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Sample records for organic solid matter

  1. Electron Shuttling Capacity of Solid-Phase Organic Matter in Forest Soils

    NASA Astrophysics Data System (ADS)

    Patel, A.; Zhao, Q.; Yang, Y.

    2015-12-01

    Soil organic matter, as an electron shuttle, plays an important role in regulating the biogeochemical cycles of metals, especially the redox reactions for iron. Microorganisms can reduce soil organic matter under anaerobic conditions, and biotically-reduced soil organic matter can abiotically donate electrons to ferric oxides. Such soil organic matter-mediated electron transport can facilitate the interactions between microorganisms and insoluble terminal electron acceptors, i.e. iron minerals. Most previous studies have been focused on the electron shuttling processes through dissolved soil organic matter, and scant information is available for solid-phase soil organic matter. In this study, we aim to quantify the electron accepting capacity for solid-phase organic matter in soils collected from four different forests in the United States, including Truckee (CA), Little Valley (NV), Howland (ME) and Hart (MI). We used Shewanella oneidensisMR-1 to biotically reduce soil slurries, and then quantified the electrons transferred to solid-phase and solution-phase organic matter by reacting them with Fe(III)-nitrilotriacetic acid (Fe(III)-NTA). The generation of Fe(II) was measured by a ferrozine assay to calculate the electron accepting capacity of soil organic matter. Our preliminary results showed that the Truckee soil organic matter can accept 0.51±0.07 mM e-/mol carbon. We will measure the electron accepting capacity for four different soils and correlate them to the physicochemical properties of soils. Potential results will provide information about the electron accepting capacity of solid-phase soil organic matter and its governing factors, with broad implication on the coupled biogeochemical cycles of carbon and iron.

  2. Chemical compositions of dissolved organic matter from various sources as characterized by solid-state NMR

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dissolved organic matter (DOM) in surface waters plays an important role in biogeochemical and ecological processes. This study used solid-state NMR techniques to explore the molecular signatures of riverine DOM in relation to its point and nonpoint sources. DOM samples were isolated from (1) two st...

  3. Municipal solid waste incineration bottom ash: Characterization and kinetic studies of organic matter

    SciTech Connect

    Dugenest, S.; Casabianca, H.; Grenier-Loustalot, M.F.; Combrisson, J.

    1999-04-01

    Bottom ash is the main solid residue which is produced by municipal solid waste incineration (MSWI) facilities. To be reused in public works, it has to be stored previously a few months. This material is composed primarily of a mineral matrix but also contains unburnt organic matter. The mineral content and its change in the course of aging are relatively well-known, in contrast with the organic content. So in order to detect the phenomena responsible for changes in organic matter and their effects during aging, the concentrations of the main organic compounds previously characterized, the number of microorganisms, and the release of carbon dioxide were followed kinetically in model laboratory conditions. The results showed that the aging process led to the natural biodegradation of the organic matter available in bottom ash, composed essentially of carboxylic acids and n-alkanes (steroids and PAH`s to a lesser extent), and consequently that it would improve the bottom ash quality. Furthermore these results were confirmed by the study of aging conducted in conditions used in the industrial scale.

  4. Cu Binding to Iron Oxide-Organic Matter Coprecipitates in Solid and Dissolved Phases

    NASA Astrophysics Data System (ADS)

    Vadas, T. M.; Koenigsmark, F.

    2015-12-01

    Recent studies indicate that Cu is released from wetlands following storm events. Assymetrical field flow field fractionation (AF4) analyses as well as total and dissolved metal concentration measurements suggest iron oxide-organic matter complexes control Cu retention and release. Coprecipitation products of Fe oxide and organic matter were prepared under conditions similar to the wetland to assess Cu partitioning to and availability from solid phases that settle from solution as well as phases remaining suspended. Cu coprecipitation and sorption to organomineral precipitation solids formed at different Fe:organic carbon (OC) ratios were compared for net Cu removal and extractability. As more humic acid was present during precipitation of Fe, TEM images indicated smaller Fe oxide particles formed within an organic matrix as expected. In coprecipitation reactions, as the ratio of Fe:OC decreased, more Cu was removed from solution at pH 5.5 and below. However, in sorption reactions, there was an inhibition of Cu removal at low OC concentrations. As the pH increased from 5.5 to 7 and as solution phase OC concentration increased, more Cu remained dissolved in both coprecipitation and sorption reactions. The addition of Ca2+, glycine, histidine and citric acid or lowering the pH resulted in more extractable Cu from the coprecipitation compared with the sorption reactions. The variations in Cu extraction were likely due to a combination of a more amorphous structure in CPT products, and the relative abundance of available Fe oxide or OC binding sites. Suspended Fe oxide-organic matter coprecipitates were assessed using AF4 coupled to online TOC analysis and ICP-MS. In laboratory prepared samples, Cu was observed in a mixture of small 1-5 nm colloids of Fe oxide-organic matter precipitates, but the majority was observed in larger organic matter colloids and were not UV absorbing, suggesting more aliphatic carbon materials. In field samples, up to 60% of the dissolved Cu

  5. ENVIRONMENTAL RESEARCH BRIEF: CHARACTERIZATION OF ORGANIC MATTER IN SOIL AND AQUIFER SOLIDS

    EPA Science Inventory

    The focus of this work was the evaluation of analytical methods to determine and characterize fractions of subsurface organic matter. Major fractions of total organic carbon (TOC) include: particulate organic carbon (POC) in aquifer material, dissolved organic carbon (DOC) and ...

  6. Fresh organic matter of municipal solid waste enhances phytoextraction of heavy metals from contaminated soil.

    PubMed

    Salati, S; Quadri, G; Tambone, F; Adani, F

    2010-05-01

    In this study, the ability of the organic fraction of municipal solid wastes (OFMSW) to enhance heavy metal uptake of maize shoots compared with ethylenediamine disuccinic acid (EDDS) was tested on soil contaminated with heavy metals. Soils treated with OFMSW and EDDS significantly increased the concentration of heavy metals in maize shoots (increments of 302%, 66%, 184%, 169%, and 23% for Cr, Cu, Ni, Zn, and Pb with respect to the control and increments of 933%, 482%, 928%, 428%, and 5551% for soils treated with OFMSW and EDDS, respectively). In soil treated with OFMSW, metal uptake was favored because of the high presence of dissolved organic matter (DOM) (41.6x than soil control) that exhibited ligand properties because of the high presence of carboxylic acids. Because of the toxic effect of EDDS on maize plants, soil treated with OFMSW achieved the highest extraction of total heavy metals. PMID:19932537

  7. The use of solid-phase fluorescence spectroscopy in the characterisation of organic matter transformations.

    PubMed

    Albrecht, R; Verrecchia, E; Pfeifer, H-R

    2015-03-01

    Given its high sensitivity and non-destructive nature, fluorescence excitation-emission matrix (EEM) spectroscopy is widely used to differentiate changes and transformations of dissolved or water-extracted organic matter (OM) in natural environments. The same technique applied directly on solid samples (solid-phase fluorescence spectroscopy, SPF-EEM) provides accurate results when used with pharmaceutical products or food samples, but only a few studies have considered natural OM. This study reports on the use of SPF-EEM on solid compost samples and emphasises the way the different maturation phases can be distinguished with fluorophores closely resembling those found in dissolved samples. A very good correlation has been found with data from Rock-Eval pyrolysis, nuclear magnetic resonance ((13)C CPMAS NMR), and humic-fulvic acid ratios determined by conventional NaOH-extraction. SPF-EEM appears as a much simpler method than the conventional ones to detect transformations in natural OM samples with low mineral contents. However, direct application to soil samples requires some additional studies. PMID:25618693

  8. Heat impact caused molecular level changes in solid and dissolved soil organic matter

    NASA Astrophysics Data System (ADS)

    Hofmann, Diana; Steffen, Bernhard; Eckhardt, Kai-Uwe; Leinweber, Peter

    2015-04-01

    The ubiquitous abundance of pyrolysed, highly aromatic organic matter, called "Black Carbon" (BC), in all environmental compartments became increasingly important in different fields of research beyond intensive investigated atmospheric aerosol due to climatic relevance. Its predominant high resistance to abiotic and biotic degradation resulted in turnover times from less than a century to several millennia. This recalcitrance led to the enrichment of BC in soils, accounting for 1-6% (European forest soils) to 60% (Chernozems) of total soil organic matter (SOM). Hence, soil BC acts an important sink in the global carbon cycle. In contrast, consequences for the nitrogen cycle up to date are rather inconsistently discussed. Soil related dissolved organic matter (DOM) is a major controlling factor in soil formation, an important pathway of organic matter transport and one of the largest active carbon reservoirs on earth, if considering oceans and other bodies of water. The aim of this study was to evaluate the effects of artificially simulated wildfire by thermal treatment on the molecular composition of water extractable soil organic matter (DOM). Soils from two outdoor lysimeters with different management history were investigated. Soil samples, non-heated and heated up to 350°C were analyzed for elemental composition (carbon, nitrogen and sulfur) and for bulk molecular composition by Pyrolysis-Field Ionization Mass Spectrometry (Py-FIMS) and synchrotron-based X-ray Absorption Near-Edge Spectroscopy (XANES) at the C- and N K-edges. DOM-samples obtained by hot water extraction, desalting and concentration by solid phase extraction were subsequently analyzed by flow injection analysis in a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer (FTICR-MS), equipped with an ESI source and a 7 T supra-conducting magnet (LTQ-FT Ultra, ThermoFisher Scientific). This technique is the key technique for the analysis of complex samples due to its outstanding mass

  9. Competition Between Organic Matter and Solid Surface for Cation Sorption: Ce and Rare Earth Element as Proxy

    NASA Astrophysics Data System (ADS)

    Davranche, M.; Pourret, O.; Gruau, G.; Dia, A.

    2006-12-01

    Aquatic or soil organic matter are well-known to be strong adsorbent of many cations due to their adsorption capacity. Among these cations, the trivalent rare earth element (REE) and particularly Ce seem to be promising tools to investigate the impact of competition in between organic or inorganic ligands. Ce (III) is oxidized into Ce (IV) by oxidative surface such as Fe and Mn oxyhydroxides. Since Ce (IV) is preferentially adsorbed (as compared to other REE), a positive and negative Ce anomaly is developed respectively onto the solid and within the solution. Previous studies (Davranche et al., 2004, 2005) highlighted the suppression of this feature when Ce occurs to be complexed with organic matter (as humate species). Recent experiments were designed to evaluate the competition between humate and Mn oxide for REE complexation (each reactant being added simultaneously). Two parameters control the competition: time and pH. While organic matter does adsorb immediately the free REE, a desorption of REE occurs through time. Desorption is marked by the development of a Ce anomaly in the REE pattern that reflects the complexation with Mn oxide surface. Along the time, solid surface becomes thus more competitive than the organic matter. PH still influences the competition since at basic pH, REE and organic matter - probably as REE-organic complexes - are adsorbed onto the solid surface. Ultrafiltration analyses at 5 KD were also performed to separate organic matter and organic complexes from the solution. Results provide evidence that in presence of a solid surface, HREE (high rare earth element) desorption from the organic matter occurs through time. This leads to HREE enrichment in solution. All these results suggest that complexation of organic matter is kinetically favoured as compared to the complexation with solid surfaces. However, the organic complex formed during the first stage of the complexation process involves weak bindings. These bindings are easily broken

  10. Anaerobic co-digestion of solid waste: Effect of increasing organic loading rates and characterization of the solubilised organic matter.

    PubMed

    Ganesh, Rangaraj; Torrijos, Michel; Sousbie, Philippe; Steyer, Jean Philippe; Lugardon, Aurelien; Delgenes, Jean Philippe

    2013-02-01

    The impact of stepwise increase in OLR (up to 7.5kgVS/m(3)d) on methane production, reactor performance and solubilised organic matter production in a high-loading reactor were investigated. A reference reactor operated at low OLR (<2.0kgVS/m(3)d) was used solely to observe the methane potential of the feed substrate. Specific methane yield was 0.33lCH(4)/gVS at the lowest OLR and dropped by about 20% at the maximum OLR, while volumetric methane production increased from 0.35 to 1.38m(3)CH(4)/m(3)d. At higher loadings, solids hydrolysis was affected, with consequent transfer of poorly-degraded organic material into the drain solids. Biodegradability and size-fractionation of the solubilised COD were characterized to evaluate the possibility of a second stage liquid reactor. Only 18% of the organics were truly soluble (<1kD). The rest were in colloidal and very fine particulate form which originated from grass and cow manure and were non-biodegradable. PMID:23334011

  11. Dissolved organic matter: Fractional composition and sorbability by the soil solid phase (Review of literature)

    NASA Astrophysics Data System (ADS)

    Karavanova, E. I.

    2013-08-01

    The behavior of dissolved organic matter (DOM) in soils under varying environmental conditions represents a poorly studied aspect of the problem of organic matter loss from soils. The equilibrium and sustainable development of ecosystems in the northern latitudes are largely determined by the balance between the formation of DOM, its accumulation in the lower soil horizons, and its input with runoff into surface waters. The residence time, retention strength in the soil, and thermodynamic and biochemical stabilities depend on the localization of DOM in the pore space and its chemical structure. Amphiphilic properties represent a valuable diagnostic parameter, which can be used to predict the behavior of DOM in the soil. Acidic components of hydrophobic and hydrophilic nature constitute the major portion of DOM in forest soils of the temperate zone. The hydrophilic fraction includes short-chain aliphatic carboxylic acids, hydrocarbons, and amino acids and is poorly sorbed by the solid phase. However, the existence of this fraction in soil solution is also limited both in space (in the finest pores) and time because of higher accessibility to microbial degradation. The hydrophilic fraction composes the major portion of labile DOM in soils. The hydrophobic fraction consists of soluble degradation products of lignin; it is enriched in structural ortho-hydroxybenzene fragments, which ensure its selective sorption and strong retention in soils. Sorption is favored by low pH values (3.5-5), the high ionic strength of solution, the heavy texture and fine porous structure of soil, the high contents of oxalate- and dithionite-soluble iron (and aluminum) compounds, and hydrological conditions characterized by slow water movement. The adsorbed DOM is chemically and biochemically recalcitrant and significantly contributes to the humus reserves in the low mineral horizons of soils.

  12. Effect of organic matter and moisture on the calorific value of solid wastes: an update of the Tanner diagram.

    PubMed

    Komilis, Dimitrios; Kissas, Konstantinos; Symeonidis, Avraam

    2014-02-01

    Objective of the work was to experimentally determine the effect of the organic matter and moisture contents on the calorific value of organic solid wastes. Nine substrates (i.e. newsprint, biodried municipal solid wastes, municipal solid waste derived composts, wastewater sludges, and sea weed derived compost), with organic matter contents that ranged from 12% to 91% (dry weight) were used in the experiments. All substrates were dried and ground and deionized water was artificially added in order to achieve certain target moisture contents per substrate. The higher heating value (HHV) was, then, determined experimentally for each sample using a bomb calorimeter. Best reduced models were developed to describe the higher and lower heating values as a function of organic matter, ash and moisture contents. A triangular plot was constructed and the self-combustion area was determined and compared to that of the Tanner diagram. Response surfaces were drawn to visually assess the effect of organic matter and moisture contents on the calorific value of the wastes. PMID:24135625

  13. Chemical and biological characterization of organic matter during composting of municipal solid waste

    SciTech Connect

    Chefetz, B.; Yona Chen; Hadar, Y.; Hatcher, P.G.

    1996-07-01

    Composting of municipal solid waste (MSW) was studied in an attempt to elaborate transformations of organic matter (OM) during the process and define parameters for the degree of maturity of the product. Composting was performed in 1-m{sup 3} plastic boxes and the following parameters were measured in 13 samples during 132 d of composting: temperature, C/N ratio, ash content, humic substance contents, and fractions (humic acid, fulvic acid, and nonbumic fraction-HA, FA and NHF, respectively). Spectroscopic methods (CPMAS {sup 13}C-NMR, DRIFT) were used to study the chemical composition of the OM. A bioassay based on growth of cucumber (Cucumis satifus L. cv. Dlila) plants was correlated to other parameters. The C/N ratio and ash content showed a typical high rate of change during the first 60 d and reached a plateau thereafter. The HA content increased to a maximum at 112 d, corresponding to the highest plant dry weight and highest 1650/1560 (cm{sup {minus}1}/cm{sup {minus}1}) peak ratios calculated from DRIFT spectra. {sup 13}C-NMR and DRIFT spectra of samples taken from the composting MSW during the process showed that the residual OM contained an increasing level of aromatic structures. Plant-growth bioassay, HA content, and the DRIFT spectra indicated that MSW compost described in this study, stabilized and achieved maturity after about 110 d. 31 refs., 8 figs., 2 tabs.

  14. Proposed Guidelines for Solid Phase Extraction of Suwannee River Dissolved Organic Matter.

    PubMed

    Li, Yan; Harir, Mourad; Lucio, Marianna; Kanawati, Basem; Smirnov, Kirill; Flerus, Ruth; Koch, Boris P; Schmitt-Kopplin, Philippe; Hertkorn, Norbert

    2016-07-01

    This paper proposes improved guidelines for dissolved organic matter (DOM) isolation by solid phase extraction (SPE) with a styrene-divinylbenzene copolymer (PPL) sorbent, which has become an established method for the isolation of DOM from natural waters, because of its ease of application and appreciable carbon recovery. Suwannee River water was selected to systematically study the effects of critical SPE variables such as loading mass, concentration, flow rate, and up-scaling on the extraction selectivity of the PPL sorbent. High-field Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and proton nuclear magnetic resonance ((1)H NMR) spectroscopy were performed to interpret the DOM chemical space of eluates, as well as permeates and wash liquids with molecular resolution. Up to 89% dissolved organic carbon (DOC) recovery was obtained with a DOC/PPL mass ratio of 1:800 at a DOC concentration of 20 mg/L. With the application of larger loading volumes, low proportions of highly oxygenated compounds were retained on the PPL sorbent. The effects of the flow rate on the extraction selectivity of the sorbent were marginal. Up-scaling had a limited effect on the extraction selectivity with the exception of increased self-esterification with a methanol solvent, resulting in methyl ester groups. Furthermore, the SPE/PPL extract exhibited highly authentic characteristics in comparison with original water and reverse osmosis samples. These findings will be useful for reproducibly isolating DOM with representative molecular compositions from various sources and concentrations and minimizing potential inconsistencies among interlaboratory comparative studies. PMID:27176119

  15. Thermal reaction studies of organic model compound-mineral matter interactions in solids

    SciTech Connect

    Buchanan, A.C. III; Britt, P.F.; Thomas, K.B.

    1995-07-01

    The solid-state chemistry of silica-immobilized phenethyl phenyl ethers is being investigated in the presence of interdispersed aluininosilicates at temperatures relevant to coal processing to gain a better understanding of the impact of mineral matter on pyrolysis and liquefaction mechanisms. Results demonstrate the dramatic effect that aluminosilicates can have in altering the normal thermal reaction pathways for these models of ether linkages in lignin and low rank coals. An investigation of the chemistry of these model compounds at low temperatures (ca. 150-200{degrees}C) in the presence of aluminosilicates, including montmorillonite, is currently being investigated to delineate the chemical transformations that can occur during lignin maturation.

  16. Organic free radicals and micropores in solid graphitic carbonaceous matter at the Oklo natural fission reactors, Gabon

    SciTech Connect

    Rigali, M.J.; Nagy, B.

    1997-01-01

    The presence, concentration, and distribution of organic free radicals as well as their association with specific surface areas and microporosities help characterize the evolution and behavior of the Oklo carbonaceous matter. Such information is necessary in order to evaluate uranium mineralization, liquid bitumen solidification, and radio nuclide containment at Oklo. In the Oklo ore deposits and natural fission reactors carbonaceous matter is often referred to as solid graphitic bitumen. The carbonaceous parts of the natural reactors may contain as much as 65.9% organic C by weight in heterogeneous distribution within the clay-rich matrix. The solid carbonaceous matter immobilized small uraninite crystals and some fission products enclosed in this uraninite and thereby facilitated radio nuclide containment in the reactors. Hence, the Oklo natural fission reactors are currently the subjects of detailed studies because they may be useful analogues to support performance assessment of radio nuclide containment at anthropogenic radioactive waste repository sites. Seven carbonaceous matter rich samples from the 1968 {+-} 50 Ma old natural fission reactors and the associated Oklo uranium ore deposit were studied by electron spin resonance (ESR) spectroscopy and by measurements of specific surface areas (BET method). Humic acid, fulvic acid, and fully crystalline graphite standards were also examined by ESR spectroscopy for comparison with the Oklo solid graphitic bitumens. With one exception, the ancient Oklo bitumens have higher organic free radical concentrations than the modem humic and fulvic acid samples. The presence of carbon free radicals in the graphite standard could not be determined due to the conductivity of this material. 72 refs., 7 figs., 1 tab.

  17. Solid state nuclear magnetic resonance spectroscopy in the evaluation of soil organic matter changes following thermal variations

    NASA Astrophysics Data System (ADS)

    de Pasquale, C.; Berns, A. E.; Kucerik, J.; Conte, P.; Alonzo, G.

    2009-04-01

    Soil organic matter (SOM) is an ubiquitous, complex material which is produced by the degradation of plant tissues and animal bodies. It is the major indicator of soil quality since it is directly involved in the maintenance of soil fertility, prevention of erosion and desert encroachment and provision of suitable environment for biological activity. Organic matter is an important driving force in environmental global change as it acts as both a source and sink of atmospheric carbon. However, SOM is subjected to rapid changes due to environmental transformations such as massive deforestations, fires, intensive land uses, temperature increases and so on. In the present work, a characterization of humic substances was done in order to obtain information about the transformation occurring to SOM as affected by temperature increases. For the first time variable temperature cross polarization magic angle spinning (CPMAS) 13C NMR spectroscopy was applied in combination with thermal analyses (TG and DSC) on environmentally relevant soil organic matter. The results show that the conformational changes occurring in humic substances as temperature is raised can be associated to melting of alkyl components connected with sublimation of some organic compounds. The simultaneous application of solid phase micro extraction GC-MS also allowed the identification of the components which were released by sublimation processes.

  18. Soil organic matter dynamics as characterized with 1H and 13C solid-state NMR techniques

    NASA Astrophysics Data System (ADS)

    Jäger, Alex; Schwarz, Jette; Bertmer, Marko; Schaumann, Gabriele E.

    2010-05-01

    Soil organic matter (SOM) is a complex and heterogeneous matter. Characterization by solid-state NMR methods on 1H and 13C nuclei is therefore demanding. Our goal is to obtain information on the dynamic behaviour of soil samples and to study the influence of external parameters on both structure and dynamics. We regard water molecules to be the pivotal agent of soil dynamics by generating a network between organic matter via intermolecular hydrogen bonding, which leads to cross linking of organic matter and increases its rigidity. Although 1H solid-state NMR on non-rotating samples are not so commonly used for soil characterization, they enable the differentiation of proton mobilities via their linewidths which are resulting from differences in the dipole-dipole coupling strengths. Therefore, even weak molecular interactions such as hydrogen bonding can be differentiated and changes due to heat treatments and the short and long term behaviour followed. Though in principle a simple technique, static 1H measurements are complicated by several means, one of them is the high abundance in almost all matter including probe head material that has to be excluded for analysis. Finally, we selected 1H DEPTH [1] and Hahn-echo sequences to distinguish different mobilities in soil, mainly free moving water and water fixed in the soil matrix. After decomposition using Gaussian and Lorentzian lineshapes, the relative amounts of mobile and rigid water molecules can be obtained. By heating the samples above 100°C in sealed glass tubes, the proposed water network is destroyed and able to rebuild after cooling. This long term behaviour is studied on the course of months. Furthermore, the instant changes before and after heating are shown for a series of soil samples to characterize soils based on this water network model. To combine the information obtained on the 1H mobility with focus on water dynamics, 13C 2D WISE (wideline separation) measurements were done. This method yields 1

  19. The assessment of solid-phase organic matter transport in soils with the use of the magnetic tracer method

    NASA Astrophysics Data System (ADS)

    Koshovskii, Timur

    2015-04-01

    Soil organic matters are important product of soil-forming processes, which affects soil fertility, structural, and other soil properties. In addition, soil organic carbon (SOC) stocks of the soil are an significant reservoir of global carbon stock. In this paper we made an attempt to quantify the mass of carbon transported in the solid phase, in the watershed forest-steppe zone (Tula region). The basic erosion and accumulation zone of SOC was identifying in the watershed. Assume the factors that influence the distribution of SOC stocks in the watershed. We used the magnetic tracer method, allowing estimating the volume of soil substance, which transport in solid form. It is based on an assessment of the distribution fly ash in soils. Fly ash drop to the soil surface evenly, and their movement in the soil - it is the result of solid-phase migration. To calculate the volume of transported organic matter, we have assumed that the substance being transferred to the same extent saturated with humus, as well as the substance of the arable layer of chernozems. The transport of SOC in forest-steppe landscapes occurs in the form of dissolved organic carbon (DOC) in runoff water and particulate organic carbon (POC) in erosion sediments. The humus in chernozems is mainly in solid form and therefore poorly transport in a dissolved form. Thus, the calculation of the solid-phase soil material produced by the magnetic tracer method [1], the calculation of the transported POC - by multiplying the humus content on the amount of the transported solid-phase soil material. The object of study was a small watershed area of 0.96 square kilometers, in the Central Russian Upland, Tula region, Russia. Watershed fully plowed, except the steep slopes of the ravine. Predominant soil is a Luvic Chernozems. Within a watershed along 10 catens selected 70 samples from two depths (0-25 and 25-50 cm). In the samples was determined by total organic carbon content and the content of spherical

  20. Organic Solid Matter as a Coloring Agent in Outer Solar System Bodies

    NASA Technical Reports Server (NTRS)

    Cruikshank, D. P.; DalleOre, C. M.; Roush, T. L.; Khare, B. N.; Fonda, Mark (Technical Monitor)

    2002-01-01

    Small bodies in the outer Solar System OSS, exhibit a range of color, or slope of the reflectance in the photovisual spectral region, ranging from neutral to very red, sometimes with and sometimes without distinct absorption bands. These objects range in geometric albedo from 0.03 to 1.0, with the higher albedo objects typically showing clear evidence of water ice. Water ice has also been found in a few objects with albedo 0. 1 or less. We explore here the identification of the material or materials that color these icy and non-icy surfaces through scattering models that incorporate minerals, meteoritic material, and organic solids (tholins) produced ID the laboratory by energy deposition in ices and gases. These models must match not only the color in the photovisual region, but the spectral reflectance properties throughout the near-infrared. Among some classes of objects, such as Kuiper Belt objects, the coloring agent may be a single material that is present in greater or lesser abundance, thus accounting for the range in color from neutral to very red. This may also apply to the Centaur objects, the Jovian Trojans, and the outer-main belt asteroids, each taken as a separate class. If so, each class may be colored to varying degrees by a different material, or they all might be colored by a common material that is widespread throughout the OSS, from 3 to 50 AU, and beyond. In this paper, we model the reflectances of "Kuiper Belt objects, Centaurs, Trojans, outer ARAB asteroids, and planetary satellites. Our models show that the reddest surfaces cannot be colored by minerals or meteoritic materials, but can be matched throughout the photovisual and near-infrared by organic solids, specifically certain tholins.

  1. Solid organic matter in the atmosphere and on the surface of outer solar system bodies

    NASA Astrophysics Data System (ADS)

    Khare, B. N.; Bakes, E. L. O.; Cruikshank, D.; McKay, C. P.

    Many bodies in the outer Solar System display the presence of low albedo materials. These materials, evident on the surface of asteroids, comets, Kuiper Belt objects and their intermediate evolutionary step, Centaurs, are related to macromolecular carbon bearing materials such as polycyclic aromatic hydrocarbons and organic materials such as methanol and related light hydrocarbons, embedded in a dark, refractory, photoprocessed matrix. Many planetary rings and satellites around the outer gaseous planets display such component materials. One example, Saturn's largest satellite, Titan, whose atmosphere is comprised of around 90% molecular nitrogen N 2 and less than 10% methane CH 4, displays this kind of low reflectivity material in its atmospheric haze. These materials were first recorded during the Voyager 1 and 2 flybys of Titan and showed up as an optically thick pinkish orange haze layer. These materials are broadly classified into a chemical group whose laboratory analogs are termed "tholins", after the Greek word for "muddy". Their analogs are produced in the laboratory via the irradiation of gas mixtures and ice mixtures by radiation simulating Solar ultraviolet (UV) photons or keV charged particles simulating particles trapped in Saturn's magenetosphere. Fair analogs of Titan tholin are produced by bombarding a 9:1 mixture of N 2:CH 4 with charged particles and its match to observations of both the spectrum and scattering properties of the Titan haze is very good over a wide range of wavelengths. In this paper, we describe the historical background of laboratory research on this kind of organic matter and how our laboratory investigations of Titan tholin compare. We comment on the probable existence of polycyclic aromatic hydrocarbons in the Titan Haze and how biological and nonbiological racemic amino acids produced from the acid hydrolysis of Titan tholins make these complex organic compounds prime candidates in the evolution of terrestrial life and

  2. Solid organic matter in the atmosphere and on the surface of outer Solar System bodies.

    PubMed

    Khare, B N; Bakes, E L; Cruikshank, D; McKay, C P

    2001-01-01

    Many bodies in the outer Solar System display the presence of low albedo materials. These materials, evident on the surface of asteroids, comets, Kuiper Belt objects and their intermediate evolutionary step, Centaurs, are related to macromolecular carbon bearing materials such as polycyclic aromatic hydrocarbons and organic materials such as methanol and related light hydrocarbons, embedded in a dark, refractory, photoprocessed matrix. Many planetary rings and satellites around the outer gaseous planets display such component materials. One example, Saturn's largest satellite, Titan, whose atmosphere is comprised of around 90% molecular nitrogen N2 and less than 10% methane CH4, displays this kind of low reflectivity material in its atmospheric haze. These materials were first recorded during the Voyager 1 and 2 flybys of Titan and showed up as an optically thick pinkish orange haze layer. These materials are broadly classified into a chemical group whose laboratory analogs are termed "tholins", after the Greek word for "muddy". Their analogs are produced in the laboratory via the irradiation of gas mixtures and ice mixtures by radiation simulating Solar ultraviolet (UV) photons or keV charged particles simulating particles trapped in Saturn's magnetosphere. Fair analogs of Titan tholin are produced by bombarding a 9:1 mixture of N2:CH4 with charged particles and its match to observations of both the spectrum and scattering properties of the Titan haze is very good over a wide range of wavelengths. In this paper, we describe the historical background of laboratory research on this kind of organic matter and how our laboratory investigations of Titan tholin compare. We comment on the probable existence of polycyclic aromatic hydrocarbons in the Titan Haze and how biological and nonbiological racemic amino acids produced from the acid hydrolysis of Titan tholins make these complex organic compounds prime candidates in the evolution of terrestrial life and

  3. Solid-state 13C NMR studies of dissolved organic matter in pore waters from different depositional environments

    USGS Publications Warehouse

    Orem, W.H.; Hatcher, P.G.

    1987-01-01

    Dissolved organic matter (DOM) in pore waters from sediments of a number of different depositional environments was isolated by ultrafiltration using membranes with a nominal molecular weight cutoff of 500. This > 500 molecular weight DOM represents 70-98% of the total DOM in these pore waters. We determined the gross chemical structure of this material using both solid-state 13C nuclear magnetic resonance spectroscopy and elemental analysis. Our results show that the DOM in these pore waters appears to exist as two major types: one type dominated by carbohydrates and paraffinic structures and the second dominated by paraffinic and aromatic structures. We suggest that the dominance of one or the other structural type of DOM in the pore water depends on the relative oxidizing/reducing nature of the sediments as well as the source of the detrital organic matter. Under dominantly anaerobic conditions carbohydrates in the sediments are degraded by bacteria and accumulate in the pore water as DOM. However, little or no degradation of lignin occurs under these conditions. In contrast, sediments thought to be predominantly aerobic in character have DOM with diminished carbohydrate and enhanced aromatic character. The aromatic structures in the DOM from these sediments are thought to arise from the degradation of lignin. The large amounts of paraffinic structures in both types of DOM may be due to the degradation of unidentified paraffinic materials in algal or bacterial remains. ?? 1987.

  4. Selectivity of solid phase extraction of freshwater dissolved organic matter and its effect on ultrahigh resolution mass spectra.

    PubMed

    Raeke, Julia; Lechtenfeld, Oliver J; Wagner, Martin; Herzsprung, Peter; Reemtsma, Thorsten

    2016-07-13

    Solid phase extraction (SPE) is often used for enrichment and clean-up prior to analysis of dissolved organic matter (DOM) by electrospray ionization (ESI) coupled to ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). It is generally accepted that extraction by SPE is not quantitative with respect to carbon concentration. However, little information is available on the selectivity of different SPE sorbents and the resulting effect for the acquired DOM mass spectra. Freshwater samples were extracted by the widely used PPL, HLB and C18 sorbents and the molecular composition and size distribution of the DOM in the extracts and in the permeates was compared to the original sample. Dissolved organic carbon (DOC) recoveries ranged between 20% and 65% for the three tested SPE sorbents. Size-exclusion chromatography coupled to organic carbon detection (SEC-OCD) revealed that limited recovery by PPL and HLB was primarily due to incomplete elution of a fraction of apparent high molecular weight from the solid phase. In contrast, incomplete retention on the solid phase, mainly observed for the C18 cartridge, was attributed to a fraction of low molecular weight. The FT-ICR mass spectra of the original sample and the SPE extracts did not differ significantly in their molecular weight distribution, but they showed sorbent specific differences in the degree of oxygenation and saturation. We concluded that the selective enrichment of freshwater DOM by SPE is less critical for subsequent FT-ICR MS analysis, because those fractions that are not sufficiently recovered have comparatively small effects on the mass spectra. This was confirmed by the extraction of model compounds, showing that very polar and small molecules are poorly extracted, but also have a low response in ESI-MS. Of the three tested SPE cartridges the PPL material offered the best properties for DOM enrichment for subsequent FT-ICR MS analysis as it minimizes too strong and

  5. The Organic Solid State.

    ERIC Educational Resources Information Center

    Cowan, Dwaine O.; Wlygul, Frank M.

    1986-01-01

    Reviews interesting and useful electrical, magnetic, and optical properties of the organic solid state. Offers speculation as to areas of fruitful research. Discusses organic superconductors, conducting organic polymers, organic metals, and traces recent history of creation of organic metals. (JM)

  6. Influence of natural organic matter on the solid-phase extraction of organic micropollutants. Application to the water-extract from highly contaminated river sediment.

    PubMed

    Jeanneau, L; Faure, P; Jardé, E

    2007-11-30

    In freshwater systems, organic micropollutants are bound to natural organic matter (NOM), which is responsible for a decrease in their recoveries by solid-phase extraction (SPE). This "negative effect" has been investigated for the SPE of polycyclic aromatic hydrocarbons (PAHs), oxygenated PAHs, nitrated PAHs and n-alkanes from salt water using Aldrich humic acid as a model of NOM. The effect has been partially obviated by the addition of isopropanol as a surfactant. The SPE protocol, developed with isopropanol, has been applied to the water-extract of a highly contaminated sediment. The water-extract has been size fractionated by cross-flow ultrafiltration into particulate (PM), colloidal (CM) and truly dissolved matter (tDM). Organic extracts from SPE experiments have been analyzed by gas chromatography-mass spectrometry. The major classes of molecules are heteroaromatic PAHs and PAHs. Those molecules are mainly bound to the tDM, which highlights: (1) the competition between organic micropollutants and natural organic molecules for available sorption sites and (2) the toxicological hazard linked to the mobilization of sediments highly contaminated by both industrial and urban activities. PMID:17976632

  7. Chemical structure of soil organic matter in slickspots as investigated by advanced solid-state NMR

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Slickspot soils are saline, and knowledge of their humic chemistry would contribute to our limited understanding how salinity affects soil C and N stocks. We characterized humic acids (HAs) from slickspot soils with solid-state 13C nuclear magnetic resonance (NMR). Expanding on previous use of cross...

  8. Organic matter-solid phase interactions are critical for predicting arsenic release and plant uptake in Bangladesh paddy soils.

    PubMed

    Williams, Paul N; Zhang, Hao; Davison, William; Meharg, Andrew A; Hossain, Mahmud; Norton, Gareth J; Brammer, Hugh; Islam, M Rafiqul

    2011-07-15

    Agroecological zones within Bangladesh with low levels of arsenic in groundwater and soils produce rice that is high in arsenic with respect to other producing regions of the globe. Little is known about arsenic cycling in these soils and the labile fractions relevant for plant uptake when flooded. Soil porewater dynamics of field soils (n = 39) were recreated under standardized laboratory conditions to investigate the mobility and interplay of arsenic, Fe, Si, C, and other elements, in relation to rice grain element composition, using the dynamic sampling technique diffusive gradients in thin films (DGT). Based on a simple model using only labile DGT measured arsenic and dissolved organic carbon (DOC), concentrations of arsenic in Aman (Monsoon season) rice grain were predicted reliably. DOC was the strongest determinant of arsenic solid-solution phase partitioning, while arsenic release to the soil porewater was shown to be decoupled from that of Fe. This study demonstrates the dual importance of organic matter (OM), in terms of enhancing arsenic release from soils, while reducing bioavailability by sequestering arsenic in solution. PMID:21692537

  9. Development of solid-phase microextraction to study dissolved organic matter--polycyclic aromatic hydrocarbon interactions in aquatic environment.

