Science.gov

Sample records for pattern generator development

  1. The Development of Group Interaction Patterns: How Groups become Adaptive, Generative, and Transformative Learners

    ERIC Educational Resources Information Center

    London, Manuel; Sessa, Valerie I.

    2007-01-01

    This article integrates the literature on group interaction process analysis and group learning, providing a framework for understanding how patterns of interaction develop. The model proposes how adaptive, generative, and transformative learning processes evolve and vary in their functionality. Environmental triggers for learning, the group's…

  2. Resolution improvement and pattern generator development for the maskless micro-ion-beam reduction lithography system

    NASA Astrophysics Data System (ADS)

    Jiang, Ximan

    have been studied. The dependence of the throughput with the exposure field size and the speed of the mechanical stage has been investigated. In order to perform maskless lithography, different micro-fabricated pattern generators have been developed for the MMRL system. Ion beamlet switching has been successfully demonstrated on the MMRL system. A positive bias voltage around 10 volts is sufficient to switch off the ion current on the micro-fabricated pattern generators. Some unexpected problems, such as the high-energy secondary electron radiations, have been discovered during the experimental investigation. Thermal and structural analysis indicates that the aperture displacement error induced by thermal expansion can satisfy the 3delta CD requirement for lithography nodes down to 25 nm. The cross-talking effect near the surface and inside the apertures of the pattern generator has been simulated in a 3-D ray-tracing code. New pattern generator design has been proposed to reduce the cross-talking effect. In order to eliminate the surface charging effect caused by the secondary electrons, a new beam-switching scheme in which the switching electrodes are immersed in the plasma has been demonstrated on a mechanically fabricated pattern generator.

  3. Development of a morphing structure with the incorporation of central pattern generators

    NASA Astrophysics Data System (ADS)

    Bliss, Thomas K.; Bart-Smith, Hilary; Iwasaki, Tetsuya

    2006-03-01

    The Manta Ray, Manta birostris, is an amazing creature, propelling itself through the water with the elegant and complex flapping of its wings. Achieving outstanding efficiencies, engineers are looking for ways to mimic its flight through the water and harness its propulsive techniques. This study combines two biologically inspired aspects to achieve this goal: morphing structures actuated with a biomimetic neural network control system. It is believed that this combination will prove capable of producing the oscillatory motions necessary for locomotion. In this paper, a four-truss structure with three actuators is chosen and its performance capabilities are analyzed. A synthetic central pattern generator, which provides the fundamental control mechanisms for rhythmic motion in animals, is designed to realize an oscillatory control of the three actuators. The control system is simulated using Matlab, then combined with LabVIEW to control the four-truss structure. The system's performance is analyzed, with specific attention to both transient and steady-state behavior.

  4. The fictively breathing tadpole brainstem preparation as a model for the development of respiratory pattern generation and central chemoreception.

    PubMed

    Gdovin, M J; Torgerson, C S; Remmers, J E

    1999-11-01

    Spontaneous high-frequency, low-amplitude and low-frequency, high-amplitude efferent bursting patterns of cranial and spinal motor nerve activity in the in vitro brainstem preparation of the bullfrog tadpole Rana catesbeiana have been characterized as fictive gill and lung ventilation, respectively (Gdovin MJ, Torgerson CS, Remmers JE). Characterization of gill and lung ventilatory activity in cranial nerves in the spontaneously breathing tadpole Rana catesbeiana, FASEB J 1996;10(3):A642; Gdovin MJ, Torgerson CS, Remmers JE. Neurorespiratory pattern of gill and lung ventilation in the decerebrate spontaneously breathing tadpole, Respir Physiol 1998;113:135 146; Pack AI, Galante RJ, Walker RE, Kubin LK, Fishman AP. Comparative approach to neural control of respiration, In: Speck DF, Dekin MS, Revelette WR, Frazier DT, editors. Respiratory Control Central and Peripheral Mechanisms. Lexington: University of Kentucky Press, 1993:52-57). In addition, the ontogenetic dependence of central respiratory chemoreceptor stimulation on fictive gill and lung ventilation has been previously described (Torgerson CS, Gdovin MJ, Remmers JE. Fictive gill and lung ventilation in the pre- and post-metamorphic tadpole brainstem, J Neurophysiol 1998, in press). To investigate the neural substrates responsible for central respiratory rhythm generation of gill and lung ventilation in the developing tadpole, we recorded efferent activities of cranial nerve (CN) V, VII, and X and spinal nerve (SN) II during changes in superfusate PCO2 before and after multiple transection of the in vitro brainstem. The brainstem was transected between CN VIII and IX and the response to changes in PCO2 was recorded. A second transection was then made between the caudal margin of CN X and rostral to SN II. Preliminary data reveal that robust gill ventilation was recorded consistently only if the segment of brainstem included CN X, whereas the loci capable of eliciting fictive lung bursting patterns appeared to

  5. Development of a diurnal rainfall pattern generator and assessment of climate change impact on flood risk in Japan

    NASA Astrophysics Data System (ADS)

    Minakawa, H.; Masumoto, T.

    2011-12-01

    An increase in flood risk, especially in low-lying areas, is predicted as a consequence of global climate change. Immediate measures are needed to minimize the damage caused by more-frequent flooding. The capacities of drainage systems in paddy areas are planned on the basis of design rainfall. For example, design rainfall may be represented by a 3-day rainfall event with a 10-year return period. However, design rainfall parameters used in Japan have not been reviewed for a few decades, and changes in rainfall patterns associated with recent climate change are not reflected in current drainage planning. The aim of this study was to develop a diurnal rainfall pattern generator and to use it to evaluate the effects of changing patterns of heavy rainfall due to climate change on flood risk in low-lying areas. Our study area was in the Kaga three-lagoon basin in Ishikawa Prefecture, Japan. There are two lagoons in the study area, and the low-lying paddy areas extend over about 4,000 ha in the lower reaches of the basin. First, we developed a drainage analysis model that incorporates kinematic and diffusive runoff models for upland and inundated areas, respectively. The model was adjusted in accordance with observed discharges and water levels for heavy rainfall events. Next, the rainfall data predicted by MIROC (a Global Climate Model developed by the Center for Climate Systems Research) were analyzed to determine the future trends of changes of heavy rainfall. Our analysis showed that probabilistic 3-day rainfall would increase in the future. In particular, 3-day rainfall events with a 10-year return period were calculated to increase from about 220 mm/3d at present to about 270 mm/3d in the future. These amounts of rainfall were used to represent the future trend of increases of heavy rainfall. Simultaneously, we developed a diurnal rainfall pattern generator based on a Monte Carlo simulation method. For this generator, the beta distribution was used to disaggregate

  6. Resolution Improvement and Pattern Generator Development for theMaskless Micro-Ion-Beam Reduction Lithography System

    SciTech Connect

    Jiang, Ximan

    2006-05-18

    have been studied. The dependence of the throughput with the exposure field size and the speed of the mechanical stage has been investigated. In order to perform maskless lithography, different micro-fabricated pattern generators have been developed for the MMRL system. Ion beamlet switching has been successfully demonstrated on the MMRL system. A positive bias voltage around 10 volts is sufficient to switch off the ion current on the micro-fabricated pattern generators. Some unexpected problems, such as the high-energy secondary electron radiations, have been discovered during the experimental investigation. Thermal and structural analysis indicates that the aperture displacement error induced by thermal expansion can satisfy the 3{delta} CD requirement for lithography nodes down to 25 nm. The cross-talking effect near the surface and inside the apertures of the pattern generator has been simulated in a 3-D ray-tracing code. New pattern generator design has been proposed to reduce the cross-talking effect. In order to eliminate the surface charging effect caused by the secondary electrons, a new beam-switching scheme in which the switching electrodes are immersed in the plasma has been demonstrated on a mechanically fabricated pattern generator.

