Microbial control of the dark end of the biological pump

PubMed Central

2014-01-01

A fraction of the carbon captured by phytoplankton in the sunlit surface ocean sinks to depth as dead organic matter and faecal material. The microbial breakdown of this material in the subsurface ocean generates carbon dioxide. Collectively, this microbially mediated flux of carbon from the atmosphere to the ocean interior is termed the biological pump. In recent decades it has become clear that the composition of the phytoplankton community in the surface ocean largely determines the quantity and quality of organic matter that sinks to depth. This settling organic matter, however, is not sufficient to meet the energy demands of microbes in the dark ocean. Two additional sources of organic matter have been identified: non-sinking organic particles of debated origin that escape capture by sediment traps and exhibit stable concentrations throughout the dark ocean, and microbes that convert inorganic carbon into organic matter. Whether these two sources can together account for the significant mismatch between organic matter consumption and supply in the dark ocean remains to be seen. It is clear, however, that the microbial community of the deep ocean works in a fundamentally different way from surface water communities. PMID:24707320

The plumbing of the global biological pump: Efficiency control through leaks, pathways, and time scales

NASA Astrophysics Data System (ADS)

Pasquier, Benoît; Holzer, Mark

2016-08-01

We systematically quantify the pathways and time scales that set the efficiency, Ebio, of the global biological pump by applying Green-function-based diagnostics to a data-assimilated phosphorus cycle embedded in a jointly assimilated ocean circulation. We consider "bio pipes" that consist of phosphorus paths that connect specified regions of last biological utilization with regions where regenerated phosphate first reemerges into the euphotic zone. The bio pipes that contribute most to Ebio connect the Eastern Equatorial Pacific (EEqP) and Equatorial Atlantic to the Southern Ocean ((21 ± 3)% of Ebio), as well as the Southern Ocean to itself ((15 ± 3)% of Ebio). The bio pipes with the largest phosphorus flow rates connect the EEqP to itself and the subantarctic Southern Ocean to itself. The global mean sequestration time of the biological pump is 130 ± 70 years, while the sequestration time of the bio pipe from anywhere to the Antarctic region of the Southern Ocean is 430 ± 30 years. The distribution of phosphorus flowing within a given bio pipe is quantified by its transit-time partitioned path density. For the largest bio pipes, ˜1/7 of their phosphorus is carried by thermocline paths with transit times less than ˜300-400 years, while ˜4/7 of their phosphorus is carried by abyssal paths with transit times exceeding ˜700 years. The path density reveals that Antarctic Intermediate Water carries about a third of the regenerated phosphate last utilized in the EEqP that is destined for the Southern Ocean euphotic zone. The Southern Ocean is where (62 ± 2)% of the regenerated inventory and (69 ± 1)% of the preformed inventory first reemerge into the euphotic zone.

A New Desalination Pump Helps Define the pH of Ocean Worlds

NASA Astrophysics Data System (ADS)

Levi, A.; Sasselov, D.

2018-04-01

We study ocean exoplanets, for which the global surface ocean is separated from the rocky interior by a high-pressure ice mantle. We describe a mechanism that can pump salts out of the ocean, resulting in oceans of very low salinity. Here we focus on the H2O–NaCl system, though we discuss the application of this pump to other salts as well. We find our ocean worlds to be acidic, with a pH in the range of 2–4. We discuss and compare between the conditions found within our studied oceans and the conditions in which polyextremophiles were discovered. This work focuses on exoplanets in the super-Earth mass range (∼2 M ⊕), with water composing at least a few percent of their mass. However, the principle of the desalination pump might extend beyond this mass range.

Energy dissipation in slipping biological pumps.

PubMed

Kjelstrup, Signe; Rubi, J Miguel; Bedeaux, Dick

2005-12-07

We describe active transport in slipping biological pumps, using mesoscopic nonequilibrium thermodynamics. The pump operation is characterised by its stochastic nature and energy dissipation. We show how heating as well as cooling effects can be associated with pump operation. We use as an example the well studied active transport of Ca2+ across a biological membrane by means of its ATPase, and use published data to find values for the transport coefficients of the pump under various conditions. Most of the transport coefficients of the pump, including those that relate ATP hydrolysis or synthesis to thermal effects, are estimated. This can give a quantitative description of thermogenesis. We show by calculation that all of these coupling coefficients are significant.

The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model

NASA Astrophysics Data System (ADS)

Ödalen, Malin; Nycander, Jonas; Oliver, Kevin I. C.; Brodeau, Laurent; Ridgwell, Andy

2018-03-01

During the four most recent glacial cycles, atmospheric CO2 during glacial maxima has been lowered by about 90-100 ppm with respect to interglacials. There is widespread consensus that most of this carbon was partitioned in the ocean. It is, however, still debated which processes were dominant in achieving this increased carbon storage. In this paper, we use an Earth system model of intermediate complexity to explore the sensitivity of ocean carbon storage to ocean circulation state. We carry out a set of simulations in which we run the model to pre-industrial equilibrium, but in which we achieve different states of ocean circulation by changing forcing parameters such as wind stress, ocean diffusivity and atmospheric heat diffusivity. As a consequence, the ensemble members also have different ocean carbon reservoirs, global ocean average temperatures, biological pump efficiencies and conditions for air-sea CO2 disequilibrium. We analyse changes in total ocean carbon storage and separate it into contributions by the solubility pump, the biological pump and the CO2 disequilibrium component. We also relate these contributions to differences in the strength of the ocean overturning circulation. Depending on which ocean forcing parameter is tuned, the origin of the change in carbon storage is different. When wind stress or ocean diapycnal diffusivity is changed, the response of the biological pump gives the most important effect on ocean carbon storage, whereas when atmospheric heat diffusivity or ocean isopycnal diffusivity is changed, the solubility pump and the disequilibrium component are also important and sometimes dominant. Despite this complexity, we obtain a negative linear relationship between total ocean carbon and the combined strength of the northern and southern overturning cells. This relationship is robust to different reservoirs dominating the response to different forcing mechanisms. Finally, we conduct a drawdown experiment in which we investigate

Geoengineering impact of open ocean dissolution of olivine on atmospheric CO2, surface ocean pH and marine biology

NASA Astrophysics Data System (ADS)

Köhler, Peter; Abrams, Jesse F.; Völker, Christoph; Hauck, Judith; Wolf-Gladrow, Dieter A.

2013-03-01

Ongoing global warming induced by anthropogenic emissions has opened the debate as to whether geoengineering is a ‘quick fix’ option. Here we analyse the intended and unintended effects of one specific geoengineering approach, which is enhanced weathering via the open ocean dissolution of the silicate-containing mineral olivine. This approach would not only reduce atmospheric CO2 and oppose surface ocean acidification, but would also impact on marine biology. If dissolved in the surface ocean, olivine sequesters 0.28 g carbon per g of olivine dissolved, similar to land-based enhanced weathering. Silicic acid input, a byproduct of the olivine dissolution, alters marine biology because silicate is in certain areas the limiting nutrient for diatoms. As a consequence, our model predicts a shift in phytoplankton species composition towards diatoms, altering the biological carbon pumps. Enhanced olivine dissolution, both on land and in the ocean, therefore needs to be considered as ocean fertilization. From dissolution kinetics we calculate that only olivine particles with a grain size of the order of 1 μm sink slowly enough to enable a nearly complete dissolution. The energy consumption for grinding to this small size might reduce the carbon sequestration efficiency by ˜30%.

Impact of hydrothermalism on the ocean iron cycle

PubMed Central

Resing, Joseph

2016-01-01

As the iron supplied from hydrothermalism is ultimately ventilated in the iron-limited Southern Ocean, it plays an important role in the ocean biological carbon pump. We deploy a set of focused sensitivity experiments with a state of the art global model of the ocean to examine the processes that regulate the lifetime of hydrothermal iron and the role of different ridge systems in governing the hydrothermal impact on the Southern Ocean biological carbon pump. Using GEOTRACES section data, we find that stabilization of hydrothermal iron is important in some, but not all regions. The impact on the Southern Ocean biological carbon pump is dominated by poorly explored southern ridge systems, highlighting the need for future exploration in this region. We find inter-basin differences in the isopycnal layer onto which hydrothermal Fe is supplied between the Atlantic and Pacific basins, which when combined with the inter-basin contrasts in oxidation kinetics suggests a muted influence of Atlantic ridges on the Southern Ocean biological carbon pump. Ultimately, we present a range of processes, operating at distinct scales, that must be better constrained to improve our understanding of how hydrothermalism affects the ocean cycling of iron and carbon. This article is part of the themed issue ‘Biological and climatic impacts of ocean trace element chemistry’. PMID:29035256

Impact of hydrothermalism on the ocean iron cycle.

PubMed

Tagliabue, Alessandro; Resing, Joseph

2016-11-28

As the iron supplied from hydrothermalism is ultimately ventilated in the iron-limited Southern Ocean, it plays an important role in the ocean biological carbon pump. We deploy a set of focused sensitivity experiments with a state of the art global model of the ocean to examine the processes that regulate the lifetime of hydrothermal iron and the role of different ridge systems in governing the hydrothermal impact on the Southern Ocean biological carbon pump. Using GEOTRACES section data, we find that stabilization of hydrothermal iron is important in some, but not all regions. The impact on the Southern Ocean biological carbon pump is dominated by poorly explored southern ridge systems, highlighting the need for future exploration in this region. We find inter-basin differences in the isopycnal layer onto which hydrothermal Fe is supplied between the Atlantic and Pacific basins, which when combined with the inter-basin contrasts in oxidation kinetics suggests a muted influence of Atlantic ridges on the Southern Ocean biological carbon pump. Ultimately, we present a range of processes, operating at distinct scales, that must be better constrained to improve our understanding of how hydrothermalism affects the ocean cycling of iron and carbon.This article is part of the themed issue 'Biological and climatic impacts of ocean trace element chemistry'. © 2016 The Author(s).

Spatial Patterns in the Efficiency of the Biological Pump: What Controls Export Ratios at the Global Scale?

NASA Astrophysics Data System (ADS)

Moore, J. K.

2016-02-01

The efficiency of the biological pump is influenced by complex interactions between chemical, biological, and physical processes. The efficiency of export out of surface waters and down through the water column to the deep ocean has been linked to a number of factors including biota community composition, production of mineral ballast components, physical aggregation and disaggregation processes, and ocean oxygen concentrations. I will examine spatial patterns in the export ratio and the efficiency of the biological pump at the global scale using the Community Earth System Model (CESM). There are strong spatial variations in the export efficiency as simulated by the CESM, which are strongly correlated with new nutrient inputs to the euphotic zone and their impacts on phytoplankton community structure. I will compare CESM simulations that include dynamic, variable export ratios driven by the phytoplankton community structure, with simulations that impose a near-constant export ratio to examine the effects of export efficiency on nutrient and surface chlorophyll distributions. The model predicted export ratios will also be compared with recent satellite-based estimates.

Biological and physical controls in the Southern Ocean on past millennial-scale atmospheric CO2 changes.

PubMed

Gottschalk, Julia; Skinner, Luke C; Lippold, Jörg; Vogel, Hendrik; Frank, Norbert; Jaccard, Samuel L; Waelbroeck, Claire

2016-05-17

Millennial-scale climate changes during the last glacial period and deglaciation were accompanied by rapid changes in atmospheric CO2 that remain unexplained. While the role of the Southern Ocean as a 'control valve' on ocean-atmosphere CO2 exchange has been emphasized, the exact nature of this role, in particular the relative contributions of physical (for example, ocean dynamics and air-sea gas exchange) versus biological processes (for example, export productivity), remains poorly constrained. Here we combine reconstructions of bottom-water [O2], export production and (14)C ventilation ages in the sub-Antarctic Atlantic, and show that atmospheric CO2 pulses during the last glacial- and deglacial periods were consistently accompanied by decreases in the biological export of carbon and increases in deep-ocean ventilation via southern-sourced water masses. These findings demonstrate how the Southern Ocean's 'organic carbon pump' has exerted a tight control on atmospheric CO2, and thus global climate, specifically via a synergy of both physical and biological processes.

Biological and physical controls in the Southern Ocean on past millennial-scale atmospheric CO2 changes

PubMed Central

Gottschalk, Julia; Skinner, Luke C.; Lippold, Jörg; Vogel, Hendrik; Frank, Norbert; Jaccard, Samuel L.; Waelbroeck, Claire

2016-01-01

Millennial-scale climate changes during the last glacial period and deglaciation were accompanied by rapid changes in atmospheric CO2 that remain unexplained. While the role of the Southern Ocean as a 'control valve' on ocean–atmosphere CO2 exchange has been emphasized, the exact nature of this role, in particular the relative contributions of physical (for example, ocean dynamics and air–sea gas exchange) versus biological processes (for example, export productivity), remains poorly constrained. Here we combine reconstructions of bottom-water [O2], export production and 14C ventilation ages in the sub-Antarctic Atlantic, and show that atmospheric CO2 pulses during the last glacial- and deglacial periods were consistently accompanied by decreases in the biological export of carbon and increases in deep-ocean ventilation via southern-sourced water masses. These findings demonstrate how the Southern Ocean's 'organic carbon pump' has exerted a tight control on atmospheric CO2, and thus global climate, specifically via a synergy of both physical and biological processes. PMID:27187527

Nutrient availability and the ultimate control of the biological carbon pump in the western tropical South Pacific Ocean

NASA Astrophysics Data System (ADS)

Moutin, Thierry; Wagener, Thibaut; Caffin, Mathieu; Fumenia, Alain; Gimenez, Audrey; Baklouti, Melika; Bouruet-Aubertot, Pascale; Pujo-Pay, Mireille; Leblanc, Karine; Lefevre, Dominique; Helias Nunige, Sandra; Leblond, Nathalie; Grosso, Olivier; de Verneil, Alain

2018-05-01

between N input by N2 fixation and carbon export. The low iron availability in the SP gyre and P availability in the MA during the stratified period may appear as the ultimate control of N input by N2 fixation. Because of the huge volume of water to consider, and because the SP Ocean is the place of intense denitrification in the east (N sink) and N2 fixation in the west (N source), precise seasonal C, N, P, and iron (Fe) budgets would be of prime interest to understand the efficiency, at the present time and in the future, of the oceanic biological carbon pump.

Oceanic acidification affects marine carbon pump and triggers extended marine oxygen holes.

PubMed

Hofmann, Matthias; Schellnhuber, Hans-Joachim

2009-03-03

Rising atmospheric CO(2) levels will not only drive future global mean temperatures toward values unprecedented during the whole Quaternary but will also lead to massive acidification of sea water. This constitutes by itself an anthropogenic planetary-scale perturbation that could significantly modify oceanic biogeochemical fluxes and severely damage marine biota. As a step toward the quantification of such potential impacts, we present here a simulation-model-based assessment of the respective consequences of a business-as-usual fossil-fuel-burning scenario where a total of 4,075 Petagrams of carbon is released into the atmosphere during the current millennium. In our scenario, the atmospheric pCO(2) level peaks at approximately 1,750 microatm in the year 2200 while the sea-surface pH value drops by >0.7 units on global average, inhibiting the growth of marine calcifying organisms. The study focuses on quantifying 3 major concomitant effects. The first one is a significant (climate-stabilizing) negative feedback on rising pCO(2) levels as caused by the attenuation of biogenic calcification. The second one is related to the biological carbon pump. Because mineral ballast, notably CaCO(3), is found to play a dominant role in carrying organic matter through the water column, a reduction of its export fluxes weakens the strength of the biological carbon pump. There is, however, a third effect with severe consequences: Because organic matter is oxidized in shallow waters when mineral-ballast fluxes weaken, oxygen holes (hypoxic zones) start to expand considerably in the oceans in our model world--with potentially harmful impacts on a variety of marine ecosystems.

Biological production in the Indian Ocean upwelling zones - Part 1: refined estimation via the use of a variable compensation depth in ocean carbon models

NASA Astrophysics Data System (ADS)

Geethalekshmi Sreeush, Mohanan; Valsala, Vinu; Pentakota, Sreenivas; Venkata Siva Rama Prasad, Koneru; Murtugudde, Raghu

2018-04-01

Biological modelling approach adopted by the Ocean Carbon-Cycle Model Intercomparison Project (OCMIP-II) provided amazingly simple but surprisingly accurate rendition of the annual mean carbon cycle for the global ocean. Nonetheless, OCMIP models are known to have seasonal biases which are typically attributed to their bulk parameterisation of compensation depth. Utilising the criteria of surface Chl a-based attenuation of solar radiation and the minimum solar radiation required for production, we have proposed a new parameterisation for a spatially and temporally varying compensation depth which captures the seasonality in the production zone reasonably well. This new parameterisation is shown to improve the seasonality of CO2 fluxes, surface ocean pCO2, biological export and new production in the major upwelling zones of the Indian Ocean. The seasonally varying compensation depth enriches the nutrient concentration in the upper ocean yielding more faithful biological exports which in turn leads to accurate seasonality in the carbon cycle. The export production strengthens by ˜ 70 % over the western Arabian Sea during the monsoon period and achieves a good balance between export and new production in the model. This underscores the importance of having a seasonal balance in the model export and new productions for a better representation of the seasonality of the carbon cycle over upwelling regions. The study also implies that both the biological and solubility pumps play an important role in the Indian Ocean upwelling zones.

Biological proton pumping in an oscillating electric field.

PubMed

Kim, Young C; Furchtgott, Leon A; Hummer, Gerhard

2009-12-31

Time-dependent external perturbations provide powerful probes of the function of molecular machines. Here we study biological proton pumping in an oscillating electric field. The protein cytochrome c oxidase is the main energy transducer in aerobic life, converting chemical energy into an electric potential by pumping protons across a membrane. With the help of master-equation descriptions that recover the key thermodynamic and kinetic properties of this biological "fuel cell," we show that the proton pumping efficiency and the electronic currents in steady state depend significantly on the frequency and amplitude of the applied field, allowing us to distinguish between different microscopic mechanisms of the machine. A spectral analysis reveals dominant reaction steps consistent with an electron-gated pumping mechanism.

Changes in CaCO3 Burial Trump the Biological Pump

NASA Astrophysics Data System (ADS)

Toggweiler, J.; Dunne, J. P.

2008-12-01

The dramatic increases in atmospheric CO2 at the ends of ice ages are usually attributed to a one-two punch coming from the ocean. First, a weakened biological pump vents organically cycled CO2 from the deep ocean via changes in the ventilation of the deep ocean around Antarctica. The initial CO2 increase is then augmented by an enhancement of CaCO3 burial due to a process called CaCO3 compensation (after Broecker, W. S and T.-H. Peng, Global Biogeochem. Cycles, 1, 15-29, 1987). Here, we argue that the importance of the biological pump has been exaggerated. The main effect comes from circulation-induced changes in the burial of CaCO3. As shown in a recent paper by Andreas Schmittner and co-authors (Schmittner, A., E. Brook and J. Ahn, Impact of the ocean's overturning circulation on atmospheric CO2, in Ocean Circulation: Mechanisms and Impacts, Geophys. Monogr. 173, A. Schmittner, J. Chiang, and S. Hemming, eds., pp. 209-246, AGU, 2007) changes in the ventilation of the deep ocean around Antarctica gave rise to 20-30 ppm increases in atmospheric CO2 every 5,000-7,000 years during isotope stages 3 and 4 (30,000 to 70,000 years ago). None of these venting events gave rise to a compensation response. Meanwhile, Jaccard et al. (Science, 308, 1003-1006, 2005) show that all the big CO2 increases during terminations through stage 11 were accompanied by huge increases in CaCO3 burial. This suggests that the enhanced burial of CaCO3 is obligatory rather than compensatory with respect to the dramatic CO2 increases. Broecker and Peng's compensation idea is based on an assumption that the rain of CaCO3 to the sea floor is the same everywhere. More specifically, it assumes that there is no spatial correlation between the production of CaCO3 at the surface and the burial on the sea floor. We find instead that the production and burial of CaCO3 tend to be co-located in regional "hot spots" and that burial in the hot spots balances the input of Ca++ and HCO3- ions in rivers. The

Biological proton pumping in an oscillating electric field

PubMed Central

Kim, Young C.; Furchtgott, Leon A.; Hummer, Gerhard

2010-01-01

Time-dependent external perturbations provide powerful probes of the function of molecular machines. Here we study biological proton pumping in an oscillating electric field. The protein cytochrome c oxidase is the main energy transducer in aerobic life, converting chemical energy into an electric potential by pumping protons across a membrane. With the help of master-equation descriptions that recover the key thermodynamic and kinetic properties of this biological “fuel cell,” we show that the proton pumping efficiency and the electronic currents in steady state both depend significantly and distinctly on the frequency and amplitude of the applied field, allowing us to distinguish between different microscopic mechanisms of the machine. A spectral analysis reveals dominant kinetic modes that show reaction steps consistent with an electron-gated pumping mechanism. PMID:20366348

Enhanced open ocean storage of CO2 from shelf sea pumping.

PubMed

Thomas, Helmuth; Bozec, Yann; Elkalay, Khalid; de Baar, Hein J W

2004-05-14

Seasonal field observations show that the North Sea, a Northern European shelf sea, is highly efficient in pumping carbon dioxide from the atmosphere to the North Atlantic Ocean. The bottom topography-controlled stratification separates production and respiration processes in the North Sea, causing a carbon dioxide increase in the subsurface layer that is ultimately exported to the North Atlantic Ocean. Globally extrapolated, the net uptake of carbon dioxide by coastal and marginal seas is about 20% of the world ocean's uptake of anthropogenic carbon dioxide, thus enhancing substantially the open ocean carbon dioxide storage.

Ocean Fertilization for Sequestration of Carbon Dioxide from the Atmosphere

NASA Astrophysics Data System (ADS)

Boyd, Philip W.

The ocean is a major sink for both preindustrial and anthropogenic carbon dioxide. Both physically and biogeochemically driven pumps, termed the solubility and biological pump, respectively Fig.5.1) are responsible for the majority of carbon sequestration in the ocean's interior [1]. The solubility pump relies on ocean circulation - specifically the impact of cooling of the upper ocean at high latitudes both enhances the solubility of carbon dioxide and the density of the waters which sink to great depth (the so-called deepwater formation) and thereby sequester carbon in the form of dissolved inorganic carbon (Fig.5.1). The biological pump is driven by the availability of preformed plant macronutrients such as nitrate or phosphate which are taken up by phytoplankton during photosynthetic carbon fixation. A small but significant proportion of this fixed carbon sinks into the ocean's interior in the form of settling particles, and in order to maintain equilibrium carbon dioxide from the atmosphere is transferred across the air-sea interface into the ocean (the so-called carbon drawdown) thereby decreasing atmospheric carbon dioxide (Fig.5.1).Fig.5.1

Seasonal copepod lipid pump promotes carbon sequestration in the deep North Atlantic

PubMed Central

Jónasdóttir, Sigrún Huld; Visser, André W.; Richardson, Katherine; Heath, Michael R.

2015-01-01

Estimates of carbon flux to the deep oceans are essential for our understanding of global carbon budgets. Sinking of detrital material (“biological pump”) is usually thought to be the main biological component of this flux. Here, we identify an additional biological mechanism, the seasonal “lipid pump,” which is highly efficient at sequestering carbon into the deep ocean. It involves the vertical transport and metabolism of carbon rich lipids by overwintering zooplankton. We show that one species, the copepod Calanus finmarchicus overwintering in the North Atlantic, sequesters an amount of carbon equivalent to the sinking flux of detrital material. The efficiency of the lipid pump derives from a near-complete decoupling between nutrient and carbon cycling—a “lipid shunt,” and its direct transport of carbon through the mesopelagic zone to below the permanent thermocline with very little attenuation. Inclusion of the lipid pump almost doubles the previous estimates of deep-ocean carbon sequestration by biological processes in the North Atlantic. PMID:26338976

Evaluating Southern Ocean Carbon Eddy-Pump From Biogeochemical-Argo Floats

NASA Astrophysics Data System (ADS)

Llort, Joan; Langlais, C.; Matear, R.; Moreau, S.; Lenton, A.; Strutton, Peter G.

2018-02-01

The vertical transport of surface water and carbon into ocean's interior, known as subduction, is one of the main mechanisms through which the ocean influences Earth's climate. New instrumental approaches have shown the occurrence of localized and intermittent subduction episodes associated with small-scale ocean circulation features. These studies also revealed the importance of such events for the export of organic matter, the so-called eddy-pump. However, the transient and localized nature of episodic subduction hindered its large-scale evaluation to date. In this work, we present an approach to detect subduction events at the scale of the Southern Ocean using measurements collected by biogeochemical autonomous floats (BGCArgo). We show how subduction events can be automatically identified as anomalies of spiciness and Apparent Oxygen Utilization (AOU) below the mixed layer. Using this methodology over more than 4,000 profiles, we detected 40 subduction events unevenly distributed across the Sothern Ocean. Events were more likely found in hot spots of eddy kinetic energy (EKE), downstream major bathymetric features. Moreover, the bio-optical measurements provided by BGCArgo allowed measuring the amount of Particulate Organic Carbon (POC) being subducted and assessing the contribution of these events to the total downward carbon flux at 100 m (EP100). We estimated that the eddy-pump represents less than 19% to the EP100 in the Southern Ocean, although we observed particularly strong events able to locally duplicate the EP100. This approach provides a novel perspective on where episodic subduction occurs that will be naturally improved as BGCArgo observations continue to increase.

Annual Cycles of Deep-ocean, Biogeochemical Export Fluxes and Biological Pump Processes in Subtropical and Subantarctic Waters, Southwest Pacific Ocean

NASA Astrophysics Data System (ADS)

Nodder, S.; Chiswell, S.; Northcote, L.

2016-02-01

One of the key aspects of the global carbon cycle is the efficiency and spatio-temporal variability of the biological pump. In this paper, the annual cycles of particle fluxes, derived from moored sediment trap data collected from 2000-12 in subtropical (STW) and subantarctic waters (SAW), east of New Zealand, are presented. These observations are the most comprehensive export flux time-series from temperate Southern Hemisphere latitudes to date. With high levels of variability, fluxes in SAW were markedly lower than in STW, reflecting the picophytoplankton-dominated communities in the iron-limited, high nutrient-low chlorophyll SAW. Austral spring chlorophyll blooms in surface STW were near-synchronous with elevated fluxes of bio-siliceous, carbonate and organic carbon-rich materials to the deep ocean, probably facilitated by diatom sedimentation. Lithogenic fluxes were also high in STW, compared to SAW, reflecting proximity to the New Zealand landmass. In contrast, the highest biogenic fluxes in SAW occurred in spring when surface chlorophyll concentrations were low, while highest annual chlorophyll concentrations were in summer with no associated flux increase. We hypothesize that the high spring export in SAW occurs from subsurface chlorophyll accumulations that are not evident from remote-sensing satellites. This material was also rich in biogenic silica, perhaps related to the preferential export of diatoms and other silica-producing organisms, such as silicoflagellates and radiolarians. Particle fluxes in STW are similar to that of other mesotrophic to oligotrophic waters ( 6-7 mgC m-2 d-1), whereas export from SAW is below global averages ( 3 mgC m-2 d-1), and is characterized by carbonate-dominated and prominent bio-siliceous deposition.

Annual net community production and the biological carbon flux in the ocean

NASA Astrophysics Data System (ADS)

Emerson, Steven

2014-01-01

The flux of biologically produced organic matter from the surface ocean (the biological pump), over an annual cycle, is equal to the annual net community production (ANCP). Experimental determinations of ANCP at ocean time series sites using a variety of different metabolite mass balances have made it possible to evaluate the accuracy of sediment trap fluxes and satellite-determined ocean carbon export. ANCP values at the Hawaii Ocean Time-series (HOT), the Bermuda Atlantic Time-series Study (BATS), Ocean Station Papa (OSP) are 3 ± 1 mol C m-2 yr-1—much less variable than presently suggested by satellite remote sensing measurements and global circulation models. ANCP determined from mass balances at these locations are 3-4 times particulate organic carbon fluxes measured in sediment traps. When the roles of dissolved organic carbon (DOC) flux, zooplankton migration, and depth-dependent respiration are considered these differences are reconciled at HOT and OSP but not at BATS, where measured particulate fluxes are about 3 times lower than expected. Even in the cases where sediment trap fluxes are accurate, it is not possible to "scale up" these measurements to determine ANCP without independent determinations of geographically variable DOC flux and zooplankton migration. Estimates of ANCP from satellite remote sensing using net primary production determined by the carbon-based productivity model suggests less geographic variability than its predecessor (the vertically generalized productivity model) and brings predictions at HOT and OSP closer to measurements; however, satellite-predicted ANCP at BATS is still 3 times too low.

The biological pump: Profiles of plankton production and consumption in the upper ocean

NASA Astrophysics Data System (ADS)

Longhurst, Alan R.; Glen Harrison, W.

The ‘biological pump’ mediates flux of carbon to the interior of the ocean by interctions between the components of the vertically-structured pelagic ecosystem of the photic zone. Chlorophyll profiles are not a simple indicator of autotrophic biomass or production, because of non-linearities in the physiology of cells and preferential vertical distribution of taxa. Profiles of numbers or biomass of heterotrophs do not correspond with profiles of consumption, because of depth-selection (taxa, seasons) for reasons unconnected with feeding. Depths of highest plant biomass, chlorophyll and growth rate coincide when these depths are shallow, but become progressively separated in profiles where they are deeper - so that highest growth rate lies progressively shallower than the chloropyll maximum. It is still uncertain how plant biomass is distributed in deep profiles. Depths of greatest heterotroph biomass (mesozooplankton) are usually close to depths of fastest plant growth rate, and thus lie shallower than the chlorophyll maximum in profiles where this itself is deep. This correlation is functional, and relates to the role of heterotrophs in excreting metabolic wastes (especially ammonia), which may fuel a significant component of integrated algal production, especially in the oligotrophic ocean. Some, but not all faecal material from mesozooplankton of the photic zone appears in vertical flux below the pycnocine, depending on the size of the source organisms, and the degree of vertical mixing above the pycnocline. Diel, but probably not seasonal, vertical migration is significant in the vertical flux of dissolved nitrogen. Regional generalisations of the vertical relations of the main components of the ‘biological pump’ now appear within reach, and an approach is suggested.

The Southern Ocean biogeochemical divide.

PubMed

Marinov, I; Gnanadesikan, A; Toggweiler, J R; Sarmiento, J L

2006-06-22

Modelling studies have demonstrated that the nutrient and carbon cycles in the Southern Ocean play a central role in setting the air-sea balance of CO(2) and global biological production. Box model studies first pointed out that an increase in nutrient utilization in the high latitudes results in a strong decrease in the atmospheric carbon dioxide partial pressure (pCO2). This early research led to two important ideas: high latitude regions are more important in determining atmospheric pCO2 than low latitudes, despite their much smaller area, and nutrient utilization and atmospheric pCO2 are tightly linked. Subsequent general circulation model simulations show that the Southern Ocean is the most important high latitude region in controlling pre-industrial atmospheric CO(2) because it serves as a lid to a larger volume of the deep ocean. Other studies point out the crucial role of the Southern Ocean in the uptake and storage of anthropogenic carbon dioxide and in controlling global biological production. Here we probe the system to determine whether certain regions of the Southern Ocean are more critical than others for air-sea CO(2) balance and the biological export production, by increasing surface nutrient drawdown in an ocean general circulation model. We demonstrate that atmospheric CO(2) and global biological export production are controlled by different regions of the Southern Ocean. The air-sea balance of carbon dioxide is controlled mainly by the biological pump and circulation in the Antarctic deep-water formation region, whereas global export production is controlled mainly by the biological pump and circulation in the Subantarctic intermediate and mode water formation region. The existence of this biogeochemical divide separating the Antarctic from the Subantarctic suggests that it may be possible for climate change or human intervention to modify one of these without greatly altering the other.

Reduced efficiency of biological pump in the western tropical Pacific

NASA Astrophysics Data System (ADS)

Kim, D.

2016-02-01

The western Pacific warm pool (WPWP) area has recently extended, which may influence considerably the marine ecosystems in the tropical Pacific. Here, we show the long-term trends in particle fluxes associated with the marine ecosystem changes in WPWP area. Total mass and biogenic fluxes have an annually decreasing trend from 2009 to 2014, which is mainly derived by the decrease in the biomass of N2 fixing cyanobacteria during summer. In the western tropical Pacific, the decrease in the biomass of N2 fixing cyanobacteria is attributed to the decrease of phosphate concentration associated with the shoaling of the winter mixed layer depth. The efficiency of biological pump has recently reduced in the western tropical Pacific, which might suppress the oceanic sequestration of atmospheric CO2 and thereby accelerate the global warming in the future.

Dynamic Biological Functioning Important for Simulating and Stabilizing Ocean Biogeochemistry

NASA Astrophysics Data System (ADS)

Buchanan, P. J.; Matear, R. J.; Chase, Z.; Phipps, S. J.; Bindoff, N. L.

2018-04-01

The biogeochemistry of the ocean exerts a strong influence on the climate by modulating atmospheric greenhouse gases. In turn, ocean biogeochemistry depends on numerous physical and biological processes that change over space and time. Accurately simulating these processes is fundamental for accurately simulating the ocean's role within the climate. However, our simulation of these processes is often simplistic, despite a growing understanding of underlying biological dynamics. Here we explore how new parameterizations of biological processes affect simulated biogeochemical properties in a global ocean model. We combine 6 different physical realizations with 6 different biogeochemical parameterizations (36 unique ocean states). The biogeochemical parameterizations, all previously published, aim to more accurately represent the response of ocean biology to changing physical conditions. We make three major findings. First, oxygen, carbon, alkalinity, and phosphate fields are more sensitive to changes in the ocean's physical state. Only nitrate is more sensitive to changes in biological processes, and we suggest that assessment protocols for ocean biogeochemical models formally include the marine nitrogen cycle to assess their performance. Second, we show that dynamic variations in the production, remineralization, and stoichiometry of organic matter in response to changing environmental conditions benefit the simulation of ocean biogeochemistry. Third, dynamic biological functioning reduces the sensitivity of biogeochemical properties to physical change. Carbon and nitrogen inventories were 50% and 20% less sensitive to physical changes, respectively, in simulations that incorporated dynamic biological functioning. These results highlight the importance of a dynamic biology for ocean properties and climate.

Plankton networks driving carbon export in the oligotrophic ocean

NASA Astrophysics Data System (ADS)

Guidi, L.; Chaffron, S.; Bittner, L.; Eveillard, D.; Raes, J.; Karsenti, E.; Bowler, C.; Gorsky, G.

2016-02-01

The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis that sinks to the deep ocean as particles where it is sequestered. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure and interactions driving the process remain largely uncharacterised. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of the underlying processes. We show that specific plankton communities correlate with carbon export and highlight unexpected and overlooked taxa such as Radiolaria, alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical oligotrophic ocean. Additionally, we show that the relative abundance of just a few bacterial and viral genes can predict most of the variability in carbon export in these regions. Together these results help elucidate ecosystem drivers of the biological carbon pump and present a case study for scaling from genes-to-ecosystems.

The export and fate of organic matter in the ocean: New constraints from combining satellite and oceanographic tracer observations

NASA Astrophysics Data System (ADS)

DeVries, Tim; Weber, Thomas

2017-03-01

The ocean's biological pump transfers carbon from the surface euphotic zone into the deep ocean, reducing the atmospheric CO2 concentration. Despite its climatic importance, there are large uncertainties in basic metrics of the biological pump. Previous estimates of the strength of the biological pump, as measured by the amount of organic carbon exported from the euphotic zone, range from about 4 to 12 Pg C yr-1. The fate of exported carbon, in terms of how efficiently it is transferred into the deep ocean, is even more uncertain. Here we present a new model of the biological pump that assimilates satellite and oceanographic tracer observations to constrain rates and patterns of organic matter production, export, and remineralization in the ocean. The data-assimilated model predicts a global particulate organic carbon (POC) flux out of the euphotic zone of ˜9 Pg C yr-1. The particle export ratio (the ratio of POC export to net primary production) is highest at high latitudes and lowest at low latitudes, but low-latitude export is greater than predicted by previous models, in better agreement with observed patterns of long-term carbon export. Particle transfer efficiency (Teff) through the mesopelagic zone is controlled by temperature and oxygen, with highest Teff for high-latitude regions and oxygen minimum zones. In contrast, Teff in the deep ocean (below 1000 m) is controlled by particle sinking speed, with highest deep ocean Teff below the subtropical gyres. These results emphasize the utility of both remote sensing and oceanographic tracer observations for constraining the operation of the biological pump.

Skill Assessment in Ocean Biological Data Assimilation

NASA Technical Reports Server (NTRS)

Gregg, Watson W.; Friedrichs, Marjorie A. M.; Robinson, Allan R.; Rose, Kenneth A.; Schlitzer, Reiner; Thompson, Keith R.; Doney, Scott C.

2008-01-01

There is growing recognition that rigorous skill assessment is required to understand the ability of ocean biological models to represent ocean processes and distributions. Statistical analysis of model results with observations represents the most quantitative form of skill assessment, and this principle serves as well for data assimilation models. However, skill assessment for data assimilation requires special consideration. This is because there are three sets of information in the free-run model, data, and the assimilation model, which uses Data assimilation information from both the flee-run model and the data. Intercom parison of results among the three sets of information is important and useful for assessment, but is not conclusive since the three information sets are intertwined. An independent data set is necessary for an objective determination. Other useful measures of ocean biological data assimilation assessment include responses of unassimilated variables to the data assimilation, performance outside the prescribed region/time of interest, forecasting, and trend analysis. Examples of each approach from the literature are provided. A comprehensive list of ocean biological data assimilation and their applications of skill assessment, in both ecosystem/biogeochemical and fisheries efforts, is summarized.

Surface ocean carbon isotope anomalies on glacial terminations: An alternative view

NASA Astrophysics Data System (ADS)

Lund, D. C.; Cote, M.; Schmittner, A.

2016-12-01

Late Pleistocene glacial terminations are characterized by surface ocean carbon isotope minima on a global scale. During the last deglaciation (i.e. Termination 1), planktonic foraminiferal δ13C anomalies occurred in the Atlantic, Indian, Pacific, and Southern Oceans. Despite the apparently ubiquitous nature of δ13C anomalies on glacial terminations, their cause remains a matter of ongoing debate. The prevailing view is that isotopically light carbon from the abyss was upwelled in the Southern Ocean, resulting in outgassing of 13C-depleted carbon to the atmosphere and its advection to lower latitudes via mode and intermediate waters (Spero and Lea, 2002). Alternatively, carbon isotope minima may be driven by weakening of the biological pump related to circulation-driven changes in the oceanic preformed nutrient budget (Schmittner and Lund, 2015). Here we assess the deep upwelling and biological pump hypotheses using a new compilation of 70 globally-distributed planktonic δ13C records from the published literature. We find that 1) the mean deglacial δ13C anomaly is similar in all ocean basins, 2) the eastern tropical Pacific yields smaller mean δ13C anomalies than the western tropical Pacific, and 3) δ13C anomalies in the Southern Ocean decrease with increasing latitude. Our results are generally inconsistent with the deep upwelling hypothesis, which predicts that the δ13C signal should be largest in the Southern Ocean and upwelling regions. Instead, the spatial pattern in δ13C anomalies supports the biological pump hypothesis, which predicts that reduced export of light carbon from the euphotic zone triggers negative carbon isotope anomalies in the surface ocean and positive anomalies at intermediate depths. Upwelling of relatively 13C-enriched intermediate waters tends to moderate carbon isotope minima in upwelling regions. Our results suggest that the initial rise in atmospheric CO2 during Termination 1 was likely due to weakening of the biological pump

Estuary-ocean connectivity: fast physics, slow biology.

PubMed

Raimonet, Mélanie; Cloern, James E

2017-06-01

Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll-a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll-a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll-a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1-3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll-a in the Bay. These changes reflect a slow biological process of estuary-ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to changing

Estuary-ocean connectivity: Fast physics, slow biology

USGS Publications Warehouse

Raimonet, Mélanie; Cloern, James E.

2017-01-01

Estuaries are connected to both land and ocean so their physical, chemical, and biological dynamics are influenced by climate patterns over watersheds and ocean basins. We explored climate-driven oceanic variability as a source of estuarine variability by comparing monthly time series of temperature and chlorophyll-a inside San Francisco Bay with those in adjacent shelf waters of the California Current System (CCS) that are strongly responsive to wind-driven upwelling. Monthly temperature fluctuations inside and outside the Bay were synchronous, but their correlations weakened with distance from the ocean. These results illustrate how variability of coastal water temperature (and associated properties such as nitrate and oxygen) propagates into estuaries through fast water exchanges that dissipate along the estuary. Unexpectedly, there was no correlation between monthly chlorophyll-a variability inside and outside the Bay. However, at the annual scale Bay chlorophyll-a was significantly correlated with the Spring Transition Index (STI) that sets biological production supporting fish recruitment in the CCS. Wind forcing of the CCS shifted in the late 1990s when the STI advanced 40 days. This shift was followed, with lags of 1–3 years, by 3- to 19-fold increased abundances of five ocean-produced demersal fish and crustaceans and 2.5-fold increase of summer chlorophyll-a in the Bay. These changes reflect a slow biological process of estuary–ocean connectivity operating through the immigration of fish and crustaceans that prey on bivalves, reduce their grazing pressure, and allow phytoplankton biomass to build. We identified clear signals of climate-mediated oceanic variability in this estuary and discovered that the response patterns vary with the process of connectivity and the timescale of ocean variability. This result has important implications for managing nutrient inputs to estuaries connected to upwelling systems, and for assessing their responses to

The role of nutricline depth in regulating the ocean carbon cycle.

PubMed

Cermeño, Pedro; Dutkiewicz, Stephanie; Harris, Roger P; Follows, Mick; Schofield, Oscar; Falkowski, Paul G

2008-12-23

Carbon uptake by marine phytoplankton, and its export as organic matter to the ocean interior (i.e., the "biological pump"), lowers the partial pressure of carbon dioxide (pCO(2)) in the upper ocean and facilitates the diffusive drawdown of atmospheric CO(2). Conversely, precipitation of calcium carbonate by marine planktonic calcifiers such as coccolithophorids increases pCO(2) and promotes its outgassing (i.e., the "alkalinity pump"). Over the past approximately 100 million years, these two carbon fluxes have been modulated by the relative abundance of diatoms and coccolithophores, resulting in biological feedback on atmospheric CO(2) and Earth's climate; yet, the processes determining the relative distribution of these two phytoplankton taxa remain poorly understood. We analyzed phytoplankton community composition in the Atlantic Ocean and show that the distribution of diatoms and coccolithophorids is correlated with the nutricline depth, a proxy of nutrient supply to the upper mixed layer of the ocean. Using this analysis in conjunction with a coupled atmosphere-ocean intermediate complexity model, we predict a dramatic reduction in the nutrient supply to the euphotic layer in the coming century as a result of increased thermal stratification. Our findings indicate that, by altering phytoplankton community composition, this causal relationship may lead to a decreased efficiency of the biological pump in sequestering atmospheric CO(2), implying a positive feedback in the climate system. These results provide a mechanistic basis for understanding the connection between upper ocean dynamics, the calcium carbonate-to-organic C production ratio and atmospheric pCO(2) variations on time scales ranging from seasonal cycles to geological transitions.

The role of North Atlantic Ocean circulation and biological sequestration on atmospheric CO2 uptake during the last deglaciation (CL Division Outstanding ECS Award Lecture)

NASA Astrophysics Data System (ADS)

Muschitiello, Francesco; D'Andrea, William J.; Dokken, Trond M.; Schmittner, Andreas

2017-04-01

Understanding the impact of ocean circulation on the global atmospheric CO2 budget is of paramount importance for anticipating the consequences of projected future changes in Atlantic Meridional Overturning Circulation (AMOC). In particular, the efficiency of the oceanic biological pump can impact atmospheric CO2 through changes in vertical carbon export mediated by variations in the nutrient inventory of the North Atlantic basin. However, the causal relationship between North Atlantic Ocean circulation, biological carbon sequestration, and atmospheric CO2 is poorly understood. Here we present new high-resolution planktic-benthic 14C data and biomarker records from an exceptionally well-dated marine core from the Nordic Seas spanning the last deglaciation ( 15,000-10,000 years BP). The records document for the first time large and rapid atmospheric CO2 drawdowns and increase in plankton stocks during major North Atlantic cooling events. Using transient climate simulations from a fully coupled climate-biosphere model, we show that minor perturbations of the North Atlantic biological pump resulting from surface freshening and AMOC weakening can have a major impact on the global atmospheric CO2 budget. Furthermore, our data help clarifying the timing and magnitude of the deglacial CO2 signal recorded in Antarctic ice cores. We conclude that the global CO2 budget is more sensitive to perturbations in North Atlantic circulation than previously thought, which has significance in the future debate of the AMOC response to anthropogenic warming.

A biologically relevant method for considering patterns of oceanic retention in the Southern Ocean

NASA Astrophysics Data System (ADS)

Mori, Mao; Corney, Stuart P.; Melbourne-Thomas, Jessica; Klocker, Andreas; Sumner, Michael; Constable, Andrew

2017-12-01

Many marine species have planktonic forms - either during a larval stage or throughout their lifecycle - that move passively or are strongly influenced by ocean currents. Understanding these patterns of movement is important for informing marine ecosystem management and for understanding ecological processes generally. Retention of biological particles in a particular area due to ocean currents has received less attention than transport pathways, particularly for the Southern Ocean. We present a method for modelling retention time, based on the half-life for particles in a particular region, that is relevant for biological processes. This method uses geostrophic velocities at the ocean surface, derived from 23 years of satellite altimetry data (1993-2016), to simulate the advection of passive particles during the Southern Hemisphere summer season (from December to March). We assess spatial patterns in the retention time of passive particles and evaluate the processes affecting these patterns for the Indian sector of the Southern Ocean. Our results indicate that the distribution of retention time is related to bathymetric features and the resulting ocean dynamics. Our analysis also reveals a moderate level of consistency between spatial patterns of retention time and observations of Antarctic krill (Euphausia superba) distribution.

Maximum Drawdown of Atmospheric CO2 due to Biological Uptake in the Ocean and the Ocean Temperature Effect

NASA Astrophysics Data System (ADS)

Odalen, M.; Nycander, J.; Oliver, K. I. C.; Nilsson, J.; Brodeau, L.; Ridgwell, A.

2016-02-01

During glacials, atmospheric CO2 is significantly lowered; the decrease is about 1/3 or 90 ppm during the last four glacial cycles. Since the ocean reservoir of carbon, and hence the ocean capacity for storing carbon, is substantially larger than the atmospheric and terrestrial counterparts, it is likely that this lowering was caused by ocean processes, drawing the CO2 into the deep ocean. The Southern Ocean circulation and biological efficiency are widely accepted as having played an important part in this CO2 drawdown. However, the relative effects of different processes contributing to this oceanic uptake have not yet been well constrained. In this work, we focus on better constraining two of these processes; 1) the effect of increased efficiency of the biological carbon uptake, and 2) the effect of changes in global mean ocean temperature on the abiotic ocean-atmosphere CO2 equilibrium. By performing ensemble runs using an Earth System Model of Intermediate Complexity (EMIC) we examine the changes in atmospheric pCO2 achieved by 100% nutrient utilization efficiency of biology. The simulations display different ocean circulation patterns and hence different global ocean mean temperatures. By restoring the atmospheric pCO2 to a target value during the spin-up phase, the total carbon content differs between each of the ensemble members. The difference is due to circulation having direct effects on biology, but also on global ocean mean temperature, changing the solubility of CO2. This study reveals the relative importance of of the processes 1 and 2 (mentioned above) for atmospheric pCO2 in a changed climate. The results of this study also show that a difference in carbon content after spin-up can have a significant effect on the drawdown potential of a maximised biological efficiency. Thus, the choice of spin-up characteristics in a model study of climate change CO2 dynamics may significantly affect the outcome of the study.

Carbon isotope evidence for a vigorous biological pump in the wake of end-Permian mass extinction

NASA Astrophysics Data System (ADS)

Meyer, K. M.; Yu, M.; Jost, A. B.; Payne, J.

2009-12-01

Ocean anoxia and euxinia have long been linked to the end-Permian mass extinction and the subsequent Early Triassic interval of delayed biotic recovery. This anoxic, sulfidic episode has been ascribed to both low- and high-productivity states in the marine water column, leaving the causes of euxinia and the mechanisms underlying delayed recovery poorly understood. To examine the nature of the end-Permian and Early Triassic biological production, we measured the carbon isotopic composition of carbonates from an exceptionally preserved carbonate platform in the Nanpanjiang Basin of south China. 13C of limestones from 5 stratigraphic sections displays a gradient of approximately 4‰ from shallow to deep water within the Lower Triassic. The limestones are systematically enriched in the platform interior relative to coeval slope and basin margin deposits by 2-4‰ at the peaks of correlative positive and negative δ13C excursions. This gradient subsequently collapses to less than 1‰ in the Middle Triassic, coincident with accelerated biotic recovery and cessation of δ13C excursions. Based on the relationship between δ18O and δ13C, trace metal analyses, and lithostratigraphic context, we conclude that the carbon isotope gradient is unlikely to reflect meteoric diagenesis, organic matter remineralization, or changes in the mixing ratio of sediment sources and minerals across the platform. Instead, we interpret the relatively depleted δ13C values toward the basin as reflecting DIC input from 13C-depleted deep waters during early diagenesis in a nutrient-rich, euxinic ocean. These observations suggest that a vigorous prokaryote-driven biological pump sustained Early Triassic ocean anoxia and inhibited recovery of animal ecosystems.

Natural ocean carbon cycle sensitivity to parameterizations of the recycling in a climate model

NASA Astrophysics Data System (ADS)

Romanou, A.; Romanski, J.; Gregg, W. W.

2014-02-01

Sensitivities of the oceanic biological pump within the GISS (Goddard Institute for Space Studies ) climate modeling system are explored here. Results are presented from twin control simulations of the air-sea CO2 gas exchange using two different ocean models coupled to the same atmosphere. The two ocean models (Russell ocean model and Hybrid Coordinate Ocean Model, HYCOM) use different vertical coordinate systems, and therefore different representations of column physics. Both variants of the GISS climate model are coupled to the same ocean biogeochemistry module (the NASA Ocean Biogeochemistry Model, NOBM), which computes prognostic distributions for biotic and abiotic fields that influence the air-sea flux of CO2 and the deep ocean carbon transport and storage. In particular, the model differences due to remineralization rate changes are compared to differences attributed to physical processes modeled differently in the two ocean models such as ventilation, mixing, eddy stirring and vertical advection. GISSEH(GISSER) is found to underestimate mixed layer depth compared to observations by about 55% (10%) in the Southern Ocean and overestimate it by about 17% (underestimate by 2%) in the northern high latitudes. Everywhere else in the global ocean, the two models underestimate the surface mixing by about 12-34%, which prevents deep nutrients from reaching the surface and promoting primary production there. Consequently, carbon export is reduced because of reduced production at the surface. Furthermore, carbon export is particularly sensitive to remineralization rate changes in the frontal regions of the subtropical gyres and at the Equator and this sensitivity in the model is much higher than the sensitivity to physical processes such as vertical mixing, vertical advection and mesoscale eddy transport. At depth, GISSER, which has a significant warm bias, remineralizes nutrients and carbon faster thereby producing more nutrients and carbon at depth, which

Natural Ocean Carbon Cycle Sensitivity to Parameterizations of the Recycling in a Climate Model

NASA Technical Reports Server (NTRS)

Romanou, A.; Romanski, J.; Gregg, W. W.

2014-01-01

Sensitivities of the oceanic biological pump within the GISS (Goddard Institute for Space Studies ) climate modeling system are explored here. Results are presented from twin control simulations of the air-sea CO2 gas exchange using two different ocean models coupled to the same atmosphere. The two ocean models (Russell ocean model and Hybrid Coordinate Ocean Model, HYCOM) use different vertical coordinate systems, and therefore different representations of column physics. Both variants of the GISS climate model are coupled to the same ocean biogeochemistry module (the NASA Ocean Biogeochemistry Model, NOBM), which computes prognostic distributions for biotic and abiotic fields that influence the air-sea flux of CO2 and the deep ocean carbon transport and storage. In particular, the model differences due to remineralization rate changes are compared to differences attributed to physical processes modeled differently in the two ocean models such as ventilation, mixing, eddy stirring and vertical advection. GISSEH(GISSER) is found to underestimate mixed layer depth compared to observations by about 55% (10 %) in the Southern Ocean and overestimate it by about 17% (underestimate by 2%) in the northern high latitudes. Everywhere else in the global ocean, the two models underestimate the surface mixing by about 12-34 %, which prevents deep nutrients from reaching the surface and promoting primary production there. Consequently, carbon export is reduced because of reduced production at the surface. Furthermore, carbon export is particularly sensitive to remineralization rate changes in the frontal regions of the subtropical gyres and at the Equator and this sensitivity in the model is much higher than the sensitivity to physical processes such as vertical mixing, vertical advection and mesoscale eddy transport. At depth, GISSER, which has a significant warm bias, remineralizes nutrients and carbon faster thereby producing more nutrients and carbon at depth, which

Mesoscale eddies drive increased silica export in the subtropical Pacific Ocean.

PubMed

Benitez-Nelson, Claudia R; Bidigare, Robert R; Dickey, Tommy D; Landry, Michael R; Leonard, Carrie L; Brown, Susan L; Nencioli, Francesco; Rii, Yoshimi M; Maiti, Kanchan; Becker, Jamie W; Bibby, Thomas S; Black, Wil; Cai, Wei-Jun; Carlson, Craig A; Chen, Feizhou; Kuwahara, Victor S; Mahaffey, Claire; McAndrew, Patricia M; Quay, Paul D; Rappé, Michael S; Selph, Karen E; Simmons, Melinda P; Yang, Eun Jin

2007-05-18

Mesoscale eddies may play a critical role in ocean biogeochemistry by increasing nutrient supply, primary production, and efficiency of the biological pump, that is, the ratio of carbon export to primary production in otherwise nutrient-deficient waters. We examined a diatom bloom within a cold-core cyclonic eddy off Hawaii. Eddy primary production, community biomass, and size composition were markedly enhanced but had little effect on the carbon export ratio. Instead, the system functioned as a selective silica pump. Strong trophic coupling and inefficient organic export may be general characteristics of community perturbation responses in the warm waters of the Pacific Ocean.

Southern Ocean biogeochemical control of glacial/interglacial carbon dioxide change

NASA Astrophysics Data System (ADS)

Sigman, D. M.

2014-12-01

In the effort to explain the lower atmospheric CO2 concentrations observed during ice ages, two of the first hypotheses involved redistributing dissolved inorganic carbon (DIC) within the ocean. Broecker (1982) proposed a strengthening of the ocean's biological pump during ice ages, which increased the dissolved inorganic carbon gradient between the dark, voluminous ocean interior and the surface ocean's sun-lit, wind-mixed layer. Boyle (1988) proposed a deepening in the ocean interior's pool of DIC associated with organic carbon regeneration, with its concentration maximum shifting from intermediate to abyssal depths. While not irrefutable, evidence has arisen that these mechanisms can explain much of the ice age CO2 reduction and that both were activated by changes in the Southern Ocean. In the Antarctic Zone, reduced exchange of water between the surface and the underlying ocean sequestered more DIC in the ocean interior (the biological pump mechanism). Dust-borne iron fertilization of the Subantarctic surface lowered CO2 partly by the biological pump mechanism and partly by Boyle's carbon deepening. Each mechanism owes a part of its CO2 effect to a transient increase in seafloor calcium carbonate dissolution, which raised the ice age ocean's alkalinity, causing it to absorb more CO2. However, calcium carbonate cycling also sets limits on these mechanisms and their CO2 effects, such that the combination of Antarctic and Subantarctic changes is needed to achieve the full (80-100 ppm) ice age CO2 decline. Data suggest that these changes began at different phases in the development of the last ice age, 110 and 70 ka, respectively, explaining a 40 ppm CO2 drop at each time. We lack a robust understanding of the potential causes for both the implied reduction in Antarctic surface/deep exchange and the increase in Subantarctic dust supply during ice ages. Thus, even if the evidence for these Southern Ocean changes were to become incontrovertible, conceptual gaps stand

Plankton networks driving carbon export in the oligotrophic ocean

PubMed Central

Larhlimi, Abdelhalim; Roux, Simon; Darzi, Youssef; Audic, Stephane; Berline, Léo; Brum, Jennifer; Coelho, Luis Pedro; Espinoza, Julio Cesar Ignacio; Malviya, Shruti; Sunagawa, Shinichi; Dimier, Céline; Kandels-Lewis, Stefanie; Picheral, Marc; Poulain, Julie; Searson, Sarah; Stemmann, Lars; Not, Fabrice; Hingamp, Pascal; Speich, Sabrina; Follows, Mick; Karp-Boss, Lee; Boss, Emmanuel; Ogata, Hiroyuki; Pesant, Stephane; Weissenbach, Jean; Wincker, Patrick; Acinas, Silvia G.; Bork, Peer; de Vargas, Colomban; Iudicone, Daniele; Sullivan, Matthew B.; Raes, Jeroen; Karsenti, Eric; Bowler, Chris; Gorsky, Gabriel

2015-01-01

The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis, exported through sinking particles, and finally sequestered in the deep ocean. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure driving the process remains largely uncharacterised. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of carbon export in the oligotrophic ocean. We show that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and highlight unexpected taxa such as Radiolaria, alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical, nutrient-depleted, oligotrophic ocean. Additionally, we show that the relative abundance of just a few bacterial and viral genes can predict most of the variability in carbon export in these regions. PMID:26863193

Plankton networks driving carbon export in the oligotrophic ocean

NASA Astrophysics Data System (ADS)

2016-04-01

The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis, exported through sinking particles, and finally sequestered in the deep ocean. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure driving the process remains largely uncharacterized. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of carbon export in the oligotrophic ocean. We show that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and highlight unexpected taxa such as Radiolaria and alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical, nutrient-depleted, oligotrophic ocean. Additionally, we show that the relative abundance of a few bacterial and viral genes can predict a significant fraction of the variability in carbon export in these regions.

The role of mixotrophic protists in the biological carbon pump

NASA Astrophysics Data System (ADS)

Mitra, A.; Flynn, K. J.; Burkholder, J. M.; Berge, T.; Calbet, A.; Raven, J. A.; Granéli, E.; Glibert, P. M.; Hansen, P. J.; Stoecker, D. K.; Thingstad, F.; Tillmann, U.; Våge, S.; Wilken, S.; Zubkov, M. V.

2013-08-01

The traditional view of the planktonic foodweb describes consumption of inorganic nutrients by photo-autotrophic phytoplankton, which in turn supports zooplankton and ultimately higher trophic levels. Pathways centred on bacteria provide mechanisms for nutrient recycling. This structure lies at the foundation of most models used to explore biogeochemical cycling, functioning of the biological pump, and the impact of climate change on these processes. We suggest an alternative paradigm, which sees the bulk of the base of this foodweb supported by protist plankton (phytoplankton and microzooplankton) communities that are mixotrophic - combining phototrophy and phagotrophy within a~single cell. The photoautotrophic eukaryotic plankton and their heterotrophic microzooplankton grazers dominate only within immature environments (e.g., spring bloom in temperate systems). With their flexible nutrition, mixotrophic protists dominate in more mature systems (e.g., temperate summer, established eutrophic systems and oligotrophic systems); the more stable water columns suggested under climate change may also be expected to favour these mixotrophs. We explore how such a predominantly mixotrophic structure affects microbial trophic dynamics and the biological pump. The mixotroph dominated structure differs fundamentally in its flow of energy and nutrients, with a shortened and potentially more efficient chain from nutrient regeneration to primary production. Furthermore, mixotrophy enables a direct conduit for the support of primary production from bacterial production. We show how the exclusion of an explicit mixotrophic component in studies of the pelagic microbial communities leads to a failure to capture the true dynamics of the carbon flow. In order to prevent a misinterpretation of the full implications of climate change upon biogeochemical cycling and the functioning of the biological pump, we recommend inclusion of multi-nutrient mixotroph models within ecosystem studies.

Understanding the recent changes in the Southern Ocean carbon cycle: A multidisciplinary approach

NASA Astrophysics Data System (ADS)

Manizza, M.; Kahru, M.; Menemenlis, D.; Nevison, C. D.; Mitchell, B. G.; Keeling, R. F.