    PubMed

    de Perre, Chloé; Le Ménach, Karyn; Ibalot, Fabienne; Parlanti, Edith; Budzinski, Hélène

    2014-01-01

    Solid-phase microextraction coupled with gas chromatography and mass spectrometry (SPME-GC-MS) was developed for the study of interactions between polycyclic aromatic hydrocarbons (PAHs) and dissolved organic matter (DOM). After the determination of the best conditions of extraction, the tool was applied to spiked water to calculate the dissolved organic carbon water distribution coefficient (K(DOC)) in presence of different mixtures of PAHs and Aldrich humic acid. The use of deuterated naphthalene as internal standard for freely dissolved PAH quantification was shown to provide more accuracy than regular external calibration. For the first time, K(DOC) values of 18 PAHs were calculated using data from SPME-GC-MS and fluorescence quenching; they were in agreement with the results of previous studies. Competition between PAHs, deuterated PAHs and DOM was demonstrated, pointing out the non-linearity of PAH-DOM interactions and the stronger interactions of light molecular weight PAHs (higher K(DOC) values) in absence of high molecular weight PAHs. PMID:24356220

  10. Structural and compositional changes of dissolved organic matter upon solid-phase extraction tracked by multiple analytical tools.

    PubMed

    Chen, Meilian; Kim, Sunghwan; Park, Jae-Eun; Jung, Heon-Jae; Hur, Jin

    2016-09-01

    Although PPL-based solid-phase extraction (SPE) has been widely used before dissolved organic matter (DOM) analyses via advanced measurements such as ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS), much is still unknown about the structural and compositional changes in DOM pool through SPE. In this study, selected DOM from various sources were tested to elucidate the differences between before and after the SPE utilizing multiple analytical tools including fluorescence spectroscopy, FT-ICR-MS, and size exclusion chromatography with organic carbon detector (SEC-OCD). The changes of specific UV absorbance indicated the decrease of aromaticity after the SPE, suggesting a preferential exclusion of aromatic DOM structures, which was also confirmed by the substantial reduction of fluorescent DOM (FDOM). Furthermore, SEC-OCD results exhibited very low recoveries (1-9 %) for the biopolymer fraction, implying that PPL needs to be used cautiously in SPE sorbent materials for treating high molecular weight compounds (i.e., polysaccharides, proteins, and amino sugars). A careful examination via FT-ICR-MS revealed that the formulas lost by the SPE might be all DOM source-dependent. Nevertheless, the dominant missing compound groups were identified to be the tannins group with high O/C ratios (>0.7), lignins/carboxyl-rich alicyclic molecules (CRAM), aliphatics with high H/C >1.5, and heteroatomic formulas, all of which were prevailed by pseudo-analogous molecular formula families with different methylene (-CH2) units. Our findings shed new light on potential changes in the compound composition and the molecular weight of DOM upon the SPE, implying precautions needed for data interpretation. Graphical Abstract Tracking the characteristics of DOM from various origins upon PPL-based SPE utilizing EEMPARAFAC, SEC-OCD, and FT-ICR-MS. PMID:27387996

  11. soil organic matter fractionation

    NASA Astrophysics Data System (ADS)

    Osat, Maryam; Heidari, Ahmad

    2010-05-01

    Carbon is essential for plant growth, due to its effects on other soil properties like aggregation. Knowledge of dynamics of organic matter in different locations in the soil matrix can provide valuable information which affects carbon sequestration and soil the other soil properties. Extraction of soil organic matter (SOM) fractions has been a long standing approach to elucidating the roles of soil organic matter in soil processes. Several kind fractionation methods are used and all provide information on soil organic matter function. Physical fractionation capture the effects on SOM dynamics of the spatial arrangement of primary and secondary organomineral particles in soil while chemical fractionation can not consider the spatial arrangement but their organic fractions are suitable for advanced chemical characterization. Three method of physical separation of soil have been used, sieving, sedimentation and densitometry. The distribution of organic matter within physical fractions of the soil can be assessed by sieving. Sieving separates soil particles based strictly on size. The study area is located on north central Iran, between 35° 41'- 36° 01' N and 50° 42'- 51° 14' E. Mean annual precipitation about 243.8 mm and mean annual air temperature is about 14.95 °C. The soil moisture and temperature regime vary between aridic-thermic in lower altitudes to xeric-mesic in upper altitudes. More than 36 surface soil samples (0-20 cm) were collected according to land-use map units. After preliminary analyzing of samples 10 samples were selected for further analyses in five size fractions and three different time intervals in September, January and April 2008. Fractionation carried out by dry sieving in five classes, 1-2 mm, 0.5-1 mm, 270 μm-0.5mm, 53-270 μm and <53 μm. Organic matter and C/N ratio were determined for all fractions at different time intervals. Chemical fractionation of organic matter also carried out according to Tan (2003), also Mineralogical

  12. Advanced solid-state NMR characterization of marine dissolved organic matter isolated using the coupled reverse osmosis/electrodialysis method.

    PubMed

    Mao, Jingdong; Kong, Xueqian; Schmidt-Rohr, Klaus; Pignatello, Joseph J; Perdue, E Michael

    2012-06-01

    Advanced (13)C solid-state techniques were employed to investigate the major structural characteristics of two surface-seawater dissolved organic matter (DOM) samples isolated using the novel coupled reverse osmosis/electrodialysis method. The NMR techniques included quantitative (13)C direct polarization/magic angle spinning (DP/MAS) and DP/MAS with recoupled dipolar dephasing, (13)C cross-polarization/total sideband suppression (CP/TOSS), (13)C chemical shift anisotropy filter, CH, CH(2), and CH(n) selection, two-dimensional (1)H-(13)C heteronuclear correlation NMR (2D HETCOR), 2D HETCOR combined with dipolar dephasing, and (15)N cross-polarization/magic angle spinning (CP/MAS). The two samples (Coastal and Marine DOM) were collected at the mouth of the Ogeechee River and in the Gulf Stream, respectively. The NMR results indicated that they were structurally distinct. Coastal DOM contained significantly more aromatic and carbonyl carbons whereas Marine DOM was markedly enriched in alkoxy carbon (e.g., carbohydrate-like moieties). Both samples contained significant amide N, but Coastal DOM had nitrogen bonded to aromatic carbons. Our dipolar-dephased spectra indicated that a large fraction of alkoxy carbons were not protonated. For Coastal DOM, our NMR results were consistent with the presence of the major structural units of (1) carbohydrate-like moieties, (2) lignin residues, (3) peptides or amino sugars, and (4) COO-bonded alkyls. For Marine DOM, they were (1) carbohydrate-like moieties, (2) peptides or amino sugars, and (3) COO-bonded alkyls. In addition, both samples contained significant amounts of nonpolar alkyl groups. The potential sources of the major structural units of DOM were discussed in detail. Nonprotonated O-alkyl carbon content was proposed as a possible index of humification. PMID:22553962

  13. Characterization of pyrogenic organic matter by 2-dimenstional HETeronucleus CORelation solid-state 13C NMR (HETCOR) spectroscopy

    NASA Astrophysics Data System (ADS)

    Knicker, Heike

    2016-04-01

    During the last years, increasing evidences are provided that the common view of charcoal as a polyaromatic network is too much simplified. Experiments with model compounds indicated that it represents a heterogeneous mixture of thermally altered biomacromolecules with N, O and likely also S substitutions as common features. If produced from a N-rich feedstock, the so called black nitrogen (BN) has to be considered as an integral part of the aromatic charcoal network. In order to study this network one-dimensional (1D) solid-state nuclear magnetic resonance (NMR) spectroscopy is often applied. However, this technique suffers from broad resonance lines and low resolution. Applying 2D techniques can help but until recently, this was unfeasible for natural organic matter (NOM) due to sensitivity problems and the high complexity of the material. On the other hand, during the last decade, the development of stronger magnetic field instruments and advanced pulse sequences has put them into reach for NOM research. Although 2D NMR spectroscopy has many different applications, all pulse sequences are based on the introduction of a preparation time during which the magnetization of a spin system is adjusted into a state appropriate to whatever properties are to be detected in the indirect dimension. Then, the spins are allowed to evolve with the given conditions and after their additional manipulation during a mixing period the modulated magnetization is detected. Assembling several 1D spectra with incrementing evolution time creates a data set which is two-dimensional in time (t1, t2). Fourier transformation of both dimensions leads to a 2D contour plot correlating the interactions detected in the indirect dimension t1 with the signals detected in the direct dimension t2. The so called solid-state heteronuclear correlation (HETCOR) NMR spectroscopy represents a 2D technique allows the determination which protons are interacting with which carbons. In the present work this

  14. Effects of biochar on organic matter dynamics in unamended soils and soils amended with municipal solid waste compost and sewage sludge

    NASA Astrophysics Data System (ADS)

    Plaza, César; Giannetta, Beatrice; Fernández, José M.; López-de-Sá, Esther G.; Gascó, Gabriel; Méndez, Ana; Zaccone, Claudio

    2015-04-01

    Biochar is a loosely-defined C-rich solid byproduct obtained from biomass pyrolysis, which is intended for use as a soil amendment. A full understanding of the agronomic and environmental potential of biochar, especially its potential as a C sequestration strategy, requires a full understanding of its effects on native soil organic matter, as well as of its interactions with other organic amendments applied to soil. Here we determined the organic C distribution in an arable soil amended with biochar at rates of 0 and 20 t ha-1 in a factorial combination with two types of organic amendment (viz. municipal solid waste compost and sewage sludge) in a field experiment under Mediterranean conditions. The analysis of variance revealed that biochar and organic amendment factors increased significantly total organic C and mineral-associated organic C contents, and had little effect on intra-macroaggregate and intra-microaggregate organic C pools. Free soil organic C content was significantly affected by biochar application, but not by the organic amendments. Especially noteworthy were the interaction effects found between the biochar and organic amendment factors for mineral-associated organic C contents, which suggested a promoting action of biochar on C stabilization in organically-amended soils.

  15. Is old organic matter simple organic matter?

    NASA Astrophysics Data System (ADS)

    Nunan, Naoise; Lerch, Thomas; Pouteau, Valérie; Mora, Philippe; Changey, Fréderique; Kätterer, Thomas; Herrmann, Anke

    2016-04-01

    Bare fallow soils that have been deprived of fresh carbon inputs for prolonged periods contain mostly old, stable organic carbon. In order to shed light on the nature of this carbon, the functional diversity profiles (MicroResp™, Biolog™ and enzyme activity spectra) of the microbial communities of long-term barefallow soils were analysed and compared with those of the microbial communities from their cultivated counterparts. The study was based on the idea that microbial communities adapt to their environment and that therefore the catabolic and enzymatic profiles would reflect the type of substrates available to the microbial communities. The catabolic profiles suggested that the microbial communities in the long-term bare-fallow soil were exposed to a less diverse range of substrates and that these substrates tended to be of simpler molecular forms. Both the catabolic and enzyme activity profiles suggested that the microbial communities from the long-term bare-fallow soils were less adapted to using polymers. These results do not fit with the traditional view of old, stable carbon being composed of complex, recalcitrant polymers. An energetics analysis of the substrate use of the microbial communities for the different soils suggested that the microbial communities from the long-term bare-fallow soils were better adapted to using readily oxidizable,although energetically less rewarding, substrates. Microbial communities appear to adapt to the deprivation of fresh organic matter by using substrates that require little investment.

  16. Ozone uptake and formation of reactive oxygen intermediates on glassy, semi-solid and liquid organic matter

    NASA Astrophysics Data System (ADS)

    Berkemeier, Thomas; Steimer, Sarah S.; Krieger, Ulrich K.; Peter, Thomas; Pöschl, Ulrich; Ammann, Markus; Shiraiwa, Manabu

    2016-04-01

    Heterogeneous and multiphase reactions of ozone are important pathways for chemical ageing of atmospheric organic aerosols (Abbatt, Lee and Thornton, 2012). The effects of particle phase state on the reaction kinetics are still not fully elucidated and cannot be described by classical models assuming a homogeneous condensed phase (Berkemeier et al., 2013). We apply a kinetic multi-layer model, explicitly resolving gas adsorption, condensed phase diffusion and condensed phase chemistry (Shiraiwa et al., 2010), to systematic measurements of ozone uptake onto proxies for secondary organic aerosols (SOA). Our findings show how moisture-induced phase changes affect the gas uptake and chemical transformation of organic matter through change in the physicochemical properties of the substrate: the diffusion coefficients are found to be low under dry conditions, but increase by several orders of magnitude toward higher relative humidity (RH). The solubility of ozone in the dry organic matrix is found to be one order of magnitude higher than in the dilute aqueous solution. The model simulations reveal that at high RH, ozone uptake is mainly controlled by reaction throughout the particle bulk, whereas at low RH, bulk diffusion is retarded severely and reaction at the surface becomes the dominant pathway, with ozone uptake being limited by replenishment of unreacted organic molecules from the bulk phase. The experimental results can only be reconciled including a pathway for ozone self-reaction, which becomes especially important under dry and polluted conditions. Ozone self-reaction can be interpreted as formation and recombination of long-lived reactive oxygen intermediates at the aerosol surface, which could also explain several kinetic parameters and has implications for the health effects of organic aerosol particles. This study hence outlines how kinetic modelling can be used to gain mechanistic insight into the coupling of mass transport, phase changes, and chemical

  17. Arctic River organic matter transport

    NASA Astrophysics Data System (ADS)

    Raymond, Peter; Gustafsson, Orjan; Vonk, Jorien; Spencer, Robert; McClelland, Jim

    2016-04-01

    Arctic Rivers have unique hydrology and biogeochemistry. They also have a large impact on the Arctic Ocean due to the large amount of riverine inflow and small ocean volume. With respect to organic matter, their influence is magnified by the large stores of soil carbon and distinct soil hydrology. Here we present a recap of what is known of Arctic River organic matter transport. We will present a summary of what is known of the ages and sources of Arctic River dissolved and particulate organic matter. We will also discuss the current status of what is known about changes in riverine organic matter export due to global change.

  18. Numerical model for a watering plan to wash out organic matter from the municipal solid waste incinerator bottom ash layer in closed system disposal facilities.

    PubMed

    Ishii, Kazuei; Furuichi, Toru; Tanikawa, Noboru

    2009-02-01

    Bottom ash from municipal solid waste incineration (MSWI) is a main type of waste that is landfilled in Japan. The long-term elution of organic matter from the MSWI bottom ash layers is a concern because maintenance and operational costs of leachate treatment facilities are high. In closed system disposal facilities (CSDFs), which have a roof to prevent rainfall from infiltrating into the waste layers, water must be supplied artificially and its quantity can be controlled. However, the quantity of water needed and how to apply it (the intensity, period and frequency) have not been clearly defined. In order to discuss an effective watering plan, this study proposes a new washout model to clarify a fundamental mechanism of total organic carbon (TOC) elution behavior from MSWI bottom ash layers. The washout model considers three phases: solid, immobile water and mobile water. The parameters, including two mass transfer coefficients of the solid-immobile water phases and immobile-mobile water phases, were determined by one-dimensional column experiments for about 2 years. The intensity, period and frequency of watering and other factors were discussed based on a numerical analysis using the above parameters. As a result, our washout model explained adequately the elution behavior of TOC from the MSWI bottom ash layer before carbonation occurred (pH approximately 8.3). The determined parameters and numerical analysis suggested that there is a possibility that the minimum amount of water needed for washing out TOC per unit weight of MSWI bottom ash layer could be determined, which depends on the two mass transfer coefficients and the depth of the MSWI bottom ash layer. Knowledge about the fundamental mechanism of the elution behavior of TOC from the MSWI bottom ash layer before carbonation occurs, clarified by this study, will help an effective watering plan in CSDFs. PMID:18691865

  19. Sorption and desorption of organic matter on solid-phase extraction media to isolate and identify N-nitrosodimethylamine precursors.

    PubMed

    Hanigan, David; Liao, Xiaobin; Zhang, Jinwei; Herckes, Pierre; Westerhoff, Paul

    2016-07-01

    #x02010;Nitrosodimethylamine is mutagenic in rodents, a drinking water contaminant, and a byproduct of drinking water disinfection by chloramination. Nitrosodimethylamine precursor identification leads to their control and improved understanding of nitrosodimethylamine formation during chloramination. Mass balances on nitrosodimethylamine precursors were evaluated across solid-phase extraction cartridges and in eluates to select the best combination of solid-phase media and eluent that maximized recovery of nitrosodimethylamine precursors into a solvent amenable to time-of-flight mass spectrometry analysis. After reviewing literature and comparing various solid-phase cartridges and eluent combinations, a method was obtained to efficiently recover nitrosodimethylamine precursors. The approach with the greatest recoveries of nitrosodimethylamine precursors involved cation exchange resin loaded with water samples at pH 3 and eluted with 5% NH4 OH in methanol. This indicated that nitrosodimethylamine precursors are amines that protonate at low pH and deprotonate at high pH. Quaternary amines were irreversibly sorbed to the cation exchange cartridge and did not account for a large fraction of precursors. Overall, a median recovery of 82% for nitrosodimethylamine precursors was achieved from 11 surface waters and one wastewater. Applying this method allowed discovery of methadone as a new nitrosodimethylamine precursor in wastewater effluent and drinking water treatment plant intakes. PMID:27184503

  20. Characterization of the Natural Organic Matter (NOM) in groundwater contaminated with (60)Co and (137)Cs using ultrafiltration, Solid Phase Extraction and fluorescence analysis.

    PubMed

    Caron, François; Siemann, Stefan; Riopel, Rémi

    2014-12-01

    Spot samples of shallow groundwaters have been taken between the years 2004 and 2010 near a site formerly used for the dispersal of radioactive liquid wastes. Three sampling points, one clean (upstream), and two downstream of the contamination source, were processed by ultrafiltration (5000 Da cut-off) and Solid Phase Extraction (SPE) to determine the association of selected artificial radionuclides ((60)Co, (137)Cs) with Natural Organic Matter (NOM). The last two sampling episodes (2008 and 2010) also benefited from fluorescence analysis to determine the major character of the NOM. The fluorescence signals are reported as humic-like, fulvic-like and protein-like, which are used to characterize the different NOM types. The NOM from the clean site comprised mostly fine material, whereas the colloidal content (retained by ultrafiltration) was higher (e.g., 15-40% of the Total Organic Carbon - TOC). Most of the 137Cs was present in the colloidal fraction, whereas (60)Co was found in the filtered fraction. Fluorescence analysis, on the other hand, indicated a contrasting behavior between the clean and contaminated sites, with a dominance of protein-like material, a feature usually associated with human impacts. Finally, SPE removed almost quantitatively the protein-like material (>90%), whereas it removed a much smaller fraction of the (137)Cs (<28%). This finding indicates that the (137)Cs preferential binding occurs with a fraction other than the protein-like NOM, likely the fulvic-like or humic-like portion. PMID:24476752

  1. Sulfate and organic matter concentration in relation to hydrogen sulfide generation at inert solid waste landfill site - Limit value for gypsum.

    PubMed

    Asakura, Hiroshi

    2015-09-01

    In order to suggest a limit value for gypsum (CaSO4) for the suppression of hydrogen sulfide (H2S) generation at an inert solid waste landfill site, the relationship between raw material (SO4 and organic matter) for H2S generation and generated H2S concentration, and the balance of raw material (SO4) and product (H2S) considering generation and outflow were investigated. SO4 concentration should be less than approximately 100mg-SO4/L in order to suppress H2S generation to below 2000ppm. Total organic carbon (TOC) concentration should be less than approximately 200mg-C/L assuming a high SO4 concentration. The limit value for SO4 in the ground is 60mg-SO4/kg with 0.011wt% as gypsum dihydrate, i.e., approximately 1/10 of the limit value in inert waste as defined by the EU Council Decision (560mg-SO4/kg-waste). The limit value for SO4 in inert waste as defined by the EU Council Decision is high and TOC is strictly excluded. The cumulative amount of SO4 outflow through the liquid phase is much larger than that through the gas phase. SO4 concentration in pore water decreases with time, reaching half the initial concentration around day 100. SO4 reduction by rainfall can be expected in the long term. PMID:26123977

  2. Estrone degradation: does organic matter (quality), matter?

    PubMed

    Tan, David T; Temme, Hanna R; Arnold, William A; Novak, Paige J

    2015-01-01

    Understanding the parameters that drive E1 degradation is necessary to improve existing wastewater treatment systems and evaluate potential treatment options. Organic matter quality could be an important parameter. Microbial communities grown from activated sludge seeds using different dissolved organic matter sources were tested for E1 degradation rates. Synthetic wastewater was aged, filter-sterilized, and used as a carbon and energy source to determine if recalcitrant organic carbon enhances E1 degradation. Higher E1 degradation was observed by biomass grown on 8 d old synthetic wastewater compared to biomass grown on fresh synthetic wastewater (P = 0.033) despite much lower concentrations of bacteria. Minimal or no E1 degradation was observed in biomass grown on 2 d old synthetic wastewater. Organic carbon analyses suggest that products of cell lysis or microbial products released under starvation stress stimulate E1 degradation. Additional water sources were also tested: lake water, river water, and effluents from a municipal wastewater treatement plant and a treatment wetland. E1 degradation was only observed in biomass grown in treatment effluent. Nitrogen, dissolved organic carbon, and trace element concentrations were not causative factors for E1 degradation. In both experiments, spectrophotometric analyses reveal degradation of E1 is associated with microbially derived organic carbon but not general recalcitrance. PMID:25454582

  3. Ozone uptake on glassy, semi-solid and liquid organic matter and the role of reactive oxygen intermediates in atmospheric aerosol chemistry.

    PubMed

    Berkemeier, Thomas; Steimer, Sarah S; Krieger, Ulrich K; Peter, Thomas; Pöschl, Ulrich; Ammann, Markus; Shiraiwa, Manabu

    2016-05-14

    Heterogeneous and multiphase reactions of ozone are important pathways for chemical ageing of atmospheric organic aerosols. To demonstrate and quantify how moisture-induced phase changes can affect the gas uptake and chemical transformation of organic matter, we apply a kinetic multi-layer model to a comprehensive experimental data set of ozone uptake by shikimic acid. The bulk diffusion coefficients were determined to be 10(-12) cm(2) s(-1) for ozone and 10(-20) cm(2) s(-1) for shikimic acid under dry conditions, increasing by several orders of magnitude with increasing relative humidity (RH) due to phase changes from amorphous solid over semisolid to liquid. Consequently, the reactive uptake of ozone progresses through different kinetic regimes characterised by specific limiting processes and parameters. At high RH, ozone uptake is driven by reaction throughout the particle bulk; at low RH it is restricted to reaction near the particle surface and kinetically limited by slow diffusion and replenishment of unreacted organic molecules. Our results suggest that the chemical reaction mechanism involves long-lived reactive oxygen intermediates, likely primary ozonides or O atoms, which may provide a pathway for self-reaction and catalytic destruction of ozone at the surface. Slow diffusion and ozone destruction can effectively shield reactive organic molecules in the particle bulk from degradation. We discuss the potential non-orthogonality of kinetic parameters, and show how this problem can be solved by using comprehensive experimental data sets to constrain the kinetic model, providing mechanistic insights into the coupling of transport, phase changes, and chemical reactions of multiple species in complex systems. PMID:27095585

  4. Structural changes of humic acids from sinking organic matter and surface sediments investigated by advanced solid-state NMR: Insights into sources, preservation and molecularly uncharacterized components

    NASA Astrophysics Data System (ADS)

    Mao, Jingdong; Tremblay, Luc; Gagné, Jean-Pierre

    2011-12-01

    Knowledge of the structural changes that particulate organic matter (POM) undergoes in natural systems is essential for determining its reactivity and fate. In the present study, we used advanced solid-state NMR techniques to investigate the chemical structures of sinking particulate matter collected at different depths as well as humic acids (HAs) extracted from these samples and underlying sediments from the Saguenay Fjord and the St. Lawrence Lower Estuary (Canada). Compared to bulk POM, HAs contain more non-polar alkyls, aromatics, and aromatic C-O, but less carbohydrates (or carbohydrate-like structures). In the two locations studied, the C and N contents of the samples (POM and HAs) decreased with depth and after deposition onto sediments, leaving N-poor but O-enriched HAs and suggesting the involvement of partial oxidation reactions during POM microbial degradation. Advanced NMR techniques revealed that, compared to the water-column HAs, sedimentary HAs contained more protonated aromatics, non-protonated aromatics, aromatic C-O, carbohydrates (excluding anomerics), anomerics, OC q, O-C q-O, OCH, and OCH 3 groups, but less non-polar alkyls, NCH, and mobile CH 2 groups. These results are consistent with the relatively high reactivity of lipids and proteins or peptides. In contrast, carbohydrate-like structures were selectively preserved and appeared to be involved in substitution and copolymerization reactions. Some of these trends support the selective degradation (or selective preservation) theory. The results provide insights into mechanisms that likely contribute to the preservation of POM and the formation of molecules that escape characterization by traditional methods. Despite the depletion of non-polar alkyls with depth in HAs, a significant portion of their general structure survived and can be assigned to a model phospholipid. In addition, little changes in the connectivities of different functional groups were observed. Substituted and copolymerized

  5. Application of Organic Solid Electrolytes

    NASA Technical Reports Server (NTRS)

    Sekido, S.

    1982-01-01

    If ions are considered to be solid material which transport electric charges, polymer materials can then be considered as organic solid electrolytes. The role of these electrolytes is discussed for (1) ion concentration sensors; (2) batteries using lithium as the cathode and a charge complex of organic material and iodine in the anode; and (3) elements applying electrical double layer capability.

  6. Multi-component trace analysis of organic xenobiotics in surface water containing suspended particular matter by solid phase extraction/gas chromatography-mass spectrometry.

    PubMed

    Erger, Christine; Balsaa, Peter; Werres, Friedrich; Schmidt, Torsten C

    2012-08-01

    Suspended particulate matter (SPM) often disturbs the analysis of surface water by conventional methods, such as liquid-liquid extraction (LLE) or solid phase extraction (SPE), caused by insufficient extraction or by plugging. Water and SPM are therefore often separately analysed, which is associated with high expenditure of time, work and costs. Hence, SPM is partly ignored, if the fraction of sorptively bound analytes is small compared to the total analyte concentration. However, the European Water Framework Directive (WFD, Directive 2000/60/EC) requires explicitly an investigation of the whole water sample including SPM, because many priority and priority hazardous substances can sorb substantially to SPM. Therefore, an SPE disk based method was developed for the determination of 54 priority and priority hazardous pollutants including polycyclic aromatic hydrocarbons (PAH), polychlorinated biphenyls (PCB), polybrominated diphenyl ethers (PBDE), organic chlorinated pesticides (OCP) and other pesticides in surface water containing SPM. The developed SPE disk method allows analysis of 1L surface water containing up to 1000 mg SPM without prior separation of SPM in about 2h including gas chromatography-mass (GC-MS) spectrometry analysis. The limits of quantification vary in a range of 0.8 to 38 ng/L. PMID:22749454

  7. Effects of dissolved organic matter (DOM) sources and nature of solid extraction sorbent on recoverable DOM composition: Implication into potential lability of different compound groups.

    PubMed

    Chen, Meilian; Kim, Sunghwan; Park, Jae-Eun; Kim, Hyun Sik; Hur, Jin

    2016-07-01

    Noting the source-dependent properties of dissolved organic matter (DOM), this study explored the recoverable compounds by solid phase extraction (SPE) of two common sorbents (C18 and PPL) eluted with methanol solvent for contrasting DOM sources via fluorescence excitation-emission matrix coupled with parallel factor analysis (EEM-PARAFAC) and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). Fresh algae and leaf litter extracts DOM, one riverine DOM, and one upstream lacustrine DOM were selected for the comparison. C18 sorbent was generally found to extract more diverse molecular formula, relatively higher molecular weight, and more heteroatomic DOM compounds within the studied mass range than PPL sorbent except for the leaf litter extract. Even with the same sorbent, the main molecular features of the two end member DOM were distributed on different sides of the axes of a multivariate ordination, indicating the source-dependent characteristics of the recoverable compounds by the sorbents. In addition, further examination of the molecular formula uniquely present in the two end members and the upstream lake DOM suggested that proteinaceous, tannin-like, and heteroatomic DOM constituents might be potential compound groups which are labile and easily degraded during their mobilization into downstream watershed. This study provides new insights into the sorbent selectivity of DOM from diverse sources and potential lability of various compound groups. PMID:27117255

  8. Interstellar organic matter in meteorites

    NASA Technical Reports Server (NTRS)

    Yang, J.; Epstein, S.

    1983-01-01

    Deuterium-enriched hydrogen is present in organic matter in such meteorites as noncarbonaceous chondrites. The majority of the unequilibrated primitive meteorites contain hydrogen whose D/H ratios are greater than 0.0003, requiring enrichment (relative to cosmic hydrogen) by isotope exchange reactions taking place below 150 K. The D/H values presented are the lower limits for the organic compounds derived from interstellar molecules, since all processes subsequent to their formation, including terrestrial contamination, decrease their D/H ratios. In contrast, the D/H ratios of hydrogen associated with hydrated silicates are relatively uniform for the meteorites analyzed. The C-13/C-12 ratios of organic matter, irrespective of D/H ratio, lie well within those observed for the earth. Present findings suggest that other interstellar material, in addition to organic matter, is preserved and is present in high D/H ratio meteorites.

  9. Influence of salinity and natural organic matter on the solid phase extraction of sterols and stanols: application to the determination of the human sterol fingerprint in aqueous matrices.

    PubMed

    Jeanneau, L; Jardé, E; Gruau, G

    2011-05-01

    Faecal sterols have been proposed as direct chemical markers for the determination of faecal contamination in inland and coastal waters. In this study, we assess the impact of (a) the concentration of dissolved organic carbon (DOC), (b) the nature of DOC, (c) the salinity and (d) the concentration of sterols and stanols on their solid phase extraction. When natural organic matter (NOM) is modelled by humic acid, increasing DOC concentration from 2.7 to 15.4 mg/L has no significant impact on the recovery of sterols and stanols. The modelling of NOM by a mixture of humic acid and succinoglycan induces a significant (24%) decrease in the recovery of sterols and stanols. For all concentrations of target compounds, no significant increase in recovery is associated with increasing the salinity. Moreover, an increase in the recovery of target compounds is induced by an increase in their concentration. The nine target compounds and the recovery standard (RS) exhibit the same behaviour during the extraction step. Thus, we propose that (a) the concentration of target compounds can be corrected by the RS to calculate more realistic concentrations without modifying their profile and (b) the sterol fingerprint can be investigated in the colloidal fraction of aqueous samples without altering the information it could provide about the source. The application of this analytical method to waste water treatment plant influent and effluents yields results in agreement with previous studies concerning the use of those compounds to differentiate between sources of faecal contamination. We conclude that this analytical method is fully applicable to the determination of sterol fingerprints in the dissolved phase (<0.7 μm) of natural aqueous samples. PMID:21420686

  10. Solid-solution partitioning of organic matter in soils as influenced by an increase in pH or Ca concentration.

    PubMed

    Oste, L A; Temminghoff, E J M; van Riemsdijk, W H

    2002-01-15

    Organic matter is an important component of soil with regard to the binding of contaminants. Hence, the partitioning of organic matter influences the partitioning of soil contaminants. The partitioning of organic matter is, among other factors, influenced by the ionic composition and ionic strength of the soil solution. This study focuses on the behavior of organic matter after a change in the ionic composition of the soil solution, particularly in Ca concentration and pH. Different amounts of Ca(NO3)2 and NaOH were added to soil suspensions. The dissolved organic carbon (DOC) concentration increased with increasing pH (addition of NaOH), whereas an increase in Ca (addition of Ca(NO3)2) had the opposite effect. A stronger increase in DOC was observed if a single dose of NaOH was added, compared to a gradual addition of the same amount of NaOH. Cation binding by organic matter in the supernatant was calculated using the NICA-Donnan model. The log DOC concentration appeared to be correlated to the Donnan potential, calculated under the assumption that all DOC equals humic acid. This correlation was found for all eight neutral to acidic soils used in this study, although the slopes and elevations of the regression lines varied. The slope varied by a factor of 2 and the elevation appeared to be strongly influenced by the DOC concentration in the untreated soils, which is related to the total organic matter in the soil. Finally, we predicted the Donnan potential on the basis of an extraction of untreated soil with 0.03 M NaNO3, and the total additions of Ca(NO3)2 and NaOH. Comparison of these predictions with speciation calculations in solution showed a good correlation, indicating that a combination of one batch experiment and the presented calculation procedure can provide good estimations of DOC concentrations after addition of chemicals. PMID:11831217

  11. Organic Matter in the Outer Solar System

    NASA Technical Reports Server (NTRS)

    Cruiskshank, Dale P.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Many solid bodies in the outer Solar System are covered with ices of various compositions, including water, carbon dioxide, methane, nitrogen, and other molecules that are solid at the low temperatures that prevail there. These ices have all been detected by remote sensing observations made with telescopes on Earth, or more recently, spacecraft in orbit (notably Galileo at Jupiter). The data also reveal other solid materials that could be minerals or complex carbon-bearing organic molecules. A study in progress using large ground-based telescopes to acquire infrared spectroscopic data, and laboratory results on the optical properties of complex organic matter, seeks to identify the non-icy materials on several satellites of Saturn, Uranus, and Neptune. The work on the satellites of Saturn is in part preparatory to the Cassini spacecraft investigation of the Saturn system, which will begin in 2004 and extend for four years.

  12. Solid organ donation and transplantation.

    PubMed

    Furlow, Bryant

    2012-01-01

    Medical imaging plays a key role in solid organ donation and transplantation. In addition to confirming the clinical diagnosis of brain death, imaging examinations are used to assess potential organ donors and recipients, evaluate donated organs, and monitor transplantation outcomes. This article introduces the history, biology, ethics, and institutions of organ donation and transplantation medicine. The article also discusses current and emerging imaging applications in the transplantation field and the controversial role of neuroimaging to confirm clinically diagnosed brain death. PMID:22461345

  13. Similarities in chemical composition of soil organic matter across a millennia-old paddy soil chronosequence as revealed by advanced solid-state NMR spectroscopy

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soil organic matter (SOM) accumulation in paddy soils has aroused considerable attention due to its vital significance in global food, energy, climate, and environmental issues. Considerable progress has been made toward the understanding of changes in the quantity of SOM in paddy soils over a mille...

  14. Potential traceable markers of organic matter in organic and conventional dairy manure using ultraviolet–visible and solid-state 13C nuclear magnetic resonance spectroscopy

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Organic dairy (OD) production is drawing increasing attention because of public concerns about food safety, animal welfare and the potential environmental impacts of conventional dairy (CD) systems. However, very limited information is available on how organic farming practices affect the chemical ...

  15. Extraterrestrial organic matter: a review.

    PubMed

    Irvine, W M

    1998-10-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  16. Extraterrestrial organic matter: a review

    NASA Technical Reports Server (NTRS)

    Irvine, W. M.

    1998-01-01

    We review the nature of the widespread organic material present in the Milky Way Galaxy and in the Solar System. Attention is given to the links between these environments and between primitive Solar System objects and the early Earth, indicating the preservation of organic material as an interstellar cloud collapsed to form the Solar System and as the Earth accreted such material from asteroids, comets and interplanetary dust particles. In the interstellar medium of the Milky Way Galaxy more than 100 molecular species, the bulk of them organic, have been securely identified, primarily through spectroscopy at the highest radio frequencies. There is considerable evidence for significantly heavier organic molecules, particularly polycyclic aromatics, although precise identification of individual species has not yet been obtained. The so-called diffuse interstellar bands are probably important in this context. The low temperature kinetics in interstellar clouds leads to very large isotopic fractionation, particularly for hydrogen, and this signature is present in organic components preserved in carbonaceous chondritic meteorites. Outer belt asteroids are the probable parent bodies of the carbonaceous chondrites, which may contain as much as 5% organic material, including a rich variety of amino acids, purines, pyrimidines, and other species of potential prebiotic interest. Richer in volatiles and hence less thermally processed are the comets, whose organic matter is abundant and poorly characterized. Cometary volatiles, observed after sublimation into the coma, include many species also present in the interstellar medium. There is evidence that most of the Earth's volatiles may have been supplied by a 'late' bombardment of comets and carbonaceous meteorites, scattered into the inner Solar System following the formation of the giant planets. How much in the way of intact organic molecules of potential prebiotic interest survived delivery to the Earth has become an

  17. Photodissolution of soil organic matter

    USGS Publications Warehouse

    Mayer, L.M.; Thornton, K.R.; Schick, L.L.; Jastrow, J.D.; Harden, J.W.