  7. Preclinical evidence supporting the clinical development of central pattern generator-modulating therapies for chronic spinal cord-injured patients

    PubMed Central

    2014-01-01

    Ambulation or walking is one of the main gaits of locomotion. In terrestrial animals, it may be defined as a series of rhythmic and bilaterally coordinated movement of the limbs which creates a forward movement of the body. This applies regardless of the number of limbs—from arthropods with six or more limbs to bipedal primates. These fundamental similarities among species may explain why comparable neural systems and cellular properties have been found, thus far, to control in similar ways locomotor rhythm generation in most animal models. The aim of this article is to provide a comprehensive review of the known structural and functional features associated with central nervous system (CNS) networks that are involved in the control of ambulation and other stereotyped motor patterns—specifically Central Pattern Generators (CPGs) that produce basic rhythmic patterned outputs for locomotion, micturition, ejaculation, and defecation. Although there is compelling evidence of their existence in humans, CPGs have been most studied in reduced models including in vitro isolated preparations, genetically-engineered mice and spinal cord-transected animals. Compared with other structures of the CNS, the spinal cord is generally considered as being well-preserved phylogenetically. As such, most animal models of spinal cord-injured (SCI) should be considered as valuable tools for the development of novel pharmacological strategies aimed at modulating spinal activity and restoring corresponding functions in chronic SCI patients. PMID:24910602

  8. Mask pattern generator employing EPL technology

    NASA Astrophysics Data System (ADS)

    Yoshioka, Nobuyuki; Yamabe, Masaki; Wakamiya, Wataru; Endo, Nobuhiro

    2003-08-01

    Mask cost is one of crucial issues in device fabrication, especially in SoC (System on a Chip) with small-volume production. The cost mainly depends on productivity of mask manufacturing tools such as mask writers and defect inspection tools. EPL (Electron Projection Lithography) has been developing as a high-throughput electron beam exposure technology that will succeed optical lithography. The application of EPL technology to mask writing will result in high productivity and contribute to decrease the mask cost. The concept of a mask pattern generator employing EPL technology is proposed in this paper. It is very similar to EPL technology used for pattern printing on a wafer. The mask patterns on the glass substrate are exposed by projecting the basic circuit patterns formed on the mother EPL mask. One example of the mother EPL mask is a stencil type made with 200-mm Si wafer. The basic circuit patterns are IP patterns and logical primitive patterns such as cell libraries (AND, OR, Inverter, Flip-Flop and etc.) to express the SoC device patterns. Since the SoC patterns are exposed with its collective units such as IP and logical primitive patterns by using this method, the high throughput will be expected comparing with conventional mask E-beam writers. In this paper, the mask pattern generator with the EPL technology is proposed. The concept, its advantages and issues to be solved are discussed.

  9. Optical Pattern Generator Using Excimer Laser

    NASA Astrophysics Data System (ADS)

    Hafner, Bernhard F.

    1988-01-01

    Reticles (masks on enlarged scale) are needed for optical pattern transfer in the production of integrated semiconductor circuits. In order to meet present requirements for 5X reticles only a direct writing technique is feasible. This means direct exposing of photoresist either with light or an electron beam. Many of todays highly dense reticles require some 10 5 to 10 6 discrete exposures when generated with an optical pattern generator. Optical pattern generators normally use mercury arc lamps to expose positive photoresist, which in turn need 200 milliseconds for each of these discrete exposures, thus requiring to stop the table at every exposure position ("stop and go" mode). This results in running times of several days per reticle. Therefore most reticles are nowadays being manufactured with very expensive e-beam machines. In the early 80's we started the first experiments to expose photoresist with an excimer laser. In order to obtain the maximum gain in speed, the goal was to operate with only one excimer laser pulse per exposure, so that a fast "flash on the fly" operation with an optical pattern generator became true. Equipping a conventional optical pattern generator with an excimer laser as the light source, it has become possible to expose substrates coated with standard photoresist in the "flash on the fly" mode with only 13 nanoseconds per flash. So the thruput could be increased up to 25 times in comparison to a pattern generator equipped with a mercury lamp. A comparison of both operation modes will show that an immense increase of speed is possible, even when a ten years old M3600 pattern generator is used. This system is in function now with very high reliability since more than three years in our IC development line.

  10. Patterns of Gender Development

    PubMed Central

    Martin, Carol Lynn; Ruble, Diane N.

    2013-01-01

    A comprehensive theory of gender development must describe and explain long-term developmental patterning and changes and how gender is experienced in the short term. This review considers multiple views on gender patterning, illustrated with contemporary research. First, because developmental research involves understanding normative patterns of change with age, several theoretically important topics illustrate gender development: how children come to recognize gender distinctions and understand stereotypes, and the emergence of prejudice and sexism. Second, developmental researchers study the stability of individual differences over time, which elucidates developmental processes. We review stability in two domains—sex segregation and activities/interests. Finally, a new approach advances understanding of developmental patterns, based on dynamic systems theory. Dynamic systems theory is a metatheoretical framework for studying stability and change, which developed from the study of complex and nonlinear systems in physics and mathematics. Some major features and examples show how dynamic approaches have been and could be applied in studying gender development. PMID:19575615

  11. Intersecting Circuits Generate Precisely Patterned Retinal Waves

    PubMed Central

    Akrouh, Alejandro; Kerschensteiner, Daniel

    2013-01-01

    SUMMARY The developing retina generates spontaneous glutamatergic (stage III) waves of activity that sequentially recruit neighboring ganglion cells with opposite light responses (ON and OFF RGCs). This activity pattern is thought to help establish parallel ON and OFF pathways in downstream visual areas. The circuits that produce stage III waves and desynchronize ON and OFF RGC firing remain obscure. Using dual patch clamp recordings, we find that ON and OFF RGCs receive sequential excitatory input from ON and OFF cone bipolar cells (CBCs), respectively. This input sequence is generated by crossover circuits, in which ON CBCs control glutamate release from OFF CBCs via diffusely stratified inhibitory amacrine cells. In addition, neighboring ON CBCs communicate directly and indirectly through lateral glutamatergic transmission and gap junctions, both of which are required for wave initiation and propagation. Thus, intersecting lateral excitatory and vertical inhibitory circuits give rise to precisely patterned stage III retinal waves. PMID:23830830

  12. Automatically generating extraction patterns from untagged text

    SciTech Connect

    Riloff, E.

    1996-12-31

    Many corpus-based natural language processing systems rely on text corpora that have been manually annotated with syntactic or semantic tags. In particular, all previous dictionary construction systems for information extraction have used an annotated training corpus or some form of annotated input. We have developed a system called AutoSlog-TS that creates dictionaries of extraction patterns using only untagged text. AutoSlog-TS is based on the AutoSlog system, which generated extraction patterns using annotated text and a set of heuristic rules. By adapting AutoSlog and combining it with statistical techniques, we eliminated its dependency on tagged text. In experiments with the MUC-4 terrorism domain, AutoSlog-TS created a dictionary of extraction patterns that performed comparably to a dictionary created by AutoSlog, using only preclassified texts as input.