2016-12-01

The Southern Ocean represents a key area of the global ocean for the uptake of the CO2 originating from fossil fuels emissions. In these waters, cold temperatures combined with high rates of biological production drive the carbon uptake that accounts for about one-third of the global ocean uptake.Recent studies showed that changes in the Southern Annular Mode (SAM) index, mainly a proxy of the intensity of westerly winds, had a significant impact on the temporal variability of the CO2 uptake in the Southern Ocean. In order to shed light on this problem we propose to use both satellite-derived estimates of ocean productivity and carbon export in combinations of ocean physical and biogeochemical state estimates focusing on the 2006-2013 period. While the estimates of carbon fixation and export based on remote sensing will provide key information on the spatial and temporal variations of the biological carbon pump, the ocean state estimates will provide additional information on physical and carbon cycle processes, including the air-sea CO2 fluxes of the Southern Ocean in the 2006-2013 period where model solutions have been optimized.These physical estimates will be used to force an ocean biogeochemical model (ECCO2-Darwin) that will compute the CO2 uptake for each year. The physical model, forced with optimized atmospheric forcing, aims to realistically simulate interannual ocean climate variability that drives changes in both physical and biogeochemical processes ultimately impacting the carbon uptake of the Southern Ocean, and potentially responding to the SAM index variations.Although in this study great emphasis is given to the role of physical climate variations at driving the CO2 uptake of these polar waters, we will integrate model results with estimates from remote sensing techniques to better understand role of the biological carbon pump and its variability potentially responding to the SAM index changes.

Changes in ocean circulation and carbon storage are decoupled from air-sea CO2 fluxes

NASA Astrophysics Data System (ADS)

Marinov, I.; Gnanadesikan, A.

2011-02-01

The spatial distribution of the air-sea flux of carbon dioxide is a poor indicator of the underlying ocean circulation and of ocean carbon storage. The weak dependence on circulation arises because mixing-driven changes in solubility-driven and biologically-driven air-sea fluxes largely cancel out. This cancellation occurs because mixing driven increases in the poleward residual mean circulation result in more transport of both remineralized nutrients and heat from low to high latitudes. By contrast, increasing vertical mixing decreases the storage associated with both the biological and solubility pumps, as it decreases remineralized carbon storage in the deep ocean and warms the ocean as a whole.

Changes in ocean circulation and carbon storage are decoupled from air-sea CO2 fluxes

NASA Astrophysics Data System (ADS)

Marinov, I.; Gnanadesikan, A.

2010-11-01

The spatial distribution of the air-sea flux of carbon dioxide is a poor indicator of the underlying ocean circulation and of ocean carbon storage. The weak dependence on circulation arises because mixing-driven changes in solubility-driven and biologically-driven air-sea fluxes largely cancel out. This cancellation occurs because mixing driven increases in the poleward residual mean circulation results in more transport of both remineralized nutrients and heat from low to high latitudes. By contrast, increasing vertical mixing decreases the storage associated with both the biological and solubility pumps, as it decreases remineralized carbon storage in the deep ocean and warms the ocean as a whole.

Tara Oceans: Eco-Systems Biology at Planetary Scale

NASA Astrophysics Data System (ADS)

Bowler, C.; Malviya, S.

2016-02-01

The ocean is the largest ecosystem on Earth and yet we know very little about the plankton that drift within. To increase our understanding of this underexplored world a multidisciplinary consortium, Tara Oceans, was formed around the 110-ft research schooner Tara, which sampled plankton at more than 210 sites and multiple depth layers in all the major oceanic regions during expeditions from 2009-2013 (Karsenti et al. Plos Biol., 2011). The presentation will describe the first foundational resources from the project (based on a first data freeze from 579 samples at 75 stations; see Science special issue May 22, 2015) and their initial analyses, illustrating several aspects of the Tara Oceans' eco-systems biology approach. The project provides unique resources for several scientific disciplines, capturing biodiversity of a wide range of organisms that are rarely studied together, exploring interactions between them and integrating them with environmental conditions to further our understanding of life in the ocean and beyond in the context of ongoing climate changes.

Satellite Ocean Biology: Past, Present, Future

NASA Technical Reports Server (NTRS)

McClain, Charles R.

2012-01-01

Since 1978 when the first satellite ocean color proof-of-concept sensor, the Nimbus-7 Coastal Zone Color Scanner, was launched, much progress has been made in refining the basic measurement concept and expanding the research applications of global satellite time series of biological and optical properties such as chlorophyll-a concentrations. The seminar will review the fundamentals of satellite ocean color measurements (sensor design considerations, on-orbit calibration, atmospheric corrections, and bio-optical algorithms), scientific results from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) and Moderate resolution Imaging Spectroradiometer (MODIS) missions, and the goals of future NASA missions such as PACE, the Aerosol, Cloud, Ecology (ACE), and Geostationary Coastal and Air Pollution Events (GeoCAPE) missions.

Southern Ocean biological iron cycling in the pre-whaling and present ecosystems

NASA Astrophysics Data System (ADS)

Maldonado, Maria T.; Surma, Szymon; Pakhomov, Evgeny A.

2016-11-01

This study aimed to create the first model of biological iron (Fe) cycling in the Southern Ocean food web. Two biomass mass-balanced Ecopath models were built to represent pre- and post-whaling ecosystem states (1900 and 2008). Functional group biomasses (tonnes wet weight km-2) were converted to biogenic Fe pools (kg Fe km-2) using published Fe content ranges. In both models, biogenic Fe pools and consumption in the pelagic Southern Ocean were highest for plankton and small nektonic groups. The production of plankton biomass, particularly unicellular groups, accounted for the highest annual Fe demand. Microzooplankton contributed most to biological Fe recycling, followed by carnivorous zooplankton and krill. Biological Fe recycling matched previous estimates, and, under most conditions, could entirely meet the Fe demand of bacterioplankton and phytoplankton. Iron recycling by large baleen whales was reduced 10-fold by whaling between 1900 and 2008. However, even under the 1900 scenario, the contribution of whales to biological Fe recycling was negligible compared with that of planktonic consumers. These models are a first step in examining oceanic-scale biological Fe cycling, highlighting gaps in our present knowledge and key questions for future research on the role of marine food webs in the cycling of trace elements in the sea. This article is part of the themed issue 'Biological and climatic impacts of ocean trace element chemistry'.

Southern Ocean biological iron cycling in the pre-whaling and present ecosystems.

PubMed

Maldonado, Maria T; Surma, Szymon; Pakhomov, Evgeny A

2016-11-28

This study aimed to create the first model of biological iron (Fe) cycling in the Southern Ocean food web. Two biomass mass-balanced Ecopath models were built to represent pre- and post-whaling ecosystem states (1900 and 2008). Functional group biomasses (tonnes wet weight km -2 ) were converted to biogenic Fe pools (kg Fe km -2 ) using published Fe content ranges. In both models, biogenic Fe pools and consumption in the pelagic Southern Ocean were highest for plankton and small nektonic groups. The production of plankton biomass, particularly unicellular groups, accounted for the highest annual Fe demand. Microzooplankton contributed most to biological Fe recycling, followed by carnivorous zooplankton and krill. Biological Fe recycling matched previous estimates, and, under most conditions, could entirely meet the Fe demand of bacterioplankton and phytoplankton. Iron recycling by large baleen whales was reduced 10-fold by whaling between 1900 and 2008. However, even under the 1900 scenario, the contribution of whales to biological Fe recycling was negligible compared with that of planktonic consumers. These models are a first step in examining oceanic-scale biological Fe cycling, highlighting gaps in our present knowledge and key questions for future research on the role of marine food webs in the cycling of trace elements in the sea.This article is part of the themed issue 'Biological and climatic impacts of ocean trace element chemistry'. © 2016 The Author(s).

Light penetration structures the deep acoustic scattering layers in the global ocean.

PubMed

Aksnes, Dag L; Røstad, Anders; Kaartvedt, Stein; Martinez, Udane; Duarte, Carlos M; Irigoien, Xabier

2017-05-01

The deep scattering layer (DSL) is a ubiquitous acoustic signature found across all oceans and arguably the dominant feature structuring the pelagic open ocean ecosystem. It is formed by mesopelagic fishes and pelagic invertebrates. The DSL animals are an important food source for marine megafauna and contribute to the biological carbon pump through the active flux of organic carbon transported in their daily vertical migrations. They occupy depths from 200 to 1000 m at daytime and migrate to a varying degree into surface waters at nighttime. Their daytime depth, which determines the migration amplitude, varies across the global ocean in concert with water mass properties, in particular the oxygen regime, but the causal underpinning of these correlations has been unclear. We present evidence that the broad variability in the oceanic DSL daytime depth observed during the Malaspina 2010 Circumnavigation Expedition is governed by variation in light penetration. We find that the DSL depth distribution conforms to a common optical depth layer across the global ocean and that a correlation between dissolved oxygen and light penetration provides a parsimonious explanation for the association of shallow DSL distributions with hypoxic waters. In enhancing understanding of this phenomenon, our results should improve the ability to predict and model the dynamics of one of the largest animal biomass components on earth, with key roles in the oceanic biological carbon pump and food web.

46 CFR 56.50-55 - Bilge pumps.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Type of vessel Waters navigated Power pumps (1) Hand pumps Sailing Ocean and coastwise Two (2) Manned... Vessels Vessel length, in feet Passenger vessels 1 International voyages 3 Ocean, coast-wise and Great Lakes All other waters Dry-cargo vessels 2 Ocean, coast-wise and Great Lakes All waters Tankvessels All...

46 CFR 56.50-55 - Bilge pumps.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Type of vessel Waters navigated Power pumps (1) Hand pumps Sailing Ocean and coastwise Two (2) Manned... Vessels Vessel length, in feet Passenger vessels 1 International voyages 3 Ocean, coast-wise and Great Lakes All other waters Dry-cargo vessels 2 Ocean, coast-wise and Great Lakes All waters Tankvessels All...

46 CFR 56.50-55 - Bilge pumps.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Type of vessel Waters navigated Power pumps (1) Hand pumps Sailing Ocean and coastwise Two (2) Manned... Vessels Vessel length, in feet Passenger vessels 1 International voyages 3 Ocean, coast-wise and Great Lakes All other waters Dry-cargo vessels 2 Ocean, coast-wise and Great Lakes All waters Tankvessels All...

The role of mixotrophic protists in the biological carbon pump

NASA Astrophysics Data System (ADS)

Mitra, A.; Flynn, K. J.; Burkholder, J. M.; Berge, T.; Calbet, A.; Raven, J. A.; Granéli, E.; Glibert, P. M.; Hansen, P. J.; Stoecker, D. K.; Thingstad, F.; Tillmann, U.; Våge, S.; Wilken, S.; Zubkov, M. V.

2014-02-01

The traditional view of the planktonic food web describes consumption of inorganic nutrients by photoautotrophic phytoplankton, which in turn supports zooplankton and ultimately higher trophic levels. Pathways centred on bacteria provide mechanisms for nutrient recycling. This structure lies at the foundation of most models used to explore biogeochemical cycling, functioning of the biological pump, and the impact of climate change on these processes. We suggest an alternative new paradigm, which sees the bulk of the base of this food web supported by protist plankton communities that are mixotrophic - combining phototrophy and phagotrophy within a single cell. The photoautotrophic eukaryotic plankton and their heterotrophic microzooplankton grazers dominate only during the developmental phases of ecosystems (e.g. spring bloom in temperate systems). With their flexible nutrition, mixotrophic protists dominate in more-mature systems (e.g. temperate summer, established eutrophic systems and oligotrophic systems); the more-stable water columns suggested under climate change may also be expected to favour these mixotrophs. We explore how such a predominantly mixotrophic structure affects microbial trophic dynamics and the biological pump. The mixotroph-dominated structure differs fundamentally in its flow of energy and nutrients, with a shortened and potentially more efficient chain from nutrient regeneration to primary production. Furthermore, mixotrophy enables a direct conduit for the support of primary production from bacterial production. We show how the exclusion of an explicit mixotrophic component in studies of the pelagic microbial communities leads to a failure to capture the true dynamics of the carbon flow. In order to prevent a misinterpretation of the full implications of climate change upon biogeochemical cycling and the functioning of the biological pump, we recommend inclusion of multi-nutrient mixotroph models within ecosystem studies.

46 CFR 56.50-55 - Bilge pumps.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Type of vessel Waters navigated Power pumps (1) Hand pumps Sailing Ocean and coastwise Two (2) Manned... Vessels Vessel length, in feet Passenger vessels 1 International voyages 3 Ocean, coast-wise and Great Lakes All other waters Dry-cargo vessels 2 Ocean, coast-wise and Great Lakes All waters Tank vessels All...

Links between Iron Fertilization and Biological Pump Efficiency in the Bering Sea Over the Last 3.5 Myrs

NASA Astrophysics Data System (ADS)

Bartoli, G. L.; Studer, A. S.; Martinez Garcia, A.; Haug, G. H.

2011-12-01

The Bering Sea is one of the major sink of atmospheric CO2 today, due to the efficiency of its biological pump, despite a limitation by iron. Here we present records of iron fertilization by aeolian dust deposition (n-alkane concentration) and phytoplankton nutrient consumption (diatom-bound δ15N record) over the last 3.5 Myrs in the southwestern Bering Sea at Site U1341 drilled during IODP Expedition 323. During the Pliocene Epoch, when sea surface temperatures were 3-4°C warmer than today and sea-ice cover was reduced, the biological pump efficiency during glacial and interglacial stages was minimal, similar to Quaternary interglacials. Low iron deposition and weaker surface water stratification resulting in higher nutrient inputs contributed to reduce the biological pump efficiency until 1.5 Ma. After the intensification of glacial conditions in the Bering Sea and the increase in sea-ice cover and iron inputs, the biological pump efficiency progressively increased, reaching values similar to Quaternary glacials after the mid-Pleistocene transition.

Spatial variability of upper ocean POC export in the Bay of Bengal and the Indian Ocean determined using particle-reactive 234Th

NASA Astrophysics Data System (ADS)

Subha Anand, S.; Rengarajan, R.; Sarma, V. V. S. S.; Sudheer, A. K.; Bhushan, R.; Singh, S. K.

2017-05-01

The northern Indian Ocean is globally significant for its seasonally reversing winds, upwelled nutrients, high biological production, and expanding oxygen minimum zones. The region acts as sink and source for atmospheric CO2. However, the efficiency of the biological carbon pump to sequester atmospheric CO2 and export particulate organic carbon from the surface is not well known. To quantify the upper ocean carbon export flux and to estimate the efficiency of biological carbon pump in the Bay of Bengal and the Indian Ocean, seawater profiles of total 234Th were measured from surface to 300 m depth at 13 stations from 19.9°N to 25.3°S in a transect along 87°E, during spring intermonsoon period (March-April 2014). Results showed enhanced in situ primary production in the equatorial Indian Ocean and the central Bay of Bengal and varied from 13.2 to 173.8 mmol C m-2 d-1. POC export flux in this region varied from 0 to 7.7 mmol C m-2 d-1. Though high carbon export flux was found in the equatorial region, remineralization of organic carbon in the surface and subsurface waters considerably reduced organic carbon export in the Bay of Bengal. Annually recurring anticyclonic eddies enhanced organic carbon utilization and heterotrophy. Oxygen minimum zone developed due to stratification and poor ventilation was intensified by subsurface remineralization. 234Th-based carbon export fluxes were not comparable with empirical statistical model estimates based on primary production and temperature. Region-specific refinement of model parameters is required to accurately predict POC export fluxes.

Sensitivities of marine carbon fluxes to ocean change.

PubMed

Riebesell, Ulf; Körtzinger, Arne; Oschlies, Andreas

2009-12-08

Throughout Earth's history, the oceans have played a dominant role in the climate system through the storage and transport of heat and the exchange of water and climate-relevant gases with the atmosphere. The ocean's heat capacity is approximately 1,000 times larger than that of the atmosphere, its content of reactive carbon more than 60 times larger. Through a variety of physical, chemical, and biological processes, the ocean acts as a driver of climate variability on time scales ranging from seasonal to interannual to decadal to glacial-interglacial. The same processes will also be involved in future responses of the ocean to global change. Here we assess the responses of the seawater carbonate system and of the ocean's physical and biological carbon pumps to (i) ocean warming and the associated changes in vertical mixing and overturning circulation, and (ii) ocean acidification and carbonation. Our analysis underscores that many of these responses have the potential for significant feedback to the climate system. Because several of the underlying processes are interlinked and nonlinear, the sign and magnitude of the ocean's carbon cycle feedback to climate change is yet unknown. Understanding these processes and their sensitivities to global change will be crucial to our ability to project future climate change.

SUBMERGE! bringing the ocean closer to New York City

NASA Astrophysics Data System (ADS)

Rosengard, S.; Alexander, H.; Cramer, C.

2016-02-01

The annual SUBMERGE!-NYC marine science festival started in October 2014 as an effort to bring the ocean closer to the millions who live and work in the great estuary that is New York City. Organized by the Hudson River Park and the New York Hall of Science, the event brings together oceanography groups, musicians, and food vendors with distinct connections to the coastal ocean and the Hudson River estuary. Oceanography groups can either participate in the festival by giving a science talk during a specific time slot, or presenting science stations to teach concepts through a more interactive, exhibition-type format. Here, we discuss the experiences of graduate students from Woods Hole Oceanographic Institution who created a biological pump-themed science station for the first and second SUBMERGE! festivals (2014 and 2015). We will explore strategies for communicating different processes of the biological pump and its global significance for the oceans and climate. This festival-style setting also presents unique challenges in transferring knowledge, including how to evaluate successful transfer of knowledge. The festival is free and open to the public; the first year drew an audience of 4500, half of which were adults over 30 years old and a third of which were children under 11 years old. Therefore, SUBMERGE! provides an opportunity for graduate students to contribute to the ocean literacy of thousands of New Yorkers as well as a unique experience for graduate students to develop their skills in talking to the public.

Energy for biologic sulfate reduction in a hydrothermally formed ocean on Europa

NASA Astrophysics Data System (ADS)

Zolotov, Mikhail Y.; Shock, Everett L.

2003-04-01

Formation of a sulfate-bearing ocean on Jupiter's satellite Europa by quenched hydrothermal fluids provides a source of metabolic energy for low-temperature sulfate-reducing organisms that use dissolved H2 as an electron donor. Inhibition of thermodynamically favorable sulfate reduction in cooled hydrothermal fluids creates the potential for biologic reduction. Both high temperature and reduced conditions of ocean-forming hydrothermal solutions favor sulfate reduction in quenched fluids. The maximum amount of energy available to support autotrophic sulfate reduction is on the order of a few kilojoules per kilogram of water and is limited by the low abundances of either H2 or sulfate in ocean-forming fluids. Although this irreplaceable energy source might have supported early life on Europa, maintenance of biologic sulfate reduction throughout the ocean's history would require a supply of organic compounds from endogenic sources or from the satellite's surface.

The role of heterotrophic bacteria in iron-limited ocean ecosystems

NASA Astrophysics Data System (ADS)

Tortell, Philippe D.; Maldonado, Maria T.; Price, Nell M.

1996-09-01

IRON availability limits phytoplankton growth in large areas of the world's oceans1-3 and may influence the strength of the biological carbon pump4,5. Very little is known of the iron requirements of oceanic heterotrophic bacteria, which constitute up to 50% of the total particulate organic carbon in open ocean waters6,7 and are important in carbon cycling as remineralizers of dissolved organic matter and hence producers of CO2 (ref. 8). Here we report that oceanic bacteria contain more iron per biomass than phytoplankton. In the subarctic Pacific, they constitute a large fraction of biogenic iron and account for 20-45% of biological iron uptake. Bacterial iron quotas in the field are similar to those of iron-deficient laboratory cultures, which exhibit reduced elec-tron transport, slow growth, and low carbon growth efficiency. Heterotrophic bacteria therefore play a major role in the biogeo-chemical cycling of iron. In situ iron limitation of heterotrophic metabolism may have profound effects on carbon flux in the ocean.

Iron and sulfur in the pre-biologic ocean

NASA Technical Reports Server (NTRS)

Walker, J. C.; Brimblecombe, P.

1985-01-01

Tentative geochemical cycles for the pre-biologic Earth are developed by comparing the relative fluxes of oxygen, dissolved iron, and sulfide to the atmosphere and ocean. The flux of iron is found to exceed both the oxygen and the sulfide fluxes. Because of the insolubility of iron oxides and sulfides the implication is that dissolved iron was fairly abundant and that oxygen and sulfide were rare in the atmosphere and ocean. Sulfate, produced by the oxidation of volcanogenic sulfur gases, was the most abundant sulfur species in the ocean, but its concentration was low by modern standards because of the absence of the river-borne flux of dissolved sulfate produced by oxidative weathering of the continents. These findings are consistent with the geologic record of the isotopic composition of sedimentary sulfates and sulfides. Except in restricted environments, the sulfur metabolism of the earliest organisms probably involved oxidized sulfur species not sulfide.

The Importance of Subsurface Production for Carbon Export - Evidence from Past Oceans

NASA Astrophysics Data System (ADS)

Kemp, A. E. S.

2016-02-01

The maxim of the geological concept of uniformitarianism is "the present is the key to the past", but in the context of our temporally and spatially minimal observational record of modern ocean biogeochemical processes, ancient ocean sediments may provide critical evidence of the key species involved in carbon flux. Specifically, laminated marine sediments that preserve the seasonal flux cycle represent "palaeo-sediment traps" that vastly expand our knowledge of the operations of the marine biological carbon pump. Several key subsurface-dwelling diatom taxa, hitherto thought to be biogeochemically insignificant, are dominant components of ancient marine sediments. For example, the sapropels and equivalent horizons that have accumulated in the Mediterranean over the past 5 million years, contain abundant rhizosolenid and hemiaulid diatoms. These deposits contain the highest concentrations of organic carbon and there is extensive evidence that this was produced by subsurface production in a deep chlorophyll maximum. The highly stratified conditions that led to this subsurface production and carbon flux are in contrast to prevailing views that have held upwelling systems as those with the highest potential for export in the global ocean. Similarly, studies of ancient "greenhouse" periods such as the Cretaceous, with highly stratified oceans and which are potential analogues for future climate change, show evidence for extensive subsurface production. Together with emerging evidence from stratified regions of the modern ocean, such as the subtropical gyres, insights from these ancient oceans suggest that a reappraisal is required of current views on key phytoplankton producers and their role the operation of the marine biological carbon pump.

Biogeochemical Coupling between Ocean and Sea Ice

NASA Astrophysics Data System (ADS)

Wang, S.; Jeffery, N.; Maltrud, M. E.; Elliott, S.; Wolfe, J.

2016-12-01

Biogeochemical processes in ocean and sea ice are tightly coupled at high latitudes. Ongoing changes in Arctic and Antarctic sea ice domain likely influence the coupled system, not only through physical fields but also biogeochemical properties. Investigating the system and its changes requires representation of ocean and sea ice biogeochemical cycles, as well as their coupling in Earth System Models. Our work is based on ACME-HiLAT, a new offshoot of the Community Earth System Model (CESM), including a comprehensive representation of marine ecosystems in the form of the Biogeochemical Elemental Cycling Module (BEC). A full vertical column sea ice biogeochemical module has recently been incorporated into the sea ice component. We have further introduced code modifications to couple key growth-limiting nutrients (N, Si, Fe), dissolved and particulate organic matter, and phytoplankton classes that are important in polar regions between ocean and sea ice. The coupling of ocean and sea ice biology-chemistry will enable representation of key processes such as the release of important climate active constituents or seeding algae from melting sea ice into surface waters. Sensitivity tests suggest sea ice and ocean biogeochemical coupling influences phytoplankton competition, biological production, and the CO2 flux. Sea ice algal seeding plays an important role in determining phytoplankton composition of Arctic early spring blooms, since different groups show various responses to the seeding biomass. Iron coupling leads to increased phytoplankton biomass in the Southern Ocean, which also affects carbon uptake via the biological pump. The coupling of macronutrients and organic matter may have weaker influences on the marine ecosystem. Our developments will allow climate scientists to investigate the fully coupled responses of the sea ice-ocean BGC system to physical changes in polar climate.

Inference of physical/biological dynamics from synthetic ocean colour images

NASA Technical Reports Server (NTRS)

Eert, J.; Holloway, G.; Gower, J. F. R.; Denman, K.; Abbott, M.

1987-01-01

High resolution numerical experiments with well resolved eddies are performed including advection of a biologically active plankton field. Shelf wave propagation and bottom topographic features are included. The resulting synthetic ocean color fields are examined for sensitivity to the (known) underlying physical dynamics.

Millennial-scale changes in atmospheric CO2 levels linked to the Southern Ocean carbon isotope gradient and dust flux

NASA Astrophysics Data System (ADS)

Ziegler, Martin; Diz, Paula; Hall, Ian R.; Zahn, Rainer

2013-06-01

The rise in atmospheric CO2 concentrations observed at the end of glacial periods has, at least in part, been attributed to the upwelling of carbon-rich deep water in the Southern Ocean. The magnitude of outgassing of dissolved CO2, however, is influenced by the biological fixation of upwelled inorganic carbon and its transfer back to the deep sea as organic carbon. The efficiency of this biological pump is controlled by the extent of nutrient utilization, which can be stimulated by the delivery of iron by atmospheric dust particles. Changes in nutrient utilization should be reflected in the δ13C gradient between intermediate and deep waters. Here we use the δ13C values of intermediate- and bottom-dwelling foraminifera to reconstruct the carbon isotope gradient between thermocline and abyssal water in the subantarctic zone of the South Atlantic Ocean over the past 360,000 years. We find millennial-scale oscillations of the carbon isotope gradient that correspond to changes in dust flux and atmospheric CO2 concentrations as reported from Antarctic ice cores. We interpret this correlation as a relationship between the efficiency of the biological pump and fertilization by dust-borne iron. As the correlation is exponential, we suggest that the sensitivity of the biological pump to dust-borne iron fertilization may be increased when the background dust flux is low.

Inter-annual variability of transparent exopolymer particles in the Arctic Ocean reveals high sensitivity to ecosystem changes.

PubMed

Engel, Anja; Piontek, Judith; Metfies, Katja; Endres, Sonja; Sprong, Pim; Peeken, Ilka; Gäbler-Schwarz, Steffi; Nöthig, Eva-Maria

2017-06-23

Transparent exopolymer particles (TEP) are a class of marine gel particles and important links between surface ocean biology and atmospheric processes. Derived from marine microorganisms, these particles can facilitate the biological pumping of carbon dioxide to the deep sea, or act as cloud condensation and ice nucleation particles in the atmosphere. Yet, environmental controls on TEP abundance in the ocean are poorly known. Here, we investigated some of these controls during the first multiyear time-series on TEP abundance for the Fram Strait, the Atlantic gateway to the Central Arctic Ocean. Data collected at the Long-Term Ecological Research observatory HAUSGARTEN during 2009 to 2014 indicate a strong biological control with highest abundance co-occurring with the prymnesiophyte Phaeocystis pouchetii. Higher occurrence of P. pouchetii in the Arctic Ocean has previously been related to northward advection of warmer Atlantic waters, which is expected to increase in the future. Our study highlights the role of plankton key species in driving climate relevant processes; thus, changes in plankton distribution need to be accounted for when estimating the ocean's biogeochemical response to global change.

Feedback Interactions between Trace Metal Nutrients and Phytoplankton in the Ocean

PubMed Central

Sunda, William G.

2012-01-01

In addition to control by major nutrient elements (nitrogen, phosphorus, and silicon) the productivity and species composition of marine phytoplankton communities are also regulated by a number of trace metal nutrients (iron, zinc, cobalt, manganese, copper, and cadmium). Of these, iron is most limiting to phytoplankton growth and has the greatest effect on algal species diversity. It also plays an important role in limiting di-nitrogen (N2) fixation rates, and thus is important in controlling ocean inventories of fixed nitrogen. Because of these effects, iron is thought to play a key role in regulating biological cycles of carbon and nitrogen in the ocean, including the biological transfer of carbon to the deep sea, the so-called biological CO2 pump, which helps regulate atmospheric CO2 and CO2-linked global warming. Other trace metal nutrients (zinc, cobalt, copper, and manganese) have lesser effects on productivity; but may exert an important influence on the species composition of algal communities because of large differences in metal requirements among species. The interactions between trace metals and ocean plankton are reciprocal: not only do the metals control the plankton, but the plankton regulate the distributions, chemical speciation, and cycling of these metals through cellular uptake and recycling processes, downward flux of biogenic particles, biological release of organic chelators, and mediation of redox reactions. This two way interaction has influenced not only the biology and chemistry of the modern ocean, but has had a profound influence on biogeochemistry of the ocean and earth system as a whole, and on the evolution of marine and terrestrial biology over geologic history. PMID:22701115

Pleistocene atmospheric CO2 change linked to Southern Ocean nutrient utilization

NASA Astrophysics Data System (ADS)

Ziegler, M.; Diz, P.; Hall, I. R.; Zahn, R.

2011-12-01

Biological uptake of CO2 by the ocean and its subsequent storage in the abyss is intimately linked with the global carbon cycle and constitutes a significant climatic force1. The Southern Ocean is a particularly important region because its wind-driven upwelling regime brings CO2 laden abyssal waters to the surface that exchange CO2 with the atmosphere. The Subantarctic Zone (SAZ) is a CO2 sink and also drives global primary productivity as unutilized nutrients, advected with surface waters from the south, are exported via Subantarctic Mode Water (SAMW) as preformed nutrients to the low latitudes where they fuel the biological pump in upwelling areas. Recent model estimates suggest that up to 40 ppm of the total 100 ppm atmospheric pCO2 reduction during the last ice age were driven by increased nutrient utilization in the SAZ and associated feedbacks on the deep ocean alkalinity. Micro-nutrient fertilization by iron (Fe), contained in the airborne dust flux to the SAZ, is considered to be the prime factor that stimulated this elevated photosynthetic activity thus enhancing nutrient utilization. We present a millennial-scale record of the vertical stable carbon isotope gradient between subsurface and deep water (Δδ13C) in the SAZ spanning the past 350,000 years. The Δδ13C gradient, derived from planktonic and benthic foraminifera, reflects the efficiency of biological pump and is highly correlated (rxy = -0.67 with 95% confidence interval [0.63; 0.71], n=874) with the record of dust flux preserved in Antarctic ice cores6. This strongly suggests that nutrient utilization in the SAZ was dynamically coupled to dust-induced Fe fertilization across both glacial-interglacial and faster millennial timescales. In concert with ventilation changes of the deep Southern Ocean this drove ocean-atmosphere CO2 exchange and, ultimately, atmospheric pCO2 variability during the late Pleistocene.

Glacial-interglacial atmospheric CO2 change: a possible "standing volume" effect on deep-ocean carbon sequestration

NASA Astrophysics Data System (ADS)

Skinner, L. C.

2009-09-01

So far, the exploration of possible mechanisms for glacial atmospheric CO2 drawdown and marine carbon sequestration has tended to focus on dynamic or kinetic processes (i.e. variable mixing-, equilibration- or export rates). Here an attempt is made to underline instead the possible importance of changes in the standing volumes of intra-oceanic carbon reservoirs (i.e. different water-masses) in influencing the total marine carbon inventory. By way of illustration, a simple mechanism is proposed for enhancing the marine carbon inventory via an increase in the volume of relatively cold and carbon-enriched deep water, analogous to modern Lower Circumpolar Deep Water (LCDW), filling the ocean basins. A set of simple box-model experiments confirm the expectation that a deep sea dominated by an expanded LCDW-like watermass holds more CO2, without any pre-imposed changes in ocean overturning rate, biological export or ocean-atmosphere exchange. The magnitude of this "standing volume effect" (which operates by boosting the solubility- and biological pumps) might be as large as the contributions that have previously been attributed to carbonate compensation, terrestrial biosphere reduction or ocean fertilisation for example. By providing a means of not only enhancing but also driving changes in the efficiency of the biological- and solubility pumps, this standing volume mechanism may help to reduce the amount of glacial-interglacial CO2 change that remains to be explained by other mechanisms that are difficult to assess in the geological archive, such as reduced mass transport or mixing rates in particular. This in turn could help narrow the search for forcing conditions capable of pushing the global carbon cycle between glacial and interglacial modes.

Ocean glider observations of iceberg-enhanced biological production in the northwestern Weddell Sea

NASA Astrophysics Data System (ADS)

Biddle, Louise C.; Kaiser, Jan; Heywood, Karen J.; Thompson, Andrew F.; Jenkins, Adrian

2015-01-01

Icebergs affect local biological production around Antarctica. We used an ocean glider to observe the effects of a large iceberg that was advected by the Antarctic Slope Current along the continental slope in the northwestern Weddell Sea in early 2012. The high-resolution glider data reveal a pronounced effect of the iceberg on ocean properties, with oxygen concentrations of (13 ± 4) μmol kg-1 higher than levels in surrounding waters, which are most likely due to positive net community production. This response was confined to three areas of water in the direct vicinity of the iceberg track, each no larger than 2 km2. Our findings suggest that icebergs have an impact on Antarctic production presumably through local micronutrient injections, on a scale smaller than typical satellite observations of biological production in the Southern Ocean.

Cosmogenic 32P and 33P in the Atmosphere and Oligotrophic Ocean and Applications to the Study of Phosphorus Cycling

DTIC Science & Technology

1993-02-01

Ed.) , pp53-82. Poet, S.E., Moore H.E., and EA. Martell, 1972. Lead- 210 , bismuth 210 and polonium 210 in the atmosphere: accurate ratio measurement...in the ocean food web. The residence time of P in macrozooplankton was estimated to range from 40 to 60 days. A grazing rate of macrozooplankton of...cycles in the upper ocean remains a central issue for a com- 3 plete understanding of the biological pump and its effect on the deep ocean. There is

Global patterns of organic carbon export and sequestration in the ocean (Arne Richter Award for Outstanding Young Scientists)

NASA Astrophysics Data System (ADS)

Henson, S.; Sanders, R.; Madsen, E.; Le Moigne, F.; Quartly, G.

2012-04-01

A major term in the global carbon cycle is the ocean's biological carbon pump which is dominated by sinking of small organic particles from the surface ocean to its interior. Here we examine global patterns in particle export efficiency (PEeff), the proportion of primary production that is exported from the surface ocean, and transfer efficiency (Teff), the fraction of exported organic matter that reaches the deep ocean. This is achieved through extrapolating from in situ estimates of particulate organic carbon export to the global scale using satellite-derived data. Global scale estimates derived from satellite data show, in keeping with earlier studies, that PEeff is high at high latitudes and low at low latitudes, but that Teff is low at high latitudes and high at low latitudes. However, in contrast to the relationship observed for deep biomineral fluxes in previous studies, we find that Teff is strongly negatively correlated with opal export flux from the upper ocean, but uncorrelated with calcium carbonate export flux. We hypothesise that the underlying factor governing the spatial patterns observed in Teff is ecosystem function, specifically the degree of recycling occurring in the upper ocean, rather than the availability of calcium carbonate for ballasting. Finally, our estimate of global integrated carbon export is only 50% of previous estimates. The lack of consensus amongst different methodologies on the strength of the biological carbon pump emphasises that our knowledge of a major planetary carbon flux remains incomplete.

Quantification of the lithogenic carbon pump following a dust deposition event

NASA Astrophysics Data System (ADS)

Bressac, M.; Guieu, C.; Doxaran, D.; Bourrin, F.; Desboeufs, K.; Leblond, N.; Ridame, C.

2013-08-01

Lithogenic particles, such as desert dust, have been postulated to influence particulate organic carbon (POC) export to the deep ocean by acting as mineral ballasts. However, an accurate understanding and quantification of the POC-dust association that occurs within the upper ocean is required in order to affine the "ballast hypothesis". In the framework of the DUNE project, two artificial seedings were performed seven days apart within large mesocosms. A suite of optical and biogeochemical measurements were used to quantify surface POC export following simulated dust events within a low-nutrient low-chlorophyll ecosystem. The two successive seedings led to a 2.3-6.7 fold higher POC flux as compared to the POC flux observed in controlled mesocosms. A simple linear regression analysis revealed that the lithogenic fluxes explained more than 85% of the variance in POC fluxes. At the scale of a dust deposition event, we estimated that 42-50% of POC fluxes were strictly associated with lithogenic particles through an aggregation process. Lithogenic ballasting also likely impacted the remaining POC fraction which resulted from the fertilization effect. The observations support the "ballast hypothesis" and provide a quantitative estimation of the surface POC export abiotically triggered by dust deposition. In this work, we demonstrate that the strength of such a "lithogenic carbon pump" depends on the biogeochemical conditions of the water column at the time of deposition. Based on these observations, we suggest that this "lithogenic carbon pump" could represent a major component of the biological pump in oceanic areas subjected to intense atmospheric forcing.

OBIS-USA and Ocean Acidification: Chemical and Biological Observation Data, Integrated for Discovery and Applications

NASA Astrophysics Data System (ADS)

Fornwall, M.; Jewett, L.; Yates, K.; Goldstein, P.

2012-12-01

OBIS-USA (usgs.gov/obis-usa), a program of USGS Core Science, Analytics and Synthesis, is the US Regional node of the International Ocean Biogeographic Information System (iobis.org). OBIS data records observations of biological occurrences - identifiable species - at known time and coordinates. Within US research and operational communities, OBIS-USA serves an expanding range of applications by capturing details to accompany each observation: information to understand record quality and suitability for applications, details about observation circumstances such as sampling method and sampling conditions, and biological details such as sex, life stage, behavior and other characteristics. The NOAA Ocean Acidification Program and its associated data management effort (led by National Oceanographic Data Center) aim to enable users to locate, understand and use marine data from multiple sources and of multiple types to address questions related to ocean acidification and it impacts on marine ecosystems. By the nature of researching ocean acidification, data-driven applications require users to find and apply datasets that represent different disciplines as well as different researchers, organizations, agencies, funding models, data management practices and formats, and survey and observation methods. We refer to any collection(s) of data having diverse characteristics on these and other dimensions as "heterogeneous data". However, data management and Internet technologies enable the data itself and many of its diverse characteristics to be discoverable and understandable enough for users to build effective models, applications, and solutions. While it may not be simple to make heterogeneous data uniform or "seamless", current technologies enable at least the data characteristics to be sufficiently well-understood that users can consume data and accommodate its diverse characteristics in their process of generating outputs. Via this abstract and accompanying poster

Buffered versus non-buffered ocean carbon reservoir variations: Application to the sensitivity of atmospheric pCO2 to ocean circulation changes

NASA Astrophysics Data System (ADS)

d'Orgeville, M.; England, M. H.; Sijp, W. P.

2011-12-01

Changes in the ocean circulation on millenial timescales can impact the atmospheric CO2 concentration by two distinct mechanisms: either by modifying the non-buffered ocean carbon storage (through changes in the physical and biological oceanic pumps) or by directly varying the surface mean oceanic partial pressure of pCO2 (through changes in mean surface alkalinity, temperature or salinity). The equal importance of the two mechanisms is illustrated here by introducing a diagnostic buffered carbon budget on the results of simulations performed with an Earth System Climate Model. For all the circulation changes considered in this study (due to a freshening of the North Atlantic, or a change in the Southern Hemisphere Westerly winds), the sign of the atmospheric CO2 response is opposite to the sign of the non-buffered ocean carbon storage change, indicating a transfer of carbon between ocean and atmosphere reservoirs. However the concomitant changes in the buffered ocean carbon reservoir can either greatly enhance or almost inhibit the atmospheric response depending on its sign. This study also demonstrates the utility of the buffered carbon budget approach in diagnosing the transient response of the global carbon cycle to climatic variations.

Global Biogeochemical Fluxes Program for the Ocean Observatories Initiative: A Proposal. (Invited)

NASA Astrophysics Data System (ADS)

Ulmer, K. M.; Taylor, C.

2010-12-01

The overarching emphasis of the Global Biogeochemical Flux Ocean Observatories Initiative is to assess the role of oceanic carbon, both living and non-, in the Earth climate system. Modulation of atmospheric CO2 and its influence on global climate is a function of the quantitative capacity of the oceans to sequester organic carbon into deep waters. Critical to our understanding of the role of the oceans in the global cycling of carbon are the quantitative dynamics in both time and space of the fixation of CO2 into organic matter by surface ocean primary production and removal of this carbon to deep waters via the “biological pump”. To take the next major step forward in advancing our understanding of the oceanic biological pump, a global observation program is required that: (i) greatly improves constraints on estimates of global marine primary production (PP), a critical factor in understanding the global CO2 cycle and for developing accurate estimates of export production (EP); (ii) explores the spatiotemporal links between PP, EP and the biogeochemical processes that attenuate particulate organic carbon (POC) flux; (iii) characterizes microbial community structure and dynamics both in the surface and deep ocean; (iv) develops a comprehensive picture of the chemical and biological processes that take place from the surface ocean to the sea floor; (v) provides unique time-series samples for detailed laboratory-based chemical and biological characterization and tracer studies that will enable connections to be made between the operation of the biological pump at present and in the geologic past. The primary goal is to provide high quality biological and biogeochemical observational data for the modeling and prediction efforts of the global CO2 cycle research community. Crucial to the realization of the GBF-OOI is the development of reliable, long-term, time-series ocean observation platforms capable of precise

Advancing Ocean Science Through Coordination, Community Building, and Outreach

NASA Astrophysics Data System (ADS)

Benway, H. M.

2016-02-01

The US Ocean Carbon and Biogeochemistry (OCB) Program (www.us-ocb.org) is a dynamic network of scientists working across disciplines to understand the ocean's role in the global carbon cycle and how marine ecosystems and biogeochemical cycles are responding to environmental change. The OCB Project Office, which is based at the Woods Hole Oceanographic Institution (WHOI), serves as a central information hub for this network, bringing different scientific disciplines together and cultivating partnerships with complementary US and international programs to address high-priority research questions. The OCB Project Office plays multiple important support roles, such as hosting and co-sponsoring workshops, short courses, working groups, and synthesis activities on emerging research issues; engaging with relevant national and international science planning initiatives; and developing education and outreach activities and products with the goal of promoting ocean carbon science to broader audiences. Current scientific focus areas of OCB include ocean observations (shipboard, autonomous, satellite, etc.); changing ocean chemistry (acidification, expanding low-oxygen conditions, etc.); ocean carbon uptake and storage; estuarine and coastal carbon cycling; biological pump and associated biological and biogeochemical processes and carbon fluxes; and marine ecosystem response to environmental and evolutionary changes, including physiological and molecular-level responses of individual organisms, as well as shifts in community structure and function. OCB is a bottom-up organization that responds to the continually evolving priorities and needs of its network and engages marine scientists at all career stages. The scientific leadership of OCB includes a scientific steering committee and subcommittees on ocean time-series, ocean acidification, and ocean fertilization. This presentation will highlight recent OCB activities and products of interest to the ocean science community.

Subtropical Gyre Variability Observed by Ocean Color Satellites

NASA Technical Reports Server (NTRS)

McClain, Charles R.; Signorini, Sergio R.; Christian, James R.

2002-01-01

The subtropical gyres of the world are extensive, coherent regions that occupy about 40% of the surface of the earth. Once thought to be homogeneous and static habitats, there is increasing evidence that mid-latitude gyres exhibit substantial physical and biological variability on a variety of time scales. While biological productivity within these oligotrophic regions may be relatively small, their immense size makes their total contribution significant. Global distributions of dynamic height derived from satellite altimeter data, and chlorophyll concentration derived from satellite ocean color data, show that the dynamic center of the gyres, the region of maximum dynamic height where the thermocline is deepest, does not coincide with the region of minimum chlorophyll concentration. The physical and biological processes by which this distribution of ocean properties is maintained, and the spatial and temporal scales of variability associated with these processes, are analyzed using global surface chlorophyll-a concentrations, sea surface height, sea surface temperature and surface winds from operational satellite and meteorological sources, and hydrographic data from climatologies and individual surveys. Seasonal and interannual variability in the areal extent of the subtropical gyres are examined using 8 months (November 1996 - June 1997) of OCTS and nearly 5 years (September 1997 - June 02) of SeaWiFS ocean color data and are interpreted in the context of climate variability and measured changes in other ocean properties (i.e., wind forcing, surface currents, Ekman pumping, and vertical mixing). The North Pacific and North Atlantic gyres are observed to be shrinking over this period, while the South Pacific, South Atlantic, and South Indian Ocean gyres appear to be expanding.

Shallow Carbon Export from an Iron fertilised Plankton Bloom in the Southern Ocean

NASA Astrophysics Data System (ADS)

Sanders, R.; Pollard, R.; Morris, P.; Statham, P.; Moore, C. M. M.; Lucas, M.

2009-04-01

Some regions of the global ocean, notably the Southern Ocean, have high levels of macronutrients yet low levels of chlorophyll (the high nutrient, low chlorophyll or HNLC condition). Numerous artificial iron fertilization experiments conducted in the Southern Ocean have resulted in enhanced phytoplankton biomass and macronutrient drawdown. However the subsequent long-term biogeochemical consequences of such iron fertilization are unclear due in part to the limited size and duration of such experiments. An alternative way to assess the affect of iron over the Southern Ocean biological carbon pump is to observe the evolution of plankton production in regions of the Southern Ocean where shallow topography and Ocean currents interact to promote to release terrestrial iron into HNLC waters. During 2004-5 RRS Discovery conduced a complex programme of observations in such a region around the Crozet Islands in the SW Indian Ocean. The results of this programme, focussing on a quantitative estimate of carbon export per unit iron addition, will be presented.

Making United States Integrated Ocean Observing System (U.S. IOOS) inclusive of marine biological resources

USGS Publications Warehouse

Moustahfid, H.; Potemra, J.; Goldstein, P.; Mendelssohn, R.; Desrochers, A.

2011-01-01

An important Data Management and Communication (DMAC) goal is to enable a multi-disciplinary view of the ocean environment by facilitating discovery and integration of data from various sources, projects and scientific domains. United States Integrated Ocean Observing System (U.S. IOOS) DMAC functional requirements are based upon guidelines for standardized data access services, data formats, metadata, controlled vocabularies, and other conventions. So far, the data integration effort has focused on geophysical U.S. IOOS core variables such as temperature, salinity, ocean currents, etc. The IOOS Biological Observations Project is addressing the DMAC requirements that pertain to biological observations standards and interoperability applicable to U.S. IOOS and to various observing systems. Biological observations are highly heterogeneous and the variety of formats, logical structures, and sampling methods create significant challenges. Here we describe an informatics framework for biological observing data (e.g. species presence/absence and abundance data) that will expand information content and reconcile standards for the representation and integration of these biological observations for users to maximize the value of these observing data. We further propose that the approach described can be applied to other datasets generated in scientific observing surveys and will provide a vehicle for wider dissemination of biological observing data. We propose to employ data definition conventions that are well understood in U.S. IOOS and to combine these with ratified terminologies, policies and guidelines. ?? 2011 MTS.

Modeling long-term carbon residue in the ocean-atmosphere system following large CO2 emissions

NASA Astrophysics Data System (ADS)

Towles, N. J.; Olson, P.; Gnanadesikan, A.

2013-12-01

We use the LOSCAR carbon cycle model (Zeebe et al., 2009; Zeebe, 2012) to calculate the residual carbon in the ocean and atmosphere following large CO2 emissions. We consider the system response to CO2 emissions ranging from 100 to 20000 PgC, and emission durations from 100 yr to 100 kyr, subject to a wide range of system parameters such as the strengths of silicate weathering and the oceanic biological carbon pump. We define the carbon gain factor as the ratio of residual carbon in the ocean-atmosphere to the total emitted carbon. For moderate sized emissions shorter than about 50 kyr, we find that the carbon gain factor grows during the emission and peaks at about 1.7, primarily due to the erosion of carbonate marine sediments. In contrast, for longer emissions, the carbon gain factor peaks at a smaller value, and for very large emissions (more than 5000 PgC), the gain factor decreases with emission size due to carbonate sediment exhaustion. This gain factor is sensitive to model parameters such as low latitude efficiency of the biological pump. The timescale for removal of the residual carbon (reducing the carbon gain factor to zero) depends strongly on the assumed sensitivity of silicate weathering to atmospheric pCO2, and ranges from less than one million years to several million years.

Biological invasions on oceanic islands: Implications for island ecosystems and avifauna

Treesearch

Dean E. Pearson

2009-01-01

Biological invasions present a global threat to biodiversity, but oceanic islands are the systems hardest hit by invasions. Islands are generally depauperate in species richness, trophic complexity, and functional diversity relative to comparable mainland ecosystems. This situation results in low biotic resistance to invasion and many empty niches for invaders to...

Sequestering CO2 in the Ocean: Options and Consequences

NASA Astrophysics Data System (ADS)

Rau, G. H.; Caldeira, K.

2002-12-01

The likelihood of negative climate and environmental impacts associated with increasing atmospheric CO2 has prompted serious consideration of various CO2 mitigation strategies. Among these are methods of capturing and storing of CO2 in the ocean. Two approaches that have received the most attention in this regard have been i) ocean fertilization to enhanced biological uptake and fixation of CO2, and ii) the chemical/mechanical capture and injection of CO2 into the deep ocean. Both methods seek to enhance or speed up natural mechanisms of CO2 uptake and storage by the ocean, namely i) the biological CO2 "pump" or ii) the passive diffusion of CO2 into the surface ocean and subsequent mixing into the deep sea. However, as will be reviewed, concerns about the capacity and effectiveness of either strategy in long-term CO2 sequestration have been raised. Both methods are not without potentially significant environmental impacts, and the costs of CO2 capture and injection (option ii) are currently prohibitive. An alternate method of ocean CO2 sequestration would be to react and hydrate CO2 rich waste gases (e.g., power plant flue gas) with seawater and to subsequently neutralize the resulting carbonic acid with limestone to produce calcium and bicarbonate ions in solution. This approach would simply speed up the CO2 uptake and sequestration that naturally (but very slowly) occurs via global carbonate weathering. This would avoid much of the increased acidity associated with direct CO2 injection while obviating the need for costly CO2 separation and capture. The addition of the resulting bicarbonate- and carbonate-rich solution to the ocean would help to counter the decrease in pH and carbonate ion concentration, and hence loss of biological calcification that is presently occurring as anthropogenic CO2 invades the ocean from the atmosphere. However, as with any approach to CO2 mitigation, the costs, impacts, risks, and benefits of this method need to be better understood

Biological response to climate change in the Arctic Ocean: The view from the past

USGS Publications Warehouse

Cronin, Thomas M.; Cronin, Matthew A.

2017-01-01

The Arctic Ocean is undergoing rapid climatic changes including higher ocean temperatures, reduced sea ice, glacier and Greenland Ice Sheet melting, greater marine productivity, and altered carbon cycling. Until recently, the relationship between climate and Arctic biological systems was poorly known, but this has changed substantially as advances in paleoclimatology, micropaleontology, vertebrate paleontology, and molecular genetics show that Arctic ecosystem history reflects global and regional climatic changes over all timescales and climate states (103–107 years). Arctic climatic extremes include 25°C hyperthermal periods during the Paleocene-Eocene (56–46 million years ago, Ma), Quaternary glacial periods when thick ice shelves and sea ice cover rendered the Arctic Ocean nearly uninhabitable, seasonally sea-ice-free interglacials and abrupt climate reversals. Climate-driven biological impacts included large changes in species diversity, primary productivity, species’ geographic range shifts into and out of the Arctic, community restructuring, and possible hybridization, but evidence is not sufficient to determine whether or when major episodes of extinction occurred.

The role of nutricline depth in regulating the ocean carbon cycle

PubMed Central

Cermeño, Pedro; Dutkiewicz, Stephanie; Harris, Roger P.; Follows, Mick; Schofield, Oscar; Falkowski, Paul G.

2008-01-01

Carbon uptake by marine phytoplankton, and its export as organic matter to the ocean interior (i.e., the “biological pump”), lowers the partial pressure of carbon dioxide (pCO2) in the upper ocean and facilitates the diffusive drawdown of atmospheric CO2. Conversely, precipitation of calcium carbonate by marine planktonic calcifiers such as coccolithophorids increases pCO2 and promotes its outgassing (i.e., the “alkalinity pump”). Over the past ≈100 million years, these two carbon fluxes have been modulated by the relative abundance of diatoms and coccolithophores, resulting in biological feedback on atmospheric CO2 and Earth's climate; yet, the processes determining the relative distribution of these two phytoplankton taxa remain poorly understood. We analyzed phytoplankton community composition in the Atlantic Ocean and show that the distribution of diatoms and coccolithophorids is correlated with the nutricline depth, a proxy of nutrient supply to the upper mixed layer of the ocean. Using this analysis in conjunction with a coupled atmosphere–ocean intermediate complexity model, we predict a dramatic reduction in the nutrient supply to the euphotic layer in the coming century as a result of increased thermal stratification. Our findings indicate that, by altering phytoplankton community composition, this causal relationship may lead to a decreased efficiency of the biological pump in sequestering atmospheric CO2, implying a positive feedback in the climate system. These results provide a mechanistic basis for understanding the connection between upper ocean dynamics, the calcium carbonate-to-organic C production ratio and atmospheric pCO2 variations on time scales ranging from seasonal cycles to geological transitions. PMID:19075222

The Evolution of Deep Ocean Chemistry and Respired Carbon in the Eastern Equatorial Pacific Over the Last Deglaciation

NASA Astrophysics Data System (ADS)

de la Fuente, Maria; Calvo, Eva; Skinner, Luke; Pelejero, Carles; Evans, David; Müller, Wolfgang; Povea, Patricia; Cacho, Isabel

2017-12-01

It has been shown that the deep Eastern Equatorial Pacific (EEP) region was poorly ventilated during the Last Glacial Maximum (LGM) relative to Holocene values. This finding suggests a more efficient biological pump, which indirectly supports the idea of increased carbon storage in the deep ocean contributing to lower atmospheric CO2 during the last glacial. However, proxies related to respired carbon are needed in order to directly test this proposition. Here we present Cibicides wuellerstorfi B/Ca ratios from Ocean Drilling Program Site 1240 measured by laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) as a proxy for deep water carbonate saturation state (Δ[CO32-], and therefore [CO32-]), along with δ13C measurements. In addition, the U/Ca ratio in foraminiferal coatings has been analyzed as an indicator of oxygenation changes. Our results show lower [CO32-], δ13C, and [O2] values during the LGM, which would be consistent with higher respired carbon levels in the deep EEP driven, at least in part, by reduced deep water ventilation. However, the difference between LGM and Holocene [CO32-] observed at our site is relatively small, in accordance with other records from across the Pacific, suggesting that a "counteracting" mechanism, such as seafloor carbonate dissolution, also played a role. If so, this mechanism would have increased average ocean alkalinity, allowing even more atmospheric CO2 to be "sequestered" by the ocean. Therefore, the deep Pacific Ocean very likely stored a significant amount of atmospheric CO2 during the LGM, specifically due to a more efficient biological carbon pump and also an increase in average ocean alkalinity.

Experimental strategies to assess the biological ramifications of multiple drivers of global ocean change-A review.

PubMed

Boyd, Philip W; Collins, Sinead; Dupont, Sam; Fabricius, Katharina; Gattuso, Jean-Pierre; Havenhand, Jonathan; Hutchins, David A; Riebesell, Ulf; Rintoul, Max S; Vichi, Marcello; Biswas, Haimanti; Ciotti, Aurea; Gao, Kunshan; Gehlen, Marion; Hurd, Catriona L; Kurihara, Haruko; McGraw, Christina M; Navarro, Jorge M; Nilsson, Göran E; Passow, Uta; Pörtner, Hans-Otto

2018-06-01

Marine life is controlled by multiple physical and chemical drivers and by diverse ecological processes. Many of these oceanic properties are being altered by climate change and other anthropogenic pressures. Hence, identifying the influences of multifaceted ocean change, from local to global scales, is a complex task. To guide policy-making and make projections of the future of the marine biosphere, it is essential to understand biological responses at physiological, evolutionary and ecological levels. Here, we contrast and compare different approaches to multiple driver experiments that aim to elucidate biological responses to a complex matrix of ocean global change. We present the benefits and the challenges of each approach with a focus on marine research, and guidelines to navigate through these different categories to help identify strategies that might best address research questions in fundamental physiology, experimental evolutionary biology and community ecology. Our review reveals that the field of multiple driver research is being pulled in complementary directions: the need for reductionist approaches to obtain process-oriented, mechanistic understanding and a requirement to quantify responses to projected future scenarios of ocean change. We conclude the review with recommendations on how best to align different experimental approaches to contribute fundamental information needed for science-based policy formulation. © 2018 John Wiley & Sons Ltd.

Delineating environmental control of phytoplankton biomass and phenology in the Southern Ocean

NASA Astrophysics Data System (ADS)

Ardyna, Mathieu; Claustre, Hervé; Sallée, Jean-Baptiste; D'Ovidio, Francesco; Gentili, Bernard; van Dijken, Gert; D'Ortenzio, Fabrizio; Arrigo, Kevin R.

2017-05-01

The Southern Ocean (SO), an area highly sensitive to climate change, is currently experiencing rapid warming and freshening. Such drastic physical changes might significantly alter the SO's biological pump. For more accurate predictions of the possible evolution of this pump, a better understanding of the environmental factors controlling SO phytoplankton dynamics is needed. Here we present a satellite-based study deciphering the complex environmental control of phytoplankton biomass (PB) and phenology (PH; timing and magnitude of phytoplankton blooms) in the SO. We reveal that PH and PB are mostly organized in the SO at two scales: a large latitudinal scale and a regional scale. Latitudinally, a clear gradient in the timing of bloom occurrence appears tightly linked to the seasonal cycle in irradiance, with some exceptions in specific light-limited regimes (i.e., well-mixed areas). Superimposed on this latitudinal scale, zonal asymmetries, up to 3 orders of magnitude, in regional-scale PB are mainly driven by local advective and iron supply processes. These findings provide a global understanding of PB and PH in the SO, which is of fundamental interest for identifying and explaining ongoing changes as well as predicting future changes in the SO biological pump.

Bicarbonate uptake by Southern Ocean phytoplankton

NASA Astrophysics Data System (ADS)

Cassar, Nicolas; Laws, Edward A.; Bidigare, Robert R.; Popp, Brian N.

2004-06-01

Marine phytoplankton have the potential to significantly buffer future increases in atmospheric carbon dioxide levels. However, in order for CO2 fertilization to have an effect on carbon sequestration to the deep ocean, the increase in dissolved CO2 must stimulate primary productivity; that is, marine phototrophs must be CO2 limited [, 1993]. Estimation of the extent of bicarbonate (HCO3-) uptake in the oceans is therefore required to determine whether the anthropogenic carbon sources will enhance carbon flux to the deep ocean. Using short-term 14CO2-disequilibrium experiments during the Southern Ocean Iron Experiment (SOFeX), we show that HCO3- uptake by Southern Ocean phytoplankton is significant. Since the majority of dissolved inorganic carbon (DIC) in the ocean is in the form of bicarbonate, the biological pump may therefore be insensitive to anthropogenic CO2. Approximately half of the DIC uptake observed was attributable to direct HCO3- uptake, the other half being direct CO2 uptake mediated either by passive diffusion or active uptake mechanisms. The increase in growth rates and decrease in CO2 concentration associated with the iron fertilization did not trigger any noticeable changes in the mode of DIC acquisition, indicating that under most environmental conditions the carbon concentrating mechanism (CCM) is constitutive. A low-CO2 treatment induced an increase in uptake of CO2, which we attributed to increased extracellular carbonic anhydrase activity, at the expense of direct HCO3- transport across the plasmalemma. Isotopic disequilibrium experimental results are consistent with Southern Ocean carbon stable isotope fractionation data from this and other studies. Although iron fertilization has been shown to significantly enhance phytoplankton growth and may potentially increase carbon flux to the deep ocean, an important source of the inorganic carbon taken up by phytoplankton in this study was HCO3-, whose concentration is negligibly affected by the

Role of Marine Biology in Glacial-Interglacial CO2 Cycles

NASA Astrophysics Data System (ADS)

Kohfeld, Karen E.; Le Quéré, Corinne; Harrison, Sandy P.; Anderson, Robert F.

2005-04-01

It has been hypothesized that changes in the marine biological pump caused a major portion of the glacial reduction of atmospheric carbon dioxide by 80 to 100 parts per million through increased iron fertilization of marine plankton, increased ocean nutrient content or utilization, or shifts in dominant plankton types. We analyze sedimentary records of marine productivity at the peak and the middle of the last glacial cycle and show that neither changes in nutrient utilization in the Southern Ocean nor shifts in plankton dominance explain the CO2 drawdown. Iron fertilization and associated mechanisms can be responsible for no more than half the observed drawdown.

Biological research by optically pumped far infrared lasers

NASA Astrophysics Data System (ADS)

Zhengyu, Mi

1989-05-01

The FIR breeding for paddy rice, black bean and wheat, the chlorophyll mutation of paddy rice induced by optically pumped FIR laser, etc., are presented. The results of SDS electrophoresis analysis of soluble proteins of Drosophita melanrgaster irradiated by optically pumped FIR laser are described and discussed.

A review of selected pumping systems in nature and engineering--potential biomimetic concepts for improving displacement pumps and pulsation damping.

