held October 17-19 on the snow-covered slopes of Mt. Hood, Oreg. Thirty oceanographers representing all disciplines attended.Dick Barber, Duke University Marine Lab, Beaufort, N.C., chaired a session on the eastern equatorial Pacific Ocean, emphasizing issues related to biological activity. Steve Ramp of the Naval Postgraduate School in Montery, Calif., chaired a session on recent results from northern and central California experiments. On October 19, following an early morning earthquake, a business meeting and discussions regarding a collaboration in future experiments were held.

  11. Oceans: our last resource

    SciTech Connect

    Marx, W.

    1981-01-01

    It is widely believed that oceans are vast storehouses of untapped food, energy, minerals, and even living space, but the author warns of a critical turning point in our stewardship of marine resources. The book opens with a history of thoughtless abuse and past mistakes which have eroded and polluted shorelines. Blind hopes for recovery of mineral wealth involve technology that may be prohibitively expensive or logistically impossible, and may have obscured real opportunities, notably the careful management and cultivation of valuable marine resources such as kelp, fish, and shellfish species. The author explores a broad spectrum of alternatives for safeguarding the oceans themselves by following wiser practices on land: methods of using biomass energy to lessen our dependence on offshore mineral development, and possibilities for recycling sewage rather than perceiving the ocean as the ultimate garbage dump. Two appendices present selected information on world fisheries and aquaculture and on the hazards of offshore oil. 319 references.

  12. Ocean energy systems

    NASA Astrophysics Data System (ADS)

    1984-04-01

    The Johns Hopkins University Applied Physics Laboratory is engaged in developing ocean thermal energy conversion (OTEC) systems that are to provide synthetic fuels or an energy intensive product such as ammonia or aluminum. The work also includes assessment and design concepts for hybrid plants, such as geothermal-OTEC plants. The laboratory also has a technical advisory role with respect to DOE/DOET's management of the preliminary design activity of an industry team headed by Ocean Thermal Corporation that is designing an OTEC pilot plant that could be built in shallow water off the shore of Oahu, Hawaii. In addition, the Laboratory is now taking part in a program to evaluate and test the pneumatic wave energy conversion system, an ocean energy device consisting of a turbine that is air driven as a result of wave action in a chamber.

  13. Callisto Cutaway with Ocean

    NASA Technical Reports Server (NTRS)

    1998-01-01

    This artist's concept, a cutaway view of Jupiter's moon Callisto, is based on recent data from NASA's Galileo spacecraft which indicates a salty ocean may lie beneath Callisto's icy crust.

    These findings come as a surprise, since scientists previously believed that Callisto was relatively inactive. If Callisto has an ocean, that would make it more like another Jovian moon, Europa, which has yielded numerous hints of a subsurface ocean. Despite the tantalizing suggestion that there is an ocean layer on Callisto, the possibility that there is life in the ocean remains remote.

    Callisto's cratered surface lies at the top of an ice layer, (depicted here as a whitish band), which is estimated to be about 200 kilometers (124 miles) thick. Immediately beneath the ice, the thinner blue band represents the possible ocean, whose depth must exceed 10 kilometers (6 miles), according to scientists studying data from Galileo's magnetometer. The mottled interior is composed of rock and ice.

    Galileo's magnetometer, which studies magnetic fields around Jupiter and its moons, revealed that Callisto's magnetic field is variable. This may be caused by varying electrical currents flowing near Callisto's surface, in response to changes in the background magnetic field as Jupiter rotates. By studying the data, scientists have determined that the most likely place for the currents to flow would be a layer of melted ice with a high salt content.

    These findings were based on information gathered during Galileo's flybys of Callisto in November 1996, and June and September of 1997. JPL manages the Galileo mission for NASA's Office of Space Science, Washington, DC. This artist's concept and other images and data received from Galileo are posted on the World Wide Web on the Galileo mission home page at http://galileo.jpl.nasa.gov . Background information and educational context for the images can be found at http://www.jpl.nasa.gov/galileo/sepo

  14. Ocean iron cycle

    NASA Astrophysics Data System (ADS)

    Boyd, Philip W.

    Interest in the biogeochemical cycle of iron has grown rapidly over the last two decades, due to the potential role of this element in modulating global climate in the geological past and ocean productivity in the present day. This trace metal has a disproportionately large effect (1 × 105 C:Fe) on photosynthetic carbon fixation by phytoplankton. In around one third of the open ocean, so-called high-nitrate low-chlorophyll (HNLC) regions, the resident phytoplankton have low growth rates despite an abundance of plant nutrients. This is due to the low supply of iron. Iron is present in the ocean in three phases, dissolved, colloidal, and particulate (biogenic and lithogenic). However, iron chemistry is complex with interactions between chemistry and biology such as the production of iron-binding siderophores by oceanic bacteria. This results in the interplay of inorganic chemistry, photochemistry, and organic complexation. Sources of new iron include dust deposition, upwelling of iron-rich deep waters, and the resuspension and lateral transport of sediments. Sinks for iron are mainly biological as evidenced by the vertical nutrient-like profile for dissolved iron in the ocean. Iron is rapidly recycled by the upper ocean biota within a so-called "ferrous wheel." The fe ratio [(new iron)/(new + regenerated iron)] provides an index of the relative supply of iron to the biota by new versus recycled iron. Over the last 15 years, interest in the potential role of iron in shaping climate in the geological past resulted in some of the most ambitious experiments in oceanography: large-scale (i.e., 50-1000 km2) iron enrichment of HNLC waters. They have provided valuable insights into how iron supply influences the biogeochemical cycles of elements such as carbon, sulfur, silicon, nitrogen, and phosphate.