  13. Retraction Notice: Generation of Knock down Tools for Transcription Factor 7-like-2 (TCF7L2) and Evaluation of its Expression Pattern in Developing Chicken Optic Tectum.

    PubMed

    2016-01-01

    The publishers have decided to retract the manuscript entitled "Generation of Knock Down Tools for Transcription Factor 7-Like-2 (TCF7L2) and Evaluation of its Expression Pattern in Developing Chicken Optic Tectum" published in MicroRNA, volume 4, issue 3, page numbers 209-216, 2015, for the following reasons. • Due to conflict of interests between authors and the Principal Investigator. PMID:26861895

  14. Apparatus for generating nonlinear pulse patterns

    DOEpatents

    Nakamura, Michiyuki

    1981-01-01

    Apparatus for generating a plurality of nonlinear pulse patterns from a single linear pulse pattern. A first counter counts the pulses of the linear pulse pattern and a second counter counts the pulses of the nonlinear pulse pattern. A comparator compares the counts of both counters, and in response to an equal count, a gate is enabled to gate a pulse of the linear pattern as a pulse of the nonlinear pattern, the latter also resetting the first counter. Presettable dividers divide the pulses of each pattern before they are counted by the respective counters. Also, apparatus for generating a logarithmic pulse pattern from a linear pulse pattern to any log base. In one embodiment, a shift register is used in place of the second counter to be clocked by each pulse of the logarithmic pattern to generate the pattern. In another embodiment, a memory stores the logarithmic pattern and is addressed by the second counter which is clocked by the pulses of the logarithmic pulse pattern.

  15. Apparatus for generating nonlinear pulse patterns

    DOEpatents

    Nakamura, N.M.I.

    Apparatus for generating a plurality of nonlinear pulse patterns from a single linear pulse pattern. A first counter counts the pulses of the linear pulse pattern and a second counter counts the pulses of the nonlinear pulse pattern. A comparator compares the counts of both counters, and in response to an equal count, a gate is enabled to gate a pulse of the linear pattern as a pulse of the nonlinear pattern, the latter also resetting the first counter. Presettable dividers divide the pulses of each pattern before they are counted by the respective counters. Apparatus for generating a logarithmic pulse pattern from a linear pulse pattern to any log base is described. In one embodiment, a shift register is used in place of the second counter to be clocked by each pulse of the logarithmic pattern to generate the pattern. In another embodiment, a memory stores the logarithmic pattern and is addressed by the second counter which is clocked by the pulses of the logarithmic pulse pattern.

  16. Patterning techniques for next generation IC's

    NASA Astrophysics Data System (ADS)

    Balasinski, A.

    2007-12-01

    Reduction of linear critical dimensions (CDs) beyond 45 nm would require significant increase of the complexity of pattern definition process. In this work, we discuss the key successor methodology to the current optical lithography, the Double Patterning Technique (DPT). We compare the complexity of CAD solutions, fab equipment, and wafer processing with its competitors, such as the nanoimprint (NIL) and the extreme UV (EUV) techniques. We also look ahead to the market availability for the product families enabled using the novel patterning solutions. DPT is often recognized as the most viable next generation lithography as it utilizes the existing equipment and processes and is considered a stop-gap solution before the advanced NIL or EUV equipment is developed. Using design for manufacturability (DfM) rules, DPT can drive the k1 factor down to 0.13. However, it faces a variety of challenges, from new mask overlay strategies, to layout pattern split, novel OPC, increased CD tolerances, new etch techniques, as well as long processing time, all of which compromise its return on investment (RoI). In contrast, it can be claimed e.g., that the RoI is the highest for the NIL but this technology bears significant risk. For all novel patterning techniques, the key questions remain: when and how should they be introduced, what is their long-term potential, when should they be replaced, and by what successor technology. We summarize the unpublished results of several panel discussions on DPT at the recent SPIE/BACUS conferences.

  17. Laboratory development TPV generator

    SciTech Connect

    Holmquist, G.A.; Wong, E.M.; Waldman, C.H.

    1996-02-01

    A laboratory model of a TPV generator in the kilowatt range was developed and tested. It was based on methane/oxygen combustion and a spectrally matched selective emitter/collector pair (ytterbia emitter-silicon PV cell). The system demonstrated a power output of 2.4 kilowatts at an overall efficiency of 4.5{percent} without recuperation of heat from the exhaust gases. Key aspects of the effort include: (1) process development and fabrication of mechanically strong selective emitter ceramic textile materials; (2) design of a stirred reactor emitter/burner capable of handling up to 175,000 Btu/hr fuel flows; (3) support to the developer of the production silicon concentrator cells capable of withstanding TPV environments; (4) assessing the apparent temperature exponent of selective emitters; and (5) determining that the remaining generator efficiency improvements are readily defined combustion engineering problems that do not necessitate breakthrough technology. The fiber matrix selective emitter ceramic textile (felt) was fabricated by a relic process with the final heat-treatment controlling the grain growth in the porous ceramic fiber matrix. This textile formed a cylindrical cavity for a stirred reactor. The ideal stirred reactor is characterized by constant temperature combustion resulting in a uniform reactor temperature. This results in a uniform radiant emission from the emitter. As a result of significant developments in the porous emitter matrix technology, a TPV generator burner/emitter was developed that produced kilowatts of radiant energy. {copyright} {ital 1996 American Institute of Physics.}

  18. Two-stage Turing model for generating pigment patterns on the leopard and the jaguar

    NASA Astrophysics Data System (ADS)

    Liu, R. T.; Liaw, S. S.; Maini, P. K.

    2006-07-01

    Based on the results of phylogenetic analysis, which showed that flecks are the primitive pattern of the felid family and all other patterns including rosettes and blotches develop from it, we construct a Turing reaction-diffusion model which generates spot patterns initially. Starting from this spotted pattern, we successfully generate patterns of adult leopards and jaguars by tuning parameters of the model in the subsequent phase of patterning.

  19. Silicon central pattern generators for cardiac diseases.

    PubMed

    Nogaret, Alain; O'Callaghan, Erin L; Lataro, Renata M; Salgado, Helio C; Meliza, C Daniel; Duncan, Edward; Abarbanel, Henry D I; Paton, Julian F R

    2015-02-15

    Cardiac rhythm management devices provide therapies for both arrhythmias and resynchronisation but not heart failure, which affects millions of patients worldwide. This paper reviews recent advances in biophysics and mathematical engineering that provide a novel technological platform for addressing heart disease and enabling beat-to-beat adaptation of cardiac pacing in response to physiological feedback. The technology consists of silicon hardware central pattern generators (hCPGs) that may be trained to emulate accurately the dynamical response of biological central pattern generators (bCPGs). We discuss the limitations of present CPGs and appraise the advantages of analog over digital circuits for application in bioelectronic medicine. To test the system, we have focused on the cardio-respiratory oscillators in the medulla oblongata that modulate heart rate in phase with respiration to induce respiratory sinus arrhythmia (RSA). We describe here a novel, scalable hCPG comprising physiologically realistic (Hodgkin-Huxley type) neurones and synapses. Our hCPG comprises two neurones that antagonise each other to provide rhythmic motor drive to the vagus nerve to slow the heart. We show how recent advances in modelling allow the motor output to adapt to physiological feedback such as respiration. In rats, we report on the restoration of RSA using an hCPG that receives diaphragmatic electromyography input and use it to stimulate the vagus nerve at specific time points of the respiratory cycle to slow the heart rate. We have validated the adaptation of stimulation to alterations in respiratory rate. We demonstrate that the hCPG is tuneable in terms of the depth and timing of the RSA relative to respiratory phase. These pioneering studies will now permit an analysis of the physiological role of RSA as well as its any potential therapeutic use in cardiac disease. PMID:25433077