PubMed

Bach, D; Schmich, F; Masselter, T; Speck, T

2015-09-03

The active transport of fluids by pumps plays an essential role in engineering and biology. Due to increasing energy costs and environmental issues, topics like noise reduction, increase of efficiency and enhanced robustness are of high importance in the development of pumps in engineering. The study compares pumps in biology and engineering and assesses biomimetic potentials for improving man-made pumping systems. To this aim, examples of common challenges, applications and current biomimetic research for state-of-the art pumps are presented. The biomimetic research is helped by the similar configuration of many positive displacement pumping systems in biology and engineering. In contrast, the configuration and underlying pumping principles for fluid dynamic pumps (FDPs) differ to a greater extent in biology and engineering. However, progress has been made for positive displacement as well as for FDPs by developing biomimetic devices with artificial muscles and cilia that improve energetic efficiency and fail-safe operation or reduce noise. The circulatory system of vertebrates holds a high biomimetic potential for the damping of pressure pulsations, a common challenge in engineering. Damping of blood pressure pulsation results from a nonlinear viscoelastic behavior of the artery walls which represent a complex composite material. The transfer of the underlying functional principle could lead to an improvement of existing technical solutions and be used to develop novel biomimetic damping solutions. To enhance efficiency or thrust of man-made fluid transportation systems, research on jet propulsion in biology has shown that a pulsed jet can be tuned to either maximize thrust or efficiency. The underlying principle has already been transferred into biomimetic applications in open channel water systems. Overall there is a high potential to learn from nature in order to improve pumping systems for challenges like the reduction of pressure pulsations, increase of jet

Responses of ocean circulation and carbon cycle to changes in the position of the Southern Hemisphere westerlies at Last Glacial Maximum

PubMed Central

Völker, Christoph; Köhler, Peter

2013-01-01

We explore the impact of a latitudinal shift in the westerly wind belt over the Southern Ocean on the Atlantic meridional overturning circulation (AMOC) and on the carbon cycle for Last Glacial Maximum background conditions using a state-of-the-art ocean general circulation model. We find that a southward (northward) shift in the westerly winds leads to an intensification (weakening) of no more than 10% of the AMOC. This response of the ocean physics to shifting winds agrees with other studies starting from preindustrial background climate, but the responsible processes are different. In our setup changes in AMOC seemed to be more pulled by upwelling in the south than pushed by downwelling in the north, opposite to what previous studies with different background climate are suggesting. The net effects of the changes in ocean circulation lead to a rise in atmospheric pCO2 of less than 10 μatm for both northward and southward shift in the winds. For northward shifted winds the zone of upwelling of carbon- and nutrient-rich waters in the Southern Ocean is expanded, leading to more CO2outgassing to the atmosphere but also to an enhanced biological pump in the subpolar region. For southward shifted winds the upwelling region contracts around Antarctica, leading to less nutrient export northward and thus a weakening of the biological pump. These model results do not support the idea that shifts in the westerly wind belt play a dominant role in coupling atmospheric CO2 rise and Antarctic temperature during deglaciation suggested by the ice core data. PMID:26074663

Responses of ocean circulation and carbon cycle to changes in the position of the Southern Hemisphere westerlies at Last Glacial Maximum.

PubMed

Völker, Christoph; Köhler, Peter

2013-12-01

We explore the impact of a latitudinal shift in the westerly wind belt over the Southern Ocean on the Atlantic meridional overturning circulation (AMOC) and on the carbon cycle for Last Glacial Maximum background conditions using a state-of-the-art ocean general circulation model. We find that a southward (northward) shift in the westerly winds leads to an intensification (weakening) of no more than 10% of the AMOC. This response of the ocean physics to shifting winds agrees with other studies starting from preindustrial background climate, but the responsible processes are different. In our setup changes in AMOC seemed to be more pulled by upwelling in the south than pushed by downwelling in the north, opposite to what previous studies with different background climate are suggesting. The net effects of the changes in ocean circulation lead to a rise in atmospheric p CO 2 of less than 10 μatm for both northward and southward shift in the winds. For northward shifted winds the zone of upwelling of carbon- and nutrient-rich waters in the Southern Ocean is expanded, leading to more CO 2 outgassing to the atmosphere but also to an enhanced biological pump in the subpolar region. For southward shifted winds the upwelling region contracts around Antarctica, leading to less nutrient export northward and thus a weakening of the biological pump. These model results do not support the idea that shifts in the westerly wind belt play a dominant role in coupling atmospheric CO 2 rise and Antarctic temperature during deglaciation suggested by the ice core data.

Multi-pumping flow system for the determination of boron in eye drops, drinking water and ocean water.

PubMed

González, Pablo; Sixto, Alexandra; Knochen, Moisés

2017-05-01

A novel automated method for the determination of boron based on the use of pulsed flows was developed and applied to the determination of this element in samples of tap water, ocean water and eye drops. The method was implemented by means of a multi-pumping system consisting of three solenoid micropumps and a photometric detector and exploits the reaction of azomethine-H in the presence of boron. The system runs under control of an open-source microcontroller. The main operational parameters were optimized. Given the particular kinetics of the reaction, a stopped-flow period (1 or 5min) was included to allow for color development. The method presents linearity in the range 0.35-3.0mgL -1 , good precision (s r <3%), and detection and quantification limits of 0.10 and 0.35mgL -1 respectively. Samples of tap water or eye drops could be successfully analyzed employing a 1-minute stop time, providing a maximum sampling frequency of 32 samples h -1 . In order to overcome matrix effect caused by the high saline concentration, ocean water samples required stop times of 5min, providing a sampling frequency of 10 samples h -1 . Recoveries of 102% (eye drops), 94% (drinking water) and 93% (ocean water) were obtained. The method was considered accurate and fit for the purpose. Copyright © 2015 Elsevier B.V. All rights reserved.

Quantifying pCO2 in biological ocean acidification experiments: A comparison of four methods.

PubMed

Watson, Sue-Ann; Fabricius, Katharina E; Munday, Philip L

2017-01-01

Quantifying the amount of carbon dioxide (CO2) in seawater is an essential component of ocean acidification research; however, equipment for measuring CO2 directly can be costly and involve complex, bulky apparatus. Consequently, other parameters of the carbonate system, such as pH and total alkalinity (AT), are often measured and used to calculate the partial pressure of CO2 (pCO2) in seawater, especially in biological CO2-manipulation studies, including large ecological experiments and those conducted at field sites. Here we compare four methods of pCO2 determination that have been used in biological ocean acidification experiments: 1) Versatile INstrument for the Determination of Total inorganic carbon and titration Alkalinity (VINDTA) measurement of dissolved inorganic carbon (CT) and AT, 2) spectrophotometric measurement of pHT and AT, 3) electrode measurement of pHNBS and AT, and 4) the direct measurement of CO2 using a portable CO2 equilibrator with a non-dispersive infrared (NDIR) gas analyser. In this study, we found these four methods can produce very similar pCO2 estimates, and the three methods often suited to field-based application (spectrophotometric pHT, electrode pHNBS and CO2 equilibrator) produced estimated measurement uncertainties of 3.5-4.6% for pCO2. Importantly, we are not advocating the replacement of established methods to measure seawater carbonate chemistry, particularly for high-accuracy quantification of carbonate parameters in seawater such as open ocean chemistry, for real-time measures of ocean change, nor for the measurement of small changes in seawater pCO2. However, for biological CO2-manipulation experiments measuring differences of over 100 μatm pCO2 among treatments, we find the four methods described here can produce similar results with careful use.

Quantifying pCO2 in biological ocean acidification experiments: A comparison of four methods

PubMed Central

Fabricius, Katharina E.; Munday, Philip L.

2017-01-01

Quantifying the amount of carbon dioxide (CO2) in seawater is an essential component of ocean acidification research; however, equipment for measuring CO2 directly can be costly and involve complex, bulky apparatus. Consequently, other parameters of the carbonate system, such as pH and total alkalinity (AT), are often measured and used to calculate the partial pressure of CO2 (pCO2) in seawater, especially in biological CO2-manipulation studies, including large ecological experiments and those conducted at field sites. Here we compare four methods of pCO2 determination that have been used in biological ocean acidification experiments: 1) Versatile INstrument for the Determination of Total inorganic carbon and titration Alkalinity (VINDTA) measurement of dissolved inorganic carbon (CT) and AT, 2) spectrophotometric measurement of pHT and AT, 3) electrode measurement of pHNBS and AT, and 4) the direct measurement of CO2 using a portable CO2 equilibrator with a non-dispersive infrared (NDIR) gas analyser. In this study, we found these four methods can produce very similar pCO2 estimates, and the three methods often suited to field-based application (spectrophotometric pHT, electrode pHNBS and CO2 equilibrator) produced estimated measurement uncertainties of 3.5–4.6% for pCO2. Importantly, we are not advocating the replacement of established methods to measure seawater carbonate chemistry, particularly for high-accuracy quantification of carbonate parameters in seawater such as open ocean chemistry, for real-time measures of ocean change, nor for the measurement of small changes in seawater pCO2. However, for biological CO2-manipulation experiments measuring differences of over 100 μatm pCO2 among treatments, we find the four methods described here can produce similar results with careful use. PMID:28957378

Validity of in vitro tests on aqueous spray pumps as surrogates for nasal deposition, absorption, and biologic response.

PubMed

Suman, Julie D; Laube, Beth L; Dalby, Richard

2006-01-01

This research investigated the impact of the full range of in vitro spray characterization tests described in the FDA Draft Bioequivalence Guidance on nasal deposition pattern, pharmacokinetics, and biological response to nicotine administered by two aqueous nasal spray pumps in human volunteers. Nicotine was selected as a model drug (even though it is not locally acting) based on its ability to alter cardiac function and available plasma assay. Significant differences in pump performance-including mean volume diameters, spray angle, spray width, and ovality ratios-were observed between the two pumps. There were no significant differences in deposition pattern, or pharmacokinetic or pharmacodynamic response to the nasally administered nicotine. Although there were statistical differences in the in vitro tests between the two pumps, these differences did not result in significant alterations in the site of droplet deposition within the nose, the rate and extent of nicotine absorption, or the physiologic response it induced. These results suggest that current measures of in vitro performance, particularly spray angle and spray pattern (ovality), may not be clinically relevant. Additional research is needed to define what spray pump characteristics are likely to produce differences in deposition pattern and drug response.

Biogeochemical-Argo: achievements, challenges for the future and potential synergies with other components of ocean observation systems

NASA Astrophysics Data System (ADS)

Claustre, Hervé; Johnson, Ken

2017-04-01

The recently launched Biogeochemical-Argo (BGC-Argo) program aims at developing a global network of biogeochemical sensors on Argo profiling floats for acquiring long-term high-quality time-series of oceanic properties. BGC-Argo is in particular poised to address a number of challenges in ocean science (e.g. hypoxia, carbon uptake, ocean acidification, biological-carbon pump and phytoplankton communities), topics that are difficult, if not impossible, to address with our present observing assets. Presently six variables are considered as core BGC-Argo variables (O2, NO3, pH, Chla, suspended particles and downwelling irradiance). Historically, BGC-Argo has been initiated through small-scale "showcase" projects progressively scaling up into regional case studies essentially addressing key biological pump-related questions in specific regions (e.g. sub-tropical gyres, North Atlantic, Southern Ocean). Now BGC-Argo is transitioning towards a global and sustained observation system thanks to progressive international coordination of national contributions and to increasingly mature and efficient data management and distribution systems. In this presentation, we will highlight a variety of results derived from BGC-Argo observations and encompassing a wide range of topics related to ocean biogeochemistry. Challenges for the future and long-term sustainability of the system will be addressed in particular with respect to maintaining a high-quality and interoperable dataset over long-term. Part of this can be achieved through a tight interaction with programs (e.g. GOSHIP) and their historical databases, which should constitute a corner stone to assess data quality. Example on the interplay between BGC-Argo and GlodapV2 databases will be particularly exemplified in this context. Furthermore, we will illustrate the potential synergies between synoptically measured surface satellite-quantities and their vertically resolved (BGC-Argo) counterparts into the development of 3D

Viral attack exacerbates the susceptibility of a bloom-forming alga to ocean acidification.

PubMed

Chen, Shanwen; Gao, Kunshan; Beardall, John

2015-02-01

Both ocean acidification and viral infection bring about changes in marine phytoplankton physiological activities and community composition. However, little information is available on how the relationship between phytoplankton and viruses may be affected by ocean acidification and what impacts this might have on photosynthesis-driven marine biological CO2 pump. Here, we show that when the harmful bloom alga Phaeocystis globosa is infected with viruses under future ocean conditions, its photosynthetic performance further decreased and cells became more susceptible to stressful light levels, showing enhanced photoinhibition and reduced carbon fixation, up-regulation of mitochondrial respiration and decreased virus burst size. Our results indicate that ocean acidification exacerbates the impacts of viral attack on P. globosa, which implies that, while ocean acidification directly influences marine primary producers, it may also affect them indirectly by altering their relationship with viruses. Therefore, viruses as a biotic stressor need to be invoked when considering the overall impacts of climate change on marine productivity and carbon sequestration. © 2014 John Wiley & Sons Ltd.

Quantification of the lithogenic carbon pump following a simulated dust-deposition event in large mesocosms

NASA Astrophysics Data System (ADS)

Bressac, M.; Guieu, C.; Doxaran, D.; Bourrin, F.; Desboeufs, K.; Leblond, N.; Ridame, C.

2014-02-01

Lithogenic particles, such as desert dust, have been postulated to influence particulate organic carbon (POC) export to the deep ocean by acting as mineral ballasts. However, an accurate understanding and quantification of the POC-dust association that occurs within the upper ocean is required in order to refine the "ballast hypothesis". In the framework of the DUNE (a DUst experiment in a low-Nutrient, low-chlorophyll Ecosystem) project, two artificial seedings were performed seven days apart within large mesocosms. A suite of optical and biogeochemical measurements were used to quantify surface POC export following simulated dust events within a low-nutrient, low-chlorophyll ecosystem. The two successive seedings led to a 2.3-6.7-fold higher POC flux than the POC flux observed in controlled mesocosms. A simple linear regression analysis revealed that the lithogenic fluxes explained more than 85% of the variance in POC fluxes. On the scale of a dust-deposition event, we estimated that 42-50% of POC fluxes were strictly associated with lithogenic particles (through aggregation and most probably sorption processes). Lithogenic ballasting also likely impacted the remaining POC fraction which resulted from the fertilization effect. The observations support the "ballast hypothesis" and provide a quantitative estimation of the surface POC export abiotically triggered by dust deposition. In this work, we demonstrate that the strength of such a "lithogenic carbon pump" depends on the biogeochemical conditions of the water column at the time of deposition. Based on these observations, we suggest that this lithogenic carbon pump could represent a major component of the biological pump in oceanic areas subjected to intense atmospheric forcing.

Iron control on global productivity: an efficient inverse model of the ocean's coupled phosphate and iron cycles.

NASA Astrophysics Data System (ADS)

Pasquier, B.; Holzer, M.; Frants, M.

2016-02-01

We construct a data-constrained mechanistic inverse model of the ocean's coupled phosphorus and iron cycles. The nutrient cycling is embedded in a data-assimilated steady global circulation. Biological nutrient uptake is parameterized in terms of nutrient, light, and temperature limitations on growth for two classes of phytoplankton that are not transported explicitly. A matrix formulation of the discretized nutrient tracer equations allows for efficient numerical solutions, which facilitates the objective optimization of the key biogeochemical parameters. The optimization minimizes the misfit between the modelled and observed nutrient fields of the current climate. We systematically assess the nonlinear response of the biological pump to changes in the aeolian iron supply for a variety of scenarios. Specifically, Green-function techniques are employed to quantify in detail the pathways and timescales with which those perturbations are propagated throughout the world oceans, determining the global teleconnections that mediate the response of the global ocean ecosystem. We confirm previous findings from idealized studies that increased iron fertilization decreases biological production in the subtropical gyres and we quantify the counterintuitive and asymmetric response of global productivity to increases and decreases in the aeolian iron supply.

Iron defecation by sperm whales stimulates carbon export in the Southern Ocean

PubMed Central

Lavery, Trish J.; Roudnew, Ben; Gill, Peter; Seymour, Justin; Seuront, Laurent; Johnson, Genevieve; Mitchell, James G.; Smetacek, Victor

2010-01-01

The iron-limited Southern Ocean plays an important role in regulating atmospheric CO2 levels. Marine mammal respiration has been proposed to decrease the efficiency of the Southern Ocean biological pump by returning photosynthetically fixed carbon to the atmosphere. Here, we show that by consuming prey at depth and defecating iron-rich liquid faeces into the photic zone, sperm whales (Physeter macrocephalus) instead stimulate new primary production and carbon export to the deep ocean. We estimate that Southern Ocean sperm whales defecate 50 tonnes of iron into the photic zone each year. Molar ratios of Cexport ∶Feadded determined during natural ocean fertilization events are used to estimate the amount of carbon exported to the deep ocean in response to the iron defecated by sperm whales. We find that Southern Ocean sperm whales stimulate the export of 4 × 105 tonnes of carbon per year to the deep ocean and respire only 2 × 105 tonnes of carbon per year. By enhancing new primary production, the populations of 12 000 sperm whales in the Southern Ocean act as a carbon sink, removing 2 × 105 tonnes more carbon from the atmosphere than they add during respiration. The ability of the Southern Ocean to act as a carbon sink may have been diminished by large-scale removal of sperm whales during industrial whaling. PMID:20554546

The role of diatom resting spores in pelagic-benthic coupling in the Southern Ocean

NASA Astrophysics Data System (ADS)

Rembauville, Mathieu; Blain, Stéphane; Manno, Clara; Tarling, Geraint; Thompson, Anu; Wolff, George; Salter, Ian

2018-05-01

Natural iron fertilization downstream of Southern Ocean island plateaus supports large phytoplankton blooms and promotes carbon export from the mixed layer. In addition to sequestering atmospheric CO2, the biological carbon pump also supplies organic matter (OM) to deep-ocean ecosystems. Although the total flux of OM arriving at the seafloor sets the energy input to the system, the chemical nature of OM is also of significance. However, a quantitative framework linking ecological flux vectors to OM composition is currently lacking. In the present study we report the lipid composition of export fluxes collected by five moored sediment traps deployed in contrasting productivity regimes of Southern Ocean island systems (Kerguelen, Crozet and South Georgia) and compile them with quantitative data on diatom and faecal pellet fluxes. At the three naturally iron-fertilized sites, the relative contribution of labile lipids (mono- and polyunsaturated fatty acids, unsaturated fatty alcohols) is 2-4 times higher than at low productivity sites. There is a strong attenuation of labile components as a function of depth, irrespective of productivity. The three island systems also display regional characteristics in lipid export. An enrichment of zooplankton dietary sterols, such as C27Δ5, at South Georgia is consistent with high zooplankton and krill biomass in the region and the importance of faecal pellets to particulate organic carbon (POC) flux. There is a strong association of diatom resting spore fluxes that dominate productive flux regimes with energy-rich unsaturated fatty acids. At the Kerguelen Plateau we provide a statistical framework to link seasonal variation in ecological flux vectors and lipid composition over a complete annual cycle. Our analyses demonstrate that ecological processes in the upper ocean, e.g. resting spore formation and grazing, not only impact the magnitude and stoichiometry of the Southern Ocean biological pump, but also regulate the

Rising atmospheric CO2 leads to large impact of biology on Southern Ocean CO2 uptake via changes of the Revelle factor

PubMed Central

Hauck, J; Völker, C

2015-01-01

The Southern Ocean is a key region for global carbon uptake and is characterized by a strong seasonality with the annual CO2 uptake being mediated by biological carbon drawdown in summer. Here we show that the contribution of biology to CO2 uptake will become even more important until 2100. This is the case even if biological production remains unaltered and can be explained by the decreasing buffer capacity of the ocean as its carbon content increases. The same amount of biological carbon drawdown leads to a more than twice as large reduction in CO2(aq) concentration and hence to a larger CO2 gradient between ocean and atmosphere that drives the gas exchange. While the winter uptake south of 44°S changes little, the summer uptake increases largely and is responsible for the annual mean response. The combination of decreasing buffer capacity and strong seasonality of biological carbon drawdown introduces a strong and increasing seasonality in the anthropogenic carbon uptake. Key Points Decrease of buffer capacity leads to stronger summer CO2 uptake in the future Biology will contribute more to future CO2 uptake in Southern Ocean Seasonality affects anthropogenic carbon uptake strongly PMID:26074650

Late Cretaceous seasonal ocean variability from the Arctic.

PubMed

Davies, Andrew; Kemp, Alan E S; Pike, Jennifer

2009-07-09

The modern Arctic Ocean is regarded as a barometer of global change and amplifier of global warming and therefore records of past Arctic change are critical for palaeoclimate reconstruction. Little is known of the state of the Arctic Ocean in the greenhouse period of the Late Cretaceous epoch (65-99 million years ago), yet records from such times may yield important clues to Arctic Ocean behaviour in near-future warmer climates. Here we present a seasonally resolved Cretaceous sedimentary record from the Alpha ridge of the Arctic Ocean. This palaeo-sediment trap provides new insight into the workings of the Cretaceous marine biological carbon pump. Seasonal primary production was dominated by diatom algae but was not related to upwelling as was previously hypothesized. Rather, production occurred within a stratified water column, involving specially adapted species in blooms resembling those of the modern North Pacific subtropical gyre, or those indicated for the Mediterranean sapropels. With increased CO(2) levels and warming currently driving increased stratification in the global ocean, this style of production that is adapted to stratification may become more widespread. Our evidence for seasonal diatom production and flux testify to an ice-free summer, but thin accumulations of terrigenous sediment within the diatom ooze are consistent with the presence of intermittent sea ice in the winter, supporting a wide body of evidence for low temperatures in the Late Cretaceous Arctic Ocean, rather than recent suggestions of a 15 degrees C mean annual temperature at this time.

Radiocarbon constraints on the glacial ocean circulation and its impact on atmospheric CO2

NASA Astrophysics Data System (ADS)

Skinner, L. C.; Primeau, F.; Freeman, E.; de La Fuente, M.; Goodwin, P. A.; Gottschalk, J.; Huang, E.; McCave, I. N.; Noble, T. L.; Scrivner, A. E.

2017-07-01

While the ocean's large-scale overturning circulation is thought to have been significantly different under the climatic conditions of the Last Glacial Maximum (LGM), the exact nature of the glacial circulation and its implications for global carbon cycling continue to be debated. Here we use a global array of ocean-atmosphere radiocarbon disequilibrium estimates to demonstrate a ~689+/-53 14C-yr increase in the average residence time of carbon in the deep ocean at the LGM. A predominantly southern-sourced abyssal overturning limb that was more isolated from its shallower northern counterparts is interpreted to have extended from the Southern Ocean, producing a widespread radiocarbon age maximum at mid-depths and depriving the deep ocean of a fast escape route for accumulating respired carbon. While the exact magnitude of the resulting carbon cycle impacts remains to be confirmed, the radiocarbon data suggest an increase in the efficiency of the biological carbon pump that could have accounted for as much as half of the glacial-interglacial CO2 change.

Oceanic biogeochemical controls on global dynamics of persistent organic pollutants.

PubMed

Dachs, Jordi; Lohmann, Rainer; Ockenden, Wendy A; Méjanelle, Laurence; Eisenreich, Steven J; Jones, Kevin C

2002-10-15

Understanding and quantifying the global dynamics and sinks of persistent organic pollutants (POPs) is important to assess their environmental impact and fate. Air-surface exchange processes, where temperature plays a central role in controlling volatilization and deposition, are of key importance in controlling global POP dynamics. The present study is an assessment of the role of oceanic biogeochemical processes, notably phytoplankton uptake and vertical fluxes of particles, on the global dynamics of POPs. Field measurements of atmospheric polychlorinated biphenyls (PCBs), polychlorinated dibenzodioxins (PCDDs), and furans (PCDFs) are combined with remote sensing estimations of oceanic temperature, wind speed, and chlorophyll, to model the interactions between air-water exchange, phytoplankton uptake, and export of organic matter and POPs out of the mixed surface ocean layer. Deposition is enhanced in the mid-high latitudes and is driven by sinking marine particulate matter, rather than by a cold condensation effect. However, the relative contribution of the biological pump is a function of the physical-chemical properties of POPs. It is concluded that oceanic biogeochemical processes play a critical role in controlling the global dynamics and the ultimate sink of POPs.

Biological responses of sharks to ocean acidification

PubMed Central

Rummer, Jodie L.; Munday, Philip L.

2017-01-01

Sharks play a key role in the structure of marine food webs, but are facing major threats due to overfishing and habitat degradation. Although sharks are also assumed to be at relatively high risk from climate change due to a low intrinsic rate of population growth and slow rates of evolution, ocean acidification (OA) has not, until recently, been considered a direct threat. New studies have been evaluating the potential effects of end-of-century elevated CO2 levels on sharks and their relatives' early development, physiology and behaviour. Here, we review those findings and use a meta-analysis approach to quantify the overall direction and magnitude of biological responses to OA in the species of sharks that have been investigated to date. While embryo survival and development time are mostly unaffected by elevated CO2, there are clear effects on body condition, growth, aerobic potential and behaviour (e.g. lateralization, hunting and prey detection). Furthermore, studies to date suggest that the effects of OA could be as substantial as those due to warming in some species. A major limitation is that all past studies have involved relatively sedentary, benthic sharks that are capable of buccal ventilation—no studies have investigated pelagic sharks that depend on ram ventilation. Future research should focus on species with different life strategies (e.g. pelagic, ram ventilators), climate zones (e.g. polar regions), habitats (e.g. open ocean), and distinct phases of ontogeny in order to fully predict how OA and climate change will impact higher-order predators and therefore marine ecosystem dynamics. PMID:28356408

Teaching the Fundamentals of Biological Research with Primary Literature: Learning from the Discovery of the Gastric Proton Pump

ERIC Educational Resources Information Center

Zhu, Lixin

2011-01-01

For the purpose of teaching collegians the fundamentals of biological research, literature explaining the discovery of the gastric proton pump was presented in a 50-min lecture. The presentation included detailed information pertaining to the discovery process. This study was chosen because it demonstrates the importance of having a broad range of…

Carbon Sequestration through Sustainably Sourced Algal Fertilizer: Deep Ocean Water.

NASA Astrophysics Data System (ADS)

Sherman, M. T.

2014-12-01

Drawing down carbon from the atmosphere happens in the oceans when marine plants are growing due to the use of carbon dioxide for biological processes and by raising the pH of the water. Macro- and microscopic marine photosynthesizers are limited in their growth by the availability of light and nutrients (nitrogen, phosphorous, iron, etc.) Deep ocean water (DOW), oceanic water from bellow about 1000m, is a natural medium for marine algae, which contains all (except in rare circumstances) necessary components for algal growth and represents over 90% of the volume of the ocean. The introduction of DOW to a tropical or summer sea can increase chlorophyll from near zero to 60 mg per M3 or more. The form of the utilization infrastructure for DOW can roughly be divided into two effective types; the unconstrained release and the open pond system. Unconstrained release has the advantage of having relatively low infrastructure investment and is available to any area of the ocean. The open pond system has high infrastructure costs but enables intensive use of DOW for harvesting macro- and microalgae and sustainable mariculture. It also enables greater concomitant production of DOW's other potential products such as electricity or potable water. However, unlike an unconstrained release the open pond system can capture much of the biomaterial from the water and limits the impact to the surrounding ecosystem. The Tidal Irrigation and Electrical System (TIESystem), is an open pond that is to be constructed on a continental shelf. It harnesses the tidal flux to pump DOW into the pond on the rising tide and then uses the falling tide to pump biologically rich material out of the pond. This biomaterial represents fixed CO2 and can be used for biofuel or fertilizers. The TIESystem benefits from an economy of scale that increases at a rate that is roughly equal to the relationship of the circumference of a circle (the barrier that creates the open pond) to the area of the pond

Marine Biology Activities. Ocean Related Curriculum Activities.

ERIC Educational Resources Information Center

Pauls, John

The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

Ocean Prospects: A High School Teacher's Guide to Ocean-Related Topics.

ERIC Educational Resources Information Center

Plummer, C. M.

Provided in this guide are resources for these 11 topics: the physical/geological ocean; the chemical/biological ocean; the ocean's coasts; fishing and aquaculture; tourism, recreation, and development; mining and drilling; research and exploration; maritime and military; ocean technology; pollution; and resource management. These resources…

Biological responses of sharks to ocean acidification.

PubMed

Rosa, Rui; Rummer, Jodie L; Munday, Philip L

2017-03-01

Sharks play a key role in the structure of marine food webs, but are facing major threats due to overfishing and habitat degradation. Although sharks are also assumed to be at relatively high risk from climate change due to a low intrinsic rate of population growth and slow rates of evolution, ocean acidification (OA) has not, until recently, been considered a direct threat. New studies have been evaluating the potential effects of end-of-century elevated CO 2 levels on sharks and their relatives' early development, physiology and behaviour. Here, we review those findings and use a meta-analysis approach to quantify the overall direction and magnitude of biological responses to OA in the species of sharks that have been investigated to date. While embryo survival and development time are mostly unaffected by elevated CO 2 , there are clear effects on body condition, growth, aerobic potential and behaviour (e.g. lateralization, hunting and prey detection). Furthermore, studies to date suggest that the effects of OA could be as substantial as those due to warming in some species. A major limitation is that all past studies have involved relatively sedentary, benthic sharks that are capable of buccal ventilation-no studies have investigated pelagic sharks that depend on ram ventilation. Future research should focus on species with different life strategies (e.g. pelagic, ram ventilators), climate zones (e.g. polar regions), habitats (e.g. open ocean), and distinct phases of ontogeny in order to fully predict how OA and climate change will impact higher-order predators and therefore marine ecosystem dynamics. © 2017 The Author(s).

Are Salps A Silver Bullet Against Global Warming And Ocean Acidification?

NASA Astrophysics Data System (ADS)

Kithil, P. W.

2006-12-01

Oceanic uptake of 25 billion tons CO2 annually introduced into the atmosphere from carbon fuels must be mitigated to prevent further widespread changes in ocean biochemistry and potentially severe anthropogenic climate change. Larry Madin of Woods Hole Oceanographic Institute and his colleagues have measured the carbon sequestration in the excretia produced by dense swarms of Salps of up to 4,000 tons per day over a 100,000 km2 ocean region, equivalent to over 14 thousand tons of CO2 per day. This poses several questions: 1. Given the ocean surface of 372 million km2, does the Madin report imply a potential removal of 20 billion tons of CO2 per year 80% of emissions? 2. What might be the natural limitations on widespread propagation of Salps, and how would these effect the carbon sequestration actually achieved? 3. What mechanism could encourage the propagation of Salps throughout the oceans? Since Salps feast on phytoplankton which require sunlight and sufficient nutrients, we must first reduce the available ocean by perhaps 60% as a seasonal limit on phytoplankton growth and allow 60% further limit for poor nutrient availability and assuming some ocean regions are an unfavorable environment for Salps. Combined, the net ocean area over which Salps could sequester carbon is thus 36%, or 134 million km2. Assuming Madin's values for carbon sequestration are achievable over this ocean region, about 7.2 billion tons of CO2 could be sequestered annually, equal to 29% of mankind's current fossil-fuel CO2 output. This converts to a carbon equivalent of 1.96 billion tons per year. The mechanism we propose to encourage widespread propagation of Salps is forced upwelling using Atmocean's arrays of wave-driven deep ocean pumps to bring up large volumes of cold, nutrient-rich deep ocean to enhance the ocean's primary production, absorbing CO2 and producing oxygen. The pump simply comprises a buoy, flexible tube, cylinder with valve, cable to connect the buoy and cylinder, and

Scales and scaling in turbulent ocean sciences; physics-biology coupling

NASA Astrophysics Data System (ADS)

Schmitt, Francois

2015-04-01

Geophysical fields possess huge fluctuations over many spatial and temporal scales. In the ocean, such property at smaller scales is closely linked to marine turbulence. The velocity field is varying from large scales to the Kolmogorov scale (mm) and scalar fields from large scales to the Batchelor scale, which is often much smaller. As a consequence, it is not always simple to determine at which scale a process should be considered. The scale question is hence fundamental in marine sciences, especially when dealing with physics-biology coupling. For example, marine dynamical models have typically a grid size of hundred meters or more, which is more than 105 times larger than the smallest turbulence scales (Kolmogorov scale). Such scale is fine for the dynamics of a whale (around 100 m) but for a fish larvae (1 cm) or a copepod (1 mm) a description at smaller scales is needed, due to the nonlinear nature of turbulence. The same is verified also for biogeochemical fields such as passive and actives tracers (oxygen, fluorescence, nutrients, pH, turbidity, temperature, salinity...) In this framework, we will discuss the scale problem in turbulence modeling in the ocean, and the relation of Kolmogorov's and Batchelor's scales of turbulence in the ocean, with the size of marine animals. We will also consider scaling laws for organism-particle Reynolds numbers (from whales to bacteria), and possible scaling laws for organism's accelerations.

Carbonate counter pump stimulated by natural iron fertilization in the Polar Frontal Zone

NASA Astrophysics Data System (ADS)

Salter, Ian; Schiebel, Ralf; Ziveri, Patrizia; Movellan, Aurore; Lampitt, Richard; Wolff, George A.

2014-12-01

The production of organic carbon in the ocean's surface and its subsequent downward export transfers carbon dioxide to the deep ocean. This CO2 drawdown is countered by the biological precipitation of carbonate, followed by sinking of particulate inorganic carbon, which is a source of carbon dioxide to the surface ocean, and hence the atmosphere over 100-1,000 year timescales. The net transfer of CO2 to the deep ocean is therefore dependent on the relative amount of organic and inorganic carbon in sinking particles. In the Southern Ocean, iron fertilization has been shown to increase the export of organic carbon, but it is unclear to what degree this effect is compensated by the export of inorganic carbon. Here we assess the composition of sinking particles collected from sediment traps located in the Polar Frontal Zone of the Southern Ocean. We find that in high-nutrient, low-chlorophyll regions that are characterized by naturally high iron concentrations, fluxes of both organic and inorganic carbon are higher than in regions with no iron fertilization. However, the excess flux of inorganic carbon is greater than that of organic carbon. We estimate that the production and flux of carbonate in naturally iron-fertilized waters reduces the overall amount of CO2 transferred to the deep ocean by 6-32%, compared to 1-4% at the non-fertilized site. We suggest that an increased export of organic carbon, stimulated by iron availability in the glacial sub-Antarctic oceans, may have been accompanied by a strengthened carbonate counter pump.

Mechanical Extraction of Power From Ocean Currents and Tides

NASA Technical Reports Server (NTRS)

Jones, Jack; Chao, Yi

2010-01-01

A proposed scheme for generating electric power from rivers and from ocean currents, tides, and waves is intended to offer economic and environmental advantages over prior such schemes, some of which are at various stages of implementation, others of which have not yet advanced beyond the concept stage. This scheme would be less environmentally objectionable than are prior schemes that involve the use of dams to block rivers and tidal flows. This scheme would also not entail the high maintenance costs of other proposed schemes that call for submerged electric generators and cables, which would be subject to degradation by marine growth and corrosion. A basic power-generation system according to the scheme now proposed would not include any submerged electrical equipment. The submerged portion of the system would include an all-mechanical turbine/pump unit that would superficially resemble a large land-based wind turbine (see figure). The turbine axis would turn slowly as it captured energy from the local river flow, ocean current, tidal flow, or flow from an ocean-wave device. The turbine axis would drive a pump through a gearbox to generate an enclosed flow of water, hydraulic fluid, or other suitable fluid at a relatively high pressure [typically approx.500 psi (approx.3.4 MPa)]. The pressurized fluid could be piped to an onshore or offshore facility, above the ocean surface, where it would be used to drive a turbine that, in turn, would drive an electric generator. The fluid could be recirculated between the submerged unit and the power-generation facility in a closed flow system; alternatively, if the fluid were seawater, it could be taken in from the ocean at the submerged turbine/pump unit and discharged back into the ocean from the power-generation facility. Another alternative would be to use the pressurized flow to charge an elevated reservoir or other pumped-storage facility, from whence fluid could later be released to drive a turbine/generator unit at a

Substantial energy input to the mesopelagic ecosystem from the seasonal mixed-layer pump

PubMed Central

Dall’Olmo, Giorgio; Dingle, James; Polimene, Luca; Brewin, Robert J.W.; Claustre, Hervé

2016-01-01

The “mesopelagic” is the region of the ocean between about 100 and 1000 m that harbours one of the largest ecosystems and fish stocks on the planet1,2. This vastly unexplored ecosystem is believed to be mostly sustained by chemical energy, in the form of fast-sinking particulate organic carbon, supplied by the biological carbon pump3. Yet, this supply appears insufficient to match mesopelagic metabolic demands4–6. The mixed-layer pump is a physically-driven biogeochemical process7–11 that could further contribute to meet these energetic requirements. However, little is known about the magnitude and spatial distribution of this process at the global scale. Here we show that the mixed-layer pump supplies an important seasonal flux of organic carbon to the mesopelagic. By combining mixed-layer depths from Argo floats with satellite retrievals of particulate organic carbon, we estimate that this pump exports a global flux of about 0.3 Pg C yr−1 (range 0.1 – 0.5 Pg C yr−1). In high-latitude regions where mixed-layers are deep, this flux is on average 23%, but can be greater than 100% of the carbon supplied by fast sinking particles. Our results imply that a relatively large flux of organic carbon is missing from current energy budgets of the mesopelagic. PMID:27857779

Meta-analysis reveals complex marine biological responses to the interactive effects of ocean acidification and warming

PubMed Central

Harvey, Ben P; Gwynn-Jones, Dylan; Moore, Pippa J

2013-01-01

Ocean acidification and warming are considered two of the greatest threats to marine biodiversity, yet the combined effect of these stressors on marine organisms remains largely unclear. Using a meta-analytical approach, we assessed the biological responses of marine organisms to the effects of ocean acidification and warming in isolation and combination. As expected biological responses varied across taxonomic groups, life-history stages, and trophic levels, but importantly, combining stressors generally exhibited a stronger biological (either positive or negative) effect. Using a subset of orthogonal studies, we show that four of five of the biological responses measured (calcification, photosynthesis, reproduction, and survival, but not growth) interacted synergistically when warming and acidification were combined. The observed synergisms between interacting stressors suggest that care must be made in making inferences from single-stressor studies. Our findings clearly have implications for the development of adaptive management strategies particularly given that the frequency of stressors interacting in marine systems will be likely to intensify in the future. There is now an urgent need to move toward more robust, holistic, and ecologically realistic climate change experiments that incorporate interactions. Without them accurate predictions about the likely deleterious impacts to marine biodiversity and ecosystem functioning over the next century will not be possible. PMID:23610641

Meta-analysis reveals complex marine biological responses to the interactive effects of ocean acidification and warming.

PubMed

Harvey, Ben P; Gwynn-Jones, Dylan; Moore, Pippa J

2013-04-01

Ocean acidification and warming are considered two of the greatest threats to marine biodiversity, yet the combined effect of these stressors on marine organisms remains largely unclear. Using a meta-analytical approach, we assessed the biological responses of marine organisms to the effects of ocean acidification and warming in isolation and combination. As expected biological responses varied across taxonomic groups, life-history stages, and trophic levels, but importantly, combining stressors generally exhibited a stronger biological (either positive or negative) effect. Using a subset of orthogonal studies, we show that four of five of the biological responses measured (calcification, photosynthesis, reproduction, and survival, but not growth) interacted synergistically when warming and acidification were combined. The observed synergisms between interacting stressors suggest that care must be made in making inferences from single-stressor studies. Our findings clearly have implications for the development of adaptive management strategies particularly given that the frequency of stressors interacting in marine systems will be likely to intensify in the future. There is now an urgent need to move toward more robust, holistic, and ecologically realistic climate change experiments that incorporate interactions. Without them accurate predictions about the likely deleterious impacts to marine biodiversity and ecosystem functioning over the next century will not be possible.

Ocean Fertilization and Ocean Acidification

NASA Astrophysics Data System (ADS)

Cao, L.; Caldeira, K.

2008-12-01

It has been suggested that ocean fertilization could help diminish ocean acidification. Here, we quantitatively evaluate this suggestion. Ocean fertilization is one of several ocean methods proposed to mitigate atmospheric CO2 concentrations. The basic idea of this method is to enhance the biological uptake of atmospheric CO2 by stimulating net phytoplankton growth through the addition of iron to the surface ocean. Concern has been expressed that ocean fertilization may not be very effective at reducing atmospheric CO2 concentrations and may produce unintended environmental consequences. The rationale for thinking that ocean fertilization might help diminish ocean acidification is that dissolved inorganic carbon concentrations in the near-surface equilibrate with the atmosphere in about a year. If ocean fertilization could reduce atmospheric CO2 concentrations, it would also reduce surface ocean dissolved inorganic carbon concentrations, and thus diminish the degree of ocean acidification. To evaluate this line of thinking, we use a global ocean carbon cycle model with a simple representation of marine biology and investigate the maximum potential effect of ocean fertilization on ocean carbonate chemistry. We find that the effect of ocean fertilization on ocean acidification depends, in part, on the context in which ocean fertilization is performed. With fixed emissions of CO2 to the atmosphere, ocean fertilization moderately mitigates changes in ocean carbonate chemistry near the ocean surface, but at the expense of further acidifying the deep ocean. Under the SRES A2 CO2 emission scenario, by year 2100 simulated atmospheric CO2, global mean surface pH, and saturation state of aragonite is 965 ppm, 7.74, and 1.55 for the scenario without fertilization and 833 ppm, 7.80, and 1.71 for the scenario with 100-year (between 2000 and 2100) continuous fertilization for the global ocean (For comparison, pre-industrial global mean surface pH and saturation state of

Somewhere, Beyond the Sea: Advancing Geochemical Sensor Technologies for Biological and Abiotic Analyses on Ocean Worlds

NASA Astrophysics Data System (ADS)

Girguis, P. R.; Hoer, D.; Michel, A.; Wankel, S. D.; Baker, I.; Farr, N.

2018-05-01

Here we present our data from recent efforts aimed at examining the relationships among abiotic and biological processes in our ocean. These technologies may help us address that enduring question as to whether life exists on other celestial bodies.

Global ocean monitoring for the World Climate Research Programme.

PubMed

Revelle, R; Bretherton, F

1986-07-01

-"Tropical Oceans and Global Atmosphere (TOGA)"-will be undertaken to sudy the sequence of events of air-sea interactions in the tropical oceans and their impact on climatic variations on land-for example, variations in the strength and location of the Indian Ocean monsoon, droughts in low latitudes, and climatic fluctuations in temperate latitudes.Experimental and continuing time series will be taken at fixed locations to obtain a better picture of the magnitude and causes of ocean climate variability. National and multinational systematic repeated measurements along selected ocean transects or in specific ocean areas will be taken to determine oceanic variability and teleconnections between oceanic and atmospheric processes. Examples are the long Japanese section along the meridian of 137° E and the 'Sections' program of the USSR and several other countries in Energy-Active zones.The results from this wide range of observations and experiments will be used to guide and define mathematical models of the ocean circulation and its interactions with the atmosphere.It can be shown that biogeochemical processes in the ocean play an important role in determining the carbon dioxide content of the atmosphere and thus in causing long-term climatic changes. Variations in the biological productivity of sub-surface waters cause variations in the effectveness of the biological pump which carries organic carbon down into deeper waters where it is oxidized. Studies of ice cores from 20 000 to 30 000 yr before the present indicate that atmospheric carbon dioxide varied by a factor of 2 within times of the order of 100 yr, and these variations were accompanied by large excursions in atmospheric temperature. Thus, ocean climatic monitoring must take into account measurements of both biological and physical variations in the ocean.

The Proposal for the NASA Sensor Intercalibration and Merger for Biological and Interdisciplinary Oceanic Studies(SIMBIOS) Program, 1995

NASA Technical Reports Server (NTRS)

McClain, Charles; Esaias, Wayne; Feldman, Gene; Gregg, Watson; Hooker, Stanford; Frouin, Robert

2002-01-01

As a result of the Earth Observing System (EOS) restructuring exercise during the last half of fiscal year 1994, the EOS Color mission, which was scheduled to be a data-buy with a 1998 launch was dropped from the EOS mission manifest primarily because of the number of international ocean color missions scheduled for launch in the 1998 time frame. In lieu of a new mission, NASA Goddard Space Flight Center (GSFC) was tasked by NASA Headquarters to develop an ocean color satellite calibration and validation plan for multiple sensors. The objective of the activity was to develop a methodology and operational capability to combine data products from the various ocean color missions in a manner that ensures the best possible global coverage and data quality. The program was called the Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) project coined from the biological term "symbiosis." This document is the original proposal that was developed and submitted in May 1995. SIMBIOS was approved in 1996 and initiated in 1997 with a project office and technical staff at GSFC and a science team to assist in the development of validation data sets, sensor calibration, atmospheric correction, and bio-optical and data merger algorithms. Since its inception, the SIMBIOS program has resulted in a broad-based international collaboration on the calibration and validation of a number of ocean color satellites.

Impacts of atmospheric variability on a coupled upper-ocean/ecosystem model of the subarctic Northeast Pacific

NASA Astrophysics Data System (ADS)

Monahan, Adam Hugh; Denman, Kenneth L.

2004-06-01

The biologically-mediated flux of carbon from the upper ocean to below the permanent thermocline (the biological pump) is estimated to be ˜10 PgC/yr [, 2001], and plays an important role in the global carbon cycle. A detailed quantitative understanding of the dynamics of the biological pump is therefore important, particularly in terms of its potential sensitivity to climate change and its role in this change via feedback processes. Previous studies of coupled upper-ocean/planktonic ecosystem dynamics have considered models forced by observed atmospheric variability or by smooth annual and diurnal cycles. The second approach has the drawback that environmental variability is ubiquitous in the climate system, and may have a nontrivial impact on the (nonlinear) dynamics of the system, while the first approach is limited by the fact that observed time series are generally too short to obtain statistically robust characterizations of variability in the system. In the present study, an empirical stochastic model of high-frequency atmospheric variability (with a decorrelation timescale of less than a week) is estimated from long-term observations at Ocean Station Papa in the northeast subarctic Pacific. This empirical model, the second-order statistics of which resemble those of the observations to a good approximation, is used to produce very long (1000-year) realizations of atmospheric variability which are used to drive a coupled upper-ocean/ecosystem model. It is found that fluctuations in atmospheric forcing do not have an essential qualitative impact on most aspects of the dynamics of the ecosystem when primary production is limited by the availability of iron, although pronounced interannual variability in diatom abundance is simulated (even in the absence of episodic iron fertilization). In contrast, the impacts of atmospheric variability are considerably more significant when phytoplankton growth is limited in the summer by nitrogen availability, as observed

Biological responses to environmental heterogeneity under future ocean conditions.

PubMed

Boyd, Philip W; Cornwall, Christopher E; Davison, Andrew; Doney, Scott C; Fourquez, Marion; Hurd, Catriona L; Lima, Ivan D; McMinn, Andrew

2016-08-01

Organisms are projected to face unprecedented rates of change in future ocean conditions due to anthropogenic climate-change. At present, marine life encounters a wide range of environmental heterogeneity from natural fluctuations to mean climate change. Manipulation studies suggest that biota from more variable marine environments have more phenotypic plasticity to tolerate environmental heterogeneity. Here, we consider current strategies employed by a range of representative organisms across various habitats - from short-lived phytoplankton to long-lived corals - in response to environmental heterogeneity. We then discuss how, if and when organismal responses (acclimate/migrate/adapt) may be altered by shifts in the magnitude of the mean climate-change signal relative to that for natural fluctuations projected for coming decades. The findings from both novel climate-change modelling simulations and prior biological manipulation studies, in which natural fluctuations are superimposed on those of mean change, provide valuable insights into organismal responses to environmental heterogeneity. Manipulations reveal that different experimental outcomes are evident between climate-change treatments which include natural fluctuations vs. those which do not. Modelling simulations project that the magnitude of climate variability, along with mean climate change, will increase in coming decades, and hence environmental heterogeneity will increase, illustrating the need for more realistic biological manipulation experiments that include natural fluctuations. However, simulations also strongly suggest that the timescales over which the mean climate-change signature will become dominant, relative to natural fluctuations, will vary for individual properties, being most rapid for CO2 (~10 years from present day) to 4 decades for nutrients. We conclude that the strategies used by biota to respond to shifts in environmental heterogeneity may be complex, as they will have to

How strange was the Strangelove Ocean? New insights from Boron Isotopes.

NASA Astrophysics Data System (ADS)

Henehan, M. J.; Ridgwell, A.; Thomas, E.; Zhang, S.; Planavsky, N.; Alegret, L.; Schmidt, D. N.; Rae, J. W. B.; Foster, G. L.; Huber, B. T.; Hull, P. M.

2016-12-01

The idea of the `Strangelove Ocean'1 has captured the imagination of palaeoceanographers (and the public) since it was posited to explain the collapse or reverse in surface-deep ocean δ13C gradients after the Cretaceous-Palaeogene (K-Pg) boundary1. It describes a post-extinction ocean where primary productivity was drastically reduced, eliminating the surface-to-deep carbon isotope gradient produced by the biological pump. Survival of benthic foraminifera across the K-Pg (suggesting a persistent supply of organic matter to the deep) is difficult to reconcile with this ideae.g. 2. Geochemical proxies also suggest that severe export productivity reductions were at most regional3. This mismatch between patterns in δ13C and other indicators has thus been interpreted as a signal of changing vital effects in post-extinction pelagic calcifiers, toward lighter δ13C e.g. 2. However, it may be that vital effects in earliest Palaeocene foraminiferal survivors can account for only part of the convergence in δ13C between surface and deep ocean.4 In addition, analysis of carbonate preservation after the K-Pg boundary indicates large-scale carbonate system/ocean pH shifts at this time5, which could have produced secular changes in carbon isotope signals. Here we present new paired benthic and planktic boron isotope measurements that allow us to examine surface to deep ocean pH gradients (which in today's ocean are driven largely by biological activity) across the K-Pg boundary interval and into the early Palaeocene. We then couple these to model simulations to untangle the carbon cycle drivers, both physical and biological, that could have caused these changes in ocean pH gradients. We discuss implications for our understanding of this important interval in Earth history, with reference to the mechanisms of Earth system recovery following mass extinction. References:1. Hsü, K. J. & McKenzie, J. A., 1985. AGU Geophysical Monograph Series 32. doi:10.1029/GM032p0487 2. Alegret

Warm ocean processes and carbon cycling in the Eocene.

PubMed

John, Eleanor H; Pearson, Paul N; Coxall, Helen K; Birch, Heather; Wade, Bridget S; Foster, Gavin L

2013-10-28

Sea surface and subsurface temperatures over large parts of the ocean during the Eocene epoch (55.5-33.7 Ma) exceeded modern values by several degrees, which must have affected a number of oceanic processes. Here, we focus on the effect of elevated water column temperatures on the efficiency of the biological pump, particularly in relation to carbon and nutrient cycling. We use stable isotope values from exceptionally well-preserved planktonic foraminiferal calcite from Tanzania and Mexico to reconstruct vertical carbon isotope gradients in the upper water column, exploiting the fact that individual species lived and calcified at different depths. The oxygen isotope ratios of different species' tests are used to estimate the temperature of calcification, which we converted to absolute depths using Eocene temperature profiles generated by general circulation models. This approach, along with potential pitfalls, is illustrated using data from modern core-top assemblages from the same area. Our results indicate that, during the Early and Middle Eocene, carbon isotope gradients were steeper (and larger) through the upper thermocline than in the modern ocean. This is consistent with a shallower average depth of organic matter remineralization and supports previously proposed hypotheses that invoke high metabolic rates in a warm Eocene ocean, leading to more efficient recycling of organic matter and reduced burial rates of organic carbon.

Seasonally different carbon flux changes in the Southern Ocean in response to the southern annular mode.

PubMed

Hauck, J; Völker, C; Wang, T; Hoppema, M; Losch, M; Wolf-Gladrow, D A

2013-12-01

Stratospheric ozone depletion and emission of greenhouse gases lead to a trend of the southern annular mode (SAM) toward its high-index polarity. The positive phase of the SAM is characterized by stronger than usual westerly winds that induce changes in the physical carbon transport. Changes in the natural carbon budget of the upper 100 m of the Southern Ocean in response to a positive SAM phase are explored with a coupled ecosystem-general circulation model and regression analysis. Previously overlooked processes that are important for the upper ocean carbon budget during a positive SAM period are identified, namely, export production and downward transport of carbon north of the polar front (PF) as large as the upwelling in the south. The limiting micronutrient iron is brought into the surface layer by upwelling and stimulates phytoplankton growth and export production but only in summer. This leads to a drawdown of carbon and less summertime outgassing (or more uptake) of natural CO 2 . In winter, biological mechanisms are inactive, and the surface ocean equilibrates with the atmosphere by releasing CO 2 . In the annual mean, the upper ocean region south of the PF loses more carbon by additional export production than by the release of CO 2 into the atmosphere, highlighting the role of the biological carbon pump in response to a positive SAM event.

Quantitative estimation of global patterns of surface ocean biological productivity and its seasonal variation on timescales from centuries to millennia

NASA Astrophysics Data System (ADS)

Loubere, Paul; Fariduddin, Mohammad

1999-03-01

We present a quantitative method, based on the relative abundances of benthic foraminifera in deep-sea sediments, for estimating surface ocean biological productivity over the timescale of centuries to millennia. We calibrate the method using a global data set composed of 207 samples from the Atlantic, Pacific, and Indian Oceans from a water depth range between 2300 and 3600 m. The sample set was developed so that other, potentially significant, environmental variables would be uncorrelated to overlying surface ocean productivity. A regression of assemblages against productivity yielded an r2 = 0.89 demonstrating a strong productivity signal in the faunal data. In addition, we examined assemblage response to annual variability in biological productivity (seasonality). Our data set included a range of seasonalities which we quantified into a seasonality index using the pigment color bands from the coastal zone color scanner (CZCS). The response of benthic foraminiferal assemblage composition to our seasonality index was tested with regression analysis. We obtained a statistically highly significant r2 = 0.75. Further, discriminant function analysis revealed a clear separation among sample groups based on surface ocean productivity and our seasonality index. Finally, we tested the response of benthic foraminiferal assemblages to three different modes of seasonality. We observed a distinct separation of our samples into groups representing low seasonal variability, strong seasonality with a single main productivity event in the year, and strong seasonality with multiple productivity events in the year. Reconstructing surface ocean biological productivity with benthic foraminifera will aid in modeling marine biogeochemical cycles. Also, estimating mode and range of annual seasonality will provide insight to changing oceanic processes, allowing the examination of the mechanisms causing changes in the marine biotic system over time. This article contains supplementary

Comparison of two approaches to quantify anthropogenic CO2 in the ocean: Results from the northern Indian Ocean

NASA Astrophysics Data System (ADS)

Coatanoan, C.; Goyet, C.; Gruber, N.; Sabine, C. L.; Warner, M.

2001-03-01

This study compares two recent estimates of anthropogenic CO2 in the northern Indian Ocean along the World Ocean Circulation Experiment cruise II [Goyet et al., 1999; Sabine et al., 1999]. These two studies employed two different approaches to separate the anthropogenic CO2 signal from the large natural background variability. Sabine et al. [1999] used the ΔC* approach first described by Gruber et al. [1996], whereas Goyet et al. [1999] used an optimum multiparameter mixing analysis referred to as the MIX approach. Both approaches make use of similar assumptions in order to remove variations due to remineralization of organic matter and the dissolution of calcium carbonates (biological pumps). However, the two approaches use very different hypotheses in order to account for variations due to physical processes including mixing and the CO2 solubility pump. Consequently, substantial differences exist in the upper thermocline approximately between 200 and 600 m. Anthropogenic CO2 concentrations estimated using the ΔC* approach average 12 ± 4 μmol kg-1 higher in this depth range than concentrations estimated using the MIX approach. Below ˜800 m, the MIX approach estimates slightly higher anthropogenic CO2 concentrations and a deeper vertical penetration. Despite this compensatory effect, water column inventories estimated in the 0-3000 m depth range by the ΔC* approach are generally ˜20% higher than those estimated by the MIX approach, with this difference being statistically significant beyond the 0.001 level. We examine possible causes for these differences and identify a number of critical additional measurements that will make it possible to discriminate better between the two approaches.

Maintenance of submersible pumps in the septic tanks: ergonomic and biological risks to the worker.

PubMed

Mariño, Suzi; Figueiredo, Alex

2012-01-01

In this study was observed the maintenance task of submersible pumps septic tanks installed in industrial bathrooms. This maintenance activity operators are exposed to various biological and ergonomic risks. This type of activity requires its great physical performers who are also subject to contact with human waste in the form of liquids, gases and solids. Besides the problems mentioned, are still exposed to high temperatures that can cause diseases such as hyperthermia or heatstroke. These aspects were observed using the ergonomic assessment methodology in order to suggest improvements that are reflected in productivity and employee satisfaction.

Diagnosing oceanic nutrient deficiency

PubMed Central

2016-01-01

The supply of a range of nutrient elements to surface waters is an important driver of oceanic production and the subsequent linked cycling of the nutrients and carbon. Relative deficiencies of different nutrients with respect to biological requirements, within both surface and internal water masses, can be both a key indicator and driver of the potential for these nutrients to become limiting for the production of new organic material in the upper ocean. The availability of high-quality, full-depth and global-scale datasets on the concentrations of a wide range of both macro- and micro-nutrients produced through the international GEOTRACES programme provides the potential for estimation of multi-element deficiencies at unprecedented scales. Resultant coherent large-scale patterns in diagnosed deficiency can be linked to the interacting physical–chemical–biological processes which drive upper ocean nutrient biogeochemistry. Calculations of ranked deficiencies across multiple elements further highlight important remaining uncertainties in the stoichiometric plasticity of nutrient ratios within oceanic microbial systems and caveats with regards to linkages to upper ocean nutrient limitation. This article is part of the themed issue ‘Biological and climatic impacts of ocean trace element chemistry’. PMID:29035255

Diagnosing oceanic nutrient deficiency

NASA Astrophysics Data System (ADS)

Moore, C. Mark

2016-11-01

The supply of a range of nutrient elements to surface waters is an important driver of oceanic production and the subsequent linked cycling of the nutrients and carbon. Relative deficiencies of different nutrients with respect to biological requirements, within both surface and internal water masses, can be both a key indicator and driver of the potential for these nutrients to become limiting for the production of new organic material in the upper ocean. The availability of high-quality, full-depth and global-scale datasets on the concentrations of a wide range of both macro- and micro-nutrients produced through the international GEOTRACES programme provides the potential for estimation of multi-element deficiencies at unprecedented scales. Resultant coherent large-scale patterns in diagnosed deficiency can be linked to the interacting physical-chemical-biological processes which drive upper ocean nutrient biogeochemistry. Calculations of ranked deficiencies across multiple elements further highlight important remaining uncertainties in the stoichiometric plasticity of nutrient ratios within oceanic microbial systems and caveats with regards to linkages to upper ocean nutrient limitation. This article is part of the themed issue 'Biological and climatic impacts of ocean trace element chemistry'.

The great 2012 Arctic Ocean summer cyclone enhanced biological productivity on the shelves

PubMed Central

Zhang, Jinlun; Ashjian, Carin; Campbell, Robert; Hill, Victoria; Spitz, Yvette H; Steele, Michael

2014-01-01

[1] A coupled biophysical model is used to examine the impact of the great Arctic cyclone of early August 2012 on the marine planktonic ecosystem in the Pacific sector of the Arctic Ocean (PSA). Model results indicate that the cyclone influences the marine planktonic ecosystem by enhancing productivity on the shelves of the Chukchi, East Siberian, and Laptev seas during the storm. Although the cyclone's passage in the PSA lasted only a few days, the simulated biological effects on the shelves last 1 month or longer. At some locations on the shelves, primary productivity (PP) increases by up to 90% and phytoplankton biomass by up to 40% in the wake of the cyclone. The increase in zooplankton biomass is up to 18% on 31 August and remains 10% on 15 September, more than 1 month after the storm. In the central PSA, however, model simulations indicate a decrease in PP and plankton biomass. The biological gain on the shelves and loss in the central PSA are linked to two factors. (1) The cyclone enhances mixing in the upper ocean, which increases nutrient availability in the surface waters of the shelves; enhanced mixing in the central PSA does not increase productivity because nutrients there are mostly depleted through summer draw down by the time of the cyclone's passage. (2) The cyclone also induces divergence, resulting from the cyclone's low-pressure system that drives cyclonic sea ice and upper ocean circulation, which transports more plankton biomass onto the shelves from the central PSA. The simulated biological gain on the shelves is greater than the loss in the central PSA, and therefore, the production on average over the entire PSA is increased by the cyclone. Because the gain on the shelves is offset by the loss in the central PSA, the average increase over the entire PSA is moderate and lasts only about 10 days. The generally positive impact of cyclones on the marine ecosystem in the Arctic, particularly on the shelves, is likely to grow with increasing

The great 2012 Arctic Ocean summer cyclone enhanced biological productivity on the shelves.