  15. Ocean-sized threats

    NASA Astrophysics Data System (ADS)

    Showstack, Randy

    Jane Lubchenco, professor of marine biology and zoology at Oregon State University, and president-elect of the International Council for Science, said that scientists can do more than they currently are doing to clearly communicate to the public and to policy-makers those issues associated with the many ecological threats faced by the world's oceans. In doing so, scientists can overcome popularly-held misperceptions about the health of the world's oceans and thus, help protect the seas.“Science,” Lubchenco said, “has a huge role to play in informing [the public] what is happening and to guide the choice of solutions.

  16. Inspired by Oceans

    ERIC Educational Resources Information Center

    Leonard, Stephanie

    2005-01-01

    Several years ago, the school system discussed in this article, agreed on a five-year cycle of nature themes to integrate instruction across disciplines. Last year, students studied artists and artworks inspired by oceans. Students also explored the theme with their own artistic expressions. Teachers began the year with lessons based on sea…

  17. Ocean Thermal Energy.

    ERIC Educational Resources Information Center

    Berkovsky, Boris

    1987-01-01

    Describes Ocean Thermal Energy Conservation (OTEC) as a method for exploiting the temperature difference between warm surface waters of the sea and its cold depths. Argues for full-scale demonstrations of the technique for producing energy for coastal regions. (TW)

  18. The Oceanic Crust.

    ERIC Educational Resources Information Center

    Francheteau, Jean

    1983-01-01

    The earth's oceanic crust is created and destroyed in a flow outward from midocean ridges to subduction zones, where it plunges back into the mantle. The nature and dynamics of the crust, instrumentation used in investigations of this earth feature, and research efforts/findings are discussed. (JN)

  19. Enhanced ocean observational capability

    SciTech Connect

    Volpe, A M; Esser, B K

    2000-01-10

    Coastal oceans are vital to world health and sustenance. Technology that enables new observations has always been the driver of discovery in ocean sciences. In this context, we describe the first at sea deployment and operation of an inductively coupled plasma mass spectrometer (ICPMS) for continuous measurement of trace elements in seawater. The purpose of these experiments was to demonstrate that an ICPMS could be operated in a corrosive and high vibration environment with no degradation in performance. Significant advances occurred this past year due to ship time provided by Scripps Institution of Oceanography (UCSD), as well as that funded through this project. Evaluation at sea involved performance testing and characterization of several real-time seawater analysis modes. We show that mass spectrometers can rapidly, precisely and accurately determine ultratrace metal concentrations in seawater, thus allowing high-resolution mapping of large areas of surface seawater. This analytical capability represents a significant advance toward real-time observation and understanding of water mass chemistry in dynamic coastal environments. In addition, a joint LLNL-SIO workshop was convened to define and design new technologies for ocean observation. Finally, collaborative efforts were initiated with atmospheric scientists at LLNL to identify realistic coastal ocean and river simulation models to support real-time analysis and modeling of hazardous material releases in coastal waterways.

  20. Diving into Oceans.

    ERIC Educational Resources Information Center

    Braus, Judy, Ed.

    1992-01-01

    Ranger Rick's NatureScope is a creative education series dedicated to inspiring in children an understanding and appreciation of the natural world while developing the skills they will need to make responsible decisions about the environment. The topic of this issue is "Diving Into Oceans." Contents are organized into the following sections: (1)…

  1. Fukushima and the ocean

    NASA Astrophysics Data System (ADS)

    Buesseler, Ken

    2013-04-01

    The triple disaster of the March 11, 2011 earthquake, tsunami, and subsequent radiation releases at Fukushima Dai-ichi were unprecedented events for the ocean and society. The earthquake was the fourth largest ever recorded; the tsunami resulted in over 20,000 dead or missing and destroyed entire towns; and the radiation releases from the Fukushima Dai-ichi nuclear power plants created the largest accidental release of man-made radionuclides to the oceans in history— a release that continues to this day. Compared to monitoring on land, studies of the ocean are far fewer, yet the area impacted and quantity delivered- 80% of all radioactivity released- is far greater. For oceanographers, this presents a challenge of unprecedented scope and complexity: to understand exactly how these events played out, how radiation continues to move through the marine system (including important seafood items), and, in turn, how best to communicate scientific findings that will inform public policy decisions far into the future. This presentation will provide an overview of the sources and fate of radionuclides released from Fukushima to the ocean. An emphasis will be given on the sources of cesium, its transport in waters, and fluxes associated with sinking particles and accumulation in sediments.

  2. Power from Ocean Waves.

    ERIC Educational Resources Information Center

    Newman, J. N.

    1979-01-01

    Discussed is the utilization of surface ocean waves as a potential source of power. Simple and large-scale wave power devices and conversion systems are described. Alternative utilizations, environmental impacts, and future prospects of this alternative energy source are detailed. (BT)

  3. What's in the Ocean?

    ERIC Educational Resources Information Center

    Smail, James R.