    2012-01-01

    Sunlight has been shown to enhance loss of organic matter from aquatic sediments and terrestrial plant litter, so we tested for similar reactions in mineral soil horizons. Losses of up to a third of particulate organic carbon occurred after continuous exposure to full-strength sunlight for dozens of hours, with similar amounts appearing as photodissolved organic carbon. Nitrogen dissolved similarly, appearing partly as ammonium. Modified experiments with interruption of irradiation to include extended dark incubation periods increased loss of total organic carbon, implying remineralization by some combination of light and microbes. These photodissolution reactions respond strongly to water content, with reaction extent under air-dry to fully wet conditions increasing by a factor of 3-4 fold. Light limitation was explored using lamp intensity and soil depth experiments. Reaction extent varied linearly with lamp intensity. Depth experiments indicate that attenuation of reaction occurs within the top tens to hundreds of micrometers of soil depth. Our data allow only order-of-magnitude extrapolations to field conditions, but suggest that this type of reaction could induce loss of 10-20% of soil organic carbon in the top 10. cm horizon over a century. It may therefore have contributed to historical losses of soil carbon via agriculture, and should be considered in soil management on similar time scales. ?? 2011 Elsevier B.V.

  18. Conversion of organic solids to hydrocarbons

    DOEpatents

    Greenbaum, E.

    1995-05-23

    A method of converting organic solids to liquid and gaseous hydrocarbons includes impregnating an organic solid with photosensitizing ions and exposing the impregnated solid to light in a non-oxidizing atmosphere for a time sufficient to photocatalytically reduce the solid to at least one of a liquid and a gaseous hydrocarbon. 5 Figs.

  19. Conversion of organic solids to hydrocarbons

    DOEpatents

    Greenbaum, Elias

    1995-01-01

    A method of converting organic solids to liquid and gaseous hydrocarbons includes impregnating an organic solid with photosensitizing ions and exposing the impregnated solid to light in a non-oxidizing atmosphere for a time sufficient to photocatalytically reduce the solid to at least one of a liquid and a gaseous hydrocarbon.

  20. The contentious nature of soil organic matter.

    PubMed

    Lehmann, Johannes; Kleber, Markus

    2015-12-01

    The exchange of nutrients, energy and carbon between soil organic matter, the soil environment, aquatic systems and the atmosphere is important for agricultural productivity, water quality and climate. Long-standing theory suggests that soil organic matter is composed of inherently stable and chemically unique compounds. Here we argue that the available evidence does not support the formation of large-molecular-size and persistent 'humic substances' in soils. Instead, soil organic matter is a continuum of progressively decomposing organic compounds. We discuss implications of this view of the nature of soil organic matter for aquatic health, soil carbon-climate interactions and land management. PMID:26595271

  1. Land Application of Wastes: An Educational Program. Organic Matter - Module 17, Objectives, and Script.

    ERIC Educational Resources Information Center

    Clarkson, W. W.; And Others

    This module sketches out the impact of sewage organic matter on soils. For convenience, that organic matter is separated into the readily decomposable compounds and the more resistant material (volatile suspended solids, refractory organics, and sludges). The fates of those organics are reviewed along with loading rates and recommended soil…

  2. Priming of native soil organic matter by pyrogenic organic matter

    NASA Astrophysics Data System (ADS)

    DeCiucies, Silene; Dharmakeerthi, Saman; Whitman, Thea; Woolf, Dominic; Lehmann, Johannes

    2015-04-01

    Priming, in relation to pyrogenic organic matter (PyOM), describes the change in mineralization rate of non-pyrogenic ("native") soil organic matter (nSOM) due to the addition of PyOM. Priming may be 'positive', in that the addition of pyC increases the mineralization rate of native SOM, or 'negative', in that the mineralization rate of nSOM is decreased. Reasons for increased mineralization may include: (i) co-metabolism: microbial decomposition of labile C-additions increases microbial activity, and facilitates additional decomposition of npSOC by active enzymes; (ii) stimulation: substrate additions result in lifted pH, nutrient, oxygen, or water constraints resulting in increased microbial activity. Decreased mineralization may be a result of: (i) inhibition: the opposite of stimulation whereby constraints are aggravated by substrate addition. Substrate addition may also cause inhibition by interfering with enzymes or signaling compounds; (ii) preferential substrate utilization: labile fraction of PyOM additions are preferentially used up by microbes thus causing a decrease in nSOC decomposition; (iii) sorption: organic compounds are adsorbed onto PyOM surfaces, decreasing their rate of mineralization; (iv) stabilization: formation of organo-mineral associations forms stable SOC pools. We have conducted a suite of experiments to investigate these potential interactions. In a seven year long incubation study, PyOM additions increased total OM mineralization for the first 2.5 years, was equal to control after 6.2 years, and was 3% lower after 7.1 years. Cumulative nSOM mineralization was 23% less with the PyOM additions than without, and over 60% of the added PyOM was present in the labile soil fraction after the 7.1 year incubation. Two additional incubation studies, one with and without plants, showed greater nSOM mineralization in the short term and lower nSOM mineralization over the long term. Increased nSOC mineralization due to the presence of plants was

  3. Hydrogenation of organic solid wastes

    SciTech Connect

    Wu, W.R.K.; Kawa, W.

    1980-02-01

    Eight organic solid wastes, six cellulosic and two noncellulosic, were hydrogenated batchwise with and without a catalyst. Conversions obtained range from 64 to 98 % of moisture- and ash-free (maf) raw material; oil yields, 10 to 59 %; and gaseous hydrocarbon yields, 7 to 16 %. Based on batch hydrogenation results, the oil production from large-scale hydrogenation of the wastes is projected to be 1.6 to 3.5 bbl/ton of maf raw material; the gaseous-hydrocarbon production, 2000 to 4100 standard cubic feet (scf). Activities of the two catalysts (SnCl/sub 2// and a combination of Fe/sub 2/O/sub 3/ and H/sub 2/S) used in the hydrogenation of the wastes are discussed. Also discussed are the chemical reactions and mechanisms involved in the hydrogenation, potential market for the product oil, and possible improvement of the oil yield. Elemental compositions of the hydrogenation oils and types of hydrocarbons including oxygenated hydrocarbons found in the oils are presented. The energy equivalent of the organic solid wastes generated in the United States in 1973 is shown to be 27 % of the nation's total 1972 energy production.

  4. Spectral fingerprinting of soil organic matter composition

    NASA Astrophysics Data System (ADS)

    Cecillon, L.; Certini, G.; Lange, H.; Forte, C.; Strand, L. T.

    2009-04-01

    The determination of soil organic matter (SOM) composition relies on a variety of chemical and physical methods, most of them time consuming and expensive. Hitherto, such methodological limitations have hampered the use of detailed SOM composition in process-based models of SOM dynamics, which usually include only three poorly defined carbon pools. Here we show a novel approach merging both near and mid infrared spectroscopy into a single fingerprint for an expeditious prediction of the molecular composition of organic materials in soil, as inferred from a molecular mixing model (MMM) based on 13C nuclear magnetic resonance (NMR), which describes SOM as a mixture of common biologically derived polymers. Infrared and solid-state 13C NMR spectroscopic measurements were performed on a set of mineral and organic soil samples presenting a wide range of organic carbon content (2 to 500 g kg-1), collected in a boreal heathland (Storgama, Norway). The implementation of the MMM using 13C NMR spectra allowed the calculation of five main biochemical components (carbohydrate, protein, lignin, lipids and black carbon) for each sample. Partial least squares regression models were developed for the five biopolymers using outer product analysis of near and mid infrared spectra (Infrared-OPA). All models reached ratios of performance to deviation (RPD) above 2 and specific infrared wavenumbers associated to each biochemical component were identified. Our results demonstrate that Infrared-OPA provides a robust and cost-effective fingerprint of SOM composition that could be useful for the routine assessment of soil carbon pools.

  5. Rosetta/COSIMA: Laboratory time-of-flight secondary ion mass spectra of PAHs for in-situ detection in the cometary solid organic matter

    NASA Astrophysics Data System (ADS)

    Bardyn, A.; Briois, C.; Cottin, H.; Fray, N.; LeRoy, L.; Thirkell, L.; Hilchenbach, M.

    2014-07-01

    ESA's spacecraft called ROSETTA will reach the comet 67P/Churyumov- Gerasimenko in August 2014. During the escort phase of the mission, beginning after the lander (Philae) is released, the COmetary Secondary Ion Mass Analyzer (COSIMA) [1] carried on board will collect and analyse dust grains in the cometary coma. COSIMA is a time-of-flight secondary ion mass spectrometer (TOF-SIMS) with a high mass resolution m/Δ m of 1400 at mass m=100 amu (from FWHM) and mass range from 1 to 3500 amu. The investigations performed by COSIMA on solid cometary grains are aimed to analyze in situ their molecular, elemental, and isotopic composition. The spectra obtained with COSIMA, will be a combination of mass peaks of mineral and organic elements. The organics are expected to be minor peaks, making their identification not simple. To prepare for the future COSIMA spectra interpretation, the COSIMA team members have started to establish a library database of standardized mass spectra [2,3]. High statistics of positive and negative spectra of the samples were then taken in order to get molecular structure information. Polycyclic Aromatic Hydrocarbons (PAHs) are organic macromolecules that could survive harsh radiation environment. They are suspected to be responsible for unidentified infrared bands observed in diverse astrophysical environments. Many attempts were made to demonstrate the presence of PAHs in comets. Tentative attributions of fluorescence emission bands have been made of spectra taken during the Vega-2 mission [4,5], and recently on Stardust samples returned [6]. In this work, we have used the COSIMA prototype based in Orléans to analyze PAHs and alkanes molecules deposition on gold targets.

  6. Cumulative effects of biochar, mineral and organic fertilizers on soil organic matter

    NASA Astrophysics Data System (ADS)

    Plaza, César; López-de-Sá, Esther G.; Gascó, Gabriel; Méndez, Ana; Zaccone, Claudio

    2016-04-01

    We investigated the effect of three consecutive annual applications of biochar at rates of 0 and 20 t ha-1, in a factorial combination with a mineral fertilizer (NPK and nitrosulfate) and two types of organic amendment (municipal solid waste compost and sewage sludge), on soil organic matter in a field experiment under Mediterranean conditions. Biochar increased significantly soil organic C content and C/N ratio. In biochar-amended soils, soil organic C increased significantly with the addition of municipal solid waste compost and sewage sludge. To capture organic matter protection mechanisms related to aggregation and mineral interaction, the soil samples will be fractionated into free (unprotected), intra-macroaggregate, intra-microaggregate, and mineral-associated organic matter pools, and the isolated fractions will be subjected to further chemical and spectroscopic analysis.

  7. Soil Organic Matter in Agricultural Systems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In agricultural systems, soil organic matter (SOM) has been recognized as an important source of nutrients and maintains favorable soil structure. Organic matter is considered a major binding agent that stabilizes soil aggregates. Soil aggregates especially, water stable aggregates, are important i...

  8. Kinetics of desorption of organic compounds from dissolved organic matter.

    PubMed

    Kopinke, Frank-Dieter; Ramus, Ksenia; Poerschmann, Juergen; Georgi, Anett

    2011-12-01

    This study presents a new experimental technique for measuring rates of desorption of organic compounds from dissolved organic matter (DOM) such as humic substances. The method is based on a fast solid-phase extraction of the freely dissolved fraction of a solute when the solution is flushed through a polymer-coated capillary. The extraction interferes with the solute-DOM sorption equilibrium and drives the desorption process. Solutes which remain sorbed to DOM pass through the extraction capillary and can be analyzed afterward. This technique allows a time resolution for the desorption kinetics from subseconds up to minutes. It is applicable to the study of interaction kinetics between a wide variety of hydrophobic solutes and polyelectrolytes. Due to its simplicity it is accessible for many environmental laboratories. The time-resolved in-tube solid-phase microextraction (TR-IT-SPME) was applied to two humic acids and a surfactant as sorbents together with pyrene, phenanthrene and 1,2-dimethylcyclohexane as solutes. The results give evidence for a two-phase desorption kinetics: a fast desorption step with a half-life of less than 1 s and a slow desorption step with a half-life of more than 1 min. For aliphatic solutes, the fast-desorbing fraction largely dominates, whereas for polycyclic aromatic hydrocarbons such as pyrene, the slowly desorbing, stronger-bound fraction is also important. PMID:22035249

  9. Environmental factors regulating soil organic matter chlorination

    NASA Astrophysics Data System (ADS)

    Svensson, Teresia; Montelius, Malin; Reyier, Henrik; Rietz, Karolina; Karlsson, Susanne; Lindberg, Cecilia; Andersson, Malin; Danielsson, Åsa; Bastviken, David

    2016-04-01

    Natural chlorination of organic matter is common in soils. Despite the widespread abundance of soil chlorinated soil organic matter (SOM), frequently exceeding soil chloride abundance in surface soils, and a common ability of microorganisms to produce chlorinated SOM, we lack fundamental knowledge about dominating processes and organisms responsible for the chlorination. To take one step towards resolving the terrestrial chlorine (Cl) puzzle, this study aims to analyse how environmental factors influence chlorination of SOM. Four factors were chosen for this study: soil moisture (W), nitrogen (N), chloride (Cl) and organic matter quality (C). These factors are all known to be important for soil processes. Laboratory incubations with 36Cl as a Cl tracer were performed in a two soil incubation experiments. It was found that addition of chloride and nitrogen seem to hamper the chlorination. For the C treatment, on the other hand, the results show that chlorination is enhanced by increased availability of labile organic matter (glucose and maltose). Even higher chlorination was observed when nitrogen and water were added in combination with labile organic matter. The effect that more labile organic matter strongly stimulated the chlorination rates was confirmed by the second separate experiment. These results indicate that chlorination was not primarily a way to cut refractory organic matter into digestible molecules, representing one previous hypothesis, but is related with microbial metabolism in other ways that will be further discussed in our presentation.

  10. Chemodestructive fractionation of soil organic matter

    NASA Astrophysics Data System (ADS)

    Popov, A. I.; Rusakov, A. V.

    2016-06-01

    The method of chemodestructive fractionation is suggested to assess the composition of soil organic matter. This method is based on determination of the resilience of soil organic matter components and/or different parts of organic compounds to the impact of oxidizing agents. For this purpose, a series of solutions with similar concentration of the oxidant (K2Cr2O7), but with linearly increasing oxidative capacity was prepared. Chemodestructive fractionation showed that the portion of easily oxidizable (labile) organic matter in humus horizons of different soil types depends on the conditions of soil formation. It was maximal in hydromorphic soils of the taiga zone and minimal in automorphic soils of the dry steppe zone. The portion of easily oxidizable organic matter in arable soils increased with an increase in the rate of organic fertilizers application. The long-lasting agricultural use of soils and burying of the humus horizons within the upper one-meter layer resulted in the decreasing content of easily oxidizable organic matter. It was found that the portion of easily oxidizable organic matter decreases by the mid-summer or fall in comparison with the spring or early summer period.

  11. Solid organ transplantation and HIV infection.

    PubMed

    Polak, Wojciech G; Gładysz, Andrzej

    2003-01-01

    HIV infection has been traditionally considered to be an absolute contraindication for solid organ transplantation. Recent advances in HIV treatment, as highly active antiretroviral therapy (HAART), significantly reduced HIV-related mortality and morbidity. At the same time the number of HIV-infected patients with end-stage organ diseases constantly increased. Current data describing solid organ transplantation in HIV-infected patients demonstrated comparable outcome to that in the HIV-negative population. In light of this, solid organ transplantation should be considered as a treatment option for selected HIV-positive patients with end-stage organ disease. PMID:15171000

  12. ENVIRONMENTAL PHOTOPROCESSES INVOLVING NATURAL ORGANIC MATTER

    EPA Science Inventory

    Current research is reviewed on the photoreactions that occur when sunlight interacts with soil and aquatic organic matter. The primary focus is on photoprocesses involving humic substances. Investigations of the direct photoreactions of humic substances are discussed, with empha...

  13. Protective glove material permeation by organic solids.

    PubMed

    Fricker, C; Hardy, J K

    1992-12-01

    A method has been developed for the determination of permeation characteristics of glove materials by organic solids. The system employs a stainless steel exposure cell and allows rapid and uniform contact of either solid disks or powders with minimal membrane bowing. A gas chromatograph equipped with a flame ionization detector was used for monitoring the permeation process, which provided detection limits of 0.9-1.2 ng for the organic solids evaluated. By using an automated system for instrument control and data collection, breakthrough times, steady-state times, and steady-state permeation rates have been determined for five common glove materials when exposed to nine organic solids. PMID:1471595

  14. NMR doesn't lie or how solid-state NMR spectroscopy contributed to a better understanding of the nature and function of soil organic matter (Philippe Duchaufour Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Knicker, Heike

    2016-04-01

    "Nuclear magnetic resonance (NMR) does not lie". More than anything else, this statement of a former colleague and friend has shaped my relation to solid-state NMR spectroscopy. Indeed, if this technique leads to results which contradict the expectations, it is because i) some parts of the instrument are broken, ii) maladjustment of the acquisition parameters or iii) wrong preparation or confusion of samples. However, it may be even simpler, namely that the expectations were wrong. Of course, for researchers, the latter is the most interesting possibility since it forces to reassess accepted views and to search for new explanations. As my major analytical tool, NMR spectroscopy has confronted me with this challenge often enough to turn this issue into the main subject of my talk and to share with the audience how it formed my understanding of function and nature of soil organic matter (SOM). Already shortly after its introduction into soil science in the 1980's, the data obtained with solid-state 13C NMR spectroscopy opened the stage for ongoing discussions, since they showed that in humified SOM aromatic carbon is considerably less important than previously thought. This finding had major implications regarding the understanding of the origin of SOM and the mechanisms by which it is formed. Certainly, the discrepancy between the new results and previous paradigms contributed to mistrust in the reliability of solid-state NMR techniques. The respective discussion has survived up to our days, although already in the 1980's and 1990's fundamental studies could demonstrate that quantitative solid-state NMR data can be obtained if i) correct acquisition parameters are chosen, ii) the impact of paramagnetic compounds is reduced and iii) the presence of soot in soils can be excluded. On the other hand, this mistrust led to a detailed analysis of the impact of paramagnetics on the NMR behavior of C groups which then improved our understanding of the role of carbohydrates

  15. Optimized strategy of 1H and 13C solid-state NMR methods to investigate water dynamics in soil organic matter as well as the influence of crystallinity of poly(methylene) segments

    NASA Astrophysics Data System (ADS)

    Bertmer, Marko; Jaeger, Alexander; Schwarz, Jette; Schaumann, Gabriele

    2010-05-01

    Water plays a crucial role in soil organic matter (SOM) having various different functions such as transport of material, elution of ,e. g., pollutants in soil, and also the sequestration of humic substances. Furthermore, the generation and quantification of hydrophilic and hydrophobic regions in soil has several effects on SOM which can also include the storage amount and time of certain material, especially chemical pollutants. The importance of water in soil is also documented by the multitude of scientific approaches to characterize soils including diffusion NMR to study the water channel structure in soil. Our focus is on the study of water dynamics and soil structure to elucidate mechanisms of physicochemical aging. The approach uses the application of various solid-state NMR techniques - including 1H and 13C NMR - to get a multitude of information on SOM. In non-rotating samples, 1H lines are usually very broad and unstructured. Nevertheless, this rather simple technique allows for a differentiation of 1H containing chemicals based on their dynamics in soil. This includes rather solid soil components and solid as well as mobile water molecules. Based on an optimized 1H solid-state NMR strategy to study soil material together with a straightforward lineshape analysis, a series of soils and peats are characterized. Although even 1H NMR with sample spinning (MAS) often gives only limited information on different structures, we present results on the application of 2D 1H-1H phase-modulated Lee-Goldburg sequences (PMLG), that show already at medium spinning speeds the separation of functional groups. Their quantification can be correlated with sample composition, type of sample conditioning, and other parameters such as cation type or concentration and heat treatment. We are especially interested to correlate NMR data with DSC measurements based on a certain heat treatment of the soils. Our proposed model describes the presence of water in soil as a matrix

  16. Ionic Liquid Extractions of Soil Organic Matter

    NASA Astrophysics Data System (ADS)

    Patti, Antonio; Macfarlane, Douglas; Clarke, Michael

    2010-05-01

    A large range of ionic liquids with the ability to dissolve different classes of natural biopolymers (e.g. cellulose, lignin, protein) have been reported in the literature. These have the potential to isolate different fractions of soil organic matter, thus yielding novel information that is not available through other extraction procedures. The ionic liquids dimethylammonium dimethylcarbamate (DIMCARB), alkylbenzenesulfonate and 1-butyl-3methylimidazolium chloride (Bmim Cl) can solubilise selected components of soil organic matter. Soil extractions with these materials showed that the organic matter recovered showed chemical properties that were consistent with humic substances. These extracts had a slightly different organic composition than the humic acids extracted using the traditional International Humic Substances Society (IHSS) method. The ionic liquids also solubilised some inorganic matter from the soil. Humic acids recovered with alkali were also partially soluble in the ionic liquids. DIMCARB appeared to chemically interfere with organic extract, increasing the level of nitrogen in the sample. It was concluded that the ionic liquid Bmim Cl may function as a useful solvent for SOM, and may be used to recover organic matter of a different character to that obtained with alkali

  17. [Solid organ transplantation in the Czech Republic].

    PubMed

    Kuman, Milan

    2015-01-01

    Solid organ transplantation (heart, lung, liver, kidney, pancreas, small interesting and their combinations) are standard therapy of terminal organ failure. Czech Republic belongs to the states with developed transplantation program. The results correspond with current knowledge and results of leading centers in the world, as demostrated in this article. Organ donor shortage is major factor limiting development of organ transplantations as elsewhere in the Europe or in the world. PMID:26375707

  18. Ground-fire effects on the composition of dissolved and total organic matter in forest floor and soil solutions from Scots pine forests in Germany: new insights from solid state 13C NMR analysis

    NASA Astrophysics Data System (ADS)

    Näthe, Kerstin; Michalzik, Beate; Levia, Delphis; Steffens, Markus

    2016-04-01

    Fires represent an ecosystem disturbance and are recognized to seriously pertubate the nutrient budgets of forested ecosystems. While the effects of fires on chemical, biological, and physical soil properties have been intensively studied, especially in Mediterranean areas and North America, few investigations examined the effects of fire-induced alterations in the water-bound fluxes and the chemical composition of dissolved and particulate organic carbon and nitrogen (DOC, POC, DN, PN). The exclusion of the particulate organic matter fraction (0.45 μm < POM < 500 μm) potentially results in misleading inferences and budgeting gaps when studying the effects of fires on nutrient and energy fluxes. To our best knowledge, this is the first known study to present fire-induced changes on the composition of dissolved and total organic matter (DOM, TOM) in forest floor (FF) and soil solutions (A, B horizon) from Scots pine forests in Germany. In relation to control sites, we test the effects of low-severity fires on: (1) the composition of DOM and TOM in forest floor and soil solutions; and (2) the translocated amount of particulate in relation to DOC and DN into the subsoil. The project aims to uncover the mechanisms of water-bound organic matter transport along an ecosystem profile and its compositional changes following a fire disturbance. Forest floor and soil solutions were fortnightly sampled from March to December 2014 on fire-manipulated and control plots in a Scots pine forest in Central Germany. Shortly after the experimental duff fire in April 2014 pooled solutions samples were taken for solid-state 13C NMR spectroscopy to characterize DOM (filtered solution < 0.8μm pore size) and TOM in unfiltered solutions. Independent from fire manipulation, the composition of TOM was generally less aromatic (aromaticity index [%] according to Hatcher et al., 1981) with values between 18 (FF) - 25% (B horizon) than the DOM fraction with 23 (FF) - 27% (B horizon). For DOM

  19. Organic Matter Loading Affects Lodgepole Pine Seedling Growth

    NASA Astrophysics Data System (ADS)

    Wei, Xiaohua; Li, Qinglin; Waterhouse, M. J.; Armleder, H. M.

    2012-06-01

    Organic matter plays important roles in returning nutrients to the soil, maintaining forest productivity and creating habitats in forest ecosystems. Forest biomass is in increasing demand for energy production, and organic matter has been considered as a potential supply. Thus, an important management question is how much organic matter should be retained after forest harvesting to maintain forest productivity. To address this question, an experimental trial was established in 1996 to evaluate the responses of lodgepole pine seedling growth to organic matter loading treatments. Four organic matter loading treatments were randomly assigned to each of four homogeneous pine sites: removal of all organic matter on the forest floor, organic matter loading quantity similar to whole-tree-harvesting residuals left on site, organic matter loading quantity similar to stem-only-harvesting residuals, and organic matter loading quantity more similar to what would be found in disease- or insect-killed stands. Our 10-year data showed that height and diameter had 29 and 35 % increase, respectively, comparing the treatment with the most organic matter loading to the treatment with the least organic matter loading. The positive response of seedling growth to organic matter loading may be associated with nutrients and/or microclimate change caused by organic matter, and requires further study. The dynamic response of seedling growth to organic matter loading treatments highlights the importance of long-term studies. Implications of those results on organic matter management are discussed in the context of forest productivity sustainability.

  20. HEALTH ASSESSMENT DOCUMENT FOR POLYCYCLIC ORGANIC MATTER

    EPA Science Inventory

    The document responds to Section 122 of the Clean Air Act as Amended August 1977, which requires the Administrator to decide whether atmospheric emissions of polycyclic organic matter (POM) potentially endanger public health. This document reviews POM data on chemical and physica...

  1. Calculation of the thermodynamic properties at elevated temperatures and pressures of saturated and aromatic high molecular weight solid and liquid hydrocarbons in kerogen, bitumen, petroleum, and other organic matter of biogeochemical interest

    NASA Astrophysics Data System (ADS)

    Richard, Laurent; Helgeson, Harold C.

    1998-12-01

    To supplement the relatively sparse set of calorimetric data available for the multitude of high molecular weight organic compounds of biogeochemical interest, group additivity algorithms have been developed to estimate heat capacity power function coefficients and the standard molal thermodynamic properties at 25°C and 1 bar of high molecular weight compounds in hydrocarbon source rocks and reservoirs, including crystalline and liquid isoprenoids, steroids, tricyclic diterpenoids, hopanoids, and polynuclear aromatic hydrocarbons. A total of ninety-six group contributions for each coefficient and property were generated from the thermodynamic properties of lower molecular weight reference species for which calorimetric data are available in the literature. These group contributions were then used to compute corresponding coefficients and properties for ˜360 representative solid and liquid high molecular weight compounds in kerogen, bitumen, and petroleum for which few or no experimental data are available. The coefficients and properties of these high molecular weight compounds are summarized in tables, together with those of the groups and reference species from which they were generated. The tabulated heat capacity power function coefficients and standard molal thermodynamic properties at 25°C and 1 bar include selected crystalline and liquid regular, irregular and highly branched isoprenoids, tricyclic diterpanes, 17α(H)- and 17β(H)-hopanes, 5α(H),14α(H)-, 5β(H),14α(H)-, 5α(H),14β(H)-, and 5β(H),14β(H)-steranes, double ether- and ester-bonded n-alkanes, and various polynuclear aromatic hydrocarbons, including methylated biphenyls, naphthalenes, phenanthrenes, anthracenes, pyrenes, and chrysenes. However, corresponding coefficients and properties for many more saturated and unsaturated high molecular weight hydrocarbons can be estimated from the equations of state group additivity algorithms. Calculations of this kind permit comprehensive

  2. Calculation of the thermodynamic properties at elevated temperatures and pressures of saturated and aromatic high molecular weight solid and liquid hydrocarbons in kerogen, bitumen, petroleum, and other organic matter of biogeochemical interest

    SciTech Connect

    Richard, L.; Helgeson, H.C.

    1998-12-01

    To supplement the relatively sparse set of calorimetric data available for the multitude of high molecular weight organic compounds of biogeochemical interest, group additivity algorithms have been developed to estimate heat capacity power function coefficients and the standard molal thermodynamic properties at 25 C and 1 bar of high molecular weight compounds in hydrocarbon source rocks and reservoirs, including crystalline and liquid isoprenoids, steroids, tricyclic diterpenoids, hopanoids, and polynuclear aromatic hydrocarbons. A total of ninety-six group contributions for each coefficient and property were generated from the thermodynamic properties of lower molecular weight reference species for which calorimetric data are available in the literature. These group contributions were then used to compute corresponding coefficients and properties for {approximately}360 representative solid and liquid high molecular weight compounds in kerogen, bitumen, and petroleum for which few or no experimental data are available. The coefficients and properties of these high molecular weight compounds are summarized in tables, together with those of the groups and reference species from which they were generated. The tabulated heat capacity power function coefficients and standard molal thermodynamic properties at 25 C and 1 bar include selected crystalline and liquid regular, irregular and highly branched isoprenoids, tricyclic diterpanes, 17{alpha}(H)- and 17{beta}(H)-hopanes, 5{alpha}(H),14{alpha}(H)-, 5{beta}(H),14{alpha}(H)-, 5{alpha}(H),14{beta}(H)-, and 5{beta}(H),14{beta}(H)-steranes, double ether- and ester-bonded n-alkanes, and various polynuclear aromatic hydrocarbons, including methylated biphenyls, naphthalenes, phenanthrenes, anthracenes, pyrenes, and chrysenes. However, corresponding coefficients and properties for many more saturated and unsaturated high molecular weight hydrocarbons can be estimated from the equations of state group additivity algorithms

  3. Organic matter of urban soils: A review

    NASA Astrophysics Data System (ADS)

    Vodyanitskii, Yu. N.

    2015-08-01

    Urban environment exerts an ambiguous effect on the organic pool of soils; it may decrease (as compared to the background values) in some parts of a city and increase in other parts. The organic matter accumulation in urban soils is promoted by the input of aerial organic pollutants; slowed down mineralization of plant residues under the influence of contamination; and increased productivity of the plants owing to elevated temperatures, high content of carbon dioxide in the air, and maintenance of green zones (sodding of vast areas in cities, application of peat, irrigation and drainage of soils.)

  4. Approaches to Establishing the Chemical Structure of Extraterrestrial Organic Solids

    NASA Technical Reports Server (NTRS)

    Cody, G. D.; Alexander, C. M. OD.; Wirick, Susan

    2003-01-01

    The majority of extraterrestrial organic matter in carbonaceous chondrites resides in a chemically complex, insoluble and perhaps macromolecular phase. We have been applying a series of independent solid state NMR experiments that are designed to provide a self consistent chemical characterization of this complex material. To date we have thoroughly analyzed 8 organic residues from different meteorites, including a CR2 (EET92042), CIl(Orgueil), CM2 (Murchison), Tagish Lake, CM2 (AlH83100), CM2 (Cold Bokkefeld), CM2 (Mighei), CM3 (Y86720). In fig 1. (1)H to (13)C cross polarization NMR spectra of four of these are shown. Note that there exists an enormous range in chemistry exhibited in organic solid [evident by the breadth of the spectral features both in the aliphatic region (sp(sup 3)) and the aromatic region (sp(sup 2))]. There is also considerable differences in the carbon chemistry across the meteorite groups.

  5. Molecular characterization of soil organic matter: a historic overview

    NASA Astrophysics Data System (ADS)

    Kögel-Knabner, Ingrid; Rumpel, Cornelia

    2014-05-01

    The characterization of individual molecular components of soil organic matter started in the early 19th century, but proceeded slowly. The major focus at this time was on the isolation and differentiation of different humic and fulvic acid fractions, which were considered to have a defined chemical composition and structure. The isolation and structural anlysis of specific individual soil organic matter components became more popular in the early 20th century. In 1936 40 different individual compounds had been isolated and a specific chemical strucutre had been attributed. These structural attributions were confirmed later for some, but not all of these individual compounds. In the 1950 much more individual compounds could be isolated and characterized, using complicated and time consuming chromatography. It became obvious that soil also contains a number of compounds of microbial origin, such as e.g., amino sugars and lipids. With the improvement of chrmoatographic separation techniques and the use of gas chromatography in combination with thin layerchromatography in the 1960 hundreds of individual compounds have been isolated and identified, most of them after chemical degradation of humic or fulvic acids. The chemical degradative techniques were amended with analytical pyrolysis in the 1970s. More and more, bulk soil organic matter was analyzed with these techniques and the advent of solid-stae 13C NMR spectroscopy around the 1980s allowed for the characterization of the composition of bulk soil organic matter. The gas chromatographic separation of organic matter can nowadays be combined with specific detectors, such that specific attributes ofindividual molecules can be analyzed, e.g. the radiocarbon content or the stable isotope composition.

  6. Organic matters: investigating the sources, transport, and fate of organic matter in Fanno Creek, Oregon

    USGS Publications Warehouse

    Sobieszczyk, Steven; Keith, Mackenzie; Goldman, Jami H.; Rounds, Stewart A.

    2015-01-01

    The U.S. Geological Survey (USGS), in cooperation with Clean Water Services, recently completed an investigation into the sources, transport, and fate of organic matter in the Fanno Creek watershed. The information provided by this investigation will help resource managers to implement strategies aimed at decreasing the excess supply of organic matter that contributes to low dissolved-oxygen levels in Fanno Creek and downstream in the Tualatin River during summer. This fact sheet summarizes the findings of the investigation.

  7. Organic matter and sandstone-type uranium deposits: a primer

    USGS Publications Warehouse

    Leventhal, Joel S.

    1979-01-01

    Organic material is intimately associated with sandstone-type uranium deposits in the western United States.. This report gives details of the types of organic matter and their possible role in producing a uranium deposit. These steps include mobilization of uranium from igneous rocks, transportation from the surface, concentration by organic matter, reduction by organic matter, and preservation of the uranium deposit.

  8. Establishing a molecular relationship between chondritic and cometary organic solids

    PubMed Central

    Cody, George D.; Heying, Emily; Alexander, Conel M. O.; Nittler, Larry R.; Kilcoyne, A. L. David; Sandford, Scott A.

    2011-01-01

    Multidimensional solid-state NMR spectroscopy is used to refine the identification and abundance determination of functional groups in insoluble organic matter (IOM) isolated from a carbonaceous chondrite (Murchison, CM2). It is shown that IOM is composed primarily of highly substituted single ring aromatics, substituted furan/pyran moieties, highly branched oxygenated aliphatics, and carbonyl groups. A pathway for producing an IOM-like molecular structure through formaldehyde polymerization is proposed and tested experimentally. Solid-state 13C NMR analysis of aqueously altered formaldehyde polymer reveals considerable similarity with chondritic IOM. Carbon X-ray absorption near edge structure spectroscopy of formaldehyde polymer reveals the presence of similar functional groups across certain Comet 81P/Wild 2 organic solids, interplanetary dust particles, and primitive IOM. Variation in functional group concentration amongst these extraterrestrial materials is understood to be a result of various degrees of processing in the parent bodies, in space, during atmospheric entry, etc. These results support the hypothesis that chondritic IOM and cometary refractory organic solids are related chemically and likely were derived from formaldehyde polymer. The fine-scale morphology of formaldehyde polymer produced in the experiment reveals abundant nanospherules that are similar in size and shape to organic nanoglobules that are ubiquitous in primitive chondrites. PMID:21464292

  9. The anaerobic digestion of solid organic waste.

    PubMed

    Khalid, Azeem; Arshad, Muhammad; Anjum, Muzammil; Mahmood, Tariq; Dawson, Lorna

    2011-08-01

    The accumulation of solid organic waste is thought to be reaching critical levels in almost all regions of the world. These organic wastes require to be managed in a sustainable way to avoid depletion of natural resources, minimize risk to human health, reduce environmental burdens and maintain an overall balance in the ecosystem. A number of methods are currently applied to the treatment and management of solid organic waste. This review focuses on the process of anaerobic digestion which is considered to be one of the most viable options for recycling the organic fraction of solid waste. This manuscript provides a broad overview of the digestibility and energy production (biogas) yield of a range of substrates and the digester configurations that achieve these yields. The involvement of a diverse array of microorganisms and effects of co-substrates and environmental factors on the efficiency of the process has been comprehensively addressed. The recent literature indicates that anaerobic digestion could be an appealing option for converting raw solid organic wastes into useful products such as biogas and other energy-rich compounds, which may play a critical role in meeting the world's ever-increasing energy requirements in the future. PMID:21530224

  10. Analysis of Organic matter from cloud particles

    NASA Astrophysics Data System (ADS)

    Bank, Shelton; Castillo, Raymond

    1987-03-01

    Organic matter collected from filtration of two separate cloud events was analysed by Fourier Transform Infrared Spectroscopy. Particles collected from different size filters were separated by color and each type of particle gave rise to a characteristic spectrum. The major constituents were identified as complex proteins and cellulose. Additionally, some degraded material (likely protein) and an unidentified orange-brown material were present. Finally some trace components were identified as wax, oil, silicon oil, polyvinyl chloride, calcium carbonate, clay, sand and polyethylene.

  11. Isotopic analysis of cometary organic matter

    NASA Technical Reports Server (NTRS)

    Kerridge, John F.

    1991-01-01

    Carbon isotope ratios have been measured for CN in the coma of Comet Halley and for several CHON particles emitted by Halley. Of these, only the CHON-particle data may be reasonably related to organic matter in the cometary nucleus, but the true range of (C-13)/(C-12) values in those particles is quite uncertain. The D/H ratio in H2O in the Halley coma resembles that in Titan/Uranus.

  12. Organic matter matters for ice nuclei of agricultural soil origin

    NASA Astrophysics Data System (ADS)

    Tobo, Y.; DeMott, P. J.; Hill, T. C. J.; Prenni, A. J.; Swoboda-Colberg, N. G.; Franc, G. D.; Kreidenweis, S. M.