  20. A movement pattern generator model using artificial neural networks.

    PubMed

    Srinivasan, S; Gander, R E; Wood, H C

    1992-07-01

    Artificial neural networks (ANN's) allow a new approach to biological modeling. The main applications of ANN's have been geared towards the modeling of the association and learning mechanisms of the brain; only a few researchers have explored them for motor control. The fact that ANN's are based on biological systems indicates their potential application for a biological act such as locomotion. Towards this goal, we have developed a "movement pattern generator," using an ANN for generating periodic movement trajectories. This model is based on the concept of "central pattern generators." Jordan's sequential network, which is capable of learning sequences of patterns, was modified and used to generate several bipedal trajectories (or gaits), coded in task space, at different frequencies. The network model successfully learned all of the trajectories presented to it. The model has many attractive properties such as limit cycle behavior, generalization of trajectories and frequencies, phase maintenance, and fault tolerance. The movement pattern generator model is potentially applicable for improved understanding of animal locomotion and for use in legged robots and rehabilitation medicine. PMID:1516938

  1. Modeling Scalable Pattern Generation in DNA Reaction Networks

    PubMed Central

    Allen, Peter B.; Chen, Xi; Simpson, Zack B.; Ellington, Andrew D.

    2013-01-01

    We have developed a theoretical framework for developing patterns in multiple dimensions using controllable diffusion and designed reactions implemented in DNA. This includes so-called strand displacement reactions in which one single-stranded DNA hybridizes to a hemi-duplex DNA and displaces another single-stranded DNA, reversibly or irreversibly. These reactions can be designed to proceed with designed rate and molecular specificity. By also controlling diffusion by partial complementarity to a stationary, cross-linked DNA, we can generate predictable patterns. We demonstrate this with several simulations showing deterministic, predictable shapes in space. PMID:25506295

  2. Generating Coherent Patterns of Activity from Chaotic Neural Networks

    PubMed Central

    Sussillo, David; Abbott, L. F.

    2009-01-01

    Neural circuits display complex activity patterns both spontaneously and when responding to a stimulus or generating a motor output. How are these two forms of activity related? We develop a procedure called FORCE learning for modifying synaptic strengths either external to or within a model neural network to change chaotic spontaneous activity into a wide variety of desired activity patterns. FORCE learning works even though the networks we train are spontaneously chaotic and we leave feedback loops intact and unclamped during learning. Using this approach, we construct networks that produce a wide variety of complex output patterns, input-output transformations that require memory, multiple outputs that can be switched by control inputs, and motor patterns matching human motion capture data. Our results reproduce data on pre-movement activity in motor and premotor cortex, and suggest that synaptic plasticity may be a more rapid and powerful modulator of network activity than generally appreciated. PMID:19709635

  3. Generation 1.5 Written Error Patterns: A Comparative Study

    ERIC Educational Resources Information Center

    Doolan, Stephen M.; Miller, Donald

    2012-01-01

    In an attempt to contribute to existing research on Generation 1.5 students, the current study uses quantitative and qualitative methods to compare error patterns in a corpus of Generation 1.5, L1, and L2 community college student writing. This error analysis provides one important way to determine if error patterns in Generation 1.5 student…

  4. Generating Spatiotemporal Joint Torque Patterns from Dynamical Synchronization of Distributed Pattern Generators

    PubMed Central

    Pitti, Alexandre; Lungarella, Max; Kuniyoshi, Yasuo

    2009-01-01

    Pattern generators found in the spinal cord are no more seen as simple rhythmic oscillators for motion control. Indeed, they achieve flexible and dynamical coordination in interaction with the body and the environment dynamics giving to rise motor synergies. Discovering the mechanisms underlying the control of motor synergies constitutes an important research question not only for neuroscience but also for robotics: the motors coordination of high dimensional robotic systems is still a drawback and new control methods based on biological solutions may reduce their overall complexity. We propose to model the flexible combination of motor synergies in embodied systems via partial phase synchronization of distributed chaotic systems; for specific coupling strength, chaotic systems are able to phase synchronize their dynamics to the resonant frequencies of one external force. We take advantage of this property to explore and exploit the intrinsic dynamics of one specified embodied system. In two experiments with bipedal walkers, we show how motor synergies emerge when the controllers phase synchronize to the body's dynamics, entraining it to its intrinsic behavioral patterns. This stage is characterized by directed information flow from the sensors to the motors exhibiting the optimal situation when the body dynamics drive the controllers (mutual entrainment). Based on our results, we discuss the relevance of our findings for modeling the modular control of distributed pattern generators exhibited in the spinal cord, and for exploring the motor synergies in robots. PMID:20011216

  5. Use of design pattern layout for automatic metrology recipe generation

    NASA Astrophysics Data System (ADS)

    Tabery, Cyrus; Page, Lorena

    2005-05-01

    As critical dimension control requirements become more challenging, due to complex designs, aggressive lithography, and the constant need to shrink,metrology recipe generation and design evaluation have also become very complex. Hundreds of unique sites must be measured and monitored to ensure good device performance and high yield. The use of the design and layout for automated metrology recipe generation will be critical to that challenge. The DesignGauge from Hitachi implements a system enabling arbitrary recipe generation and control of SEM observations performed on the wafer, based only on the design information. This concept for recipe generation can reduce the time to develop a technology node from RET and design rule selection, through OPC model calibration and verification, and all the way to high volume manufacturing. Conventional recipe creation for a large number of measurement targets requires a significant amount of engineering time. Often these recipes are used only once or twice during mask and process verification or OPC calibration data acquisition. This process of manual setup and analysis is also potentially error prone. CD-SEM recipe creation typically requires an actual wafer, so the recipe creation cannot occur until the scanner and reticle are in house. All of these problems with conventional CD SEM lead to increased development time and reduced final process quality. The new model of CD-SEM recipe generation and management utilizes design-to-SEM matching technology. This new technology extracts an idealized shape from the designed pattern, and utilizes the shape information for pattern matching. As a result, the designed pattern is used as basis for the template instead of the actual SEM image. Recipe creation can be achieved in a matter of seconds once the target site list is finalized. The sequence of steps for creating a recipe are: generate a target site list, pass the design polygons (GDS) and site list to the CD SEM, define references

  6. The generation of vertebral segmental patterning in the chick embryo

    PubMed Central

    Senthinathan, Biruntha; Sousa, Cátia; Tannahill, David; Keynes, Roger

    2012-01-01

    We have carried out a series of experimental manipulations in the chick embryo to assess whether the notochord, neural tube and spinal nerves influence segmental patterning of the vertebral column. Using Pax1 expression in the somite-derived sclerotomes as a marker for segmentation of the developing intervertebral disc, our results exclude such an influence. In contrast to certain teleost species, where the notochord has been shown to generate segmentation of the vertebral bodies (chordacentra), these experiments indicate that segmental patterning of the avian vertebral column arises autonomously in the somite mesoderm. We suggest that in amniotes, the subdivision of each sclerotome into non-miscible anterior and posterior halves plays a critical role in establishing vertebral segmentation, and in maintaining left/right alignment of the developing vertebral elements at the body midline. PMID:22458512

  7. Pattern Generation by Dissipative Parametric Instability

    NASA Astrophysics Data System (ADS)

    Perego, A. M.; Tarasov, N.; Churkin, D. V.; Turitsyn, S. K.; Staliunas, K.