    1981-01-01

    Discusses various aspects of sea water, including: (1) the properties of sea water, (2) the law of relative proportions, (3) the ocean as a buffer, (4) the oxygen in sea water, and (5) the promise of chemical harvest from sea water. (CS)

  4. Oceans '86 conference record

    SciTech Connect

    Not Available

    1986-01-01

    These five volumes represent the proceedings of the Oceans '86 Conference Washington, DC, 23-25 September 1986. Volume 1 includes papers on Underwater Photography and Sensing; Marine Recreation; Diving; CTACTS (Charleston Tactical Aircrew Combat Training System); Offshore and Coastal Structures; Underwater Welding, Burning and Cutting; Advances in Ocean Mapping; Ocean Energy; Biofouling and Corrosion; Moorings, Cables and Connections; Marine Minerals; Remote Sensing and Satellites; and Acoustics Analysis. Volume 2 covers Data Base Management; Modeling and Simulation; Ocean Current Simulation; Instrumentation; Artificial Reefs and Fisheries; US Status and Trends; Education and Technology Transfer; Economic Potential and Coastal Zone Management; and Water Quality. Volume 3 includes papers on National and Regional Monitoring Strategies; New Techniques and Strategies for Monitoring; Indicator Parameters/Organisms; Historical Data; Crystal Cube for Coastal and Estuarine Degradation; and the Monitoring Gap. Volume 4 covers the Organotin Symposium - Chemistry; Toxicity Studies; and Environmental Monitoring and Modeling. Volume 5 includes papers on Advances in Oceanography; Applied Oceanography; Unmanned Vehicles and ROV's; Manned Vehicles; and Oceanographic Ships.

  5. Earth and ocean modeling

    NASA Technical Reports Server (NTRS)

    Knezovich, F. M.

    1976-01-01

    A modular structured system of computer programs is presented utilizing earth and ocean dynamical data keyed to finitely defined parameters. The model is an assemblage of mathematical algorithms with an inherent capability of maturation with progressive improvements in observational data frequencies, accuracies and scopes. The Eom in its present state is a first-order approach to a geophysical model of the earth's dynamics.

  6. Investigating Ocean Pollution.

    ERIC Educational Resources Information Center

    LeBeau, Sue

    1998-01-01

    Describes a fifth-grade class project to investigate two major forms of ocean pollution: plastics and oil. Students work in groups and read, discuss, speculate, offer opinions, and participate in activities such as keeping a plastics journal, testing the biodegradability of plastics, and simulating oil spills. Activities culminate in…

  7. An Ocean of Possibilities

    ERIC Educational Resources Information Center

    Williams, Doug

    2010-01-01

    For more than one hundred years teachers have paddled beside the great ocean of mathematical adventure. Between them they have taught millions of young people. A few have dived in and kept swimming, some have lingered on the shore playing in pools, but most have dipped their toes in and run like heck in the other direction never to return. There…

  8. Clouds over Open Ocean

    NASA Technical Reports Server (NTRS)

    1981-01-01

    The heavy concentration of these cirrocumulus and nimbostratus clouds over open ocean - location unknown, indicate that a heavy downpouring of rain is occuring on the Earth's surface below. Towering anvils, seen rising high above the base cloud cover and casting long shadows, also indicate high winds and possible tornado activity.

  9. Laboratory for Oceans

    NASA Technical Reports Server (NTRS)

    1988-01-01

    A review is made of the activities of the Laboratory for Oceans. The staff and the research activities are nearly evenly divided between engineering and scientific endeavors. The Laboratory contributes engineering design skills to aircraft and ground based experiments in terrestrial and atmospheric sciences in cooperation with scientists from labs in Earth sciences.

  10. Indian Ocean analyses

    NASA Technical Reports Server (NTRS)

    Meyers, Gary

    1992-01-01

    The background and goals of Indian Ocean thermal sampling are discussed from the perspective of a national project which has research goals relevant to variation of climate in Australia. The critical areas of SST variation are identified. The first goal of thermal sampling at this stage is to develop a climatology of thermal structure in the areas and a description of the annual variation of major currents. The sampling strategy is reviewed. Dense XBT sampling is required to achieve accurate, monthly maps of isotherm-depth because of the high level of noise in the measurements caused by aliasing of small scale variation. In the Indian Ocean ship routes dictate where adequate sampling can be achieved. An efficient sampling rate on available routes is determined based on objective analysis. The statistical structure required for objective analysis is described and compared at 95 locations in the tropical Pacific and 107 in the tropical Indian Oceans. XBT data management and quality control methods at CSIRO are reviewed. Results on the mean and annual variation of temperature and baroclinic structure in the South Equatorial Current and Pacific/Indian Ocean Throughflow are presented for the region between northwest Australia and Java-Timor. The mean relative geostrophic transport (0/400 db) of Throughflow is approximately 5 x 106 m3/sec. A nearly equal volume transport is associated with the reference velocity at 400 db. The Throughflow feeds the South Equatorial Current, which has maximum westward flow in August/September, at the end of the southeasterly Monsoon season. A strong semiannual oscillation in the South Java Current is documented. The results are in good agreement with the Semtner and Chervin (1988) ocean general circulation model. The talk concludes with comments on data inadequacies (insufficient coverage, timeliness) particular to the Indian Ocean and suggestions on the future role that can be played by Data Centers, particularly with regard to quality

  11. Ocean Ridges and Oxygen

    NASA Astrophysics Data System (ADS)

    Langmuir, C. H.