    2014-04-01

    Heterogeneous ice nucleation is a~crucial process for forming ice-containing clouds and subsequent ice-induced precipitation. The importance for ice nucleation of airborne desert soil dusts composed predominantly of minerals is relatively well understood. On the other hand, the potential influence of agricultural soil dusts on ice nucleation has been poorly recognized, despite recent estimates that they may account for up to ∼25% of the global atmospheric dust load. We have conducted freezing experiments with various dusts, including agricultural soil dusts derived from the largest dust source region in North America. Here we show evidence for the significant role of soil organic matter (SOM) in particles acting as ice nuclei (IN) under mixed-phase cloud conditions. We find that the ice nucleating ability of the agricultural soil dusts is similar to that of desert soil dusts, but is reduced to almost the same level as that of clay minerals (e.g., kaolinite) after either H2O2 digestion or dry heating to 300 °C. In addition, based on chemical composition analysis, we show that organic-rich particles are more important than mineral particles for the ice nucleating ability of the agricultural soil dusts at temperatures warmer than about -36 °C. Finally, we suggest that such organic-rich particles of agricultural origin (namely, SOM particles) may contribute significantly to the ubiquity of organic-rich IN in the global atmosphere.

  13. Organic matter matters for ice nuclei of agricultural soil origin

    NASA Astrophysics Data System (ADS)

    Tobo, Y.; DeMott, P. J.; Hill, T. C. J.; Prenni, A. J.; Swoboda-Colberg, N. G.; Franc, G. D.; Kreidenweis, S. M.

    2014-08-01

    Heterogeneous ice nucleation is a crucial process for forming ice-containing clouds and subsequent ice-induced precipitation. The importance for ice nucleation by airborne desert soil dusts composed predominantly of minerals is widely acknowledged. However, the potential influence of agricultural soil dusts on ice nucleation has been poorly recognized, despite recent estimates that they may account for up to 20-25% of the global atmospheric dust load. We have conducted freezing experiments with various dusts, including agricultural soil dusts derived from the largest dust-source region in North America. Here we show evidence for the significant role of soil organic matter (SOM) in particles acting as ice nuclei (IN) under mixed-phase cloud conditions. We find that the ice-nucleating ability of the agricultural soil dusts is similar to that of desert soil dusts, but is clearly reduced after either H2O2 digestion or dry heating to 300 °C. In addition, based on chemical composition analysis, we demonstrate that organic-rich particles are more important than mineral particles for the ice-nucleating ability of the agricultural soil dusts at temperatures warmer than about -36 °C. Finally, we suggest that such organic-rich particles of agricultural origin (namely, SOM particles) may contribute significantly to the ubiquity of organic-rich IN in the global atmosphere.

  14. Isolation and chemical characterization of dissolved and colloidal organic matter

    USGS Publications Warehouse

    Aiken, G.; Leenheer, J.

    1993-01-01

    Commonly used techniques for the concentration and isolation of organic matter from water, such as preparative chromatography, ultrafiltration and reverse osmosis, and the methods used to analyze the organic matter obtained by these methods are reviewed. The development of methods to obtain organic matter that is associated with fractions of the dissolved organic carbon other than humic substances, such as organic bases, hydrophilic organic acids and colloidal organic matter are discussed. Methods specifically used to study dissolved organic nitrogen and dissolved organic phosphorous are also discussed. -from Authors

  15. Abiotic Bromination of Soil Organic Matter.

    PubMed

    Leri, Alessandra C; Ravel, Bruce

    2015-11-17

    Biogeochemical transformations of plant-derived soil organic matter (SOM) involve complex abiotic and microbially mediated reactions. One such reaction is halogenation, which occurs naturally in the soil environment and has been associated with enzymatic activity of decomposer organisms. Building on a recent finding that naturally produced organobromine is ubiquitous in SOM, we hypothesized that inorganic bromide could be subject to abiotic oxidations resulting in bromination of SOM. Through lab-based degradation treatments of plant material and soil humus, we have shown that abiotic bromination of particulate organic matter occurs in the presence of a range of inorganic oxidants, including hydrogen peroxide and assorted forms of ferric iron, producing both aliphatic and aromatic forms of organobromine. Bromination of oak and pine litter is limited primarily by bromide concentration. Fresh plant material is more susceptible to bromination than decayed litter and soil humus, due to a labile pool of mainly aliphatic compounds that break down during early stages of SOM formation. As the first evidence of abiotic bromination of particulate SOM, this study identifies a mechanistic source of the natural organobromine in humic substances and the soil organic horizon. Formation of organobromine through oxidative treatments of plant material also provides insights into the relative stability of aromatic and aliphatic components of SOM. PMID:26468620

  16. Soil organic matter composition affected by potato cropping managements

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Organic matter is a small but important soil component. As a heterogeneous mixture of geomolecules and biomolecules, soil organic matter (SOM) can be fractionated into distinct pools with different solubility and lability. Water extractable organic matter (WEOM) fraction is the most labile and mobil...

  17. The neurology of solid organ transplantation.

    PubMed

    Avila, J David; Živković, Saša

    2015-07-01

    Transplantation is the rescue treatment for end-stage organ failure with more than 110,000 solid organs transplantations performed worldwide annually. Recent advances in transplantation procedures and posttransplantation management have improved long-term survival and quality of life of transplant recipients, shifting the focus from acute perioperative critical care needs toward long-term chronic medical problems. Neurologic complications affect up to 30-60 % of solid organ transplant recipients. Common etiologies include opportunistic infections and toxicities of antirejection medications, and wide spectrum of toxic and metabolic disturbances. Most complications are common to all allograft types, but some are relatively specific for individual allograft types (e.g., central pontine myelinolysis in liver transplant recipients). Close collaboration between neurologists and other transplant team members is essential for effective management. Early recognition of complications and accurate diagnosis leading to timely treatment is essential to reduce the morbidity and improve the overall transplant outcome. PMID:26008808

  18. Solid Solution Model for Interstellar Dust Grains and Their Organics

    NASA Astrophysics Data System (ADS)

    Freund, Minoru M.; Freund, Friedemann T.

    2006-03-01

    We present a dust grain model based on the fundamental principle of solid solutions. The model is applicable to the mineral (silicate) component of the dust in the interstellar medium (ISM). We show that nanometer-sized mineral grains, which condense in the gas-rich outflow of late-stage stars or expanding gas shells of supernova explosions, do not consist of just high melting point oxides or silicates. Instead they form solid solutions with gas-phase components H2O, CO, and CO2 that are omnipresent in environments where the grains condense. Through a series of thermodynamically well-understood solid-state processes, these solid solutions become ``parents'' of organic matter that precipitates inside the grains. Thus, the mineral dust grains and their organics become part of the same thermodynamically defined solid phase and, hence, physically inseparable. This model can account for many astronomical observations, which no prior model can adequately address, specifically: (1) Organics in the diffuse ISM are identified by a 3.4 μm IR band, characteristic of aliphatic hydrocarbons composed of CH2 and of CH3 groups. (2) The methylene-to-methyl ratio is nearly constant, implying a CH2:CH3 ratio of ~5:2. (3) The intensity ratio between the 9.7 and the 3.4 μm band is nearly constant, implying a silicate-to-organics ratio of ~10:1. (4) In dense clouds the complex 3.4 μm band is replaced by a weak, featureless 3.47 μm band. (5) Whereas silicate grains identified by their 9.7 μm band tend to align in magnetic fields, grains with a strong 3.4 μm organic signature do not tend to align.

  19. Editorial: Immune monitoring in solid organ transplantation.

    PubMed

    Shipkova, Maria; Wieland, Eberhard

    2016-03-01

    Solid organ transplantation is inevitably associated with the activation of the immune system of the graft recipient. An advanced knowledge of the immunological mechanisms leading to acute and chronic rejection, the advent of powerful immunosuppressive drugs, and refined surgical techniques have made solid organ transplantation a standard therapy to replace irretrievable loss of vital functions. The immune system is a complex network involving immune cells, cytokines, chemokines, antibodies, and the complement system. Monitoring and ideally influencing the allo-response of the organ recipient against the donor antigens may help to personalize the immunosuppressive therapy including the disclosure of those patients who are suitable for weaning or even discontinuation of immunosuppression. Immune monitoring comprises as plethora of candidate biomarkers capable of reflecting the donor specific and non-donor specific net activation state of the immune system in transplant recipients both before and after initiation of the immunosuppressive therapy. This special issue of Clinical Biochemistry on Immune Monitoring addresses the basic effects of immune activation in solid organ transplantation and critically reviews candidate biomarkers for immune monitoring and their analytical as well as clinical performance. PMID:26794634

  20. Soil organic matter prediction using environmental factors

    NASA Astrophysics Data System (ADS)

    Oueslati, I.; Allamano, P.; Claps, P.; Bonifacio, E.

    2009-04-01

    Organic matter is one of the most important properties affecting soil chemical and physical fertility, but it influences also soil hydrologic parameters. It is easily measured by chemical analyses, but in large scale studies its prediction is desirable. This study aims at predicting the spatial distribution of the soil organic matter concentration (SOM) in forest topsoils in Piedmont (North West Italy) using continuous predictors (in forms of auxiliary maps). As predictors we selected: the digital elevation model (DEM, 50 meter resolution), the mean annual precipitation, the soil dryness index and normal difference vegetation index (NDVI, 1 km resolution). Using the Geographic Information System SAGA, the terrain attributes were computed from the DEM, namely are: elevation, slope, aspect and mean curvature associated with hydrological parameters namely, the compound topographic index (CTI) and stream power index (SPI). From the long term monthly average of NDVI the mean annual value and the coefficient of variation (CV) were also derived. This data set was used to estimate the SOM concentration by regression analysis. To test the relationship between the SOM and the environmental variables, 66 soil profiles were used. Several variables were found to be significantly correlated with SOM concentration: elevation, slope, mean NDVI, CV(NDVI), precipitation and dryness index, with correlation coefficients, r, of the linear regressions ranging from 0.12 to 0.63. However, only precipitation and mean NDVI were retained when a stepwise multiple regression was used. Although these two predictors contribute only partially to explain SOM variability (R2=0.42). The importance of vegetation is clearly depicted by the significant effect of NDVI, while the precipitation may contribute to the explanation in a less direct way because of the complex links between climate and organic matter transformation in soils.

  1. The fate of airborne polycyclic organic matter.

    PubMed Central

    Nielsen, T; Ramdahl, T; Bjørseth, A

    1983-01-01

    Biological tests have shown that a significant part of the mutagenicity of organic extracts of collected airborne particulate matter is not due to polycyclic aromatic hydrocarbons (PAH). It is possible that part of these unknown compounds are transformation products of PAH. This survey focuses on the reaction of PAH in the atmosphere with other copollutants, such as nitrogen oxides, sulfur oxides, ozone and free radicals and their reaction products. Photochemically induced reactions of PAH are also included. The reactivity of particle-associated PAH is discussed in relation to the chemical composition and the physical properties of the carrier. Recommendations for future work are given. PMID:6825615

  2. Mapping Soil Organic Matter with Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Moni, Christophe; Burud, Ingunn; Flø, Andreas; Rasse, Daniel

    2014-05-01

    Soil organic matter (SOM) plays a central role for both food security and the global environment. Soil organic matter is the 'glue' that binds soil particles together, leading to positive effects on soil water and nutrient availability for plant growth and helping to counteract the effects of erosion, runoff, compaction and crusting. Hyperspectral measurements of samples of soil profiles have been conducted with the aim of mapping soil organic matter on a macroscopic scale (millimeters and centimeters). Two soil profiles have been selected from the same experimental site, one from a plot amended with biochar and another one from a control plot, with the specific objective to quantify and map the distribution of biochar in the amended profile. The soil profiles were of size (30 x 10 x 10) cm3 and were scanned with two pushbroomtype hyperspectral cameras, one which is sensitive in the visible wavelength region (400 - 1000 nm) and one in the near infrared region (1000 - 2500 nm). The images from the two detectors were merged together into one full dataset covering the whole wavelength region. Layers of 15 mm were removed from the 10 cm high sample such that a total of 7 hyperspectral images were obtained from the samples. Each layer was analyzed with multivariate statistical techniques in order to map the different components in the soil profile. Moreover, a 3-dimensional visalization of the components through the depth of the sample was also obtained by combining the hyperspectral images from all the layers. Mid-infrared spectroscopy of selected samples of the measured soil profiles was conducted in order to correlate the chemical constituents with the hyperspectral results. The results show that hyperspectral imaging is a fast, non-destructive technique, well suited to characterize soil profiles on a macroscopic scale and hence to map elements and different organic matter quality present in a complete pedon. As such, we were able to map and quantify biochar in our

  3. Organic matter oxidation and aragonite diagenesis in a coral reef

    SciTech Connect

    Tribble, G.W. Univ. of Hawaii, Honolulu )

    1993-05-01

    A combination of field and theoretical work is used to study controls on the saturation state of aragonite inside a coral-reef framework. A closed-system ion-speciation model is used to evaluate the effect of organic-matter oxidation on the saturation state of aragonite. The aragonite saturation state initially drops below 1 but becomes oversaturated during sulfate reduction. The C:N ratio of the organic matter affects the degree of oversaturation with N-poor organic material resulting in a system more corrosive to aragonite. Precipitation of sulfide as FeS strongly affects the aragonite saturation state, and systems with much FeS formation will have a stronger tendency to become oversaturated with respect to aragonite. Both precipitation and dissolution of aragonite are predicted at different stages of the organic reaction pathway if the model system is maintained at aragonite saturation. Field data from a coral-reef framework indicate that the system maintains itself at aragonite saturation, and model-predicted changes in dissolved calcium follow those observed in the interstitial waters of the reef. Aragonite probably acts as a solid-phase buffer in regulating the pH of interstitial waters. Because interstitial water in the reef has a short residence time, the observed equilibration suggests rapid kinetics.

  4. Partition of nonpolar organic pollutants from water to soil and sediment organic matters

    USGS Publications Warehouse

    Chiou, C.T.

    1995-01-01

    The partition coefficients (Koc) of carbon tetrachloride and 1,2-dichlorobenzene between normal soil/sediment organic matter and water have been determined for a large set of soils, bed sediments, and suspended solids from the United States and the People's Republic of China. The Koc values for both solutes are quite invariant either for the soils or for the bed sediments; the values on bed sediments are about twice those on soils. The similarity of Koc values between normal soils and between normal bed sediments suggests that natural organic matters in soils (or sediments) of different geographic origins exhibit comparable polarities and possibly comparable compositions. The results also suggest that the process that converts eroded soils into bed sediments brings about a change in the organic matter property. The difference between soil and sediment Koc values provides a basis for identifying the source of suspended solids in river waters. The very high Koc values observed for some special soils and sediments are diagnostic of severe anthropogenic contamination.

  5. DNA Extraction: Organic and Solid-Phase.

    PubMed

    Altayari, Wafa

    2016-01-01

    DNA extraction remains a critical step in DNA profiling of biological material recovered from scenes of crime. In the forensic community several methods have gained popularity, including Chelex(®), organic extraction, and solid-phase extraction. While some laboratories streamlined their processes and only use one method we have retained several methods and continue to use these for different sample types. In this chapter we present three methods that have been used for several years in our laboratory. PMID:27259731

  6. The composition and degradability of upland dissolved organic matter

    NASA Astrophysics Data System (ADS)

    Moody, Catherine; Worrall, Fred; Clay, Gareth

    2016-04-01

    In order to assess controls on the degradability of DOM in stream water, samples of dissolved organic matter (DOM) and particulate organic matter (POM) were collected every month for a period of 24 months from an upland, peat-covered catchment in northern England. Each month the degradability of the DOM was assessed by exposing river water to light for up to 24 hours, and the change in the dissolved organic carbon (DOC) concentration in the water was measured. To provide context for the analysis of DOM and its degradability, samples of peat, vegetation, and litter were also taken from the same catchment and analysed. The organic matter samples were analysed by several methods including: elemental analysis (CHN and O), bomb calorimetry, thermogravimetric analysis, pyrolysis GC/MS, ICP-OES, stable isotope analysis (13C and 15N) and 13C solid state nuclear magnetic resonance (NMR). The water samples were analysed for pH, conductivity, absorbance at 400nm, anions, cations, particulate organic carbon (POC) and DOC concentrations. River flow conditions and meteorology were also recorded at the site and included in the analysis of the composition and degradability of DOM. The results of multiple regression models showed that the rates of DOC degradation were affected by the N-alkyl, O-alkyl, aldehyde and aromatic relative intensities, gross heat, OR and C:N. Of these, the N-alkyl relative intensity had the greatest influence, and this in turn was found to be dependent on the rainfall and soil temperature in the week before sampling.

  7. Thermodynamic modeling for organic solid precipitation

    SciTech Connect

    Chung, T.H.

    1992-12-01

    A generalized predictive model which is based on thermodynamic principle for solid-liquid phase equilibrium has been developed for organic solid precipitation. The model takes into account the effects of temperature, composition, and activity coefficient on the solubility of wax and asphaltenes in organic solutions. The solid-liquid equilibrium K-value is expressed as a function of the heat of melting, melting point temperature, solubility parameter, and the molar volume of each component in the solution. All these parameters have been correlated with molecular weight. Thus, the model can be applied to crude oil systems. The model has been tested with experimental data for wax formation and asphaltene precipitation. The predicted wax appearance temperature is very close to the measured temperature. The model not only can match the measured asphaltene solubility data but also can be used to predict the solubility of asphaltene in organic solvents or crude oils. The model assumes that asphaltenes are dissolved in oil in a true liquid state, not in colloidal suspension, and the precipitation-dissolution process is reversible by changing thermodynamic conditions. The model is thermodynamically consistent and has no ambiguous assumptions.

  8. Neurological Complications of Solid Organ Transplantation

    PubMed Central

    Pruitt, Amy A.; Graus, Francesc; Rosenfeld, Myrna R.

    2013-01-01

    Solid organ transplantation (SOT) is the preferred treatment for an expanding range of conditions whose successful therapy has produced a growing population of chronically immunosuppressed patients with potential neurological problems. While the spectrum of neurological complications varies with the type of organ transplanted, the indication for the procedure, and the intensity of long-term required immunosuppression, major neurological complications occur with all SOT types. The second part of this 2-part article on transplantation neurology reviews central and peripheral nervous system problems associated with SOT with clinical and neuroimaging examples from the authors’ institutional experience. Particular emphasis is given to conditions acquired from the donated organ or tissue, problems specific to types of organs transplanted and drug therapy-related complications likely to be encountered by hospitalists. Neurologically important syndromes such as immune reconstitution inflammatory syndrome (IRIS), posterior reversible encephalopathy syndrome (PRES), and posttransplantation lymphoproliferative disorder (PTLD) are readdressed in the context of SOT. PMID:24167649

  9. Soil organic matter mineralization in frozen soils

    NASA Astrophysics Data System (ADS)

    Harrysson Drotz, S.; Sparrman, T.; Schleucher, J.; Nilsson, M.; Öquist, M. G.

    2009-12-01

    Boreal forest soils are frozen for a large part of the year and soil organic matter mineralization during this period has been shown to significantly influence the C balance of boreal forest ecosystems. Mineralization proceeds through heterotrophic microbial activity, but the understanding of the environmental controls regulating soil organic matter mineralization under frozen conditions is poor. Through a series of investigations we have addressed this issue in order to elucidate to what extent a range of environmental factors control mineralization processes in frozen soils and also the microbial communities potential to oxidize organic substrates and grow under such conditions. The unfrozen water content in the frozen soils was shown to be an integral control on the temperature response of biogenic CO2 production across the freezing point of bulk soil water. We found that osmotic potential was an important contributor to the total water potential and, hence, the unfrozen water content of frozen soil. From being low and negligible in an unfrozen soil, the osmotic potential was found to contribute up to 70% of the total water potential in frozen soil, greatly influencing the volume of liquid water. The specific factors of how soil organic matter composition affected the unfrozen water content and CO2 production of frozen soil were studied by CP-MAS NMR. We concluded that abundance of aromatics and recalcitrant compounds showed a significant positive correlation with unfrozen water content and these were also the major soil organic fractions that similarly correlated with the microbial CO2 production of the frozen soils. Thus, the hierarchy of environmental factors controlling SOM mineralization changes as soils freeze and environmental controls elucidated from studies of unfrozen systems can not be added on frozen conditions. We have also investigated the potential activity of soil microbial communities under frozen conditions in order to elucidate temperature

  10. Stability of Ferrihydrite and Organic Matter in Ferrihydrite-Organic Matter Associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, K.; Totsche, K. U.

    2015-12-01

    Iron oxides can bind particularly large amounts of organic matter (OM) and seem to be an important control on OM storage in many soils. To better understand the interactions between Fe oxides and OM, we produced ferrihydrite-OM associations by adsorption and coprecipitation in laboratory experiments. Because ferrihydrites are often formed in OM-rich solutions, we assume that coprecipitation is a common process in nature. In contrast to adsorption on pre-existing ferrihydrite surfaces, coprecipitation involves adsorption, occlusion (physical entrapment of OM), formation of Fe-OM complexes, and poisoning of ferrihydrite growth. The reactivity of coprecipitates may therefore differ from ferriydrites with adsorbed OM. Incubation experiments with an inoculum extracted from a Podzol forest-floor were carried out to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of associated OM led to decreasing initial reaction rates and a decreasing degree of dissolution. Reduction of coprecipitated ferrihydrites was faster than reduction of ferrihydrites with adsorbed OM. Our data demonstrate that the association with ferrihydrite can effectively stabilize labile polysaccharides. Vice versa, these polysaccharides may protect ferrihydrite from reduction by Geobacter-like bacteria. However, a challenge for future studies will be to link formation and degradation of mineral-organic associations to natural porous systems, that is, to the complex interplay of mass transport and microbial distribution in the

  11. Dissolved organic matter in anoxic pore waters from Mangrove Lake, Bermuda

    USGS Publications Warehouse

    Orem, W.H.; Hatcher, P.G.; Spiker, E. C.; Szeverenyi, N.M.; Maciel, G.E.

    1986-01-01

    Dissolved organic matter and dissolved inorganic chemical species in anoxic pore water from Mangrove Lake, Bermuda sediments were studied to evaluate the role of pore water in the early diagenesis of organic matter. Dissolved sulphate, titration alkalinity, phosphate, and ammonia concentration versus depth profiles were typical of many nearshore clastic sediments and indicated sulphate reduction in the upper 100 cm of sediment. The dissolved organic matter in the pore water was made up predominantly of large molecules, was concentrated from large quantities of pore water by using ultrafiltration and was extensively tudied by using elemental and stable carbon isotope analysis and high-resolution, solid state 13C nuclear magnetic resonance and infrared spectroscopy. The results indicate that this material has a predominantly polysaccharide-like structure and in addition contains a large amount of oxygen-containing functional groups (e.g., carboxyl groups). The 13C nulcear magnetic resonance spectra of the high-molecular-weight dissolved organic matter resemble those of the organic matter in the surface sediments of Mangrove Lake. We propose that this high-molecular-weight organic matter in pore waters represents the partially degraded, labile organic components of the sedimentary organic matter and that pore waters serve as a conduit for removal of these labile organic components from the sediments. The more refractory components are, thus, selectively preserved in the sediments as humic substances (primarily humin). ?? 1986.

  12. Cutaneous melanoma in solid organ transplant patients.

    PubMed

    Russo, I; Piaserico, S; Belloni-Fortina, A; Alaibac, M

    2014-08-01

    Solid organ transplant patients are at greatly increased risk of developing a wide variety of skin cancers, particularly epithelial skin cancers. On the other hand, it is well known that an intact immune system limits the development of benign melanocytic lesions. The eruptive nevi phenomenon, which we can observe in solid organ transplant recipients, is indicative of the relationship between melanocyte proliferation and immune system. Regression of melanocytic nevi after restoration of complete immune responsiveness is a further clinical example the role of immunosurveillance on melanocyte proliferation. However, melanoma incidence in organ transplant recipients appears only 2-3 folds higher than in general population. To this regard, organ transplant recipients who develop de novo melanomas thicker than 2mm seem to have a significantly worse outcome with a greatly increased risk of dying of metastatic melanoma, whereas those who develop a ≤2 mm thickness melanoma seem to have a prognosis similar to that of the general population. Furthermore, there is no evidence supporting an increased risk of melanoma recurrences after transplant in patients with a history of low-risk melanoma. Melanoma is also one of the most frequent and lethal donor-derived malignancies suggesting that a history of invasive melanoma should be considered an absolute contraindication to donation. The aim of this review is to investigate the relationship between immunosuppression and melanoma and to discuss its clinical implications for the management of transplant-associated melanoma. PMID:25068225

  13. Organic speciation of size-segregated atmospheric particulate matter

    NASA Astrophysics Data System (ADS)

    Tremblay, Raphael

    Particle size and composition are key factors controlling the impacts of particulate matter (PM) on human health and the environment. A comprehensive method to characterize size-segregated PM organic content was developed, and evaluated during two field campaigns. Size-segregated particles were collected using a cascade impactor (Micro-Orifice Uniform Deposit Impactor) and a PM2.5 large volume sampler. A series of alkanes and polycyclic aromatic hydrocarbons (PAHs) were solvent extracted and quantified using a gas chromatograph coupled with a mass spectrometer (GC/MS). Large volume injections were performed using a programmable temperature vaporization (PTV) inlet to lower detection limits. The developed analysis method was evaluated during the 2001 and 2002 Intercomparison Exercise Program on Organic Contaminants in PM2.5 Air Particulate Matter led by the US National Institute of Standards and Technology (NIST). Ambient samples were collected in May 2002 as part of the Tampa Bay Regional Atmospheric Chemistry Experiment (BRACE) in Florida, USA and in July and August 2004 as part of the New England Air Quality Study - Intercontinental Transport and Chemical Transformation (NEAQS - ITCT) in New Hampshire, USA. Morphology of the collected particles was studied using scanning electron microscopy (SEM). Smaller particles (one micrometer or less) appeared to consist of solid cores surrounded by a liquid layer which is consistent with combustion particles and also possibly with particles formed and/or coated by secondary material like sulfate, nitrate and secondary organic aerosols. Source apportionment studies demonstrated the importance of stationary sources on the organic particulate matter observed at these two rural sites. Coal burning and biomass burning were found to be responsible for a large part of the observed PAHs during the field campaigns. Most of the measured PAHs were concentrated in particles smaller than one micrometer and linked to combustion sources

  14. Relating dissolved organic matter fluorescence to functional properties

    NASA Astrophysics Data System (ADS)

    Tipping, E.; Baker, A.; Thacker, S.; Gondar, D.

    2007-12-01

    The fluorescence excitation emission matrix properties of dissolved organic matter from three rivers and one lake in NW England are analysed. Sites are sampled in duplicate and for some sites seasonally to cover variations in dissolved organic matter composition, river flow, and carbon isotopic (13C, 14C) variability. Results are compared to the functional properties of the dissolved organic matter, the functional assays provide quantitative information on light absorption, fluorescence, photochemical fading, pH buffering, copper binding, benzo[a]pyrene binding, hydrophilicity and adsorption to alumina. Fluorescence characterization of the dissolved organic matter samples demonstrates that peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio best differentiate different dissolved organic matter samples. These parameters correspond to dissolved organic matter aromaticity, the ratio of labile to recalcitrant organic matter, and dissolved organic matter molecular weight. Peak C fluorescence emission wavelength, the ratio of peak T to peak C fluorescence intensity, and the fluorescence : absorbance ratio fluorescence parameters also have strong correlations with several of the functional assays, in particular the extinction coefficients, benzo(a)pyrene binding and alumina adsorption, and buffering capacity. In many cases, regression equations with a correlation coefficient >0.9 are obtained, suggesting that dissolved organic matter functional character can be predicted from DOM fluorescence properties. For one site, the relationship between dissolved organic matter source, fluorescence, function and carbon isotopic composition is discussed.

  15. Magnetoelectric effect in organic molecular solids

    PubMed Central

    Naka, Makoto; Ishihara, Sumio

    2016-01-01

    The Magnetoelectric (ME) effect in solids is a prominent cross correlation phenomenon, in which the electric field (E) controls the magnetization (M) and the magnetic field (H) controls the electric polarization (P). A rich variety of ME effects and their potential in practical applications have been investigated so far within the transition-metal compounds. Here, we report a possible way to realize the ME effect in organic molecular solids, in which two molecules build a dimer unit aligned on a lattice site. The linear ME effect is predicted in a long-range ordered state of spins and electric dipoles, as well as in a disordered state. One key of the ME effect is a hidden ferroic order of the spin-charge composite object. We provide a new guiding principle of the ME effect in materials without transition-metal elements, which may lead to flexible and lightweight multifunctional materials. PMID:26876424

  16. Magnetoelectric effect in organic molecular solids

    NASA Astrophysics Data System (ADS)

    Naka, Makoto; Ishihara, Sumio

    2016-02-01

    The Magnetoelectric (ME) effect in solids is a prominent cross correlation phenomenon, in which the electric field (E) controls the magnetization (M) and the magnetic field (H) controls the electric polarization (P). A rich variety of ME effects and their potential in practical applications have been investigated so far within the transition-metal compounds. Here, we report a possible way to realize the ME effect in organic molecular solids, in which two molecules build a dimer unit aligned on a lattice site. The linear ME effect is predicted in a long-range ordered state of spins and electric dipoles, as well as in a disordered state. One key of the ME effect is a hidden ferroic order of the spin-charge composite object. We provide a new guiding principle of the ME effect in materials without transition-metal elements, which may lead to flexible and lightweight multifunctional materials.

  17. Magnetoelectric effect in organic molecular solids.

    PubMed

    Naka, Makoto; Ishihara, Sumio

    2016-01-01

    The Magnetoelectric (ME) effect in solids is a prominent cross correlation phenomenon, in which the electric field (E) controls the magnetization (M) and the magnetic field (H) controls the electric polarization (P). A rich variety of ME effects and their potential in practical applications have been investigated so far within the transition-metal compounds. Here, we report a possible way to realize the ME effect in organic molecular solids, in which two molecules build a dimer unit aligned on a lattice site. The linear ME effect is predicted in a long-range ordered state of spins and electric dipoles, as well as in a disordered state. One key of the ME effect is a hidden ferroic order of the spin-charge composite object. We provide a new guiding principle of the ME effect in materials without transition-metal elements, which may lead to flexible and lightweight multifunctional materials. PMID:26876424

  18. Psychosocial Challenges in Solid Organ Transplantation.

    PubMed

    Kuntz, Kristin; Weinland, Stephan R; Butt, Zeeshan

    2015-09-01

    Organ transplantation is often a life-saving surgery for individuals with end-stage organ disease. However, for most types of solid organ transplant, the demand for organs outweighs the supply, resulting in the need to institute a waiting list for suitable patients who cannot immediately receive an organ. Individuals who need transplants must undergo an assessment process that includes medical, surgical, and psychosocial evaluations. The transplant psychosocial evaluation considers whether surgical candidates are able and willing to care for the transplanted organ for many years. The evaluation must also consider a number of psychosocial risk factors that can lead to complications, which may cause premature loss of the graft. Some of these risk factors include a history of poor medical adherence, psychopathology (including substance use disorders), poor social support, and cognitive dysfunction. This article briefly summarizes the assessment of each of these risk factors and how they can be mitigated to ensure the best outcomes for patients and their families. PMID:26370201

  19. Bloodstream infections after solid-organ transplantation.

    PubMed

    Kritikos, Antonios; Manuel, Oriol

    2016-04-01

    Solid-organ transplantation (SOT) has become the preferred strategy to treat a number of end-stage organ disease, because a continuous improvement in survival and quality of life. While preventive strategies has decreased the risk for classical opportunistic infections (such as viral, fungal and parasite infections), bacterial infections, and particularly bloodstream infections (BSIs) remain the most common and life-threatening complications in SOT recipients. The source of BSI after transplant depends on the type of transplantation, being urinary tract infection, pneumonia, and intraabdominal infections the most common infections occurring after kidney, lung and liver transplantation, respectively. The risk for candidemia is higher in abdominal-organ than in thoracic-organ transplantation. Currently, the increasing prevalence of multi-drug resistant (MDR) Gram-negative pathogens, such as extended-spectrum betalactamase-producing Enterobacteriaciae and carbapenem-resistant Klebsiella pneumoniae, is causing particular concerns in SOT recipients, a population which presents several risk factors for developing infections due to MDR organisms. The application of strict preventive policies to reduce the incidence of post transplant BSIs and to control the spread of MDR organisms, including the implementation of specific stewardship programs to avoid the overuse of antibiotics and antifungal drugs, are essential steps to reduce the impact of post transplant infections on allograft and patient outcomes. PMID:26766415

  20. Potential Marine Organisms Affecting Airborne Primary Organic Matter

    NASA Astrophysics Data System (ADS)

    Aller, J. Y.; Alpert, P. A.; Knopf, D. A.

    2012-12-01

    The oceans cover 70% of earth with the marine environment contributing ~50% of the global biomass. Particularly during periods of high biological activity associated with phytoplankton blooms, primary emitted aerosol particles dominated by organic compounds in the submicron size range, are ejected from surface waters increasing in concentration exponentially with overlying wind speeds. This is significant for clouds and climate particularly over nutrient rich polar seas, where seawater concentrations of biogenic particles can reach 109 cells per ml during spring phytoplankton blooms, and even 106 cells per ml in winter when empty frustules and fragments of diatoms are resuspensed from shallow shelf sediments by strong winds, and mix with living pico- and nanoplankton in surface sea waters. This organic aerosol fraction can have a significant impact on the ability of ocean derived aerosol to act as cloud condensation nuclei. It has been shown that small insoluble organic particles are aerosolized from the sea surface microlayer (SML) via bubble bursting. The exact composition and complexity of the SML varies spatially and temporally but includes phytoplankton cells, microorganisms, organic debris, and a complex mixture of proteins, polysaccharides, humic-type material and waxes, microgels and colloidal nanogels, and strong surface active lipids. The specific chemical composition is dependent on the fractionation of organic matter which originates from in-situ production, from underlying water and even from atmospheric deposition. These conditions will most likely determine the nature of the organic and biogenic material. Here we review the types, sizes, and properties of ocean-derived particles and organic material which present potential candidates for airborne biogenic and organic particles.

  1. Factors Affecting Morbidity in Solid Organ Injuries

    PubMed Central

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15–78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in

  2. Factors Affecting Morbidity in Solid Organ Injuries.

    PubMed

    Baygeldi, Serdar; Karakose, Oktay; Özcelik, Kazım Caglar; Pülat, Hüseyin; Damar, Sedat; Eken, Hüseyin; Zihni, İsmail; Çalta, Alpaslan Fedai; Baç, Bilsel

    2016-01-01

    Background and Aim. The aim of this study was to investigate the effects of demographic characteristics, biochemical parameters, amount of blood transfusion, and trauma scores on morbidity in patients with solid organ injury following trauma. Material and Method. One hundred nine patients with solid organ injury due to abdominal trauma during January 2005 and October 2015 were examined retrospectively in the General Surgery Department of Dicle University Medical Faculty. Patients' age, gender, trauma interval time, vital status (heart rate, arterial tension, and respiratory rate), hematocrit (HCT) value, serum area aminotransferase (ALT) and aspartate aminotransferase (AST) values, presence of free abdominal fluid in USG, trauma mechanism, extra-abdominal system injuries, injured solid organs and their number, degree of injury in abdominal CT, number of blood transfusions, duration of hospital stay, time of operation (for those undergoing operation), trauma scores (ISS, RTS, Glasgow coma scale, and TRISS), and causes of morbidity and mortality were examined. In posttraumatic follow-up period, intra-abdominal hematoma infection, emboli, catheter infection, and deep vein thrombosis were monitored as factors of morbidity. Results. One hundred nine patients were followed up and treated due to isolated solid organ injury following abdominal trauma. There were 81 males (74.3%) and 28 females (25.7%), and the mean age was 37.6 ± 18.28 (15-78) years. When examining the mechanism of abdominal trauma in patients, the following results were obtained: 58 (53.3%) traffic accidents (22 out-vehicle and 36 in-vehicle), 27 (24.7%) falling from a height, 14 (12.9%) assaults, 5 (4.5%) sharp object injuries, and 5 (4.5%) gunshot injuries. When evaluating 69 liver injuries scaled by CT the following was detected: 14 (20.3%) of grade I, 32 (46.4%) of grade II, 22 (31.8%) of grade III, and 1 (1.5%) of grade IV. In 63 spleen injuries scaled by CT the following was present: grade I in 21

  3. Maturation of organic matter during experimental simulation of carbonate diagenesis

    SciTech Connect

    Ferguson, J.; Bush, P.R.; Clarke, B.A. )

    1989-09-01

    An earlier investigation involving the simulation of the early stages of diagenesis of carbonate ooids has been extended to include skeletal carbonates and carbonate mud. The experiments, lasting up to 70 days at elevated hydrostatic pressure and temperatures of 180{degree}-210{degree}C, used natural sea water and recent calcitic and aragonitic carbonate materials collected from Florida Bay and the Bahamas. The results give insight into the processes of maturation and diagenesis of the organic and inorganic fractions. Analysis of the organic fraction, both before and after the experiments, gives indicates of possible pathways of maturation during early diagenesis. A small amount of data is also available on the fate of sugars and amino acids in the system. Overall, the experiments closely approximate the natural system. Reactions occurring in the inorganic components are closely allied to those in the organic fraction. Indeed, two of the critical factors in early carbonate diagenesis are the amount and quality of organic matter and the shape, size, and nature of the carbonate grains. Changes in the carbonate fraction taking place during and after the experiments have been deduced by monitoring the pore fluid chemistry and by analyzing the final solid product. These results are discussed briefly and related to changes in the organic phase.