    2016-01-01

    Nonlinear instabilities are responsible for spontaneous pattern formation in a vast number of natural and engineered systems, ranging from biology to galaxy buildup. We propose a new instability mechanism leading to pattern formation in spatially extended nonlinear systems, which is based on a periodic antiphase modulation of spectrally dependent losses arranged in a zigzag way: an effective filtering is imposed at symmetrically located wave numbers k and -k in alternating order. The properties of the dissipative parametric instability differ from the features of both key classical concepts of modulation instabilities, i.e., the Benjamin-Feir instability and the Faraday instabiltyity. We demonstrate how the dissipative parametric instability can lead to the formation of stable patterns in one- and two-dimensional systems. The proposed instability mechanism is generic and can naturally occur or can be implemented in various physical systems.

  8. Pattern Generation by Dissipative Parametric Instability.

    PubMed

    Perego, A M; Tarasov, N; Churkin, D V; Turitsyn, S K; Staliunas, K

    2016-01-15

    Nonlinear instabilities are responsible for spontaneous pattern formation in a vast number of natural and engineered systems, ranging from biology to galaxy buildup. We propose a new instability mechanism leading to pattern formation in spatially extended nonlinear systems, which is based on a periodic antiphase modulation of spectrally dependent losses arranged in a zigzag way: an effective filtering is imposed at symmetrically located wave numbers k and -k in alternating order. The properties of the dissipative parametric instability differ from the features of both key classical concepts of modulation instabilities, i.e., the Benjamin-Feir instability and the Faraday instabiltyity. We demonstrate how the dissipative parametric instability can lead to the formation of stable patterns in one- and two-dimensional systems. The proposed instability mechanism is generic and can naturally occur or can be implemented in various physical systems. PMID:26824573

  9. Complex expression patterns of lymphocyte-specific genes during the development of cartilaginous fish implicate unique lymphoid tissues in generating an immune repertoire

    NASA Technical Reports Server (NTRS)

    Miracle, A. L.; Anderson, M. K.; Litman, R. T.; Walsh, C. J.; Luer, C. A.; Rothenberg, E. V.; Litman, G. W.

    2001-01-01

    Cartilaginous fish express canonical B and T cell recognition genes, but their lymphoid organs and lymphocyte development have been poorly defined. Here, the expression of Ig, TCR, recombination-activating gene (Rag)-1 and terminal deoxynucleosidase (TdT) genes has been used to identify roles of various lymphoid tissues throughout development in the cartilaginous fish, Raja eglanteria (clearnose skate). In embryogenesis, Ig and TCR genes are sharply up-regulated at 8 weeks of development. At this stage TCR and TdT expression is limited to the thymus; later, TCR gene expression appears in peripheral sites in hatchlings and adults, suggesting that the thymus is a source of T cells as in mammals. B cell gene expression indicates more complex roles for the spleen and two special organs of cartilaginous fish-the Leydig and epigonal (gonad-associated) organs. In the adult, the Leydig organ is the site of the highest IgM and IgX expression. However, the spleen is the first site of IgM expression, while IgX is expressed first in gonad, liver, Leydig and even thymus. Distinctive spatiotemporal patterns of Ig light chain gene expression also are seen. A subset of Ig genes is pre-rearranged in the germline of the cartilaginous fish, making expression possible without rearrangement. To assess whether this allows differential developmental regulation, IgM and IgX heavy chain cDNA sequences from specific tissues and developmental stages have been compared with known germline-joined genomic sequences. Both non-productively rearranged genes and germline-joined genes are transcribed in the embryo and hatchling, but not in the adult.

  10. A central pattern generator producing alternative outputs: temporal pattern of premotor activity.

    PubMed

    Norris, Brian J; Weaver, Adam L; Morris, Lee G; Wenning, Angela; García, Paul A; Calabrese, Ronald L

    2006-07-01

    The central pattern generator for heartbeat in medicinal leeches constitutes seven identified pairs of segmental heart interneurons. Four identified pairs of heart interneurons make a staggered pattern of inhibitory synaptic connections with segmental heart motor neurons. Using extracellular recording from multiple interneurons in the network in 56 isolated nerve cords, we show that this pattern generator produces a side-to-side asymmetric pattern of intersegmental coordination among ipsilateral premotor interneurons. This pattern corresponds to a similarly asymmetric fictive motor pattern in heart motor neurons and asymmetric constriction pattern of the two tubular hearts, synchronous and peristaltic. We provide a quantitative description of the firing pattern of all the premotor interneurons, including phase, duty cycle, and intraburst frequency of this premotor activity pattern. This analysis identifies two stereotypical coordination modes corresponding to synchronous and peristaltic, which show phase constancy over a broad range of periods as do the fictive motor pattern and the heart constriction pattern. Coordination mode is controlled through one segmental pair of heart interneurons (switch interneurons). Side-to-side switches in coordination mode are a regular feature of this pattern generator and occur with changes in activity state of these switch interneurons. Associated with synchronous coordination of premotor interneurons, the ipsilateral switch interneuron is in an active state, during which it produces rhythmic bursts, whereas associated with peristaltic coordination, the ipsilateral switch interneuron is largely silent. We argue that timing and pattern elaboration are separate functions produced by overlapping subnetworks in the heartbeat central pattern generator. PMID:16611849

  11. Generation of Viable Cell and Biomaterial Patterns by Laser Transfer

    NASA Astrophysics Data System (ADS)

    Ringeisen, Bradley

    2001-03-01

    In order to fabricate and interface biological systems for next generation applications such as biosensors, protein recognition microarrays, and engineered tissues, it is imperative to have a method of accurately and rapidly depositing different active biomaterials in patterns or layered structures. Ideally, the biomaterial structures would also be compatible with many different substrates including technologically relevant platforms such as electronic circuits or various detection devices. We have developed a novel laser-based technique, termed matrix assisted pulsed laser evaporation direct write (MAPLE DW), that is able to direct write patterns and three-dimensional structures of numerous biologically active species ranging from proteins and antibodies to living cells. Specifically, we have shown that MAPLE DW is capable of forming mesoscopic patterns of living prokaryotic cells (E. coli bacteria), living mammalian cells (Chinese hamster ovaries), active proteins (biotinylated bovine serum albumin, horse radish peroxidase), and antibodies specific to a variety of classes of cancer related proteins including intracellular and extracellular matrix proteins, signaling proteins, cell cycle proteins, growth factors, and growth factor receptors. In addition, patterns of viable cells and active biomolecules were deposited on different substrates including metals, semiconductors, nutrient agar, and functionalized glass slides. We will present an explanation of the laser-based transfer mechanism as well as results from our recent efforts to fabricate protein recognition microarrays and tissue-based microfluidic networks.