    2014-12-01

    The history of oxygen and the fluxes and feedbacks that lead to its evolution through time remain poorly constrained. It is not clear whether oxygen has had discrete steady state levels at different times in Earth's history, or whether oxygen evolution is more progressive, with trigger points that lead to discrete changes in markers such as mass independent sulfur isotopes. Whatever this history may have been, ocean ridges play an important and poorly recognized part in the overall mass balance of oxidants and reductants that contribute to electron mass balance and the oxygen budget. One example is the current steady state O2 in the atmosphere. The carbon isotope data suggest that the fraction of carbon has increased in the Phanerozoic, and CO2 outgassing followed by organic matter burial should continually supply more O2 to the surface reservoirs. Why is O2 not then increasing? A traditional answer to this question would relate to variations in the fraction of burial of organic matter, but this fraction appears to have been relatively high throughout the Phanerozoic. Furthermore, subduction of carbon in the 1/5 organic/carbonate proportions would contribute further to an increasingly oxidized surface. What is needed is a flux of oxidized material out of the system. One solution would be a modern oxidized flux to the mantle. The current outgassing flux of CO2 is ~3.4*1012 moles per year. If 20% of that becomes stored organic carbon, that is a flux of .68*1012 moles per year of reduced carbon. The current flux of oxidized iron in subducting ocean crust is ~2*1012 moles per year of O2 equivalents, based on the Fe3+/Fe2+ ratios in old ocean crust compared to fresh basalts at the ridge axis. This flux more than accounts for the incremental oxidizing power produced by modern life. It also suggests a possible feedback through oxygenation of the ocean. A reduced deep ocean would inhibit oxidation of ocean crust, in which case there would be no subduction flux of oxidized

  12. Ocean energy systems

    SciTech Connect

    Cavanagh, J.E.; Clarke, J.H.; Price, R.

    1993-12-31

    Energy is stored by nature in the tides, waves, and thermal and salinity gradients of the world`s oceans. Although the total energy flux of each of these renewable resources is large, only a small fraction of their potential is likely to be exploited in the foreseeable future. There are two reasons for this. First, ocean energy is spread diffusely over a wide area, requiring large and expensive plants for its collection; and second, the energy is often available in areas remote from centers of consumption. Tidal energy, which entails the use of estuarine barrages at sites having high tidal ranges, offers the best prospects in the short to medium term. Not only are its components commercially available, but many of the best sites for implementation have been identified. Indeed, on the basis of current field experience, tidal power may be regarded as a technically proven, dependable and long-lived source of electric power. The exploitation of wave energy, by comparison, is still in its infancy. Small shoreline and nearshore devices are likely to be developed first, but their applicability and potential is limited. More powerful, large-wave offshore energy plants are unlikely to be deployed for a few decades, although the bulk of ocean-energy potential is located offshore. Ocean thermal energy conversion (OTEC), which is currently in the prototype stage, is costly and largely restricted to tropical locations. Its applications are likely to be limited. Salt-gradient energy, once a focus of interest, is not expected to be exploited in the foreseeable future. Overall, the pace and extent of commercial exploitation of ocean energy is likely to be affected by the rising environmental costs of fossil fuels and by the availability of construction capital at modes real interest rates. If the largest projects are to succeed, however, government support at the national level may be necessary. 42 refs., 13 figs., 4 tabs.

  13. Seasonal Atmospheric and Oceanic Predictions

    NASA Technical Reports Server (NTRS)

    Roads, John; Rienecker, Michele (Technical Monitor)

    2003-01-01

    Several projects associated with dynamical, statistical, single column, and ocean models are presented. The projects include: 1) Regional Climate Modeling; 2) Statistical Downscaling; 3) Evaluation of SCM and NSIPP AGCM Results at the ARM Program Sites; and 4) Ocean Forecasts.

  14. Oceans and Human Health Center

    MedlinePlus

    ocean and human health science can help prevent disease outbreaks and improve public health through a deeper understanding of the causes ... our Center and the field of oceans and human health science. More Research Learn about the research ...

  15. LLNL Ocean General Circulation Model

    Energy Science and Technology Software Center (ESTSC)

    2005-12-29

    The LLNL OGCM is a numerical ocean modeling tool for use in studying ocean circulation over a wide range of space and time scales, with primary applications to climate change and carbon cycle science.

  16. Estimation of Hydraulic Properties Influencing Recharge and Contaminant Transport through Complex Vadose Zones by Analyzing Perched Water Data from the 1994 Large-Scale Infiltration Test at the Idaho National Laboratory

    NASA Astrophysics Data System (ADS)

    Creasey, K. M.; Nimmo, J. R.