  4. The effects of organic matter-mineral interactions and organic matter chemistry on diuron sorption across a diverse range of soils.

    PubMed

    Smernik, Ronald J; Kookana, Rai S

    2015-01-01

    Sorption of non-ionic organic compounds to soil is usually expressed as the carbon-normalized partition coefficient (KOC), because it is assumed that the main factor that influences the amount sorbed is the organic carbon content of the soil. However, KOC can vary by a factor of at least ten across a range of soils. We investigated two potential causes of variation in diuron KOC - organic matter-mineral interactions and organic matter chemistry - for a diverse set of 34 soils from Sri Lanka, representing a wide range of soil types. Treatment with hydrofluoric acid (HF-treatment) was used to concentrate soil organic matter. HF-treatment increased KOC for the majority of soils (average factor 2.4). We attribute this increase to the blocking of organic matter sorption sites in the whole soils by minerals. There was no significant correlation between KOC for the whole soils and KOC for the HF-treated soils, indicating that the importance of organic matter-mineral interactions varied greatly amongst these soils. There was as much variation in KOC across the HF-treated soils as there was across the whole soils, indicating that the nature of soil organic matter is also an important contributor to KOC variability. Organic matter chemistry, determined by solid-state (13)C nuclear magnetic resonance (NMR) spectroscopy, was correlated with KOC for the HF-treated soils. In particular, KOC increased with the aromatic C content (R=0.64, p=1×10(-6)), and decreased with O-alkyl C (R=-0.32, p=0.03) and alkyl C (R=-0.41, p=0.004) content. PMID:24972176

  5. Solid-phase fluorescence spectroscopy to characterize organic wastes.

    PubMed

    Muller, Mathieu; Milori, Débora Marcondes Bastos Pereira; Déléris, Stéphane; Steyer, Jean-Philippe; Dudal, Yves

    2011-01-01

    The production of solid organic waste (SOW) such as sewage sludge (SS) or municipal solid waste (MSW) has been continuously increasing in Europe since the beginning of the 1990'. Today, the European Union encourages the stabilization of these wastes using biologic processes such as anaerobic digestion and/or composting to produce bio-energy and organic fertilizers. However, the design and management of such biologic processes require knowledge about the quantity and quality of the organic matter (OM) contained in the SOW. The current methods to characterize SOW are tedious, time-consuming and often insufficiently informative. In this paper, we assess the potential of solid-phase fluorescence (SPF) spectroscopy to quickly provide a relevant characterization of SOW. First, we tested well known model compounds (tryptophan, bovine serum albumin, lignin and humic acid) and biologic matrix (Escherichia coli) in three dimensional solid-phase fluorescence (3D-SPF) spectroscopy. We recorded fluorescence spectra from proteinaceous samples but we could not record the fluorescence emitted by lignin and humic acid powders. For SOW samples, fluorescence spectra were successfully recorded for MSW and most of its sub-components (foods, cardboard) but impossible for SS, sludge compost (SC) and ligno-cellulosic wastes. Based on visual observations and additional assays, we concluded that the presence of highly light-absorptive chemical structures in such dark-colored samples was responsible for this limitation. For such samples, i.e. lignin, humic acid, SS, SC and ligno-cellulosic wastes, we show that laser induced fluorescence (LIF) spectroscopy enables the acquisition of 2D fluorescence spectra. PMID:21696938

  6. Kinetic quantification of vertical solid matter transfers in soils by a multi-tracers approach

    NASA Astrophysics Data System (ADS)

    Jagercikova, Mariannaa; Cornu, Sophiea; Bourl`es, Didierb; Evrard, Olivierc; Alainb, V.'eron; Hatt'e, Christinec; Ayrault, Sophiec; Jérômea, Balesdent

    2015-04-01

    We will present a novel multi-tracers method - combining different isotopic systems (137 Cs, 210 Pb (xs), meteoric 10 Be, 206/207 Pb, δ13 C, 14 C) with numerical modeling based on a non-linear diffusion-convection equation with depth dependent parameters - to quantify vertical transfer of solid matter in Luvisols, namely clay translocation and bioturbation. Our results show that as much as 91 ± 9 % and 80 ± 9 % of 137Cs and 10Be, respectively, are associated with the clay size fraction (0-2 µm) and provide therefore relevant tracers to investigate vertical transfer of solid matter in soils with pH > 5 and low organic carbon contents. Lead partitioning between different solid phases is more complex. Considering two spatial distributions of isotopes (macropores or soil matrix) depending on the contribution of a fraction inherited from the loess parent material to the soil concentration, we built up a multi-tracers modeling approach that simulates the experimental data with the common set of transfer parameters and allows us to quantify the relative contributions of vertical solid matter transfers to present-day 0-2 µm vertical distributions. Clay translocation is responsible for 9 to 66 % of clay accumulation in the Bt-horizon. The diffusion coefficients quantifying the rate of soil mixing by bioturbation yields values that are significantly higher than those estimated in previous ecological studies. Modeling the kinetics of solid matter transfer at various spatial and temporal scales should become a reference method in modern pedogenic and critical zone studies.

  7. Is organic matter found in glaciers similar to soil organic matter? A detailed molecular-level investigation of organic matter found in cryoconite holes on the Athabasca Glacier

    NASA Astrophysics Data System (ADS)

    Simpson, M. J.; Xu, Y.; Eyles, N.; Simpson, A. J.; Baer, A.

    2009-04-01

    Cryoconite is a dark-coloured, dust-like material found on the surfaces of glaciers. Cryoconite has received much interest recently because cryoconite holes, which are produced by accelerated ice melt, act as habitats for microbes on glacier surfaces and accelerate ice melt. To the best of our knowledge, cyroconite organic matter (COM) has not yet been chemically characterized at the molecular level. In this study, organic matter biomarkers and a host of Nuclear Magnetic Resonance (NMR) techniques were used to characterize COM from the Athabasca Glacier in the Canadian Rocky Mountains. The research questions that were targeted by this study include: 1) what are the sources of COM on the Athabasca Glacier; 2) are there any biomarker and/or NMR evidence for microbial community activity in the cryoconite holes; and 3) is the COM structurally similar to terrestrial OM? Solvent extracts contained large quantities of fatty acids, n-alkanols, n-alkanes, wax esters and sterols. A large contribution of C23, C25 and C27 relative to C29 and C31 n-alkanes suggests that allochthonous COM is mainly from lower order plants (mosses, lichens). This is confirmed by the absence of lignin phenols (after copper (II) oxidation) in extracts and NMR analyses of COM. Solution-state 1H NMR reveals prominent signals from microbial components, while solid-state 13C Cross Polarization Magic Angle Spinning NMR analysis shows an atypically high alkyl/O-alkyl ratio, suggesting that COM is unique compared to organic matter found in nearby soils. The NMR results suggest that COM is dominated by microbial-derived compounds which were confirmed by phospholipid fatty acid analysis, which showed a significant microbial contribution, primarily from bacteria and minor microeukaryotes. Both biomarker and NMR data suggest that COM likely supports active microbial communities on the Athabasca Glacier and that COM composition is uniquely different than that found in terrestrial environments. Our data

  8. Infections in solid-organ transplant recipients.

    PubMed Central

    Patel, R; Paya, C V

    1997-01-01

    Solid-organ transplantation is a therapeutic option for many human diseases. Infections are a major complication of solid-organ transplantation. All candidates should undergo a thorough infectious-disease screening prior to transplantation. There are three time frames, influenced by surgical factors, the level of immunosuppression, and environmental exposures, during which infections of specific types most frequently occur posttransplantation. Most infections during the first month are related to surgical complications. Opportunistic infections typically occur from the second to the sixth month. During the late posttransplant period (beyond 6 months), transplantation recipients suffer from the same infections seen in the general community. Opportunistic bacterial infections seen in transplant recipients include those caused by Legionella spp., Nocardia spp., Salmonella spp., and Listeria monocytogenes. Cytomegalovirus is the most common cause of viral infections. Herpes simplex virus, varicella-zoster virus, Epstein-Barr virus and others are also significant pathogens. Fungal infections, caused by both yeasts and mycelial fungi, are associated with the highest mortality rates. Mycobacterial, pneumocystis, and parasitic diseases may also occur. PMID:8993860

  9. Measuring Organic Matter with COSIMA on Board Rosetta

    NASA Astrophysics Data System (ADS)

    Briois, C.; Baklouti, D.; Bardyn, A.; Cottin, H.; Engrand, C.; Fischer, H.; Fray, N.; Godard, M.; Hilchenbach, M.; von Hoerner, H.; Höfner, H.; Hornung, K.; Kissel, J.; Langevin, Y.; Le Roy, L.; Lehto, H.; Lehto, K.; Orthous-Daunay, F. R.; Revillet, C.; Rynö, J.; Schulz, R.; Silen, J. V.; Siljeström, S.; Thirkell, L.

    2014-12-01

    Comets are believed to contain the most pristine material of our Solar System materials and therefore to be a key to understand the origin of the Solar System, and the origin of life. Remote sensing observations have led to the detection of more than twenty simple organic molecules (Bockelée-Morvan et al., 2004; Mumma and Charnley, 2011). Experiments on-board in-situ exploration missions Giotto and Vega and the recent Stardust sample return missions have shown that a significant fraction of the cometary grains consists of organic matter. Spectra showed that both the gaseous (Mitchell et al., 1992) and the solid phase (grains) (Kissel and Krueger, 1987) contained organic molecules with higher masses than those of the molecules detected by remote sensing techniques in the gaseous phase. Some of the grains analyzed in the atmosphere of comet 1P/Halley seem to be essentially made of a mixture of carbon, hydrogen, oxygen and nitrogen (CHON grains, Fomenkova, 1999). Rosetta is an unparalleled opportunity to make a real breakthrough into the nature of cometary matter, both in the gas and in the solid phase. The dust mass spectrometer COSIMA on Rosetta will analyze organic and inorganic phases in the dust. The organic phases may be refractory, but some organics may evaporate with time from the dust and lead to an extended source in the coma. Over the last years, we have prepared the cometary rendezvous by the analysis of various samples with the reference model of COSIMA. We will report on this calibration data set and on the first results of the in-situ analysis of cometary grains as captured, imaged and analyzed by COSIMA. References : Bockelée-Morvan, D., et al. 2004. (Eds.), Comets II. the University of Arizona Press, Tucson, USA, pp. 391-423 ; Fomenkova, M.N., 1999. Space Science Reviews 90, 109-114 ; Kissel, J., Krueger, F.R., 1987. Nature 326, 755-760 ; Mitchell, et al. 1992. Icarus 98, 125-133 ; Mumma, M.J., Charnley, S.B., 2011. Annual Review of Astronomy and

  10. Organic matter and containment of uranium and fissiogenic isotopes at the Oklo natural reactors

    USGS Publications Warehouse

    Nagy, B.; Gauthier-Lafaye, F.; Holliger, P.; Davis, D.W.; Mossman, D.J.; Leventhal, J.S.; Rigali, M.J.; Parnell, J.

    1991-01-01

    SOME of the Precambrian natural fission reactors at Oklo in Gabon contain abundant organic matter1,2, part of which was liquefied at the time of criticality and subsequently converted to a graphitic solid3,4. The liquid organic matter helps to reduce U(VI) to U(IV) from aqueous solutions, resulting in the precipitation of uraninite5. It is known that in the prevailing reactor environments, precipitated uraninite grains incorporated fission products. We report here observations which show that these uraninite crystals were held immobile within the resolidified, graphitic bitumen. Unlike water-soluble (humic) organic matter, the graphitic bituminous organics at Oklo thus enhanced radionu-clide containment. Uraninite encased in solid graphitic matter in the organic-rich reactor zones lost virtually no fissiogenic lan-thanide isotopes. The first major episode of uranium and lead migration was caused by the intrusion of a swarm of adjacent dolerite dykes about 1,100 Myr after the reactors went critical. Our results from Oklo imply that the use of organic, hydrophobic solids such as graphitic bitumen as a means of immobilizing radionuclides in pretreated nuclear waste warrants further investigation. ?? 1991 Nature Publishing Group.

  11. Sensitivity of soil organic matter in anthropogenically disturbed organic soils

    NASA Astrophysics Data System (ADS)

    Säurich, Annelie; Tiemeyer, Bärbel; Bechtold, Michel; Don, Axel; Freibauer, Annette

    2016-04-01

    Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. However, the variability of CO2 emissions increases with disturbance, and little is known on the soil properties causing differences between seemingly similar sites. Furthermore the driving factors for carbon cycling are well studied for both genuine peat and mineral soil, but there is a lack of information concerning soils at the boundary between organic and mineral soils. Examples for such soils are both soils naturally relatively high in soil organic matter (SOM) such as Humic Gleysols and former peat soils with a relative low SOM content due to intensive mineralization or mixing with underlying or applied mineral soil. The study aims to identify drivers for the sensitivity of soil organic matter and therefore for respiration rates of anthropogenically disturbed organic soils, especially those near the boundary to mineral soils. Furthermore, we would like to answer the question whether there are any critical thresholds of soil organic carbon (SOC) concentrations beyond which the carbon-specific respiration rates change. The German agricultural soil inventory samples all agricultural soils in Germany in an 8x8 km² grid following standardized protocols. From this data and sample base, we selected 120 different soil samples from more than 80 sites. As reference sites, three anthropogenically undisturbed peatlands were sampled as well. We chose samples from the soil inventory a) 72 g kg-1 SOC and b) representing the whole range of basic soil properties: SOC (72 to 568 g kg-1), total nitrogen (2 to 29 g kg-1), C-N-ratio (10 to 80) bulk density (0.06 to 1.41 g/cm³), pH (2.5 to 7.4), sand (0 to 95 %) and clay (2 to 70 %) content (only determined for samples with less than 190 g kg-1 SOC) as well as the botanical origin of the peat (if determinable). Additionally, iron oxides were determined for all samples. All samples were sieved (2 mm) and incubated at standardized water content and

  12. Influence of Dissolved Organic Matter and Fe (II) on the Abiotic Reduction of Pentachloronitrobenzene

    EPA Science Inventory

    Nitroaromatic pesticides (NAPs) are hydrophobic contaminants that can accumulate in sediments by the deposition of suspended solids from surface waters. Fe(II) and dissolved organic matter (DOM), present in suboxic and anoxic zones of freshwater sediments, can transform NAPs in n...

  13. Soil Organic Matter and Management of Plant-Parasitic Nematodes

    PubMed Central

    Widmer, T. L.; Mitkowski, N. A.; Abawi, G. S.

    2002-01-01

    Organic matter and its replenishment has become a major component of soil health management programs. Many of the soil's physical, chemical, and biological properties are a function of organic matter content and quality. Adding organic matter to soil influences diverse and important biological activities. The diversity and number of free-living and plant-parasitic nematodes are altered by rotational crops, cover crops, green manures, and other sources of organic matter. Soil management programs should include the use of the proper organic materials to improve soil chemical, physical, and biological parameters and to suppress plant-parasitic nematodes and soilborne pathogens. It is critical to monitor the effects of organic matter additions on activities of major and minor plant-parasitic nematodes in the production system. This paper presents a general review of information in the literature on the effects of crop rotation, cover crops, and green manures on nematodes and their damage to economic crops. PMID:19265946

  14. Soil organic matter and management of plant-parasitic nematodes.

    PubMed

    Widmer, T L; Mitkowski, N A; Abawi, G S

    2002-12-01

    Organic matter and its replenishment has become a major component of soil health management programs. Many of the soil's physical, chemical, and biological properties are a function of organic matter content and quality. Adding organic matter to soil influences diverse and important biological activities. The diversity and number of free-living and plant-parasitic nematodes are altered by rotational crops, cover crops, green manures, and other sources of organic matter. Soil management programs should include the use of the proper organic materials to improve soil chemical, physical, and biological parameters and to suppress plant-parasitic nematodes and soilborne pathogens. It is critical to monitor the effects of organic matter additions on activities of major and minor plant-parasitic nematodes in the production system. This paper presents a general review of information in the literature on the effects of crop rotation, cover crops, and green manures on nematodes and their damage to economic crops. PMID:19265946

  15. Aerobic methane production from organic matter

    NASA Astrophysics Data System (ADS)

    Vigano, I.

    2010-01-01

    Methane, together with H2O, CO2 and N2O, is an important greenhouse gas in th e Earth’s atmosphere playing a key role in the radiative budget. It has be en known for decades that the production of the reduced compound CH4 is possible almost exclusively in anoxic environments per opera of one of the most importan t class of microorganisms which form the Archaea reign. Methane can be produced also from incomplete combustion of organic material. The generation of CH4 in an oxygenated environment under near-ambient conditions is a new discovery made in 2006 by Keppler et. al where surprisingly they measured emissions of this green house gas from plants incubated in chambers with air containing 20% of oxygen. A lthough the estimates on a global scale are still object of an intensive debate, the results presented in this thesis clearly show the existence of methane prod uction under oxic conditions for non living plant material. Temperature and UV l ight are key factors that drive the generation of CH4 from plant matter in a wel l oxygenated environment.

  16. The evolution of organic matter in space.

    PubMed

    Ehrenfreund, Pascale; Spaans, Marco; Holm, Nils G

    2011-02-13

    Carbon, and molecules made from it, have already been observed in the early Universe. During cosmic time, many galaxies undergo intense periods of star formation, during which heavy elements like carbon, oxygen, nitrogen, silicon and iron are produced. Also, many complex molecules, from carbon monoxide to polycyclic aromatic hydrocarbons, are detected in these systems, like they are for our own Galaxy. Interstellar molecular clouds and circumstellar envelopes are factories of complex molecular synthesis. A surprisingly high number of molecules that are used in contemporary biochemistry on the Earth are found in the interstellar medium, planetary atmospheres and surfaces, comets, asteroids and meteorites and interplanetary dust particles. Large quantities of extra-terrestrial material were delivered via comets and asteroids to young planetary surfaces during the heavy bombardment phase. Monitoring the formation and evolution of organic matter in space is crucial in order to determine the prebiotic reservoirs available to the early Earth. It is equally important to reveal abiotic routes to prebiotic molecules in the Earth environments. Materials from both carbon sources (extra-terrestrial and endogenous) may have contributed to biochemical pathways on the Earth leading to life's origin. The research avenues discussed also guide us to extend our knowledge to other habitable worlds. PMID:21220279

  17. Role of organic matter in the Proterozoic Oklo natural fission reactors, Gabon, Africa

    SciTech Connect

    Nagy, B.; Rigali, M.J.; Gauthier-Lafaye, F.; Holliger, P.; Mossman, D.J.; Leventhal, J.S.

    1993-07-01

    Of the sixteen known Oklo and the Bangombe natural fission reactors (hydrothermally altered elastic sedimentary rocks that contain abundant uraninite and authigenic clay minerals), reactors 1 to 6 at Oklo contain only traces of organic matter, but the others are rich in organic substances. Reactors 7 to 9 are the subjects of this study. These organic-rich reactors may serve as time-tested analogues for anthropogenic nuclear-waste containment strategies. Organic matter helped to concentrate quantities of uranium sufficient to initiate the nuclear chain reactions. Liquid bitumen was generated from organic matter by hydrothermal reactions during nuclear criticality. The bitumen soon became a solid, consisting of polycyclic aromatic hydrocarbons and an intimate mixture of cryptocrystalline graphite, which enclosed and immobilized uraninite and the fission-generated isotopes entrapped in uraninite. This mechanism prevented major loss of uranium and fission products from the natural nuclear reactors for 1.2 b.y. 24 refs., 4 figs.

  18. Transplantation immunology: Solid Organ and bone marrow

    PubMed Central

    Chinen, Javier; Buckley, Rebecca H.

    2010-01-01

    Development of the field of organ and tissue transplantation has accelerated remarkably since the human major histocompatibility complex (MHC) was discovered in 1967. Matching of donor and recipient for MHC antigens has been shown to have a significant positive effect on graft acceptance. The roles of the different components of the immune system involved in the tolerance or rejection of grafts and in graft-versus-host disease have been clarified. These components include: antibodies, antigen presenting cells, helper and cytotoxic T cell subsets, immune cell surface molecules, signaling mechanisms and cytokines that they release. The development of pharmacologic and biological agents that interfere with the alloimmune response and graft rejection has had a crucial role in the success of organ transplantation. Combinations of these agents work synergistically, leading to lower doses of immunosuppressive drugs and reduced toxicity. Reports of significant numbers of successful solid organ transplants include those of the kidneys, liver, heart and lung. The use of bone marrow transplantation for hematological diseases, particularly hematological malignancies and primary immunodeficiencies, has become the treatment of choice in many of these conditions. Other sources of hematopoietic stem cells are also being used, and diverse immunosuppressive drug regimens of reduced intensity are being proposed to circumvent the mortality associated with the toxicity of these drugs. Gene therapy to correct inherited diseases by infusion of gene-modified autologous hematopoietic stem cells has shown efficacy in two forms of severe combined immunodeficiency, providing an alternative to allogeneic tissue transplantation. PMID:20176267

  19. TILLAGE AND RESIDUE MANAGEMENT EFFECTS ON SOIL ORGANIC MATTER

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This college-level textbook is designed to help students and researchers understand the complexity of how to manage soil organic matter in a diversity of agroecosystems. This chapter describes the current state of knowledge on how tillage and residue management affect soil organic matter. Types of t...

  20. Complexation of trace metals by adsorbed natural organic matter

    USGS Publications Warehouse

    Davis, J.A.

    1984-01-01

    The adsorption behavior and solution speciation of Cu(II) and Cd(II) were studied in model systems containing colloidal alumina particles and dissolved natural organic matter. At equilibrium a significant fraction of the alumina surface was covered by adsorbed organic matter. Cu(II) was partitioned primarily between the surface-bound organic matter and dissolved Cu-organic complexes in the aqueous phase. Complexation of Cu2+ with the functional groups of adsorbed organic matter was stronger than complexation with uncovered alumina surface hydroxyls. It is shown that the complexation of Cu(II) by adsorbed organic matter can be described by an apparent stability constant approximately equal to the value found for solution phase equilibria. In contrast, Cd(II) adsorption was not significantly affected by the presence of organic matter at the surface, due to weak complex formation with the organic ligands. The results demonstrate that general models of trace element partitioning in natural waters must consider the presence of adsorbed organic matter. ?? 1984.

  1. Detection of organic matter in interstellar grains.

    PubMed

    Pendleton, Y J

    1997-06-01

    Star formation and the subsequent evolution of planetary systems occurs in dense molecular clouds, which are comprised, in part, of interstellar dust grains gathered from the diffuse interstellar medium (DISM). Radio observations of the interstellar medium reveal the presence of organic molecules in the gas phase and infrared observational studies provide details concerning the solid-state features in dust grains. In particular, a series of absorption bands have been observed near 3.4 microns (approximately 2940 cm-1) towards bright infrared objects which are seen through large column densities of interstellar dust. Comparisons of organic residues, produced under a variety of laboratory conditions, to the diffuse interstellar medium observations have shown that aliphatic hydrocarbon grains are responsible for the spectral absorption features observed near 3.4 microns (approximately 2940 cm-1). These hydrocarbons appear to carry the -CH2- and -CH3 functional groups in the abundance ratio CH2/CH3 approximately 2.5, and the amount of carbon tied up in this component is greater than 4% of the cosmic carbon available. On a galactic scale, the strength of the 3.4 microns band does not scale linearly with visual extinction, but instead increases more rapidly for objects near the Galactic Center. A similar trend is noted in the strength of the Si-O absorption band near 9.7 microns. The similar behavior of the C-H and Si-O stretching bands suggests that these two components may be coupled, perhaps in the form of grains with silicate cores and refractory organic mantles. The ubiquity of the hydrocarbon features seen in the near infrared near 3.4 microns throughout out Galaxy and in other galaxies demonstrates the widespread availability of such material for incorporation into the many newly forming planetary systems. The similarity of the 3.4 microns features in any organic material with aliphatic hydrocarbons underscores the need for complete astronomical observational

  2. Active viscoelastic matter: from bacterial drag reduction to turbulent solids.

    PubMed

    Hemingway, E J; Maitra, A; Banerjee, S; Marchetti, M C; Ramaswamy, S; Fielding, S M; Cates, M E

    2015-03-01

    A paradigm for internally driven matter is the active nematic liquid crystal, whereby the equations of a conventional nematic are supplemented by a minimal active stress that violates time-reversal symmetry. In practice, active fluids may have not only liquid-crystalline but also viscoelastic polymer degrees of freedom. Here we explore the resulting interplay by coupling an active nematic to a minimal model of polymer rheology. We find that adding a polymer can greatly increase the complexity of spontaneous flow, but can also have calming effects, thereby increasing the net throughput of spontaneous flow along a pipe (a "drag-reduction" effect). Remarkably, active turbulence can also arise after switching on activity in a sufficiently soft elastomeric solid. PMID:25793858

  3. Subcritical water extraction of organic matter from sedimentary rocks.

    PubMed

    Luong, Duy; Sephton, Mark A; Watson, Jonathan S

    2015-06-16

    Subcritical water extraction of organic matter containing sedimentary rocks at 300°C and 1500 psi produces extracts comparable to conventional solvent extraction. Subcritical water extraction of previously solvent extracted samples confirms that high molecular weight organic matter (kerogen) degradation is not occurring and that only low molecular weight organic matter (free compounds) are being accessed in analogy to solvent extraction procedures. The sedimentary rocks chosen for extraction span the classic geochemical organic matter types. A type I organic matter-containing sedimentary rock produces n-alkanes and isoprenoidal hydrocarbons at 300°C and 1500 psi that indicate an algal source for the organic matter. Extraction of a rock containing type II organic matter at the same temperature and pressure produces aliphatic hydrocarbons but also aromatic compounds reflecting the increased contributions from terrestrial organic matter in this sample. A type III organic matter-containing sample produces a range of non-polar and polar compounds including polycyclic aromatic hydrocarbons and oxygenated aromatic compounds at 300°C and 1500 psi reflecting a dominantly terrestrial origin for the organic materials. Although extraction at 300°C and 1500 psi produces extracts that are comparable to solvent extraction, lower temperature steps display differences related to organic solubility. The type I organic matter produces no products below 300°C and 1500 psi, reflecting its dominantly aliphatic character, while type II and type III organic matter contribute some polar components to the lower temperature steps, reflecting the chemical heterogeneity of their organic inventory. The separation of polar and non-polar organic compounds by using different temperatures provides the potential for selective extraction that may obviate the need for subsequent preparative chromatography steps. Our results indicate that subcritical water extraction can act as a suitable

  4. Dissolved Organic Matter and Emerging Contaminants in Urban Stream Ecosystems

    NASA Astrophysics Data System (ADS)

    Kaushal, S. S.; Findlay, S.; Groffman, P.; Belt, K.; Delaney, K.; Sides, A.; Walbridge, M.; Mayer, P.

    2009-05-01

    We investigated the effects of urbanization on the sources, bioavailability and forms of natural and anthropogenic organic matter found in streams located in Maryland, U.S.A. We found that the abundance, biaoavailability, and enzymatic breakdown of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), and dissolved organic phosphorus (DOP) increased in streams with increasing watershed urbanization suggesting that organic nutrients may represent a growing form of nutrient loading to coastal waters associated with land use change. Organic carbon, nitrogen, and phosphorus in urban streams were elevated several-fold compared to forest and agricultural streams. Enzymatic activities of stream microbes in organic matter decomposition were also significantly altered across watershed land use. Chemical characterization suggested that organic matter in urban streams originated from a variety of sources including terrestrial, sewage, and in-stream transformation. In addition, a characterization of emerging organic contaminants (polyaromatic cyclic hydrocarbons, organochlorine pesticides, and polybrominated diphenyl ether flame retardents), showed that organic contaminants and dissolved organic matter increase with watershed urbanization and fluctuate substantially with changing climatic conditions. Elucidating the emerging influence of urbanization on sources, transport, and in-stream transformation of organic nutrients and contaminants will be critical in unraveling the changing role of organic matter in urban degraded and restored stream ecosystems.

  5. Sorption of Highly Hydrophobic Organic Chemicals to Organic Matter Relevant for Fish Bioconcentration Studies.

    PubMed

    Böhm, Leonard; Schlechtriem, Christian; Düring, Rolf-Alexander

    2016-08-01

    With regard to a potential underestimation of bioconcentration factors (BCF) in flow-through fish tests, sorption of 11 highly hydrophobic organic chemicals (HOCs) (log KOW 5.5-7.8) from different substance classes was systematically investigated for the first time in the presence of fish feed (FF) and filter residues (FR), the organic matter (OM) most relevant for fish bioconcentration studies. Sorption was investigated in batch-equilibrium experiments by solid-phase microextraction (SPME) resulting in partitioning coefficients of solid-water (Kd), total organic carbon-water (KTOC), and dissolved organic carbon-water (KDOC). Results prove a high affinity of HOCs for FF and FR supporting a significant impact on BCF studies and differing from sorption to Aldrich-humic acid (AHA) utilized as reference sorbent. Sorption is influenced by interactions between HOCs and OM characteristics. For FF, KDOC values were higher than KTOC values. Results help to assess the relevance of interaction of HOCs from different substance classes with OM relevant for BCF studies. PMID:27362743

  6. Solid organ transplant training objectives for residents.

    PubMed

    Masclans, J R; Vicente, R; Ballesteros, M A; Sabater, J; Roca, O; Rello, J

    2012-11-01

    With the aim of analyzing the current state of the educational objectives in the training of medical residents in solid organ transplantation (SOT), we conducted a review of the status of the official programs of the specialities involved in SOT, focusing particularly on lung transplantation. A survey of medical residents was also conducted to allow reflexion about the topic. We obtained 44 surveys from 4 University Hospitals with active programs in SOT, mainly from intensive care medicine and anesthesiology residents. We detected an important number of courses oriented to organ donation but very limited in terms of basic training in the management of the immediate postoperative period, principles of immunosuppression and updates on immunosuppressive therapy and complications (particularly rejection and infection). We also identified that these educational aspects should be directed not only to medical residents from specialities with a close retation to SOT, but also to all who may at some time have a relation to such patients. The use of information and communication techniques (ICTs), on-line courses and also simulations should be instruments to take into account in the biomedical training of medical residents. We conclude that we need a specific training program in complications of SOT, as well as fundamental principles in immunology and immunosuppressor pharmacology. PMID:22980670

  7. Changes in River Organic Matter Through Time.

    NASA Astrophysics Data System (ADS)

    Hudson, N.; Baker, A.; Ward, D.

    2006-12-01

    fluorescence, as an increase in pH was also observed in these samples. This work illustrates the dynamic character of river organic matter within a timescale and under conditions that are representative of the natural system.

  8. Degradation of natural organic matter: A thermodynamic analysis

    NASA Astrophysics Data System (ADS)

    LaRowe, Douglas E.; Van Cappellen, Philippe

    2011-04-01

    The oxidative degradation of organic matter is a key process in the biogeochemical functioning of the earth system. Quantitative models of organic matter degradation are therefore essential for understanding the chemical state and evolution of the Earth's near-surface environment, and to forecast the biogeochemical consequences of ongoing regional and global change. The complex nature of biologically produced organic matter represents a major obstacle to the development of such models, however. Here, we compare the energetics of the oxidative degradation of a large number of naturally occurring organic compounds. By relating the Gibbs energies of half reactions describing the complete mineralization of the compounds to their average nominal carbon oxidation state, it becomes possible to estimate the energetic potential of the compounds based on major element (C, H, N, O, P, S) ratios. The new energetic description of organic matter can be combined with bioenergetic theory to rationalize observed patterns in the decomposition of natural organic matter. For example, the persistence of cell membrane derived compounds and complex organics in anoxic settings is consistent with their limited catabolic potential under these environmental conditions. The proposed approach opens the way to include the thermodynamic properties of organic compounds in kinetic models of organic matter degradation.

  9. Spatial Complexity of Soil Organic Matter Forms at Nanometre Scales

    SciTech Connect

    Lehmann,J.; Solomon, D.; Kinyangi, J.; Dathe, L.; Wirick, S.; Jacobsen, C.

    2008-01-01

    Organic matter in soil has been suggested to be composed of a complex mixture of identifiable biopolymers1 rather than a chemically complex humic material2. Despite the importance of the spatial arrangement of organic matter forms in soil3, its characterization has been hampered by the lack of a method for analysis at fine scales. X-ray spectromicroscopy has enabled the identification of spatial variability of organic matter forms, but was limited to extracted soil particles4 and individual micropores within aggregates5, 6. Here, we use synchrotron-based near-edge X-ray spectromicroscopy7 of thin sections of entire and intact free microaggregates6 to demonstrate that on spatial scales below 50 nm resolution, highly variable yet identifiable organic matter forms, such as plant or microbial biopolymers, can be found in soils at distinct locations of the mineral assemblage. Organic carbon forms detected at this spatial scale had no similarity to organic carbon forms of total soil. In contrast, we find that organic carbon forms of total soil were remarkably similar between soils from several temperate and tropical forests with very distinct vegetation composition and soil mineralogy. Spatial information on soil organic matter forms at the scale provided here could help to identify processes of organic matter cycling in soil, such as carbon stability or sequestration and responses to a changing climate.

  10. Deformation behaviors of peat with influence of organic matter.

    PubMed

    Yang, Min; Liu, Kan

    2016-01-01

    Peat is a kind of special material rich in organic matter. Because of the high content of organic matter, it shows different deformation behaviors from conventional geotechnical materials. Peat grain has a non-negligible compressibility due to the presence of organic matter. Biogas can generate from peat and can be trapped in form of gas bubbles. Considering the natural properties of peat, a special three-phase composition of peat is described which indicates the existence of organic matter and gas bubbles in peat. A stress-strain-time model is proposed for the compression of organic matter, and the surface tension effect is considered in the compression model of gas bubbles. Finally, a mathematical model has been developed to simulate the deformation behavior of peat considering the compressibility of organic matter and entrapped gas bubbles. The deformation process is the coupling of volume variation of organic matter, gas bubbles and water drainage. The proposed model is used to simulate a series of peat laboratory oedometer tests, and the model can well capture the test results with reasonable model parameters. Effects of model parameters on deformation of peat are also analyzed. PMID:27247870

  11. Global Evolution of Solid Matter in Turbulent Protoplanetry Disks. Part 1; Aerodynamics of Solid Particles

    NASA Technical Reports Server (NTRS)

    Stepinski, T. F.; Valageas, P.

    1996-01-01

    The problem of planetary system formation and its subsequent character can only be addressed by studying the global evolution of solid material entrained in gaseous protoplanetary disks. We start to investigate this problem by considering the space-time development of aerodynamic forces that cause solid particles to decouple from the gas. The aim of this work is to demonstrate that only the smallest particles are attached to the gas, or that the radial distribution of the solid matter has no momentary relation to the radial distribution of the gas. We present the illustrative example wherein a gaseous disk of 0.245 solar mass and angular momentum of 5.6 x 10(exp 52) g/sq cm/s is allowed to evolve due to turbulent viscosity characterized by either alpha = 10(exp -2) or alpha = 10(exp -3). The motion of solid particles suspended in a viscously evolving gaseous disk is calculated numerically for particles of different sizes. In addition we calculate the global evolution of single-sized, noncoagulating particles. We find that particles smaller than 0.1 cm move with the gas; larger particles have significant radial velocities relative to the gas. Particles larger than 0.1 cm but smaller than 10(exp 3) cm have inward radial velocities much larger than the gas, whereas particles larger than 10(exp 4) cm have inward velocities much smaller than the gas. A significant difference in the form of the radial distribution of solids and the gas develops with time. It is the radial distribution of solids, rather than the gas, that determines the character of an emerging planetary system.

  12. Effect of organic matters on CO2 hydrate phase equilibrium conditions in Na-montmorillonite clay

    NASA Astrophysics Data System (ADS)

    Park, T.; Kyung, D.; Lee, W.

    2013-12-01

    Formation of gas hydrates provides an attractive idea for storing greenhouse gases in a long-term stable geological formation. Since the phase equilibrium conditions of gas hydrates indicate the stability of hydrates, estimation of the phase equilibrium conditions of gas hydrates in marine geological conditions is necessary. In this study, we have identified the effects of organic matters (glycine, glucose, and urea) and solid surface (montmorillonite (MMT)) on the three-phase (liquid-hydrate-vapor) equilibrium conditions of CO2 hydrate. CO2 phase equilibrium experiments were conducted using 0.5mol% organic matter solutions with and without 10g soil mineral were experimentally conducted. Addition of organic matters shifted the phase equilibrium conditions of CO2 hydrate to the higher pressure or lower pressure region because of higher competition of water molecules due to the dissolved organic matters. Presence of MMT also leaded to the higher equilibrium pressure due to the interaction of cations with water molecules. By addition of organic matters to the clay suspension, the hydrate phase equilibrium conditions were less inhibited compared to those of MMT and organic matters independently. The diminished magnitudes by addition of organic matters to the clay suspension (MMT > MMT+urea > MMT+glycine > MMT+glucose > DIW) were different to the order of inhibition degree without MMT (Glucose > glycine > urea > DIW). X-ray diffraction (XRD), scanning electron microscope (SEM), and ion chromatography (IC) analysis were conducted to support the hypothesis that the organic matters interact with cations in MMT interlayer space, and leads to the less inhibition of phase equilibrium conditions. The present study provides basic information for the formation and dissociation of CO2 hydrates in the geological formation when sequestering CO2 as a form of CO2 hydrate.