PubMed

Zhang, Jinlun; Ashjian, Carin; Campbell, Robert; Hill, Victoria; Spitz, Yvette H; Steele, Michael

2014-01-01

[1] A coupled biophysical model is used to examine the impact of the great Arctic cyclone of early August 2012 on the marine planktonic ecosystem in the Pacific sector of the Arctic Ocean (PSA). Model results indicate that the cyclone influences the marine planktonic ecosystem by enhancing productivity on the shelves of the Chukchi, East Siberian, and Laptev seas during the storm. Although the cyclone's passage in the PSA lasted only a few days, the simulated biological effects on the shelves last 1 month or longer. At some locations on the shelves, primary productivity (PP) increases by up to 90% and phytoplankton biomass by up to 40% in the wake of the cyclone. The increase in zooplankton biomass is up to 18% on 31 August and remains 10% on 15 September, more than 1 month after the storm. In the central PSA, however, model simulations indicate a decrease in PP and plankton biomass. The biological gain on the shelves and loss in the central PSA are linked to two factors. (1) The cyclone enhances mixing in the upper ocean, which increases nutrient availability in the surface waters of the shelves; enhanced mixing in the central PSA does not increase productivity because nutrients there are mostly depleted through summer draw down by the time of the cyclone's passage. (2) The cyclone also induces divergence, resulting from the cyclone's low-pressure system that drives cyclonic sea ice and upper ocean circulation, which transports more plankton biomass onto the shelves from the central PSA. The simulated biological gain on the shelves is greater than the loss in the central PSA, and therefore, the production on average over the entire PSA is increased by the cyclone. Because the gain on the shelves is offset by the loss in the central PSA, the average increase over the entire PSA is moderate and lasts only about 10 days. The generally positive impact of cyclones on the marine ecosystem in the Arctic, particularly on the shelves, is likely to grow with increasing

Ocean science. Enhanced: internal tides and ocean mixing.

PubMed

Garrett, Chris

2003-09-26

Recent satellite and in situ observations have shown that at ocean ridges and other seafloor topographic features, a substantial amount of energy is transferred from the main ocean tides into "internal tides." In his Perspective, Garrett explains how these internal waves with tidal periods propagate through the density-stratified deep ocean and eventually break down into turbulence. The resulting mixing affects ocean stratification and ocean circulation. It thus influences climate as well as biological production. The energy for the internal tides is derived from the rotational energy of the Earth-Moon system changes of the length of the day and the distance to the Moon.

Global Ocean Vertical Velocity From a Dynamically Consistent Ocean State Estimate

NASA Astrophysics Data System (ADS)

Liang, Xinfeng; Spall, Michael; Wunsch, Carl

2017-10-01

Estimates of the global ocean vertical velocities (Eulerian, eddy-induced, and residual) from a dynamically consistent and data-constrained ocean state estimate are presented and analyzed. Conventional patterns of vertical velocity, Ekman pumping, appear in the upper ocean, with topographic dominance at depth. Intense and vertically coherent upwelling and downwelling occur in the Southern Ocean, which are likely due to the interaction of the Antarctic Circumpolar Current and large-scale topographic features and are generally canceled out in the conventional zonally averaged results. These "elevators" at high latitudes connect the upper to the deep and abyssal oceans and working together with isopycnal mixing are likely a mechanism, in addition to the formation of deep and abyssal waters, for fast responses of the deep and abyssal oceans to the changing climate. Also, Eulerian and parameterized eddy-induced components are of opposite signs in numerous regions around the global ocean, particularly in the ocean interior away from surface and bottom. Nevertheless, residual vertical velocity is primarily determined by the Eulerian component, and related to winds and large-scale topographic features. The current estimates of vertical velocities can serve as a useful reference for investigating the vertical exchange of ocean properties and tracers, and its complex spatial structure ultimately permits regional tests of basic oceanographic concepts such as Sverdrup balance and coastal upwelling/downwelling.

Relevance of peat-draining rivers for the riverine input of dissolved iron into the ocean.

PubMed

Krachler, Regina; Krachler, Rudolf F; von der Kammer, Frank; Süphandag, Altan; Jirsa, Franz; Ayromlou, Shahram; Hofmann, Thilo; Keppler, Bernhard K

2010-05-01

Peat bogs have the ability to produce strong chelate ligands (humic and fulvic acids) which enhance the weathering rates of iron-silicate minerals and greatly increase the solubility of the essential trace metal iron in river water. Fluvial networks link peat bogs with the ocean, and thus terrestrial-derived fulvic-iron complexes fuel the ocean's biological productivity and biological carbon pump, but understanding this role is constrained by inconsistent observations regarding the behaviour of riverine iron in the estuarine mixing zone, where precipitation reactions remove iron from the water column. We applied a characterization of the colloidal iron carriers in peatland-draining rivers in North Scotland, using field-flow fractionation (FFF), in combination with end-member mixing experiments of river water sampled near the river mouth and coastal seawater using a (59)Fe radiotracer method. According to our results, the investigated river contributed "truly dissolved" Fe concentrations of about 3300nmolL(-1) to the ocean which is nearly two orders of magnitude higher than the dissolved iron contribution of the "average world" river ( approximately 40nmolL(-1)). Thus we conclude that peatland-draining rivers are important sources of dissolved iron to the ocean margins. We propose highly electrostatic and sterical stabilized iron-organic matter complexes in the size range of <2kDa to be responsible for iron transport across the estuarine mixing zone. Copyright 2010 Elsevier B.V. All rights reserved.

Marine biology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thurman, H.V.; Webber, H.H.

1984-01-01

This book discusses both taxonomic and ecological topics on marine biology. Full coverage of marine organisms of all five kingdoms is provided, along with interesting and thorough discussion of all major marine habitats. Organization into six major parts allows flexibility. It also provides insight into important topics such as disposal of nuclear waste at sea, the idea that life began on the ocean floor, and how whales, krill, and people interact. A full-color photo chapter reviews questions, and exercises. The contents are: an overview marine biology: fundamental concepts/investigating life in the ocean; the physical ocean, the ocean floor, the naturemore » of water, the nature and motion of ocean water; general ecology, conditions for life in the sea, biological productivity and energy transfer; marine organisms; monera, protista, mycota and metaphyta; the smaller marine animals, the large animals marine habitats, the intertidal zone/benthos of the continental shelf, the photic zone, the deep ocean, the ocean under stress, marine pollution, appendix a: the metric system and conversion factors/ appendix b: prefixes and suffixes/ appendix c: taxonomic classification of common marine organisms, and glossary, and index.« less

Radiocarbon constraints on the glacial ocean circulation and its impact on atmospheric CO2

PubMed Central

Skinner, L. C.; Primeau, F.; Freeman, E.; de la Fuente, M.; Goodwin, P. A.; Gottschalk, J.; Huang, E.; McCave, I. N.; Noble, T. L.; Scrivner, A. E.

2017-01-01

While the ocean’s large-scale overturning circulation is thought to have been significantly different under the climatic conditions of the Last Glacial Maximum (LGM), the exact nature of the glacial circulation and its implications for global carbon cycling continue to be debated. Here we use a global array of ocean–atmosphere radiocarbon disequilibrium estimates to demonstrate a ∼689±53 14C-yr increase in the average residence time of carbon in the deep ocean at the LGM. A predominantly southern-sourced abyssal overturning limb that was more isolated from its shallower northern counterparts is interpreted to have extended from the Southern Ocean, producing a widespread radiocarbon age maximum at mid-depths and depriving the deep ocean of a fast escape route for accumulating respired carbon. While the exact magnitude of the resulting carbon cycle impacts remains to be confirmed, the radiocarbon data suggest an increase in the efficiency of the biological carbon pump that could have accounted for as much as half of the glacial–interglacial CO2 change. PMID:28703126

Thermally Actuated Hydraulic Pumps

NASA Technical Reports Server (NTRS)

Jones, Jack; Ross, Ronald; Chao, Yi

2008-01-01

Thermally actuated hydraulic pumps have been proposed for diverse applications in which direct electrical or mechanical actuation is undesirable and the relative slowness of thermal actuation can be tolerated. The proposed pumps would not contain any sliding (wearing) parts in their compressors and, hence, could have long operational lifetimes. The basic principle of a pump according to the proposal is to utilize the thermal expansion and contraction of a wax or other phase-change material in contact with a hydraulic fluid in a rigid chamber. Heating the chamber and its contents from below to above the melting temperature of the phase-change material would cause the material to expand significantly, thus causing a substantial increase in hydraulic pressure and/or a substantial displacement of hydraulic fluid out of the chamber. Similarly, cooling the chamber and its contents from above to below the melting temperature of the phase-change material would cause the material to contract significantly, thus causing a substantial decrease in hydraulic pressure and/or a substantial displacement of hydraulic fluid into the chamber. The displacement of the hydraulic fluid could be used to drive a piston. The figure illustrates a simple example of a hydraulic jack driven by a thermally actuated hydraulic pump. The pump chamber would be a cylinder containing encapsulated wax pellets and containing radial fins to facilitate transfer of heat to and from the wax. The plastic encapsulation would serve as an oil/wax barrier and the remaining interior space could be filled with hydraulic oil. A filter would retain the encapsulated wax particles in the pump chamber while allowing the hydraulic oil to flow into and out of the chamber. In one important class of potential applications, thermally actuated hydraulic pumps, exploiting vertical ocean temperature gradients for heating and cooling as needed, would be used to vary hydraulic pressures to control buoyancy in undersea research

Ventilation of the deep Southern Ocean and changes in atmospheric CO2 during the last deglacial and glacial periods

NASA Astrophysics Data System (ADS)

Gottschalk, J.; Skinner, L. C.; Lippold, J. A.; Jaccard, S.; Vogel, H.; Frank, N.; Waelbroeck, C.

2014-12-01

The Southern Ocean is thought to have played a key role in atmospheric CO2 (CO2,atm) variations, both via its role in bringing carbon-rich deep-waters into contact with the atmosphere, and via its capacity for enhanced biologically mediated carbon export into the deep sea. The governing mechanisms of millennial scale rises in CO2,atm during the last deglacial and glacial periods have been linked controversially either with variations in biological export productivity, possibly driven by fluctuations in airborne dust supply, or to variations in southern high-latitude vertical mixing, possibly driven by changes in westerly wind stress or density stratification across the Southern Ocean water column. However, the impact of these processes on deep, southern high-latitude carbon sequestration and ocean-atmosphere CO2 exchange remain ambiguous. We present proxy evidence for the link between deep carbon storage in the sub-Antarctic Atlantic with changes in CO2,atm during the last 70 ka from sub-millennially resolved changes in bottom water oxygenation based on the uranium accumulation in authigenic coatings on foraminiferal shells and the δ13C offset between epibenthic and infaunal foraminifera (Δδ13C). We compare our results with reconstructed opal fluxes and sediment model output data to assess the impact of physical and biological processes on Southern Ocean carbon storage. While variations in sub-Antarctic Atlantic export production are intrinsically linked with changes in airborne dust supply supporting the major impact of dust on the biological soft-tissue pump, they cannot account for observed changes in pore water organic carbon respiration indicated by increasing Δδ13C and therefore, bottom water oxygen changes in the deep sub-Antarctic Atlantic. This is in strong support of millennial-scale fluctuations in deep Southern Ocean carbon storage primarily controlled by the ventilation of the deep ocean by southern-sourced water masses, which emphasize the strong

Ocean thermal plant

NASA Technical Reports Server (NTRS)

Owens, L. J. (Inventor)

1978-01-01

A floating energy converter is described which uses large volumes of sea water to produce electrical power. In this plant, a fluid working medium is pumped to an evaporator where is is heated by a flow of warm surface sea water. The fluid in liquid form boils to a pressurized gas vapor which is routed to drive a turbine that, in turn, drives a generator for producing electricity. The gas vapor then enters a condenser immersed in cold sea water pumped from lower depths, condenses to its original liquid form, and then pumped to the evaporator to repeat the cycle. Modular components can be readily interchanged on the ocean thermal unit and inlet pipes for the sea water are provided with means for maintaining the pipes in alignment with the oncoming current. The modular construction allows for the testing of various components to provide a more rapid optimization of a standardized plant.

Anthropogenic Impacts on Biological Carbon Sequestration in the Coastal Waters

NASA Astrophysics Data System (ADS)

Jiao, N.

2016-02-01

The well-known biological mechanism for carbon sequestration in the ocean is the biological pump (BP) which is driven by primary production initially in the surface water and then dependent on particulate organic carbon sinking process in the water column. In contrast microbial carbon pump (MCP) depends on microbial transformation of dissolved organic carbon (DOC) to refractory DOC (RDOC).Although the BP and the MCP are distinct mechanisms, they are intertwined. Both mechanisms should be considered regarding maximum sequestration of carbon in the ocean. Recent studies have showed that excess nutrients could facilitate the uptake of DOC and enhance both bacterial production and respiration. Bacterial growth efficiency increases with increasing nitrogen concentration to certain levels and then decreases thereafter, while the remaining DOC in the water usually decreases with increasing nitrogen concentration, suggesting that excess nitrogen could simulate uptake of DOC in the environment and thus have negative impacts on the ocean DOC storage.This is somehow against the case of the BP which is known to increase with increasing availability of nutrients. Another responsible factor is the nature of algal products. If it is labile, the organic carbon cannot be preserved in the environment.On top of that, labile organic carbon has priming effects for river discharged semi-labile DOC for bacterial respiration.That is, labile organic matter will become the incubator for bacteria. While bacteria respire DOC into CO2, they consume oxygen, and finally result in hypoxia. Under anoxic condition, anaerobic bacteria successively work on the rest of the organic carbon and produce harmful gasses such as methane and H2S. Such story did have happened during geological events in the history of the earth. The above processes not only result in ecological disasters but also reduce the capacity of carbon sequestration in the ocean. To achieve maximum carbon sinks, both BP and MCP should

Uranium Stable Isotopes: A Proxy For Productivity Or Ocean Oxygenation?

NASA Astrophysics Data System (ADS)

Severmann, S.

2015-12-01

Uranium elemental abundances in sediments have traditionally been used to reconstruct primary productivity and carbon flux in the ocean. 238U/235U isotope compositions, in contrast, are currently understood to reflect the extent of bottom water anoxia in the ocean. A review of our current understanding of authigenic U enrichment mechanism into reducing sediments suggests that a revision of this interpretation is warranted. Specifically, the current interpretation of U isotope effects in suboxic vs. anoxic deposits has not taken into account the well-documented linear relationship with organic C burial rates. Although organic C rain rates (i.e., surface productivity) and bottom water oxygenation are clearly related, distinction between these two environmental controls is conceptually important as it relates to the mechanism of enhanced C burial and ultimately the strength of the biological pump. Here we will review new and existing data to test the hypothesis that the isotope composition of authigenic U in reducing sediments are best described by their relationship with parameters related to organic carbon delivery and burial, rather than bottom water oxygen concentration.

Amino acid stable isotope applications to deep-sea corals: A molecular geochemistry approach to reconstructing past ocean conditions

NASA Astrophysics Data System (ADS)

McMahon, K.; McCarthy, M. D.; Guilderson, T. P.; Sherwood, O.; Williams, B.; Larsen, T.; Glynn, D. S.

2017-12-01

Future climate change is predicted to alter ocean productivity, food web dynamics, biogeochemical cycling, and the efficacy of the biological pump. Proteinaceous deep-sea corals act as "living sediment traps," providing long-term, high-resolution records of exported surface ocean production and a window into past changes in ocean condition as a historical context for potential future changes. Here, we present recent work developing the application of compound-specific stable isotope analysis of individual amino acids to proteinaceous deep-sea corals to reconstruct past changes in phytoplankton community composition and biogeochemical cycling. We present new calibrations for molecular isotope comparisons between metabolically active coral polyp tissue and bioarchival proteinaceous skeleton. We then applied these techniques to deep-sea corals from the North Pacific Subtropical Gyre (NPSG) to reconstruct centennial to millennial time scale changes in phytoplankton community composition and biogeochemical cycling as a function of regional climate change. This work suggests that the NPSG has undergone multiple major phytoplankton regime shifts over the last millennium between prokaryotic and eukaryotic phytoplankton communities and associated sources of nitrogen fueling production. The most recent regime, which started around the end of the Little Ice Age and the onset of the Industrial era, is unprecedented in the last 1000 years and resulted in a 30-50% increase in diazotrophic cyanobacteria contribution to export production and an associated 17-27% increase in N2-fixation in the NPSG over last century. By offering the first direct phylogenetic context for long-term shifts in isotopic records of exported particulate organic matter, our data represent a major step forward in understanding the evolution of marine plankton community dynamics, food web architecture, biogeochemical cycling, and the climate feedback loops through the biological pump.

Decoupling physical from biological processes to assess the impact of viruses on a mesoscale algal bloom.

PubMed

Lehahn, Yoav; Koren, Ilan; Schatz, Daniella; Frada, Miguel; Sheyn, Uri; Boss, Emmanuel; Efrati, Shai; Rudich, Yinon; Trainic, Miri; Sharoni, Shlomit; Laber, Christian; DiTullio, Giacomo R; Coolen, Marco J L; Martins, Ana Maria; Van Mooy, Benjamin A S; Bidle, Kay D; Vardi, Assaf

2014-09-08

Phytoplankton blooms are ephemeral events of exceptionally high primary productivity that regulate the flux of carbon across marine food webs [1-3]. Quantification of bloom turnover [4] is limited by a fundamental difficulty to decouple between physical and biological processes as observed by ocean color satellite data. This limitation hinders the quantification of bloom demise and its regulation by biological processes [5, 6], which has important consequences on the efficiency of the biological pump of carbon to the deep ocean [7-9]. Here, we address this challenge and quantify algal blooms' turnover using a combination of satellite and in situ data, which allows identification of a relatively stable oceanic patch that is subject to little mixing with its surroundings. Using a newly developed multisatellite Lagrangian diagnostic, we decouple the contributions of physical and biological processes, allowing quantification of a complete life cycle of a mesoscale (∼10-100 km) bloom of coccolithophores in the North Atlantic, from exponential growth to its rapid demise. We estimate the amount of organic carbon produced during the bloom to be in the order of 24,000 tons, of which two-thirds were turned over within 1 week. Complimentary in situ measurements of the same patch area revealed high levels of specific viruses infecting coccolithophore cells, therefore pointing at the importance of viral infection as a possible mortality agent. Application of the newly developed satellite-based approaches opens the way for large-scale quantification of the impact of diverse environmental stresses on the fate of phytoplankton blooms and derived carbon in the ocean. Copyright © 2014 Elsevier Ltd. All rights reserved.

Seasonality of biological and physical controls on surface ocean CO2 from hourly observations at the Southern Ocean Time Series site south of Australia

NASA Astrophysics Data System (ADS)

Shadwick, E. H.; Trull, T. W.; Tilbrook, B.; Sutton, A. J.; Schulz, E.; Sabine, C. L.

2015-02-01

The Subantarctic Zone (SAZ), which covers the northern half of the Southern Ocean between the Subtropical and Subantarctic Fronts, is important for air-sea CO2 exchange, ventilation of the lower thermocline, and nutrient supply for global ocean productivity. Here we present the first high-resolution autonomous observations of mixed layer CO2 partial pressure (pCO2) and hydrographic properties covering a full annual cycle in the SAZ. The amplitude of the seasonal cycle in pCO2 (˜60 μatm), from near-atmospheric equilibrium in late winter to ˜330 μatm in midsummer, results from opposing physical and biological drivers. Decomposing these contributions demonstrates that the biological control on pCO2 (up to 100 μatm), is 4 times larger than the thermal component and driven by annual net community production of 2.45 ± 1.47 mol C m-2 yr-1. After the summer biological pCO2 depletion, the return to near-atmospheric equilibrium proceeds slowly, driven in part by autumn entrainment into a deepening mixed layer and achieving full equilibration in late winter and early spring as respiration and advection complete the annual cycle. The shutdown of winter convection and associated mixed layer shoaling proceeds intermittently, appearing to frustrate the initiation of production. Horizontal processes, identified from salinity anomalies, are associated with biological pCO2 signatures but with differing impacts in winter (when they reflect far-field variations in dissolved inorganic carbon and/or biomass) and summer (when they suggest promotion of local production by the relief of silicic acid or iron limitation). These results provide clarity on SAZ seasonal carbon cycling and demonstrate that the magnitude of the seasonal pCO2 cycle is twice as large as that in the subarctic high-nutrient, low-chlorophyll waters, which can inform the selection of optimal global models in this region.

Earth system feedback statistically extracted from the Indian Ocean deep-sea sediments recording Eocene hyperthermals.

PubMed

Yasukawa, Kazutaka; Nakamura, Kentaro; Fujinaga, Koichiro; Ikehara, Minoru; Kato, Yasuhiro

2017-09-12

Multiple transient global warming events occurred during the early Palaeogene. Although these events, called hyperthermals, have been reported from around the globe, geologic records for the Indian Ocean are limited. In addition, the recovery processes from relatively modest hyperthermals are less constrained than those from the severest and well-studied hothouse called the Palaeocene-Eocene Thermal Maximum. In this study, we constructed a new and high-resolution geochemical dataset of deep-sea sediments clearly recording multiple Eocene hyperthermals in the Indian Ocean. We then statistically analysed the high-dimensional data matrix and extracted independent components corresponding to the biogeochemical responses to the hyperthermals. The productivity feedback commonly controls and efficiently sequesters the excess carbon in the recovery phases of the hyperthermals via an enhanced biological pump, regardless of the magnitude of the events. Meanwhile, this negative feedback is independent of nannoplankton assemblage changes generally recognised in relatively large environmental perturbations.

Marine Biology Field Trip Sites. Ocean Related Curriculum Activities.

ERIC Educational Resources Information Center

Pauls, John

The ocean affects all of our lives. Therefore, awareness of and information about the interconnections between humans and oceans are prerequisites to making sound decisions for the future. Project ORCA (Ocean Related Curriculum Activities) has developed interdisciplinary curriculum materials designed to meet the needs of students and teachers…

Biology and air-sea gas exchange controls on the distribution of carbon isotope ratios (δ13C) in the ocean

NASA Astrophysics Data System (ADS)

Schmittner, A.; Gruber, N.; Mix, A. C.; Key, R. M.; Tagliabue, A.; Westberry, T. K.

2013-09-01

Analysis of observations and sensitivity experiments with a new three-dimensional global model of stable carbon isotope cycling elucidate processes that control the distribution of δ13C of dissolved inorganic carbon (DIC) in the contemporary and preindustrial ocean. Biological fractionation and the sinking of isotopically light δ13C organic matter from the surface into the interior ocean leads to low δ13CDIC values at depths and in high latitude surface waters and high values in the upper ocean at low latitudes with maxima in the subtropics. Air-sea gas exchange has two effects. First, it acts to reduce the spatial gradients created by biology. Second, the associated temperature-dependent fractionation tends to increase (decrease) δ13CDIC values of colder (warmer) water, which generates gradients that oppose those arising from biology. Our model results suggest that both effects are similarly important in influencing surface and interior δ13CDIC distributions. However, since air-sea gas exchange is slow in the modern ocean, the biological effect dominates spatial δ13CDIC gradients both in the interior and at the surface, in contrast to conclusions from some previous studies. Calcium carbonate cycling, pH dependency of fractionation during air-sea gas exchange, and kinetic fractionation have minor effects on δ13CDIC. Accumulation of isotopically light carbon from anthropogenic fossil fuel burning has decreased the spatial variability of surface and deep δ13CDIC since the industrial revolution in our model simulations. Analysis of a new synthesis of δ13CDIC measurements from years 1990 to 2005 is used to quantify preformed and remineralized contributions as well as the effects of biology and air-sea gas exchange. The model reproduces major features of the observed large-scale distribution of δ13CDIC as well as the individual contributions and effects. Residual misfits are documented and analyzed. Simulated surface and subsurface δ13CDIC are influenced by

Second Insulin Pump Safety Meeting: Summary Report

PubMed Central

Zhang, Yi; Jones, Paul L.; Klonoff, David C.

2010-01-01

Diabetes Technology Society facilitated a second meeting of insulin pump experts at Mills-Peninsula Health Services, San Mateo, California on November 4, 2009, at the request of the Food and Drug Administration, Center for Devices and Radiological Health, Office of Science and Engineering Laboratories. The first such meeting was held in Bethesda, Maryland, on November 12, 2008. The group of physicians, nurses, diabetes educators, and engineers from across the United States discussed safety issues in insulin pump therapy and recommended adjustments to current insulin pump design and use to enhance overall safety. The meeting discussed safety issues in the context of pump operation; software; hardware; physical structure; electrical, biological, and chemical considerations; use; and environment from engineering, medical, nursing, and pump/user perspectives. There was consensus among meeting participants that insulin pump designs have made great progress in improving the quality of life of people with diabetes, but much more remains to be done. PMID:20307411

Anaerobic Fungi: A Potential Source of Biological H2 in the Oceanic Crust

PubMed Central

Ivarsson, Magnus; Schnürer, Anna; Bengtson, Stefan; Neubeck, Anna

2016-01-01

The recent recognition of fungi in the oceanic igneous crust challenges the understanding of this environment as being exclusively prokaryotic and forces reconsiderations of the ecology of the deep biosphere. Anoxic provinces in the igneous crust are abundant and increase with age and depth of the crust. The presence of anaerobic fungi in deep-sea sediments and on the seafloor introduces a type of organism with attributes of geobiological significance not previously accounted for. Anaerobic fungi are best known from the rumen of herbivores where they produce molecular hydrogen, which in turn stimulates the growth of methanogens. The symbiotic cooperation between anaerobic fungi and methanogens in the rumen enhance the metabolic rate and growth of both. Methanogens and other hydrogen-consuming anaerobic archaea are known from subseafloor basalt; however, the abiotic production of hydrogen is questioned to be sufficient to support such communities. Alternatively, biologically produced hydrogen could serve as a continuous source. Here, we propose anaerobic fungi as a source of bioavailable hydrogen in the oceanic crust, and a close interplay between anaerobic fungi and hydrogen-driven prokaryotes. PMID:27433154

Seismic and Biological Sources of Ambient Ocean Sound

NASA Astrophysics Data System (ADS)

Freeman, Simon Eric

Sound is the most efficient radiation in the ocean. Sounds of seismic and biological origin contain information regarding the underlying processes that created them. A single hydrophone records summary time-frequency information from the volume within acoustic range. Beamforming using a hydrophone array additionally produces azimuthal estimates of sound sources. A two-dimensional array and acoustic focusing produce an unambiguous two-dimensional `image' of sources. This dissertation describes the application of these techniques in three cases. The first utilizes hydrophone arrays to investigate T-phases (water-borne seismic waves) in the Philippine Sea. Ninety T-phases were recorded over a 12-day period, implying a greater number of seismic events occur than are detected by terrestrial seismic monitoring in the region. Observation of an azimuthally migrating T-phase suggests that reverberation of such sounds from bathymetric features can occur over megameter scales. In the second case, single hydrophone recordings from coral reefs in the Line Islands archipelago reveal that local ambient reef sound is spectrally similar to sounds produced by small, hard-shelled benthic invertebrates in captivity. Time-lapse photography of the reef reveals an increase in benthic invertebrate activity at sundown, consistent with an increase in sound level. The dominant acoustic phenomenon on these reefs may thus originate from the interaction between a large number of small invertebrates and the substrate. Such sounds could be used to take census of hard-shelled benthic invertebrates that are otherwise extremely difficult to survey. A two-dimensional `map' of sound production over a coral reef in the Hawaiian Islands was obtained using two-dimensional hydrophone array in the third case. Heterogeneously distributed bio-acoustic sources were generally co-located with rocky reef areas. Acoustically dominant snapping shrimp were largely restricted to one location within the area surveyed

Biomass changes and trophic amplification of plankton in a warmer ocean.

PubMed

Chust, Guillem; Allen, J Icarus; Bopp, Laurent; Schrum, Corinna; Holt, Jason; Tsiaras, Kostas; Zavatarelli, Marco; Chifflet, Marina; Cannaby, Heather; Dadou, Isabelle; Daewel, Ute; Wakelin, Sarah L; Machu, Eric; Pushpadas, Dhanya; Butenschon, Momme; Artioli, Yuri; Petihakis, George; Smith, Chris; Garçon, Veronique; Goubanova, Katerina; Le Vu, Briac; Fach, Bettina A; Salihoglu, Baris; Clementi, Emanuela; Irigoien, Xabier

2014-07-01

Ocean warming can modify the ecophysiology and distribution of marine organisms, and relationships between species, with nonlinear interactions between ecosystem components potentially resulting in trophic amplification. Trophic amplification (or attenuation) describe the propagation of a hydroclimatic signal up the food web, causing magnification (or depression) of biomass values along one or more trophic pathways. We have employed 3-D coupled physical-biogeochemical models to explore ecosystem responses to climate change with a focus on trophic amplification. The response of phytoplankton and zooplankton to global climate-change projections, carried out with the IPSL Earth System Model by the end of the century, is analysed at global and regional basis, including European seas (NE Atlantic, Barents Sea, Baltic Sea, Black Sea, Bay of Biscay, Adriatic Sea, Aegean Sea) and the Eastern Boundary Upwelling System (Benguela). Results indicate that globally and in Atlantic Margin and North Sea, increased ocean stratification causes primary production and zooplankton biomass to decrease in response to a warming climate, whilst in the Barents, Baltic and Black Seas, primary production and zooplankton biomass increase. Projected warming characterized by an increase in sea surface temperature of 2.29 ± 0.05 °C leads to a reduction in zooplankton and phytoplankton biomasses of 11% and 6%, respectively. This suggests negative amplification of climate driven modifications of trophic level biomass through bottom-up control, leading to a reduced capacity of oceans to regulate climate through the biological carbon pump. Simulations suggest negative amplification is the dominant response across 47% of the ocean surface and prevails in the tropical oceans; whilst positive trophic amplification prevails in the Arctic and Antarctic oceans. Trophic attenuation is projected in temperate seas. Uncertainties in ocean plankton projections, associated to the use of single global and

Global assessment of ocean carbon export by combining satellite observations and food-web models

NASA Astrophysics Data System (ADS)

Siegel, D. A.; Buesseler, K. O.; Doney, S. C.; Sailley, S. F.; Behrenfeld, M. J.; Boyd, P. W.

2014-03-01

The export of organic carbon from the surface ocean by sinking particles is an important, yet highly uncertain, component of the global carbon cycle. Here we introduce a mechanistic assessment of the global ocean carbon export using satellite observations, including determinations of net primary production and the slope of the particle size spectrum, to drive a food-web model that estimates the production of sinking zooplankton feces and algal aggregates comprising the sinking particle flux at the base of the euphotic zone. The synthesis of observations and models reveals fundamentally different and ecologically consistent regional-scale patterns in export and export efficiency not found in previous global carbon export assessments. The model reproduces regional-scale particle export field observations and predicts a climatological mean global carbon export from the euphotic zone of 6 Pg C yr-1. Global export estimates show small variation (typically < 10%) to factor of 2 changes in model parameter values. The model is also robust to the choices of the satellite data products used and enables interannual changes to be quantified. The present synthesis of observations and models provides a path for quantifying the ocean's biological pump.

A marine secondary producer respires and feeds more in a high CO2 ocean.

PubMed

Li, Wei; Gao, Kunshan

2012-04-01

Climate change mediates marine chemical and physical environments and therefore influences marine organisms. While increasing atmospheric CO(2) level and associated ocean acidification has been predicted to stimulate marine primary productivity and may affect community structure, the processes that impact food chain and biological CO(2) pump are less documented. We hypothesized that copepods, as the secondary marine producer, may respond to future changes in seawater carbonate chemistry associated with ocean acidification due to increasing atmospheric CO(2) concentration. Here, we show that the copepod, Centropages tenuiremis, was able to perceive the chemical changes in seawater induced under elevated CO(2) concentration (>1700 μatm, pH<7.60) with avoidance strategy. The copepod's respiration increased at the elevated CO(2) (1000 μatm), associated acidity (pH 7.83) and its feeding rates also increased correspondingly, except for the initial acclimating period, when it fed less. Our results imply that marine secondary producers increase their respiration and feeding rate in response to ocean acidification to balance the energy cost against increased acidity and CO(2) concentration. Copyright © 2012 Elsevier Ltd. All rights reserved.

Towards an optofluidic pump?

NASA Astrophysics Data System (ADS)

Emile, Olivier; Emile, Janine

2016-12-01

Most of the vibrating mechanisms of optofluidic systems are based on local heating of membranes that induces liquid flow.We report here a new type of diaphragm pump in a liquid film based on the optical radiation pressure force. We modulate a low power laser that generates, at resonance, a symmetric vibration of a free standing soap film. The film lifetime strongly varies from 56 s at low power (2 mW) to 2 s at higher power (70 mW). Since the laser beam only acts mechanically on the interfaces, such a pump could be easily implemented on delicate microequipment on chips or in biological systems.

The 1994 Arctic Ocean Section. The First Major Scientific Crossing of the Arctic Ocean,

DTIC Science & Technology

1996-09-01

contribute to the international effort to better understand the role of the Arctic Ocean in the global carbon cycle and climate change. Summar...Barium Distributions in the Arctic Ocean ? ........................ 32 Biology and the Carbon Cycle Cycling of Organic Carbon in the Central Arctic...of Heterotrophic Bacteria and Protists in the Arctic Ocean Carbon Cycle............. 40

Ocean thermal gradient hydraulic power plant.

PubMed

Beck, E J

1975-07-25

Solar energy stored in the oceans may be used to generate power by exploiting ploiting thermal gradients. A proposed open-cycle system uses low-pressure steam to elevate vate water, which is then run through a hydraulic turbine to generate power. The device is analogous to an air lift pump.

Slow science: the value of long ocean biogeochemistry records

PubMed Central

Henson, Stephanie A.

2014-01-01

Sustained observations (SOs) have provided invaluable information on the ocean's biology and biogeochemistry for over 50 years. They continue to play a vital role in elucidating the functioning of the marine ecosystem, particularly in the light of ongoing climate change. Repeated, consistent observations have provided the opportunity to resolve temporal and/or spatial variability in ocean biogeochemistry, which has driven exploration of the factors controlling biological parameters and processes. Here, I highlight some of the key breakthroughs in biological oceanography that have been enabled by SOs, which include areas such as trophic dynamics, understanding variability, improved biogeochemical models and the role of ocean biology in the global carbon cycle. In the near future, SOs are poised to make progress on several fronts, including detecting climate change effects on ocean biogeochemistry, high-resolution observations of physical–biological interactions and greater observational capability in both the mesopelagic zone and harsh environments, such as the Arctic. We are now entering a new era for biological SOs, one in which our motivations have evolved from the need to acquire basic understanding of the ocean's state and variability, to a need to understand ocean biogeochemistry in the context of increasing pressure in the form of climate change, overfishing and eutrophication. PMID:25157192

Slow science: the value of long ocean biogeochemistry records.

PubMed

Henson, Stephanie A

2014-09-28

Sustained observations (SOs) have provided invaluable information on the ocean's biology and biogeochemistry for over 50 years. They continue to play a vital role in elucidating the functioning of the marine ecosystem, particularly in the light of ongoing climate change. Repeated, consistent observations have provided the opportunity to resolve temporal and/or spatial variability in ocean biogeochemistry, which has driven exploration of the factors controlling biological parameters and processes. Here, I highlight some of the key breakthroughs in biological oceanography that have been enabled by SOs, which include areas such as trophic dynamics, understanding variability, improved biogeochemical models and the role of ocean biology in the global carbon cycle. In the near future, SOs are poised to make progress on several fronts, including detecting climate change effects on ocean biogeochemistry, high-resolution observations of physical-biological interactions and greater observational capability in both the mesopelagic zone and harsh environments, such as the Arctic. We are now entering a new era for biological SOs, one in which our motivations have evolved from the need to acquire basic understanding of the ocean's state and variability, to a need to understand ocean biogeochemistry in the context of increasing pressure in the form of climate change, overfishing and eutrophication.

Natural Air-Sea Flux of CO2 in Simulations of the NASA-GISS Climate Model: Sensitivity to the Physical Ocean Model Formulation

NASA Technical Reports Server (NTRS)

Romanou, A.; Gregg, Watson W.; Romanski, J.; Kelley, M.; Bleck, R.; Healy, R.; Nazarenko, L.; Russell, G.; Schmidt, G. A.; Sun, S.;

Role of ocean isopycnal mixing in setting the uptake of anthropogenic carbon

NASA Astrophysics Data System (ADS)

Gnanadesikan, A.; Pradal, M. A. S.; Abernathey, R. P.

2014-12-01

The magnitude of the isopycnal stirring coefficient ARedi is poorly constrained from data and varies greatly across Earth System Models. This paper documents the impact of such uncertainty on the oceanic carbon cycle. We compare six spatial representations of ARedi. Four constant values (400, 800, 1200 and 2400 m2/s) are used to explore the difference between using the low values found in many models and the higher values seen in observational estimates. Models are also run with two spatially dependent values of ARedi based on altimetry, one which captures the fully two-dimensional structure of the mixing coefficient, the other of which looks at the zonally averaged structure alone. Under global warming significant changes are seen in the biological pump in convective regions, but these changes are largely locally compensated by changes in preformed DIC. Instead, differences in anthropogenic uptake of carbon are largely centered in the tropics, and can be well described in terms of a relatively simple diffusive approximation. Using ideal age as a tracer can give insight into the expected behavior of the models. The rate of oceanic mixing represents a quantitatively significant uncertainty in future projections of the global carbon cycle, amounting to about 20% of the oceanic uptake.

Sea surface microlayers: A unified physicochemical and biological perspective of the air-ocean interface

NASA Astrophysics Data System (ADS)

Cunliffe, Michael; Engel, Anja; Frka, Sanja; Gašparović, Blaženka; Guitart, Carlos; Murrell, J. Colin; Salter, Matthew; Stolle, Christian; Upstill-Goddard, Robert; Wurl, Oliver

2013-02-01

The sea surface microlayer (SML) covers more than 70% of the Earth's surface and is the boundary layer interface between the ocean and the atmosphere. This important biogeochemical and ecological system is critical to a diverse range of Earth system processes, including the synthesis, transformation and cycling of organic material, and the air-sea exchange of gases, particles and aerosols. In this review we discuss the SML paradigm, taking into account physicochemical and biological characteristics that define SML structure and function. These include enrichments in biogenic molecules such as carbohydrates, lipids and proteinaceous material that contribute to organic carbon cycling, distinct microbial assemblages that participate in air-sea gas exchange, the generation of climate-active aerosols and the accumulation of anthropogenic pollutants with potentially serious implications for the health of the ocean. Characteristically large physical, chemical and biological gradients thus separate the SML from the underlying water and the available evidence implies that the SML retains its integrity over wide ranging environmental conditions. In support of this we present previously unpublished time series data on bacterioneuston composition and SML surfactant activity immediately following physical SML disruption; these imply timescales of the order of minutes for the reestablishment of the SML following disruption. A progressive approach to understanding the SML and hence its role in global biogeochemistry can only be achieved by considering as an integrated whole, all the key components of this complex environment.

Seasonality of biological and physical controls on surface ocean CO2 from hourly observations at the Southern Ocean Time Series site south of Australia.

NASA Astrophysics Data System (ADS)

Shadwick, E. H.; Trull, T. W.; Tilbrook, B. D.; Sutton, A.; Sabine, C. L.

2016-02-01

The Subantarctic Zone (SAZ), which covers the northern half of the Southern Ocean between the Subtropical and Subantarctic Fronts is important for air-sea CO2 exchange, ventilation of the lower thermocline, and nutrient supply for global ocean productivity. The first high-resolution autonomous observations of mixed layer CO2 partial pressure (pCO2) and hydrographic properties in the SAZ covering a full annual cycle will be presented. The annual cycle of pCO2 is decomposed into physical and biological drivers: after the summer biological pCO2 depletion (driven by an annual net community production of 2.45±1.47 mol C m-2 yr-1), the return to near atmospheric equilibrium proceeds slowly, driven by entrainment in early autumn when mixed layers deepen from <100 to 200m, but only achieving full equilibration in late winter/early spring as respiration completes the annual cycle. The shutdown of winter convection and associated mixed layer shoaling proceeds intermittently, appearing to frustrate the initiation of production. Horizontal processes, identified from salinity anomalies, are associated with biological pCO2 signatures, but with differing impacts in winter (when they reflect far-field variations in dissolved inorganic carbon and/or biomass) and summer (when they suggest promotion of local production by the relief of silicic acid or iron limitation). These results provide clarity on SAZ seasonal carbon cycling and demonstrate that the magnitude of the annual pCO2 cycle is twice as large as that in the subarctic high-nutrient, low-chlorophyll waters, which can inform the selection of optimal global models in this region.

The Southern Ocean as a constraint to reduce uncertainty in future ocean carbon sinks

DOE PAGES

Kessler, A.; Tjiputra, J.

2016-04-07

Earth system model (ESM) simulations exhibit large biases compares to observation-based estimates of the present ocean CO 2 sink. The inter-model spread in projections increases nearly 2-fold by the end of the 21st century and therefore contributes significantly to the uncertainty of future climate projections. In this study, the Southern Ocean (SO) is shown to be one of the hot-spot regions for future uptake of anthropogenic CO 2, characterized by both the solubility pump and biologically mediated carbon drawdown in the spring and summer. Here, we show, by analyzing a suite of fully interactive ESMs simulations from the Coupled Model Intercomparisonmore » Project phase 5 (CMIP5) over the 21st century under the high-CO 2 Representative Concentration Pathway (RCP) 8.5 scenario, that the SO is the only region where the atmospheric CO 2 uptake rate continues to increase toward the end of the 21st century. Furthermore, our study discovers a strong inter-model link between the contemporary CO 2 uptake in the Southern Ocean and the projected global cumulated uptake over the 21st century. This strong correlation suggests that models with low (high) carbon uptake rate in the contemporary SO tend to simulate low (high) uptake rate in the future. None the less, our analysis also shows that none of the models fully capture the observed biophysical mechanisms governing the CO 2 fluxes in the SO. The inter-model spread for the contemporary CO 2 uptake in the Southern Ocean is attributed to the variations in the simulated seasonal cycle of surface pCO 2. Two groups of model behavior have been identified. The first one simulates anomalously strong SO carbon uptake, generally due to both too strong a net primary production and too low a surface pCO 2 in December–January. The second group simulates an opposite CO 2 flux seasonal phase, which is driven mainly by the bias in the sea surface temperature variability. Furthermore, we show that these biases are persistent

The Southern Ocean as a constraint to reduce uncertainty in future ocean carbon sinks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kessler, A.; Tjiputra, J.

Earth system model (ESM) simulations exhibit large biases compares to observation-based estimates of the present ocean CO 2 sink. The inter-model spread in projections increases nearly 2-fold by the end of the 21st century and therefore contributes significantly to the uncertainty of future climate projections. In this study, the Southern Ocean (SO) is shown to be one of the hot-spot regions for future uptake of anthropogenic CO 2, characterized by both the solubility pump and biologically mediated carbon drawdown in the spring and summer. Here, we show, by analyzing a suite of fully interactive ESMs simulations from the Coupled Model Intercomparisonmore » Project phase 5 (CMIP5) over the 21st century under the high-CO 2 Representative Concentration Pathway (RCP) 8.5 scenario, that the SO is the only region where the atmospheric CO 2 uptake rate continues to increase toward the end of the 21st century. Furthermore, our study discovers a strong inter-model link between the contemporary CO 2 uptake in the Southern Ocean and the projected global cumulated uptake over the 21st century. This strong correlation suggests that models with low (high) carbon uptake rate in the contemporary SO tend to simulate low (high) uptake rate in the future. None the less, our analysis also shows that none of the models fully capture the observed biophysical mechanisms governing the CO 2 fluxes in the SO. The inter-model spread for the contemporary CO 2 uptake in the Southern Ocean is attributed to the variations in the simulated seasonal cycle of surface pCO 2. Two groups of model behavior have been identified. The first one simulates anomalously strong SO carbon uptake, generally due to both too strong a net primary production and too low a surface pCO 2 in December–January. The second group simulates an opposite CO 2 flux seasonal phase, which is driven mainly by the bias in the sea surface temperature variability. Furthermore, we show that these biases are persistent

Enhanced chemical weathering as a geoengineering strategy to reduce atmospheric carbon dioxide, supply nutrients, and mitigate ocean acidification

NASA Astrophysics Data System (ADS)

Hartmann, Jens; West, A. Joshua; Renforth, Phil; Köhler, Peter; De La Rocha, Christina L.; Wolf-Gladrow, Dieter A.; Dürr, Hans H.; Scheffran, Jürgen

2013-04-01

weathering is an integral part of both the rock and carbon cycles and is being affected by changes in land use, particularly as a result of agricultural practices such as tilling, mineral fertilization, or liming to adjust soil pH. These human activities have already altered the terrestrial chemical cycles and land-ocean flux of major elements, although the extent remains difficult to quantify. When deployed on a grand scale, Enhanced Weathering (a form of mineral fertilization), the application of finely ground minerals over the land surface, could be used to remove CO2 from the atmosphere. The release of cations during the dissolution of such silicate minerals would convert dissolved CO2 to bicarbonate, increasing the alkalinity and pH of natural waters. Some products of mineral dissolution would precipitate in soils or be taken up by ecosystems, but a significant portion would be transported to the coastal zone and the open ocean, where the increase in alkalinity would partially counteract "ocean acidification" associated with the current marked increase in atmospheric CO2. Other elements released during this mineral dissolution, like Si, P, or K, could stimulate biological productivity, further helping to remove CO2 from the atmosphere. On land, the terrestrial carbon pool would likely increase in response to Enhanced Weathering in areas where ecosystem growth rates are currently limited by one of the nutrients that would be released during mineral dissolution. In the ocean, the biological carbon pumps (which export organic matter and CaCO3 to the deep ocean) may be altered by the resulting influx of nutrients and alkalinity to the ocean. This review merges current interdisciplinary knowledge about Enhanced Weathering, the processes involved, and the applicability as well as some of the consequences and risks of applying the method.

Greater Role of Geostrophic Currents on Ekman Dynamics in the Western Arctic Ocean as a Mechanism for Beaufort Gyre Stabilization

NASA Astrophysics Data System (ADS)

Steele, M.; Zhong, W.; Zhang, J.; Zhao, J.

2017-12-01

Seven different methods, with and without including geostrophic currents, were used to explore Ekman dynamics in the western Arctic Ocean for the period 1992-2014. Results show that surface geostrophic currents have been increasing and are much stronger than Ekman layer velocities in recent years (2003-2014) when the oceanic Beaufort Gyre (BG) is spinning up in the region. The new methods that include geostrophic currents result in more realistic Ekman pumping velocities than a previous iterative method that does not consider geostrophic currents and therefore overestimates Ekman pumping velocities by up to 52% in the central area of the BG over the period 2003-2014. When the BG is spinning up as seen in recent years, geostrophic currents become stronger, which tend to modify the ice-ocean stress and to cause an Ekman divergence that counteracts wind-driven Ekman convergence in the Canada Basin. This is a mechanism we have identified to play an important and growing role in stabilizing the Ekman convergence and therefore the BG in recent years. This mechanism may be used to explain three scenarios that describe the interplay of changes in wind forcing, sea ice motion, and geostrophic currents that control the variability of the Ekman dynamics in the central BG during 1992-2014. Results also reveal several upwelling regions in the southern and northern Canada Basin and the Chukchi Abyssal Plain which may plays a significant role in biological processes in these regions.

Greater Role of Geostrophic Currents in Ekman Dynamics in the Western Arctic Ocean as a Mechanism for Beaufort Gyre Stabilization

NASA Astrophysics Data System (ADS)

Zhong, Wenli; Steele, Michael; Zhang, Jinlun; Zhao, Jinping

2018-01-01

Seven different methods, with and without including geostrophic currents, were used to explore Ekman dynamics in the western Arctic Ocean for the period 1992-2014. Results show that surface geostrophic currents have been increasing and are much stronger than Ekman layer velocities in recent years (2003-2014) when the oceanic Beaufort Gyre (BG) is spinning up in the region. The new methods that include geostrophic currents result in more realistic Ekman pumping velocities than a previous iterative method that does not consider geostrophic currents and therefore overestimates Ekman pumping velocities by up to 52% in the central area of the BG over the period 2003-2014. When the BG is spinning up as seen in recent years, geostrophic currents become stronger, which tend to modify the ice-ocean stress and moderate the wind-driven Ekman convergence in the Canada Basin. This is a mechanism we have identified to play an important and growing role in stabilizing the Ekman convergence and therefore the BG in recent years. This mechanism may be used to explain three scenarios that describe the interplay of changes in wind forcing, sea ice motion, and geostrophic currents that control the variability of the Ekman dynamics in the central BG during 1992-2014. Results also reveal several upwelling regions in the southern and northern Canada Basin and the Chukchi Abyssal Plain which may play a significant role in physical and biological processes in these regions.

Protons and how they are transported by proton pumps.

PubMed

Buch-Pedersen, M J; Pedersen, B P; Veierskov, B; Nissen, P; Palmgren, M G

2009-01-01

The very high mobility of protons in aqueous solutions demands special features of membrane proton transporters to sustain efficient yet regulated proton transport across biological membranes. By the use of the chemical energy of ATP, plasma-membrane-embedded ATPases extrude protons from cells of plants and fungi to generate electrochemical proton gradients. The recently published crystal structure of a plasma membrane H(+)-ATPase contributes to our knowledge about the mechanism of these essential enzymes. Taking the biochemical and structural data together, we are now able to describe the basic molecular components that allow the plasma membrane proton H(+)-ATPase to carry out proton transport against large membrane potentials. When divergent proton pumps such as the plasma membrane H(+)-ATPase, bacteriorhodopsin, and F(O)F(1) ATP synthase are compared, unifying mechanistic premises for biological proton pumps emerge. Most notably, the minimal pumping apparatus of all pumps consists of a central proton acceptor/donor, a positively charged residue to control pK(a) changes of the proton acceptor/donor, and bound water molecules to facilitate rapid proton transport along proton wires.

New perspectives in ocean acidification research: editor's introduction to the special feature on ocean acidification.

PubMed

Munday, Philip L

2017-09-01

Ocean acidification, caused by the uptake of additional carbon dioxide (CO 2 ) from the atmosphere, will have far-reaching impacts on marine ecosystems (Gattuso & Hansson 2011 Ocean acidification Oxford University Press). The predicted changes in ocean chemistry will affect whole biological communities and will occur within the context of global warming and other anthropogenic stressors; yet much of the biological research conducted to date has tested the short-term responses of single species to ocean acidification conditions alone. While an important starting point, these studies may have limited predictive power because they do not account for possible interactive effects of multiple climate change drivers or for ecological interactions with other species. Furthermore, few studies have considered variation in responses among populations or the evolutionary potential within populations. Therefore, our knowledge about the potential for marine organisms to adapt to ocean acidification is extremely limited. In 2015, two of the pioneers in the field, Ulf Riebesell and Jean-Pierre Gattuso, noted that to move forward as a field of study, future research needed to address critical knowledge gaps in three major areas: (i) multiple environmental drivers, (ii) ecological interactions and (iii) acclimation and adaptation (Riebesell and Gattuso 2015 Nat. Clim. Change 5 , 12-14 (doi:10.1038/nclimate2456)). In May 2016, more than 350 researchers, students and stakeholders met at the 4th International Symposium on the Ocean in a High-CO 2 World in Hobart, Tasmania, to discuss the latest advances in understanding ocean acidification and its biological consequences. Many of the papers presented at the symposium reflected this shift in focus from short-term, single species and single stressor experiments towards multi-stressor and multispecies experiments that address knowledge gaps about the ecological impacts of ocean acidification on marine communities. The nine papers in this

A handy liquid metal based electroosmotic flow pump.

PubMed

Gao, Meng; Gui, Lin

2014-06-07

A room temperature liquid metal based electroosmotic flow (EOF) pump has been proposed in this work. This low-cost EOF pump is convenient for both fabrication and integration. It utilizes polydimethylsiloxane (PDMS) microchannels filled with the liquid-metal as non-contact pump electrodes. The electrode channels are fabricated symmetrically to both sides of the pumping channel, having no contact with the pumping channel. To test the pumping performance of the EOF pump, the mean flow velocities of the fluid (DI water) in the EOF pumps were experimentally measured by tracing the fluorescent microparticles in the flow. To provide guidance for designing a low voltage EOF pump, parametric studies on dimensions of the electrode and pumping channels were performed in this work. According to the experimental results, the pumping speed can reach 5.93 μm s(-1) at a driving voltage of only 1.6 V, when the gap between the electrode and the pumping channel is 20 μm. Injecting a room temperature liquid metal into microchannels can provide a simple, rapid, low-cost but accurately self-aligned way to fabricate microelectrodes for EOF pumps, which is a promising method to achieve the miniaturization and integration of the EOF pump in microfluidic systems. The non-contact liquid electrodes have no influence on the fluid in the pumping channel when pumping, reducing Joule heat generation and preventing gas bubble formation at the surface of electrodes. The pump has great potential to drive a wide range of fluids, such as drug reagents, cell suspensions and biological macromolecule solutions.

The Vertical Transport in the Ocean: a Pump Driven by Meso and Submesoscale Structures

NASA Astrophysics Data System (ADS)

Rosso, I.; Hogg, A. M.; Strutton, P. G.; Kiss, A. E.

2012-04-01

The upper ocean can be considered as a vehicle for the exchange of gases between air and the deep ocean. Furthermore, the transport of nutrients through the mixed layer occurs via a combination of biogeochemical and physical pumps; both of these mechanisms play a fundamental role in the carbon cycle. In the surface layer phytoplankton convert carbon dioxide into organic compounds using nutrients and light. Nutrients, which are depleted at the surface, can be transported into the mixed layer by vertical motion; recently, it has been discovered that this vertical transport is more often associated with submesoscale fronts of O(10) km (rather than inside mesoscale structures, of O(100) km, like eddies). At the submesoscale fronts, rates of O(100) m day-1 can emerge, particularly high compared to values of 10 m/day found at the mesoscales [M. Lèvy, et al. J. Mar. Res., 2001]. At this fine scale, the vertical transport of nutrients is highly effective, upwelling waters from the depth rich of nutrients and downwelling depleted waters from the surface. The fine-scale vertical transport mechanism has recently become of great interest, though is not completely understood. We investigate the dynamics and the transport of tracers at the meso and sub-mesoscales by running numerical simulations with a domain of 1024 km x 512 km x 1600 m, at 3 different resolutions: 8 km, 4km and 1km. We use the MIT general circulation model with free surface, linear bottom drag and free slip condition at the north and south walls. Non-linear 3rd order advection scheme and biharmonic viscosity are applied. Furthermore, the fluid is forced by a constant zonal wind stress. The flow is zonally periodic and presents an idealized topography. We started from an initial vertical stratification and run the model to reach an equilibrium flow state. A passive tracer is released after the equilibrium is reached. We investigate how the fine scales are affecting the rate of vertical transport and the

Light fields in the ocean

NASA Technical Reports Server (NTRS)

Pelevin, V. N.; Kozlyaninov, M. V.

1981-01-01

The problem of light fields in the ocean is in basic ocean optics. Twenty-six separate studies discuss: (1) the field of solar radiation in the ocean; (2) stationary and nonstationary light fields created in the sea by artificial sources; and (3) the use of optical methods to study biological and hydrodynamic characteristics of the sea.

Polaro–cryptic mirror of the lookdown as a biological model for open ocean camouflage

PubMed Central

Brady, Parrish C.; Travis, Kort A.; Maginnis, Tara; Cummings, Molly E.

2013-01-01

With no object to hide behind in 3D space, the open ocean represents a challenging environment for camouflage. Conventional strategies for reflective crypsis (e.g., standard mirror) are effective against axially symmetric radiance fields associated with high solar altitudes, yet ineffective against asymmetric polarized radiance fields associated with low solar inclinations. Here we identify a biological model for polaro–crypsis. We measured the surface-reflectance Mueller matrix of live open ocean fish (lookdown, Selene vomer) and seagrass-dwelling fish (pinfish, Lagodon rhomboides) using polarization-imaging and modeling polarization camouflage for the open ocean. Lookdowns occupy the minimization basin of our polarization-contrast space, while pinfish and standard mirror measurements exhibit higher contrast values than optimal. The lookdown reflective strategy achieves significant gains in polaro–crypsis (up to 80%) in comparison with nonpolarization sensitive strategies, such as a vertical mirror. Lookdowns achieve polaro–crypsis across solar altitudes by varying reflective properties (described by 16 Mueller matrix elements mij) with incident illumination. Lookdowns preserve reflected polarization aligned with principle axes (dorsal–ventral and anterior–posterior, m22 = 0.64), while randomizing incident polarization 45° from principle axes (m33 = –0.05). These reflectance properties allow lookdowns to reflect the uniform degree and angle of polarization associated with high-noon conditions due to alignment of the principle axes and the sun, and reflect a more complex polarization pattern at asymmetrical light fields associated with lower solar elevations. Our results suggest that polaro–cryptic strategies vary by habitat, and require context-specific depolarization and angle alteration for effective concealment in the complex open ocean environment. PMID:23716701

Connections: Ocean Environments. Unit Grade 5.

ERIC Educational Resources Information Center

Ney, Catherine R.

Ocean Environments for Grade 5 is a 12-week interdisciplinary ocean environmental unit designed for teachers to use with their students. The unit emphasizes investigation and understanding of our ocean environments, including their geological, physical, and biological characteristics. It also stresses awareness of public policy decisions related…

Northerly surface winds over the eastern North Pacific Ocean in spring and summer

USGS Publications Warehouse

Taylor, S.V.; Cayan, D.R.; Graham, N.E.; Georgakakos, K.P.

2008-01-01

Persistent spring and summer northerly surface winds are the defining climatological feature of the western coast of North America, especially south of the Oregon coast. Northerly surface winds are important for upwelling and a vast array of other biological, oceanic, and atmospheric processes. Intermittence in northerly coastal surface wind is characterized and wind events are quantitatively defined using coastal buoy data south of Cape Mendocino on the northern California coast. The defined wind events are then used as a basis for composites in order to explain the spatial evolution of various atmospheric and oceanic processes. Wind events involve large-scale changes in the three-dimensional atmospheric circulation including the eastern North Pacific subtropical anticyclone and southeast trade winds. Composites of QSCAT satellite scatterometer wind estimates from 1999 to 2005 based on a single coastal buoy indicate that wind events typically last 72-96 h and result in anomalies in surface wind and Ekman pumping that extend over 1000 kin from the west coast of North America. It may be useful to consider ocean circulation and dependent ecosystem dynamics and the distribution of temperature, moisture, and aerosols in the atmospheric boundary layer in the context of wind events defined herein. Copyright 2008 by the American Geophysical Union.

Attenuation of sinking particulate organic carbon flux through the mesopelagic ocean

PubMed Central

Marsay, Chris M.; Sanders, Richard J.; Henson, Stephanie A.; Pabortsava, Katsiaryna; Achterberg, Eric P.; Lampitt, Richard S.

2015-01-01

The biological carbon pump, which transports particulate organic carbon (POC) from the surface to the deep ocean, plays an important role in regulating atmospheric carbon dioxide (CO2) concentrations. We know very little about geographical variability in the remineralization depth of this sinking material and less about what controls such variability. Here we present previously unpublished profiles of mesopelagic POC flux derived from neutrally buoyant sediment traps deployed in the North Atlantic, from which we calculate the remineralization length scale for each site. Combining these results with corresponding data from the North Pacific, we show that the observed variability in attenuation of vertical POC flux can largely be explained by temperature, with shallower remineralization occurring in warmer waters. This is seemingly inconsistent with conclusions drawn from earlier analyses of deep-sea sediment trap and export flux data, which suggest lowest transfer efficiency at high latitudes. However, the two patterns can be reconciled by considering relatively intense remineralization of a labile fraction of material in warm waters, followed by efficient downward transfer of the remaining refractory fraction, while in cold environments, a larger labile fraction undergoes slower remineralization that continues over a longer length scale. Based on the observed relationship, future increases in ocean temperature will likely lead to shallower remineralization of POC and hence reduced storage of CO2 by the ocean. PMID:25561526

Biological Oceanography

NASA Technical Reports Server (NTRS)

Abbott, M. R.

1984-01-01

Within the framework of global biogeochemical cycles and ocean productivity, there are two areas that will be of particular interest to biological oceanography in the 1990s. The first is the mapping in space time of the biomass and productivity of phytoplankton in the world ocean. The second area is the coupling of biological and physical processes as it affects the distribution and growth rate of phytoplankton biomass. Certainly other areas will be of interest to biological oceanographers, but these two areas are amenable to observations from satellites. Temporal and spatial variability is a regular feature of marine ecosystems. The temporal and spatial variability of phytoplankton biomass and productivity which is ubiquitous at all time and space scales in the ocean must be characterized. Remote sensing from satellites addresses these problems with global observations of mesocale (2 to 20 days, 10 to 200 km) features over a long period of time.