    2014-12-01

    Layers of strong geologic contrast within the vadose zone can control recharge and contaminant transport to underlying aquifers. Above the eastern Snake River Plain Aquifer, multiple sedimentary interbeds are interspersed between fractured basalt. These interbeds have a variety of thicknesses and hydraulic properties, and can impede water flow, which allows perched water to collect on the interbeds. The Large-Scale Infiltration Test (LSIT) of 1994 at the Idaho National Laboratory (INL) maintained a circular pond, 200 meters in diameter, at a constant head for 20 days. Monitoring wells were arranged in circles of different radii around and within the pond, and perched water levels on a major sedimentary interbed, 55 meters below ground surface, were measured over time. Data showed that water formed a mound on the interbed before seeping through the interbed. Such behavior is consistent with a hypothesis of rapid flow through the fractured basalt being impeded by the sedimentary interbed. In 2014, the USGS, in cooperation with the U.S. Department of Energy, used a modified version of a Hantush (1967) equation to model the time-dependent perched water table heights from the LSIT as a function of radial distance from the pond center. The modeled volume change between time-steps and the known inflows to the pond were used in a mass balance to estimate the time-varying volume of water seeping through the interbed. This volume of water, the height of perched water, and the interbed thickness were used in Darcy's Law to estimate the effective saturated hydraulic conductivity of the impeding interbed. Results indicate a slightly higher effective conductivity than laboratory measurements of small core samples taken from the interbed, reflecting the presence of fractures or other heterogeneities that facilitate field-scale flow through the interbed. Applied to other locations, this method can improve estimates of recharge and contaminant transport to underlying aquifers.

  17. Whales. Ocean Related Curriculum Activities.

    ERIC Educational Resources Information Center

    Jones, Claire

    The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

  18. Light fields in the ocean

    NASA Technical Reports Server (NTRS)

    Pelevin, V. N.; Kozlyaninov, M. V.

    1981-01-01

    The problem of light fields in the ocean is in basic ocean optics. Twenty-six separate studies discuss: (1) the field of solar radiation in the ocean; (2) stationary and nonstationary light fields created in the sea by artificial sources; and (3) the use of optical methods to study biological and hydrodynamic characteristics of the sea.

  19. Teaching about Oceans. ERIC Digest.

    ERIC Educational Resources Information Center

    Fortner, Rosanne W.

    This ERIC Digest is designed for teachers in grades K-12 to share a rationale for teaching about oceans and briefly introduce the kinds of resources available to assist with such efforts. Topics include: (1) Why teach about oceans?; (2) Where can I get resources for teaching about the ocean?; (3) Who is doing marine education in my area?; (4) What…

  20. Beaches. Ocean Related Curriculum Activities.

    ERIC Educational Resources Information Center

    Marrett, Andrea

    The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

  1. Waterbirds. Ocean Related Curriculum Activities.

    ERIC Educational Resources Information Center

    Russell, Barbara

    The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

  2. Clark Receives Ocean Sciences Award

    NASA Astrophysics Data System (ADS)

    Roman, Michael R.; Clark, H. Lawrence

    2008-09-01

    H. Lawrence Clark received the 2008 Ocean Sciences Award at the 2008 Ocean Sciences Meeting, held 2-7 March 2008 in Orlando, Fla. The award is given in recognition of outstanding and long-standing service to the ocean sciences.

  3. Tides. Ocean Related Curriculum Activities.

    ERIC Educational Resources Information Center

    Marrett, Andrea

    The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

  4. Communicating Ocean Science

    NASA Astrophysics Data System (ADS)

    Halversen, C.; Strang, C.; Penry, D.

    2004-12-01

    NSF's emphasis on educational outreach and the "broader impact" of research has led to a number of programs designed to help scientists share their knowledge and skills in K-12 classrooms. Communicating Ocean Sciences (COS) is a new course being developed as one of the initiatives of the California Center for Ocean Sciences Education Excellence (COSEE). Goals of COS are (1) to promote collaborations between scientists and science educators that help scientists do effective educational outreach, (2) to increase the amount of ocean sciences taught in K-12 classrooms, (3) to provide diverse college role models for K-12 students, especially under-represented students, and 4) to ensure that future scientists are prepared to be effective teachers and to address the broader impacts of their research programs. COS is designed to be co-taught by a research scientist and a science educator or master teacher. The target students for the course are science majors interested in obtaining teaching experience. The course is intended to be offered as part of undergraduate and graduate science programs (at UC Berkeley COS is co-listed by the Departments of Integrative Biology and Earth and Planetary Science). Undergraduate and graduate students are introduced to inquiry-based science teaching and learning theory through activities that focus on ocean sciences content. Pairs of students then apply what they learn by teaching six ocean sciences lessons in K-12 classrooms. Five of the lessons are derived from existing ocean sciences curriculum materials (e.g. MARE curriculum developed by Lawrence Hall of Science). One lesson is developed by the students themselves using the principles and approaches learned in the course. Graduate students receive additional curriculum development and teaching experience to prepare them for likely future roles in university education. COS is in its trial test phase. It was taught for the first time this past spring at UC Berkeley and will be taught at

  5. Remote Sensing of Ocean Color

    NASA Astrophysics Data System (ADS)