  13. Polycyclic aromatic hydrocarbons and organic matter associated to particulate matter emitted from atmospheric fluidized bed coal combustion

    SciTech Connect

    Mastral, A.M.; Callen, M.S.; Garcia, T.

    1999-09-15

    The polycyclic aromatic hydrocarbons (PAH) and the organic matter (OM) content associated with particulate matter (PM) emissions from atmospheric fluidized bed coal combustion have been studied. The two main aims of the work have been (a) to study OM and PAH emissions as a function of the coal fluidized bed combustion (FBC) variables in solid phase and (b) to check if there is any correlation between OM and PAH contained in the PM. The combustion was carried out in a laboratory scale plant at different combustion conditions: temperature, percentage of oxygen excess, and total air flow. PAH associated on the particulate matter have been analyzed by fluorescence spectroscopy in the synchronous mode (FS) after PM extraction by sonication with dimethylformamide (DMF). It can be concluded that there is not a direct relationship between the OM content and the PAH supported in the PM emitted. In addition, neither PM or OM show dependence between themselves.

  14. Geomorphic controls on the amount and quality of organic matter associated with mineral surfaces

    NASA Astrophysics Data System (ADS)

    Berhe, A.; Harden, J. W.; Torn, M. S.; Burton, S. D.; Kleber, M.; Harte, J.

    2005-12-01

    Soil minerals play a critical role in stabilization of organic matter. In eroding slopes and depositional settings, the question of whether and to what extent the processes of soil erosion and deposition constitute a carbon dioxide sink is closely associated with stability of the mineral-organic matter associations. Here we use (a) density fractionation to determine the amount of soil organic carbon (SOC) that is associated with the mineral or heavy fraction (HF); (b) solid state 13C-NMR of bulk vs. mineral associated fraction to determine chemical composition of the organic constituents and (c) amount of crystalline primary, non-crystalline and organically complexed Fe and Al to estimate the soil's overall chemical protective capacity. We found that although around 99% of the soil is composed of HF, the SOC matter associated with it was less than 50% of bulk SOC and this amount increases with decreasing slope (higher in depositional basins). The soil organic matter associated with the HF was found to be more decomposed - as evidenced by the higher Alkyl:O-Alkyl ratio and aromaticity. Moreover, the average inventory of metal ions that promote stabilization of SOC through stable or meta-stable associations of SOC with the HF was found to be at least twice as much in the depositional basins compared to the eroding slopes. This study shows that the amount and quality of organic matter associated with HF changes significantly with topography and associated geomorphic processes such as erosion and deposition.

  15. Role of dissolved organic matter in ice photochemistry.

    PubMed

    Grannas, Amanda M; Pagano, Lisa P; Pierce, Brittany C; Bobby, Rachel; Fede, Alexis

    2014-09-16

    In this study, we provide evidence that dissolved organic matter (DOM) plays an important role in indirect photolysis processes in ice, producing reactive oxygen species (ROS) and leading to the efficient photodegradation of a probe hydrophobic organic pollutant, aldrin. Rates of DOM-mediated aldrin loss are between 2 and 56 times faster in ice than in liquid water (depending on DOM source and concentration), likely due to a freeze-concentration effect that occurs when the water freezes, providing a mechanism to concentrate reactive components into smaller, liquid-like regions within or on the ice. Rates of DOM-mediated aldrin loss are also temperature dependent, with higher rates of loss as temperature decreases. This also illustrates the importance of the freeze-concentration effect in altering reaction kinetics for processes occurring in environmental ices. All DOM source types studied were able to mediate aldrin loss, including commercially available fulvic and humic acids and an authentic Arctic snow DOM sample isolated by solid phase extraction, indicating the ubiquity of DOM in indirect photochemistry in environmental ices. PMID:25157605

  16. Toward an experimental synthesis of the chondritic insoluble organic matter

    NASA Astrophysics Data System (ADS)

    Biron, Kasia; Derenne, Sylvie; Robert, FrançOis; Rouzaud, Jean-NoëL.

    2015-08-01

    Based on the statistical model proposed for the molecular structure of the insoluble organic matter (IOM) isolated from the Murchison meteorite, it was recently proposed that, in the solar T-Tauri disk regions where (photo)dissociation of gaseous molecules takes place, aromatics result from the cyclization/aromatization of short aliphatics. This hypothesis is tested in this study, with n-alkanes being submitted to high-frequency discharge at low pressure. The contamination issue was eliminated using deuterated precursor. IOM was formed and studied using solid-state nuclear magnetic resonance, pyrolysis coupled to gas chromatography and mass spectrometry, RuO4 oxidation, and high-resolution transmission electron microscopy. It exhibits numerous similarities at the molecular level with the hydrocarbon backbone of the natural IOM, reinforcing the idea that the initial precursors of the IOM were originally chains in the gas. Moreover, a fine comparison between the chemical structure of several meteorite IOM suggests either that (i) the meteorite IOMs share a common precursor standing for the synthetic IOM or that (ii) the slight differences between the meteorite IOMs reflect differences in their environment at the time of their formation i.e., related to plasma temperature that, in turn, dictates the dissociation-recombination rates of organic fragments.

  17. Spectral band selection for classification of soil organic matter content

    NASA Technical Reports Server (NTRS)

    Henderson, Tracey L.; Szilagyi, Andrea; Baumgardner, Marion F.; Chen, Chih-Chien Thomas; Landgrebe, David A.

    1989-01-01

    This paper describes the spectral-band-selection (SBS) algorithm of Chen and Landgrebe (1987, 1988, and 1989) and uses the algorithm to classify the organic matter content in the earth's surface soil. The effectiveness of the algorithm was evaluated comparing the results of classification of the soil organic matter using SBS bands with those obtained using Landsat MSS bands and TM bands, showing that the algorithm was successful in finding important spectral bands for classification of organic matter content. Using the calculated bands, the probabilities of correct classification for climate-stratified data were found to range from 0.910 to 0.980.

  18. Interstellar chemistry recorded in organic matter from primitive meteorites.

    PubMed

    Busemann, Henner; Young, Andrea F; Alexander, Conel M O'd; Hoppe, Peter; Mukhopadhyay, Sujoy; Nittler, Larry R

    2006-05-01

    Organic matter in extraterrestrial materials has isotopic anomalies in hydrogen and nitrogen that suggest an origin in the presolar molecular cloud or perhaps in the protoplanetary disk. Interplanetary dust particles are generally regarded as the most primitive solar system matter available, in part because until recently they exhibited the most extreme isotope anomalies. However, we show that hydrogen and nitrogen isotopic compositions in carbonaceous chondrite organic matter reach and even exceed those found in interplanetary dust particles. Hence, both meteorites (originating from the asteroid belt) and interplanetary dust particles (possibly from comets) preserve primitive organics that were a component of the original building blocks of the solar system. PMID:16675696

  19. Pyrogenic organic matter can alter microbial communication

    NASA Astrophysics Data System (ADS)

    Masiello, Caroline; Gao, Xiaodong; Cheng, Hsiao-Ying; Silberg, Jonathan

    2016-04-01

    Soil microbes communicate with each other to manage a large range of processes that occur more efficiently when microbes are able to act simultaneously. This coordination occurs through the continuous production of signaling compounds that are easily diffused into and out of cells. As the number of microbes in a localized environment increases, the internal cellular concentration of these signaling compounds increases, and when a threshold concentration is reached, gene expression shifts, leading to altered (and coordinated) microbial behaviors. Many of these coordinated behaviors have biogeochemically important outcomes. For example, methanogenesis, denitrification, biofilm formation, and the development of plant-rhizobial symbioses are all regulated by a simple class of cell-cell signaling molecules known as acyl homoserine lactones (AHLs). Pyrogenic organic matter in soils can act to disrupt microbial communication through multiple pathways. In the case of AHLs, charcoal's very high surface area can sorb these signaling compounds, preventing microbes from detecting each others' presence (Masiello et al., 2014). In addition, the lactone ring in AHLs is vulnerable to pH increases accompanying PyOM inputs, with soil pH values higher than 7-8 leading to ring opening and compound destabilization. Different microbes use different classes of signaling compounds, and not all microbial signaling compounds are pH-vulnerable. This implies that PyOM-driven pH increases may trigger differential outcomes for Gram negative bacteria vs fungi, for example. A charcoal-driven reduction in microbes' ability to detect cell-cell communication compounds may lead to a shift in the ability of microbes to participate in key steps of C and N cycling. For example, an increase in an archaeon-specific AHL has been shown to lead to a cascade of metabolic processes that eventually results in the upregulation of CH4 production (Zhang et al., 2012). Alterations in similar AHL compounds leads to

  20. Inorganic-organic composite solid polymer electrolytes

    SciTech Connect

    Abraham, K.M.; Koch, V.R.; Blakley, T.J.

    2000-04-01

    Inorganic-organic composite solid polymer electrolytes (CSPEs) have been prepared from the poly(ethylene oxide) (PEO)-like electrolytes of the general formula polyvinylidene fluoride-hexafluoropropylene (PVdF-HFP)-PEO{sub n}-LiX and Li{sup +}-conducting ceramic powders. In the PEO-like electrolytes, PVdF-HFP is the copolymer of PVdF and HFP, PEO{sub n} is a nonvolatile oligomeric polyethylene oxide of {approximately}400 g/mol molecular weight, and LiX is lithium bis(trifluoroethylsulfonyl)imide. Two types of inorganic oxide ceramic powders were used: a highly Li{sup +}-conducting material of the composition 14 mol % Li{sub 2}O-9Al{sub 2}O{sub 3}-38TiO{sub 2}-39P{sub 2}O{sub 5}, and the poorly Li{sup +}-conducting Li-silicates Li{sub 4{minus}x}M{sub x}SiO{sub 4} where M is Ca or Mg and x is 0 or 0.05. The composite electrolytes can be prepared as thin membranes in which the Li{sup +} conductivity and good mechanical strength of the Li{sup +}-conducting inorganic ceramics are complemented by the structural flexibility and high conductivity of organic polymer electrolytes. Excellent electrochemical and thermal stabilities have been demonstrated for the electrolyte films. Li//composite electrolyte//LiCoO{sub 2} rechargeable cells have been fabricated and cycled at room temperature and 50 C.

  1. Organic matter diagenesis in shallow water carbonate sediments

    NASA Astrophysics Data System (ADS)

    Ingalls, Anitra E.; Aller, Robert C.; Lee, Cindy; Wakeham, Stuart G.

    2004-11-01

    Muddy carbonate deposits near the Dry Tortugas, Florida, are characterized by high organic carbon remineralization rates. However, approximately half of the total sedimentary organic matter potentially supporting remineralization is occluded in CaCO 3 minerals (intracrystalline). While a portion of nonintracrystalline organic matter appears to cycle rapidly, intracrystalline organic matter has an approximately constant concentration with depth, suggesting that as long as its protective mineral matrix is intact, it is not readily remineralized. Organic matter in excess of intracrystalline organic matter that is preserved may have a variety of mineral associations (e.g., intercrystalline, adsorbed or detrital). In surface sediment, aspartic acid contributed ˜22 mole % and ˜50 mole % to nonintracrystalline and intracrystalline pools, respectively. In deeper sediment (1.6-1.7m), the composition of hydrolyzable amino acids in both pools was similar (aspartic acid ˜40 mole %). Like amino acids, intracrystalline and nonintracrystalline fatty acids have different compositions in surface sediments, but are indistinguishable at depth. These data suggest that preserved organic matter in the nonintracrystalline pool is stabilized by its interactions with CaCO 3. Neutral lipids are present in very low abundances in the intracrystalline pool and are extensively degraded in both the intracrystalline and nonintracrystalline pools, suggesting that mineral interactions do not protect these compounds from degradation. The presence of chlorophyll- a, but absence of phytol, in the intracrystalline lipid pool demonstrates that chloropigments are present only in the nonintracrystalline pool. Sedimentary chloropigments decrease with depth at similar rates in Dry Tortugas sediments as found in alumino-silicate sediments from the Long Island Sound, suggesting that chloropigment degradation is largely unaffected by mineral interactions. Overall, however, inclusion and protection of

  2. Nanoscale Structure Of Organic Matter Explain Its Recalcitrance To Degradation

    NASA Astrophysics Data System (ADS)

    Spagnol, M.; Salati, S.; Papa, G.; Tambone, F.; Adani, F.

    2009-04-01

    Recalcitrance can be defined as the natural resistance of organic matter (OM) to microbial and enzymatic deconstruction (Himmel et al., 2007). The nature of OM recalcitrance remained not completely understood and more studies need above all to elucidate the role of the chemical topography of the OM at nanometer scale. Hydrolytic enzymes responsible of OM degradation have a molecular weight of 20-25 kD, corresponding to a size of about 4 nm, hardly penetrate into micropores (i.e. the pore having a diameter < 2 nm) and small mesopores (i.e. pores having a diameter 2 < 50 nm) of OM structures, so that their activities are confined only to a portion of the total surface (Zimmerman et al., 2004; Chesson, 1997; Adani et al., 2006). As consequence of that the characterization of the organic matter at nano-scale became interesting in view to explain OM recalcitrance. The aim of this work was to asses the effect of the nano-scale structure of OM versus its recalcitrance. The evolution of organic matter of organic matrices was studied in two systems: plant residue-soil system and simulated landfill system. Plant residues were incubated in soil for one year and recalcitrant fraction, i.e. humic acid, was isolated and studied. Laboratory simulated landfill considered organic fraction of municipal solid waste sampled at different stages of evolution from a full scale plant and incubated under anaerobic condition for one year. In addition the nano-scale structure of fossilized OM (leonardite, chair coal and graphite) was detected as used as model of recalcitrant OM. Nano-scale structures were detected by using meso and microporosity detection. In particular microporosity was determined by adsorption method using CO2 at 273 K and Non Local Density Functional Theory (NLDFT) method was applied to measure the CO2 adsorption isotherms. On the other hand mesoporosity was detected by using N2 adsorption method at 77 K. The BET (Brunauer-Emmett-Teller) equation and the BJH (Barret

  3. Spin Hall Effect in Disordered Organic Solids

    NASA Astrophysics Data System (ADS)

    Yu, Z. G.

    2015-07-01

    We study the spin Hall effect (SHE) in disordered π -conjugated organic solids, where individual molecules are oriented randomly and electrical conduction is via carrier hopping. The SHE, which arises from interference between direct (i →j ) and indirect (i →k →j ) hoppings in a triad consisting of three molecules i , j , and k , is found to be proportional to λ (ni×nj+nj×nk+nk×ni), where λ is the spin admixture of π electrons due to the spin-orbit coupling and ni is the orientation vector of molecule i . Electrical conductivity σq q (q =x ,y ,z ) and spin Hall conductivity σsh are computed by numerically solving the master equations of a system containing 32 ×32 ×32 molecules and summing over contributions from all triads in the system. The obtained value of the spin Hall angle Θsh is consistent with experimental data in PEDOT:PSS, with a predicted temperature dependence of log Θsh˜T-1 /4 .

  4. Extraction of organic compounds from solid samples

    SciTech Connect

    Junk, G.A.; Richard, J.J.

    1986-04-01

    Pyridine, benzene, cyclohexane, methylene chloride, dimethyl sulfoxide, dimethylformamide, and n-methylpyrrolidone have been compared for the extraction of polycyclic organic materials (POMs) from urban air, diesel, and stack particulate samples. Both sonic and Soxhlet techniques have been examined for both natural environmental particulates and particulates spiked with selected POMs. The extraction results vary for different polycyclic compounds adsorbed on different solid matrices, so no single solvent or extraction technique could be unambiguously recommended. However, comparative average results for 14 compounds spiked onto fly ash at 0.1, 0.25, and 1.0 ..mu..g/g showed pyridine to have 1.5 times more extraction efficiency than benzene. These and other reported results suggest that pyridine deserves more attention as an extractant for particulate samples. In separate tests, recoveries of POMs from fly ash were not improved by deactivation with aqueous solutions of ammonium hydroxide, thiocyanate and carbonate, and sodium nitrite prior to the extraction. 39 references, 5 tables.

  5. Microbial Mineralization of Soil Organic Matter: Role of Chemical Composition and Structural Organization

    NASA Astrophysics Data System (ADS)

    Khalaf, M. M. R.; Chilom, G.; Rice, J. A.

    2014-12-01

    The purpose of this study is to quantitatively assess the effect of organic matter self-assembly on its resistance to microbial mineralization. Humic acids isolated from leonardite, two peats and a mineral soil were used as organic matter samples because they provide a broad range of variability in terms of the origin and nature of their organic components. Using a solvent-based fractionation method, humic acid samples were disassembled into a humic-like component and a humic-lipid composite. The humic-lipid composite was further disassembled into an amphiphilic and a lipid component using an alkaline aqueous solution. Mixtures that reproduced the composition of self-assembled samples were prepared by mixing the solid individual fractions in the exact proportions that they were present in the original material. The original humic acids or their corresponding mixtures were added as the sole carbon source in separate aerobic cultures containing a microbial consortium isolated from a mineral soil. After incubation for 125 days mineralization of the self-assembled samples was shown to be higher by as much as 70% compared to their corresponding physical mixtures. The extent of mineralization of the self-assembled samples was not correlated to the material's chemical composition or hydrophobicity index obtained from their 13C solid-state NMR spectra. In contrast, mineralization of the physical mixtures and the individual fractions did vary with chemical composition and was accompanied by preferential mineralization of alkyl carbon. These results suggest the microbial mineralization of humic acids is related to their self-assembly.

  6. Investigation of the organic matter in inactive nuclear tank liquids

    SciTech Connect

    Schenley, R.L.; Griest, W.H.

    1990-08-01

    Environmental Protection Agency (EPA) methodology for regulatory organics fails to account for the organic matter that is suggested by total organic carbon (TOC) analysis in the Oak Ridge National Laboratory (ORNL) inactive nuclear waste-tank liquids and sludges. Identification and measurement of the total organics are needed to select appropriate waste treatment technologies. An initial investigation was made of the nature of the organics in several waste-tank liquids. This report details the analysis of ORNL wastes.

  7. Pyrolysis-GCMS Analysis of Solid Organic Products from Catalytic Fischer-Tropsch Synthesis Experiments

    NASA Technical Reports Server (NTRS)

    Locke, Darren R.; Yazzie, Cyriah A.; Burton, Aaron S.; Niles, Paul B.; Johnson, Natasha M.

    2015-01-01

    Abiotic synthesis of complex organic compounds in the early solar nebula that formed our solar system is hypothesized to occur via a Fischer-Tropsch type (FTT) synthesis involving the reaction of hydrogen and carbon monoxide gases over metal and metal oxide catalysts. In general, at low temperatures (less than 200 C), FTT synthesis is expected to form abundant alkane compounds while at higher temperatures (greater than 200 C) it is expected to product lesser amounts of n-alkanes and greater amounts of alkene, alcohol, and polycyclic aromatic hydrocarbons (PAHs). Experiments utilizing a closed-gas circulation system to study the effects of FTT reaction temperature, catalysts, and number of experimental cycles on the resulting solid insoluble organic products are being performed in the laboratory at NASA Goddard Space Flight Center. These experiments aim to determine whether or not FTT reactions on grain surfaces in the protosolar nebula could be the source of the insoluble organic matter observed in meteorites. The resulting solid organic products are being analyzed at NASA Johnson Space Center by pyrolysis gas chromatography mass spectrometry (PY-GCMS). PY-GCMS yields the types and distribution of organic compounds released from the insoluble organic matter generated from the FTT reactions. Previously, exploratory work utilizing PY-GCMS to characterize the deposited organic materials from these reactions has been reported. Presented here are new organic analyses using magnetite catalyst to produce solid insoluble organic FTT products with varying reaction temperatures and number of experimental cycles.

  8. Enhanced dissolution of cinnabar (mercuric sulfide) by dissolved organic matter isolated from the Florida Everglades

    SciTech Connect

    Ravichandran, M.; Ryan, J.N.; Aiken, G.R.; Reddy, M.M.

    1998-11-01

    Organic matter isolated from the Florida Everglades caused a dramatic increase in mercury release from cinnabar (HgS), a solid with limited solubility. Hydrophobic (a mixture of both humic and fulvic) acids dissolved more mercury than hydrophilic acids and other nonacid fractions of dissolved organic matter (DOM). Cinnabar dissolution by isolated organic matter and natural water samples was inhibited by cations such as Ca{sup 2+}. Dissolution was independent of oxygen content in experimental solutions. Dissolution experiments conducted in Dl water had no detectable dissolved mercury. The presence of various inorganic (chloride, sulfate, or sulfide) and organic ligands (salicylic acid, acetic acid, EDTA, or cysteine) did not enhance the dissolution of mercury from the mineral. Aromatic carbon content in the isolates correlated positively with enhanced cinnabar dissolution. {zeta}-potential measurements indicated sorption of negatively charged organic matter to the negatively charged cinnabar at pH 6.0. Possible mechanisms of dissolution include surface complexation of mercury and oxidation of surface sulfur species by the organic matter.

  9. Characterizing Variability In Ohio River Natural Organic Matter

    EPA Science Inventory

    Surface water contains natural organic matter (NOM) which reacts with disinfectants creating disinfection byproducts (DBPs), some of which are USEPA regulated contaminants. Characterizing NOM can provide important insight on DBP formation and water treatment process adaptation t...

  10. Ectomycorrhizal fungi - potential organic matter decomposers, yet not saprotrophs.

    PubMed

    Lindahl, Björn D; Tunlid, Anders

    2015-03-01

    Although hypothesized for many years, the involvement of ectomycorrhizal fungi in decomposition of soil organic matter remains controversial and has not yet been fully acknowledged as an important factor in the regulation of soil carbon (C) storage. Here, we review recent findings, which support the view that some ectomycorrhizal fungi have the capacity to oxidize organic matter, either by 'brown-rot' Fenton chemistry or using 'white-rot' peroxidases. We propose that ectomycorrhizal fungi benefit from organic matter decomposition primarily through increased nitrogen mobilization rather than through release of metabolic C and question the view that ectomycorrhizal fungi may act as facultative saprotrophs. Finally, we discuss how mycorrhizal decomposition may influence organic matter storage in soils and mediate responses of ecosystem C sequestration to environmental changes. PMID:25524234

  11. Invasive Mold Infections in Solid Organ Transplant Recipients

    PubMed Central

    Crabol, Yoann; Lortholary, Olivier

    2014-01-01

    Invasive mold infections represent an increasing source of morbidity and mortality in solid organ transplant recipients. Whereas there is a large literature regarding invasive molds infections in hematopoietic stem cell transplants, data in solid organ transplants are scarcer. In this comprehensive review, we focused on invasive mold infection in the specific population of solid organ transplant. We highlighted epidemiology and specific risk factors for these infections and we assessed the main clinical and imaging findings by fungi and by type of solid organ transplant. Finally, we attempted to summarize the diagnostic strategy for detection of these fungi and tried to give an overview of the current prophylaxis treatments and outcomes of these infections in solid organ transplant recipients. PMID:25525551

  12. Impact of organic-mineral matter interactions on thermal reaction pathways for coal model compounds

    SciTech Connect

    Buchanan, A.C. III; Britt, P.F.; Struss, J.A.

    1995-07-01

    Coal is a complex, heterogeneous solid that includes interdispersed mineral matter. However, knowledge of organic-mineral matter interactions is embryonic, and the impact of these interactions on coal pyrolysis and liquefaction is incomplete. Clay minerals, for example, are known to be effective catalysts for organic reactions. Furthermore, clays such as montmorillonite have been proposed to be key catalysts in the thermal alteration of lignin into vitrinite during the coalification process. Recent studies by Hatcher and coworkers on the evolution of coalified woods using microscopy and NMR have led them to propose selective, acid-catalyzed, solid state reaction chemistry to account for retained structural integrity in the wood. However, the chemical feasibility of such reactions in relevant solids is difficult to demonstrate. The authors have begun a model compound study to gain a better molecular level understanding of the effects in the solid state of organic-mineral matter interactions relevant to both coal formation and processing. To satisfy the need for model compounds that remain nonvolatile solids at temperatures ranging to 450 C, model compounds are employed that are chemically bound to the surface of a fumed silica (Si-O-C{sub aryl}linkage). The organic structures currently under investigation are phenethyl phenyl ether (C{sub 6}H{sub 5}CH{sub 2}CH{sub 2}OC{sub 6}H{sub 5}) derivatives, which serve as models for {beta}-alkyl aryl ether units that are present in lignin and lignitic coals. The solid-state chemistry of these materials at 200--450 C in the presence of interdispersed acid catalysts such as small particle size silica-aluminas and montmorillonite clay will be reported. Initial focus will be on defining the potential impact of these interactions on coal pyrolysis and liquefaction.

  13. Nitrogen isotopic fractionation during abiotic synthesis of organic solid particles

    NASA Astrophysics Data System (ADS)

    Kuga, Maïa; Carrasco, Nathalie; Marty, Bernard; Marrocchi, Yves; Bernard, Sylvain; Rigaudier, Thomas; Fleury, Benjamin; Tissandier, Laurent

    2014-05-01

    The formation of organic compounds is generally assumed to result from abiotic processes in the Solar System, with the exception of biogenic organics on Earth. Nitrogen-bearing organics are of particular interest, notably for prebiotic perspectives but also for overall comprehension of organic formation in the young Solar System and in planetary atmospheres. We have investigated abiotic synthesis of organics upon plasma discharge, with special attention to N isotope fractionation. Organic aerosols were synthesized from N2-CH4 and N2-CO gaseous mixtures using low-pressure plasma discharge experiments, aimed at simulating chemistry occurring in Titan's atmosphere and in the protosolar nebula, respectively. The nitrogen content, the N speciation and the N isotopic composition were analyzed in the resulting organic aerosols. Nitrogen is efficiently incorporated into the synthesized solids, independently of the oxidation degree, of the N2 content of the starting gas mixture, and of the nitrogen speciation in the aerosols. The aerosols are depleted in 15N by 15-25‰ relative to the initial N2 gas, whatever the experimental setup is. Such an isotopic fractionation is attributed to mass-dependent kinetic effect(s). Nitrogen isotope fractionation upon electric discharge cannot account for the large N isotope variations observed among Solar System objects and reservoirs. Extreme N isotope signatures in the Solar System are more likely the result of self-shielding during N2 photodissociation, exotic effect during photodissociation of N2 and/or low temperature ion-molecule isotope exchange. Kinetic N isotope fractionation may play a significant role in the Titan's atmosphere. On the Titan's night side, 15N-depletion resulting from electron driven reactions may counterbalance photo-induced 15N enrichments occurring on the day's side. We also suggest that the low δ15N values of Archaean organic matter (Beaumont and Robert, 1999) are partly the result of abiotic synthesis of

  14. Composition and reactivity of ferrihydrite-organic matter associations

    NASA Astrophysics Data System (ADS)

    Eusterhues, Karin; Hädrich, Anke; Neidhardt, Julia; Küsel, Kirsten; Totsche, Kai

    2014-05-01

    The formation of organo-mineral associations affects many soil forming processes. On the one hand, it will influence soil organic matter composition and development, because the complex organic matter mixtures usually fractionate during their association with mineral surfaces. Whereas the associated fraction is supposed to be stabilized, the non-associated fraction remains mobile and available to degradation by microorganisms. On the other hand, the organic coating will completely change the interface properties of Fe oxides such as solubility, charge and hydrophobicity. This in turn will strongly influence their reactivity towards nutrients and pollutants, the adsorption of new organic matter, and the availability of ferric Fe towards microorganisms. To better understand such processes we produced ferrihydrite-organic matter associations by adsorption and coprecipitation in laboratory experiments. As a surrogate for dissolved soil organic matter we used the water-extractable fraction of a Podzol forest-floor layer under spruce. Sorptive fractionation of the organic matter was investigated by 13C NMR and FTIR. Relative to the original forest-floor extract, the ferrihydrite-associated OM was enriched in polysaccharides but depleted in aliphatic C and carbonyl C, especially when adsorption took place. Liquid phase incubation experiments were carried out with an inoculum extracted from the podzol forest-floor under oxic conditions at pH 4.8 to quantify the mineralization of the adsorbed and coprecipitated organic matter. These experiments showed that the association with ferrihydrite stabilized the associated organic matter, but that differences in the degradability of adsorbed and coprecipitated organic matter were small. We therefore conclude that coprecipitation does not lead to a significant formation of microbial inaccessible organic matter domains. Microbial reduction experiments were performed using Geobacter bremensis. We observed that increasing amounts of

  15. High dimensional reflectance analysis of soil organic matter

    NASA Technical Reports Server (NTRS)

    Henderson, T. L.; Baumgardner, M. F.; Franzmeier, D. P.; Stott, D. E.; Coster, D. C.

    1992-01-01

    Recent breakthroughs in remote-sensing technology have led to the development of high spectral resolution imaging sensors for observation of earth surface features. This research was conducted to evaluate the effects of organic matter content and composition on narrowband soil reflectance across the visible and reflective infrared spectral ranges. Organic matter from four Indiana agricultural soils, ranging in organic C content from 0.99 to 1.72 percent, was extracted, fractionated, and purified. Six components of each soil were isolated and prepared for spectral analysis. Reflectance was measured in 210 narrow bands in the 400- to 2500-nm wavelength range. Statistical analysis of reflectance values indicated the potential of high dimensional reflectance data in specific visible, near-infrared, and middle-infrared bands to provide information about soil organic C content, but not organic matter composition. These bands also responded significantly to Fe- and Mn-oxide content.

  16. The search for indigenous lunar organic matter.

    NASA Technical Reports Server (NTRS)

    Sagan, C.

    1972-01-01

    It is argued that the absence of organic compounds from returned lunar samples is to be expected even for a lunar history rich in primordial organics. The sites most likely to yield lunar organic compounds have not been investigated, and there may be an area of investigation conceivably critical to problems in prebiological chemistry and the early history of the solar system awaiting continued lunar exploration, manned or unmanned.

  17. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2009-01-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  18. Organic Matter in Space (IAU S251)

    NASA Astrophysics Data System (ADS)

    Kwok, Sun; Sanford, Scott

    2008-10-01

    Preface; From the local organising committee; Organising committee; Conference participants; Opening address of Symposium 251 C. Cesarsky; Session I. Observations of organic compounds beyond the Solar System William Irvine, Ewine van Dishoeck, Yvonne Pendleton and Hans Olofsson; Session II. Organic compounds within the Solar System Scott Sandford, Ernst Zinner and Dale Cruikshank; Session III. Laboratory analogues of organic compounds in space Max Bernstein and Thomas Henning; Banquet speech; Author index; Object index.

  19. Solid organ fabrication: comparison of decellularization to 3D bioprinting.

    PubMed

    Jung, Jangwook P; Bhuiyan, Didarul B; Ogle, Brenda M

    2016-01-01

    Solid organ fabrication is an ultimate goal of Regenerative Medicine. Since the introduction of Tissue Engineering in 1993, functional biomaterials, stem cells, tunable microenvironments, and high-resolution imaging technologies have significantly advanced efforts to regenerate in vitro culture or tissue platforms. Relatively simple flat or tubular organs are already in (pre)clinical trials and a few commercial products are in market. The road to more complex, high demand, solid organs including heart, kidney and lung will require substantive technical advancement. Here, we consider two emerging technologies for solid organ fabrication. One is decellularization of cadaveric organs followed by repopulation with terminally differentiated or progenitor cells. The other is 3D bioprinting to deposit cell-laden bio-inks to attain complex tissue architecture. We reviewed the development and evolution of the two technologies and evaluated relative strengths needed to produce solid organs, with special emphasis on the heart and other tissues of the cardiovascular system. PMID:27583168

  20. Composition of structural fragments and the mineralization rate of organic matter in zonal soils

    NASA Astrophysics Data System (ADS)

    Larionova, A. A.; Zolotareva, B. N.; Kolyagin, Yu. G.; Kvitkina, A. K.; Kaganov, V. V.; Kudeyarov, V. N.

    2015-10-01

    Comparative analysis of the climatic characteristics and the recalcitrance against decomposition of organic matter in the zonal soil series of European Russia, from peat surface-gley tundra soil to brown semidesert soil, has assessed the relationships between the period of biological activity, the content of chemically stable functional groups, and the mineralization of humus. The stability of organic matter has been determined from the ratio of functional groups using the solid-state 13C NMR spectroscopy of soil samples and the direct measurements of organic matter mineralization from CO2 emission. A statistically significant correlation has been found between the period of biological activity and the humification indices: the CHA/CFA ratio, the aromaticity, and the alkyl/ O-alkyl ratio in organic matter. The closest correlation has been observed between the period of biological activity and the alkyl/ O-alkyl ratio; therefore, this parameter can be an important indicator of the soil humus status. A poor correlation between the mineralization rate and the content of chemically stable functional groups in soil organic matter has been revealed for the studied soil series. At the same time, the lowest rate of carbon mineralization has been observed in southern chernozem characterized by the maximum content of aromatic groups (21% Corg) and surface-gley peat tundra soil, where an extremely high content of unsubstituted CH2 and CH3 alkyl groups (41% Corg) has been noted.

  1. Modeling organic matter stabilization during windrow composting of livestock effluents.

    PubMed

    Oudart, D; Paul, E; Robin, P; Paillat, J M

    2012-01-01

    Composting is a complex bioprocess, requiring a lot of empirical experiments to optimize the process. A dynamical mathematical model for the biodegradation of the organic matter during the composting process has been developed. The initial organic matter expressed by chemical oxygen demand (COD) is decomposed into rapidly and slowly degraded compartments and an inert one. The biodegradable COD is hydrolysed and consumed by microorganisms and produces metabolic water and carbon dioxide. This model links a biochemical characterization of the organic matter by Van Soest fractionating with COD. The comparison of experimental and simulation results for carbon dioxide emission, dry matter and carbon content balance showed good correlation. The initial sizes of the biodegradable COD compartments are explained by the soluble, hemicellulose-like and lignin fraction. Their sizes influence the amplitude of the carbon dioxide emission peak. The initial biomass is a sensitive variable too, influencing the time at which the emission peak occurs. PMID:23393964

  2. Soil microstructure and organic matter: keys for chlordecone sequestration.

    PubMed

    Woignier, T; Fernandes, P; Soler, A; Clostre, F; Carles, C; Rangon, L; Lesueur-Jannoyer, M

    2013-11-15

    Past applications of chlordecone, a persistent organochlorine pesticide, have resulted in diffuse pollution of agricultural soils, and these have become sources of contamination of cultivated crops as well as terrestrial and marine ecosystems. Chlordecone is a very stable and recalcitrant molecule, mainly present in the solid phase, and has a strong affinity for organic matter. To prevent consumer and ecosystem exposure, factors that influence chlordecone migration in the environment need to be evaluated. In this study, we measured the impact of incorporating compost on chlordecone sequestration in andosols as a possible way to reduce plant contamination. We first characterized the transfer of chlordecone from soil to plants (radish, cucumber, and lettuce). Two months after incorporation of the compost, soil-plant transfers were reduced by a factor of 1.9-15 depending on the crop. Our results showed that adding compost modified the fractal microstructure of allophane clays thus favoring chlordecone retention in andosols. The complex structure of allophane and the associated low accessibility are important characteristics governing the fate of chlordecone. These results support our proposal for an alternative strategy that is quite the opposite of total soil decontamination: chlordecone sequestration. PMID:24056248

  3. Defining the quality of soil organic matter

    EPA Science Inventory

    Soils represent the largest terrestrial pool of carbon (C) and hold approximately two-thirds of all C held in these ecosystems. However, not all C in soils is of equal quality. Some fractions of the organic forms, i.e., soil organic carbon (SOC) have long residence times while ...

  4. Roles of organic matter in sediment diagenesis

    SciTech Connect

    Gautier, D.L.

    1986-01-01

    This book is a collection of papers presented at a 1984 symposium of the Society of Economic Paleontologists and Mineralogists (SEPM). It purpose, in the words of its editor, is to bring to the attention of the sedimentological community the importance of interaction of organic compounds with the inorganic sedimentary system and the degree to which organic compounds drive diagenetic systems. Its 16 papers cover topics ranging from laboratory carbonate dissolution to hydrocarbon source-rock evaluation. It contains an excellent group of papers on the role of organic-inorganic interactions in porosity enhancement. An excellent contribution is the paper on organic and inorganic diagenesis in the Shinjo oil field of Japan. At the other end of the scale, however, are several theoretical papers that present greatly oversimplified and/or underedited thermodynamic and mass-transfer models. Nearly all of the papers contribute to the dialogue between organic and inorganic sedimentologists. Because much of this interchange has occurred in support of petroleum exploration, the dialogue has waxed and waned with the ups and downs of the oil market. However, hydrocarbon prospects do not necessarily present the best opportunities for unraveling the complex interrelations between organic and inorganic diagenesis. These interrelations are important in a wide range of diagenetic settings, including early diagenesis in low-organic sediments that have little or no hydrocarbon potential. It is hoped that this book will pave the way for expanded basic research in one of the most important aspects of sediment diagenesis.