Regional Ocean Data Assimilation

NASA Astrophysics Data System (ADS)

Edwards, Christopher A.; Moore, Andrew M.; Hoteit, Ibrahim; Cornuelle, Bruce D.

2015-01-01

This article reviews the past 15 years of developments in regional ocean data assimilation. A variety of scientific, management, and safety-related objectives motivate marine scientists to characterize many ocean environments, including coastal regions. As in weather prediction, the accurate representation of physical, chemical, and/or biological properties in the ocean is challenging. Models and observations alone provide imperfect representations of the ocean state, but together they can offer improved estimates. Variational and sequential methods are among the most widely used in regional ocean systems, and there have been exciting recent advances in ensemble and four-dimensional variational approaches. These techniques are increasingly being tested and adapted for biogeochemical applications.

Regional ocean data assimilation.

PubMed

Edwards, Christopher A; Moore, Andrew M; Hoteit, Ibrahim; Cornuelle, Bruce D

2015-01-01

This article reviews the past 15 years of developments in regional ocean data assimilation. A variety of scientific, management, and safety-related objectives motivate marine scientists to characterize many ocean environments, including coastal regions. As in weather prediction, the accurate representation of physical, chemical, and/or biological properties in the ocean is challenging. Models and observations alone provide imperfect representations of the ocean state, but together they can offer improved estimates. Variational and sequential methods are among the most widely used in regional ocean systems, and there have been exciting recent advances in ensemble and four-dimensional variational approaches. These techniques are increasingly being tested and adapted for biogeochemical applications.

Impact of atmospheric and terrestrial CO2 feedbacks on fertilization-induced marine carbon uptake

NASA Astrophysics Data System (ADS)

Oschlies, A.

2009-04-01

The sensitivity of oceanic CO2 uptake to alterations in the marine biological carbon pump, such as brought about by natural or purposeful ocean fertilization, has repeatedly been investigated by studies employing numerical biogeochemical ocean models. It is shown here that the results of such ocean-centered studies are very sensitive to the assumption made about the response of the carbon reservoirs on the atmospheric side of the sea surface. Assumptions made include prescribed atmospheric pCO2, an interactive atmospheric CO2 pool exchanging carbon with the ocean but not with the terrestrial biosphere, and an interactive atmosphere that exchanges carbon with both oceanic and terrestrial carbon pools. The impact of these assumptions on simulated annual to millennial oceanic carbon uptake is investigated for a hypothetical increase in the C:N ratio of the biological pump and for an idealized enhancement of phytoplankton growth. Compared to simulations with interactive atmosphere, using prescribed atmospheric pCO2 overestimates the sensitivity of the oceanic CO2 uptake to changes in the biological pump, by about 2%, 25%, 100%, and >500% on annual, decadal, centennial, and millennial timescales, respectively. Adding an interactive terrestrial carbon pool to the atmosphere-ocean model system has a small effect on annual timescales, but increases the simulated fertilization-induced oceanic carbon uptake by about 4%, 50%, and 100% on decadal, centennial, and millennial timescales, respectively. On longer than decadal timescales, a substantial fraction of oceanic carbon uptake induced by natural or purposeful ocean fertilization may not come from the atmosphere but from the terrestrial biosphere.

Iron Resources and Oceanic Nutrients - Advancement of Global Environment Simulations (ironages)

NASA Astrophysics Data System (ADS)

de Baar, H. J. W.; Ironages Team

Iron limits productivity in 40 percent of the oceans, and is a co-limitation in the re- maining 60 percent of surface waters. Moreover the paradigm of a single factor limit- ing plankton blooms, is presently giving way to co-limitation by light, and the nutri- ents N, P, Si, and Fe. Primary production, export into the deep sea, and CO2 uptake from the atmosphere together form the 'biological pump' in Ocean Biogeochemi- cal Climate Models (OBCM's). Thus far OBCM's assume just one limiting nutrient (P) and one universal phytoplankton species, for deriving C budgets and CO2 ex- change with the atmosphere. New realistic OBCM's are being developed in IRON- AGES for budgeting and air/sea exchanges of both CO2 and DMS, implementing (1) co-limitation by 4 nutrients of 5 major taxonomic classes of phytoplankton in a nested plankton ecosystem model, (ii) DMS(P) pathways, (iii) global iron cycling, (iv) chem- ical forms of iron and (v) iron supply in surface waters from above by aerosols and from below out of reducing margin sediments. IRONAGES is a consortium of 12 Eu- ropean institutes coordinated by the Royal NIOZ.

Oceanic oxygenation events in the anoxic Ediacaran ocean.

PubMed

Sahoo, S K; Planavsky, N J; Jiang, G; Kendall, B; Owens, J D; Wang, X; Shi, X; Anbar, A D; Lyons, T W

2016-09-01

The ocean-atmosphere system is typically envisioned to have gone through a unidirectional oxygenation with significant oxygen increases in the earliest (ca. 635 Ma), middle (ca. 580 Ma), or late (ca. 560 Ma) Ediacaran Period. However, temporally discontinuous geochemical data and the patchy metazoan fossil record have been inadequate to chart the details of Ediacaran ocean oxygenation, raising fundamental debates about the timing of ocean oxygenation, its purported unidirectional rise, and its causal relationship, if any, with the evolution of early animal life. To better understand the Ediacaran ocean redox evolution, we have conducted a multi-proxy paleoredox study of a relatively continuous, deep-water section in South China that was paleogeographically connected with the open ocean. Iron speciation and pyrite morphology indicate locally euxinic (anoxic and sulfidic) environments throughout the Ediacaran in this section. In the same rocks, redox sensitive element enrichments and sulfur isotope data provide evidence for multiple oceanic oxygenation events (OOEs) in a predominantly anoxic global Ediacaran-early Cambrian ocean. This dynamic redox landscape contrasts with a recent view of a redox-static Ediacaran ocean without significant change in oxygen content. The duration of the Ediacaran OOEs may be comparable to those of the oceanic anoxic events (OAEs) in otherwise well-oxygenated Phanerozoic oceans. Anoxic events caused mass extinctions followed by fast recovery in biologically diversified Phanerozoic oceans. In contrast, oxygenation events in otherwise ecologically monotonous anoxic Ediacaran-early Cambrian oceans may have stimulated biotic innovations followed by prolonged evolutionary stasis. © 2016 John Wiley & Sons Ltd.

Time-gated real-time pump-probe imaging spectroscopy

NASA Astrophysics Data System (ADS)

Ferrari, Raffaele; D'Andrea, Cosimo; Bassi, Andrea; Valentini, Gianluca; Cubeddu, Rinaldo

2007-07-01

An experimental technique which allows one to perform pump-probe transient absorption spectroscopy in real-time is an important tool to study irreversible processes. This is particularly interesting in the case of biological samples which easily deteriorate upon exposure to light pulses, with the formation of permanent photoproducts and structural changes. In particular pump-probe spectroscopy can provide fundamental information for the design of optical chromophores. In this work a real-time pump-probe imaging spectroscopy system has been realized and we have explored the possibility to further reduce the number of laser pulses by using a time-gated camera. We believe that the use of a time-gated camera can provide an important step towards the final goal of pump-probe single shot spectroscopy.

A physicochemical framework for interpreting the biological calcification response to CO2-induced ocean acidification

NASA Astrophysics Data System (ADS)

Ries, J. B.

2011-12-01

Researchers investigating the responses of marine calcifiers to CO2-induced ocean acidification have reported surprisingly variable results. A generalized proton-pumping-based model of marine organisms' calcifying fluids, considered for present and forecasted atmospheric pCO2 scenarios (400 - 2850 μatm), is able to generate the full spectrum of calcification response patterns observed in prior ocean acidification experiments, including negative, non-linear, and positive. The removal of H+ from an organism's calcifying fluid requires energy. Two factors that influence the amount of energy required to regulate calcification site pH are the quantity of H+ removed from a given volume of the calcifying fluid and the H+-gradient across the membrane(s) that bounds the calcifying fluid. The energy required to maintain a H+-gradient across a membrane, known as the Nernst potential (E), can be defined as: E = (RT)/(nF) x ln([H+]e/[H+]i) where R is the universal gas constant, T is absolute temperature, n is the valence charge of H+, F is the Faraday constant, and [H+]e and [H+]i are H+ concentrations of the external seawater and of the organism's calcifying fluid, respectively. Because R, T, n and F are constants in the described H+-membrane system, the magnitude of the Nernst potential, or the energetic cost of maintaining a H+-gradient between external seawater and an organism's membrane-bound calcifying fluid, should be roughly proportional to [H+]e/[H+]i. The proton-pumping model is therefore parameterized by two end-member scenarios: one in which a fixed number of H+ is removed from the calcifying fluid, regardless of atmospheric pCO2, and another in which a fixed [H+]e/[H+]i is maintained. The model is empirically evaluated for the temperate scleractinian coral Astrangia poculata with in situ pH microelectrode measurements of the coral's calcifying fluid under control and acidified conditions. These measurements reveal that (1) the pH and, thus, aragonite saturation

Eddy-Pump: Pelagic carbon pump processes along the eddying Antarctic Polar Front in the Atlantic Sector of the Southern Ocean

NASA Astrophysics Data System (ADS)

Strass, Volker H.; Wolf-Gladrow, Dieter; Pakhomov, Evgeny A.; Klaas, Christine

2017-04-01

The Southern Ocean influences earth's climate in many ways. It hosts the largest upwelling region of the world oceans where 80% of deep waters resurface (Morrison et al., 2015). A prominent feature is the broad ring of cold water, the Antarctic Circumpolar Current (ACC), which encircles the Antarctic continent and connects all other oceans. The ACC plays a major role in the global heat and freshwater transports and ocean-wide cycles of chemical and biogenic elements, and harbours a series of unique and distinct ecosystems. Due to the upwelling of deep-water masses in the Antarctic Divergence, there is high supply of natural CO2 as well as macronutrients, leading to the worldwide highest surface nutrient concentrations. Despite the ample macronutrients supply, phytoplankton concentration is generally low, limited either by low micronutrient (iron) availability, insufficient light due to deep wind-mixed layers or grazing by zooplankton, or by the combination of all, varying temporally and regionally.

The biological pump and lower trophic level controls on carbon cycling in Lake Superior: Insights from a multi-pronged study

NASA Astrophysics Data System (ADS)

Schreiner, K. M.; Bramburger, A.; Ozersky, T.; Sheik, C.; Steinman, B. A.

2016-02-01

Lake Superior is the largest freshwater lake in the world, supporting economically important fisheries and providing drinking water to hundreds of thousands of people. In recent decades, summer surface water temperature and the intensity and duration of water column stratification in the lake has increased steadily. These physical changes have resulted in significant perturbations to lower trophic level ecosystem characteristics. Recent observations of Great Lakes plankton assemblages have revealed multi-decadal patterns of community reorganization, with increased relative abundance of taxa characteristic of warmer waters. These changes, coupled with changing nutrient concentrations and colonization by non-native taxa, threaten to shift trophic structure and carbon dynamics at the bottom of the food web. To this end, this study seeks to quantify the impacts of this ecosystem shift on carbon fixation, the biological pump, and organic carbon cycling in Lake Superior. Utilizing a combined sampling approach, in the summer of 2015 we collected water, sediment, and biological samples across a nearshore-to-offshore gradient in the western arm of Lake Superior. Analyses included the community composition of bacteria, archaea, phytoplankton, and zooplankton; water column carbon and nutrient speciation; algal pigments and pigment degradation products; and net primary productivity. The collection of surface sediments allowed for additional assessment of benthic-pelagic coupling. The novel combination of this wide-ranging set of analyses to a locally and globally important water body like Lake Superior allowed us to fully assess the interactions between lower trophic level biology and carbon and nutrient cycling throughout the water column. Preliminary data indicates that microbial community composition was variable across the western arm of Lake Superior and showed signs of stratification at individual stations (>100 m deep). Sample collection occurred soon after lake

Organic Matter Composition, Recycling Susceptibility, and the Effectiveness of the Biological Pump – An Evaluation Using NMR Spectra of Marine Plankton

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paytan, Adina

Carbon (C) sequestration through fertilization of phytoplankton with micronutrients and enhancement of the absorption and retention of atmospheric C by ocean biota heavily depends on the efficiency of the “biological pump”. The long-term effectiveness of this strategy depends on a net transfer of C from the upper ocean-atmosphere system to the deep ocean where the C is removed from contact with the atmosphere for an extended period of time. This C removal can be equated to the amount of C fixation by phytoplankton minus the C cycling and regeneration in the euphotic zone. If the regeneration efficiency is increased, thenmore » despite increased C fixation, no net loss (sequestration) of C will result. A reduction in cycling efficiency in the euphotic zone, on the other hand, will increase the effectiveness of the “biological pump” and thus C sequestration. The degree of organic matter biodegradation and recycling depends on the “reactivity” of compounds synthesized by the biota, which in turn, is controlled by the structural characteristic of these compounds. There is considerable evidence that different phytoplankton taxa differ substantially in their biogeochemical characteristics and it is likely that the relative abundance of different compounds synthesized by these distinct taxa, and even within each group at different growth conditions, will differ too. This variability in biosynthesis and thus abundance of a wide range of organic compounds in the water column would lend itself to different susceptibility for biodegradation and regeneration. Knowledge of the distribution of various organic matter structural groups synthesized by distinct taxa, the dependence of the organic matter compound classes on different growth conditions (temperature, light, nutrients) and the selective susceptibility of these compound to regeneration is crucial for estimating the potential for rapid regeneration in the euphotic zone, and thus the effectiveness of the “biological

Methyl bromide: ocean sources, ocean sinks, and climate sensitivity

NASA Technical Reports Server (NTRS)

Anbar, A. D.; Yung, Y. L.; Chavez, F. P.

1996-01-01

The oceans play an important role in the geochemical cycle of methyl bromide (CH3Br), the major carrier of O3-destroying bromine to the stratosphere. The quantity of CH3Br produced annually in seawater is comparable to the amount entering the atmosphere each year from natural and anthropogenic sources. The production mechanism is unknown but may be biological. Most of this CH3Br is consumed in situ by hydrolysis or reaction with chloride. The size of the fraction which escapes to the atmosphere is poorly constrained; measurements in seawater and the atmosphere have been used to justify both a large oceanic CH3Br flux to the atmosphere and a small net ocean sink. Since the consumption reactions are extremely temperature-sensitive, small temperature variations have large effects on the CH3Br concentration in seawater, and therefore on the exchange between the atmosphere and the ocean. The net CH3Br flux is also sensitive to variations in the rate of CH3Br production. We have quantified these effects using a simple steady state mass balance model. When CH3Br production rates are linearly scaled with seawater chlorophyll content, this model reproduces the latitudinal variations in marine CH3Br concentrations observed in the east Pacific Ocean by Singh et al. [1983] and by Lobert et al. [1995]. The apparent correlation of CH3Br production with primary production explains the discrepancies between the two observational studies, strengthening recent suggestions that the open ocean is a small net sink for atmospheric CH3Br, rather than a large net source. The Southern Ocean is implicated as a possible large net source of CH3Br to the atmosphere. Since our model indicates that both the direction and magnitude of CH3Br exchange between the atmosphere and ocean are extremely sensitive to temperature and marine productivity, and since the rate of CH3Br production in the oceans is comparable to the rate at which this compound is introduced to the atmosphere, even small

Methyl bromide: ocean sources, ocean sinks, and climate sensitivity.

PubMed

Anbar, A D; Yung, Y L; Chavez, F P

1996-03-01

The oceans play an important role in the geochemical cycle of methyl bromide (CH3Br), the major carrier of O3-destroying bromine to the stratosphere. The quantity of CH3Br produced annually in seawater is comparable to the amount entering the atmosphere each year from natural and anthropogenic sources. The production mechanism is unknown but may be biological. Most of this CH3Br is consumed in situ by hydrolysis or reaction with chloride. The size of the fraction which escapes to the atmosphere is poorly constrained; measurements in seawater and the atmosphere have been used to justify both a large oceanic CH3Br flux to the atmosphere and a small net ocean sink. Since the consumption reactions are extremely temperature-sensitive, small temperature variations have large effects on the CH3Br concentration in seawater, and therefore on the exchange between the atmosphere and the ocean. The net CH3Br flux is also sensitive to variations in the rate of CH3Br production. We have quantified these effects using a simple steady state mass balance model. When CH3Br production rates are linearly scaled with seawater chlorophyll content, this model reproduces the latitudinal variations in marine CH3Br concentrations observed in the east Pacific Ocean by Singh et al. [1983] and by Lobert et al. [1995]. The apparent correlation of CH3Br production with primary production explains the discrepancies between the two observational studies, strengthening recent suggestions that the open ocean is a small net sink for atmospheric CH3Br, rather than a large net source. The Southern Ocean is implicated as a possible large net source of CH3Br to the atmosphere. Since our model indicates that both the direction and magnitude of CH3Br exchange between the atmosphere and ocean are extremely sensitive to temperature and marine productivity, and since the rate of CH3Br production in the oceans is comparable to the rate at which this compound is introduced to the atmosphere, even small

Advances in Valveless Piezoelectric Pump with Cone-shaped Tubes

NASA Astrophysics Data System (ADS)

Zhang, Jian-Hui; Wang, Ying; Huang, Jun

2017-07-01

This paper reviews the development of valveless piezoelectric pump with cone-shaped tube chronologically, which have widely potential application in biomedicine and micro-electro-mechanical systems because of its novel principles and deduces the research direction in the future. Firstly, the history of valveless piezoelectric pumps with cone-shaped tubes is reviewed and these pumps are classified into the following types: single pump with solid structure or plane structure, and combined pump with parallel structure or series structure. Furthermore, the function of each type of cone-shaped tubes and pump structures are analyzed, and new directions of potential expansion of valveless piezoelectric pumps with cone-shaped tubes are summarized and deduced. The historical argument, which is provided by the literatures, that for a valveless piezoelectric pump with cone-shaped tubes, cone angle determines the flow resistance and the flow resistance determines the flow direction. The argument is discussed in the reviewed pumps one by one, and proved to be convincing. Finally, it is deduced that bionics is pivotal in the development of valveless piezoelectric pump with cone-shaped tubes from the perspective of evolution of biological structure. This paper summarizes the current valveless piezoelectric pumps with cone-shaped tubes and points out the future development, which may provide guidance for the research of piezoelectric actuators.

Reproductive Biology of Albacore Tuna (Thunnus alalunga) in the Western Indian Ocean

PubMed Central

Dhurmeea, Zahirah; Zudaire, Iker; Chassot, Emmanuel; Cedras, Maria; Nikolic, Natacha; Bourjea, Jérôme; West, Wendy; Appadoo, Chandani

2016-01-01

The reproductive biology of albacore tuna, Thunnus alalunga, in the western Indian Ocean was examined through analysis of the sex ratio, spawning season, length-at-maturity (L50), spawning frequency and fecundity. From 2013 to 2015, a total of 923 female and 867 male albacore were sampled. A bias in sex ratio was found in favor of females with fork length (LF) < 100 cm. Using histological analyses and gonadosomatic index, spawning was found to occur between 10°S and 30°S, mainly to the east of Madagascar from October to January. Large females contributed more to reproduction through their longer spawning period compared to small individuals. The L50 (mean ± standard error) of female albacore was estimated at 85.3 ± 0.7 cm LF. Albacore spawn on average every 2.2 days within the spawning region and spawning months, from November to January. Batch fecundity ranged between 0.26 and 2.09 million oocytes and the relative batch fecundity (mean ± standard deviation) was estimated at 53.4 ± 23.2 oocytes g-1 of somatic-gutted weight. The study provides new information on the reproductive development and classification of albacore in the western Indian Ocean. The reproductive parameters will reduce uncertainty in current stock assessment models which will eventually assist the fishery to be sustainable for future generations. PMID:28002431

The Ocean Tracking Network and its contribution to ocean biological observation

NASA Astrophysics Data System (ADS)

Whoriskey, F. G.

2016-02-01

Animals move to meet their needs for food, shelter, reproduction and to avoid unfavorable environments. In aquatic systems, it is essential that we understand these movements if we are to sustainably manage populations and maintain healthy ecosystems. Thus the ability to document and monitor changes in aquatic animal movements is a biological observing system need. The Ocean Tracking Network (OTN) is a global research, technology development, and data management platform headquartered at Dalhousie University, in Halifax, Nova Scotia working to fill this need. OTN uses electronic telemetry to document the local-to-global movements and survival of aquatic animals, and to correlate them to oceanographic or limnological variables that are influencing movements. Such knowledge can assist with planning for and managing of anthropogenic impacts on present and future animal distributions, including those due to climate change. OTN works with various tracking methods including satellite and data storage tag systems, but its dominant focus is acoustic telemetry. OTN is built on global partnerships for the sharing of equipment and data, and has stimulated technological development in telemetry by bringing researchers with needs for new capabilities together with manufacturers to generate, test, and operationalize new technologies. This has included pioneering work into the use of marine autonomous vehicles (Slocum electric gliders; Liquid Robotics Wave Glider) in animal telemetry research. Similarly, OTN scientists worked with the Sea Mammal Research Unit to develop mobile acoustic receiver that have been placed on grey seals and linked via Bluetooth to a satellite transmitter/receiver. This provided receiver coverage in areas occupied by the seals during their typically extensive migrations and allowed for the examination of ecosystem linkages by documenting behavioral interactions the seals had with the physical environment, conspecifics, and other tagged species.

Near-island biological hotspots in barren ocean basins

PubMed Central

Gove, Jamison M.; McManus, Margaret A.; Neuheimer, Anna B.; Polovina, Jeffrey J.; Drazen, Jeffrey C.; Smith, Craig R.; Merrifield, Mark A.; Friedlander, Alan M.; Ehses, Julia S.; Young, Charles W.; Dillon, Amanda K.; Williams, Gareth J.

2016-01-01

Phytoplankton production drives marine ecosystem trophic-structure and global fisheries yields. Phytoplankton biomass is particularly influential near coral reef islands and atolls that span the oligotrophic tropical oceans. The paradoxical enhancement in phytoplankton near an island-reef ecosystem—Island Mass Effect (IME)—was first documented 60 years ago, yet much remains unknown about the prevalence and drivers of this ecologically important phenomenon. Here we provide the first basin-scale investigation of IME. We show that IME is a near-ubiquitous feature among a majority (91%) of coral reef ecosystems surveyed, creating near-island ‘hotspots' of phytoplankton biomass throughout the upper water column. Variations in IME strength are governed by geomorphic type (atoll vs island), bathymetric slope, reef area and local human impacts (for example, human-derived nutrient input). These ocean oases increase nearshore phytoplankton biomass by up to 86% over oceanic conditions, providing basal energetic resources to higher trophic levels that support subsistence-based human populations. PMID:26881874

Near-island biological hotspots in barren ocean basins.

PubMed

Gove, Jamison M; McManus, Margaret A; Neuheimer, Anna B; Polovina, Jeffrey J; Drazen, Jeffrey C; Smith, Craig R; Merrifield, Mark A; Friedlander, Alan M; Ehses, Julia S; Young, Charles W; Dillon, Amanda K; Williams, Gareth J

2016-02-16

Phytoplankton production drives marine ecosystem trophic-structure and global fisheries yields. Phytoplankton biomass is particularly influential near coral reef islands and atolls that span the oligotrophic tropical oceans. The paradoxical enhancement in phytoplankton near an island-reef ecosystem--Island Mass Effect (IME)--was first documented 60 years ago, yet much remains unknown about the prevalence and drivers of this ecologically important phenomenon. Here we provide the first basin-scale investigation of IME. We show that IME is a near-ubiquitous feature among a majority (91%) of coral reef ecosystems surveyed, creating near-island 'hotspots' of phytoplankton biomass throughout the upper water column. Variations in IME strength are governed by geomorphic type (atoll vs island), bathymetric slope, reef area and local human impacts (for example, human-derived nutrient input). These ocean oases increase nearshore phytoplankton biomass by up to 86% over oceanic conditions, providing basal energetic resources to higher trophic levels that support subsistence-based human populations.

Efficiency of energy conversion in model biological pumps. Optimization by linear nonequilibrium thermodynamic relations.

PubMed

Stucki, J W; Compiani, M; Caplan, S R

1983-09-01

Experimental investigations showed linear relations between flows and forces in some biological energy converters operating far from equilibrium. This observation cannot be understood on the basis of conventional nonequilibrium thermodynamics. Therefore, the efficiencies of a linear and a nonlinear mode of operation of an energy converter (a hypothetical redox-driven H+ pump) were compared. This comparison revealed that at physiological values of the forces and degrees of coupling (1) the force ratio permitting optimal efficiency was much higher in the linear than in the nonlinear mode and (2) the linear mode of operation was at least 10(6)-times more efficient that the nonlinear one. These observations suggest that the experimentally observed linear relations between flows and forces, particularly in the case of oxidative phosphorylation, may be due to a feedback regulation maintaining linear thermodynamic relations far from equilibrium. This regulation may have come about as the consequence of an evolutionary drive towards higher efficiency.

Restricted Inter-ocean Exchange and Attenuated Biological Export Caused Enhanced Carbonate Preservation in the PETM Ocean

NASA Astrophysics Data System (ADS)

Luo, Y.; Boudreau, B. P.; Dickens, G. R.; Sluijs, A.; Middelburg, J. J.

2015-12-01

Carbon dioxide (CO2) release during the Paleocene-Eocene Thermal Maximum (PETM, 55.8 Myr BP) acidified the oceans, causing a decrease in calcium carbonate (CaCO3) preservation. During the subsequent recovery from this acidification, the sediment CaCO3 content came to exceed pre-PETM values, known as over-deepening or over-shooting. Past studies claim to explain these trends, but have failed to reproduce quantitatively the time series of CaCO3 preservation. We employ a simple biogeochemical model to recreate the CaCO3 records preserved at Walvis Ridge of the Atlantic Ocean. Replication of the observed changes, both shallowing and the subsequent over-deepening, requires two conditions not previously considered: (1) limited deep-water exchange between the Indo-Atlantic and Pacific oceans and (2) a ~50% reduction in the export of CaCO3 to the deep sea during acidification. Contrary to past theories that attributed over-deepening to increased riverine alkalinity input, we find that over-deepening is an emergent property, generated at constant riverine input when attenuation of CaCO3 export causes an unbalanced alkalinity input to the deep oceans (alkalinization) and the development of deep super-saturation. Restoration of CaCO3 export, particularly in the super-saturated deep Indo-Atlantic ocean, later in the PETM leads to greater accumulation of carbonates, ergo over-shooting, which returns the ocean to pre-PETM conditions over a time scale greater than 200 kyr. While this feedback between carbonate export and the riverine input has not previously been considered, it appears to constitute an important modification of the classic carbonate compensation concept used to explain oceanic response to acidification.

Ocean Optics Protocols for Satellite Ocean Color Sensor Validation. Volume 6; Special Topics in Ocean Optics Protocols and Appendices; Revised

NASA Technical Reports Server (NTRS)

Mueller, J. L. (Editor); Fargion, Giulietta S. (Editor); McClain, Charles R. (Editor)

2003-01-01

This document stipulates protocols for measuring bio-optical and radiometric data for the Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) Project activities and algorithm development. The document is organized into 6 separate volumes as Ocean Optics Protocols for Satellite Ocean Color Sensor Validation, Revision 4. Volume I: Introduction, Background and Conventions; Volume II: Instrument Specifications, Characterization and Calibration; Volume III: Radiometric Measurements and Data Analysis Methods; Volume IV: Inherent Optical Properties: Instruments, Characterization, Field Measurements and Data Analysis Protocols; Volume V: Biogeochemical and Bio-Optical Measurements and Data Analysis Methods; Volume VI: Special Topics in Ocean Optics Protocols and Appendices. The earlier version of Ocean Optics Protocols for Satellite Ocean Color Sensor Validation, Revision 3 (Mueller and Fargion 2002, Volumes 1 and 2) is entirely superseded by the six volumes of Revision 4 listed above.

Biological oceanography of the red oceanic system

NASA Astrophysics Data System (ADS)

Theil, Hjalmar; Weikert, Horst

1. In 1977, 1979 and 1980-81, investigations were carried out which aimed at evaluating the potential risks from mining metalliferous muds precipating in the Atlantis II Deep of the central Red Sea. This environmental research was initiated by the Saudi Sudanese Red Sea Joint Commission in order to avoid any danger for the Red Sea ecosystem. The broad environmental research programme coherent studies in physical, chemical, biological, and geological oceanography as well as toxicological investigations in the oceanic and in reef zones. We summarise the results from our biological fiels studies in the open sea. 2. The biological investigations were concentrated on the area of the Atlantis II Deep. Benthos was sampled between 700-2000m. For comparison a few samples were also taken further north in the central Red Sea, and to east and west along the flanking deep terraces (500-1000m). Plankton studies covered the total water column above the Deep, and were extended along the axial through to north and south. 3. Benthos sampling was carried out using a heavy closing trawl, a large box grab (box size 50 × 50 cm), Van Veen grabs and traps; photographic surveys were made a phototrap and a photosled. Community respiration was measured with a ship-board method using grab subsamples. Nutrient concentrations, seston and phytoplankton standing stocks as well as in situ primary production were determined from hydrocast samples. Data on zooplankton and micronekton composition and standing stock were obtained from samples collected using different multiple opening-and-closing nets equipped with 100 μm, 300 μm, and 1000 μm mesh sizes. Daily and ontogenetical vertical migration patterns were studied by comparisons of data from midday and midnight tows. 4. Throughout the whole area the sediment is a pteropod ooze containing low contentrations of organic matter; measured organic carbon and nitrogen contents were 0.5 and 0.05% respectively, and chloroplastic pigment equivalents

Biology and air-sea gas exchange controls on the distribution of carbon isotope ratios (δ13C) in the ocean

NASA Astrophysics Data System (ADS)

Schmittner, A.; Gruber, N.; Mix, A. C.; Key, R. M.; Tagliabue, A.; Westberry, T. K.

2013-05-01

Analysis of observations and sensitivity experiments with a new three-dimensional global model of stable carbon isotope cycling elucidate the processes that control the distribution of δ13C in the contemporary and preindustrial ocean. Biological fractionation dominates the distribution of δ13CDIC of dissolved inorganic carbon (DIC) due to the sinking of isotopically light δ13C organic matter from the surface into the interior ocean. This process leads to low δ13CDIC values at dephs and in high latitude surface waters and high values in the upper ocean at low latitudes with maxima in the subtropics. Air-sea gas exchange provides an important secondary influence due to two effects. First, it acts to reduce the spatial gradients created by biology. Second, the associated temperature dependent fractionation tends to increase (decrease) δ13CDIC values of colder (warmer) water, which generates gradients that oppose those arising from biology. Our model results suggest that both effects are similarly important in influencing surface and interior δ13CDIC distributions. However, air-sea gas exchange is slow, so biological effect dominate spatial δ13CDIC gradients both in the interior and at the surface, in constrast to conclusions from some previous studies. Analysis of a new synthesis of δ13CDIC measurements from years 1990 to 2005 is used to quantify preformed (δ13Cpre) and remineralized (δ13Crem) contributions as well as the effects of biology (Δδ13Cbio) and air-sea gas exchange (δ13C*). The model reproduces major features of the observed large-scale distribution of δ13CDIC, δ13Cpre, δ13Crem, δ13C*, and Δδ13Cbio. Residual misfits are documented and analyzed. Simulated surface and subsurface δ13CDIC are influenced by details of the ecosystem model formulation. For example, inclusion of a simple parameterization of iron limitation of phytoplankton growth rates and temperature-dependent zooplankton grazing rates improves the agreement with δ13CDIC

Proton pumping accompanies calcification in foraminifera.

PubMed

Toyofuku, Takashi; Matsuo, Miki Y; de Nooijer, Lennart Jan; Nagai, Yukiko; Kawada, Sachiko; Fujita, Kazuhiko; Reichart, Gert-Jan; Nomaki, Hidetaka; Tsuchiya, Masashi; Sakaguchi, Hide; Kitazato, Hiroshi

2017-01-27

Ongoing ocean acidification is widely reported to reduce the ability of calcifying marine organisms to produce their shells and skeletons. Whereas increased dissolution due to acidification is a largely inorganic process, strong organismal control over biomineralization influences calcification and hence complicates predicting the response of marine calcifyers. Here we show that calcification is driven by rapid transformation of bicarbonate into carbonate inside the cytoplasm, achieved by active outward proton pumping. Moreover, this proton flux is maintained over a wide range of pCO 2 levels. We furthermore show that a V-type H + ATPase is responsible for the proton flux and thereby calcification. External transformation of bicarbonate into CO 2 due to the proton pumping implies that biomineralization does not rely on availability of carbonate ions, but total dissolved CO 2 may not reduce calcification, thereby potentially maintaining the current global marine carbonate production.

Proton pumping accompanies calcification in foraminifera

NASA Astrophysics Data System (ADS)

Toyofuku, Takashi; Matsuo, Miki Y.; de Nooijer, Lennart Jan; Nagai, Yukiko; Kawada, Sachiko; Fujita, Kazuhiko; Reichart, Gert-Jan; Nomaki, Hidetaka; Tsuchiya, Masashi; Sakaguchi, Hide; Kitazato, Hiroshi

2017-01-01

Ongoing ocean acidification is widely reported to reduce the ability of calcifying marine organisms to produce their shells and skeletons. Whereas increased dissolution due to acidification is a largely inorganic process, strong organismal control over biomineralization influences calcification and hence complicates predicting the response of marine calcifyers. Here we show that calcification is driven by rapid transformation of bicarbonate into carbonate inside the cytoplasm, achieved by active outward proton pumping. Moreover, this proton flux is maintained over a wide range of pCO2 levels. We furthermore show that a V-type H+ ATPase is responsible for the proton flux and thereby calcification. External transformation of bicarbonate into CO2 due to the proton pumping implies that biomineralization does not rely on availability of carbonate ions, but total dissolved CO2 may not reduce calcification, thereby potentially maintaining the current global marine carbonate production.

Arctic Ice-Ocean Coupling and Gyre Equilibration Observed With Remote Sensing

NASA Astrophysics Data System (ADS)

Dewey, Sarah; Morison, James; Kwok, Ronald; Dickinson, Suzanne; Morison, David; Andersen, Roger

2018-02-01

Model and observational evidence has shown that ocean current speeds in the Beaufort Gyre have increased and recently stabilized. Because these currents rival ice drift speeds, we examine the potential for the Beaufort Gyre's shift from a system in which the wind drives the ice and the ice drives a passive ocean to one in which the ocean often, in the absence of high winds, drives the ice. The resultant stress exerted on the ocean by the ice and the resultant Ekman pumping are reversed, without any change in average wind stress curl. Through these curl reversals, the ice-ocean stress provides a key feedback in Beaufort Gyre stabilization. This manuscript constitutes one of the first observational studies of ice-ocean stress inclusive of geostrophic ocean currents, by making use of recently available remote sensing data.

Global sea-air CO 2 flux based on climatological surface ocean pCO 2, and seasonal biological and temperature effects

NASA Astrophysics Data System (ADS)

Takahashi, Taro; Sutherland, Stewart C.; Sweeney, Colm; Poisson, Alain; Metzl, Nicolas; Tilbrook, Bronte; Bates, Nicolas; Wanninkhof, Rik; Feely, Richard A.; Sabine, Christopher; Olafsson, Jon; Nojiri, Yukihiro

Based on about 940,000 measurements of surface-water pCO 2 obtained since the International Geophysical Year of 1956-59, the climatological, monthly distribution of pCO 2 in the global surface waters representing mean non-El Niño conditions has been obtained with a spatial resolution of 4°×5° for a reference year 1995. The monthly and annual net sea-air CO 2 flux has been computed using the NCEP/NCAR 41-year mean monthly wind speeds. An annual net uptake flux of CO 2 by the global oceans has been estimated to be 2.2 (+22% or -19%) Pg C yr -1 using the (wind speed) 2 dependence of the CO 2 gas transfer velocity of Wanninkhof (J. Geophys. Res. 97 (1992) 7373). The errors associated with the wind-speed variation have been estimated using one standard deviation (about±2 m s -1) from the mean monthly wind speed observed over each 4°×5° pixel area of the global oceans. The new global uptake flux obtained with the Wanninkhof (wind speed) 2 dependence is compared with those obtained previously using a smaller number of measurements, about 250,000 and 550,000, respectively, and are found to be consistent within±0.2 Pg C yr -1. This estimate for the global ocean uptake flux is consistent with the values of 2.0±0.6 Pg C yr -1 estimated on the basis of the observed changes in the atmospheric CO 2 and oxygen concentrations during the 1990s (Nature 381 (1996) 218; Science 287 (2000) 2467). However, if the (wind speed) 3 dependence of Wanninkhof and McGillis (Res. Lett. 26 (1999) 1889) is used instead, the annual ocean uptake as well as the sensitivity to wind-speed variability is increased by about 70%. A zone between 40° and 60° latitudes in both the northern and southern hemispheres is found to be a major sink for atmospheric CO 2. In these areas, poleward-flowing warm waters meet and mix with the cold subpolar waters rich in nutrients. The pCO 2 in the surface water is decreased by the cooling effect on warm waters and by the biological drawdown of pCO 2 in

Dust and Ocean Plants

NASA Technical Reports Server (NTRS)

2002-01-01

Adding iron to the diet of marine plant life has been shown in shipboard experiments to boost the amount of carbon-absorbing phytoplankton in certain parts of the world's oceans. A new study promises to give scientists their first global picture of the extent of these unique 'iron-limited' ocean regions, an important step in understanding how the ocean's biology controls the flow of carbon between the atmosphere and the ocean. The new study by researchers at NASA's Goddard Space Flight Center and the Department of Energy's Oak Ridge National Laboratory was presented at the American Geophysical Union's annual meeting in San Francisco on Friday, Dec. 15, 2000. Oceanic phytoplankton remove nearly as much carbon from the atmosphere each year as all land-based plants. Identifying the location and size of nutrient-limited areas in the open ocean has challenged oceanographers for nearly a century. The study pinpointed iron-limited regions by seeing which phytoplankton-rich areas of the world's oceans were also areas that received iron from wind-blown dust. In this map, areas with high levels of chlorophyll from phytoplankton and high levels of dust deposition (high correlation coefficients) are indicated in dark brown. Dust deposition was calculated by a 3-year modelled climatology for the years 1996-1998. The chlorophyll measurements are from 1998 observations from the SeaWiFS (Sea-viewing Wide Field-of-view Sensor) instrument on the OrbView-2 satellite. 'Global, satellite-based analyses such as this gives us insight into where iron deposition may be limiting ocean biological activity,' says lead author David Erickson of Oak Ridge National Laboratory's Computer Science and Mathematics Division. 'With this information we will be able to infer how the ocean productivity/iron deposition relationship might shift in response to climate change.' Map Source: David Erickson, Oak Ridge National Laboratory's Computer Science and Mathematics Division

Enhanced Particulate Organic Carbon Export at Eddy Edges in the Oligotrophic Western North Pacific Ocean

PubMed Central

Shih, Yung-Yen; Hung, Chin-Chang; Gong, Gwo-Ching; Chung, Wan-Chen; Wang, Yu-Huai; Lee, I-Huan; Chen, Kuo-Shu; Ho, Chuang-Yi

2015-01-01

Mesoscale eddies in the subtropical oligotrophic ocean are ubiquitous and play an important role in nutrient supply and oceanic primary production. However, it is still unclear whether these mesoscale eddies can efficiently transfer CO2 from the atmosphere to deep waters via biological pump because of the sampling difficulty due to their transient nature. In 2007, particulate organic carbon (POC) fluxes, measured below the euphotic zone at the edge of warm eddy were 136–194 mg-C m−2 d−1 which was greatly elevated over that (POC flux = 26–35 mg-C m−2 d−1) determined in the nutrient-depleted oligotrophic waters in the Western North Pacific (WNP). In 2010, higher POC fluxes (83–115 mg-C m−2 d−1) were also observed at the boundary of mesoscale eddies in the WNP. The enhanced POC flux at the edge of eddies was mainly attributed to both large denuded diatom frustules and zooplankton fecal pellets based on scanning electron microscopy (SEM) examination. The result suggests that mesoscale eddies in the oligotrophic waters in the subtropical WNP can efficiently increase the oceanic carbon export flux and the eddy edge is a crucial conduit in carbon sequestration to deep waters. PMID:26171611

A linkage between Asian dust, dissolved iron and marine export production in the deep ocean

NASA Astrophysics Data System (ADS)

Han, Yongxiang; Zhao, Tianliang; Song, Lianchun; Fang, Xiaomin; Yin, Yan; Deng, Zuqin; Wang, Suping; Fan, Shuxian

2011-08-01

Iron-addition experiments have revealed that iron supply exerts controls on biogeochemical cycles in the ocean and ultimately influences the Earth's climate system. The iron hypothesis in its broad outlines has been proved to be correct. However, the hypothesis needs to be verified with an observable biological response to specific dust deposition events. Plankton growth following the Asian dust storm over Ocean Station PAPA (50°N, 145°W) in the North Pacific Ocean in April 2001 was the first supportive evidence of natural aeolian iron inputs to ocean; The data were obtained through the SeaWiFS satellite and robot carbon explorers by Bishop et al. Using the NARCM modeling results in this study, the calculated total dust deposition flux was 35 mg m -2 per day in PAPA region from the dust storm of 11-13 April, 2001 into 0.0615 mg m -2 d -1 (about 1100 nM) soluble iron in the surface layer at Station PAPA. It was enough for about 1100 nM to enhance the efficiency of the marine biological pump and trigger the rapid increase of POC and chlorophyll. The iron fertilization hypothesis therefore is plausible. However, even if this specific dust event can support the iron fertilization hypothesis, long-term observation data are lacking in marine export production and continental dust. In this paper, we also conducted a simple correlation analysis between the diatoms and foraminifera at about 3000 m and 4000 m at two subarctic Pacific stations and the dust aerosol production from China's mainland. The correlation coefficient between marine export production and dust storm frequency in the core area of the dust storms was significantly high, suggesting that aerosols generated by Asian dust storm are the source of iron for organic matter fixation in the North Pacific Ocean. These results suggest that there could be an interlocking chain for the change of atmospheric dust aerosol-soluble iron-marine export production.

The Evolution of Indian and Pacific Ocean Denitrification and Nitrogen Dynamcs since the Miocene

NASA Astrophysics Data System (ADS)

Ravelo, A. C.; Carney, C.; Rosenthal, Y.; Holbourn, A.; Kulhanek, D. K.

2017-12-01

The feedbacks between geochemical cycles and physical climate change are poorly understood; however, there has been tremendous progress in developing coupled models to help predict the direction and strength of these feedbacks. As such, there is a need for more data to validate and test these models. To this end, the nitrogen (N) cycle, and its links to the biological pump and to climate, is an active area of paleoceanographic research. Using N isotope records, Robinson et al. (2014) showed that pelagic denitrification in the Indian and Pacific Oceans intensified as climate cooled and subsurface ventilation decreased since the Pliocene. They pointed out that a more ventilated warm Pliocene contrasts with glacial-interglacial patterns wherein more ventilation occurs during cold phases, indicating that different mechanisms may occur at different timescales. Our objective is to better understand the nature of the feedbacks between the oceanic N cycle and climate by focusing on the large dynamic range of conditions that occurred during and since the Miocene. We used new cores drilled during IODP Expedition 363 to generate bulk sediment N isotope records at three western tropical Pacific sites (U1486, U1488, U1490) and one southeastern tropical Indian Ocean site (U1482). We find that the N isotope trends since the Pliocene are in agreement with previous studies showing increasing denitrification as climate cooled. In the Miocene, the Indian Ocean record shows no long-term N isotope trend whereas the Pacific Ocean records show a trend that is roughly coupled to changes in global climate suggesting that pelagic denitrification in the Pacific was strongly influenced by greater ventilation during global warmth. However, there are notable deviations from this coupling during several intervals in the Miocene, and there are site-to-site differences in trends. These deviations and differences can be explained by changes in tropical productivity (e.g., late Miocene biogenic

Electrokinetically pumped high pressure sprays

DOEpatents

Schoeniger, Joseph S [Oakland, CA; Paul, Phillip H [Livermore, CA; Schoeniger, Luke [Pittsford, NY

2005-11-01

An electrokinetic pump capable of producing high pressure is combined with a nozzle having a submicron orifice to provide a high pressure spray device. Because of its small size, the device can be contained within medical devices such as an endoscope for delivering biological materials such as DNA, chemo therapeutic agents, or vaccines to tissues and cells.

Electrokinetically pumped high pressure sprays

DOEpatents

Schoeniger, Joseph S.; Paul, Phillip H.; Schoeniger, Luke

2002-01-01

An electrokinetic pump capable of producing high pressure is combined with a nozzle having a submicron orifice to provide a high pressure spray device. Because of its small size, the device can be contained within medical devices such as an endoscope for delivering biological materials such as DNA, chemo therapeutic agents, or vaccines to tissues and cells.

Defining Essential Biodiversity Variables (EBVs) as a contribution to Essential Ocean Variables (EOVs): A Core Task of the Marine Biodiversity Observation Network (MBON) to Accelerate Integration of Biological Observations in the Global Ocean Observing System (GOOS)

NASA Astrophysics Data System (ADS)

Pearlman, J.; Muller-Karger, F. E.; Sousa Pinto, I.; Costello, M. J.; Duffy, J. E.; Appeltans, W.; Fischer, A. S.; Canonico, G.; Klein, E.; Obura, D.; Montes, E.; Miloslavich, P.; Howard, M.

2017-12-01

The Marine Biodiversity Observation Network (MBON) is a networking effort under the umbrella of the Group on Earth Observations Biodiversity Observation Network (GEO BON). The objective of the MBON is to link existing groups engaged in ocean observation and help define practical indices to deploy in an operational manner to track changes in the number of marine species, the abundance and biomass of marine organisms, the diverse interactions between organisms and the environment, and the variability and change of specific habitats of interest. MBON serves as the biodiversity arm of Blue Planet, the initiative of the Group on Earth Observations (GEO) for the benefit of society. The Global Ocean Observing System (GOOS) was established under the auspices of the Intergovernmental Oceanographic Commission (IOC) in 1991 to organize international ocean observing efforts. The mission of the GOOS is to support monitoring to improve the management of marine and coastal ecosystems and resources, and to enable scientific research. GOOS is engaged in a continuing, rigorous process of identifying Essential Ocean Variables (EOVs). MBON is working with GOOS and the Ocean Biogeographic Information System (OBIS, also under the IOC) to define Essential Biodiversity Variables (EBVs) as those Essential Ocean Variables (EOVs) that have explicit taxonomic records associated with them. For practical purposes, EBVs are a subset of the EOVs. The focus is to promote the integration of biological EOVs including EBVs into the existing and planned national and international ocean observing systems. The definition avoids a proliferation of 'essential' variables across multiple organizations. MBON will continue to advance practical and wide use of EBVs and related EOV. This is an effective way to contribute to several UN assessments (e.g., from IPBES, IPCC, and the World Ocean Assessment under the UN Regular Process), UN Sustainable Development Goals, and to address targets and goals defined under

Nonuniform ocean acidification and attenuation of the ocean carbon sink

NASA Astrophysics Data System (ADS)

Fassbender, Andrea J.; Sabine, Christopher L.; Palevsky, Hilary I.

2017-08-01

Surface ocean carbon chemistry is changing rapidly. Partial pressures of carbon dioxide gas (pCO2) are rising, pH levels are declining, and the ocean's buffer capacity is eroding. Regional differences in short-term pH trends primarily have been attributed to physical and biological processes; however, heterogeneous seawater carbonate chemistry may also be playing an important role. Here we use Surface Ocean CO2 Atlas Version 4 data to develop 12 month gridded climatologies of carbonate system variables and explore the coherent spatial patterns of ocean acidification and attenuation in the ocean carbon sink caused by rising atmospheric pCO2. High-latitude regions exhibit the highest pH and buffer capacity sensitivities to pCO2 increases, while the equatorial Pacific is uniquely insensitive due to a newly defined aqueous CO2 concentration effect. Importantly, dissimilar regional pH trends do not necessarily equate to dissimilar acidity ([H+]) trends, indicating that [H+] is a more useful metric of acidification.

Atmospheric correction of AVIRIS data in ocean waters

NASA Technical Reports Server (NTRS)

Terrie, Gregory; Arnone, Robert

1992-01-01

Hyperspectral data offers unique capabilities for characterizing the ocean environment. The spectral characterization of the composition of ocean waters can be organized into biological and terrigenous components. Biological photosynthetic pigments in ocean waters have unique spectral ocean color signatures which can be associated with different biological species. Additionally, suspended sediment has different scattering coefficients which result in ocean color signatures. Measuring the spatial distributions of these components in the maritime environments provides important tools for understanding and monitoring the ocean environment. These tools have significant applications in pollution, carbon cycle, current and water mass detection, location of fronts and eddies, sewage discharge and fate etc. Ocean color was used from satellite for describing the spatial variability of chlorophyll, water clarity (K(sub 490)), suspended sediment concentration, currents etc. Additionally, with improved atmospheric correction methods, ocean color results produced global products of spectral water leaving radiance (L(sub W)). Ocean color results clearly indicated strong applications for characterizing the spatial and temporal variability of bio-optical oceanography. These studies were largely the results of advanced atmospheric correction techniques applied to multispectral imagery. The atmosphere contributes approximately 80 percent - 90 percent of the satellite received radiance in the blue-green portion of the spectrum. In deep ocean waters, maximum transmission of visible radiance is achieved at 490nm. Conversely, nearly all of the light is absorbed by the water at wavelengths greater than about 650nm and thus appears black. These spectral ocean properties are exploited by algorithms developed for the atmospheric correction used in satellite ocean color processing. The objective was to apply atmospheric correction techniques that were used for procesing satellite Coastal

Iron availability limits the ocean nitrogen inventory stabilizing feedbacks between marine denitrification and nitrogen fixation

NASA Astrophysics Data System (ADS)

Moore, J. Keith; Doney, Scott C.

2007-06-01

Recent upward revisions in key sink/source terms for fixed nitrogen (N) in the oceans imply a short residence time and strong negative feedbacks involving denitrification and N fixation to prevent large swings in the ocean N inventory over timescales of a few centuries. We tested the strength of these feedbacks in a global biogeochemical elemental cycling (BEC) ocean model that includes water column denitrification and an explicit N fixing phytoplankton group. In the northern Indian Ocean and over longer timescales in the tropical Atlantic, we find strong stabilizing feedbacks that minimize changes in marine N inventory over timescales of ˜30-200 years. In these regions high atmospheric dust/iron inputs lead to phosphorus limitation of diazotrophs, and thus a tight link between N fixation and surface water N/P ratios. Maintenance of the oxygen minimum zones in these basins depends on N fixation driven export. The stabilizing feedbacks in other regions are significant but weaker owing to iron limitation of the diazotrophs. Thus Fe limitation appears to restrict the ability of N fixation to compensate for changes in denitrification in the current climate, perhaps leading the oceans to lose fixed N. We suggest that iron is the ultimate limiting nutrient leading to nitrogen being the proximate limiting nutrient over wide regions today. Iron stress was at least partially alleviated during more dusty, glacial times, leading to a higher marine N inventory, increased export production, and perhaps widespread phosphorus limitation of the phytoplankton community. The increased efficiency of the biological pump would have contributed to the glacial drawdown in atmospheric CO2.

Causes of strong ocean heating during glacial periods

NASA Astrophysics Data System (ADS)

Zimov, N.; Zimov, S. A.

2013-12-01

During the last deglaciation period, the strongest climate changes occurred across the North Atlantic regions. Analyses of borehole temperatures from the Greenland ice sheet have yielded air temperature change estimates of 25°C over the deglaciation period (Dahl-Jensen et al. 1998). Such huge temperature changes cannot currently be explained in the frames of modern knowledge about climate. We propose that glacial-interglacial cycles are connected with gradual warming of ocean interior waters over the course of glaciations and quick transport of accumulated heat from ocean to the atmosphere during the deglaciation periods. Modern day ocean circulation is dominated by thermal convection with cold waters subsiding in the Northern Atlantic and filling up the ocean interior with cold and heavy water. However during the glaciation thermal circulation stopped and ocean circulation was driven by 'haline pumps' -Red and Mediterranean seas connected with ocean with only narrow but deep straights acts as evaporative basins, separating ocean water into fresh water which returns to the ocean surface (precipitation) and warm but salty, and therefore heavy, water which flows down to the ocean floor. This haline pump is stratifying the ocean, allowing warmer water locate under the colder water and thus stopping thermal convection in the ocean. Additional ocean interior warming is driven by geothermal heat flux and decomposition of organic rain. To test the hypothesis we present simple ocean box model that describes thermohaline circulation in the World Ocean. The first box is the Red and Mediterranean sea, the second is united high-latitude seas, the third is the ocean surface, and the fourth the ocean interior. The volume of these water masses and straight cross-sections are taken to be close to real values. We have accepted that the exchange of water between boxes is proportional to the difference in water density in these boxes, Sun energy inputs to the ocean and sea surface

Magnetohydrodynamic pump with a system for promoting flow of fluid in one direction

DOEpatents

Lemoff, Asuncion V [Union City, CA; Lee, Abraham P [Irvine, CA

2010-07-13

A magnetohydrodynamic pump for pumping a fluid. The pump includes a microfluidic channel for channeling the fluid, a MHD electrode/magnet system operatively connected to the microfluidic channel, and a system for promoting flow of the fluid in one direction in the microfluidic channel. The pump has uses in the medical and biotechnology industries for blood-cell-separation equipment, biochemical assays, chemical synthesis, genetic analysis, drug screening, an array of antigen-antibody reactions, combinatorial chemistry, drug testing, medical and biological diagnostics, and combinatorial chemistry. The pump also has uses in electrochromatography, surface micromachining, laser ablation, inkjet printers, and mechanical micromilling.

18. Electrically driven pumps in Armory Street Pump House. Pumps ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

18. Electrically driven pumps in Armory Street Pump House. Pumps in background formerly drew water from the clear well. They went out of service when use of the beds was discontinued. Pumps in the foreground provide high pressure water to Hamden. - Lake Whitney Water Filtration Plant, Armory Street Pumphouse, North side of Armory Street between Edgehill Road & Whitney Avenue, Hamden, New Haven County, CT

Environmental factors controlling phytoplankton productivity and phenology in the Southern Ocean

NASA Astrophysics Data System (ADS)

Ardyna, M.; Claustre, H.; Sallee, J. B.; Gentili, B.; D'Ortenzio, F.

2016-02-01

The Southern Ocean (SO), highly sensitive to climate change, is currently experiencing a rapid warming and freshening. Such drastic hydrographical changes may significantly alter the SO's biological carbon pump (i.e., the efficiency of primary production and its transfers to higher trophic levels and/or sequestration to depth). However, before making any predictions, a better understanding of the biogeography and environmental factors controlling phytoplankton processes (i.e., productivity and phenology) in the Southern Ocean is clearly needed. We present here a bio-regionalization of the SO from satellite-derived observations, where a range of three orders of magnitude of productivity is observed. A clear latitudinal gradient in the bloom initiation was underpinned following the light regime, with some exception in well-mixed and sea-ice edge areas. Environmental factors controlling the phytoplankton phenology and productivity appear to be completely decoupled. Phytoplankton productivity in the SO is clearly associated to both shallow areas and front locations, where iron limitation seems to be less pronounced. These findings will give us a more comprehensive understanding in both space and time of the limiting factors of PP (i.e., nutrients, light-mixing regime…), which are of fundamental interest for identifying and explaining potential ongoing changes in SO's marine ecosystems.

Chapter 1. Impacts of the oceans on climate change.

PubMed

Reid, Philip C; Fischer, Astrid C; Lewis-Brown, Emily; Meredith, Michael P; Sparrow, Mike; Andersson, Andreas J; Antia, Avan; Bates, Nicholas R; Bathmann, Ulrich; Beaugrand, Gregory; Brix, Holger; Dye, Stephen; Edwards, Martin; Furevik, Tore; Gangstø, Reidun; Hátún, Hjálmar; Hopcroft, Russell R; Kendall, Mike; Kasten, Sabine; Keeling, Ralph; Le Quéré, Corinne; Mackenzie, Fred T; Malin, Gill; Mauritzen, Cecilie; Olafsson, Jón; Paull, Charlie; Rignot, Eric; Shimada, Koji; Vogt, Meike; Wallace, Craig; Wang, Zhaomin; Washington, Richard

2009-01-01

The oceans play a key role in climate regulation especially in part buffering (neutralising) the effects of increasing levels of greenhouse gases in the atmosphere and rising global temperatures. This chapter examines how the regulatory processes performed by the oceans alter as a response to climate change and assesses the extent to which positive feedbacks from the ocean may exacerbate climate change. There is clear evidence for rapid change in the oceans. As the main heat store for the world there has been an accelerating change in sea temperatures over the last few decades, which has contributed to rising sea-level. The oceans are also the main store of carbon dioxide (CO2), and are estimated to have taken up approximately 40% of anthropogenic-sourced CO2 from the atmosphere since the beginning of the industrial revolution. A proportion of the carbon uptake is exported via the four ocean 'carbon pumps' (Solubility, Biological, Continental Shelf and Carbonate Counter) to the deep ocean reservoir. Increases in sea temperature and changing planktonic systems and ocean currents may lead to a reduction in the uptake of CO2 by the ocean; some evidence suggests a suppression of parts of the marine carbon sink is already underway. While the oceans have buffered climate change through the uptake of CO2 produced by fossil fuel burning this has already had an impact on ocean chemistry through ocean acidification and will continue to do so. Feedbacks to climate change from acidification may result from expected impacts on marine organisms (especially corals and calcareous plankton), ecosystems and biogeochemical cycles. The polar regions of the world are showing the most rapid responses to climate change. As a result of a strong ice-ocean influence, small changes in temperature, salinity and ice cover may trigger large and sudden changes in regional climate with potential downstream feedbacks to the climate of the rest of the world. A warming Arctic Ocean may lead to

Ocean Color Data at the Goddard DAAC

NASA Technical Reports Server (NTRS)

1999-01-01

The apparent color of the ocean is determined by the interactions of incident light with substances or particles present in the water. The most significant constituents are free-floating photosynthetic organisms (phytoplankton) and inorganic particulates. Phytoplankton contain chlorophyll, which absorbs light at blue and red wavelengths and transmits in the green. Particulate matter can reflect and absorb light, which reduces the clarity (light transmission) of the water. Substances dissolved in water can also affect its color. Observations of ocean color from space, utilizing sensors specially designed to detect the small amount of light radiating from the sea surface, provide a global picture of the patterns of biological productivity in the world's oceans. For that reason, ocean color remote sensing data is a vital resource for biological oceanography. Unlike the limited area of the ocean that can be investigated from a research ship, data from a satellite sensor covers a large region and provides a comprehensive view of the marine environment.

Investigating Undergraduate Science Students' Conceptions and Misconceptions of Ocean Acidification.

PubMed

Danielson, Kathryn I; Tanner, Kimberly D

2015-01-01

Scientific research exploring ocean acidification has grown significantly in past decades. However, little science education research has investigated the extent to which undergraduate science students understand this topic. Of all undergraduate students, one might predict science students to be best able to understand ocean acidification. What conceptions and misconceptions of ocean acidification do these students hold? How does their awareness and knowledge compare across disciplines? Undergraduate biology, chemistry/biochemistry, and environmental studies students, and science faculty for comparison, were assessed on their awareness and understanding. Results revealed low awareness and understanding of ocean acidification among students compared with faculty. Compared with biology or chemistry/biochemistry students, more environmental studies students demonstrated awareness of ocean acidification and identified the key role of carbon dioxide. Novel misconceptions were also identified. These findings raise the question of whether undergraduate science students are prepared to navigate socioenvironmental issues such as ocean acidification. © 2015 K. I. Danielson and K. D. Tanner. CBE—Life Sciences Education © 2015 The American Society for Cell Biology. This article is distributed by The American Society for Cell Biology under license from the author(s). It is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

The Physics of Marine Biology.

ERIC Educational Resources Information Center

Conn, Kathleen

1992-01-01

Discusses ways in which marine biology can be integrated into the physics classroom. Topics suggested for incorporation include the harmonic motion of ocean waves, ocean currents, the interaction of visible light with ocean water, pressure, light absorption, and sound transfer in water. (MDH)

Chemical characterization of detrital sugar chains with peptides in oceanic surface particulate organic matter

NASA Astrophysics Data System (ADS)

Tsukasaki, A.; Nishida, T.; Tanoue, E.