  12. Automated branching pattern report generation for laparoscopic surgery assistance

    NASA Astrophysics Data System (ADS)

    Oda, Masahiro; Matsuzaki, Tetsuro; Hayashi, Yuichiro; Kitasaka, Takayuki; Misawa, Kazunari; Mori, Kensaku

    2015-05-01

    This paper presents a method for generating branching pattern reports of abdominal blood vessels for laparoscopic gastrectomy. In gastrectomy, it is very important to understand branching structure of abdominal arteries and veins, which feed and drain specific abdominal organs including the stomach, the liver and the pancreas. In the real clinical stage, a surgeon creates a diagnostic report of the patient anatomy. This report summarizes the branching patterns of the blood vessels related to the stomach. The surgeon decides actual operative procedure. This paper shows an automated method to generate a branching pattern report for abdominal blood vessels based on automated anatomical labeling. The report contains 3D rendering showing important blood vessels and descriptions of branching patterns of each vessel. We have applied this method for fifty cases of 3D abdominal CT scans and confirmed the proposed method can automatically generate branching pattern reports of abdominal arteries.

  13. An optical pattern classification using computer-generated holograms

    NASA Astrophysics Data System (ADS)

    Kajiki, Yoshinori; Matsushita, Kenji; Shimizu, Eiji

    1990-07-01

    An optical pattern classification system is proposed which performs weighting and summation by the optical system using computer-generated holograms (CGHs). The system makes it possible to simplify the structure and to improve the processing speed. A trainable pattern classification system which performs weight modification by using a CGH matrix and a dot matrix liquid crystal display (LCD) as a shutter array is proposed. The trainable pattern classifier using a CGH matrix and LCD is described, and the experimental results are presented.

  14. Characteristic flow patterns generated by macrozoobenthic structures

    NASA Astrophysics Data System (ADS)

    Friedrichs, M.; Graf, G.

    2009-02-01

    A laboratory flume channel, equipped with an acoustic Doppler flow sensor and a bottom scanning laser, was used for detailed, non-intrusive flow measurements (at 2 cm s - 1 and 10 cm s - 1 ) around solitary biogenic structures, combined with high-resolution mapping of the structure shape and position. The structures were replicates of typical macrozoobenthic species commonly found in the Mecklenburg Bight and with a presumed influence on both, the near-bed current regime and sediment transport dynamics: a worm tube, a snail shell, a mussel, a sand mound, a pit, and a cross-stream track furrow. The flow was considerably altered locally by the different protruding structures (worm tube, snail, mussel and mound). They reduced the horizontal approach velocity by 72% to 79% in the wake zone at about 1-2 cm height, and the flow was deflected around the structures with vertical and lateral velocities of up to 10% and 20% of the free-stream velocity respectively in a region adjacent to the structures. The resulting flow separation (at flow Reynolds number of about 4000 and 20,000 respectively) divided an outer deflection region from an inner region with characteristic vortices and the wake region. All protruding structures showed this general pattern, but also produced individual characteristics. Conversely, the depressions (track and pit) only had a weak influence on the local boundary layer flow, combined with a considerable flow reduction within their cavities (between 29% and 53% of the free-stream velocity). A longitudinal vortex formed, below which a stagnant space was found. The average height affected by the structure-related mass flow rate deficit for the two velocities was 1.6 cm and 1.3 cm respectively (80% of height and 64%) for the protruding structures and 0.6 cm and 0.9 cm (90% and 127% of depth) for the depressions. Marine benthic soft-bottom macrozoobenthos species are expected to benefit from the flow modifications they induce, particularly in terms of

  15. Central Pattern Generator for Locomotion: Anatomical, Physiological, and Pathophysiological Considerations

    PubMed Central

    Guertin, Pierre A.

    2013-01-01

    This article provides a perspective on major innovations over the past century in research on the spinal cord and, specifically, on specialized spinal circuits involved in the control of rhythmic locomotor pattern generation and modulation. Pioneers such as Charles Sherrington and Thomas Graham Brown have conducted experiments in the early twentieth century that changed our views of the neural control of locomotion. Their seminal work supported subsequently by several decades of evidence has led to the conclusion that walking, flying, and swimming are largely controlled by a network of spinal neurons generally referred to as the central pattern generator (CPG) for locomotion. It has been subsequently demonstrated across all vertebrate species examined, from lampreys to humans, that this CPG is capable, under some conditions, to self-produce, even in absence of descending or peripheral inputs, basic rhythmic, and coordinated locomotor movements. Recent evidence suggests, in turn, that plasticity changes of some CPG elements may contribute to the development of specific pathophysiological conditions associated with impaired locomotion or spontaneous locomotor-like movements. This article constitutes a comprehensive review summarizing key findings on the CPG as well as on its potential role in Restless Leg Syndrome, Periodic Leg Movement, and Alternating Leg Muscle Activation. Special attention will be paid to the role of the CPG in a recently identified, and uniquely different neurological disorder, called the Uner Tan Syndrome. PMID:23403923

  16. From Central Pattern Generator to Sensory Template in the Evolution of Birdsong

    ERIC Educational Resources Information Center

    Konishi, Masakazu

    2010-01-01

    Central nervous networks, be they a part of the human brain or a group of neurons in a snail, may be designed to produce distinct patterns of movement. Central pattern generators can account for the development and production of normal vocal signals without auditory feedback in non-songbirds. Songbirds need auditory feedback to develop and…

  17. Teaching Design Patterns through Computer Game Development

    ERIC Educational Resources Information Center

    Gestwicki, Paul; Sun, Fu-Shing

    2008-01-01

    We present an approach for teaching design patterns that emphasizes object-orientation and patterns integration. The context of computer game development is used to engage and motivate students, and it is additionally rich with design patterns. A case study is presented based on "EEClone," an arcade-style computer game implemented in Java. Our…

  18. Sexually differentiated central pattern generators in Xenopus laevis.

    PubMed

    Zornik, Erik; Yamaguchi, Ayako

    2008-06-01

    Understanding the neural mechanisms that underlie the function of central pattern generators (CPGs) presents a formidable challenge requiring sophisticated tools and well-chosen model systems. In this article, we describe recent work on vocalizations of the African clawed frog Xenopus laevis. These behaviors are driven by sexually differentiated CPGs and are exceptionally well suited to this objective. In particular, a simplified mechanism of vocal production (independent of respiratory musculature) allows straightforward interpretations of nerve activity with respect to behavior. Furthermore, the development of a fictively vocalizing isolated brain, together with the finding of rapid androgen-induced masculinization of female vocalizations, provides an invaluable tool for determining how new behaviors arise from existing circuits. PMID:18471902

  19. Fringe patterns generated by micro-optical sensors for pattern recognition.

    PubMed

    Tamee, Kreangsak; Chaiwong, Khomyuth; Yothapakdee, Kriengsak; Yupapin, Preecha P

    2015-01-01

    We present a new result of pattern recognition generation scheme using a small-scale optical muscle sensing system, which consisted of an optical add-drop filter incorporating two nonlinear optical side ring resonators. When light from laser source enters into the system, the device is stimulated by an external physical parameter that introduces a change in the phase of light propagation within the sensing device, which can be formed by the interference fringe patterns. Results obtained have shown that the fringe patterns can be used to form the relationship between signal patterns and fringe pattern recognitions. PMID:24450752

  20. Digitally based pattern generator for an electron-beam welder

    SciTech Connect

    Whitten, L.G. III

    1981-02-19

    A digitally based deflection generator for an electron-beam welder is presented. Up to seven patterns of any shape are stored in programmable read-only memory (PROM). The pattern resolution is 39% at frequencies from 10 Hz to 1 kHz and can be x-t, y-t, or x-y formed. Frequency and pattern selections may be chosen by the welder computer or manually selected on the front panel. The ability to repeatedly synchronize two waveforms of any shape and frequency enables an unlimited variety of welds.