  5. Effects of Crayfish on Quality of Fine Particulate Organic Matter

    NASA Astrophysics Data System (ADS)

    Montemarano, J. J.; Kershner, M. W.; Leff, L. G.

    2005-05-01

    The origin and ontogeny of detritus often determines its bioavailability. Crayfish shred and consume detrital organic matter, influencing fine particulate organic matter (FPOM) availability, composition and quality. Given consumption of FPOM by many invertebrates, crayfish can indirectly affect these organisms by altering FPOM bioavailability through organic matter fragmentation, biofilm disturbance, and defecation. These effects may or may not vary among coarse particulate organic matter (CPOM) from different leaf species. To assess crayfish effects on FPOM quality, crayfish were fed stream-conditioned maple or oak leaves in hanging 1-mm mesh-bottom baskets in aquaria. After 12 h, crayfish and remaining leaves were removed. FPOM fragments that fell through the mesh were vacuum filtered and analyzed for percent organic matter, C:N ratio, and bacterial abundance. The same analyses were conducted on crayfish feces collected using finger cots encasing crayfish abdomens. C:N ratios did not differ between feces and maple leaf CPOM, but were lower in FPOM produced through fragmentation and disturbance (P = 0.023). Overall, crayfish alter the ontogeny of detritus, which may, in turn, affect stream FPOM dynamics.

  6. Organic Matter Application Can Reduce Copper Toxicity in Tomato Plants

    ERIC Educational Resources Information Center

    Campbell, Brian

    2010-01-01

    Copper fungicides and bactericides are often used in tomato cultivation and can cause toxic Cu levels in soils. In order to combat this, organic matter can be applied to induce chelation reactions and form a soluble complex by which much of the Cu can leach out of the soil profile or be taken up safely by plants. Organic acids such as citric,…

  7. Black Carbon in Estuarine and Coastal Ocean Dissolved Organic Matter

    NASA Technical Reports Server (NTRS)

    Mannino, Antonio; Harvey, H. Rodger

    2003-01-01

    Analysis of high-molecular-weight dissolved organic matter (DOM) from two estuaries in the northwest Atlantic Ocean reveals that black carbon (BC) is a significant component of previously uncharacterized DOM, suggesting that river-estuary systems are important exporters of recalcitrant dissolved organic carbon to the ocean.

  8. Pedogenesis evolution of mine technosols: focus onto organic matter implication

    NASA Astrophysics Data System (ADS)

    Grégoire, Pascaud; Marilyne, Soubrand; Laurent, Lemee; Husseini Amelène, El-Mufleh Al; Marion, Rabiet; Emmanuel, Joussein

    2014-05-01

    Keywords: Mine technosols, pedogenesis, organic matter, environmental impact, pyr-GC-MS Technosols include soils subject to strong anthropogenic pressure and particularly to soil influenced by human transformed materials. In this context, abandoned mine sites contain a large amount of transformed waste materials often enriched with metals and/or metalloids. The natural evolution of technosols (pedogenesis) may induces the change in contaminants behaviour in term of stability of bearing phases, modification of pH oxydo-reduction conditions, organic matter turnover, change in permeability, or influence of vegetation cover. The fate of these elements in the soil can induce major environmental problems (contamination of biosphere and water resource). This will contribute to a limited potential use of these soils, which represent yet a large area around the world. The initial contamination of the parental material suggests that the pedological cover would stabilize the soil; however, the chemical reactivity must be taken in consideration particularly with respect to potential metal leachings. In this case, it is quite important to understand the development of soil in this specific context. Consequently, the global aims of this study are to understand the functioning of mine Technosols focusing onto the organic matter implication in their pedogenesis. Indeed, soil organic matter constitutes an heterogeneous fraction of organic compounds that plays an important role in the fate and the transport of metals and metalloids in soils. Three different soil profiles were collected representative to various mining context (contamination, time, climat), respectively to Pb-Ag, Sn and Au exploitations. Several pedological parameters were determined like CEC, pH, %Corg, %Ntot, C/N ratio, grain size distribution and chemical composition. The evolution of the nature of organic matter in Technosol was studied by elemental analyses and thermochemolysis was realized on the total and

  9. Co-pyrolysis of coal with organic solids

    SciTech Connect

    Straka, P.; Buchtele, J.

    1995-12-01

    The co-pyrolysis of high volatile A bituminous coal with solid organic materials (proteins, cellulose, polyisoprene, polystyrene, polyethylene-glycolterephtalate-PEGT) at a high temperature conditions was investigated. Aim of the work was to evaluate, firstly, the changes of the texture and of the porous system of solid phase after high temperature treatment in presence of different types of macromolecular solids, secondly, properties and composition of the tar and gas. Considered organic solids are important waste components. During their co-pyrolysis the high volatile bituminous coal acts as a hydrogen donor in the temperature rank 220-480{degrees}C. In the rank 500- 1000{degrees}C the solid phase is formed. The co-pyrolysis was carried out at heating rate 3 K/min. It was found that an amount of organic solid (5-10%) affects important changes in the optical texture forms of solid phase, in the pore distribution and in the internal surface area. Transport large pores volume decreases in presence of PEGT, polystyrene and cellulose and increases in presence of proteins and polyisoprene. (image analysis measurements show that the tendency of coal to create coarse pores during co-pyrolysis is very strong and increases with increasing amount of organic solid in blend). An addition of considered materials changes the sorption ability (methylene blue test, iodine adsorption test), moreover, the reactivity of the solid phase.

  10. Chemical composition of dissolved organic matter draining permafrost soils

    NASA Astrophysics Data System (ADS)

    Ward, Collin P.; Cory, Rose M.

    2015-10-01

    Northern circumpolar permafrost soils contain roughly twice the amount of carbon stored in the atmosphere today, but the majority of this soil organic carbon is perennially frozen. Climate warming in the arctic is thawing permafrost soils and mobilizing previously frozen dissolved organic matter (DOM) from deeper soil layers to nearby surface waters. Previous studies have reported that ancient DOM draining deeper layers of permafrost soils was more susceptible to degradation by aquatic bacteria compared to modern DOM draining the shallow active layer of permafrost soils, and have suggested that DOM chemical composition may be an important control for the lability of DOM to bacterial degradation. However, the compositional features that distinguish DOM drained from different depths in permafrost soils are poorly characterized. Thus, the objective of this study was to characterize the chemical composition of DOM drained from different depths in permafrost soils, and relate these compositional differences to its susceptibility to biological degradation. DOM was leached from the shallow organic mat and the deeper permafrost layer of soils within the Imnavait Creek watershed on the North Slope of Alaska. DOM draining both soil layers was characterized in triplicate by coupling ultra-high resolution mass spectrometry, 13C solid-state NMR, and optical spectroscopy methods with multi-variate statistical analyses. Reproducibility of replicate mass spectra was high, and compositional differences resulting from interfering species or isolation effects were significantly smaller than differences between DOM drained from each soil layer. All analyses indicated that DOM leached from the shallower organic mat contained higher molecular weight, more oxidized, and more unsaturated aromatic species compared to DOM leached from the deeper permafrost layer. Bacterial production rates and bacterial efficiencies were significantly higher for permafrost compared to organic mat DOM

  11. GROUNDWATER TRANSPORT OF HYDROPHOBIC ORGANIC COMPOUNDS IN THE PRESENCE OF DISSOLVED ORGANIC MATTER

    EPA Science Inventory

    The effects of dissolved organic matter (DOM) on the transport of hydrophobic organic compounds in soil columns were investigated. Three compounds (naphthalene, phenanthrene and DDT) that spanned three orders of magnitude in water solubility were used. Instead of humic matter, mo...

  12. Process for hot briquetting of organic solid materials

    SciTech Connect

    Janusch, A.

    1982-11-23

    For the purpose of briquetting organic solid materials, such as brown coal or bituminous coal, the materials are heated by hot water and/or steam and under super-atmospheric pressure to temperatures exceeding 160/sup 0/ C. After discharging the organic solid materials, which have become dried to a great extent, the generated steam is separated by sucking off the steam without substantially cooling effect, bitumen-forming substances present within the organic solid materials thereby rapidly becoming homogeneously distributed. These homogeneously distributed binding agents give the compressed briquettes obtained a high strength and good mechanical properties when using substantially reduced compacting pressures as compared with known briquetting processes.

  13. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Astrophysics Data System (ADS)

    Messenger, Scott R.; Nakamura-Messenger, Keiko

    2015-08-01

    Interplanetary dust particles (IDPs) collected in the Earth’s stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (< um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission. We will present

  14. Compartmental model for organic matter digestion in facultative ponds.

    PubMed

    Giraldo, E; Garzón, A

    2002-01-01

    A model has been developed for the digestion of organic matter in facultative ponds in tropical regions. Complete mixing has been assumed for the aerobic and anaerobic compartments. Settling, aerobic layer oxidation, and anaerobic layer methanogenesis are the main processes for organic matter removal in the water column. Exchange processes between layers are dispersive or soluble exchange, solubilization and transport of organic matter from sediments to water column are also taken into account. Degradation of organic matter in the sediments produces gaseous emissions to the water column. The exchange between bubbles ascending and the water column was measured. The model was calibrated with data obtained from a pilot facultative pond built in Muña Reservoir in Bogotá. The pond was sampled during 4 months to compare data between its water hyacinth covered section and uncovered section. The results clearly show the relative importance of different BOD removal processes in facultative ponds and suggest modifications to further improve performance. The results from the model suggest that internal loadings to facultative ponds due to solubilization and return of organic matter from the sediments to the aerobic layer greatly influence the soluble BOD effluent concentration. Aerobic degradation activity in the facultative pond does not affect significantly the effluent concentration. Anaerobic degradation activity in the facultative pond can more easily achieve increases in the removal efficiencies of BOD. PMID:11833730

  15. Black carbon and organic matter stabilization in soil

    NASA Astrophysics Data System (ADS)

    Lehmann, J.; Liang, B.; Sohi, S.; Gaunt, J.

    2007-12-01

    Interaction with minerals is key to stabilization of organic matter in soils. Stabilization is commonly perceived to occur due to entrapment in pore spaces, encapsulation within aggregates or interaction with mineral surfaces. Typically only interactions between organic matter and minerals are considered in such a model. Here we demonstrate that black carbon may act very similar to minerals in soil in that it enhances the stabilization of organic matter. Mineralization of added organic matter was slower and incorporation into intra-aggregate fractions more rapid in the presence of black carbon. Added double-labeled organic matter was recovered in fractions with high amounts of black carbon. Synchrotron-based near-edge x-ray fine structure (NEXAFS) spectroscopy coupled to scanning transmission x-ray microscopy (STXM) suggested a possible interaction of microorganisms with black carbon surfaces and metabolization of residues. These findings suggest a conceptual model that includes carbon-carbon interactions and by-passing for more rapid stabilization of litter into what is commonly interpreted as stable carbon pools.

  16. Removal of dissolved organic matter by anion exchange: Effect of dissolved organic matter properties

    USGS Publications Warehouse

    Boyer, T.H.; Singer, P.C.; Aiken, G.R.

    2008-01-01

    Ten isolates of aquatic dissolved organic matter (DOM) were evaluated to determine the effect that chemical properties of the DOM, such as charge density, aromaticity, and molecular weight, have on DOM removal by anion exchange. The DOM isolates were characterized asterrestrial, microbial, or intermediate humic substances or transphilic acids. All anion exchange experiments were conducted using a magnetic ion exchange (MIEX) resin. The charge density of the DOM isolates, determined by direct potentiometric titration, was fundamental to quantifying the stoichiometry of the anion exchange mechanism. The results clearly show that all DOM isolates were removed by anion exchange; however, differences among the DOM isolates did influence their removal by MIEX resin. In particular, MIEX resin had the greatest affinity for DOM with high charge density and the least affinity for DOM with low charge density and low aromaticity. This work illustrates that the chemical characteristics of DOM and solution conditions must be considered when evaluating anion exchange treatment for the removal of DOM. ?? 2008 American Chemical Society.

  17. Organic Binder Developments for Solid Freeform Fabrication

    NASA Technical Reports Server (NTRS)

    Cooper, Ken; Mobasher, Amir A.

    2003-01-01

    A number of rapid prototyping techniques are under development at Marshall Space Flight Center's (MSFC) National Center for Advanced Manufacturing Rapid Prototyping Laboratory. Commercial binder developments in creating solid models for rapid prototyping include: 1) Fused Deposition Modeling; 2) Three Dimensional Printing; 3) Selective Laser Sintering (SLS). This document describes these techniques developed by the private sector, as well as SLS undertaken by MSFC.

  18. Organic matter on asteroid 130 Elektra

    NASA Technical Reports Server (NTRS)

    Cruikshank, D. P.; Brown, R. H.

    1987-01-01

    Infrared absorption spectra of a low-albedo water-rich asteroid appear to show a weak 3.4-micrometer carbon-hydrogen stretching mode band, which suggests the presence of hydrocarbons on asteroid 130 Elektra. The organic extract from the primitive carbonaceous chondritic Murchison meteorite shows similar spectral bands.

  19. Sorptive stabilization of organic matter by amorphous Al hydroxide

    NASA Astrophysics Data System (ADS)

    Schneider, M. P. W.; Scheel, T.; Mikutta, R.; van Hees, P.; Kaiser, K.; Kalbitz, K.

    2010-03-01

    Amorphous Al hydroxides (am-Al(OH) 3) strongly sorb and by this means likely protect dissolved organic matter (OM) against microbial decay in soils. We carried out batch sorption experiments (pH 4.5; 40 mg organic C L -1) with OM extracted from organic horizons under a Norway spruce and a European beech forest. The stabilization of OM by sorption was analyzed by comparing the CO 2 mineralized during the incubation of sorbed and non-sorbed OM. The mineralization of OM was evaluated based in terms of (i) the availability of the am-Al(OH) 3, thus surface OM loadings, (ii) spectral properties of OM, and (iii) the presence of phosphate as a competitor for OM. This was done by varying the solid-to-solution ratio (SSR = 0.02-1.2 g L -1) during sorption. At low SSRs, hence limited am-Al(OH) 3 availability, only small portions of dissolved OM were sorbed; for OM from Oa horizons, the mineralization of the sorbed fraction exceeded that of the original dissolved OM. The likely reason is competition with phosphate for sorption sites favouring the formation of weak mineral-organic bindings and the surface accumulation of N-rich, less aromatic and less complex OM. This small fraction controlled the mineralization of sorbed OM even at higher SSRs. At higher SSRs, i.e., with am-Al(OH) 3 more available, competition of phosphate decreased and aromatic compounds were sorbed selectively, which resulted in pronounced resistance of sorbed OM against decay. The combined OC mineralization of sorbed and non-sorbed OM was 12-65% less than that of the original DOM. Sorbed OM contributed only little to the overall OC mineralization. Stabilization of OC increased in direct proportion to am-Al(OH) 3 availability, despite constant aromatic C (˜30%). The strong stabilization at higher mineral availability is primarily governed by strong Al-OM bonds formed under less competitive conditions. Due to these strong bonds and the resulting strong stabilization, the surface loading, a proxy for the

  20. Organic matter in the Saturn system

    NASA Technical Reports Server (NTRS)

    Sagan, C.; Khare, B. N.; Lewis, J. S.

    1984-01-01

    Theoretical and experimental predictions of the formation (and outgassing) of organic molecules in the outer solar system are compared with Voyager IRIS spectral data for the Titan atmosphere. The organic molecules of Titan are of interest because the species and processes within the atmosphere of that moon may have had analogs in the early earth atmosphere 4 Gyr ago. The spacecraft data confirmed the presence of alkanes, ethane, propane, ethylene, alkynes, acetylene, butadiene, methylacetylene, nitriles, hydrogen cyanide, cyanoacetylene, and cyanogen, all heavier than the dominant CH4. Experimental simulation of the effects of UV photolysis, alpha and gamma ray irradiation, electrical discharges and proton and electron bombardment of similar gas mixtures has shown the best promise for modeling the reactions producing the Titan atmosphere chemicals.

  1. Stabilization of ancient organic matter in deep buried paleosols

    NASA Astrophysics Data System (ADS)

    Marin-Spiotta, E.; Chaopricha, N. T.; Mueller, C.; Diefendorf, A. F.; Plante, A. F.; Grandy, S.; Mason, J. A.

    2012-12-01

    Buried soils representing ancient surface horizons can contain large organic carbon reservoirs that may interact with the atmosphere if exposed by erosion, road construction, or strip mining. Paleosols in long-term depositional sites provide a unique opportunity for studying the importance of different mechanisms on the persistence of organic matter (OM) over millennial time-scales. We report on the chemistry and bioavailability of OM stored in the Brady soil, a deeply buried (7 m) paleosol in loess deposits of southwestern Nebraska, USA. The Brady Soil developed 9,000-13,500 years ago during a time of warming and drying. The Brady soil represents a dark brown horizon enriched in C relative to loess immediately above and below. Spanning much of the central Great Plains, this buried soil contains large C stocks due to the thickness of its A horizon (0.5 to 1 m) and wide geographic extent. Our research provides a unique perspective on long-term OM stabilization in deep soils using multiple analytical approaches. Soils were collected from the Brady soil A horizon (at 7 m depth) and modern surface A horizons (0-15 cm) at two sites for comparison. Soils were separated by density fractionation using 1.85 g ml-1 sodium polytungstate into: free particulate organic matter (fPOM) and aggregate-occluded (oPOM) of two size classes (large: >20 μm, and small: < 20 μm). The remaining dense fraction was separated into sand, silt, and clay size fractions. The distribution and age of C among density and particle-size fractions differed between surface and Brady soils. We isolated the source of the characteristic dark coloring of the Brady soil to the oPOM-small fraction, which also contained 20% of the total organic C pool in the Brady soil. The oPOM-small fraction and the bulk soil in the middle of the Brady A horizon had 14C ages of 10,500-12,400 cal yr BP, within the time that the soil was actively forming at the land surface. Surface soils showed modern ages. Lipid analyses of

  2. Do soils loose phosphorus with dissolved organic matter?

    NASA Astrophysics Data System (ADS)

    Kaiser, K.; Brödlin, D.; Hagedorn, F.

    2014-12-01

    During ecosystem development and soil formation, primary mineral sources of phosphorus are becoming increasingly depleted. Inorganic phosphorus forms tend to be bound strongly to or within secondary minerals, thus, are hardly available to plants and are not leached from soil. What about organic forms of phosphorus? Since rarely studied, little is known on the composition, mobility, and bioavailability of dissolved organic phosphorus. There is some evidence that plant-derived compounds, such as phytate, bind strongly to minerals as well, while microbial compounds, such as nucleotides and nucleic acids, may represent more mobile fractions of soil phosphorus. In some weakly developed, shallow soils, leaching losses of phosphorus seem to be governed by mobile organic forms. Consequently, much of the phosphorus losses observed during initial stages of ecosystem development may be due to the leaching of dissolved organic matter. However, the potentially mobile microbial compounds are enzymatically hydrolysable. Forest ecosystems on developed soils already depleted in easily available inorganic phosphorus are characterized by rapid recycling of organic phosphors. That can reduce the production of soluble forms of organic phosphorus as well as increase the enzymatic hydrolysis and subsequent plant uptake of phosphorus bound within dissolved organic matter. This work aims at giving an outlook to the potential role of dissolved organic matter in the cycling of phosphorus within developing forest ecosystems, based on literature evidence and first results of ongoing research.

  3. Isotopic composition of hydrogen in insoluble organic matter from cherts

    NASA Technical Reports Server (NTRS)

    Krishnamurthy, R. V.; Epstein, S.

    1991-01-01

    Robert (1989) reported the presence of unusually enriched hydrogen in the insoluble HF-HCl residue extracted from two chert samples of Eocene and Pliocene ages. Since the presence of heavy hydrogen might be due to the incorporation of extraterrestrial materials, we desired to reexamine the same samples to isolate the D-rich components. Our experiments did not reveal any D-rich components, but the hydrogen isotope composition of the insoluble residue of the two chert samples was well within the range expected for terrestrial organic matter. We also describe a protocol that needs to be followed in the hydrogen isotope analysis of any insoluble organic matter.

  4. Correlation of soil and sediment organic matter polarity to aqueous sorption of nonionic compounds

    USGS Publications Warehouse

    Kile, D.E.; Wershaw, R. L.; Chiou, C.T.

    1999-01-01

    Polarities of the soiL/sediment organic matter (SOM) in 19 soil and 9 freshwater sediment sam pies were determined from solid-state 13C-CP/MAS NMR spectra and compared with published partition coefficients (K(oc)) of carbon tetrachloride (CT) from aqueous solution. Nondestructive analysis of whole samples by solid-state NMR permits a direct assessment of the polarity of SOM that is not possible by elemental analysis. The percent of organic carbon associated with polar functional groups was estimated from the combined fraction of carbohydrate and carboxylamide-ester carbons. A plot of the measured partition coefficients (K(oc)) of carbon tetrachloride (CT) vs. percent polar organic carbon (POC) shows distinctly different populations of soils and sediments as well as a roughly inverse trend among the soil/sediment populations. Plots of K(oc) values for CT against other structural group carbon fractions did not yield distinct populations. The results indicate that the polarity of SOM is a significant factor in accounting for differences in K(oc) between the organic matter in soils and sediments. The alternate direct correlation of the sum of aliphatic and aromatic structural carbons with K(oc) illustrates the influence of nonpolar hydrocarbon on solute partition interaction. Additional elemental analysis data of selected samples further substantiate the effect of the organic matter polarity on the partition efficiency of nonpolar solutes. The separation between soil and sediment samples based on percent POC reflects definite differences of the properties of soil and sediment organic matters that are attributable to diagenesis.Polarities of the soil/sediment organic matter (SOM) in 19 soil and 9 freshwater sediment samples were determined from solid-state 13C-CP/MAS NMR spectra and compared with published partition coefficients (Koc) of carbon tetrachloride (CT) from aqueous solution. Nondestructive analysis of whole samples by solid-state NMR permits a direct

  5. Andic soils : mineralogical effect onto organic matter dynamics, organic matter effect onto mineral dynamics, or both?

    NASA Astrophysics Data System (ADS)

    Basile-Doelsch, Isabelle; Amundson, Ronald; Balesdent, Jérome; Borschneck, Daniel; Bottero, Jean-Yves; Colin, Fabrice; de Junet, Alexis; Doelsch, Emmanuel; Legros, Samuel; Levard, Clément; Masion, Armand; Meunier, Jean-Dominique; Rose, Jérôme

    2014-05-01

    From a strictly mineralogical point of view, weathering of volcanic glass produces secondary phases that are short range ordered alumino-silicates (SRO-AlSi). These are imogolite tubes (2 to 3 nm of diameter) and allophane supposedly spheres (3.5 to 5 nm). Their local structure is composed of a curved gibbsite Al layer and Si tetrahedra in the vacancies (Q0). Proto-imogolites have the same local structure but are roof-shape nanoparticles likely representing the precursors of imogolite and allophanes (Levard et al. 2010). These structures and sizes give to the SRO-AlSi large specific surfaces and high reactivities. In some natural sites, imogolites and allophanes are formed in large quantities. Aging of these phases may lead to the formation of more stable minerals (halloysite, kaolinite and gibbsite) (Torn et al 1997). In natural environments, when the weathering of volcanic glass is associated with the establishment of vegetation, the soils formed are generally andosols. These soils are particularly rich in organic matter (OM), which is explained by the high ability of SRO-AlSi mineral phases to form bonds with organic compounds. In a first order "bulk" approach, it is considered that these bonds strongly stabilize the organic compounds as their mean age can reach more than 10 kyrs in some studied sites (Basile-Doelsch et al. 2005; Torn et al. 1997). However, the structure of the mineral phases present in andosols deserves more attention. Traditionally, the presence in the SRO-AlSi andosols was shown by selective dissolution approaches by oxalate and pyrophosphate. Using spectroscopic methods, mineralogical analysis of SRO-AlSi in andosols samples showed that these mineral phases were neither imogolites nor allophanes as originally supposed, but only less organized structures remained in a state of proto-imogolites (Basile-Doelsch al. 2005 ; Levard et al., 2012). The presence of OM would have an inhibitory effect on the formation of secondary mineral phases, by

  6. Composition of dissolved organic matter in groundwater

    NASA Astrophysics Data System (ADS)

    Longnecker, Krista; Kujawinski, Elizabeth B.

    2011-05-01

    Groundwater constitutes a globally important source of freshwater for drinking water and other agricultural and industrial purposes, and is a prominent source of freshwater flowing into the coastal ocean. Therefore, understanding the chemical components of groundwater is relevant to both coastal and inland communities. We used electrospray ionization coupled with Fourier-transform ion cyclotron resonance mass spectrometry (ESI FT-ICR MS) to examine dissolved organic compounds in groundwater prior to and after passage through a sediment-filled column containing microorganisms. The data revealed that an unexpectedly high proportion of organic compounds contained nitrogen and sulfur, possibly due to transport of surface waters from septic systems and rain events. We matched 292 chemical features, based on measured mass:charge ( m/z) values, to compounds stored in the Kyoto Encyclopedia of Genes and Genomes (KEGG). A subset of these compounds (88) had only one structural isomer in KEGG, thus supporting tentative identification. Most identified elemental formulas were linked with metabolic pathways that produce polyketides or with secondary metabolites produced by plants. The presence of polyketides in groundwater is notable because of their anti-bacterial and anti-cancer properties. However, their relative abundance must be quantified with appropriate analyses to assess any implications for public health.

  7. Anesthetic Considerations for the Parturient After Solid Organ Transplantation.

    PubMed

    Moaveni, Daria M; Cohn, Jennifer H; Hoctor, Katherine G; Longman, Ryan E; Ranasinghe, J Sudharma

    2016-08-01

    Over the past 40 years, the success of organ transplantation has increased such that female solid organ transplant recipients are able to conceive and carry pregnancies successfully to term. Anesthesiologists are faced with the challenge of providing anesthesia care to these high-risk obstetric patients in the peripartum period. Anesthetic considerations include the effects of the physiologic changes of pregnancy on the transplanted organ, graft function in the peripartum period, and the maternal side effects and drug interactions of immunosuppressive agents. These women are at an increased risk of comorbidities and obstetric complications. Anesthetic management should consider the important task of protecting graft function. Optimal care of a woman with a transplanted solid organ involves management by a multidisciplinary team. In this focused review article, we review the anesthetic management of pregnant patients with solid organ transplants of the kidney, liver, heart, or lung. PMID:27285002

  8. Interstellar and Solar System Organic Matter Preserved in Interplanetary Dust

    NASA Technical Reports Server (NTRS)

    Messenger, Scott; Nakamura-Messenger, Keiko

    2015-01-01

    Interplanetary dust particles (IDPs) collected in the Earth's stratosphere derive from collisions among asteroids and by the disruption and outgassing of short-period comets. Chondritic porous (CP) IDPs are among the most primitive Solar System materials. CP-IDPs have been linked to cometary parent bodies by their mineralogy, textures, C-content, and dynamical histories. CP-IDPs are fragile, fine-grained (less than um) assemblages of anhydrous amorphous and crystalline silicates, oxides and sulfides bound together by abundant carbonaceous material. Ancient silicate, oxide, and SiC stardust grains exhibiting highly anomalous isotopic compositions are abundant in CP-IDPs, constituting 0.01 - 1 % of the mass of the particles. The organic matter in CP-IDPs is isotopically anomalous, with enrichments in D/H reaching 50x the terrestrial SMOW value and 15N/14N ratios up to 3x terrestrial standard compositions. These anomalies are indicative of low T (10-100 K) mass fractionation in cold molecular cloud or the outermost reaches of the protosolar disk. The organic matter shows distinct morphologies, including sub-um globules, bubbly textures, featureless, and with mineral inclusions. Infrared spectroscopy and mass spectrometry studies of organic matter in IDPs reveals diverse species including aliphatic and aromatic compounds. The organic matter with the highest isotopic anomalies appears to be richer in aliphatic compounds. These materials also bear similarities and differences with primitive, isotopically anomalous organic matter in carbonaceous chondrite meteorites. The diversity of the organic chemistry, morphology, and isotopic properties in IDPs and meteorites reflects variable preservation of interstellar/primordial components and Solar System processing. One unifying feature is the presence of sub-um isotopically anomalous organic globules among all primitive materials, including IDPs, meteorites, and comet Wild-2 samples returned by the Stardust mission.

  9. Caracterisation of anthropogenic contribution to the coastal fluorescent organic matter

    NASA Astrophysics Data System (ADS)

    El Nahhal, Ibrahim; Nouhi, Ayoub; Mounier, Stéphane

    2015-04-01

    It is known that most of the coastal fluorescent organic matter is of a terrestrial origin (Parlanti, 2000; Tedetti, Guigue, & Goutx, 2010). However, the contribution of the anthropogenic organic matter to this pool is not well defined and evaluated. In this work the monitoring of little bay (Toulon Bay, France) was done in the way to determine the organic fluorescent response during a winter period. The sampling campaign consisted of different days during the month of December, 2014 ( 12th, 15th, 17th, 19th) on 21 different sampling sites for the fluorescence measurements (without any filtering of the samples) and the whole month of December for the bacterial and the turbidity measurements. Excitation Emission Matrices (EEMs) of fluorescence (from 200 to 400 nm and 220 to 420 nm excitation and emission range) were treated by parallel factor analysis (PARAFAC).The parafac analysis of the EEM datasets was conducted using PROGMEEF software in Matlab langage. On the same time that the turbidity and bacterial measurement (particularly the E.Coli concentration) were determined. The results gives in a short time range, information on the the contribution of the anthropogenic inputs to the coastal fluorescent organic matter. In addition, the effect of salinity on the photochemical degradation of the anthropogenic organic matter (especially those from wastewater treatment plants) will be studied to investigate their fate in the water end member by the way of laboratory experiments. Parlanti, E. (2000). Dissolved organic matter fluorescence spectroscopy as a tool to estimate biological activity in a coastal zone submitted to anthropogenic inputs. Organic Geochemistry, 31(12), 1765-1781. doi:10.1016/S0146-6380(00)00124-8 Tedetti, M., Guigue, C., & Goutx, M. (2010). Utilization of a submersible UV fluorometer for monitoring anthropogenic inputs in the Mediterranean coastal waters. Marine Pollution Bulletin, 60(3), 350-62. doi:10.1016/j.marpolbul.2009.10.018

  10. A marine sink for chlorine in natural organic matter

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Northrup, Paul A.; Dunigan, Marisa R.; Ness, Katherine J.; Gellis, Austin B.

    2015-08-01

    Chloride--the most abundant ion in sea water--affects ocean salinity, and thereby seawater density and ocean circulation. Its lack of reactivity gives it an extremely long residence time. Other halogens are known to be incorporated into marine organic matter. However, evidence of similar transformations of seawater chloride is lacking, aside from emissions of volatile organochlorine by marine algae. Here we report high organochlorine concentrations from 180 to 700 mg kg-1 in natural particulate organic matter that settled into sediment traps at depths between 800 and 3,200 m in the Arabian Sea, taken between 1994 and 1995. X-ray spectromicroscopic imaging of chlorine bonding reveals that this organochlorine exists primarily in concentrated aliphatic forms consistent with lipid chlorination, along with a more diffuse aromatic fraction. High aliphatic organochlorine in particulate material from cultured phytoplankton suggests that primary production is a source of chlorinated organic matter. We also found that particulate algal detritus can act as an organic substrate for abiotic reactions involving Fe2+, H2O2 or light that incorporate chlorine into organic matter at levels up to several grams per kilogram. We conclude that transformations of marine chloride to non-volatile organochlorine through biological and abiotic pathways represent an oceanic sink for this relatively unreactive element.

  11. Adsorption combined with ultrafiltration to remove organic matter from seawater.

    PubMed

    Tansakul, Chatkaew; Laborie, Stéphanie; Cabassud, Corinne

    2011-12-01

    Organic fouling and biofouling are the major severe types of fouling of reverse osmosis (RO) membranes in seawater (SW) desalination. Low pressure membrane filtration such as ultrafiltration (UF) has been developed as a pre-treatment before reverse osmosis. However, UF alone may not be an effective enough pre-treatment because of the existence of low-molecular weight dissolved organic matter in seawater. Therefore, the objective of the present work is to study a hybrid process, powdered activated carbon (PAC) adsorption/UF, with real seawater and to evaluate its performance in terms of organic matter removal and membrane fouling. The effect of different PAC types and concentrations is evaluated. Stream-activated wood-based PAC addition increased marine organic matter removal by up to 70% in some conditions. Moreover, coupling PAC adsorption with UF decreased UF membrane fouling and the fouling occurring during short-term UF was totally reversible. It can be concluded that the hybrid PAC adsorption/UF process performed in crossflow filtration mode is a relevant pre-treatment process before RO desalination, allowing organic matter removal of 75% and showing no flux decline for short-term experiments. PMID:21996607

  12. Processing of Atmospheric Organic Matter by California Radiation Fogs

    NASA Astrophysics Data System (ADS)

    Collett, J. L.; Youngster, S. B.; Lee, T.; Chang, H.; Herckes, P.

    2005-12-01

    In many environments, organic compounds account for a significant fraction of fine particle mass. Because the lifetimes of accumulation mode aerosol particles are governed largely by interactions with clouds, it is important to understand how organic aerosol particles are processed by clouds and fogs. Recently we have examined the organic composition of radiation fogs in central California as well as how these fogs process organic aerosol particles and soluble organic trace gases. Observations indicate that organic matter is a significant component of the fog droplets, comprising approximately one-third of the total solute mass concentration. Concentrations of total organic carbon (TOC) range from approximately 2 to 41 ppmC. Approximately three-fourths of organic matter is typically found in solution as dissolved organic carbon (DOC). A variety of efforts have been made to characterize the composition of the fog organic matter, including analyses by GC/MS, HPLC, IC, NMR and IR. The most abundant species are typically low molecular weight carboxylic acids, small carbonyls and dicarbonyls, and sugar anhydrides. These species have been observed collectively to account for roughly 20-30 percent of the fog DOC. Dicarboxylic acids, frequently used as model compounds for organic CCN, typically account for only a few percent of the organic carbon, with oxalic acid the most important contributor. A significant portion of the fog DOC appears to be comprised of high molecular weight compounds (> 500 Da). Analyses also reveal the presence of organic molecular markers associated with particles produced by various combustion processes. Comparisons of pre-fog and interstitial aerosol samples reveal differences in the relative particle scavenging efficiencies of the fog drops between organic and elemental carbon and between different types of organic carbon. Measurements using a two-stage fog water collector reveal that organic matter tends to be enriched in smaller fog droplets

  13. Where is DNA preserved in soil organic matter?

    NASA Astrophysics Data System (ADS)

    Zaccone, Claudio; Beneduce, Luciano; Plaza, César

    2015-04-01

    Deoxyribonucleic acid (DNA) consists of long chains of alternating sugar and phosphate residues twisted in the form of a helix. Upon decomposition of plant and animal debris, this nucleic acid is released into the soil, where its fate is still not completely understood. In fact, although DNA is one of the organic compounds from living cells that is apparently broken down rapidly in soils, it is also potentially capable of being incorporated in (or interact with) the precursors of humic molecules. In order to track DNA occurrence in soil organic matter (SOM) fractions, an experiment was set up as a randomized complete block design with two factors, namely biochar addition and organic amendment. In particular, biochar (BC), applied at a rate of 20 t/ha, was combined with municipal solid waste compost (BC+MC) at a rate equivalent to 75 kg/ha of potentially available N, and with sewage sludge (BC+SS) at a rate equivalent to 75 kg/ha of potentially available N. Using a physical fractionation method, free SOM located between aggregates (unprotected C pool; FR), SOM occluded within macroaggregates (C pool weakly protected by physical mechanisms; MA), SOM occluded within microaggregates (C pool strongly protected by physical mechanisms; MI), and SOM associated with the mineral fractions (chemically-protected C pool; MIN) were separated from soil samples. DNA was then isolated from each fraction of the two series, as well as from the unamended soil (C) and from the bulk soils (WS), using Powersoil DNA isolation kit (MoBio, CA, USA) with a modified protocol. Data clearly show that the DNA survived the SOM fractionation, thus suggesting that physical fractionation methods create less artifacts compared to the chemical ones. Moreover, in both BC+MC and BC+SS series, most of the isolated DNA was present in the FR fraction, followed by the MA and the MI fractions. No DNA was recovered from the MIN fraction. This finding supports the idea that most of the DNA occurring in the SOM

  14. Analysis of the Organic Matter in Interplanetary Dust Particles: Clues to the Organic Matter in Comets, Asteroids, and Interstellar Grains

    NASA Technical Reports Server (NTRS)

    Flynn, G. J.; Keller, L. P.

    2003-01-01

    Reflection spectroscopy suggests the C- , P-, and D-types of asteroids contain abundant carbon, but these Vis-nearIR spectra are featureless, providing no information on the type(s) of carbonaceous matter. Infrared spectroscopy demonstrates that organic carbon is a significant component in comets and as grains or grain coatings in the interstellar medium. Most of the interplanetary dust particles (IDPs) recovered from the Earth s stratosphere are believed to be fragments from asteroids or comets, thus characterization of the carbon in IDPs provides the opportunity to determine the type(s) and abundance of organic matter in asteroids and comets. Some IDPs exhibit isotopic excesses of D and N-15, indicating the presence of interstellar material. The characterization of the carbon in these IDPs, and particularly any carbon spatially associated with the isotopic anomalies, provides the opportunity to characterize interstellar organic matter.