    Dierssen, Heidi M.; Randolph, Kaylan

    The oceans cover over 70% of the earth's surface and the life inhabiting the oceans play an important role in shaping the earth's climate. Phytoplankton, the microscopic organisms in the surface ocean, are responsible for half of the photosynthesis on the planet. These organisms at the base of the food web take up light and carbon dioxide and fix carbon into biological structures releasing oxygen. Estimating the amount of microscopic phytoplankton and their associated primary productivity over the vast expanses of the ocean is extremely challenging from ships. However, as phytoplankton take up light for photosynthesis, they change the color of the surface ocean from blue to green. Such shifts in ocean color can be measured from sensors placed high above the sea on satellites or aircraft and is called "ocean color remote sensing." In open ocean waters, the ocean color is predominantly driven by the phytoplankton concentration and ocean color remote sensing has been used to estimate the amount of chlorophyll a, the primary light-absorbing pigment in all phytoplankton. For the last few decades, satellite data have been used to estimate large-scale patterns of chlorophyll and to model primary productivity across the global ocean from daily to interannual timescales. Such global estimates of chlorophyll and primary productivity have been integrated into climate models and illustrate the important feedbacks between ocean life and global climate processes. In coastal and estuarine systems, ocean color is significantly influenced by other light-absorbing and light-scattering components besides phytoplankton. New approaches have been developed to evaluate the ocean color in relationship to colored dissolved organic matter, suspended sediments, and even to characterize the bathymetry and composition of the seafloor in optically shallow waters. Ocean color measurements are increasingly being used for environmental monitoring of harmful algal blooms, critical coastal habitats

  6. Ocean color spectrum calculations

    NASA Technical Reports Server (NTRS)

    Mccluney, W. R.

    1974-01-01

    There is obvious value in developing the means for measuring a number of subsurface oceanographic parameters using remotely sensed ocean color data. The first step in this effort should be the development of adequate theoretical models relating the desired oceanographic parameters to the upwelling radiances to be observed. A portion of a contributory theoretical model can be described by a modified single scattering approach based on a simple treatment of multiple scattering. The resulting quasisingle scattering model can be used to predict the upwelling distribution of spectral radiance emerging from the sea. The shape of the radiance spectrum predicted by this model for clear ocean water shows encouraging agreement with measurements made at the edge of the Sargasso Sea off Cape Hatteras.

  7. Encyclopedia of Ocean Sciences

    NASA Astrophysics Data System (ADS)

    Berger, W. H.

    When I mentioned to a colleague that there was a new, six-volume encyclopedia in ocean sciences that I had agreed to review, all he said was, "That will keep you busy for awhile." Indeed, reviewing 3000-plus pages of condensed matter is quite an order. In addition to simply reading one item after another and skipping a lot, I decided to work with the encyclopedia for a month in a writing project involving general oceanography. On the whole, the Encyclopedia of Ocean Sciences is comprehensive, up-to-date, well illustrated, and well written, and the writing falls somewhere between that of an introductory textbook and a professional review. The marine biology portion, which is large, is particularly accessible. If you are studying oceanography, or teaching it, do gain access to this set of volumes. You will come to treasure it as a great source of information.

  8. Ocean energy systems

    NASA Astrophysics Data System (ADS)

    Progress is reported on the development of Ocean Thermal Energy Conversion (OTEC) systems that will provide synthetic fuels (e.g., methanol), energy-intensive products such as ammonia (for fertilizers and chemicals), and aluminum. The work also includes assessment and design concepts for hybrid plants, such as geothermal-OTEC (GEOTEC) plants. Another effort that began in the spring of 1982 is a technical advisory role to DOE with respect to their management of the conceptual and preliminary design activity of industry teams that are designing a shelf-mounted offshore OTEC pilot plant that could deliver power to Oahu, Hawaii. In addition, a program is underway to evaluate and test the Pneumatic Wave-Energy Conversion System (PWECS), an ocean-energy device consisting of a turbine that is air-driven as a result of wave action in a chamber. The work on the various tasks as of 31 March 1983 is reported.

  9. Microscale ocean dynamics

    NASA Technical Reports Server (NTRS)

    Huang, N.

    1988-01-01

    The detailed dynamics of the micro-scale ocean surface phenomena are studied along with the relationships among the surface signatures with the underlying dynamical processes. The approach to advance the understanding in this area is as follows: (1) Conduct rigorous theoretical studies of the ocean surface wave dynamics and statistical properties; (2) Conduct process-oriented laboratory experiments to verify the theoretical results, and to provide guidance for further studies; and (3) Prepare testable hypotheses for field verifications and comparisons during the ONR/NASA sponsored Surface Wave Dynamics Experiment (SWADE). An analytic model was established for wave breaking probability to study the influence of wave breaking on the spectrum shape in both deep and finite-depth waters. The spectrum was processed along with the structures of the water surface under the influence of wind and existing waves.

  10. Oceanic wave measurement system

    NASA Technical Reports Server (NTRS)

    Holmes, J. F.; Miles, R. T. (Inventor)

    1980-01-01

    An oceanic wave measured system is disclosed wherein wave height is sensed by a barometer mounted on a buoy. The distance between the trough and crest of a wave is monitored by sequentially detecting positive and negative peaks of the output of the barometer and by combining (adding) each set of two successive half cycle peaks. The timing of this measurement is achieved by detecting the period of a half cycle of wave motion.