  1. Ring Counter Based ATPG for Low Transition Test Pattern Generation

    PubMed Central

    Begam, V. M. Thoulath; Baulkani, S.

    2015-01-01

    In test mode test patterns are applied in random fashion to the circuit under circuit. This increases switching transition between the consecutive test patterns and thereby increases dynamic power dissipation. The proposed ring counter based ATPG reduces vertical switching transitions by inserting test vectors only between the less correlative test patterns. This paper presents the RC-ATPG with an external circuit. The external circuit consists of XOR gates, full adders, and multiplexers. First the total number of transitions between the consecutive test patterns is determined. If it is more, then the external circuit generates and inserts test vectors in between the two test patterns. Test vector insertion increases the correlation between the test patterns and reduces dynamic power dissipation. The results prove that the test patterns generated by the proposed ATPG have fewer transitions than the conventional ATPG. Experimental results based on ISCAS'85 and ISCAS'89 benchmark circuits show 38.5% reduction in the average power and 50% reduction in the peak power attained during testing with a small size decoding logic. PMID:26075295

  2. Central respiratory pattern generation in the bullfrog, Rana catesbeiana.

    PubMed

    Milsom, W K; Reid, S G; Meier, J T; Kinkead, R

    1999-11-01

    There are two components to breathing pattern generation the production of the pattern of neural discharge associated with individual breaths, and the pattern in which breaths are produced to effect ventilation. Bullfrogs typically breathe with randomly distributed breaths. When respiratory drive is elevated, breathing becomes more regular and often episodic. Studies on in vitro brainstem-spinal cord preparations of the adult bullfrog and in situ preparations of decerebrate, paralyzed, unidirectionally ventilated animals suggest that output from the central rhythm generator in frogs is conditional on receiving some input and that a host of central inputs remain even in the most reduced preparations. There appear to be descending inputs from sites in the dorsal brainstem just caudal to the optic chiasma that cluster breaths into episodes, a strong excitatory input caudal to this site but rostral to the origin of the Vth cranial nerve and, possibly, segmental rhythm generators throughout the medulla that are normally entrained to produce the normal breathing pattern. The data also suggest that the shape of the discharge pattern (augmenting, decrementing) and timing of outputs (alternating vs synchronous) associated with motor outflow during each breath are also dependent on the interconnections between these various sites. PMID:10665378

  3. Central pattern generator for vocalization: Is there a vertebrate morphotype?

    PubMed Central

    Bass, Andrew H.

    2014-01-01

    Animals that generate acoustic signals for social communication are faced with two essential tasks: generate a temporally precise signal and inform the auditory system about the occurrence of one’s own sonic signal. Recent studies of sound producing fishes delineate a hindbrain network comprised of anatomically distinct compartments coding equally distinct neurophysiological properties that allow an organism to meet these behavioral demands. A set of neural characters comprising a vocal-sonic central pattern generator (CPG) morphotype is proposed for fishes and tetrapods that shares evolutionary developmental origins with pectoral appendage motor systems. PMID:25050813

  4. The Network Spinal Wave as a Central Pattern Generator

    PubMed Central

    Epstein, Donald M.; Lemberger, Daniel

    2016-01-01

    Abstract Objectives: This article explains the research on a unique spinal wave visibly observed in association with network spinal analysis care. Since 1997, the network wave has been studied using surface electromyography (sEMG), characterized mathematically, and determined to be a unique and repeatable phenomenon. Methods: The authors provide a narrative review of the research and a context for the network wave's development. Results: The sEMG research demonstrates that the movement of the musculature of the spine during the wave phenomenon is electromagnetic and mechanical. The changes running along the spine were characterized mathematically at three distinct levels of care. Additionally, the wave has the mathematical properties of a central pattern generator (CPG). Conclusions: The network wave may be the first CPG discovered in the spine unrelated to locomotion. The mathematical characterization of the signal also demonstrates coherence at a distance between the sacral to cervical spine. According to mathematical engineers, based on studies conducted a decade apart, the wave itself is a robust phenomenon and the detection methods for this coherence may represent a new measure for central nervous system health. This phenomenon has implications for recovery from spinal cord injury and for reorganizational healing development. PMID:27243963

  5. Global Software Development Patterns for Project Management

    NASA Astrophysics Data System (ADS)

    Välimäki, Antti; Kääriäinen, Jukka; Koskimies, Kai

    Global software development with the agile or waterfall development process has been taken into use in many companies. GSD offers benefits but also new challenges without known, documented solutions. The goal of this research is to present current best practices for GSD in the form of process patterns for project management, evaluated by using a scenario-based assessment method. The best practices have been collected from a large company operating in process automation. It is expected that the resulting pattern language helps other companies to improve their GSD processes by incorporating the patterns in the processes.

  6. Order parameter for bursting polyrhythms in multifunctional central pattern generators

    NASA Astrophysics Data System (ADS)

    Wojcik, Jeremy; Clewley, Robert; Shilnikov, Andrey

    2011-05-01

    We examine multistability of several coexisting bursting patterns in a central pattern generator network composed of three Hodgkin-Huxley type cells coupled reciprocally by inhibitory synapses. We establish that the control of switching between bursting polyrhythms and their bifurcations are determined by the temporal characteristics, such as the duty cycle, of networked interneurons and the coupling strength asymmetry. A computationally effective approach to the reduction of dynamics of the nine-dimensional network to two-dimensional Poincaré return mappings for phase lags between the interneurons is presented.

  7. Electronic Tongue Generating Continuous Recognition Patterns for Protein Analysis

    PubMed Central

    Hou, Yanxia; Genua, Maria; Garçon, Laurie-Amandine; Buhot, Arnaud; Calemczuk, Roberto; Bonnaffé, David; Lortat-Jacob, Hugues; Livache, Thierry

    2014-01-01

    In current protocol, a combinatorial approach has been developed to simplify the design and production of sensing materials for the construction of electronic tongues (eT) for protein analysis. By mixing a small number of simple and easily accessible molecules with different physicochemical properties, used as building blocks (BBs), in varying and controlled proportions and allowing the mixtures to self-assemble on the gold surface of a prism, an array of combinatorial surfaces featuring appropriate properties for protein sensing was created. In this way, a great number of cross-reactive receptors can be rapidly and efficiently obtained. By combining such an array of combinatorial cross-reactive receptors (CoCRRs) with an optical detection system such as surface plasmon resonance imaging (SPRi), the obtained eT can monitor the binding events in real-time and generate continuous recognition patterns including 2D continuous evolution profile (CEP) and 3D continuous evolution landscape (CEL) for samples in liquid. Such an eT system is efficient for discrimination of common purified proteins. PMID:25286325

  8. Electronic tongue generating continuous recognition patterns for protein analysis.

    PubMed

    Hou, Yanxia; Genua, Maria; Garçon, Laurie-Amandine; Buhot, Arnaud; Calemczuk, Roberto; Bonnaffé, David; Lortat-Jacob, Hugues; Livache, Thierry