2016-02-01

For better understanding of the dynamics of organic matter in the ocean interior, particulate organic matter (POM) in oceanic surface water is a key material as a starting material in food chain and biological carbon pump, and the source of dissolved organic matter. POM consists of a mixture of non-living POM (detritus) and small amount of living POM (organisms). Particulate combined amino acids (PCAAs) are one of the major components of POM and the most important source of nitrogen and carbon for heterotrophic organisms in marine environments. In our previous studies of molecular-level characterization of PCAAs using electrophoretic separation (SDS-PAGE: sodium dodecyl sulfate-polyacrylamide gel electrophoresis) with specific detection of protein/peptide and sugar chains, we reported that most of PCAAs existed as small-sized peptide chains with carbohydrate-rich remnants. Although carbohydrates are one of the major carbon components of POM, the details of molecular-level structures including sugar chains are unknown. In this study, we applied electrophoretic separation for sugar chains (FACE: fluorophore-assisted carbohydrate electrophoresis) to the POM samples collected from the surface water of the Pacific Ocean. The results showed that sugar chains with various degree of polymerization were detected in POM. The possible roles of such sugar chains in marine biogeochemical cycle of organic matter are discussed in the presentation.

Dynamic ocean topography from CryoSat-2: examining recent changes in ice-ocean stress and advancing a theory for Beaufort Gyre stabilization

NASA Astrophysics Data System (ADS)

Dewey, S.; Morison, J.; Kwok, R.; Dickinson, S.; Morison, D.; Andersen, R.

2017-12-01

Model and sparse observational evidence has shown the ocean current speed in the Beaufort Gyre to have increased and recently stabilized. However, full-basin altimetric observations of dynamic ocean topography (DOT) and ocean surface currents have yet to be applied to the dynamics of gyre stabilization. DOT fields from retracked CryoSat-2 retrievals in Arctic Ocean leads have enabled us to calculate 2-month average ocean geostrophic currents. These currents are crucial to accurately computing ice-ocean stress, especially because they have accelerated so that their speed rivals that of the overlying sea ice. Given these observations, we can shift our view of the Beaufort Gyre as a system in which the wind drives the ice and the ice drives a passive ocean to a system with the following feedback: After initial input of energy by wind, ice velocity decreases due to water drag and internal ice stress and the ocean drives the ice, reversing Ekman pumping and decelerating the gyre. This reversal changes the system from a persistently convergent regime to one in which freshwater is released from the gyre and doming of the gyre decreases, without any change in long-term average wind stress curl. Through these processes, the ice-ocean stress provides a key feedback in Beaufort Gyre stabilization.

Millennial-scale variability in dust deposition, marine export production, and nutrient consumption in the glacial subantarctic ocean (Invited)

NASA Astrophysics Data System (ADS)

Martinez-Garcia, A.; Sigman, D. M.; Anderson, R. F.; Ren, H. A.; Hodell, D. A.; Straub, M.; Jaccard, S.; Eglinton, T. I.; Haug, G. H.

2013-12-01

Based on the limitation of modern Southern Ocean phytoplankton by iron and the evidence of higher iron-bearing dust fluxes to the ocean during ice ages, it has been proposed that iron fertilization of Southern Ocean phytoplankton contributed to the reduction in atmospheric CO2 during ice ages. In the Subantarctic zone of the Atlantic Southern Ocean, glacial increases in dust flux and export production have been documented, supporting the iron fertilization hypothesis. However, these observations could be interpreted alternatively as resulting from the equatorward migration of Southern Ocean fronts during ice ages if the observed productivity rise was not accompanied by an increase in major nutrient consumption. Here, new 230Th-normalized lithogenic and opal fluxes are combined with high-resolution biomarker measurements to reconstruct millennial-scale changes in dust deposition and marine export production in the subantarctic Atlantic over the last glacial cycle. In the same record foraminifera-bound nitrogen isotopes are used to reconstruct ice age changes in surface nitrate utilization, providing a comprehensive test of the iron fertilization hypothesis. Elevation in foraminifera-bound δ15N, indicating more complete nitrate consumption, coincides with times of surface cooling and greater dust flux and export production. These observations indicate that the ice age Subantarctic was characterized by iron fertilized phytoplankton growth. The resulting strengthening of the Southern Ocean's biological pump can explain the ~40 ppm lowering of CO2 that characterizes the transitions from mid-climate states to full ice age conditions as well as the millennial-scale atmospheric CO2 fluctuations observed within the last ice age

Iron fertilisation and century-scale effects of open ocean dissolution of olivine in a simulated CO2 removal experiment

NASA Astrophysics Data System (ADS)

Hauck, Judith; Köhler, Peter; Wolf-Gladrow, Dieter; Völker, Christoph

2016-02-01

Carbon dioxide removal (CDR) approaches are efforts to reduce the atmospheric CO2 concentration. Here we use a marine carbon cycle model to investigate the effects of one CDR technique: the open ocean dissolution of the iron-containing mineral olivine. We analyse the maximum CDR potential of an annual dissolution of 3 Pg olivine during the 21st century and focus on the role of the micro-nutrient iron for the biological carbon pump. Distributing the products of olivine dissolution (bicarbonate, silicic acid, iron) uniformly in the global surface ocean has a maximum CDR potential of 0.57 gC/g-olivine mainly due to the alkalinisation of the ocean, with a significant contribution from the fertilisation of phytoplankton with silicic acid and iron. The part of the CDR caused by ocean fertilisation is not permanent, while the CO2 sequestered by alkalinisation would be stored in the ocean as long as alkalinity is not removed from the system. For high CO2 emission scenarios the CDR potential due to the alkalinity input becomes more efficient over time with increasing ocean acidification. The alkalinity-induced CDR potential scales linearly with the amount of olivine, while the iron-induced CDR saturates at 113 PgC per century (on average ˜ 1.1 PgC yr-1) for an iron input rate of 2.3 Tg Fe yr-1 (1% of the iron contained in 3 Pg olivine). The additional iron-related CO2 uptake occurs in the Southern Ocean and in the iron-limited regions of the Pacific. Effects of this approach on surface ocean pH are small (\\lt 0.01).

Disciplinary reporting affects the interpretation of climate change impacts in global oceans.

PubMed

Hauser, Donna D W; Tobin, Elizabeth D; Feifel, Kirsten M; Shah, Vega; Pietri, Diana M

2016-01-01

Climate change is affecting marine ecosystems, but different investigative approaches in physical, chemical, and biological disciplines may influence interpretations of climate-driven changes in the ocean. Here, we review the ocean change literature from 2007 to 2012 based on 461 of the most highly cited studies in physical and chemical oceanography and three biological subdisciplines. Using highly cited studies, we focus on research that has shaped recent discourse on climate-driven ocean change. Our review identified significant differences in spatial and temporal scales of investigation among disciplines. Physical/chemical studies had a median duration of 29 years (n = 150) and covered the greatest study areas (median 1.41 × 10(7) km(2) , n = 148). Few biological studies were conducted over similar spatial and temporal scales (median 8 years, n = 215; median 302 km(2) , n = 196), suggesting a more limited ability to separate climate-related responses from natural variability. We linked physical/chemical and biological disciplines by tracking studies examining biological responses to changing ocean conditions. Of the 545 biological responses recorded, a single physical or chemical stressor was usually implicated as the cause (59%), with temperature as the most common primary stressor (44%). The most frequently studied biological responses were changes in physiology (31%) and population abundance (30%). Differences in disciplinary studies, as identified in this review, can ultimately influence how researchers interpret climate-related impacts in marine systems. We identified research gaps and the need for more discourse in (1) the Indian and other Southern Hemisphere ocean basins; (2) research themes such as archaea, bacteria, viruses, mangroves, turtles, and ocean acidification; (3) physical and chemical stressors such as dissolved oxygen, salinity, and upwelling; and (4) adaptive responses of marine organisms to climate-driven ocean change. Our findings reveal

Midlatitude atmosphere-ocean interaction during El Nino. Part I. The north Pacific ocean

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alexander, M.A.

Atmosphere-ocean modeling experiments are used to investigate the formation of sea surface temperature (SST) anomalies in the North Pacific Ocean during fall and winter of the El Nino year. Experiments in which the NCAR Community Climate Model (CCM) surface fields are used to force a mixed-layer ocean model in the North Pacific (no air-sea feedback) are compared to simulations in which the CCM and North Pacific Ocean model are coupled. Anomalies in the atmosphere and the North Pacific Ocean during El Nino are obtained from the difference between simulations with and without prescribed warm SST anomalies in the tropical Pacific.more » In both the forced and coupled experiments, the anomaly pattern resembles a composite of the actual SST anomaly field during El Nino: warm SSTs develop along the coast of North America and cold SSTs form in the central Pacific. In the coupled simulations, air-sea interaction results in a 25% to 50% reduction in the magnitude of the SST and mixed-layer depth anomalies, resulting in more realistic SST fields. Coupling also decreases the SST anomaly variance; as a result, the anomaly centers remain statistically significant even though the magnitude of the anomalies is reduced. Three additional sensitivity studies indicate that air-sea feedback and entrainment act to damp SST anomalies while Ekman pumping has a negligible effect on mixed-layer depth and SST anomalies in midatitudes.« less

Fluid pumping using magnetic cilia

NASA Astrophysics Data System (ADS)

Hanasoge, Srinivas; Ballard, Matt; Alexeev, Alexander; Hesketh, Peter; Woodruff School of Mechanical Engineering Team

2016-11-01

Using experiments and computer simulations, we examine fluid pumping by artificial magnetic cilia fabricated using surface micromachining techniques. An asymmetry in forward and recovery strokes of the elastic cilia causes the net pumping in a creeping flow regime. We show this asymmetry in the ciliary strokes is due to the change in magnetization of the elastic cilia combined with viscous force due to the fluid. Specifically, the time scale for forward stroke is mostly governed by the magnetic forces, whereas the time scale for the recovery stroke is determined by the elastic and viscous forces. These different time scales result in different cilia deformation during forward and backward strokes which in turn lead to the asymmetry in the ciliary motion. To disclose the physics of magnetic cilia pumping we use a hybrid lattice Boltzmann and lattice spring method. We validate our model by comparing the simulation results with the experimental data. The results of our study will be useful to design microfluidic systems for fluid mixing and particle manipulation including different biological particles. USDA and NSF.

Biodiversity's big wet secret: the global distribution of marine biological records reveals chronic under-exploration of the deep pelagic ocean.

PubMed

Webb, Thomas J; Vanden Berghe, Edward; O'Dor, Ron

2010-08-02

Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean--the largest biome on Earth--is chronically under-represented in global databases of marine biodiversity. We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem.

Biodiversity's Big Wet Secret: The Global Distribution of Marine Biological Records Reveals Chronic Under-Exploration of the Deep Pelagic Ocean

PubMed Central

Webb, Thomas J.; Vanden Berghe, Edward; O'Dor, Ron

2010-01-01

Background Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean – the largest biome on Earth – is chronically under-represented in global databases of marine biodiversity. Methodology/Principal Findings We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. Conclusions/Significance The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem. PMID:20689845

Revealing and analyzing networks of environmental systems

NASA Astrophysics Data System (ADS)

Eveillard, D.; Bittner, L.; Chaffron, S.; Guidi, L.; Raes, J.; Karsenti, E.; Bowler, C.; Gorsky, G.

2015-12-01

Understanding the interactions between microbial communities and their environment well enough to be able to predict diversity on the basis of physicochemical parameters is a fundamental pursuit of microbial ecology that still eludes us. However, modeling microbial communities is a complicated task, because (i) communities are complex, (ii) most are described qualitatively, and (iii) quantitative understanding of the way communities interacts with their surroundings remains incomplete. Within this seminar, we will illustrate two complementary approaches that aim to overcome these points in different manners. First, we will present a network analysis that focus on the biological carbon pump in the global ocean. The biological carbon pump is the process by which photosynthesis transforms CO2 to organic carbon sinking to the deep-ocean as particles where it is sequestered. While the intensity of the pump correlate to plankton community composition, the underlying ecosystem structure and interactions driving this process remain largely uncharacterized Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve understanding of these drivers. We show that specific plankton communities correlate with carbon export and highlight unexpected and overlooked taxa such as Radiolaria, alveolate parasites and bacterial pathogens, as well as Synechococcus and their phages, as key players in the biological pump. Additionally, we show that the abundances of just a few bacterial and viral genes predict most of the global ocean carbon export's variability. Together these findings help elucidate ecosystem drivers of the biological carbon pump and present a case study for scaling from genes-to-ecosystems. Second, we will show preliminary results on a probabilistic modeling that predicts microbial community structure across observed physicochemical data, from a putative network and partial quantitative knowledge. This modeling shows that, despite

Molecular Diversity of Sea Spray Aerosol Particles: Impact of Ocean Biology on Particle Composition and Hygroscopicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cochran, Richard E.; Laskina, Olga; Trueblood, Jonathan V.

The impact of sea spray aerosol (SSA) on climate depends on the size and chemical composition of individual particles that make-up the total SSA ensemble. While the organic fraction of SSA has been characterized from a bulk perspective, there remains a lack of understanding as to the composition of individual particles within the SSA ensemble. To better understand the molecular components within SSA particles and how SSA composition changes with ocean biology, simultaneous measurements of seawater and SSA were made during a month-long mesocosm experiment performed in an ocean-atmosphere facility. Herein, we deconvolute the composition of freshly emitted SSA devoidmore » of anthropogenic and terrestrial influences by characterizing classes of organic compounds as well as specific molecules within individual SSA particles. Analysis of SSA particles show that the diversity of molecules within the organic fraction varies between two size fractions (submicron and supermicron) with contributions from fatty acids, monosaccharides, polysaccharides and siliceous material. Significant changes in the distribution of these compounds within individual particles are observed to coincide with the rise and fall of phytoplankton and bacterial populations within the seawater. Furthermore, water uptake is impacted as shown by hygroscopicity measurements of model systems composed of representative organic compounds. Thus, the how changes in the hygroscopic growth of SSA evolves with composition can be elucidated. Overall, this study provides an important connection between biological processes that control the composition of seawater and changes in single particle composition which will enhances our ability to predict the impact of SSA on climate.« less

Does biological intimacy shape ecological network structure? A test using a brood pollination mutualism on continental and oceanic islands.

PubMed

Hembry, David H; Raimundo, Rafael L G; Newman, Erica A; Atkinson, Lesje; Guo, Chang; Guimarães, Paulo R; Gillespie, Rosemary G

2018-04-25

Biological intimacy-the degree of physical proximity or integration of partner taxa during their life cycles-is thought to promote the evolution of reciprocal specialization and modularity in the networks formed by co-occurring mutualistic species, but this hypothesis has rarely been tested. Here, we test this "biological intimacy hypothesis" by comparing the network architecture of brood pollination mutualisms, in which specialized insects are simultaneously parasites (as larvae) and pollinators (as adults) of their host plants to that of other mutualisms which vary in their biological intimacy (including ant-myrmecophyte, ant-extrafloral nectary, plant-pollinator and plant-seed disperser assemblages). We use a novel dataset sampled from leafflower trees (Phyllanthaceae: Phyllanthus s. l. [Glochidion]) and their pollinating leafflower moths (Lepidoptera: Epicephala) on three oceanic islands (French Polynesia) and compare it to equivalent published data from congeners on continental islands (Japan). We infer taxonomic diversity of leafflower moths using multilocus molecular phylogenetic analysis and examine several network structural properties: modularity (compartmentalization), reciprocality (symmetry) of specialization and algebraic connectivity. We find that most leafflower-moth networks are reciprocally specialized and modular, as hypothesized. However, we also find that two oceanic island networks differ in their modularity and reciprocal specialization from the others, as a result of a supergeneralist moth taxon which interacts with nine of 10 available hosts. Our results generally support the biological intimacy hypothesis, finding that leafflower-moth networks (usually) share a reciprocally specialized and modular structure with other intimate mutualisms such as ant-myrmecophyte symbioses, but unlike nonintimate mutualisms such as seed dispersal and nonintimate pollination. Additionally, we show that generalists-common in nonintimate mutualisms-can also

Fresh Water Content Variability in the Arctic Ocean

NASA Technical Reports Server (NTRS)

Hakkinen, Sirpa; Proshutinsky, Andrey

2003-01-01

Arctic Ocean model simulations have revealed that the Arctic Ocean has a basin wide oscillation with cyclonic and anticyclonic circulation anomalies (Arctic Ocean Oscillation; AOO) which has a prominent decadal variability. This study explores how the simulated AOO affects the Arctic Ocean stratification and its relationship to the sea ice cover variations. The simulation uses the Princeton Ocean Model coupled to sea ice. The surface forcing is based on NCEP-NCAR Reanalysis and its climatology, of which the latter is used to force the model spin-up phase. Our focus is to investigate the competition between ocean dynamics and ice formation/melt on the Arctic basin-wide fresh water balance. We find that changes in the Atlantic water inflow can explain almost all of the simulated fresh water anomalies in the main Arctic basin. The Atlantic water inflow anomalies are an essential part of AOO, which is the wind driven barotropic response to the Arctic Oscillation (AO). The baroclinic response to AO, such as Ekman pumping in the Beaufort Gyre, and ice meldfreeze anomalies in response to AO are less significant considering the whole Arctic fresh water balance.

Using Ocean Exploration in the Atlantic Canyons to Advance Conversations about Transatlantic Ocean Literacy

NASA Astrophysics Data System (ADS)

Keener, P.; Tuddenham, P. T.; Bishop, T.

2016-02-01

The National Oceanic and Atmospheric Administration (NOAA) Ship Okeanos Explorer spent the 2013 field season exploring a wide variety of seafloor features and biological communities in and between largely unexplored canyons in the Northeast Atlantic Ocean, revealing hot spots for biodiversity and providing new information about how these canyons change over time. During the expeditions, an interdisciplinary team of scientists from dozens of institutions and multiple sectors together with ocean educators and the public were able to observe via telepresence the deep Atlantic using NOAA's new remotely-operated vehicle Deep Discoverer. In a collaboration between the NOAA Office of Ocean Exploration and Research and The College of Exploration, along with partners in Canada and the European Union (EU), key exploration findings from the NOAA Ship Okeanos Explorer 2013 field season were designed into an online workshop in which 640 educators, scientists, government representatives, policy makers, and other interested stakeholders representing 40 states within the U.S. and 29 countries participated. The five-week long online offering, titled Deepwater Explorations in the North Atlantic Onboard the NOAA Ship Okeanos Explorer…Online Conversations to Advance Transatlantic Ocean Literacy, built upon the telepresence experience and served as a foundation for extending conversations begun approximately a year earlier on transatlantic ocean literacy, as called for in The Galway Statement. Scientific experts from the U.S., Canada, and the EU provided keynote addresses on deep-sea corals, methane seeps, deep-water canyons, seamounts, and biological diversity in this important area of our "shared Atlantic Ocean." This session will socialize key findings of the workshop based on an evaluation conducted at the conclusion of the workshop and offers insight into how online learning communities can advance ocean literacy and scientific understanding in support of The Galway Statement.

Method And System For Examining Biological Materials Using Low Power Cw Excitation Raman Spectroscopy.

DOEpatents

Alfano, Robert R.; Wang, Wubao

2003-05-06

A method and system for examining biological materials using low-power cw excitation Raman spectroscopy. A low-power continuous wave (cw) pump laser beam and a low-power cw Stokes (or anti-Stokes) probe laser beam simultaneously illuminate a biological material and traverse the biological material in collinearity. The pump beam, whose frequency is varied, is used to induce Raman emission from the biological material. The intensity of the probe beam, whose frequency is kept constant, is monitored as it leaves the biological material. When the difference between the pump and probe excitation frequencies is equal to a Raman vibrational mode frequency of the biological material, the weak probe signal becomes amplified by one or more orders of magnitude (typically up to about 10.sup.4 -10.sup.6) due to the Raman emission from the pump beam. In this manner, by monitoring the intensity of the probe beam emitted from the biological material as the pump beam is varied in frequency, one can obtain an excitation Raman spectrum for the biological material tested. The present invention may be applied to in the in vivo and/or in vitro diagnosis of diabetes, heart disease, hepatitis, cancers and other diseases by measuring the characteristic excitation Raman lines of blood glucose, cholesterol, serum glutamic oxalacetic transaminase (SGOT)/serum glutamic pyruvic transaminase (SGPT), tissues and other corresponding Raman-active body constituents, respectively.

Requirements for an Advanced Ocean Radiometer

NASA Technical Reports Server (NTRS)

Meister, Gerhard; McClain, Charles R.; Ahmad, Ziauddin; Bailey, Sean W.; Barnes, Robert A.; Brown, Steven; Eplee, Robert E.; Franz, Bryan; Holmes, Alan; Monosmith, W. Bryan;

Southern Ocean Mixed-Layer Seasonal and Interannual Variations From Combined Satellite and In Situ Data

NASA Astrophysics Data System (ADS)

Buongiorno Nardelli, B.; Guinehut, S.; Verbrugge, N.; Cotroneo, Y.; Zambianchi, E.; Iudicone, D.

2017-12-01

The depth of the upper ocean mixed layer provides fundamental information on the amount of seawater that directly interacts with the atmosphere. Its space-time variability modulates water mass formation and carbon sequestration processes related to both the physical and biological pumps. These processes are particularly relevant in the Southern Ocean, where surface mixed-layer depth estimates are generally obtained either as climatological fields derived from in situ observations or through numerical simulations. Here we demonstrate that weekly observation-based reconstructions can be used to describe the variations of the mixed-layer depth in the upper ocean over a range of space and time scales. We compare and validate four different products obtained by combining satellite measurements of the sea surface temperature, salinity, and dynamic topography and in situ Argo profiles. We also compute an ensemble mean and use the corresponding spread to estimate mixed-layer depth uncertainties and to identify the more reliable products. The analysis points out the advantage of synergistic approaches that include in input the sea surface salinity observations obtained through a multivariate optimal interpolation. Corresponding data allow to assess mixed-layer depth seasonal and interannual variability. Specifically, the maximum correlations between mixed-layer anomalies and the Southern Annular Mode are found at different time lags, related to distinct summer/winter responses in the Antarctic Intermediate Water and Sub-Antarctic Mode Waters main formation areas.

Millennial-scale plankton regime shifts in the subtropical North Pacific Ocean.

PubMed

McMahon, Kelton W; McCarthy, Matthew D; Sherwood, Owen A; Larsen, Thomas; Guilderson, Thomas P

2015-12-18

Climate change is predicted to alter marine phytoplankton communities and affect productivity, biogeochemistry, and the efficacy of the biological pump. We reconstructed high-resolution records of changing plankton community composition in the North Pacific Ocean over the past millennium. Amino acid-specific δ(13)C records preserved in long-lived deep-sea corals revealed three major plankton regimes corresponding to Northern Hemisphere climate periods. Non-dinitrogen-fixing cyanobacteria dominated during the Medieval Climate Anomaly (950-1250 Common Era) before giving way to a new regime in which eukaryotic microalgae contributed nearly half of all export production during the Little Ice Age (~1400-1850 Common Era). The third regime, unprecedented in the past millennium, began in the industrial era and is characterized by increasing production by dinitrogen-fixing cyanobacteria. This picoplankton community shift may provide a negative feedback to rising atmospheric carbon dioxide concentrations. Copyright © 2015, American Association for the Advancement of Science.

The Coastal Ocean Prediction Systems program: Understanding and managing our coastal ocean

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eden, H.F.; Mooers, C.N.K.

1990-06-01

The goal of COPS is to couple a program of regular observations to numerical models, through techniques of data assimilation, in order to provide a predictive capability for the US coastal ocean including the Great Lakes, estuaries, and the entire Exclusive Economic Zone (EEZ). The objectives of the program include: determining the predictability of the coastal ocean and the processes that govern the predictability; developing efficient prediction systems for the coastal ocean based on the assimilation of real-time observations into numerical models; and coupling the predictive systems for the physical behavior of the coastal ocean to predictive systems for biological,more » chemical, and geological processes to achieve an interdisciplinary capability. COPS will provide the basis for effective monitoring and prediction of coastal ocean conditions by optimizing the use of increased scientific understanding, improved observations, advanced computer models, and computer graphics to make the best possible estimates of sea level, currents, temperatures, salinities, and other properties of entire coastal regions.« less

Impacts of the Mesoscale Ocean-Atmosphere Coupling on the Peru-Chile Ocean Dynamics: The Current-Induced Wind Stress Modulation

NASA Astrophysics Data System (ADS)

Oerder, V.; Colas, F.; Echevin, V.; Masson, S.; Lemarié, F.

2018-02-01

The ocean dynamical responses to the surface current-wind stress interaction at the oceanic mesoscale are investigated in the South-East Pacific using a high-resolution regional ocean-atmosphere coupled model. Two simulations are compared: one includes the surface current in the wind stress computation while the other does not. In the coastal region, absolute wind velocities are different between the two simulations but the wind stress remains very similar. As a consequence, the mean regional oceanic circulation is almost unchanged. On the contrary, the mesoscale activity is strongly reduced when taking into account the effect of the surface current on the wind stress. This is caused by a weakening of the eddy kinetic energy generation near the coast by the wind work and to intensified offshore eddy damping. We show that, above coherent eddies, the current-stress interaction generates eddy damping through Ekman pumping and eddy kinetic energy dissipation through wind work. This alters significantly the coherent eddy vertical structures compared with the control simulation, weakening the temperature and vorticity anomalies and increasing strongly the vertical velocity anomalies associated to eddies.

Calcareous nannoplankton assemblages across the Pliocene-Pleistocene transition in the southwestern Indian Ocean, IODP Site U1475

NASA Astrophysics Data System (ADS)

Cares, Z.; Farr, C. L.; LeVay, L.; Tangunan, D.; Brentegani, L.

2017-12-01

International Ocean Discovery Program (IODP) Expedition 361 cored six sites along the greater Agulhas Current System to track its intensity through time and to better understand its role in global oceanic circulation and climate. One of the main scientific objectives of this expedition was to determine the dynamics of the Indian-Atlantic Ocean Gateway circulation during Pliocene-Pleistocene climate changes in association with changing wind fields and migrating ocean fronts. The Indian-Atlantic Ocean Gateway contains a pronounced oceanic frontal system, the position of which has the potential to influence global climate on millennial scales. Owing to the physical differences between the frontal zones, this region has complex biogeochemistry, changes in phytoplankton distribution, and variations in primary productivity. Site U1475 was cored on the Agulhas Plateau in the Southwestern Indian Ocean and recovered a complete sequence of calcareous ooze spanning the last 7 Ma. Previous studies at this locality have shown latitudinal migrations of the frontal zones over the past 350 kyr that resulted in prominent millennial shifts in primary production, biological pump efficiency, and microfossil assemblages that coincide with Antarctic climate variability. Here we present initial results comprised of calcareous nannoplankton assemblages in order to test if similar latitudinal frontal migrations occurred during the Pliocene-Pleistocene transition (PPT; 2.7 Ma). The calcareous nannoplankton assemblage shows an abundance increase of taxa associated with cooler water and higher primary production across the PPT interval. In addition to a change in species abudance, the Shannon diversity index drops notably across the transition, which is typical of nannoplankton communities in more productive regions. These data suggest that a long-term change in sea surface temperature and nutrient availability took place across the PPT, potentially linked to the northward migration of

Decoupling of Iron and Phosphate in the Global Ocean

NASA Technical Reports Server (NTRS)

Parekh, Payal

2003-01-01

Iron is an essential micronutrient for marine phytoplankton, limiting their growth in high nutrient, low chlorophyll regions of the ocean. I use a hierarchy of ocean circulation and biogeochemistry models to understand controls on global iron distribution. I formulate a mechanistic model of iron cycling which includes scavenging onto sinking particles and complexation with an organic ligand. The iron cycle is coupled to a phosphorus cycling model. Iron's aeolian source is prescribed. In the context of a highly idealized multi-box model scheme, the model can be brought into consistency with the relatively sparse ocean observations of iron in the oceans. This biogeochemical scheme is also implemented in a coarse resolution ocean general circulation model. This model also successfully reproduces the broad regional patterns of iron and phosphorus. In particular, the high macronutrient concentrations of the Southern Ocean result from iron limitation in the model. Due to the potential ability of iron to change the efficiency of the carbon pump in the remote Southern Ocean, I study Southern Ocean surface phosphate response to increased aeolian dust flux. My box model and GCM results suggest that a global ten fold increase in dust flux can support a phosphate drawdown of 0.25-0.5 micromolar.

Peristaltic pump-based low range pressure sensor calibration system

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vinayakumar, K. B.; Department of Electronic Systems Engineering, Indian Institute of Science, Bangalore 5600012; Naveen Kumar, G.

2015-11-15

Peristaltic pumps were normally used to pump liquids in several chemical and biological applications. In the present study, a peristaltic pump was used to pressurize the chamber (positive as well negative pressures) using atmospheric air. In the present paper, we discuss the development and performance study of an automatic pressurization system to calibrate low range (millibar) pressure sensors. The system includes a peristaltic pump, calibrated pressure sensor (master sensor), pressure chamber, and the control electronics. An in-house developed peristaltic pump was used to pressurize the chamber. A closed loop control system has been developed to detect and adjust the pressuremore » leaks in the chamber. The complete system has been integrated into a portable product. The system performance has been studied for a step response and steady state errors. The system is portable, free from oil contaminants, and consumes less power compared to existing pressure calibration systems. The veracity of the system was verified by calibrating an unknown diaphragm based pressure sensor and the results obtained were satisfactory.« less

Peristaltic pump-based low range pressure sensor calibration system

NASA Astrophysics Data System (ADS)

Vinayakumar, K. B.; Naveen Kumar, G.; Nayak, M. M.; Dinesh, N. S.; Rajanna, K.

2015-11-01

Peristaltic pumps were normally used to pump liquids in several chemical and biological applications. In the present study, a peristaltic pump was used to pressurize the chamber (positive as well negative pressures) using atmospheric air. In the present paper, we discuss the development and performance study of an automatic pressurization system to calibrate low range (millibar) pressure sensors. The system includes a peristaltic pump, calibrated pressure sensor (master sensor), pressure chamber, and the control electronics. An in-house developed peristaltic pump was used to pressurize the chamber. A closed loop control system has been developed to detect and adjust the pressure leaks in the chamber. The complete system has been integrated into a portable product. The system performance has been studied for a step response and steady state errors. The system is portable, free from oil contaminants, and consumes less power compared to existing pressure calibration systems. The veracity of the system was verified by calibrating an unknown diaphragm based pressure sensor and the results obtained were satisfactory.

Biogeochemical linkage between atmosphere and ocean in the eastern equatorial Pacific Ocean: Results from the EqPOS research cruise

NASA Astrophysics Data System (ADS)

Furutani, H.; Inai, Y.; Aoki, S.; Honda, H.; Omori, Y.; Tanimoto, H.; Iwata, T.; Ueda, S.; Miura, K.; Uematsu, M.

2012-12-01

Eastern equatorial Pacific Ocean is a unique oceanic region from several biogeochemical points of view. It is a remote open ocean with relatively high marine biological activity, which would result in limited influence of human activity but enhanced effect of marine natural processes on atmospheric composition. It is also characterized as high nutrient low chlorophyll (HNLC) ocean, in which availability of trace metals such as iron and zinc limits marine primary production and thus atmospheric deposition of these trace elements to the ocean surface is expected to play an important role in regulating marine primary production and defining unique microbial community. High sea surface temperature in the region generates strong vertical air convection which efficiently brings tropospheric atmospheric composition into stratosphere. In this unique eastern equatorial Pacific Ocean, EqPOS (Equatorial Pacific Ocean and Stratospheric/Tropospheric Atmospheric Study) research cruise was organized as a part of SOLAS Japan activity to understand biogeochemical ocean-atmospheric interaction in the region. Coordinated atmospheric, oceanic, and marine biological observations including sampling/characterization of thin air-sea interfacial layer (sea surface microlayer: SML) and launching large stratospheric air sampling balloons were carried out on-board R/V Hakuho Maru starting from 29 January for 39 days. Biogeochemically important trace/long-lived gases such as CO2, dimethyl sulfide (DMS), and some volatile organic carbons (VOCs) both in the atmosphere and seawater were continuously monitored and their air-sea fluxes were also observed using gradient and eddy-covariance techniques. Atmospheric gas measurement of CO2, CH4, N2O, SF6, CO, H2, Ar and isotopic composition of selected gases were further extended to stratospheric air by balloon-born sampling in addition to a vertical profiling of O3, CO2, and H2O with sounding sondes. Physical and chemical properties of marine

Acoustic Pump

NASA Technical Reports Server (NTRS)

Heyman, Joseph S.

1993-01-01

Pump uses acoustic-radiation forces. Momentum transferred from sound waves to sound-propagating material in way resulting in net pumping action on material. Acoustic pump is solid-state pump. Requires no moving parts, entirely miniaturized, and does not invade pumped environment. Silent, with no conventional vibration. Used as pump for liquid, suspension, gas, or any other medium interacting with radiation pressure. Also used where solid-state pump needed for reliability and controllability. In microgravity environment, device offers unusual control for low flow rates. For medical or other applications in which contamination cannot be allowed, offers noninvasive pumping force.

Seychelles Dome variability in a high resolution ocean model

NASA Astrophysics Data System (ADS)

Nyadjro, E. S.; Jensen, T.; Richman, J. G.; Shriver, J. F.

2016-02-01

The Seychelles-Chagos Thermocline Ridge (SCTR; 5ºS-10ºS, 50ºE-80ºE) in the tropical Southwest Indian Ocean (SWIO) has been recognized as a region of prominence with regards to climate variability in the Indian Ocean. Convective activities in this region have regional consequences as it affect socio-economic livelihood of the people especially in the countries along the Indian Ocean rim. The SCTR is characterized by a quasi-permanent upwelling that is often associated with thermocline shoaling. This upwelling affects sea surface temperature (SST) variability. We present results on the variability and dynamics of the SCTR as simulated by the 1/12º high resolution HYbrid Coordinate Ocean Model (HYCOM). It is observed that locally, wind stress affects SST via Ekman pumping of cooler subsurface waters, mixing and anomalous zonal advection. Remotely, wind stress curl in the eastern equatorial Indian Ocean generates westward-propagating Rossby waves that impacts the depth of the thermocline which in turn impacts SST variability in the SCTR region. The variability of the contributions of these processes, especially with regard to the Indian Ocean Dipole (IOD) are further examined. In a typical positive IOD (PIOD) year, the net vertical velocity in the SCTR is negative year-round as easterlies along the region are intensified leading to a strong positive curl. This vertical velocity is caused mainly by anomalous local Ekman downwelling (with peak during September-November), a direct opposite to the climatology scenario when local Ekman pumping is positive (upwelling favorable) year-round. The anomalous remote contribution to the vertical velocity changes is minimal especially during the developing and peak stages of PIOD events. In a typical negative IOD (NIOD) year, anomalous vertical velocity is positive almost year-round with peaks in May and October. The remote contribution is positive, in contrast to the climatology and most of the PIOD years.

Ocean images in music compositions and folksongs

NASA Astrophysics Data System (ADS)

Liu, C. M.

2017-12-01

In general, ocean study usually ranges from physical oceanography, chemical oceanography, marine biology, marine geology, and other related fields. In addition to pure scientific fields, ocean phenomenon influence not only human mood but also the shaping of local cultures. In this paper, we present some ocean images and concepts appeared in music compositions and folksongs to show the mixing, influence and interaction between them. This may give a novel way not for science teachers but also music teachers to deliver the knowledge of ocean science in classes.

PUMP CONSTRUCTION

DOEpatents

Strickland, G.; Horn, F.L.; White, H.T.

1960-09-27

A pump which utilizes the fluid being pumped through it as its lubricating fluid is described. This is achieved by means of an improved bearing construction in a pump of the enclosed or canned rotor type. At the outlet end of the pump, adjacent to an impeller mechanism, there is a bypass which conveys some of the pumped fluid to a chamber at the inlet end of the pump. After this chamber becomes full, the pumped fluid passes through fixed orifices in the top of the chamber and exerts a thrust on the inlet end of the pump rotor. Lubrication of the rotor shaft is accomplished by passing the pumped fluid through a bypass at the outlet end of the rotor shaft. This bypass conveys Pumped fluid to a cooling means and then to grooves on the surface of the rotor shait, thus lubricating the shaft.

Iron fertilization of the Subantarctic Ocean during the last ice age

NASA Astrophysics Data System (ADS)

Martinez-Garcia, A.

2015-12-01

Dust has the potential to modify global climate by influencing the radiative balance of the atmosphere and by supplying iron and other essential limiting micronutrients to the ocean. The scarcity of iron limits marine productivity and carbon uptake in one-quarter of the world ocean where the concentration of major nutrients (phosphorus and nitrogen) is perennially high. The Southern Ocean is the region where variations in iron availability can have the largest effect on Earth's carbon cycle through its fertilizing effect on marine ecosystems. Paleoceanographic records from the Subantarctic Atlantic have revealed a remarkable correlation between phytoplankton productivity and aeolian iron flux during glacial periods supporting the iron fertilization hypothesis. In addition, a recent study has shown that peak glacial times and millennial cold events were nearly universally associated not only with increases in dust flux and export production, but also with an increase in nutrient consumption (the last indicated by higher foraminifera-bound δ15N) (Martinez-Garcia et al. 2014). This combination of changes is uniquely consistent with ice age iron fertilization of the Subantarctic Atlantic. The strengthening of the biological pump associated with the observed increase in Subantarctic nutrient consumption during the high-dust intervals of the last two ice ages can explain up to ~40 ppm of the CO2 decrease that characterizes the transitions from mid-climate states to full ice age conditions. However, the impact of iron fertilization in other sectors of the Southern Ocean characterized by lower ice age dust fluxes than the Atlantic remains unclear. A series of recently published records from the Subantarctic Pacific indicate that dust deposition and marine export production were three times higher during glacial periods than during interglacials (Lamy et al. 2014). Here we present new measurements of foraminifera-bound nitrogen isotopes in a sediment core located in the

Turbulent Control Of The Ocean Surface Boundary Layer During The Onset Of Seasonal Stratification

NASA Astrophysics Data System (ADS)

Palmer, M.; Hopkins, J.; Wihsgott, J. U.

2016-02-01

To provide accurate predictions of global carbon cycles we must first understand the mechanistic control of ocean surface boundary layer (OSBL) temperature and the timing and depth of ocean thermal stratification, which are critical controls on oceanic carbon sequestration via the solubility and biological pumps. Here we present an exciting new series of measurements of the fine-scale physical structure and dynamics of the OSBL that provide fresh insight into the turbulent control of upper ocean structure. This study was made in the centre of the Celtic Sea, a broad section of the NW European continental shelf, and represents one of only a handful of measurements of near-surface turbulence in our shelf seas. Data are provided by an ocean microstructure glider (OMG) that delivers estimates of turbulent dissipation rates and mixing from 100m depth to within 2-3m of the sea surface, approximately every 10 minutes and continually for 21 days during April 2015. The OMG successfully captures the onset of spring stratification as solar radiation finally overcomes the destabilising effects of turbulent surface processes. Using coincident meteorological and wave observations from a nearby mooring, and full water column current velocity data we are able to close the near surface energy budget and provide a valuable test for proposed parameterisations of OSBL turbulence based on wind, wave and buoyancy inputs. We verify recent hypotheses that even very subtle thermal stratification, below often assumed limits of 0.1°C, are sufficient to establish sustained stratification even during active surface forcing. We also find that while buoyant production (convection) is not an efficient mechanism for mixing beyond the base of the mixed layer it does play an important role in modification of surface structure, acting to precondition the OSBL for enhanced (deeper) impacts from wind and wave driven turbulence.

Carbonate dissolution in mixed waters due to ocean acidification

NASA Astrophysics Data System (ADS)

Koski, K.; Wilson, J. L.

2009-12-01

Much of the anthropogenically released carbon dioxide has been stored as a dissolved gas in the ocean, causing a 0.1 decrease in ocean surface pH, with models predicting that by 2100 the surface ocean pH will be 0.5 below pre-industrial levels. In mixed ocean water - fresh water environments (e.g. estuaries, coastal aquifers, and edges of ice sheets), the decreased ocean pH couples with the mixed water geochemistry to make water more undersaturated with respect to calcium carbonate than ocean acidification alone. Mixed-water calcite dissolution may be one of the first directly observable effects of ocean acidification, as the ocean water and the fresh water can both be saturated with respect to calcium carbonate while their mixture will be undersaturated. We present a basic quantitative model describing mixed water dissolution in coastal or island freshwater aquifers, using temporally changing ocean pH, sea level, precipitation, and groundwater pumping. The model describes the potential for an increased rate of speleogenesis and porosity/permeability development along the lower edge of a fresh water lens aquifer. The model accounts the indirect effects of rising sea level and a growing coastal population on these processes. Applications are to freshwater carbonate aquifers on islands (e.g. the Bahamas) and in coastal areas (e.g. the unconfined Floridan aquifer of the United States, the Yucatan Peninsula of Mexico).

Investigating Undergraduate Science Students’ Conceptions and Misconceptions of Ocean Acidification

PubMed Central

Danielson, Kathryn I.; Tanner, Kimberly D.

2015-01-01

Scientific research exploring ocean acidification has grown significantly in past decades. However, little science education research has investigated the extent to which undergraduate science students understand this topic. Of all undergraduate students, one might predict science students to be best able to understand ocean acidification. What conceptions and misconceptions of ocean acidification do these students hold? How does their awareness and knowledge compare across disciplines? Undergraduate biology, chemistry/biochemistry, and environmental studies students, and science faculty for comparison, were assessed on their awareness and understanding. Results revealed low awareness and understanding of ocean acidification among students compared with faculty. Compared with biology or chemistry/biochemistry students, more environmental studies students demonstrated awareness of ocean acidification and identified the key role of carbon dioxide. Novel misconceptions were also identified. These findings raise the question of whether undergraduate science students are prepared to navigate socioenvironmental issues such as ocean acidification. PMID:26163563

The Modulation of Biological Production by Oceanic Mesoscale Turbulence

NASA Astrophysics Data System (ADS)

Lévy, Marina

This chapter reviews the current state of knowledge on bio-physical interactions at mesoscale and at sub-mesoscale. It is focused on the mid-latitudes open ocean. From examples taken from my own studies or selected in the literature, I show how high-resolution process-oriented model studies have helped to improve our understanding. I follow a process oriented approach; I first discuss the role of mesoscale eddies in moderating the nutrient flux into the well-lit euphotic zone. Then I address the impact on biogeochemistry of transport occurring on a horizontal scale smaller than the scale of an eddy. I show that submesoscale processes modulate biogeochemical budgets in a number of ways, through intense upwelling of nutrients, subduction of phytoplankton, and horizontal stirring. Finally, I emphasize that mesoscale and submesoscale dynamics have a strong impact on productivity through their influence on the stratification of the surface of the ocean. These processes have in common that they concern the short-term, local effect of oceanic turbulence on biogeochemistry. Efforts are still needed before we can get a complete picture, which would also include the far-field long-term effect of the eddies.

LMFBR with booster pump in pumping loop

DOEpatents

Rubinstein, H.J.

1975-10-14

A loop coolant circulation system is described for a liquid metal fast breeder reactor (LMFBR) utilizing a low head, high specific speed booster pump in the hot leg of the coolant loop with the main pump located in the cold leg of the loop, thereby providing the advantages of operating the main pump in the hot leg with the reliability of cold leg pump operation.

Manifestation, Drivers, and Emergence of Open Ocean Deoxygenation.

PubMed

Levin, Lisa A

2018-01-03

Oxygen loss in the ocean, termed deoxygenation, is a major consequence of climate change and is exacerbated by other aspects of global change. An average global loss of 2% or more has been recorded in the open ocean over the past 50-100 years, but with greater oxygen declines in intermediate waters (100-600 m) of the North Pacific, the East Pacific, tropical waters, and the Southern Ocean. Although ocean warming contributions to oxygen declines through a reduction in oxygen solubility and stratification effects on ventilation are reasonably well understood, it has been a major challenge to identify drivers and modifying factors that explain different regional patterns, especially in the tropical oceans. Changes in respiration, circulation (including upwelling), nutrient inputs, and possibly methane release contribute to oxygen loss, often indirectly through stimulation of biological production and biological consumption. Microbes mediate many feedbacks in oxygen minimum zones that can either exacerbate or ameliorate deoxygenation via interacting nitrogen, sulfur, and carbon cycles. The paleo-record reflects drivers of and feedbacks to deoxygenation that have played out through the Phanerozoic on centennial, millennial, and hundred-million-year timescales. Natural oxygen variability has made it difficult to detect the emergence of a climate-forced signal of oxygen loss, but new modeling efforts now project emergence to occur in many areas in 15-25 years. Continued global deoxygenation is projected for the next 100 or more years under most emissions scenarios, but with regional heterogeneity. Notably, even small changes in oxygenation can have significant biological effects. New efforts to systematically observe oxygen changes throughout the open ocean are needed to help address gaps in understanding of ocean deoxygenation patterns and drivers.

Manifestation, Drivers, and Emergence of Open Ocean Deoxygenation

NASA Astrophysics Data System (ADS)

Levin, Lisa A.

2018-01-01

Oxygen loss in the ocean, termed deoxygenation, is a major consequence of climate change and is exacerbated by other aspects of global change. An average global loss of 2% or more has been recorded in the open ocean over the past 50-100 years, but with greater oxygen declines in intermediate waters (100-600 m) of the North Pacific, the East Pacific, tropical waters, and the Southern Ocean. Although ocean warming contributions to oxygen declines through a reduction in oxygen solubility and stratification effects on ventilation are reasonably well understood, it has been a major challenge to identify drivers and modifying factors that explain different regional patterns, especially in the tropical oceans. Changes in respiration, circulation (including upwelling), nutrient inputs, and possibly methane release contribute to oxygen loss, often indirectly through stimulation of biological production and biological consumption. Microbes mediate many feedbacks in oxygen minimum zones that can either exacerbate or ameliorate deoxygenation via interacting nitrogen, sulfur, and carbon cycles. The paleo-record reflects drivers of and feedbacks to deoxygenation that have played out through the Phanerozoic on centennial, millennial, and hundred-million-year timescales. Natural oxygen variability has made it difficult to detect the emergence of a climate-forced signal of oxygen loss, but new modeling efforts now project emergence to occur in many areas in 15-25 years. Continued global deoxygenation is projected for the next 100 or more years under most emissions scenarios, but with regional heterogeneity. Notably, even small changes in oxygenation can have significant biological effects. New efforts to systematically observe oxygen changes throughout the open ocean are needed to help address gaps in understanding of ocean deoxygenation patterns and drivers.

Quantifying export production in the Southern Ocean: Implications for the Baxs proxy

NASA Astrophysics Data System (ADS)

Hernandez-Sanchez, Maria T.; Mills, Rachel A.; Planquette, HéLèNe; Pancost, Richard D.; Hepburn, Laura; Salter, Ian; Fitzgeorge-Balfour, Tania

2011-12-01

The water column and sedimentary Baxs distribution around the Crozet Plateau is used to decipher the controls and timing of barite formation and to evaluate how export production signals are recorded in sediments underlying a region of natural Fe fertilization within the Fe limited Southern Ocean. Export production estimated from preserved, vertical sedimentary Baxs accumulation rates are compared with published export fluxes assessed from an integrated study of the biological carbon pump to determine the validity of Baxs as a quantitative proxy under different Fe supply conditions typical of the Southern Ocean. Detailed assessment of the geochemical partitioning of Ba in sediments and the lithogenic end-member allows appropriate correction of the bulk Ba content and determination of the Baxs content of sediments and suspended particles. The upper water column distribution of Baxs is extremely heterogeneous spatially and temporally. Organic carbon/Baxs ratios in deep traps from the Fe fertilized region are similar to other oceanic settings allowing quantification of the inferred carbon export based on established algorithms. There appears to be some decoupling of POC and Ba export in the Fe limited region south of the Plateau. The export production across the Crozet Plateau inferred from the Baxs sedimentary proxy indicates that the Fe fertilized area to the north of the Plateau experiences enhanced export relative to equivalent Southern Ocean settings throughout the Holocene and that this influence may also have impacted the site to the south for significant periods. This interpretation is corroborated by alternative productivity proxies (opal accumulation, 231Paxs/230Thxs). Baxs can be used to quantify export production in complex settings such as naturally Fe-fertilized (volcanoclastic) areas, providing appropriate lithogenic correction is undertaken, and sediment focusing is corrected for along with evaluation of barite preservation.

Impact of atmospheric and terrestrial CO2 feedbacks on fertilization-induced marine carbon uptake

NASA Astrophysics Data System (ADS)

Oschlies, A.

2009-08-01

The sensitivity of oceanic CO2 uptake to alterations in the marine biological carbon pump, such as brought about by natural or purposeful ocean fertilization, has repeatedly been investigated by studies employing numerical biogeochemical ocean models. It is shown here that the results of such ocean-centered studies are very sensitive to the assumption made about the response of the carbon reservoirs on the atmospheric side of the sea surface. Assumptions made include prescribed atmospheric pCO2, an interactive atmospheric CO2 pool exchanging carbon with the ocean but not with the terrestrial biosphere, and an interactive atmosphere that exchanges carbon with both oceanic and terrestrial carbon pools. The impact of these assumptions on simulated annual to millennial oceanic carbon uptake is investigated for a hypothetical increase in the C:N ratio of the biological pump and for an idealized enhancement of phytoplankton growth. Compared to simulations with interactive atmosphere, using prescribed atmospheric pCO2 overestimates the sensitivity of the oceanic CO2 uptake to changes in the biological pump, by about 2%, 25%, 100%, and >500% on annual, decadal, centennial, and millennial timescales, respectively. The smaller efficiency of the oceanic carbon uptake under an interactive atmosphere is due to the back flux of CO2 that occurs when atmospheric CO2 is reduced. Adding an interactive terrestrial carbon pool to the atmosphere-ocean model system has a small effect on annual timescales, but increases the simulated fertilization-induced oceanic carbon uptake by about 4%, 50%, and 100% on decadal, centennial, and millennial timescales, respectively, for pCO2 sensitivities of the terrestrial carbon storage in the middle range of the C4MIP models (Friedlingstein et al., 2006). For such sensitivities, a substantial fraction of oceanic carbon uptake induced by natural or purposeful ocean fertilization originates, on timescales longer than decades, not from the atmosphere

Measuring ocean acidification: new technology for a new era of ocean chemistry.

PubMed

Byrne, Robert H

2014-05-20

Human additions of carbon dioxide to the atmosphere are creating a cascade of chemical consequences that will eventually extend to the bottom of all the world's oceans. Among the best-documented seawater effects are a worldwide increase in open-ocean acidity and large-scale declines in calcium carbonate saturation states. The susceptibility of some young, fast-growing calcareous organisms to adverse impacts highlights the potential for biological and economic consequences. Many important aspects of seawater CO2 chemistry can be only indirectly observed at present, and important but difficult-to-observe changes can include shifts in the speciation and possibly bioavailability of some life-essential elements. Innovation and invention are urgently needed to develop the in situ instrumentation required to document this era of rapid ocean evolution.

Stimulated emission and spontaneous loss pump-probe microscopy for background removal

NASA Astrophysics Data System (ADS)

Das, Subir; Ho, Bo-Wei; Kao, Fu-Jen

2018-02-01

In this work, we have established a double modulation lock-in detection technique using two semiconductor laser diodes in stimulated emission based pump-probe microscopy. By modulating the pump and probe beams at two different frequencies, f1 and f2, the signal is then recovered with the sum frequency, (f1+ f2), so as to minimize the leak-through noise due to the spontaneous emission caused by the pump beam. In this way, the DC background that is often attributed to the stimulated emission is effectively removed. Our technique has implemented in ATTO647N fluorescent dye which is applicable for many biological applications.

Nutrient budgets in the subtropical ocean gyres dominated by lateral transport

NASA Astrophysics Data System (ADS)

Letscher, Robert T.; Primeau, François; Moore, J. Keith

2016-11-01

Ocean circulation replenishes surface nutrients depleted by biological production and export. Vertical processes are thought to dominate, but estimated vertical nutrient fluxes are insufficient to explain observed net productivity in the subtropical ocean gyres. Lateral inputs help balance the North Atlantic nutrient budget, but their importance for other gyres has not been demonstrated. Here we use an ocean model that couples circulation and ecosystem dynamics to show that lateral transport and biological uptake of inorganic and organic forms of nitrogen and phosphorus from the gyre margins exceeds the vertical delivery of nutrients, supplying 24-36% of the nitrogen and 44-67% of the phosphorus required to close gyre nutrient budgets. At the Bermuda and Hawaii time-series sites, nearly half of the annual lateral supply by lateral transport occurs during the summer-to-fall stratified period, helping explain seasonal patterns of inorganic carbon drawdown and nitrogen fixation. Our study confirms the importance of upper-ocean lateral nutrient transport for understanding the biological cycles of carbon and nutrients in the ocean's largest biome.

Seasonal cooling and blooming in tropical oceans

NASA Astrophysics Data System (ADS)

Longhurst, Alan

1993-11-01

The relative importance of tropical pelagic algal blooms in not yet fully appreciated and the way they are induced not well understood. The tropical Atlantic supports pelagic blooms together equivalent to the North Atlantic spring bloom. These blooms are driven by thermocline tilting, curl of wind stress and eddy upwelling as the ocean responds to intensified basin-scale winds in boreal summer. The dimensions of the Pacific Ocean are such that seasonal thermocline tilting does not occur, and nutrient conditions are such that tilting might not induce bloom, in any case. Divergence at the equator is a separate process that strengthens the Atlantic bloom, is more prominent in the eastern Pacific, and in the Indian Ocean induces a bloom only in the western part of the ocean. Where western jet currents are retroflected from the coast off Somalia and Brazil, eddy upwelling induces prominent blooms. In the eastward flow of the northern equatorial countercurrents, positive wind curl stress induces Ekman pumping and the induction of algal blooms aligned with the currents. Some apparent algal bloom, such as that seen frequently in CZCS images westwards from Senegal, must be due to interference from airborne dust.

Food supply confers calcifiers resistance to ocean acidification.

PubMed

Ramajo, Laura; Pérez-León, Elia; Hendriks, Iris E; Marbà, Núria; Krause-Jensen, Dorte; Sejr, Mikael K; Blicher, Martin E; Lagos, Nelson A; Olsen, Ylva S; Duarte, Carlos M

2016-01-18

Invasion of ocean surface waters by anthropogenic CO2 emitted to the atmosphere is expected to reduce surface seawater pH to 7.8 by the end of this century compromising marine calcifiers. A broad range of biological and mineralogical mechanisms allow marine calcifiers to cope with ocean acidification, however these mechanisms are energetically demanding which affect other biological processes (trade-offs) with important implications for the resilience of the organisms against stressful conditions. Hence, food availability may play a critical role in determining the resistance of calcifiers to OA. Here we show, based on a meta-analysis of existing experimental results assessing the role of food supply in the response of organisms to OA, that food supply consistently confers calcifiers resistance to ocean acidification.

Food supply confers calcifiers resistance to ocean acidification

NASA Astrophysics Data System (ADS)

Ramajo, Laura; Pérez-León, Elia; Hendriks, Iris E.; Marbà, Núria; Krause-Jensen, Dorte; Sejr, Mikael K.; Blicher, Martin E.; Lagos, Nelson A.; Olsen, Ylva S.; Duarte, Carlos M.

2016-01-01

Invasion of ocean surface waters by anthropogenic CO2 emitted to the atmosphere is expected to reduce surface seawater pH to 7.8 by the end of this century compromising marine calcifiers. A broad range of biological and mineralogical mechanisms allow marine calcifiers to cope with ocean acidification, however these mechanisms are energetically demanding which affect other biological processes (trade-offs) with important implications for the resilience of the organisms against stressful conditions. Hence, food availability may play a critical role in determining the resistance of calcifiers to OA. Here we show, based on a meta-analysis of existing experimental results assessing the role of food supply in the response of organisms to OA, that food supply consistently confers calcifiers resistance to ocean acidification.

Food supply confers calcifiers resistance to ocean acidification

PubMed Central

Ramajo, Laura; Pérez-León, Elia; Hendriks, Iris E.; Marbà, Núria; Krause-Jensen, Dorte; Sejr, Mikael K.; Blicher, Martin E.; Lagos, Nelson A.; Olsen, Ylva S.; Duarte, Carlos M.

2016-01-01

Invasion of ocean surface waters by anthropogenic CO2 emitted to the atmosphere is expected to reduce surface seawater pH to 7.8 by the end of this century compromising marine calcifiers. A broad range of biological and mineralogical mechanisms allow marine calcifiers to cope with ocean acidification, however these mechanisms are energetically demanding which affect other biological processes (trade-offs) with important implications for the resilience of the organisms against stressful conditions. Hence, food availability may play a critical role in determining the resistance of calcifiers to OA. Here we show, based on a meta-analysis of existing experimental results assessing the role of food supply in the response of organisms to OA, that food supply consistently confers calcifiers resistance to ocean acidification. PMID:26778520

Variable reactivity of particulate organic matter in a global ocean biogeochemical model

NASA Astrophysics Data System (ADS)

Aumont, Olivier; van Hulten, Marco; Roy-Barman, Matthieu; Dutay, Jean-Claude; Éthé, Christian; Gehlen, Marion

2017-05-01

The marine biological carbon pump is dominated by the vertical transfer of particulate organic carbon (POC) from the surface ocean to its interior. The efficiency of this transfer plays an important role in controlling the amount of atmospheric carbon that is sequestered in the ocean. Furthermore, the abundance and composition of POC is critical for the removal of numerous trace elements by scavenging, a number of which, such as iron, are essential for the growth of marine organisms, including phytoplankton. Observations and laboratory experiments have shown that POC is composed of numerous organic compounds that can have very different reactivities. However, this variable reactivity of POC has never been extensively considered, especially in modelling studies. Here, we introduced in the global ocean biogeochemical model NEMO-PISCES a description of the variable composition of POC based on the theoretical reactivity continuum model proposed by Boudreau and Ruddick (1991). Our model experiments show that accounting for a variable lability of POC increases POC concentrations in the ocean's interior by 1 to 2 orders of magnitude. This increase is mainly the consequence of a better preservation of small particles that sink slowly from the surface. Comparison with observations is significantly improved both in abundance and in size distribution. Furthermore, the amount of carbon that reaches the sediments is increased by more than a factor of 2, which is in better agreement with global estimates of the sediment oxygen demand. The impact on the major macronutrients (nitrate and phosphate) remains modest. However, iron (Fe) distribution is strongly altered, especially in the upper mesopelagic zone as a result of more intense scavenging: vertical gradients in Fe are milder in the upper ocean, which appears to be closer to observations. Thus, our study shows that the variable lability of POC can play a critical role in the marine

Active cycling of organic carbon in the central Arctic Ocean

NASA Astrophysics Data System (ADS)

Wheeler, Patricia A.; Gosselin, Michel; Sherr, Evelyn; Thibaultc, Delphine; Kirchman, David L.; Benner, Ronald; Whitledge, Terry E.

1996-04-01

THE notion of a barren central Arctic Ocean has been accepted since English's pioneering work1 on drifting ice-islands. The year-round presence of ice, a short photosynthetic season and low temperatures were thought to severely limit biological production1,2, although the paucity of data was often noted. Because primary production appeared to be low1,2, subsequent studies assumed that most organic carbon was either derived from river inputs or imported from adjacent continental-shelf regions3,4. Here we present shipboard measurements of biological produc-tion, biomass and organic carbon standing-stocks made during a cruise through the ice covering the central Arctic Ocean. Our results indicate that the central Arctic region is not a biological desert. Although it is less productive than oligotrophic ocean regions not covered by ice, it supports an active biological community which contributes to the cycling of organic carbon through dissolved and particulate pools.

Continuously pumping and reactivating gas pump

DOEpatents

Batzer, T.H.; Call, W.R.

Apparatus for continuous pumping using cycling cryopumping panels. A plurality of liquid helium cooled panels are surrounded by movable nitrogen cooled panels that alternatively expose or shield the helium cooled panels from the space being pumped. Gases condense on exposed helium cooled panels until the nitrogen cooled panels are positioned to isolate the helium cooled panels. The helium cooled panels are incrementally warmed, causing captured gases to accumulate at the base of the panels, where an independant pump removes the gases. After the helium cooled panels are substantially cleaned of condensate, the nitrogen cooled panels are positioned to expose the helium cooled panels to the space being pumped.

Continuously pumping and reactivating gas pump

DOEpatents

Batzer, Thomas H.; Call, Wayne R.

1984-01-01

Apparatus for continuous pumping using cycling cyropumping panels. A plurality of liquid helium cooled panels are surrounded by movable nitrogen cooled panels the alternatively expose or shield the helium cooled panels from the space being pumped. Gases condense on exposed helium cooled panels until the nitrogen cooled panels are positioned to isolate the helium cooled panels. The helium cooled panels are incrementally warmed, causing captured gases to accumulate at the base of the panels, where an independent pump removes the gases. After the helium cooled panels are substantially cleaned of condensate, the nitrogen cooled panels are positioned to expose the helium cooled panels to the space being pumped.