  11. NASA Oceanic Processes Program

    NASA Technical Reports Server (NTRS)

    1986-01-01

    This, the Sixth Annual Report for NASA's Oceanic Processes Program, provides an overview of recent accomplishments, present activities, and future plans. Although the report was prepared for Fiscal Year 1985 (October 1, 1984 to September 30, 1985), the period covered by the Introduction extends into June 1986. Sections following the Introduction provide summaries of current flight projects and definition studies, brief descriptions of individual research activities, and a bibliography of refereed journal articles appearing within the past two years.

  12. 78 FR 32556 - Safety Zone; 2013 Ocean City Air Show, Atlantic Ocean; Ocean City, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-31

    ...The Coast Guard is establishing a temporary safety zone on the navigable waters of the Atlantic Ocean in the vicinity of Ocean City, MD to support the Ocean City Air Show. This action is intended to restrict vessel traffic movement in the restricted area in order to protect mariners from the hazards associated with air show...

  13. 75 FR 18778 - Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-13

    ... public dockets in the January 17, 2008, issue of the Federal Register (73 FR 3316). Public Meeting We do... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; Ocean City Air Show 2010, Atlantic Ocean, Ocean City, MD AGENCY: Coast Guard, DHS. ACTION: Notice of proposed rulemaking. SUMMARY: The Coast...

  14. 77 FR 22523 - Safety Zone; 2012 Ocean City Air Show; Atlantic Ocean, Ocean City, MD

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-04-16

    ... Federal Register (73 FR 3316). ] Public Meeting We do not now plan to hold a public meeting. But you may... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; 2012 Ocean City Air Show; Atlantic Ocean, Ocean City, MD AGENCY: Coast Guard, DHS. ACTION: Notice of proposed rulemaking. SUMMARY: The Coast...

  15. Efficacy of bath and orally administered praziquantel and fenbendazole against Lepidotrema bidyana Murray, a monogenean parasite of silver perch, Bidyanus bidyanus (Mitchell).

    PubMed

    Forwood, J M; Harris, J O; Deveney, M R

    2013-11-01

    We investigated the efficacy of praziquantel (PZQ) and fenbendazole (FBZ), each administered by bath and orally, against the monogenean Lepidotrema bidyana Murray, a gill parasite of the freshwater fish silver perch, Bidyanus bidyanus (Mitchell). PZQ and FBZ were each administered by bath at 10 mg L⁻¹ for 48 h and on surface-coated feed pellets at 75 mg kg⁻¹ per body weight (BW) per day for 6 days. Bath treatments of PZQ and FBZ had an efficacy of 99% and 91%, respectively, against adult L. bidyana. Oral treatments of PZQ and FBZ had an efficacy of 79% and 95%, respectively, against adult L. bidyana. Fish rejected feed pellets surface-coated with PZQ, suggesting that palatability of surface-coated PZQ-medicated feed is poor, which undermined efficacy. In all trials, some juvenile parasites were present on fish after treatment during efficacy assessment, indicating that efficacy may be lower against juvenile parasites or that recruitment occurred post-treatment, demonstrating that repeat treatments are necessary to effectively control L. bidyana in aquaculture. PMID:23488766

  16. Federal Ocean Energy Technology

    NASA Astrophysics Data System (ADS)

    1987-10-01

    The Department of Energy's (DOE) Ocean Energy Technology (OET) Program is looking for cost-effective ways to harness ocean energy to help power tomorrow's world. Federally sponsored researchers are studying methods to transform the solar heat stored in the ocean's surface waters into electricity as well as new ways to convert wave energy into mechanical energy or electricity. This report provides a summary of research completed during FY86. Four major research areas are addressed in the work covered by this report: Thermodynamic Research and Analysis addresses the process and system analyses which provide the underlying understanding of physical effects which constitute the energy conversion processes, Experimental Verification and Testing provides confirmation of the analytical projections and empirical relationships, Materials and Structural Research addresses special materials compatibility issues related to operation in the sea. Much of its focus is on concepts for the system CWP which is a major technology cost driver, and Oceanographic, Environmental, and Geotechnical Research addresss those unique design requirements imposed by construction in steep slope coastal areas.

  17. Ocean Observations of Climate Change

    NASA Astrophysics Data System (ADS)

    Chambers, Don

    2016-01-01

    The ocean influences climate by storing and transporting large amounts of heat, freshwater, and carbon, and exchanging these properties with the atmosphere. About 93% of the excess heat energy stored by the earth over the last 50 years is found in the ocean. More than three quarters of the total exchange of water between the atmosphere and the earth's surface through evaporation and precipitation takes place over the oceans. The ocean contains 50 times more carbon than the atmosphere and is at present acting to slow the rate of climate change by absorbing one quarter of human emissions of carbon dioxide from fossil fuel burning, cement production, deforestation and other land use change.Here I summarize the observational evidence of change in the ocean, with an emphasis on basin- and global-scale changes relevant to climate. These include: changes in subsurface ocean temperature and heat content, evidence for regional changes in ocean salinity and their link to changes in evaporation and precipitation over the oceans, evidence of variability and change of ocean current patterns relevant to climate, observations of sea level change and predictions over the next century, and biogeochemical changes in the ocean, including ocean acidification.