  15. Aggregation of organic matter by pelagic tunicates

    SciTech Connect

    Pomeroy, L.R.; Deibel, D.

    1980-07-01

    Three genera of pelagic tunicates were fed concentrates of natural seston and an axenic diatom culture. Fresh and up to 4-day-old feces resemble flocculent organic aggregates containing populations of microorganisms, as described from highly productive parts of the ocean, and older feces resemble the nearly sterile flocculent aggregates which are ubiquitous in surface waters. Fresh feces consist of partially digested phytoplankton and other inclusions in an amorphous gelatinous matrix. After 18 to 36 h, a population of large bacteria develops in the matrix and in some of the remains of phytoplankton contained in the feces. From 48 to 96 h, protozoan populations arise which consume the bacteria and sometimes the remains of the phytoplankton in the feces. Thereafter only a sparse population of microorganisms remains, and the particles begin to fragment. Water samples taken in or below dense populations of salps and doliolids contained greater numbers of flocculent aggregates than did samples from adjacent stations.

  16. Search for Organic Matter in Leonid Meteoroids

    NASA Technical Reports Server (NTRS)

    Rairden, Richard L.; Jenniskens, Peter; Laux, Christophe O.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    Near-ultraviolet 300-410 nm spectra of Leonid meteors were obtained in an effort to measure the strong B to X emission band of the radical CN in Leonid meteor spectra at 387 nm. CN is an expected product of ablation of nitrogen containing organic carbon in the meteoroids as well as a possible product of the aerothermochemistry induced by the kinetic energy of the meteor. A slitless spectrograph with objective grating was deployed on FISTA during the 1999 Leonid Multi-Instrument Aircraft Campaign. Fifteen first-order UV spectra were captured near the 02:00 UT meteor storm peak on November 18. It is found that neutral iron lines dominate the spectrum, with no clear sign of the CN band. The meteor plasma contains less than one CN molecule per three Fe atoms at the observed altitude of about 100 km.

  17. Ultrathin organic semiconductor films--soft matter effect.

    PubMed

    Wang, Tong; Yan, Donghang

    2014-05-01

    The growth of organic semiconductor thin films has been a crucial issue in organic electronics, especially the growth at the early stages. The thin-film phase has been found to be a common phenomenon in many organic semiconductor thin films, which is closely related with the weak van der Waals interaction between organic molecules, the long-range interaction between organic molecules and the substrate, as well as the soft matter characteristics of ultrathin films. The growth behavior and soft matter characteristics of the thin-film phase have great effects on thin film morphology and structure, for example, the formation and coalescence of grain boundaries, which further influences the performance of organic electronic devices. The understanding of thin-film phase and its intrinsic quality is necessary for fabricating large-size, highly ordered, continuous and defect-free ultrathin films. This review will focus on the growth behavior of organic ultrathin films, i.e., the level of the first several molecular layers, and provide an overview of the soft matter characteristics. PMID:24548597

  18. Condensed matter physics at surfaces and interfaces of solids

    SciTech Connect

    Mele, E.J.

    1992-01-01

    This research program is focused on structural and elastic properties of crystalline solids and interfaces between solids. We are particularly interested in novel forms of structural ordering and the effects of this ordering on the lattice dynamical properties. We are currently studying structural and vibrational properties of the surfaces of the elemental alkaline earths (particularly Be), and structural phenomena in the doped fullerites.

  19. Effect of influent aeration on removal of organic matter from coffee processing wastewater in constructed wetlands.

    PubMed

    Rossmann, Maike; Matos, Antonio Teixeira; Abreu, Edgar Carneiro; Silva, Fabyano Fonseca; Borges, Alisson Carraro

    2013-10-15

    The aim of the present study was to evaluate the influence of aeration and vegetation on the removal of organic matter in coffee processing wastewater (CPW) treated in 4 constructed wetlands (CWs), characterized as follows: (i) ryegrass (Lolium multiflorum) cultivated system operating with an aerated influent; (ii) non-cultivated system operating with an aerated influent, (iii) ryegrass cultivated system operating with a non-aerated influent; and (iv) non-cultivated system operating with a non-aerated influent. The lowest average chemical oxygen demand (COD), biochemical oxygen demand (BOD) and total suspended solids (TSS) removal efficiencies of 87, 84 and 73%, respectively, were obtained in the ryegrass cultivated system operating with a non-aerated influent. However, ryegrass cultivation did not influence the removal efficiency of organic matter. Artificial aeration of the CPW, prior to its injection in the CW, did not improve the removal efficiencies of organic matter. On other hand it did contribute to increase the instantaneous rate at which the maximum COD removal efficiency was reached. Although aeration did not result in greater organic matter removal efficiencies, it is important to consider the benefits of aeration on the removal of the other compounds. PMID:23892132

  20. The Rusty Sink: Iron Promotes the Preservation of Organic Matter in Sediments

    NASA Astrophysics Data System (ADS)

    Lalonde, K. M.; Mucci, A.; Moritz, A.; Ouellet, A.; Gelinas, Y.

    2011-12-01

    The biogeochemical cycles of iron (Fe) and organic carbon (OC) are strongly interlinked. In oceanic waters, organic ligands have been shown to control the concentration of dissolved Fe [1], whereas in soils, solid Fe phases provide a sheltering and preservative effect for organic matter [2]. Until now however, the role of iron in the preservation of OC in sediments has not been clearly established. Here we show that 21.5 ± 8.6% of the OC in sediments is directly bound to reactive iron phases, which promote the preservation of OC in sediments. Iron-bound OC represents a global mass of 19 to 45 × 10^15 g of OC in surface marine sediments. This pool of OC is different from the rest of sedimentary OC, with 13C and nitrogen-enriched organic matter preferentially bound to Fe which suggests that biochemical fractionation occurs with OC-Fe binding. Preferential binding also affects the recovery of high molecular weight lipid biomarkers and acidic lignin oxidation products, changing the environmental message of proxies derived from these biomarkers. [1] Johnson, K. S., Gordon, R. M. & Coale, K. H. What controls dissolved iron in the world ocean? Marine Chemistry 57, 137-161 (1997). [2] Kaiser, K. & Guggenberger, G. The role of DOM sorption to mineral surfaces in the preservation of organic matter in soils. Organic Geochemistry 31, 711-725 (2000).

  1. Bromination of marine particulate organic matter through oxidative mechanisms

    NASA Astrophysics Data System (ADS)

    Leri, Alessandra C.; Mayer, Lawrence M.; Thornton, Kathleen R.; Ravel, Bruce

    2014-10-01

    Although bromine (Br) is considered conservative in seawater, it exhibits a well established correlation with organic carbon in marine sediments. This carbon-bromine association was recently attributed to covalent bonding, with organobromine in sinking particulates providing a putative link between sedimentary organobromine and organic matter cycling in surface waters. We hypothesized that phytoplankton detritus, a major precursor of sedimentary organic matter, would be susceptible to bromination through oxidative attack. Through a series of model experiments, we demonstrate incorporation of Br into algal particulate detritus through peroxidative and photochemical mechanisms. Peroxidative bromination was enhanced by addition of exogenous bromoperoxidase, but the enzyme was not required for the reaction. Fenton-like reaction conditions also promoted bromination, especially under solar irradiation, implicating radical mechanisms in the euphotic zone as another abiotic source of brominated particulates. These reactions produced aliphatic and aromatic forms of organobromine, suggesting that lipid- and protein-rich components of algal membranes provide suitable substrates for bromination. Biogenic organobromines in certain genera of phytoplankton also appeared in both aliphatic and aromatic forms. Experimental evidence and samples from oceanic midwater sediment traps imply that the aromatic fraction is more stable than the aliphatic. These experiments establish Br as a versatile oxidant in the transformation of planktonic organic matter through both enzymatic and abiotic mechanisms. Organobromine may serve as a marker of oxidative breakdown of marine organic detritus, with the metastable component providing a short-lived indicator of early-stage oxidation. By altering the stability of aliphatic and aromatic moieties, bromination may affect the availability of organic matter to organisms, with consequences for the preservation and degradation of marine organic carbon.

  2. X-ray characterization of solid small molecule organic materials

    SciTech Connect

    Billinge, Simon; Shankland, Kenneth; Shankland, Norman; Florence, Alastair

    2014-06-10

    The present invention provides, inter alia, methods of characterizing a small molecule organic material, e.g., a drug or a drug product. This method includes subjecting the solid small molecule organic material to x-ray total scattering analysis at a short wavelength, collecting data generated thereby, and mathematically transforming the data to provide a refined set of data.

  3. Selective capture of volatile iodine using amorphous molecular organic solids.

    PubMed

    Huang, Pin-Shen; Kuo, Chih-Hong; Hsieh, Chang-Chih; Horng, Yih-Chern

    2012-03-28

    A simple shape-persistent organic molecular container is capable of selective absorption and storage of I(2(g)) over water vapor and NO gas even in its amorphous solid state. In addition, the strongly associated I(2) can be efficiently released from the charged container in organic solvents under ambient conditions. PMID:22331261

  4. Impact of wastewater treatment processes on organic carbon, organic nitrogen, and DBP precursors in effuent organic matter.

    PubMed

    Krasner, Stuart W; Westerhoff, Paul; Chen, Baiyang; Rittmann, Bruce E; Nam, Seong-Nam; Amy, Gary

    2009-04-15

    Unintentional, indirect wastewater reuse often occurs as wastewater treatment plant (WWTP) discharges contaminate receiving waters serving as drinking-water supplies. A survey was conducted at 23 WWTPs that utilized a range of treatment technologies. Samples were analyzed for typical wastewater and drinking-water constituents, chemical characteristics of the dissolved organic matter (DOM), and disinfection byproduct (DBP) precursors present in the effluent organic matter (EfOM). This was the first large-scale assessment of the critical water quality parameters that affect the formation of potential carcinogens during drinking water treatment relative to the discharge of upstream WWTPs. This study considered a large and wide range of variables, including emerging contaminants rarely studied at WWTPs and never before in one study. This paper emphasizesthe profound impact of nitrification on many measures of effluent water quality, from the obvious wastewater parameters (e.g., ammonia, biochemical oxygen demand) to the ones specific to downstream drinking water treatment plants (e.g., formation potentialsfor a diverse group of DBPs of health concern). Complete nitrification reduced the concentration of biodegradable dissolved organic carbon (BDOC) and changed the ratio of BDOC/DOC. Although nitrification reduced ultraviolet absorbance (UVA) at 254 nm, it resulted in an increase in specific UVA (UVA/DOC). This is attributed to preferential removal of the less UV-absorbing (nonhumic) fraction of the DOC during biological treatment. EfOM is composed of hydrophilic and biodegradable DOM, as well as hydrophobic and recalcitrant DOM, whose proportions change with advanced biological treatment. The onset of nitrification yielded lower precursor levels for haloacetic acids and nitrogenous DBPs (haloacetonitriles, N-nitrosodimethylamine). However, trihalomethane precursors were relatively unaffected by the level of wastewater treatment Thus, one design/operations parameter in

  5. The Relationship Between Dissolved Organic Matter Composition and Organic Matter Optical Properties in Freshwaters

    NASA Astrophysics Data System (ADS)

    Aiken, G.; Spencer, R. G.; Butler, K.

    2010-12-01

    Dissolved organic matter (DOM) chemistry and flux are potentially useful, albeit, underutilized, indicators of watershed characteristics, climate influences on watershed hydrology and soils, and changes associated with resource management. Source materials, watershed geochemistry, oxidative processes and hydrology exert strong influences on the nature and reactivity of DOM in aquatic systems. The molecules that comprise DOM, in turn, control a number of environmental processes important for ecosystem function including light penetration and photochemistry, microbial activity, mineral dissolution/precipitation, and the transport and reactivity of hydrophobic compounds and metals (e.g. Hg). In particular, aromatic molecules derived from higher plants exert strong controls on aquatic photochemistry, and on the transport and biogeochemistry of metals. Assessment of DOM composition and transport, therefore, can provide a basis for understanding watershed processes and biogeochemistry of rivers and streams. Here we present results of multi-year studies designed to assess the seasonal and spatial variability of DOM quantity and quality for 57 North American Rivers. DOM concentrations and composition, based on DOM fractionation on XAD resins, ultraviolet (UV)/visible absorption and fluorescence spectroscopic analyses, and specific compound analyses, varied greatly both between sites and seasonally within a given site. DOM in these rivers exhibited a wide range of concentration (<80 to >4000 µM C* L-1) and specific ultra-violet absorbance at 254 nm (SUVA254) (0.6 to 5 L *mg C-1 *m-1), an optical measurement that is an indicator of aromatic carbon content. In almost all systems, UV absorbance measured at specific wavelengths (e.g. 254 nm) correlated strongly with DOM and hydrophobic organic acid (HPOA) content (aquatic humic substances). The relationships between dissolved organic carbon (DOC) concentration and absorbance for the range of systems were quite variable due to

  6. Lyophilization and Reconstitution of Reverse Osmosis Concentrated Natural Organic Matter

    EPA Science Inventory

    Disinfection by-product (DBP) research can be complicated by difficulties in shipping large water quantities and changing natural organic matter (NOM) characteristics over time. To overcome these issues, it is advantageous to have a reliable method for concentrating and preservin...

  7. Forms and Bioavailability of Phosphorus Associated With Natural Organic Matter

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Natural organic matter (NOM) is an important ingredient in soil which can improve physical, chemical, and biological properties of soils and nutrient supplies. In this study, we investigated the spectral features and potential availability of phosphorus (P) in the IHSS Elliott Soil humic acid standa...

  8. Organic Matter Balance: Managing for Soil Protection and Bioenergy Production

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soils are an important natural resource allowing the production of food, feed, fiber and fuel. The growing demand for these services or products requires we protect the soil resource. Many characteristics of high quality soils can be related to the quantity and quality of soil organic matter (organi...

  9. Relating Soil Organic Matter Dynamics to its Molecular Structure

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Our understanding of the dynamics of soil organic matter (SOM) must be integrated with a sound knowledge of it biochemical complexity. The molecular structure of SOM was determined in 98% sand soils to eliminate the known protective effects of clay on the amount and turnover rate of the SOM constitu...

  10. Calculation of the enthalpy of formation of coal organic matter

    SciTech Connect

    A.M. Gyul'maliev; M.Ya. Shpirt

    2008-10-15

    The enthalpy of formation for the organic matter of coals in the coal rank series was calculated from the heat of the complete combustion reaction. Three variants were considered in which the experimental heating values and the values found from the correlation equation or calculated using the Mendeleev formula were taken as the heat of the complete combustion of coals.

  11. SOURCES OF FINE PARTICLE ORGANIC MATTER IN BOISE

    EPA Science Inventory

    Ambient concentrations of fine particle extracted organic matter (EOM) measured at the Elm Grove Park and Fire Station sites in Boise have been apportioned to their two principal sources, woodsmoke and motor vehicle emissions. A multiple linear regression method using lead and po...

  12. Organic matter in a coal ball: Peat or coal?

    USGS Publications Warehouse

    Hatcher, P.G.; Lyons, P.C.; Thompson, C.L.; Brown, F.W.; Maciel, G.E.

    1982-01-01

    Chemical analyses of morphologically preserved organic matter in a Carboniferous coal ball reveal that the material is coalified to a rank approximately equal to that of the surrounding coal. Hence, the plant tissues in the coal ball were chemically altered by coalification processes and were not preserved as peat. Copyright ?? 1982 AAAS.

  13. Photoproduction of Carbon Monoxide from Natural Organic Matter

    EPA Science Inventory

    Pioneering studies by Valentine provided early kinetic results that used carbon monoxide (CO) production to evaluate the photodecomposition of aquatic natural organic matter (NOM) . (ES&T 1993 27 409-412). Comparatively few kinetic studies have been conducted of the photodegradat...

  14. Quenching and Sensitizing Fullerene Photoreactions by Natural Organic Matter

    EPA Science Inventory

    Effects of natural organic matter (NOM) on the photoreaction kinetics of fullerenes (i.e., C60 and fullerenol) were investigated using simulated sunlight and monochromatic radiation (365 nm). NOM from several sources quenched (slowed) the photoreaction of C60 aggregates in water ...

  15. Protection of Organic Matter from Enzyme Degradation by Mineral Mesopores

    NASA Astrophysics Data System (ADS)

    Zimmerman, A. R.; Chorover, J. D.; Brantley, S. L.

    2003-12-01

    Mineral mesopores (2-50 nm diameter) may sequester organic matter (natural and pollutant) and protect it from microbial and fungal enzymatic degradation in soils and sediments. Synthetic mesoporous alumina and silica minerals with uniform pore sizes and shapes were used to test the role of mesopores in protecting organic matter from enzymatic degradation. A model humic compound, L-3-4-dihydroxyphenylalanine (L-DOPA), was sorbed to the internal surfaces of mesoporous alumina (8.2 nm diameter pores) and mesoporous silica (3.4 nm diameter pores) as well as to the external surfaces of nonporous alumina and silica analogues. A fungal derived enzyme, laccase, was added to these sorbate-sorbent pairs in aqueous solution and activity was monitored by oxygen consumption. Though enzyme activity was suppressed in both cases by mineral-enzyme interaction (enzyme inhibition likely due to adsorption of the enzyme), both the rate and total extent of enzyme-mediated degradation of mesopore-sorbed L-DOPA was 3-40 times lower than that of the externally-sorbed analogue. These results provide, for the first time, direct evidence for the viability of the proposed mesopore protection mechanism for the sequestration and preservation of sedimentary organic matter and organic contaminants. Mesopore adsorption/desorption phenomena may also help explain the slow degradation of organic contaminants in soil and sediment and may prove useful as delivery vehicles for organic compounds to agricultural, medical or environmental systems.

  16. CHROMOPHORIC DISSOLVED ORGANIC MATTER (CDOM) DERIVED FROM DECOMPOSITION OF VARIOUS VASCULAR PLANT AND ALGAL SOURCES

    EPA Science Inventory

    Chromophoric dissolved organic (CDOM) in aquatic environments is derived from the microbial decomposition of terrestrial and microbial organic matter. Here we present results of studies of the spectral properties and photoreactivity of the CDOM derived from several organic matter...

  17. Organic and Inorganic Matter in Louisiana Coastal Waters: Vermilion, Atchafalaya, Terrebonne, Barataria, and Mississippi Regions.

    EPA Science Inventory

    Chromophoric dissolved organic matter (CDOM) spectral absorption, dissolved organic carbon (DOC) concentration, and the particulate fraction of inorganic (PIM) and organic matter (POM) were measured in Louisiana coastal waters at Vermilion, Atchafalaya, Terrebonne, Barataria, and...

  18. Transformations of particles, metal elements and natural organic matter in different water treatment processes.

    PubMed

    Yan, Ming-Quan; Wang, Dong-Sheng; Shi, Bao-You; Wei, Qun-Shan; Qu, Jiu-Hui; Tang, Hong-Xiao

    2007-01-01

    Characterizing natural organic matter (NOM), particles and elements in different water treatment processes can give a useful information to optimize water treatment operations. In this article, transformations of particles, metal elements and NOM in a pilot-scale water treatment plant were investigated by laser light granularity system, particle counter, glass-fiber membrane filtration, inductively coupled plasma-optical emission spectroscopy, ultra filtration and resin absorbents fractionation. The results showed that particles, NOM and trihalomethane formation precursors were removed synergistically by sequential treatment of different processes. Pre-ozonation markedly changed the polarity and molecular weight of NOM, and it could be conducive to the following coagulation process through destabilizing particles and colloids; mid-ozonation enhanced the subsequent granular activated carbon (GAC) filtration process by decreasing molecular weight of organic matters. Coagulation-flotation and GAC were more efficient in removing fixed suspended solids and larger particles; while sand-filtration was more efficient in removing volatile suspended solids and smaller particles. Flotation performed better than sedimentation in terms of particle and NOM removal. The type of coagulant could greatly affect the performance of coagulation-flotation. Pre-hydrolyzed composite coagulant (HPAC) was superior to FeCl3 concerning the removals of hydrophobic dissolved organic carbon and volatile suspended solids. The leakages of flocs from sand-filtration and microorganisms from GAC should be mitigated to ensure the reliability of the whole treatment system. PMID:17918586

  19. Characterization of water-soluble organic matter isolated from atmospheric fine aerosol

    NASA Astrophysics Data System (ADS)

    Kiss, Gyula; Varga, BáLint; Galambos, IstváN.; Ganszky, Ildikó

    2002-11-01

    Atmospheric fine aerosol (dp < 1.5 μm) was collected at a rural site in Hungary from January to September 2000. The total carbon concentration ranged from 5 to 13 μg m-3 and from 3 to 6 μg m-3 in the first three months and the rest of the sampling period, respectively. On average, water-soluble organic carbon (WSOC) accounted for 66% of the total carbon concentration independent of the season. A variable fraction of the water-soluble organic constituents (38-72% of WSOC depending on the sample) was separated from inorganic ions and isolated in pure organic form by using solid phase extraction on a copolymer sorbent. This fraction was experimentally characterized by an organic matter to organic carbon mass ratio of 1.9, and this value did not change with the seasons. Furthermore, the average elemental composition (molar ratio) of C:H:N:O ≈ 24:34:1:14 of the isolated fraction indicated the predominance of oxygenated functional groups, and the low hydrogen to carbon ratio implied the presence of unsaturated or polyconjugated structures. These conclusions were confirmed by UV, fluorescence, and Fourier transform infrared (FTIR) studies. On the basis of theoretical considerations, the organic matter to organic carbon mass ratio was estimated to be 2.3 for the nonisolated water-soluble organic fraction, resulting in an overall ratio of 2.1 for the WSOC. In order to extend the scope of this estimation to the total organic carbon, which is usually required in mass closure calculations, the aqueous extraction was followed by sequential extraction with acetone and 0.01 M NaOH solution. As a result, a total organic matter to total organic carbon mass ratio of 1.9-2.0 was estimated, but largely on the basis of experimental data.

  20. Colored dissolved organic matter in Tampa Bay, Florida

    USGS Publications Warehouse

    Chen, Z.; Hu, C.; Conmy, R.N.; Muller-Karger, F.; Swarzenski, P.

    2007-01-01

    Absorption and fluorescence of colored dissolved organic matter (CDOM) and concentrations of dissolved organic carbon (DOC), chlorophyll and total suspended solids in Tampa Bay and its adjacent rivers were examined in June and October of 2004. Except in Old Tampa Bay (OTB), the spatial distribution of CDOM showed a conservative relationship with salinity in June, 2004 (aCDOM(400) = − 0.19 × salinity + 6.78, R2 = 0.98, n = 17, salinity range = 1.1–32.5) with little variations in absorption spectral slope and fluorescence efficiency. This indicates that CDOM distribution was dominated by mixing. In October, 2004, CDOM distribution was nonconservative with an average absorption coefficient (aCDOM(400), ∼ 7.76 m-1) about seven times higher than that in June (∼ 1.11 m-1). The nonconservative behavior was caused largely by CDOM removal at intermediate salinities (e.g., aCDOM(400) removal > 15% at salinity ∼ 13.0), which likely resulted from photobleaching due to stronger stratification. The spatial and seasonal distributions of CDOM in Tampa Bay showed that the two largest rivers, the Alafia River (AR) and Hillsborough River (HR) were dominant CDOM sources to most of the bay. In OTB, however, CDOM showed distinctive differences: lower absorption coefficient, higher absorption spectral slopes, and lower ratios of CDOM absorption to DOC and higher fluorescence efficiency. These differences may have stemmed from (1) changes in CDOM composition by more intensive photobleaching due to the longer residence time of water mass in OTB; (2) other sources of CDOM than the HR/AR inputs, such as local creeks, streams, groundwater, and/or bottom re-suspension. Average CDOM absorption in Tampa Bay at 443 nm, aCDOM(443), was about five times higher in June and about ten times higher in October than phytoplankton pigment absorption, aph(443), indicating that blue light attenuation in the water column was dominated by CDOM rather than by phytoplankton absorption throughout the

  1. Bacterial biomarkers thermally released from dissolved organic matter

    USGS Publications Warehouse

    Greenwood, P.F.; Leenheer, J.A.; McIntyre, C.; Berwick, L.; Franzmann, P.D.

    2006-01-01

    Hopane biomarker products were detected using microscale sealed vessel (MSSV) pyrolysis gas chromatography-mass spectrometry (GC-MS) analysis of dissolved organic matter from natural aquatic systems colonised by bacterial populations. MSSV pyrolysis can reduce the polyhydroxylated alkyl side chain of bacteriohopanepolyols, yielding saturated hopane products which are more amenable to GC-MS detection than their functionalised precursors. This example demonstrates how the thermal conditions of MSSV pyrolysis can reduce the biologically-inherited structural functionality of naturally occurring organic matter such that additional structural fragments can be detected using GC methods. This approach complements traditional analytical pyrolysis methods by providing additional speciation information useful for establishing the structures and source inputs of recent or extant organic material. ?? 2006.

  2. Pre-biotic organic matter from comets and asteroids

    NASA Technical Reports Server (NTRS)

    Anders, Edward

    1989-01-01

    Only meteoritic fragments small enough to be gently decelerated by the atmosphere (10 to the -12th g to 10 to the -6th g) can deliver organic matter intact. The amount of such 'soft-landed' organic carbon can be estimated from data for the infall rate of meteoritic matter. At present rates, only about 0.0006 g/sq cm intact organic carbon would accumulate in 100 million years, but at the higher rates of about four billion yr ago, about 20 g/sq cm may have accumulated in the few hundred million years between the last cataclysmic impact and the beginning of life. It may have included some biologically important compounds that did not form by abiotic synthesis on earth.

  3. Evalution of soil organic matter contents using spectral inhance indeces

    NASA Astrophysics Data System (ADS)

    Faghih, Athar; Heidari, Ahmad

    2010-05-01

    Topography composed of elevation, slope, and aspect, that through the influence microclimate and chemical and physical properties of land affects the amount of organic carbon. Because of the height difference between hydrology and temperature regime in mountainous regions are collaborating and that difference has led to differences in the composition and distribution patterns of vegetation, the soil and organic matter decomposition rate is. Effect of climate change on soil organic carbon storage and its distribution is different in different regions, and the main factors creating differences, temperature and rainfall levels are on the order and the growth rate plant species and organic carbon mineralization rate impact.to evaluate these factors first ETM+ satellite images of 2002 North range lands, Karaj river basin prepared, then image processing and image classification as supervision and unsupervision was done. Then NDVI, TNDVI, VI, IR/R, Square IR/R indices obtained for study area and on the basis of these indices study area units was specified. Digital elevation model (DEM) using the region as a 1:50000 topographic map was produced before. Using Arc- GIS image and maps physiographic, location sampling based physiographic units changes and temperature change with the opposite slope directions sample have been made. By using GPS, 24 positions for surface samples and 4 pedons determined and sampled. Physical and chemical sample properties have based on size and by using dry sieve and OC, N and C/N ratio respectively specified in them. Then, using Exel software existing relationships between different parameters were studied. The results showed that, with increases. In the slope of the north and west due to the ability to maintain more moisture, have organic matter, more than the southern and eastern slopes. Correlation coefficients obtained included: correlation coefficient between organic matter and elevation 0.84, correlation coefficient between organic matter

  4. Correlation between Organic Matter Degradation and the Rheological Performance of Waste Sludge During Anaerobic Digestion

    NASA Astrophysics Data System (ADS)

    Morel, Evangelina S.; Hernández-Hernándes, José A.; Méndez-Contreras, Juan M.; Cantú-Lozano, Denis

    2008-07-01

    Anaerobic digestion has demonstrated to be a good possibility to reduce the organic matter contents in waste activated sludge resulting in the effluents treatment. An anaerobic digestion was carried out in a 3.5 L reactor at 35 °C for a period of 20 days. An electronic thermostat controlled the temperature. The reactor was agitated at a rate of 200 rpm. The study of the rheological behavior of the waste activated sludge was done with an Anton Paar™ rheometer model MCR301 with a peltier plate for temperature control. Four-blade vane geometry was used with samples of 37 mL for determining rheological properties. Sampling (two samples) was taken every four days of anaerobic digestion through a peristaltic pump. The samples behavior was characterized by the Herschel-Bulkley model, with R2>0.99 for most cases. In all samples were found an apparent viscosity (ηap) and yield stress (τo) decrement when organic matter content diminishes. This demonstrates a relationship between rheological properties and organic matter concentration (% volatile solids). Also the flow activation energy (Ea) was calculated using the Ahrrenius correlation and samples of waste activated sludge before anaerobic digestion. In this case, samples were run in the rheometer at 200 rpm and a temperature range of 25 to 75 °C with an increment rate of 2 °C per minute. The yield stress observed was in a range of 0.93-0.18 Pa, the apparent viscosity was in a range of 0.0358-0.0010 Pa.s, the reduction of organic matter was in a range of 62.57-58.43% volatile solids and the average flow activation energy was 1.71 Calṡg-mol-1.

  5. Efficient removal of recalcitrant deep-ocean dissolved organic matter during hydrothermal circulation

    NASA Astrophysics Data System (ADS)

    Hawkes, Jeffrey A.; Rossel, Pamela E.; Stubbins, Aron; Butterfield, David; Connelly, Douglas P.; Achterberg, Eric P.; Koschinsky, Andrea; Chavagnac, Valérie; Hansen, Christian T.; Bach, Wolfgang; Dittmar, Thorsten

    2015-11-01

    Oceanic dissolved organic carbon (DOC) is an important carbon pool, similar in magnitude to atmospheric CO2, but the fate of its oldest forms is not well understood. Hot hydrothermal circulation may facilitate the degradation of otherwise un-reactive dissolved organic matter, playing an important role in the long-term global carbon cycle. The oldest, most recalcitrant forms of DOC, which make up most of oceanic DOC, can be recovered by solid-phase extraction. Here we present measurements of solid-phase extractable DOC from samples collected between 2009 and 2013 at seven vent sites in the Atlantic, Pacific and Southern oceans, along with magnesium concentrations, a conservative tracer of water circulation through hydrothermal systems. We find that magnesium and solid-phase extractable DOC concentrations are correlated, suggesting that solid-phase extractable DOC is almost entirely lost from solution through mineralization or deposition during circulation through hydrothermal vents with fluid temperatures of 212-401 °C. In laboratory experiments, where we heated samples to 380 °C for four days, we found a similar removal efficiency. We conclude that thermal degradation alone can account for the loss of solid-phase extractable DOC in natural hydrothermal systems, and that its maximum lifetime is constrained by the timescale of hydrothermal cycling, at about 40 million years.

  6. Loss of organic matter from riverine particles in deltas

    SciTech Connect

    Keil, R.G.; Quay, P.D.; Richey, J.E.

    1997-04-01

    In order to examine the transport and burial of terrigenous organic matter along the coastal zones of large river systems, we assessed organic matter dynamics in coupled river/delta systems using mineral surface area as a conservative tracer for discharged riverine particulate organic matter (POM). Most POM in the rivers studied (n = 6) is tightly associated with suspended mineral materiaL e.g., it is sorbed to mineral surfaces. Average organic loadings in the Amazon River (0.67 - 0.14 Mg C m{sup -2}), the river for which we have the largest dataset, are approximately twice that of sedimentary minerals from the Amazon Delta (-0.35 mg C m{sup -2}). Stable carbon isotope analysis indicate that approximately two-thirds of the total carbon on the deltaic particles is terrestrial. The combined surface-normalized, isotope-distinguished estimate is that >70% of the Amazon fluvial POM is not buried in the delta consistent with other independent evidence. Losses of terrestrial POM have also been quantified for the river/delta systems of Columbia in the USA, Fly in New Guinea. and Huange-He in China. If the losses of riverine POM observed in these river/delta systems are representative of rivers worldwide, then the surface-constrained analyses point toward a global loss of fluvial POM in delta regions of {approximately}0.1 x 10{sup 15} g C y{sup -1}. 28 refs., 2 figs., 1 tab.

  7. Rare earth elements and neodymium isotopes in sedimentary organic matter

    NASA Astrophysics Data System (ADS)

    Freslon, Nicolas; Bayon, Germain; Toucanne, Samuel; Bermell, Sylvain; Bollinger, Claire; Chéron, Sandrine; Etoubleau, Joel; Germain, Yoan; Khripounoff, Alexis; Ponzevera, Emmanuel; Rouget, Marie-Laure

    2014-09-01

    We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n = 25), estuaries (n = 18), open-ocean settings (n = 15), and cold seeps (n = 12). Sedimentary organic matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2-0.02 M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25 M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H2O2 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n = 58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n = 12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea-water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter

  8. Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction

    NASA Astrophysics Data System (ADS)

    Schmidt, Frauke; Koch, Boris P.; Witt, Matthias; Hinrichs, Kai-Uwe

    2014-09-01

    Dissolved organic matter (DOM) in marine sediments is a complex mixture of thousands of individual constituents that participate in biogeochemical reactions and serve as substrates for benthic microbes. Knowledge of the molecular composition of DOM is a prerequisite for a comprehensive understanding of the biogeochemical processes in sediments. In this study, interstitial water DOM was extracted with Rhizon samplers from a sediment core from the Black Sea and compared to the corresponding water-extractable organic matter fraction (<0.4 μm) obtained by Soxhlet extraction, which mobilizes labile particulate organic matter and DOM. After solid phase extraction (SPE) of DOM, samples were analyzed for the molecular composition by Fourier Transform Ion-Cyclotron Resonance Mass Spectrometry (FT-ICR MS) with electrospray ionization in negative ion mode. The average SPE extraction yield of the dissolved organic carbon (DOC) in interstitial water was 63%, whereas less than 30% of the DOC in Soxhlet-extracted organic matter was recovered. Nevertheless, Soxhlet extraction yielded up to 4.35% of the total sedimentary organic carbon, which is more than 30-times the organic carbon content of the interstitial water. While interstitial water DOM consisted primarily of carbon-, hydrogen- and oxygen-bearing compounds, Soxhlet extracts yielded more complex FT-ICR mass spectra with more peaks and higher abundances of nitrogen- and sulfur-bearing compounds. The molecular composition of both sample types was affected by the geochemical conditions in the sediment; elevated concentrations of HS- promoted the early diagenetic sulfurization of organic matter. The Soxhlet extracts from shallow sediment contained specific three- and four-nitrogen-bearing molecular formulas that were also detected in bacterial cell extracts and presumably represent proteinaceous molecules. These compounds decreased with increasing sediment depth while one- and two-nitrogen-bearing molecules increased

  9. Synthesis of refractory organic matter in the ionized gas phase of the solar nebula

    PubMed Central

    Kuga, Maïa; Marty, Bernard; Marrocchi, Yves; Tissandier, Laurent

    2015-01-01

    In the nascent solar system, primitive organic matter was a major contributor of volatile elements to planetary bodies, and could have played a key role in the development of the biosphere. However, the origin of primitive organics is poorly understood. Most scenarios advocate cold synthesis in the interstellar medium or in the outer solar system. Here, we report the synthesis of solid organics under ionizing conditions in a plasma setup from gas mixtures (H2(O)−CO−N2−noble gases) reminiscent of the protosolar nebula composition. Ionization of the gas phase was achieved at temperatures up to 1,000 K. Synthesized solid compounds share chemical and structural features with chondritic organics, and noble gases trapped during the experiments reproduce the elemental and isotopic fractionations observed in primitive organics. These results strongly suggest that both the formation of chondritic refractory organics and the trapping of noble gases took place simultaneously in the ionized areas of the protoplanetary disk, via photon- and/or electron-driven reactions and processing. Thus, synthesis of primitive organics might not have required a cold environment and could have occurred anywhere the disk is ionized, including in its warm regions. This scenario also supports N2 photodissociation as the cause of the large nitrogen isotopic range in the solar system. PMID:26039983

  10. Synthesis of refractory organic matter in the ionized gas phase of the solar nebula.

    PubMed

    Kuga, Maïa; Marty, Bernard; Marrocchi, Yves; Tissandier, Laurent

    2015-06-01

    In the nascent solar system, primitive organic matter was a major contributor of volatile elements to planetary bodies, and could have played a key role in the development of the biosphere. However, the origin of primitive organics is poorly understood. Most scenarios advocate cold synthesis in the interstellar medium or in the outer solar system. Here, we report the synthesis of solid organics under ionizing conditions in a plasma setup from gas mixtures (H2(O)-CO-N2-noble gases) reminiscent of the protosolar nebula composition. Ionization of the gas phase was achieved at temperatures up to 1,000 K. Synthesized solid compounds share chemical and structural features with chondritic organics, and noble gases trapped during the experiments reproduce the elemental and isotopic fractionations observed in primitive organics. These results strongly suggest that both the formation of chondritic refractory organics and the trapping of noble gases took place simultaneously in the ionized areas of the protoplanetary disk, via photon- and/or electron-driven reactions and processing. Thus, synthesis of primitive organics might not have required a cold environment and could have occurred anywhere the disk is ionized, including in its warm regions. This scenario also supports N2 photodissociation as the cause of the large nitrogen isotopic range in the solar system. PMID:26039983