Global and regional ocean carbon uptake and climate change: sensitivity to a substantial mitigation scenario

NASA Astrophysics Data System (ADS)

Vichi, Marcello; Manzini, Elisa; Fogli, Pier Giuseppe; Alessandri, Andrea; Patara, Lavinia; Scoccimarro, Enrico; Masina, Simona; Navarra, Antonio

2011-11-01

Under future scenarios of business-as-usual emissions, the ocean storage of anthropogenic carbon is anticipated to decrease because of ocean chemistry constraints and positive feedbacks in the carbon-climate dynamics, whereas it is still unknown how the oceanic carbon cycle will respond to more substantial mitigation scenarios. To evaluate the natural system response to prescribed atmospheric "target" concentrations and assess the response of the ocean carbon pool to these values, 2 centennial projection simulations have been performed with an Earth System Model that includes a fully coupled carbon cycle, forced in one case with a mitigation scenario and the other with the SRES A1B scenario. End of century ocean uptake with the mitigation scenario is projected to return to the same magnitude of carbon fluxes as simulated in 1960 in the Pacific Ocean and to lower values in the Atlantic. With A1B, the major ocean basins are instead projected to decrease the capacity for carbon uptake globally as found with simpler carbon cycle models, while at the regional level the response is contrasting. The model indicates that the equatorial Pacific may increase the carbon uptake rates in both scenarios, owing to enhancement of the biological carbon pump evidenced by an increase in Net Community Production (NCP) following changes in the subsurface equatorial circulation and enhanced iron availability from extratropical regions. NCP is a proxy of the bulk organic carbon made available to the higher trophic levels and potentially exportable from the surface layers. The model results indicate that, besides the localized increase in the equatorial Pacific, the NCP of lower trophic levels in the northern Pacific and Atlantic oceans is projected to be halved with respect to the current climate under a substantial mitigation scenario at the end of the twenty-first century. It is thus suggested that changes due to cumulative carbon emissions up to present and the projected concentration

Promoting Implementation of Multi-Disciplinary Sustained Ocean Observations

NASA Astrophysics Data System (ADS)

Pearlman, Jay; Bourassa, Mark; Hill, Katherine; Miloslavich, Patricia; Simmons, Samantha; Sloyan, Bernadette; Telszewski, Maciej

2017-04-01

Since the OceanObs'09 Conference, the ocean observing community has been improving coordination and collaboration amongst physical, biogeochemical and biology/ecosystem communities. Societal and scientific requirements for sustained observations are being captured in Essential Ocean Variables (EOVs), many of which are also Essential Climate Variables (ECVs) as defined by the Global Climate Observing System reporting to the UNFCCC. Significant progress has been made through the introduction of the Framework for Ocean Observing in 2012 and the creation and refinement of the disciplinary EOVs, based on expert evaluation of feasibility and impact. With advances in observing technology, and the definition of EOVs, clear opportunities exist to improve the coordinated planning and implementation of observing activities measuring EOVs across the three disciplines of physical, biogeochemical and biology/ecosystem oceanography. In early 2017, a workshop examined priority steps forward with the objectives: • To build on the established societal and scientific requirements expressed in EOVs, identify the key applications and phenomena that will benefit from co-located multi-disciplinary sustained observations • To identify near-term innovation priorities for observing platforms and sensors to enable multi-disciplinary observations, and • To identify programmatic and professional connections between existing and emerging observing networks that will increase multi-disciplinary observations. To support these objectives and to provide a mechanism for looking at convergence across the oceans disciplines, three preselected demonstration themes were defined and discussed: • Changes in plankton communities (including ocean color), • Oxygen minimum zones, • Open ocean/shelf interactions (including boundary currents) These themes were chosen because they represent global and challenging problems that are best addressed through collaboration of physical, biogeochemical and

Estimates of Gelatinous Zooplankton Carbon Flux in the Global Oceans

NASA Astrophysics Data System (ADS)

Luo, J. Y.; Condon, R.; Cowen, R. K.

2016-02-01

Gelatinous zooplankton (GZ), which include the cnidarians, ctenophores, and pelagic tunicates, are a common feature of marine ecosystems worldwide, but their contribution to global biogeochemical fluxes has never been assessed. We constructed a carbon-cycle model with a single, annual time-step and resolved to a 5° spatial grid for the three major GZ groups in order to evaluate the GZ-mediated carbon fluxes and export to depth. Biomass inputs (totaling 0.149 Pg C) were based off of Lucas et al. (2014) and updated using the JeDI database (Condon et al. 2015). From the upper ocean, biomass export flux from cnidarians, ctenophores, and tunicates totaled 2.96 ± 2.82 Pg C y-1, though only 0.199 ± 0.023 Pg C y-1 of GZ carbon were transferred to upper trophic levels, roughly amounting to one-quarter of all mesozooplankton production flux. In contrast, GZ fluxes to DOC only comprised ca. 2% of labile DOC flux. Egestion flux from the upper ocean totaled 2.56 ± 3.35 Pg C y-1, with over 80% being fast-sinking tunicate fecal pellets. Due to fast sinking rates of carcasses and fecal pellets, 26% of all C export from the upper ocean reached the seafloor, such that GZ fecal matter is estimated to comprise between 20-30% of global POC surface export and 11-30% of POC seafloor deposition. Finally, results from sensitivity analyses showed no increase in cnidarian and ctenophore export fluxes with increased temperature and jelly biomass, though tunicate export fluxes showed some increase with both temperature and biomass. These results suggest that current estimates of global POC flux from the surface oceans, which range between 8.6 - 12.9 Pg C y-1, may be underestimated by as much as 20 - 25%, implying a definite need to incorporate GZ mediated flux in estimating the biological pump transfer efficiency. Our study represents the first effort to quantify the role of gelatinous zooplankton in the global marine carbon cycle.

Ocean surface partitioning strategies using ocean colour remote Sensing: A review

NASA Astrophysics Data System (ADS)

Krug, Lilian Anne; Platt, Trevor; Sathyendranath, Shubha; Barbosa, Ana B.

2017-06-01

The ocean surface is organized into regions with distinct properties reflecting the complexity of interactions between environmental forcing and biological responses. The delineation of these functional units, each with unique, homogeneous properties and underlying ecosystem structure and dynamics, can be defined as ocean surface partitioning. The main purposes and applications of ocean partitioning include the evaluation of particular marine environments; generation of more accurate satellite ocean colour products; assimilation of data into biogeochemical and climate models; and establishment of ecosystem-based management practices. This paper reviews the diverse approaches implemented for ocean surface partition into functional units, using ocean colour remote sensing (OCRS) data, including their purposes, criteria, methods and scales. OCRS offers a synoptic, high spatial-temporal resolution, multi-decadal coverage of bio-optical properties, relevant to the applications and value of ocean surface partitioning. In combination with other biotic and/or abiotic data, OCRS-derived data (e.g., chlorophyll-a, optical properties) provide a broad and varied source of information that can be analysed using different delineation methods derived from subjective, expert-based to unsupervised learning approaches (e.g., cluster, fuzzy and empirical orthogonal function analyses). Partition schemes are applied at global to mesoscale spatial coverage, with static (time-invariant) or dynamic (time-varying) representations. A case study, the highly heterogeneous area off SW Iberian Peninsula (NE Atlantic), illustrates how the selection of spatial coverage and temporal representation affects the discrimination of distinct environmental drivers of phytoplankton variability. Advances in operational oceanography and in the subject area of satellite ocean colour, including development of new sensors, algorithms and products, are among the potential benefits from extended use, scope and

Ocean acidification may increase calcification rates, but at a cost

PubMed Central

Wood, Hannah L; Spicer, John I; Widdicombe, Stephen

2008-01-01

Ocean acidification is the lowering of pH in the oceans as a result of increasing uptake of atmospheric carbon dioxide. Carbon dioxide is entering the oceans at a greater rate than ever before, reducing the ocean's natural buffering capacity and lowering pH. Previous work on the biological consequences of ocean acidification has suggested that calcification and metabolic processes are compromised in acidified seawater. By contrast, here we show, using the ophiuroid brittlestar Amphiura filiformis as a model calcifying organism, that some organisms can increase the rates of many of their biological processes (in this case, metabolism and the ability to calcify to compensate for increased seawater acidity). However, this upregulation of metabolism and calcification, potentially ameliorating some of the effects of increased acidity comes at a substantial cost (muscle wastage) and is therefore unlikely to be sustainable in the long term. PMID:18460426

Thermal Performance of Capillary Pumped Loops Onboard Terra Spacecraft

NASA Technical Reports Server (NTRS)

Ku, Jentung; Ottenstein, Laura; Butler, Charles D.; Swanson, Theodore; Thies, Diane

2004-01-01

The Terra spacecraft is the flagship of NASA's Earth Science Enterprise. It provides global data on the state of atmosphere, land and oceans, as well as their interactions with solar radiation and one another. Three Terra instruments utilize Capillary Pumped Heat Transport System (CPHTS) for temperature control: Each CPHTS, consisting of two capillary pumped loops (CPLs) and several heat pipes and electrical heaters, is designed for instrument heat loads ranging from 25W to 264W. The working fluid is ammonia. Since the launch of the Terra spacecraft, each CPHTS has been providing a stable interface temperature specified by the instrument under all modes of spacecraft and instrument operations. The ability to change the CPHTS operating temperature upon demand while in service has also extended the useful life of one instrument. This paper describes the design and on-orbit performance of the CPHTS thermal systems.

Paleoproductivity in the northwestern Pacific Ocean during the Pliocene-Pleistocene climate transition (3.0-1.8 Ma)

NASA Astrophysics Data System (ADS)

Venti, Nicholas L.; Billups, Katharina; Herbert, Timothy D.

2017-02-01

Alkenone mass accumulation rates (MARs) provide a proxy for export productivity in the northwestern Pacific (Ocean Drilling Program Site 1208) spanning the late Pliocene through early Pleistocene (3.0-1.8 Ma). We investigate changes in productivity associated with global cooling during the onset and expansion of Northern Hemisphere glaciation (NHG). Alkenone MARs vary on obliquity timescales throughout, but the amplitude increases at 2.75 Ma concurrent with the intensification of NHG and cooling of the sea surface by 3°C. The obliquity-scale variations in alkenone MARs parallel shipboard measurements of sediment color reflectance (%) with higher MARs significantly correlated (>95%) with darker (opal-rich) intervals. Variations in both lead benthic foraminiferal δ18O values by 1.5-2 kyr suggesting that export productivity may be a contributing factor, rather than a response, to the extent of continental glaciation. The biological pump is therefore a plausible mechanism for transferring atmospheric CO2 into the deep ocean during the onset of NHG and the ensuing obliquity-dominated climate regime. Obliquity-scale correlation between productivity and magnetic susceptibility is consistent with a link via westerly winds delivering terrigenous sediments and mixing the upper water column. Alkenone MARs also contain a 400 kyr modulation. Because this periodicity is a multiple of the residence time of carbon in the ocean, it may reflect inputs of new nutrients associated with eccentricity-forced changes in the terrestrial biosphere and weathering. We ascribe these findings to interactions between the East Asian winter monsoon and productivity in the North Pacific Ocean, perhaps contributing to Plio-Pleistocene climate change.

Radon and radium in the ice-covered Arctic Ocean, and what they reveal about gas exchange in the sea ice zone.

NASA Astrophysics Data System (ADS)

Loose, B.; Kelly, R. P.; Bigdeli, A.; Moran, S. B.

2014-12-01

The polar sea ice zones are regions of high primary productivity and interior water mass formation. Consequently, the seasonal sea ice cycle appears important to both the solubility and biological carbon pumps. To estimate net CO2 transfer in the sea ice zone, we require accurate estimates of the air-sea gas transfer velocity. In the open ocean, the gas transfer velocity is driven by wind, waves and bubbles - all of which are strongly altered by the presence of sea ice, making it difficult to translate open ocean estimates of gas transfer to the ice zone. In this study, we present profiles of 222Rn and 226Ra throughout the mixed-layer and euphotic zone. Profiles were collected spanning a range of sea ice cover conditions from 40 to 100%. The profiles of Rn/Ra can be used to estimate the gas transfer velocity, but the 3.8 day half-life of 222Rn implies that mixed layer radon will have a memory of the past ~20 days of gas exchange forcing, which may include a range of sea ice cover conditions. Here, we compare individual estimates of the gas transfer velocity to the turbulent forcing conditions constrained from shipboard and regional reanalysis data to more appropriately capture the time history upper ocean Rn/Ra.

The biological assessment of flora and fauna as standards for changes in the near-shore ocean environment: a study of Barbers Point Harbor.

PubMed

Hokama, Y; Wachi, K M; Shiraki, A; Goo, C; Ebesu, J S

2001-02-01

The biological assessments of the flora and fauna in the near-shore ocean environment, specifically Barbers Point Harbor (BPH), demonstrate the usefulness of these biological analyses for evaluation of the changes occurring following man-made excavation for expansion of the harbor. The study included identification and enumeration of macroalgae and dinoflagellates and analyses of herbivores and carnivores in four areas within the perimeter of the harbor and the north and south entrances into the harbor. Numbers of macroalgae varied between 1994 and 1999 surveys, with significant decrease in numbers in stations C, D and E. Stations A and B were similar between 1994 and 1999 with a slight increase in 1999. The significant differences were shown with the appearance of Gambierdiscus toxicus (G toxicus) in 1999 among the algae in stations A and B. Assessment of herbivores and carnivores with the immunological membrane immunobead assay using monoclonal antibody to ciguatoxin and related polyethers demonstrated an increase in fish toxicity among the herbivore from 1994-1999 (22% increase) with a decrease (22%) in non-toxic fish. This was also demonstrated in the carnivores, but to a lesser degree. It is suggested that the biological analyses of the flora and the fauna of the near-shore ocean environment are appropriate to assess the changes that occur from natural and man-made alterations.

Near shot-noise limited time-resolved circular dichroism pump-probe spectrometer

NASA Astrophysics Data System (ADS)

Stadnytskyi, Valentyn; Orf, Gregory S.; Blankenship, Robert E.; Savikhin, Sergei

2018-03-01

We describe an optical near shot-noise limited time-resolved circular dichroism (TRCD) pump-probe spectrometer capable of reliably measuring circular dichroism signals in the order of μdeg with nanosecond time resolution. Such sensitivity is achieved through a modification of existing TRCD designs and introduction of a new data processing protocol that eliminates approximations that have caused substantial nonlinearities in past measurements and allows the measurement of absorption and circular dichroism transients simultaneously with a single pump pulse. The exceptional signal-to-noise ratio of the described setup makes the TRCD technique applicable to a large range of non-biological and biological systems. The spectrometer was used to record, for the first time, weak TRCD kinetics associated with the triplet state energy transfer in the photosynthetic Fenna-Matthews-Olson antenna pigment-protein complex.

[The development tendencies of infusion pumps/syringe pumps].

PubMed

Zhang, Peng; Wang, Shu-Yi; Yu, Chuan-Yi; Zhang, Min-Yan

2009-07-01

Through the investigation about the current infusion pumps, the development tendencies of the next generation infusion pumps/Syringe Pumps with regarding to human-factors, practicality and application under MRI (Magnetic resonance imaging) were put forward.

Effects of Ocean Ecosystem on Marine Aerosol-Cloud Interaction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meskhidze, Nicholas; Nenes, Athanasios

Using smore » atellite data for the surface ocean, aerosol optical depth (AOD), and cloud microphysical parameters, we show that statistically significant positive correlations exist between ocean ecosystem productivity, the abundance of submicron aerosols, and cloud microphysical properties over different parts of the remote oceans. The correlation coefficient for remotely sensed surface chlorophyll a concentration ([Chl- a ]) and liquid cloud effective radii over productive areas of the oceans varies between − 0.2 and − 0.6 . Special attention is given to identifying (and addressing) problems from correlation analysis used in the previous studies that can lead to erroneous conclusions. A new approach (using the difference between retrieved AOD and predicted sea salt aerosol optical depth, AOD diff ) is developed to explore causal links between ocean physical and biological systems and the abundance of cloud condensation nuclei (CCN) in the remote marine atmosphere. We have found that over multiple time periods, 550 nm AOD diff (sensitive to accumulation mode aerosol, which is the prime contributor to CCN) correlates well with [Chl- a ] over the productive waters of the Southern Ocean. Since [Chl- a ] can be used as a proxy of ocean biological productivity, our analysis demonstrates the role of ocean ecology in contributing CCN, thus shaping the microphysical properties of low-level marine clouds.« less

Effects of Ocean Ecosystem on Marine Aerosol-Cloud Interaction

DOE PAGES

Meskhidze, Nicholas; Nenes, Athanasios

2010-01-01

Using smore » atellite data for the surface ocean, aerosol optical depth (AOD), and cloud microphysical parameters, we show that statistically significant positive correlations exist between ocean ecosystem productivity, the abundance of submicron aerosols, and cloud microphysical properties over different parts of the remote oceans. The correlation coefficient for remotely sensed surface chlorophyll a concentration ([Chl- a ]) and liquid cloud effective radii over productive areas of the oceans varies between − 0.2 and − 0.6 . Special attention is given to identifying (and addressing) problems from correlation analysis used in the previous studies that can lead to erroneous conclusions. A new approach (using the difference between retrieved AOD and predicted sea salt aerosol optical depth, AOD diff ) is developed to explore causal links between ocean physical and biological systems and the abundance of cloud condensation nuclei (CCN) in the remote marine atmosphere. We have found that over multiple time periods, 550 nm AOD diff (sensitive to accumulation mode aerosol, which is the prime contributor to CCN) correlates well with [Chl- a ] over the productive waters of the Southern Ocean. Since [Chl- a ] can be used as a proxy of ocean biological productivity, our analysis demonstrates the role of ocean ecology in contributing CCN, thus shaping the microphysical properties of low-level marine clouds.« less

Designing the modern pump: engineering aspects of continuous subcutaneous insulin infusion software.

PubMed

Welsh, John B; Vargas, Steven; Williams, Gary; Moberg, Sheldon

2010-06-01

Insulin delivery systems attracted the efforts of biological, mechanical, electrical, and software engineers well before they were commercially viable. The introduction of the first commercial insulin pump in 1983 represents an enduring milestone in the history of diabetes management. Since then, pumps have become much more than motorized syringes and have assumed a central role in diabetes management by housing data on insulin delivery and glucose readings, assisting in bolus estimation, and interfacing smoothly with humans and compatible devices. Ensuring the integrity of the embedded software that controls these devices is critical to patient safety and regulatory compliance. As pumps and related devices evolve, software engineers will face challenges and opportunities in designing pumps that are safe, reliable, and feature-rich. The pumps and related systems must also satisfy end users, healthcare providers, and regulatory authorities. In particular, pumps that are combined with glucose sensors and appropriate algorithms will provide the basis for increasingly safe and precise automated insulin delivery-essential steps to developing a fully closed-loop system.

Pump tank divider plate for sump suction sodium pumps

DOEpatents

George, John A.; Nixon, Donald R.

1977-01-01

A circular plate extends across the diameter of "sump suction" pump, with a close clearance between the edge of the plate and the wall of the pump tank. The plate is located above the pump impeller, inlet and outlet flow nozzles but below the sodium free surface and effectively divides the pump tank into two separate chambers. On change of pump speed, the close fitting flow restriction plate limits the rate of flow into or out of the upper chamber, thereby minimizing the rate of level change in the tank and permitting time for the pump cover gas pressure to be varied to maintain an essentially constant level.

Biogeochemical Transformations in the History of the Ocean.

PubMed

Lenton, Timothy M; Daines, Stuart J

2017-01-03

The ocean has undergone several profound biogeochemical transformations in its 4-billion-year history, and these were an integral part of the coevolution of life and the planet. This review focuses on changes in ocean redox state as controlled by changes in biological activity, nutrient concentrations, and atmospheric O 2 . Motivated by disparate interpretations of available geochemical data, we aim to show how quantitative modeling-spanning microbial mats, shelf seas, and the open ocean-can help constrain past ocean biogeochemical redox states and show what caused transformations between them. We outline key controls on ocean redox structure and review pertinent proxies and their interpretation. We then apply this quantitative framework to three key questions: How did the origin of oxygenic photosynthesis transform ocean biogeochemistry? How did the Great Oxidation transform ocean biogeochemistry? And how was ocean biogeochemistry transformed in the Neoproterozoic-Paleozoic?

Alternative backing up pump for turbomolecular pumps

DOEpatents

Myneni, Ganapati Rao

2003-04-22

As an alternative to the use of a mechanical backing pump in the application of wide range turbomolecular pumps in ultra-high and extra high vacuum applications, palladium oxide is used to convert hydrogen present in the evacuation stream and related volumes to water with the water then being cryo-pumped to a low pressure of below about 1.e.sup.-3 Torr at 150.degree. K. Cryo-pumping is achieved using a low cost Kleemenco cycle cryocooler, a somewhat more expensive thermoelectric cooler, a Venturi cooler or a similar device to achieve the required minimization of hydrogen partial pressure.

A Catalyst for Ocean Acidification Research and Collaboration

NASA Astrophysics Data System (ADS)

Benway, Heather M.; Cooley, Sarah R.; Doney, Scott C.

2010-03-01

Ocean Carbon and Biogeochemistry Short Course on Ocean Acidification; Woods Hole, Massachusetts, 2-13 November 2009; The Ocean Carbon and Biogeochemistry (OCB) program is a coordinating body for the U.S. research community that focuses on the ocean's role in the global Earth system, bringing together research in geochemistry, ocean physics, and ecology. With support from its federal sponsors (U.S. National Science Foundation, NASA, and National Oceanic and Atmospheric Administration (NOAA)) and the European Project on Ocean Acidification (EPOCA), the OCB Project Office coordinated and hosted a hands-on ocean acidification short course at the Marine Biological Laboratory (MBL) and the Woods Hole Oceanographic Institution (WHOI). The OCB Ocean Acidification Subcommittee (http://www.us-ocb.org/about.html), chaired by Joan Kleypas (National Center for Atmospheric Research) and Richard Feely (Pacific Marine Environmental Laboratory, NOAA), provided critical guidance on the course scope, curriculum, and instructors.

Low temperature hydrothermal oil and associated biological precursors in serpentinites from Mid-Ocean Ridge

NASA Astrophysics Data System (ADS)

Pasini, Valerio; Brunelli, Daniele; Dumas, Paul; Sandt, Christophe; Frederick, Joni; Benzerara, Karim; Bernard, Sylvain; Ménez, Bénédicte

2013-09-01

The origin of light hydrocarbons discovered at serpentinite-hosted mid-ocean hydrothermal fields is generally attributed to the abiogenic reduction of carbon (di)oxide by molecular hydrogen released during the progressive hydration of mantle-derived peridotites. These serpentinization by-products represent a valuable source of carbon and energy and are known to support deep microbial ecosystems unrelated to photosynthesis. In addition, the pool of subsurface organic compounds could also include materials derived from the thermal degradation of biological material. We re-investigate the recently described relics of deep microbial ecosystems hosted in serpentinites of the Mid-Atlantic Ridge (4-6°N) in order to study the ageing and (hydro)thermal degradation of the preserved biomass. An integrated set of high resolution micro-imaging techniques (Scanning Electron Microscopy, High Resolution Transmission Electron Microscopy, Raman and Fourier Transform Infra-Red microspectroscopy, Confocal Laser Scanning Microscopy, and Scanning Transmission X-ray Microscopy at the carbon K-edge) has been applied to map the distribution of the different organic components at the micrometer scale and to characterize their speciation and structure. We show that biologically-derived material, containing aliphatic groups, along with carbonyl and amide functional groups, has experienced hydrothermal degradation and slight aromatization. In addition, aliphatic compounds up to C6-C10 with associated carboxylic functional groups wet the host bastite and the late serpentine veins crosscutting the rock. These compounds represent a light soluble organic fraction expelled after biomass degradation through oxidation and thermal cracking. The detected complex organic matter distribution recalls a typical petroleum system, where fossil organic matter of biological origin maturates, expelling the soluble fraction which then migrates from the source to the reservoir. Ecosystem-hosting serpentinites

Liquid metal pump

DOEpatents

Pennell, William E.

1982-01-01

The liquid metal pump comprises floating seal rings and attachment of the pump diffuser to the pump bowl for isolating structural deflections from the pump shaft bearings. The seal rings also eliminate precision machining on large assemblies by eliminating the need for a close tolerance fit between the mounting surfaces of the pump and the seals. The liquid metal pump also comprises a shaft support structure that is isolated from the pump housing for better preservation of alignment of shaft bearings. The shaft support structure also allows for complete removal of pump internals for inspection and repair.

Regional and inter-annual variability in Atlantic zooplankton en route to the Arctic Ocean: potential effects of multi-path Atlantic water advection through Fram Strait and the Barents Sea

NASA Astrophysics Data System (ADS)

Kwasniewski, Slawomir; Gluchowska, Marta; Trudnowska, Emilia; Ormanczyk, Mateusz; Walczowski, Waldemar; Beszczynska-Moeller, Agnieszka

2016-04-01

The Arctic is among the regions where the climate change effects on ecosystem will be the most rapid and consequential, with Arctic amplification recognized as an integral part of the process. Great part of the changes are forced by advection of warm waters from the North Atlantic and the expected modifications of Arctic marine ecosystem will be induced not only by changing environmental conditions but also as a result of introducing Atlantic biota. Thus, the knowledge of physical and biological heterogeneity of Atlantic inflow is requisite for understanding the effects of climate change on biological diversity and ecosystem functioning in the Arctic. The complex and variable two-branched structure of the Atlantic Water flow via Fram Strait and the Barents Sea most likely has a strong influence on the ocean biology in these regions, especially in the pelagic realm. Zooplankton are key components of marine ecosystems which form essential links between primary producers and grazer/predator consumers, thus they are important for functioning of the biological carbon pump. Changes in zooplankton distribution and abundance may have cascading effects on ecosystem functioning, with regulatory effects on climate. Based on data collected in summers of 2012-2014, within the scope of the Polish-Norwegian PAVE research project, we investigate zooplankton distribution, abundance and selected structural characteristics of communities, in relation to water mass properties in the Atlantic Water complex flow to the Arctic Ocean. The main questions addressed here are: what are the differences in zooplankton patterns between the Fram Strait and Barents Sea branches, and how does the inter-annual variability of Atlantic Water advection relate to changes in zooplankton? The results of the investigation are precondition for foreseeing changes in the pelagic realm in the Arctic Ocean and are necessary for constructing and tuning plankton components of ecosystem models.

Modeling the bloom evolution and carbon flows during SOIREE: Implications for future in situ iron-enrichments in the Southern Ocean

NASA Astrophysics Data System (ADS)

Hannon, E.; Boyd, P. W.; Silvoso, M.; Lancelot, C.

The impact of a mesoscale in situ iron-enrichment experiment (SOIREE) on the planktonic ecosystem and biological pump in the Australasian-Pacific sector of the Southern Ocean was investigated through model simulations over a period of 60-d following an initial iron infusion. For this purpose we used a revised version of the biogeochemical SWAMCO model ( Lancelot et al., 2000), which describes the cycling of C, N, P, Si, Fe through aggregated chemical and biological components of the planktonic ecosystem in the high nitrate low chlorophyll (HNLC) waters of the Southern Ocean. Model runs were conducted for both the iron-fertilized waters and the surrounding HNLC waters, using in situ meteorological forcing. Validation was performed by comparing model predictions with observations recorded during the 13-d site occupation of SOIREE. Considerable agreement was found for the magnitude and temporal trends in most chemical and biological variables (the microbial food web excepted). Comparison of simulations run for 13- and 60-d showed that the effects of iron fertilization on the biota were incomplete over the 13-d monitoring of the SOIREE bloom. The model results indicate that after the vessel departed the SOIREE site there were further iron-mediated increases in properties such as phytoplankton biomass, production, export production, and uptake of atmospheric CO 2, which peaked 20-30 days after the initial iron infusion. Based on model simulations, the increase in net carbon production at the scale of the fertilized patch (assuming an area of 150 km2) was estimated to 9725 t C by day 60. Much of this production accumulated in the upper ocean, so that the predicted downward export of particulate organic carbon (POC) only represented 22% of the accumulated C in the upper ocean. Further model runs that implemented improved parameterization of diatom sedimentation (i.e. including iron-mediated diatom sinking rate, diatom chain-forming and aggregation) suggested that the

First identification of boronic species as novel potential inhibitors of the Staphylococcus aureus NorA efflux pump.

PubMed

Fontaine, Fanny; Hequet, Arnaud; Voisin-Chiret, Anne-Sophie; Bouillon, Alexandre; Lesnard, Aurélien; Cresteil, Thierry; Jolivalt, Claude; Rault, Sylvain

2014-03-27

Overexpression of efflux pumps is an important mechanism of bacterial resistance that results in the extrusion of antimicrobial agents outside the bacterial cell. Inhibition of such pumps appears to be a promising strategy that could restore the potency of existing antibiotics. The NorA efflux pump of Staphylococcus aureus confers resistance to a wide range of unrelated substrates, such as hydrophilic fluoroquinolones, leading to a multidrug-resistance phenotype. In this work, approximately 150 heterocyclic boronic species were evaluated for their activity against susceptible and resistant strains of S. aureus. Twenty-four hit compounds, although inactive when tested alone, were found to potentiate ciprofloxacin activity by a 4-fold increase at concentrations ranging from 0.5 to 8 μg/mL against S. aureus 1199B, which overexpresses NorA. Boron-free analogues showed no biological activity, thus revealing that the boron atom is crucial for biological activity. This work describes the first reported efflux pump inhibitory activity of boronic acid derivatives.

Method And System For Examining Biological Materials Using Low Power Cw Excitation Raman Spectroscopy.

DOEpatents

Alfano, Robert R.; Wang, Wubao

2000-11-21

A method and system for examining biological materials using low-power cw excitation Raman spectroscopy. In accordance with the teachings of the invention, a low-power continuous wave (cw) pump laser beam and a low-power cw Stokes (or anti-Stokes) probe laser beam simultaneously illuminate a biological material and traverse the biological material in collinearity. The pump beam, whose frequency is varied, is used to induce Raman emission from the biological material. The intensity of the probe beam, whose frequency is kept constant, is monitored as it leaves the biological material. When the difference between the pump and probe excitation frequencies is equal to a Raman vibrational mode frequency of the biological material, the weak probe signal becomes amplified by one or more orders of magnitude (typically up to about 10.sup.4 -10.sup.6) due to the Raman emission from the pump beam. In this manner, by monitoring the intensity of the probe beam emitted from the biological material as the pump beam is varied in frequency, one can obtain an excitation Raman spectrum for the biological material tested. The present invention may be applied to in the in vivo and/or in vitro diagnosis of diabetes, heart disease, hepatitis, cancers and other diseases by measuring the characteristic excitation Raman lines of blood glucose, cholesterol, serum glutamic oxalacetic transaminase (SGOT)/serum glutamic pyruvic tansaminase (SGPT), tissues and other corresponding Raman-active body constituents, respectively. For example, it may also be used to diagnose diseases associated with the concentration of Raman-active constituents in urine, lymph and saliva It may be used to identify cancer in the breast, cervix, uterus, ovaries and the like by measuring the fingerprint excitation Raman spectra of these tissues. It may also be used to reveal the growing of tumors or cancers by measuring the levels of nitric oxide in tissue.

Pteropods as indicators for Cumulative Ocean Acidification Exposure

NASA Astrophysics Data System (ADS)

Bednarsek, N.; Klinger, T.

2016-02-01

Pteropods are ubiquitously distributed pelagic marine zooplankton of importance in productive upwelling regimes, where they represent an important prey item for variety of economically, ecologically, and culturally important fish species. Because of their extreme sensitivity to ocean acidification conditions, pteropods can be used to establish cause and effect relationships between OA status and biological condition. Incorporating biological responses into a successful management framework requires laboratory studies that demonstrate sentinel organism responses to specific stressors, while also documenting population or community level effects in the field linked to that stressor. Here, we describe the state of the science and an approach that demonstrates the linkage necessary to use pteropods as a sentinel organism for resource management under conditions of ocean acidification. To demonstrate this utility, newly developed methods were used to determine and quantify pteropod responses in the natural environment. Responses such as shell dissolution, shell calcification, changes in vertical distribution, and survival success were assessed to establish pteropod condition under a variety of OA conditions. While no single species or set of species can adequately capture all aspects of ecosystem change, pteropods represent first quantifiable, specific indicators for ocean acidification's effects on marine systems. The approach can be used in water quality assessments and in living marine resource management as part of the rapid and cost-effective monitoring of biological responses to ocean acidification. The social challenges of changing ocean chemistry will continue to grow in coming decades, making the availability of such straightforward metrics of impact indispensable across scales of time and space of relevance to managers.

A versatile and reconfigurable setup for all-terahertz time-resolved pump-probe spectroscopy.

PubMed

Elezzabi, A Y; Maraghechi, P

2012-05-01

A versatile optical setup for all-terahertz (THz) time resolved pump-probe spectroscopy was designed and tested. By utilizing a dual THz pulse generator emitter module, independent and synchronized THz radiation pump and probe pulses were produced, thus eliminating the need for THz beam splitters and the limitations associated with their implementation. The current THz setup allows for precise control of the electric fields splitting ratio between the THz radiation pump and probe pulses, as well as in-phase, out-of-phase, and polarization dependent pump-probe spectroscopy. Since the present THz pump-probe setup does not require specialized THz radiation optical components, such as phase shifters, polarization rotators, or wide bandwidth beam splitters, it can be easily implemented with minimal alterations to a conventional THz time domain spectroscopy system. The present setup is valuable for studying the time dynamics of THz coherent phenomena in solid-state, chemical, and biological systems.

Modeling Ocean Ecosystems: The PARADIGM Program

DTIC Science & Technology

2006-03-01

of biological reality: the wonderful com- 2. Nitrogen-fixing bacteria and archaea our concept of a species (e.g., Venter et plexity of ocean...ecosystems will never be ( diazotrophs ), which convert atmo- al., 2004; Doney et al., 2004; DeLong and fully described with numerical models of spheric...applying ocean inventory of nitrogen nutrients. numerical models, we are confronted Specifying "Functional Groups" Some diazotrophs fix both CO 2 and with

OSCILLATORY PUMP

DOEpatents

Underwood, N.

1958-09-23

This patent relates to a pump suitable fur pumping highly corrosive gases wherein no lubricant is needed in the pumping chamber thus eliminating possible contamination sources. The chamber contains a gas inlet and outlet in each side, with a paddle like piston suspended by a sylphon seal between these pcrts. An external arrangement causes the paddle to oscillate rapidly between the ports, alternately compressing and exhausting the gas trapped on each side of the paddle. Since the paddle does nnt touch the chamber sides at any point, no lubricant is required. This pump is useful for pumping large quantities of uranium hexafluorine.

On the role of mesoscale eddies for the biological productivity and biogeochemistry in the eastern tropical Pacific Ocean off Peru

NASA Astrophysics Data System (ADS)

Stramma, L.; Bange, H. W.; Czeschel, R.; Lorenzo, A.; Frank, M.

2013-06-01

Mesoscale eddies seem to play an important role for both the hydrography and biogeochemistry of the eastern tropical Pacific Ocean (ETSP) off Peru. However, detailed surveys of these eddies are not available, which has so far hampered an in depth understanding of their implications for nutrient distribution and biological productivity. In this study three eddies along a section at 16°45' S have been surveyed intensively during R/V Meteor cruise M90 in November 2012. A coastal mode water eddy, an open ocean mode water eddy and an open ocean cyclonic eddy have been identified and sampled in order to determine both their hydrographic properties and their influence on the biogeochemical setting of the ETSP. In the thermocline the temperature of the coastal anticyclonic eddy was up to 2 °C warmer, 0.2 more saline and the swirl velocity was up to 35 cm s-1. The observed temperature and salinity anomalies, as well as swirl velocities of both types of eddies were about twice as large as had been described for the mean eddies in the ETSP and the observed heat and salt anomalies (AHA, ASA) show a much larger variability than the mean AHA and ASA. We found that the eddies contributed significantly to productivity by maintaining pronounced subsurface maxima of chlorophyll. Based on a comparison of the coastal (young) mode water eddy and the open ocean (old) mode water eddy we conclude that the aging of eddies when they detach from the coast and move westward to the open ocean considerably influences the eddies' properties: chlorophyll maxima are weaker and nutrients are subducted. The coastal mode water eddy was found to be a hotspot of nitrogen loss in the OMZ, whereas, the open ocean cyclonic eddy was of negligible importance for nitrogen loss. Our results show that the important role the eddies play in the ETSP can only be fully deciphered and understood through dedicated high spatial and temporal resolution oceanographic/biogeochemical surveys.

Rotating and positive-displacement pumps for low-thrust rocket engines. Volume 1: Pump Evaluation and design. [of centrifugal pumps

NASA Technical Reports Server (NTRS)

Macgregor, C.; Csomor, A.

1974-01-01

Rotating and positive displacement pumps of various types were studied for pumping liquid fluorine for low-thrust, high-performance rocket engines. Included in the analysis were: centrifugal, pitot, Barske, Tesla, drag, gear, vane, axial piston, radial piston, diaphragm, and helirotor pump concepts. The centrifugal pump and the gear pump were selected and these were carried through detailed design and fabrication. Mechanical difficulties were encountered with the gear pump during the preliminary tests in Freon-12. Further testing and development was therefore limited to the centrifugal pump. Tests on the centrifugal pump were conducted in Freon-12 to determine the hydrodynamic performance and in liquid fluorine to demonstrate chemical compatibility.

Ubiquitous healthy diatoms in the deep sea confirm deep carbon injection by the biological pump

PubMed Central

Agusti, S.; González-Gordillo, J. I.; Vaqué, D.; Estrada, M.; Cerezo, M. I.; Salazar, G.; Gasol, J. M.; Duarte, C. M.

2015-01-01

The role of the ocean as a sink for CO2 is partially dependent on the downward transport of phytoplankton cells packaged within fast-sinking particles. However, whether such fast-sinking mechanisms deliver fresh organic carbon down to the deep bathypelagic sea and whether this mechanism is prevalent across the ocean requires confirmation. Here we report the ubiquitous presence of healthy photosynthetic cells, dominated by diatoms, down to 4,000 m in the deep dark ocean. Decay experiments with surface phytoplankton suggested that the large proportion (18%) of healthy photosynthetic cells observed, on average, in the dark ocean, requires transport times from a few days to a few weeks, corresponding to sinking rates (124–732 m d−1) comparable to those of fast-sinking aggregates and faecal pellets. These results confirm the expectation that fast-sinking mechanisms inject fresh organic carbon into the deep sea and that this is a prevalent process operating across the global oligotrophic ocean. PMID:26158221

20. Station Unwatering Pumps and Sump Pump, view to the ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

20. Station Unwatering Pumps and Sump Pump, view to the north. The station unwatering pumps are the two large units in the center and right foreground of photograph and are marked with the numbers 1 and 2. The sump pump is the smaller unit in left foreground of photograph. These pumps are used for unwatering the draft chests for maintenance. Note the draft tube unwatering valve visible in background between the two unwatering pumps. - Washington Water Power Clark Fork River Noxon Rapids Hydroelectric Development, Powerhouse, South bank of Clark Fork River at Noxon Rapids, Noxon, Sanders County, MT

Ninth International Workshop on Plant Membrane Biology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1993-12-31

This report is a compilation of abstracts from papers which were discussed at a workshop on plant membrane biology. Topics include: plasma membrane ATP-ases; plant-environment interactions, membrane receptors; signal transduction; ion channel physiology; biophysics and molecular biology; vaculor H+ pumps; sugar carriers; membrane transport; and cellular structure and function.

Assessing ocean alkalinity for carbon sequestration

NASA Astrophysics Data System (ADS)

Renforth, Phil; Henderson, Gideon

2017-09-01

Over the coming century humanity may need to find reservoirs to store several trillions of tons of carbon dioxide (CO2) emitted from fossil fuel combustion, which would otherwise cause dangerous climate change if it were left in the atmosphere. Carbon storage in the ocean as bicarbonate ions (by increasing ocean alkalinity) has received very little attention. Yet recent work suggests sufficient capacity to sequester copious quantities of CO2. It may be possible to sequester hundreds of billions to trillions of tons of C without surpassing postindustrial average carbonate saturation states in the surface ocean. When globally distributed, the impact of elevated alkalinity is potentially small and may help ameliorate the effects of ocean acidification. However, the local impact around addition sites may be more acute but is specific to the mineral and technology. The alkalinity of the ocean increases naturally because of rock weathering in which >1.5 mol of carbon are removed from the atmosphere for every mole of magnesium or calcium dissolved from silicate minerals (e.g., wollastonite, olivine, and anorthite) and 0.5 mol for carbonate minerals (e.g., calcite and dolomite). These processes are responsible for naturally sequestering 0.5 billion tons of CO2 per year. Alkalinity is reduced in the ocean through carbonate mineral precipitation, which is almost exclusively formed from biological activity. Most of the previous work on the biological response to changes in carbonate chemistry have focused on acidifying conditions. More research is required to understand carbonate precipitation at elevated alkalinity to constrain the longevity of carbon storage. A range of technologies have been proposed to increase ocean alkalinity (accelerated weathering of limestone, enhanced weathering, electrochemical promoted weathering, and ocean liming), the cost of which may be comparable to alternative carbon sequestration proposals (e.g., $20-100 tCO2-1). There are still many

ELECTROMAGNETIC PUMP

DOEpatents

Pulley, O.O.

1954-08-17

This patent reiates to electromagnetic pumps for electricity-conducting fluids and, in particular, describes several modifications for a linear conduction type electromagnetic interaction pump. The invention resides in passing the return conductor for the current traversing the fiuid in the duct back through the gap in the iron circuit of the pump. Both the maximum allowable pressure and the efficiency of a linear conduction electromagnetic pump are increased by incorporation of the present invention.

Characterizing the phytoplankton soup: pump and plumbing effects on the particle assemblage in underway optical seawater systems.

PubMed

Cetinić, Ivona; Poulton, Nicole; Slade, Wayne H

2016-09-05

Many optical and biogeochemical data sets, crucial for algorithm development and satellite data validation, are collected using underway seawater systems over the course of research cruises. Phytoplankton and particle size distribution (PSD) in the ocean is a key measurement, required in oceanographic research and ocean optics. Using a data set collected in the North Atlantic, spanning different oceanic water types, we outline the differences observed in concurrent samples collected from two different flow-through systems: a permanently plumbed science seawater supply with an impeller pump, and an independent system with shorter, clean tubing runs and a diaphragm pump. We observed an average of 40% decrease in phytoplankton counts, and significant changes to the PSD in 10-45 µm range, when comparing impeller and diaphragm pump systems. Change in PSD seems to be more dependent on the type of the phytoplankton, than the size, with photosynthetic ciliates displaying the largest decreases in cell counts (78%). Comparison of chlorophyll concentrations across the two systems demonstrated lower sensitivity to sampling system type. Observed changes in several measured biogeochemical parameters (associated with phytoplankton size distribution) using the two sampling systems, should be used as a guide towards building best practices when it comes to the deployment of flow-through systems in the field for examining optics and biogeochemistry. Using optical models, we evaluated potential impact of the observed change in measured phytoplankton size spectra onto scattering measurements, resulting in significant differences between modeled optical properties across systems (~40%). Researchers should be aware of the methods used with previously collected data sets, and take into consideration the potentially significant and highly variable ecosystem-dependent biases in designing field studies in the future.

The ocean in near equilibrium with atmospheric methyl bromide

NASA Astrophysics Data System (ADS)

Hu, Lei; Yvon-Lewis, Shari; Liu, Yina; Bianchi, Thomas S.

2012-09-01

Saturation-anomaly measurements of methyl bromide (CH3Br) were made in the eastern Pacific (3/30-4/27, 2010) and the eastern Atlantic (10/25-11/26, 2010) to assess the oceanic saturation state as the phaseout of fumigation - non-Quarantine and Pre-Shipment (non-QPS) uses of CH3Br nears completion and atmospheric concentrations continue to decline. These cruises occurred 16 years after the Bromine Latitudinal Air-Sea Transect (BLAST) cruises, which were conducted in the same regions and first established a global oceanic net sink of -12.6 Gg yr-1 for atmospheric CH3Br in 1994. Results from this study suggest saturation anomalies of CH3Br in the surface ocean have become less negative than those observed 16 years ago as the atmospheric burden has declined over the past decade. The global net sea-to-air flux was estimated at 0 to 3 Gg yr-1 in 2010, suggesting that the ocean may become a net small source to atmospheric CH3Br. There are no significant differences between this study and previous studies for measured biological loss rate constants and calculated annual production rates, suggesting that annual production rates and biological degradation rate constants for CH3Br in the surface ocean have likely remained relatively constant over the past 16 years. When including the biological loss rate constants from this study and all previous studies, the mean global biological loss rate constant is constrained to 0.05 ± 0.01 d-1 (at a 95% confidence level). Combining chemical and eddy degradation rate constants, and using an updated gas transfer velocity, we estimate the CH3Br partial atmospheric lifetime with respect to oceanic loss to be 3.1 (2.3 to 5.0) years. Although the new partial atmospheric lifetime is about 1.3 years longer than the best prior estimate, it does not change the overall atmospheric lifetime of CH3Br, 0.8 (0.7-0.9) years.

Multidrug Efflux Pumps from Enterobacteriaceae, Vibrio cholerae and Staphylococcus aureus Bacterial Food Pathogens

PubMed Central

Andersen, Jody L.; He, Gui-Xin; Kakarla, Prathusha; KC, Ranjana; Kumar, Sanath; Lakra, Wazir Singh; Mukherjee, Mun Mun; Ranaweera, Indrika; Shrestha, Ugina; Tran, Thuy; Varela, Manuel F.

2015-01-01

Foodborne illnesses caused by bacterial microorganisms are common worldwide and constitute a serious public health concern. In particular, microorganisms belonging to the Enterobacteriaceae and Vibrionaceae families of Gram-negative bacteria, and to the Staphylococcus genus of Gram-positive bacteria are important causative agents of food poisoning and infection in the gastrointestinal tract of humans. Recently, variants of these bacteria have developed resistance to medically important chemotherapeutic agents. Multidrug resistant Escherichia coli, Salmonella enterica, Vibrio cholerae, Enterobacter spp., and Staphylococcus aureus are becoming increasingly recalcitrant to clinical treatment in human patients. Of the various bacterial resistance mechanisms against antimicrobial agents, multidrug efflux pumps comprise a major cause of multiple drug resistance. These multidrug efflux pump systems reside in the biological membrane of the bacteria and actively extrude antimicrobial agents from bacterial cells. This review article summarizes the evolution of these bacterial drug efflux pump systems from a molecular biological standpoint and provides a framework for future work aimed at reducing the conditions that foster dissemination of these multidrug resistant causative agents through human populations. PMID:25635914

Multidrug efflux pumps from Enterobacteriaceae, Vibrio cholerae and Staphylococcus aureus bacterial food pathogens.

PubMed

Andersen, Jody L; He, Gui-Xin; Kakarla, Prathusha; K C, Ranjana; Kumar, Sanath; Lakra, Wazir Singh; Mukherjee, Mun Mun; Ranaweera, Indrika; Shrestha, Ugina; Tran, Thuy; Varela, Manuel F

2015-01-28

Foodborne illnesses caused by bacterial microorganisms are common worldwide and constitute a serious public health concern. In particular, microorganisms belonging to the Enterobacteriaceae and Vibrionaceae families of Gram-negative bacteria, and to the Staphylococcus genus of Gram-positive bacteria are important causative agents of food poisoning and infection in the gastrointestinal tract of humans. Recently, variants of these bacteria have developed resistance to medically important chemotherapeutic agents. Multidrug resistant Escherichia coli, Salmonella enterica, Vibrio cholerae, Enterobacter spp., and Staphylococcus aureus are becoming increasingly recalcitrant to clinical treatment in human patients. Of the various bacterial resistance mechanisms against antimicrobial agents, multidrug efflux pumps comprise a major cause of multiple drug resistance. These multidrug efflux pump systems reside in the biological membrane of the bacteria and actively extrude antimicrobial agents from bacterial cells. This review article summarizes the evolution of these bacterial drug efflux pump systems from a molecular biological standpoint and provides a framework for future work aimed at reducing the conditions that foster dissemination of these multidrug resistant causative agents through human populations.

Four simple ocean carbon models

NASA Technical Reports Server (NTRS)

Moore, Berrien, III

1992-01-01

This paper briefly reviews the key processes that determine oceanic CO2 uptake and sets this description within the context of four simple ocean carbon models. These models capture, in varying degrees, these key processes and establish a clear foundation for more realistic models that incorporate more directly the underlying physics and biology of the ocean rather than relying on simple parametric schemes. The purpose of this paper is more pedagogical than purely scientific. The problems encountered by current attempts to understand the global carbon cycle not only require our efforts but set a demand for a new generation of scientist, and it is hoped that this paper and the text in which it appears will help in this development.

Importance of salt fingering for new nitrogen supply in the oligotrophic ocean.

PubMed

Fernández-Castro, B; Mouriño-Carballido, B; Marañón, E; Chouciño, P; Gago, J; Ramírez, T; Vidal, M; Bode, A; Blasco, D; Royer, S-J; Estrada, M; Simó, R

2015-09-09

The input of new nitrogen into the euphotic zone constrains the export of organic carbon to the deep ocean and thereby the biologically mediated long-term CO2 exchange between the ocean and atmosphere. In low-latitude open-ocean regions, turbulence-driven nitrate diffusion from the ocean's interior and biological fixation of atmospheric N2 are the main sources of new nitrogen for phytoplankton productivity. With measurements across the tropical and subtropical Atlantic, Pacific and Indian oceans, we show that nitrate diffusion (171±190 μmol m(-2) d(-1)) dominates over N2 fixation (9.0±9.4 μmol m(-2) d(-1)) at the time of sampling. Nitrate diffusion mediated by salt fingers is responsible for ca. 20% of the new nitrogen supply in several provinces of the Atlantic and Indian Oceans. Our results indicate that salt finger diffusion should be considered in present and future ocean nitrogen budgets, as it could supply globally 0.23-1.00 Tmol N yr(-1) to the euphotic zone.

The Ocean's Carbon Factory: Ocean Composition. The Growth Patterns of Phytoplankton Species

NASA Technical Reports Server (NTRS)

Gregg, Watson

2000-01-01

According to biological data recorded by the Sea-Viewing Wide Field-of-View Sensor (SeaWiFS) satellite, the ocean contains nearly half of all the Earth's photosynthesis activity. Through photosynthesis, plant life forms use carbon from the atmosphere, and in return, plants produce the oxygen that life requires. In effect, ocean chlorophyll works like a factory, taking carbon and "manufacturing" the air we breathe. Most ocean-bound photosynthesis is performed by single-celled plants called phytoplankton. "These things are so small," according to Michael Behrenfeld, a researcher at NASA Goddard Space Flight Center, "that if you take hundreds of them and stack them end-to-end, the length of that stack is only the thickness of a penny". The humble phytoplankton species plays a vital role in balancing the amounts of oxygen and carbon dioxide in the atmosphere. Therefore, understanding exactly how phytoplankton growth works is important.

Sea ice, extremophiles and life on extra-terrestrial ocean worlds

NASA Astrophysics Data System (ADS)

Martin, Andrew; McMinn, Andrew

2018-01-01

The primary aim of this review is to highlight that sea-ice microbes would be capable of occupying ice-associated biological niches on Europa and Enceladus. These moons are compelling targets for astrobiological exploration because of the inferred presence of subsurface oceans that have persisted over geological timescales. Although potentially hostile to life in general, Europa and Enceladus may still harbour biologically permissive domains associated with the ice, ocean and seafloor environments. However, validating sources of free energy is challenging, as is qualifying possible metabolic processes or ecosystem dynamics. Here, the capacity for biological adaptation exhibited by microorganisms that inhabit sea ice is reviewed. These ecosystems are among the most relevant Earth-based analogues for considering life on ocean worlds because microorganisms must adapt to multiple physicochemical extremes. In future, these organisms will likely play a significant role in defining the constraints on habitability beyond Earth and developing a mechanistic framework that contrasts the limits of Earth's biosphere with extra-terrestrial environments of interest.

Impact of glacial/interglacial sea level change on the ocean nitrogen cycle.

PubMed

Ren, Haojia; Sigman, Daniel M; Martínez-García, Alfredo; Anderson, Robert F; Chen, Min-Te; Ravelo, Ana Christina; Straub, Marietta; Wong, George T F; Haug, Gerald H

2017-08-15

The continental shelves are the most biologically dynamic regions of the ocean, and they are extensive worldwide, especially in the western North Pacific. Their area has varied dramatically over the glacial/interglacial cycles of the last million years, but the effects of this variation on ocean biological and chemical processes remain poorly understood. Conversion of nitrate to N 2 by denitrification in sediments accounts for half or more of the removal of biologically available nitrogen ("fixed N") from the ocean. The emergence of continental shelves during ice ages and their flooding during interglacials have been hypothesized to drive changes in sedimentary denitrification. Denitrification leads to the occurrence of phosphorus-bearing, N-depleted surface waters, which encourages N 2 fixation, the dominant N input to the ocean. An 860,000-y record of foraminifera shell-bound N isotopes from the South China Sea indicates that N 2 fixation covaried with sea level. The N 2 fixation changes are best explained as a response to changes in regional excess phosphorus supply due to sea level-driven variations in shallow sediment denitrification associated with the cyclic drowning and emergence of the continental shelves. This hypothesis is consistent with a glacial ocean that hosted globally lower rates of fixed N input and loss and a longer residence time for oceanic fixed N-a "sluggish" ocean N budget during ice ages. In addition, this work provides a clear sign of sea level-driven glacial/interglacial oscillations in biogeochemical fluxes at and near the ocean margins, with implications for coastal organisms and ecosystems.

Impact of glacial/interglacial sea level change on the ocean nitrogen cycle

NASA Astrophysics Data System (ADS)

Ren, Haojia; Sigman, Daniel M.; Martínez-García, Alfredo; Anderson, Robert F.; Chen, Min-Te; Ravelo, Ana Christina; Straub, Marietta; Wong, George T. F.; Haug, Gerald H.

2017-08-01

The continental shelves are the most biologically dynamic regions of the ocean, and they are extensive worldwide, especially in the western North Pacific. Their area has varied dramatically over the glacial/interglacial cycles of the last million years, but the effects of this variation on ocean biological and chemical processes remain poorly understood. Conversion of nitrate to N2 by denitrification in sediments accounts for half or more of the removal of biologically available nitrogen (“fixed N”) from the ocean. The emergence of continental shelves during ice ages and their flooding during interglacials have been hypothesized to drive changes in sedimentary denitrification. Denitrification leads to the occurrence of phosphorus-bearing, N-depleted surface waters, which encourages N2 fixation, the dominant N input to the ocean. An 860,000-y record of foraminifera shell-bound N isotopes from the South China Sea indicates that N2 fixation covaried with sea level. The N2 fixation changes are best explained as a response to changes in regional excess phosphorus supply due to sea level-driven variations in shallow sediment denitrification associated with the cyclic drowning and emergence of the continental shelves. This hypothesis is consistent with a glacial ocean that hosted globally lower rates of fixed N input and loss and a longer residence time for oceanic fixed N—a “sluggish” ocean N budget during ice ages. In addition, this work provides a clear sign of sea level-driven glacial/interglacial oscillations in biogeochemical fluxes at and near the ocean margins, with implications for coastal organisms and ecosystems.

Impact of glacial/interglacial sea level change on the ocean nitrogen cycle

PubMed Central

Ren, Haojia; Sigman, Daniel M.; Martínez-García, Alfredo; Anderson, Robert F.; Chen, Min-Te; Ravelo, Ana Christina; Straub, Marietta; Wong, George T. F.; Haug, Gerald H.

2017-01-01

The continental shelves are the most biologically dynamic regions of the ocean, and they are extensive worldwide, especially in the western North Pacific. Their area has varied dramatically over the glacial/interglacial cycles of the last million years, but the effects of this variation on ocean biological and chemical processes remain poorly understood. Conversion of nitrate to N2 by denitrification in sediments accounts for half or more of the removal of biologically available nitrogen (“fixed N”) from the ocean. The emergence of continental shelves during ice ages and their flooding during interglacials have been hypothesized to drive changes in sedimentary denitrification. Denitrification leads to the occurrence of phosphorus-bearing, N-depleted surface waters, which encourages N2 fixation, the dominant N input to the ocean. An 860,000-y record of foraminifera shell-bound N isotopes from the South China Sea indicates that N2 fixation covaried with sea level. The N2 fixation changes are best explained as a response to changes in regional excess phosphorus supply due to sea level-driven variations in shallow sediment denitrification associated with the cyclic drowning and emergence of the continental shelves. This hypothesis is consistent with a glacial ocean that hosted globally lower rates of fixed N input and loss and a longer residence time for oceanic fixed N—a “sluggish” ocean N budget during ice ages. In addition, this work provides a clear sign of sea level-driven glacial/interglacial oscillations in biogeochemical fluxes at and near the ocean margins, with implications for coastal organisms and ecosystems. PMID:28760968

Present and Past Impact of Glacially Sourced Dust on Iron Fertilization of the Southern Ocean

NASA Astrophysics Data System (ADS)

Shoenfelt, E. M.; Winckler, G.; Kaplan, M. R.; Sambrotto, R.; Bostick, B. C.

2016-12-01

An increase in iron-containing dust flux and a more efficient biological pump in the Southern Ocean have been associated with the CO2 drawdown and global cooling of the Last Glacial Maximum (LGM). While iron (Fe) mineralogy is known to affect Fe bioavailability through its impact on Fe solubility, there are limited studies investigating the importance of Fe mineralogy in dust fluxes to the Southern Ocean, and no previous studies investigating interactions between eukaryotic phytoplankton and particulate-phase Fe in natural dusts applicable to Southern Ocean environments. Since physically weathered bedrock becomes less soluble as it becomes weathered and oxidized, we hypothesized that glacially sourced dusts would contain more Fe(II)-rich primary minerals and would be more bioavailable than dusts from areas not impacted by glaciers. We used a series of natural dusts from Patagonia as the sole Fe source in incubation experiments with the model diatom Phaeodactylum tricornutum, and evaluated Fe bioavailability using culture growth rates, cell density, and variable fluorescence. Monod curves were also used to evaluate the efficiency of the different particulates as sources of nutrient Fe. Using these Monod curves fit to growth rates plotted against particulate Fe concentrations, we observed that 1) Fe(II)-rich primary silicates were significantly more effective as an Fe source to diatoms than Fe(III)-rich oxides, that 2) Fe(II) content itself was responsible for the difference in Fe bioavailability/efficiency of the Fe nutrient source, and that 3) surface interactions with the particulates were important. In an effort to explore the possibility that Fe mineralogy impacted Fe bioavailability in past oceans, we will present our hypotheses regarding productivity and Fe mineralogy/bioavailability through the last glacial cycle.

Combining Satellite and in Situ Data with Models to Support Climate Data Records in Ocean Biology

NASA Technical Reports Server (NTRS)

Gregg, Watson

2011-01-01

by solar zenith angle requirements and obscuration from clouds and aerosols. Combined with in situ dataenhanced satellite data, the model is forced into consistency using data assimilation. This approach eliminates sampling discrepancies from satellites. Combining the reduced differences of satellite data sets using in situ data, and the removal of sampling biases using data assimilation, we generate consistent data records of ocean color. These data records can support investigations of long-term effects of climate change on ocean biology over multiple satellites, and can improve the consistency of future satellite data sets.

PUMPS

DOEpatents

Thornton, J.D.

1959-03-24

A pump is described for conveving liquids, particure it is not advisable he apparatus. The to be submerged in the liquid to be pumped, a conduit extending from the high-velocity nozzle of the injector,and means for applying a pulsating prcesure to the surface of the liquid in the conduit, whereby the surface oscillates between positions in the conduit. During the positive half- cycle of an applied pulse liquid is forced through the high velocity nozzle or jet of the injector and operates in the manner of the well known water injector and pumps liquid from the main intake to the outlet of the injector. During the negative half-cycle of the pulse liquid flows in reverse through the jet but no reverse pumping action takes place.

Monitoring and assessment of ocean acidification in the Arctic Ocean-A scoping paper

USGS Publications Warehouse

Robbins, Lisa L.; Yates, Kimberly K.; Feely, Richard; Fabry, Victoria

2010-01-01

Carbon dioxide (CO2) in the atmosphere is absorbed at the ocean surface by reacting with seawater to form a weak, naturally occurring acid called carbonic acid. As atmospheric carbon dioxide increases, the concentration of carbonic acid in seawater also increases, causing a decrease in ocean pH and carbonate mineral saturation states, a process known as ocean acidification. The oceans have absorbed approximately 525 billion tons of carbon dioxide from the atmosphere, or about one-quarter to one-third of the anthropogenic carbon emissions released since the beginning of the Industrial Revolution. Global surveys of ocean chemistry have revealed that seawater pH has decreased by about 0.1 units (from a pH of 8.2 to 8.1) since the 1700s due to absorption of carbon dioxide (Raven and others, 2005). Modeling studies, based on Intergovernmental Panel on Climate Change (IPCC) CO2 emission scenarios, predict that atmospheric carbon dioxide levels could reach more than 500 parts per million (ppm) by the middle of this century and 800 ppm by the year 2100, causing an additional decrease in surface water pH of 0.3 pH units. Ocean acidification is a global threat and is already having profound and deleterious effects on the geology, biology, chemistry, and socioeconomic resources of coastal and marine habitats. The polar and sub-polar seas have been identified as the bellwethers for global ocean acidification.