  18. Ocean-to-Ocean Dissimilarities of Salty Subtropical Surface Water

    NASA Astrophysics Data System (ADS)

    Gordon, A. L.

    2014-12-01

    Each ocean basin displays its own 'personality', reflecting its degree of isolation or connectivity to the global ocean, its place in the interocean exchange network and associated ocean overturning circulation systems, as well as regional circulation and air-sea exchange patterns. While dissimilarities are most notable in the northern hemisphere (the salty North Atlantic vs the fresher North Pacific; as well as the salty Arabian and the fresher Bay of Bengal, a miniature Atlantic/Pacific analog?) far removed from the grand equalizing interocean link of the circum-Antarctic belt, and where large continental blocks impose contrasting forcing, the southern hemisphere ocean basins also display differences. Ocean to ocean dissimilarities are evident in the dry subtropical climate belt, marked by deserts on land and salty surface ocean water. The subtropical sea surface salinity maximum (SSS-max) patterns of 5 the subtropical regimes (the North and South Atlantic, North and South Pacific, and the southern Indian Ocean) display significant dissimilarities in their relative position within their ocean basin, in the structure and seasonality of the SSS-max pattern. The near synoptic coverage of Aquarius and Argo profilers are further defining interannual variability. The South Atlantic SSS-max is pressed against the western boundary, whereas in the other regimes the SSS-max falls within the eastern half of the ocean basin, though the western South Pacific displays a secondary SSS-max. For further details see: A. Gordon, C. Giulivi, J. Busecke, F. Bingham, submitted to the SPURS Oceanography special issue.

  19. Ocean plankton. Patterns and ecological drivers of ocean viral communities.

    PubMed

    Brum, Jennifer R; Ignacio-Espinoza, J Cesar; Roux, Simon; Doulcier, Guilhem; Acinas, Silvia G; Alberti, Adriana; Chaffron, Samuel; Cruaud, Corinne; de Vargas, Colomban; Gasol, Josep M; Gorsky, Gabriel; Gregory, Ann C; Guidi, Lionel; Hingamp, Pascal; Iudicone, Daniele; Not, Fabrice; Ogata, Hiroyuki; Pesant, Stéphane; Poulos, Bonnie T; Schwenck, Sarah M; Speich, Sabrina; Dimier, Celine; Kandels-Lewis, Stefanie; Picheral, Marc; Searson, Sarah; Bork, Peer; Bowler, Chris; Sunagawa, Shinichi; Wincker, Patrick; Karsenti, Eric; Sullivan, Matthew B

    2015-05-22

    Viruses influence ecosystems by modulating microbial population size, diversity, metabolic outputs, and gene flow. Here, we use quantitative double-stranded DNA (dsDNA) viral-fraction metagenomes (viromes) and whole viral community morphological data sets from 43 Tara Oceans expedition samples to assess viral community patterns and structure in the upper ocean. Protein cluster cataloging defined pelagic upper-ocean viral community pan and core gene sets and suggested that this sequence space is well-sampled. Analyses of viral protein clusters, populations, and morphology revealed biogeographic patterns whereby viral communities were passively transported on oceanic currents and locally structured by environmental conditions that affect host community structure. Together, these investigations establish a global ocean dsDNA viromic data set with analyses supporting the seed-bank hypothesis to explain how oceanic viral communities maintain high local diversity. PMID:25999515

  20. Oceanic oxygenation events in the anoxic Ediacaran ocean.

    PubMed

    Sahoo, S K; Planavsky, N J; Jiang, G; Kendall, B; Owens, J D; Wang, X; Shi, X; Anbar, A D; Lyons, T W

    2016-09-01

    The ocean-atmosphere system is typically envisioned to have gone through a unidirectional oxygenation with significant oxygen increases in the earliest (ca. 635 Ma), middle (ca. 580 Ma), or late (ca. 560 Ma) Ediacaran Period. However, temporally discontinuous geochemical data and the patchy metazoan fossil record have been inadequate to chart the details of Ediacaran ocean oxygenation, raising fundamental debates about the timing of ocean oxygenation, its purported unidirectional rise, and its causal relationship, if any, with the evolution of early animal life. To better understand the Ediacaran ocean redox evolution, we have conducted a multi-proxy paleoredox study of a relatively continuous, deep-water section in South China that was paleogeographically connected with the open ocean. Iron speciation and pyrite morphology indicate locally euxinic (anoxic and sulfidic) environments throughout the Ediacaran in this section. In the same rocks, redox sensitive element enrichments and sulfur isotope data provide evidence for multiple oceanic oxygenation events (OOEs) in a predominantly anoxic global Ediacaran-early Cambrian ocean. This dynamic redox landscape contrasts with a recent view of a redox-static Ediacaran ocean without significant change in oxygen content. The duration of the Ediacaran OOEs may be comparable to those of the oceanic anoxic events (OAEs) in otherwise well-oxygenated Phanerozoic oceans. Anoxic events caused mass extinctions followed by fast recovery in biologically diversified Phanerozoic oceans. In contrast, oxygenation events in otherwise ecologically monotonous anoxic Ediacaran-early Cambrian oceans may have stimulated biotic innovations followed by prolonged evolutionary stasis. PMID:27027776