Ocean science: The rise of Rhizaria

NASA Astrophysics Data System (ADS)

Caron, David A.

2016-04-01

Large amoeba-like organisms known as Rhizaria have often been overlooked in studies of ocean biology and biogeochemistry. Underwater imaging and ecological network analyses are revealing their roles. See Article p.465 & Letter p.504

An Ecosystem Model for the Simulation of Physical and Biological Oceanic Processes-IDAPAK User's Guide and Applications

NASA Technical Reports Server (NTRS)

McClain, Charles R.; Arrigo, Kevin; Murtugudde, Ragu; Signorini, Sergio R.; Tai, King-Sheng

1998-01-01

This TM describes the development, testing, and application of a 4-component (phytoplankton, zooplankton, nitrate, and ammonium) ecosystem model capable of simulating oceanic biological processes. It also reports and documents an in-house software package (Interactive Data Analysis Package - IDAPAK) for interactive data analysis of geophysical fields, including those related to the forcing, verification, and analysis of the ecosystem model. Two regions were studied in the Pacific: the Warm Pool (WP) in the Equatorial Pacific (165 deg. E at the equator) and at Ocean Weather Station P (OWS P) in the Northeast Pacific (50 deg. N, 145 deg. W). The WP results clearly indicate that the upwelling at 100 meters correlates well with surface blooms. The upwelling events in late 1987 and 1990 produced dramatic increases in the surface layer values of all 4 ecosystem components, whereas the spring-summer deep mixing events, do not seem to incur a significant response in any of the ecosystem quantities. The OWS P results show that the monthly profiles of temperature, the annual cycles of solar irradiance, and 0- to 50-m integrated nitrate accurately reproduce observed values. Annual primary production is 190 gC/m(exp 2)/yr, which is consistent with recent observations but is much greater than earlier estimates.

High-speed femtosecond pump-probe spectroscopy with a smart pixel detector array.

PubMed

Bourquin, S; Prasankumar, R P; Kärtner, F X; Fujimoto, J G; Lasser, T; Salathé, R P

2003-09-01

A new femtosecond pump-probe spectroscopy technique is demonstrated that permits the high-speed, parallel acquisition of pump-probe measurements at multiple wavelengths. This is made possible by use of a novel, two-dimensional smart pixel detector array that performs amplitude demodulation in real time on each pixel. This detector array can not only achieve sensitivities comparable with lock-in amplification but also simultaneously performs demodulation of probe transmission signals at multiple wavelengths, thus permitting rapid time- and wavelength-resolved femtosecond pump-probe spectroscopy. Measurements on a thin sample of bulk GaAs are performed across 58 simultaneous wavelengths. Differential probe transmission changes as small as approximately 2 x 10(-4) can be measured over a 5-ps delay scan in only approximately 3 min. This technology can be applied to a wide range of pump-probe measurements in condensed matter, chemistry, and biology.

Iron budgets for three distinct biogeochemical sites around the Kerguelen Archipelago (Southern Ocean) during the natural fertilisation study, KEOPS-2

NASA Astrophysics Data System (ADS)

Bowie, A. R.; van der Merwe, P.; Quéroué, F.; Trull, T.; Fourquez, M.; Planchon, F.; Sarthou, G.; Chever, F.; Townsend, A. T.; Obernosterer, I.; Sallée, J.-B.; Blain, S.

2015-07-01

Iron availability in the Southern Ocean controls phytoplankton growth, community composition and the uptake of atmospheric CO2 by the biological pump. The KEOPS-2 (KErguelen Ocean and Plateau compared Study 2) "process study", took place around the Kerguelen Plateau in the Indian sector of the Southern Ocean. This is a region naturally fertilised with iron on the scale of hundreds to thousands of square kilometres, producing a mosaic of spring blooms which show distinct biological and biogeochemical responses to fertilisation. This paper presents biogeochemical iron budgets (incorporating vertical and lateral supply, internal cycling, and sinks) for three contrasting sites: an upstream high-nutrient low-chlorophyll reference, over the plateau and in the offshore plume east of the Kerguelen Islands. These budgets show that distinct regional environments driven by complex circulation and transport pathways are responsible for differences in the mode and strength of iron supply, with vertical supply dominant on the plateau and lateral supply dominant in the plume. Iron supply from "new" sources (diffusion, upwelling, entrainment, lateral advection, atmospheric dust) to the surface waters of the plume was double that above the plateau and 20 times greater than at the reference site, whilst iron demand (measured by cellular uptake) in the plume was similar to that above the plateau but 40 times greater than at the reference site. "Recycled" iron supply by bacterial regeneration and zooplankton grazing was a relatively minor component at all sites (< 8 % of new supply), in contrast to earlier findings from other biogeochemical iron budgets in the Southern Ocean. Over the plateau, a particulate iron dissolution term of 2.5 % was invoked to balance the budget; this approximately doubled the standing stock of dissolved iron in the mixed layer. The exchange of iron between dissolved, biogenic particulate and lithogenic particulate pools was highly dynamic in time and space

Multiple pump housing

DOEpatents

Donoho, II, Michael R.; Elliott; Christopher M.

2010-03-23

A fluid delivery system includes a first pump having a first drive assembly, a second pump having a second drive assembly, and a pump housing. At least a portion of each of the first and second pumps are located in the housing.

Winding for linear pump

DOEpatents

Kliman, G.B.; Brynsvold, G.V.; Jahns, T.M.

1989-08-22

A winding and method of winding for a submersible linear pump for pumping liquid sodium are disclosed. The pump includes a stator having a central cylindrical duct preferably vertically aligned. The central vertical duct is surrounded by a system of coils in slots. These slots are interleaved with magnetic flux conducting elements, these magnetic flux conducting elements forming a continuous magnetic field conduction path along the stator. The central duct has placed therein a cylindrical magnetic conducting core, this core having a cylindrical diameter less than the diameter of the cylindrical duct. The core once placed to the duct defines a cylindrical interstitial pumping volume of the pump. This cylindrical interstitial pumping volume preferably defines an inlet at the bottom of the pump, and an outlet at the top of the pump. Pump operation occurs by static windings in the outer stator sequentially conveying toroidal fields from the pump inlet at the bottom of the pump to the pump outlet at the top of the pump. The winding apparatus and method of winding disclosed uses multiple slots per pole per phase with parallel winding legs on each phase equal to or less than the number of slots per pole per phase. The slot sequence per pole per phase is chosen to equalize the variations in flux density of the pump sodium as it passes into the pump at the pump inlet with little or no flux and acquires magnetic flux in passage through the pump to the pump outlet. 4 figs.

Winding for linear pump

DOEpatents

Kliman, Gerald B.; Brynsvold, Glen V.; Jahns, Thomas M.

1989-01-01

A winding and method of winding for a submersible linear pump for pumping liquid sodium is disclosed. The pump includes a stator having a central cylindrical duct preferably vertically aligned. The central vertical duct is surrounded by a system of coils in slots. These slots are interleaved with magnetic flux conducting elements, these magnetic flux conducting elements forming a continuous magnetic field conduction path along the stator. The central duct has placed therein a cylindrical magnetic conducting core, this core having a cylindrical diameter less than the diameter of the cylindrical duct. The core once placed to the duct defines a cylindrical interstitial pumping volume of the pump. This cylindrical interstitial pumping volume preferably defines an inlet at the bottom of the pump, and an outlet at the top of the pump. Pump operation occurs by static windings in the outer stator sequentially conveying toroidal fields from the pump inlet at the bottom of the pump to the pump outlet at the top of the pump. The winding apparatus and method of winding disclosed uses multiple slots per pole per phase with parallel winding legs on each phase equal to or less than the number of slots per pole per phase. The slot sequence per pole per phase is chosen to equalize the variations in flux density of the pump sodium as it passes into the pump at the pump inlet with little or no flux and acquires magnetic flux in passage through the pump to the pump outlet.

Equatorial Wave Line, Pacific Ocean

NASA Image and Video Library

1993-01-19

STS054-95-042 (13-19 Jan 1993) --- The Equatorial Pacific Ocean is represented in this 70mm view. The international oceanographic research community is presently conducting a program called Joint Global Ocean Flux Study (JGOFS) to study the global ocean carbon budget. A considerable amount of effort within this program is presently being focused on the Equatorial Pacific Ocean because of the high annual average biological productivity. The high productivity is the result of nearly constant easterly winds causing cool, nutrient-rich water to well up at the equator. In this view of the sun glint pattern was photographed at about 2 degrees north latitude, 103 degrees west longitude, as the Space Shuttle passed over the Equatorial Pacific. The long narrow line is the equatorial front, which defines the boundary between warm surface equatorial water and cool, recently upwelled water. Such features are of interest to the JGOFS researchers and it is anticipated that photographs such as this will benefit the JGOFS program.

5. Station Unwatering Pumps and Sump Pump for Units 1 ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

5. Station Unwatering Pumps and Sump Pump for Units 1 and 2, view to the west. The unwatering pumps are the two larger items toward the right side of the photograph (one in foreground and one in background. The smaller item toward the left of the photograph is the sump pump. These pumps are used for draining water from the draft chest for maintenance. - Washington Water Power Clark Fork River Cabinet Gorge Hydroelectric Development, Powerhouse, North Bank of Clark Fork River at Cabinet Gorge, Cabinet, Bonner County, ID

Iron budgets for three distinct biogeochemical sites around the Kerguelen archipelago (Southern Ocean) during the natural fertilisation experiment KEOPS-2

NASA Astrophysics Data System (ADS)

Bowie, A. R.; van der Merwe, P.; Quéroué, F.; Trull, T.; Fourquez, M.; Planchon, F.; Sarthou, G.; Chever, F.; Townsend, A. T.; Obernosterer, I.; Sallée, J.-B.; Blain, S.

2014-12-01

Iron availability in the Southern Ocean controls phytoplankton growth, community composition and the uptake of atmospheric CO2 by the biological pump. The KEOPS-2 experiment took place around the Kerguelen plateau in the Indian sector of the Southern Ocean, a region naturally fertilised with iron at the scale of hundreds to thousands of square kilometres, producing a mosaic of spring blooms which showed distinct biological and biogeochemical responses to fertilisation. This paper presents biogeochemical iron budgets (incorporating vertical and lateral supply, internal cycling, and sinks) for three contrasting sites: an upstream high-nutrient low-chlorophyll reference, over the plateau, and in the offshore plume east of Kerguelen Island. These budgets show that distinct regional environments driven by complex circulation and transport pathways are responsible for differences in the mode and strength of iron supply, with vertical supply dominant on the plateau and lateral supply dominant in the plume. Iron supply from "new" sources to surface waters of the plume was double that above the plateau and 20 times greater than at the reference site, whilst iron demand (measured by cellular uptake) in the plume was similar to the plateau but 40 times greater than the reference. "Recycled" iron supply by bacterial regeneration and zooplankton grazing was a relative minor component at all sites (<8% of "new" supply), in contrast to earlier findings from other biogeochemical iron budgets in the Southern Ocean. Over the plateau, a particulate iron dissolution term of 2.5% was invoked to balance the budget; this approximately doubled the standing stock of dissolved iron in the mixed layer. The exchange of iron between dissolved, biogenic and lithogenic particulate pools was highly dynamic in time and space, resulting in a decoupling of iron supply and carbon export and, importantly, controlling the efficiency of fertilisation.

A new blood pump for cardiopulmonary bypass: the HiFlow centrifugal pump.

PubMed

Göbel, C; Eilers, R; Reul, H; Schwindke, P; Jörger, M; Rau, G

1997-07-01

Centrifugal blood pumps are considered to be generally superior to the traditionally used roller pumps in cardiopulmonary bypass. In our institute a new lightweight centrifugal sealless blood pump with a unique spherical thrust bearing and with a magnetic coupling was developed, the HiFlow. The small design makes the pump suitable for applications in complex devices or close to a patient. Hemolysis tests were carried out in which the BioMedicus pump BP-80 and a roller pump were used as reference. The centrifugal pump HiFlow showed the least blood trauma within the group of investigated pumps. In summary, the HiFlow pump concept with its low priming volume and limited contact surfaces shows great potential for clinical applications in cardiopulmonary bypass. Also, the possibility of using the pump as a short-term assist device with an option of a pulsatile driving mode was demonstrated.

Oceanographic, Air-sea Interaction, and Environmental Aspects of Artificial Upwelling Produced by Wave-Inertia Pumps for Potential Hurricane Intensity Mitigation

NASA Astrophysics Data System (ADS)

Soloviev, A.; Dean, C.

2017-12-01

The artificial upwelling system consisting of the wave-inertia pumps driven by surface waves can produce flow of cold deep water to the surface. One of the recently proposed potential applications of the artificial upwelling system is the hurricane intensity mitigation. Even relatively small reduction of intensity may provide significant benefits. The ocean heat content (OHC) is the "fuel" for hurricanes. The OHC can be reduced by mixing of the surface layer with the cold water produced by wave-inertia pumps. Implementation of this system for hurricane mitigation has several oceanographic and air-sea interaction aspects. The cold water brought to the surface from a deeper layer has higher density than the surface water and, therefore, tends to sink back down. The mixing of the cold water produced by artificial upwelling depends on environmental conditions such as stratification, regional ocean circulation, and vertical shear. Another aspect is that as the sea surface temperature drops below the air temperature, the stable stratification develops in the atmospheric boundary layer. The stable atmospheric stratification suppresses sensible and latent heat air-sea fluxes and reduces the net longwave irradiance from the sea surface. As a result, the artificial upwelling may start increasing the OHC (though still reducing the sea surface temperature). In this work, the fate of the cold water in the stratified environment with vertical shear has been studied using computational fluid dynamics (CFD) tools. A 3D large eddy simulation model is initialized with observational temperature, salinity, and current velocity data from a sample location in the Straits of Florida. A periodic boundary condition is set along the direction of the current, which allows us to simulate infinite fetch. The model results indicate that the cold water brought to the sea surface by a wave-inertia pump forms a convective jet. This jet plunges into the upper ocean mixed layer and penetrates the

Evaluation of the Coreless Linear Conduction Pump for Thermoelectromagnetic Pumps,

DTIC Science & Technology

1991-08-01

Accession Number: 4466 Publication Date: Aug 01, 1991 Title: Evaluation of the Coreless Linear Conduction Pump for Thermoelectromagnetic Pumps ...083191 Report Prepared for: SDIO/T/SL, Washington, DC 20301-7100 Descriptors, Keywords: Coreless Linear Conduction Pump Thermoelectromagnetic...000001 Record ID: 26727 SUMMARY The purpose of the Coreless Linear Conduction Pump (CLCP) was to evaluate the feasibility of the CLCP as a means of

Ecological response to collapse of the biological pump following the mass extinction at the Cretaceous-Paleogene boundary

NASA Astrophysics Data System (ADS)

Vellekoop, Johan; Woelders, Lineke; Açikalin, Sanem; Smit, Jan; van de Schootbrugge, Bas; Yilmaz, Ismail Ö.; Brinkhuis, Henk; Speijer, Robert P.

2017-02-01

It is commonly accepted that the mass extinction associated with the Cretaceous-Paleogene (K-Pg) boundary (˜ 66 Ma) is related to the environmental effects of a large extraterrestrial impact. The biological and oceanographic consequences of the mass extinction are, however, still poorly understood. According to the Living Ocean model, the biological crisis at the K-Pg boundary resulted in a long-term reduction of export productivity in the early Paleocene. Here, we combine organic-walled dinoflagellate cyst (dinocyst) and benthic foraminiferal analyses to provide new insights into changes in the coupling of pelagic and benthic ecosystems. To this end, we perform dinocyst and benthic foraminiferal analyses on the recently discovered Tethyan K-Pg boundary section at Okçular, Turkey, and compare the results with other K-Pg boundary sites in the Tethys. The post-impact dominance of epibenthic morphotypes and an increase of inferred heterotrophic dinocysts in the early Paleocene at Okçular are consistent with published records from other western Tethyan sites. Together, these records indicate that during the early Paleocene more nutrients remained available for the Tethyan planktonic community, whereas benthic communities were deprived of food. Hence, in the post-impact phase the reduction of export productivity likely resulted in enhanced recycling of nutrients in the upper part of the water column, all along the western Tethyan margins.

MEDUSA-2.0: an intermediate complexity biogeochemical model of the marine carbon cycle for climate change and ocean acidification studies

NASA Astrophysics Data System (ADS)

Yool, A.; Popova, E. E.; Anderson, T. R.

2013-10-01

MEDUSA-1.0 (Model of Ecosystem Dynamics, nutrient Utilisation, Sequestration and Acidification) was developed as an "intermediate complexity" plankton ecosystem model to study the biogeochemical response, and especially that of the so-called "biological pump", to anthropogenically driven change in the World Ocean (Yool et al., 2011). The base currency in this model was nitrogen from which fluxes of organic carbon, including export to the deep ocean, were calculated by invoking fixed C:N ratios in phytoplankton, zooplankton and detritus. However, due to anthropogenic activity, the atmospheric concentration of carbon dioxide (CO2) has significantly increased above its natural, inter-glacial background. As such, simulating and predicting the carbon cycle in the ocean in its entirety, including ventilation of CO2 with the atmosphere and the resulting impact of ocean acidification on marine ecosystems, requires that both organic and inorganic carbon be afforded a more complete representation in the model specification. Here, we introduce MEDUSA-2.0, an expanded successor model which includes additional state variables for dissolved inorganic carbon, alkalinity, dissolved oxygen and detritus carbon (permitting variable C:N in exported organic matter), as well as a simple benthic formulation and extended parameterizations of phytoplankton growth, calcification and detritus remineralisation. A full description of MEDUSA-2.0, including its additional functionality, is provided and a multi-decadal spin-up simulation (1860-2005) is performed. The biogeochemical performance of the model is evaluated using a diverse range of observational data, and MEDUSA-2.0 is assessed relative to comparable models using output from the Coupled Model Intercomparison Project (CMIP5).

Enhancing Ocean Research Data Access

NASA Astrophysics Data System (ADS)

Chandler, Cynthia; Groman, Robert; Shepherd, Adam; Allison, Molly; Arko, Robert; Chen, Yu; Fox, Peter; Glover, David; Hitzler, Pascal; Leadbetter, Adam; Narock, Thomas; West, Patrick; Wiebe, Peter

2014-05-01

The Biological and Chemical Oceanography Data Management Office (BCO-DMO) works in partnership with ocean science investigators to publish data from research projects funded by the Biological and Chemical Oceanography Sections and the Office of Polar Programs Antarctic Organisms & Ecosystems Program at the U.S. National Science Foundation. Since 2006, researchers have been contributing data to the BCO-DMO data system, and it has developed into a rich repository of data from ocean, coastal and Great Lakes research programs. While the ultimate goal of the BCO-DMO is to ensure preservation of NSF funded project data and to provide open access to those data, achievement of those goals is attained through a series of related phases that benefits from active collaboration and cooperation with a large community of research scientists as well as curators of data and information at complementary data repositories. The BCO-DMO is just one of many intermediate data management centers created to facilitate long-term preservation of data and improve access to ocean research data. Through partnerships with other data management professionals and active involvement in local and global initiatives, BCO-DMO staff members are working to enhance access to ocean research data available from the online BCO-DMO data system. Continuing efforts in use of controlled vocabulary terms, development of ontology design patterns and publication of content as Linked Open Data are contributing to improved discovery and availability of BCO-DMO curated data and increased interoperability of related content available from distributed repositories. We will demonstrate how Semantic Web technologies (e.g. RDF/XML, SKOS, OWL and SPARQL) have been integrated into BCO-DMO data access and delivery systems to better serve the ocean research community and to contribute to an expanding global knowledge network.

Mussel byssus attachment weakened by ocean acidification

NASA Astrophysics Data System (ADS)

O'Donnell, Michael J.; George, Matthew N.; Carrington, Emily

2013-06-01

Biomaterials connect organisms to their environments. Their function depends on biological, chemical and environmental factors, both at the time of creation and throughout the life of the material. Shifts in the chemistry of the oceans driven by anthropogenic CO2 (termed ocean acidification) have profound implications for the function of critical materials formed under these altered conditions. Most ocean acidification studies have focused on one biomaterial (secreted calcium carbonate), frequently using a single assay (net rate of calcification) to quantify whether reductions in environmental pH alter how organisms create biomaterials. Here, we examine biological structures critical for the success of ecologically and economically important bivalve molluscs. One non-calcified material, the proteinaceous byssal threads that anchor mytilid mussels to hard substrates, exhibited reduced mechanical performance when secreted under elevated pCO2 conditions, whereas shell and tissue growth were unaffected. Threads made under high pCO2 (>1,200μatm) were weaker and less extensible owing to compromised attachment to the substratum. According to a mathematical model, this reduced byssal fibre performance, decreasing individual tenacity by 40%. In the face of ocean acidification, weakened attachment presents a potential challenge for suspension-culture mussel farms and for intertidal communities anchored by mussel beds.

Multichannel seismic/oceanographic/biological monitoring of the oceans

NASA Astrophysics Data System (ADS)

Hello, Y.; Leymarie, E.; Ogé, A.; Poteau, A.; Argentino, J.; Sukhovich, A.; Claustre, H.; Nolet, G.

2011-12-01

Delays in seismic P wave are used to make scans or 3D images of the variations in seismic wave speed in the Earth's interior using the techniques of seismic tomography. Observations of such delays are ubiquitous on the continents but rare in oceanic regions. Free-drifting profiling floats that measure the temperature, salinity and current of the upper 2000 m of the ocean are used by physical oceanographers for continuous monitoring in the Argo program. Recently, seismologists developed the idea to use such floats in order to compensate for the lack of seismic delay observations, especially in the southern hemisphere. In project Globalseis, financed by a grant from the European Research Council (ERC), we have developed and tested a prototype of such a seismological sensor using an Apex float from Teledyne Webb Research, a Rafos hydrophone, and electronics developed in collaboration with Osean, a small engineering firm in France. `MERMAID', for `Mobile Earthquake Recorder in Marine Areas by Independent Divers' is approaching its final design and should become available off the shelf in 2012. In the meantime we initiated a collaboration between Globalseis and another ERC project, remOcean, for the acquisition of radiometric, bio-geochemical data and meteorological observations in addition to salinity and temperature (Bio-Argo program). In this collaboration of Geoazur and LOV (Laboratoire d'Océanologie de Villefranche sur mer), two laboratories located at the Observatory of Villefranche, we developed a multichannel acquisition hardware electronics called 'PAYLOAD' that allows commercial floats such as Apex (TWR) and Provor (NKE) to serve multiple observing missions simultaneously. Based on an algorithm using wavelet transforms PAYLOAD continuously analyzes acoustic signals to detect major seismic events and weather phenomena such rain, drizzle, open sea and ice during drift diving phase. The bio-geochemical and other parameters are recorded and analyzed during ascent

A calcium isotope test of end-Permian ocean acidification using biogenic apatite

NASA Astrophysics Data System (ADS)

Hinojosa, J.; Brown, S. T.; DePaolo, D. J.; Paytan, A.; Shen, S.; Chen, J.; Payne, J.

2011-12-01

Submarine erosional truncation of uppermost Permian carbonate strata has been interpreted to reflect ocean acidification coincident with the end-Permian mass extinction. Although this scenario is consistent with carbon isotope and paleontological data, several alternative scenarios, such as ocean overturn or collapse of the biological pump, can also account for the carbon isotope and paleontological evidence. Calcium isotopes provide a geochemical proxy to test between acidification and alternative scenarios. Specifically, a negative shift in the calcium isotope composition (δ44/40Ca) of seawater is predicted under the acidification scenario but not the alternatives. The δ44/40Ca of carbonate rocks from south China exhibits a negative excursion of approximately 0.3%, but this shift could result from either a change in the δ44/40Ca of seawater or a change in carbonate mineralogy because calcite and aragonite exhibit substantially different fractionation factors relative to seawater. To test whether the negative shift in δ44/40Ca reflects seawater δ44/40Ca or carbonate mineralogy, we measured the δ44/40Ca of conodont microfossils (calcium hydroxyapatite) from the global stratotype section for the Permian-Triassic boundary at Meishan, China. The conodont δ44/40Ca record shows a negative excursion similar in stratigraphic position and magnitude to that previously observed in carbonate rocks. Parallel negative excursions in the δ44/40Ca of carbonate rocks and conodont microfossils cannot be accounted for by a change in carbonate mineralogy but are consistent with a negative shift in the δ44/40Ca of seawater. These data add further support for the ocean acidification scenario, pointing toward strong similarities between the greatest catastrophe in the history of animal life and anticipated global change during the 21st century.

Remote Sensing of Ocean Color

NASA Astrophysics Data System (ADS)

Dierssen, Heidi M.; Randolph, Kaylan

The oceans cover over 70% of the earth's surface and the life inhabiting the oceans play an important role in shaping the earth's climate. Phytoplankton, the microscopic organisms in the surface ocean, are responsible for half of the photosynthesis on the planet. These organisms at the base of the food web take up light and carbon dioxide and fix carbon into biological structures releasing oxygen. Estimating the amount of microscopic phytoplankton and their associated primary productivity over the vast expanses of the ocean is extremely challenging from ships. However, as phytoplankton take up light for photosynthesis, they change the color of the surface ocean from blue to green. Such shifts in ocean color can be measured from sensors placed high above the sea on satellites or aircraft and is called "ocean color remote sensing." In open ocean waters, the ocean color is predominantly driven by the phytoplankton concentration and ocean color remote sensing has been used to estimate the amount of chlorophyll a, the primary light-absorbing pigment in all phytoplankton. For the last few decades, satellite data have been used to estimate large-scale patterns of chlorophyll and to model primary productivity across the global ocean from daily to interannual timescales. Such global estimates of chlorophyll and primary productivity have been integrated into climate models and illustrate the important feedbacks between ocean life and global climate processes. In coastal and estuarine systems, ocean color is significantly influenced by other light-absorbing and light-scattering components besides phytoplankton. New approaches have been developed to evaluate the ocean color in relationship to colored dissolved organic matter, suspended sediments, and even to characterize the bathymetry and composition of the seafloor in optically shallow waters. Ocean color measurements are increasingly being used for environmental monitoring of harmful algal blooms, critical coastal habitats

32. PLAN OF DEER ISLAND PUMPING STATION SHOWING EXISTING PUMPING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

32. PLAN OF DEER ISLAND PUMPING STATION SHOWING EXISTING PUMPING PLANT AND LOCATION OF PROPOSED ADDITIONS, JULY 1898 SHEET NO. 1. Aperture card 4966-1 - Deer Island Pumping Station, Boston, Suffolk County, MA

Will marine productivity wane?

NASA Astrophysics Data System (ADS)

Laufkötter, Charlotte; Gruber, Nicolas

2018-03-01

If marine algae are impaired severely by global climate change, the resulting reduction in marine primary production would strongly affect marine life and the ocean's biological pump that sequesters substantial amounts of atmospheric carbon dioxide in the ocean's interior. Most studies, including the latest generation of Earth system models, project only moderate global decreases in biological production until 2100 (1, 2), suggesting that these concerns are unwarranted. But on page 1139 of this issue, Moore et al. (3) show that this conclusion might be shortsighted and that there may be much larger long-term changes in ocean productivity than previously appreciated.

The Distribution of Dissolved Iron in the West Atlantic Ocean

PubMed Central

Rijkenberg, Micha J. A.; Middag, Rob; Laan, Patrick; Gerringa, Loes J. A.; van Aken, Hendrik M.; Schoemann, Véronique; de Jong, Jeroen T. M.; de Baar, Hein J. W.

2014-01-01

Iron (Fe) is an essential trace element for marine life. Extremely low Fe concentrations limit primary production and nitrogen fixation in large parts of the oceans and consequently influence ocean ecosystem functioning. The importance of Fe for ocean ecosystems makes Fe one of the core chemical trace elements in the international GEOTRACES program. Despite the recognized importance of Fe, our present knowledge of its supply and biogeochemical cycle has been limited by mostly fragmentary datasets. Here, we present highly accurate dissolved Fe (DFe) values measured at an unprecedented high intensity (1407 samples) along the longest full ocean depth transect (17500 kilometers) covering the entire western Atlantic Ocean. DFe measurements along this transect unveiled details about the supply and cycling of Fe. External sources of Fe identified included off-shelf and river supply, hydrothermal vents and aeolian dust. Nevertheless, vertical processes such as the recycling of Fe resulting from the remineralization of sinking organic matter and the removal of Fe by scavenging still dominated the distribution of DFe. In the northern West Atlantic Ocean, Fe recycling and lateral transport from the eastern tropical North Atlantic Oxygen Minimum Zone (OMZ) dominated the DFe-distribution. Finally, our measurements showed that the North Atlantic Deep Water (NADW), the major driver of the so-called ocean conveyor belt, contains excess DFe relative to phosphate after full biological utilization and is therefore an important source of Fe for biological production in the global ocean. PMID:24978190

Chemical pump study

NASA Technical Reports Server (NTRS)

Bergquist, L. E.

1973-01-01

Sorption pumps applicable to the Pioneer Venus Mass Spectrometer Experiment were investigated. The pump requirements are discussed, and a survey of the existing pumps presented. Zirconium and zirconium graphite products were found to be the most promising among the getter materials surveyed. A preliminary pump design for the noble gas experiment is discussed.

Non-riverine pathways of terrigenous carbon to the ocean

NASA Astrophysics Data System (ADS)

Dittmar, T.

2007-12-01

The extent and nature of non-riverine fluxes of carbon from land to ocean are poorly understood. Tidal pumping from highly productive coastal environments, atmospheric deposition and submarine groundwater discharge can be significant transport mechanisms for carbon to the ocean. Evidence is mounting that tidally-induced porewater fluxes ("outwelling") of dissolved organic matter (DOM) from mangroves and salt marshes alone may be similar in magnitude as the global riverine flux of DOM. Tidal pumping of dissolved inorganic carbon (DIC) might exceed organic carbon fluxes by far, but the existing knowledge on DIC outwelling is too scarce for a first global estimate. Results from two case studies on the biogeochemistry of DOM outwelling are presented, from the mangroves in Northern Brazil and the salt marshes in the Northern Gulf of Mexico. Ongoing research in the Northern Gulf of Mexico indicates that outwelling and groundwater inputs probably exceed riverine DOM fluxes in this region. Similar observations were made in Northern Brazil. There, the fate of mangrove-derived DOM could be traced from its source in the mangrove sediments to the outer North Brazil shelf by using a combination of isotopic and molecular approaches. Reversed-phase liquid chromatography / mass spectrometry (LC/MS) provided a multifaceted array of information that mirrors the molecular complexity of DOM. Statistical analyses on these data revealed significant differences between mangrove and open-ocean DOM which successively disappeared by irradiating the samples with natural sunlight. Nuclear magnetic resonance analyses yielded concurrent results. Ultrahigh-resolution Fourier transform-ion cyclotron resonance mass spectrometry (FT-ICR MS) is the only technique capable of resolving and identifying individual elemental compositions in these complex mixtures. We applied this technique for characterizing mangrove-derived DOM and to assess the molecular changes that occur in the initial stages of

The Ecology, Biogeochemistry, and Optical Properties of Coccolithophores

NASA Astrophysics Data System (ADS)

Balch, William M.

2018-01-01

Coccolithophores are major contributors to phytoplankton communities and ocean biogeochemistry and are strong modulators of the optical field in the sea. New discoveries are changing paradigms about these calcifiers. A new role for silicon in coccolithophore calcification is coupling carbonate and silicon cycles. Phosphorus and iron play key roles in regulating coccolithophore growth. Comparing molecular phylogenies with coccolith morphometrics is forcing the reconciliation of biological and geological observations. Mixotrophy may be a possible life strategy for deep-dwelling species, which has ramifications for biological pump and alkalinity pump paradigms. Climate, ocean temperatures, and pH appear to be affecting coccolithophores in unexpected ways. Global calcification is approximately 1-3% of primary productivity and affects CO2 budgets. New measurements of the backscattering cross section of coccolithophores have improved satellite-based algorithms and their application in case I and case II optical waters. Remote sensing has allowed the detection of basin-scale coccolithophore features in the Southern Ocean.

Diurnal changes in ocean color in coastal waters

NASA Astrophysics Data System (ADS)

Arnone, Robert; Vandermeulen, Ryan; Ladner, Sherwin; Ondrusek, Michael; Kovach, Charles; Yang, Haoping; Salisbury, Joseph

2016-05-01

Coastal processes can change on hourly time scales in response to tides, winds and biological activity, which can influence the color of surface waters. These temporal and spatial ocean color changes require satellite validation for applications using bio-optical products to delineate diurnal processes. The diurnal color change and capability for satellite ocean color response were determined with in situ and satellite observations. Hourly variations in satellite ocean color are dependent on several properties which include: a) sensor characterization b) advection of water masses and c) diurnal response of biological and optical water properties. The in situ diurnal changes in ocean color in a dynamic turbid coastal region in the northern Gulf of Mexico were characterized using above water spectral radiometry from an AErosol RObotic NETwork (AERONET -WavCIS CSI-06) site that provides up to 8-10 observations per day (in 15-30 minute increments). These in situ diurnal changes were used to validate and quantify natural bio-optical fluctuations in satellite ocean color measurements. Satellite capability to detect changes in ocean color was characterized by using overlapping afternoon orbits of the VIIRS-NPP ocean color sensor within 100 minutes. Results show the capability of multiple satellite observations to monitor hourly color changes in dynamic coastal regions that are impacted by tides, re-suspension, and river plume dispersion. Hourly changes in satellite ocean color were validated with in situ observation on multiple occurrences during different times of the afternoon. Also, the spatial variability of VIIRS diurnal changes shows the occurrence and displacement of phytoplankton blooms and decay during the afternoon period. Results suggest that determining the temporal and spatial changes in a color / phytoplankton bloom from the morning to afternoon time period will require additional satellite coverage periods in the coastal zone.

In situ observations of ocean productivity using the SeaCycler mooring in the central Labrador Sea

NASA Astrophysics Data System (ADS)

Atamanchuk, Dariia; Koelling, Jannes; Devred, Emmanuel; Siddall, Greg; Send, Uwe; Wallace, Douglas

2017-04-01

The Central Labrador Sea is a major deep-convection region in the NW Atlantic which is the most intense sink for anthropogenic carbon in the global ocean (de Vries et al, 2013). CO2 enters the ocean by air-sea exchange and is transported into the ocean's interior mainly though the biological pump (Longhurst et al., 1989). Despite its important role for CO2 uptake and high natural variability, the Labrador Sea is undersampled due to rough conditions and an overall lack of volunteer observing ship (VOS) transits. The SeaCycler moored profiler is currently providing year-round data from the central Labrador Sea and resolves daily changes of inorganic carbon and related properties from the upper 150m of the water column. SeaCycler's sensor float is equipped with 13 physical, chemical and biooptical sensors which measure temperature, salinity, dissolved gases, nutrients and optical properties of seawater. A combination of Pro-CV (Pro-Oceanus Inc, Canada) and CO2 optode (Aanderaa, Norway) sensors in profiling mode provides a detailed description of Dissolved Inorganic Carbon (DIC) dynamics in the upper 150m over the productive season. This allows, for the first time, high-resolution carbon-based estimates of ocean productivity from throughout the euphotic zone over an annual cycle which can be compared to estimates derived from simultaneous oxygen and nitrate (Deep SUNA, Satlantic LP, Canada) profiles. These in situ carbon, nitrogen and oxygen-based estimates of using in-situ data are further compared with remotely-sensed estimates from MODIS satellite data. The SeaCycler data allow estimation of the annual cycle of the air-sea CO2 flux and carbon export. Concurrently recorded in-situ bio-optical data allow direct comparison of optical measurements of biomass change and reveal key patterns in the seasonal succession of phytoplankton groups responsible for carbon drawdown.

33. PLAN OF DEER ISLAND PUMPING STATION SHOWING EXISTING PUMPING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

33. PLAN OF DEER ISLAND PUMPING STATION SHOWING EXISTING PUMPING PLAN AND LOCATION OF PROPOSED ADDITIONS, METROPOLITAN WATER AND SEWERAGE BOARD, METROPOLITAN SEWERAGE WORKS, JULY 1908. Aperture card 6417. - Deer Island Pumping Station, Boston, Suffolk County, MA

Axial Pump

NASA Technical Reports Server (NTRS)

Bozeman, Richard J., Jr. (Inventor); Akkerman, James W. (Inventor); Aber, Gregory S. (Inventor); VanDamm, George Arthur (Inventor); Bacak, James W. (Inventor); Svejkovsky, Paul A. (Inventor); Benkowski, Robert J. (Inventor)

1997-01-01

A rotary blood pump includes a pump housing for receiving a flow straightener, a rotor mounted on rotor bearings and having an inducer portion and an impeller portion, and a diffuser. The entrance angle, outlet angle, axial and radial clearances of blades associated with the flow straightener, inducer portion, impeller portion and diffuser are optimized to minimize hemolysis while maintaining pump efficiency. The rotor bearing includes a bearing chamber that is filled with cross-linked blood or other bio-compatible material. A back emf integrated circuit regulates rotor operation and a microcomputer may be used to control one or more back emf integrated circuits. A plurality of magnets are disposed in each of a plurality of impeller blades with a small air gap. A stator may be axially adjusted on the pump housing to absorb bearing load and maximize pump efficiency.

A metadata template for ocean acidification data

NASA Astrophysics Data System (ADS)

Jiang, L.

2014-12-01

Metadata is structured information that describes, explains, and locates an information resource (e.g., data). It is often coarsely described as data about data, and documents information such as what was measured, by whom, when, where, and how it was sampled, analyzed, with what instruments. Metadata is inherent to ensure the survivability and accessibility of the data into the future. With the rapid expansion of biological response ocean acidification (OA) studies, the lack of a common metadata template to document such type of data has become a significant gap for ocean acidification data management efforts. In this paper, we present a metadata template that can be applied to a broad spectrum of OA studies, including those studying the biological responses of organisms on ocean acidification. The "variable metadata section", which includes the variable name, observation type, whether the variable is a manipulation condition or response variable, and the biological subject on which the variable is studied, forms the core of this metadata template. Additional metadata elements, such as principal investigators, temporal and spatial coverage, platforms for the sampling, data citation are essential components to complete the template. We explain the structure of the template, and define many metadata elements that may be unfamiliar to researchers. For that reason, this paper can serve as a user's manual for the template.

Cross equator transport of 137Cs from North Pacific Ocean to South Pacific Ocean ( BEAGLE2003 cruises)

NASA Astrophysics Data System (ADS)

Aoyama, M.; Fukasawa, M.; Hirose, K.; Hamajima, Y.; Kawano, T.; Povinec, P. P.; Sanchez-Cabeza, J. A.

2011-04-01

The anthropogenic radionuclides such as 137Cs, 90Sr, 99Tc, 129I and some transuranics are important tracers of transport and biogeochemical processes in the ocean. 137Cs, with a half-life of 30 years, a major fission product present in a dissolved form in seawater, is a good tracer of oceanic circulation at a time scale of several decades. At WOCE P6 line along 30°S during the BEAGLE cruise in 2003, surface seawater (around 80 L) was collected a few meters below the ocean surface by a pumping system. Water column samples (from 5 to 20 L) were collected using a Rosette multisampling system and Niskin bottles. 137Cs was separated from seawater samples using ammonium phosphomolybdate (AMP) and analysed for 137Cs in low-level HPGe gamma-ray spectrometers. Results allowed to draw a detailed picture of the distribution of 137Cs in the South Pacific Ocean along P6 line. A 137Cs depth section was depicted from about 160 samples. 137Cs concentrations in the subsurface layers ranged from 0.07 ± 0.04 Bq m -3 to 1.85 ± 0.145 Bq m -3, high in the Tasman Sea and very low in the eastern region where upwelling occurs. Water column inventories of 137Cs from surface to 1000 dbar depth ranged from 270 ± 104 to 1048 ± 127 Bq m -2. It was concluded that the source of higher 137Cs concentration and inventories in the Tasman Sea was 137Cs deposited in the mid latitude of the North Pacific Ocean and transported across the equator during four decades.

Physical and Biological Drivers of Biogeochemical Tracers Within the Seasonal Sea Ice Zone of the Southern Ocean From Profiling Floats

NASA Astrophysics Data System (ADS)

Briggs, Ellen M.; Martz, Todd R.; Talley, Lynne D.; Mazloff, Matthew R.; Johnson, Kenneth S.

2018-02-01

Here we present initial findings from nine profiling floats equipped with pH, O2, NO3-, and other biogeochemical sensors that were deployed in the seasonal ice zone (SIZ) of the Southern Ocean in 2014 and 2015 through the Southern Ocean Carbon and Climate Observations and Modelling (SOCCOM) project. A large springtime phytoplankton bloom was observed that coincided with sea ice melt for all nine floats. We argue this bloom results from a shoaling of the mixed layer depth, increased vertical stability, and enhanced nutrient and light availability as the sea ice melts. This interpretation is supported by the absence of a springtime bloom when one of the floats left the SIZ in the second year of observations. During the sea ice covered period, net heterotrophic conditions were observed. The rate of uptake of O2 and release of dissolved inorganic carbon (derived from pH and estimated total alkalinity) and NO3- is reminiscent of biological respiration and is nearly Redfieldian for the nine floats. A simple model of mixed layer physics was developed to separate the physical and biological components of the signal in pH and O2 over one annual cycle for a float in the Ross Sea SIZ. The resulting annual net community production suggests that seasonal respiration during the ice covered period of the year nearly balances the production in the euphotic layer of up to 5 mol C m-2 during the ice free period leading to a net of near zero carbon exported to depth for this one float.

Gas pump with movable gas pumping panels

DOEpatents

Osher, John E.

1984-01-01

Apparatus for pumping gas continuously a plurality of articulated panels of getter material, each of which absorbs gases on one side while another of its sides is simultaneously reactivated in a zone isolated by the panels themselves from a working space being pumped.

Gas pump with movable gas pumping panels

DOEpatents

Osher, J.L.

Apparatus for pumping gas continuously a plurality of articulated panels of getter material, each of which absorbs gases on one side while another of its sides is simultaneously reactivated in a zone isolated by the panels themselves from a working space being pumped.

The acceleration of dissolved cobalt's ecological stoichiometry due to biological uptake, remineralization, and scavenging in the Atlantic Ocean

NASA Astrophysics Data System (ADS)

Saito, Mak A.; Noble, Abigail E.; Hawco, Nicholas; Twining, Benjamin S.; Ohnemus, Daniel C.; John, Seth G.; Lam, Phoebe; Conway, Tim M.; Johnson, Rod; Moran, Dawn; McIlvin, Matthew

2017-10-01

The stoichiometry of biological components and their influence on dissolved distributions have long been of interest in the study of the oceans. Cobalt has the smallest oceanic inventory of inorganic micronutrients and hence is particularly vulnerable to influence by internal oceanic processes including euphotic zone uptake, remineralization, and scavenging. Here we observe not only large variations in dCo : P stoichiometry but also the acceleration of those dCo : P ratios in the upper water column in response to several environmental processes. The ecological stoichiometry of total dissolved cobalt (dCo) was examined using data from a US North Atlantic GEOTRACES transect and from a zonal South Atlantic GEOTRACES-compliant transect (GA03/3e and GAc01) by Redfieldian analysis of its statistical relationships with the macronutrient phosphate. Trends in the dissolved cobalt to phosphate (dCo : P) stoichiometric relationships were evident in the basin-scale vertical structure of cobalt, with positive dCo : P slopes in the euphotic zone and negative slopes found in the ocean interior and in coastal environments. The euphotic positive slopes were often found to accelerate towards the surface and this was interpreted as being due to the combined influence of depleted phosphate, phosphorus-sparing (conserving) mechanisms, increased alkaline phosphatase metalloenzyme production (a zinc or perhaps cobalt enzyme), and biochemical substitution of Co for depleted Zn. Consistent with this, dissolved Zn (dZn) was found to be drawn down to only 2-fold more than dCo, despite being more than 18-fold more abundant in the ocean interior. Particulate cobalt concentrations increased in abundance from the base of the euphotic zone to become ˜ 10 % of the overall cobalt inventory in the upper euphotic zone with high stoichiometric values of ˜ 400 µmol Co mol-1 P. Metaproteomic results from the Bermuda Atlantic Time-series Study (BATS) station found cyanobacterial isoforms of the

Characterization of an induced pressure pumping force for microfluidics

NASA Astrophysics Data System (ADS)

Jiang, Hai; Fan, Na; Peng, Bei; Weng, Xuan

2017-05-01

The electro-osmotic pumping and pressure-driven manipulation of fluids are considered as the most common strategies in microfluidic devices. However, both of them exhibit major disadvantages such as hard integration and high reagent consumption, and they are destructive methods for detection and photo bleaching. In this paper, an electric field-effect flow control approach, combining the electro-osmotic pumping force and the pressure-driven pumping force, was developed to generate the induced pressure-driven flow in a T-shaped microfluidic chip. Electro-osmotic flow between the T-intersection and two reservoirs was demonstrated, and it provided a stable, continuous, and electric field-free flow in the section of the microchannel without the electrodes. The velocity of the induced pressure-driven flow was linearly proportional to the applied voltages. Both numerical and experimental investigations were conducted to prove the concept, and the experimental results showed good agreement with the numerical simulations. In comparison to other induced pressure pumping methods, this approach can induce a high and controllable pressure drop in the electric field-free segment, subsequently causing an induced pressure-driven flow for transporting particles or biological cells. In addition, the generation of bubbles and the blocking of the microchannel are avoided.

Outcome of Cardiac Rehabilitation Following Off-Pump Versus On-Pump Coronary Bypass Surgery

PubMed Central

Arefizadeh, Reza; Hariri, Seyed Yaser; Moghadam, Adel Johari

2017-01-01

BACKGROUND: A few studies have compared the cardiac rehabilitation (CR) outcome between those who undergo conventional on-pump bypass surgery and off-pump surgery. We compared this outcome among the patients differentiated by the On-pump and off-pump surgical procedures about cardiovascular variables and psychological status. METHODS: This longitudinal study recruited 318 and 102 consecutive patients who had undergone CABG (on-pump surgery, n = 318 and off-pump surgery, n = 102) and been referred to the CR clinic. RESULTS: The off-pump surgery patients had more improvement in their metabolic equivalents (METs) value. The physical and mental components of health-related quality of life (QOL) (based on SF-36 questionnaire) as well as depression-anxiety (based on Costello-Comrey Depression and Anxiety Scale) were notably improved in the two study groups after the CR program, while changes in the QOL components scores and also depression-anxiety score were not different between the off-pump and on-pump techniques. CONCLUSIONS: Regarding QOL and psychological status, there were no differences in the CR outcome between those who underwent off-pump bypass surgery and those who underwent on-pump surgery; nevertheless, the off-pump technique was superior to the on-pump method on METs improvement following CR. PMID:28698744

Outcome of Cardiac Rehabilitation Following Off-Pump Versus On-Pump Coronary Bypass Surgery.

PubMed

Arefizadeh, Reza; Hariri, Seyed Yaser; Moghadam, Adel Johari

2017-06-15

A few studies have compared the cardiac rehabilitation (CR) outcome between those who undergo conventional on-pump bypass surgery and off-pump surgery. We compared this outcome among the patients differentiated by the On-pump and off-pump surgical procedures about cardiovascular variables and psychological status. This longitudinal study recruited 318 and 102 consecutive patients who had undergone CABG (on-pump surgery, n = 318 and off-pump surgery, n = 102) and been referred to the CR clinic. The off-pump surgery patients had more improvement in their metabolic equivalents (METs) value. The physical and mental components of health-related quality of life (QOL) (based on SF-36 questionnaire) as well as depression-anxiety (based on Costello-Comrey Depression and Anxiety Scale) were notably improved in the two study groups after the CR program, while changes in the QOL components scores and also depression-anxiety score were not different between the off-pump and on-pump techniques. Regarding QOL and psychological status, there were no differences in the CR outcome between those who underwent off-pump bypass surgery and those who underwent on-pump surgery; nevertheless, the off-pump technique was superior to the on-pump method on METs improvement following CR.

Calibration procedures and first dataset of Southern Ocean chlorophyll a profiles collected by elephant seals equipped with a newly developed CTD-fluorescence tags

NASA Astrophysics Data System (ADS)

Guinet, C.; Xing, X.; Walker, E.; Monestiez, P.; Marchand, S.; Picard, B.; Jaud, T.; Authier, M.; Cotté, C.; Dragon, A. C.; Diamond, E.; Antoine, D.; Lovell, P.; Blain, S.; D'Ortenzio, F.; Claustre, H.

2013-02-01

In situ observation of the marine environment has traditionally relied on ship-based platforms. The obvious consequence is that physical and biogeochemical properties have been dramatically undersampled, especially in the remote Southern Ocean (SO). The difficulty in obtaining in situ data represents the major limitations to our understanding, and interpretation of the coupling between physical forcing and the biogeochemical response. Southern elephant seals (Mirounga leonina) equipped with a new generation of oceanographic sensors can measure ocean structure in regions and seasons rarely observed with traditional oceanographic platforms. Over the last few years, seals have allowed for a considerable increase in temperature and salinity profiles from the SO, but we were still lacking information on the spatiotemporal variation of phytoplankton concentration. This information is critical to assess how the biological productivity of the SO, with direct consequences on the amount of CO2 "fixed'' by the biological pump, will respond to global warming. In this research programme, we use an innovative sampling fluorescence approach to quantify phytoplankton concentration at sea. For the first time, a low energy consumption fluorometer was added to Argos CTD-SRDL tags, and these novel instruments were deployed on 27 southern elephant seals between 25 December 2007 and the 4 February 2011. As many as 3388 fluorescence profiles associated with temperature and salinity measurements were thereby collected from a vast sector of the Southern Indian Ocean. This paper addresses the calibration issue of the fluorometer before being deployed on elephant seals and presents the first results obtained for the Indian sector of the Southern Ocean. This in situ system is implemented in synergy with satellite ocean colour radiometry. Satellite-derived data is limited to the surface layer and is restricted over the SO by extensive cloud cover. However, with the addition of these new tags

39. THREECYLINDER HYDRAULIC OIL PUMP (MANUFACTURED BY WORTHINGTON: PUMP AND ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

39. THREE-CYLINDER HYDRAULIC OIL PUMP (MANUFACTURED BY WORTHINGTON: PUMP AND MACHINERY COMPANY, HOLYOKE MASSACHUSETTS) IN MACHINERY CHAMBER FOR SLUICE GATE WORKS ON GALLERY 1. NOTE OIL TANK ABOVE PUMP MOTOR. VIEW TO NORTHWEST. - Owyhee Dam, Across Owyhee River, Nyssa, Malheur County, OR

Overview of Pump Room, showing pumps at right and power ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Overview of Pump Room, showing pumps at right and power distribution cabinets for valve motors along north wall at left. View to east - Wellton-Mohawk Irrigation System, Pumping Plant No. 1, Bounded by Gila River & Union Pacific Railroad, Wellton, Yuma County, AZ

DISK PUMP FEASIBILITY INVESTIGATION,

DTIC Science & Technology

system as an inducer and/or mainstage pump for liquid rocket applications. This investigation consisted of the analysis, design, and test of a disk...pumping action is a function of the viscous properties of the pumped fluid. (2) The pump does not require the conventional pump lifting forces. ( 3 ...with no apparent head deterioration. The representative maximum suction specific speed at a 3 % head drop was never reached. The pump demonstrated

Biological mechanisms supporting adaptation to ocean acidification in coastal ecosystems

NASA Astrophysics Data System (ADS)

Hendriks, Iris E.; Duarte, Carlos M.; Olsen, Ylva S.; Steckbauer, Alexandra; Ramajo, Laura; Moore, Tommy S.; Trotter, Julie A.; McCulloch, Malcolm

2015-01-01

The direct influence of anthropogenic CO2 might play a limited role in pH regulation in coastal ecosystems as pH regulation in these areas can be complex. They experience large variability across a broad range of spatial and temporal scales, with complex external and internal drivers. Organisms influence pH at a patch scale, where community metabolic effects and hydrodynamic processes interact to produce broad ranges in pH, (˜0.3-0.5 pH units) over daily cycles and spatial scales (mm to m) particularly in shallow vegetated habitats and coral reefs where both respiration and photosynthetic activity are intense. Biological interactions at the ecosystem scale, linked to patchiness in habitat landscapes and seasonal changes in metabolic processes and temperature lead to changes of about 0.3-0.5 pH units throughout a year. Furthermore, on the scale of individual organisms, small-scale processes including changes at the Diffusive Boundary Layer (DBL), interactions with symbionts, and changes to the specific calcification environment, induce additional changes in excess of 0.5 pH units. In these highly variable pH environments calcifying organisms have developed the capacity to alter the pH of their calcifying environment, or specifically within critical tissues where calcification occurs, thus achieving a homeostasis. This capacity to control the conditions for calcification at the organism scale may therefore buffer the full impacts of ocean acidification on an organism scale, although this might be at a cost to the individual. Furthermore, in some areas, calcifiers may potentially benefit from changes to ambient seawater pH, where photosynthetic organisms drawdown CO2.

Decline in global oceanic oxygen content during the past five decades.

PubMed

Schmidtko, Sunke; Stramma, Lothar; Visbeck, Martin

2017-02-15

Ocean models predict a decline in the dissolved oxygen inventory of the global ocean of one to seven per cent by the year 2100, caused by a combination of a warming-induced decline in oxygen solubility and reduced ventilation of the deep ocean. It is thought that such a decline in the oceanic oxygen content could affect ocean nutrient cycles and the marine habitat, with potentially detrimental consequences for fisheries and coastal economies. Regional observational data indicate a continuous decrease in oceanic dissolved oxygen concentrations in most regions of the global ocean, with an increase reported in a few limited areas, varying by study. Prior work attempting to resolve variations in dissolved oxygen concentrations at the global scale reported a global oxygen loss of 550 ± 130 teramoles (10 12  mol) per decade between 100 and 1,000 metres depth based on a comparison of data from the 1970s and 1990s. Here we provide a quantitative assessment of the entire ocean oxygen inventory by analysing dissolved oxygen and supporting data for the complete oceanic water column over the past 50 years. We find that the global oceanic oxygen content of 227.4 ± 1.1 petamoles (10 15  mol) has decreased by more than two per cent (4.8 ± 2.1 petamoles) since 1960, with large variations in oxygen loss in different ocean basins and at different depths. We suggest that changes in the upper water column are mostly due to a warming-induced decrease in solubility and biological consumption. Changes in the deeper ocean may have their origin in basin-scale multi-decadal variability, oceanic overturning slow-down and a potential increase in biological consumption.

Biological responses of the marine diatom Chaetoceros socialis to changing environmental conditions: A laboratory experiment

PubMed Central

Roevros, Nathalie; Dehairs, Frank; Chou, Lei

2017-01-01

Diatoms constitute a major group of phytoplankton, accounting for ~20% of the world’s primary production. It has been shown that iron (Fe) can be the limiting factor for phytoplankton growth, in particular, in the HNLC (High Nutrient Low Chlorophyll) regions. Iron plays thus an essential role in governing the marine primary productivity and the efficiency of biological carbon pump. Oceanic systems are undergoing continuous modifications at varying rates and magnitudes as a result of changing climate. The objective of our research is to evaluate how changing environmental conditions (dust deposition, ocean warming and acidification) can affect marine Fe biogeochemistry and diatom growth. Laboratory culture experiments using a marine diatom Chaetoceros socialis were conducted at two temperatures (13°C and 18°C) and under two pCO2 (carbon dioxide partial pressure) (400 μatm and 800 μatm) conditions. The present study clearly highlights the effect of ocean acidification on enhancing the release of Fe upon dust deposition. Our results also confirm that being a potential source of Fe, dust provides in addition a readily utilizable source of macronutrients such as dissolved phosphate (PO4) and silicate (DSi). However, elevated atmospheric CO2 concentrations may also have an adverse impact on diatom growth, causing a decrease in cell size and possible further changes in phytoplankton composition. Meanwhile, ocean warming may lead to the reduction of diatom production and cell size, inducing poleward shifts in the biogeographic distribution of diatoms. The changing climate has thus a significant implication for ocean phytoplankton growth, cell size and primary productivity, phytoplankton distribution and community composition, and carbon (C), nitrogen (N), phosphorus (P), silicon (Si) and Fe biogeochemical cycles in various ways. PMID:29190826

Increased exposure of Southern Ocean phytoplankton to ultraviolet radiation

NASA Astrophysics Data System (ADS)

Lubin, Dan; Arrigo, Kevin R.; van Dijken, Gert L.

2004-05-01

Satellite remote sensing of both surface solar ultraviolet radiation (UVR) and chlorophyll over two decades shows that biologically significant ultraviolet radiation increases began to occur over the Southern Ocean three years before the ozone ``hole'' was discovered. Beginning in October 1983, the most frequent occurrences of enhanced UVR over phytoplankton-rich waters occurred in the Weddell Sea and Indian Ocean sectors of the Southern Ocean, impacting 60% of the surface biomass by the late 1990s. These results suggest two reasons why more serious impacts to the base of the marine food web may not have been detected by field experiments: (1) the onset of UVR increases several years before dedicated field work began may have impacted the most sensitive organisms long before such damage could be detected, and (2) most biological field work has so far not taken place in Antarctic waters most extensively subjected to enhanced UVR.

Ubiquitous healthy diatoms in the deep sea confirms deep carbon injection by the biological pump

NASA Astrophysics Data System (ADS)

Agustí, Susana; González-Gordillo, Jose I.; Vaqué, Dolors; Estrada, Marta; Cerezo, Maria I.; Salazar, Guillem; Gasol, Josep M.; Duarte, Carlos M.

2016-04-01

The role of the ocean as a sink for CO2 is partially dependent on the downward transport of phytoplankton cells packaged within fast-sinking particles. However, whether such fast-sinking mechanisms deliver fresh organic carbon down to the deep bathypelagic sea and whether this mechanism is prevalent across the ocean awaits confirmation. Photosynthetic plankton, directly responsible for trapping CO2 in organic form in the surface layer, are a key constituent of the flux of sinking particles and are assumed to die and become detritus upon leaving the photic layer. Research in the 1960-70's reported the occasional presence of well-preserved phytoplankton cells in the deep ocean, but these observations, which could signal at rapid sinking rates, were considered anecdotal. Using new developments we tested the presence of healthy phytoplankton cells in the deep sea (2000 to 4000 m depth) along the Malaspina 2010 Circumnavigation Expedition, a global expedition sampling the bathypelagic zone of the Atlantic, Indian and Pacific Oceans. In particular, we used a new microplankton sampling device, the Bottle-Net, 16S rDNA sequences, flow cytometric counts, vital stains and experiments to explore the abundance and health status of photosynthetic plankton cells between 2,000 and 4,000 m depth along the Circumnavigation track. We described the community of microplankton (> 20μm) found at the deep ocean (2000-4000 m depth), surprisingly dominated by phytoplankton, and within this, by diatoms. Moreover, we report the ubiquitous presence of healthy photosynthetic cells, dominated by diatoms, down to 4,000 m in the deep dark sea. Decay experiments with surface phytoplankton suggested that the large proportion (18%) of healthy photosynthetic cells observed, on average, in the dark ocean, requires transport times from few days to few weeks, corresponding to sinking rates of 124 to 732 m d-1, comparable to those of fast sinking aggregates and faecal pellets. These results confirm the

Champagne Heat Pump

NASA Technical Reports Server (NTRS)

Jones, Jack A.

2004-01-01

The term champagne heat pump denotes a developmental heat pump that exploits a cycle of absorption and desorption of carbon dioxide in an alcohol or other organic liquid. Whereas most heat pumps in common use in the United States are energized by mechanical compression, the champagne heat pump is energized by heating. The concept of heat pumps based on other absorption cycles energized by heat has been understood for years, but some of these heat pumps are outlawed in many areas because of the potential hazards posed by leakage of working fluids. For example, in the case of the water/ammonia cycle, there are potential hazards of toxicity and flammability. The organic-liquid/carbon dioxide absorption/desorption cycle of the champagne heat pump is similar to the water/ammonia cycle, but carbon dioxide is nontoxic and environmentally benign, and one can choose an alcohol or other organic liquid that is also relatively nontoxic and environmentally benign. Two candidate nonalcohol organic liquids are isobutyl acetate and amyl acetate. Although alcohols and many other organic liquids are flammable, they present little or no flammability hazard in the champagne heat pump because only the nonflammable carbon dioxide component of the refrigerant mixture is circulated to the evaporator and condenser heat exchangers, which are the only components of the heat pump in direct contact with air in habitable spaces.