    2014-01-01

    In current protocol, a combinatorial approach has been developed to simplify the design and production of sensing materials for the construction of electronic tongues (eT) for protein analysis. By mixing a small number of simple and easily accessible molecules with different physicochemical properties, used as building blocks (BBs), in varying and controlled proportions and allowing the mixtures to self-assemble on the gold surface of a prism, an array of combinatorial surfaces featuring appropriate properties for protein sensing was created. In this way, a great number of cross-reactive receptors can be rapidly and efficiently obtained. By combining such an array of combinatorial cross-reactive receptors (CoCRRs) with an optical detection system such as surface plasmon resonance imaging (SPRi), the obtained eT can monitor the binding events in real-time and generate continuous recognition patterns including 2D continuous evolution profile (CEP) and 3D continuous evolution landscape (CEL) for samples in liquid. Such an eT system is efficient for discrimination of common purified proteins. PMID:25286325

  9. Interactions between zebrafish pigment cells responsible for the generation of Turing patterns.

    PubMed

    Nakamasu, Akiko; Takahashi, Go; Kanbe, Akio; Kondo, Shigeru

    2009-05-26

    The reaction-diffusion system is one of the most studied nonlinear mechanisms that generate spatially periodic structures autonomous. On the basis of many mathematical studies using computer simulations, it is assumed that animal skin patterns are the most typical examples of the Turing pattern (stationary periodic pattern produced by the reaction-diffusion system). However, the mechanism underlying pattern formation remains unknown because the molecular or cellular basis of the phenomenon has yet to be identified. In this study, we identified the interaction network between the pigment cells of zebrafish, and showed that this interaction network possesses the properties necessary to form the Turing pattern. When the pigment cells in a restricted region were killed with laser treatment, new pigment cells developed to regenerate the striped pattern. We also found that the development and survival of the cells were influenced by the positioning of the surrounding cells. When melanophores and xanthophores were located at adjacent positions, these cells excluded one another. However, melanophores required a mass of xanthophores distributed in a more distant region for both differentiation and survival. Interestingly, the local effect of these cells is opposite to that of their effects long range. This relationship satisfies the necessary conditions required for stable pattern formation in the reaction-diffusion model. Simulation calculations for the deduced network generated wild-type pigment patterns as well as other mutant patterns. Our findings here allow further investigation of Turing pattern formation within the context of cell biology. PMID:19433782

  10. Neural Sequence Generation Using Spatiotemporal Patterns of Inhibition.

    PubMed

    Cannon, Jonathan; Kopell, Nancy; Gardner, Timothy; Markowitz, Jeffrey

    2015-11-01

    Stereotyped sequences of neural activity are thought to underlie reproducible behaviors and cognitive processes ranging from memory recall to arm movement. One of the most prominent theoretical models of neural sequence generation is the synfire chain, in which pulses of synchronized spiking activity propagate robustly along a chain of cells connected by highly redundant feedforward excitation. But recent experimental observations in the avian song production pathway during song generation have shown excitatory activity interacting strongly with the firing patterns of inhibitory neurons, suggesting a process of sequence generation more complex than feedforward excitation. Here we propose a model of sequence generation inspired by these observations in which a pulse travels along a spatially recurrent excitatory chain, passing repeatedly through zones of local feedback inhibition. In this model, synchrony and robust timing are maintained not through redundant excitatory connections, but rather through the interaction between the pulse and the spatiotemporal pattern of inhibition that it creates as it circulates the network. These results suggest that spatially and temporally structured inhibition may play a key role in sequence generation. PMID:26536029

  11. Neural Sequence Generation Using Spatiotemporal Patterns of Inhibition

    PubMed Central

    Cannon, Jonathan; Kopell, Nancy; Gardner, Timothy; Markowitz, Jeffrey

    2015-01-01

    Stereotyped sequences of neural activity are thought to underlie reproducible behaviors and cognitive processes ranging from memory recall to arm movement. One of the most prominent theoretical models of neural sequence generation is the synfire chain, in which pulses of synchronized spiking activity propagate robustly along a chain of cells connected by highly redundant feedforward excitation. But recent experimental observations in the avian song production pathway during song generation have shown excitatory activity interacting strongly with the firing patterns of inhibitory neurons, suggesting a process of sequence generation more complex than feedforward excitation. Here we propose a model of sequence generation inspired by these observations in which a pulse travels along a spatially recurrent excitatory chain, passing repeatedly through zones of local feedback inhibition. In this model, synchrony and robust timing are maintained not through redundant excitatory connections, but rather through the interaction between the pulse and the spatiotemporal pattern of inhibition that it creates as it circulates the network. These results suggest that spatially and temporally structured inhibition may play a key role in sequence generation. PMID:26536029

  12. Generating patterns from fields of cells. Examples from Drosophila segmentation.

    PubMed

    Sanson, B

    2001-12-01

    In Drosophila, a cascade of maternal, gap, pair-rule and segment polarity genes subdivides the antero/posterior axis of the embryo into repeating segmental stripes. This review summarizes what happens next, i.e. how an intrasegmental pattern is generated and controls the differentiation of specific cell types in the epidermis. Within each segment, cells secreting the signalling molecules Wingless (the homologue of vertebrate Wnt-1) and Hedgehog are found in narrow stripes on both sides of the parasegmental boundary. The Wingless and Hedgehog organizing activities help to establish two more stripes per segment that localize ligands for the Epidermal Growth Factor and the Notch signalling pathways, respectively. These four signals then act at short range and in concert to control epidermal differentiation at the single cell level across the segment. This example from Drosophila provides a paradigm for how organizers generate precise patterns, and ultimately different cell types, in a naïve field of cells. PMID:11743020

  13. Override of spontaneous respiratory pattern generator reduces cardiovascular parasympathetic influence

    NASA Technical Reports Server (NTRS)

    Patwardhan, A. R.; Vallurupalli, S.; Evans, J. M.; Bruce, E. N.; Knapp, C. F.

    1995-01-01

    We investigated the effects of voluntary control of breathing on autonomic function in cardiovascular regulation. Variability in heart rate was compared between 5 min of spontaneous and controlled breathing. During controlled breathing, for 5 min, subjects voluntarily reproduced their own spontaneous breathing pattern (both rate and volume on a breath-by-breath basis). With the use of this experimental design, we could unmask the effects of voluntary override of the spontaneous respiratory pattern generator on autonomic function in cardiovascular regulation without the confounding effects of altered respiratory pattern. Results from 10 subjects showed that during voluntary control of breathing, mean values of heart rate and blood pressure increased, whereas fractal and spectral powers in heart rate in the respiratory frequency region decreased. End-tidal PCO2 was similar during spontaneous and controlled breathing. These results indicate that the act of voluntary control of breathing decreases the influence of the vagal component, which is the principal parasympathetic influence in cardiovascular regulation.

  14. Continuities and changes in infant attachment patterns across two generations.

    PubMed

    Raby, K Lee; Steele, Ryan D; Carlson, Elizabeth A; Sroufe, L Alan

    2015-01-01

    This study examined the intergenerational continuities and changes in infant attachment patterns within a higher-risk longitudinal sample of 55 female participants born into poverty. Infant attachment was assessed using the Strange Situation when participants were 12 and 18 months as well as several decades later with participants' children. Paralleling earlier findings from this sample on the stability of attachment patterns from infancy to young adulthood, results provided evidence for intergenerational continuities in attachment disorganization but not security. Children of adults with histories of infant attachment disorganization were at an increased risk of forming disorganized attachments. Although changes in infant attachment patterns across the two generations were not correlated with individuals' caregiving experiences or interpersonal stresses and supports during childhood and adolescence, higher quality social support during adulthood was associated with intergenerational changes from insecure to secure infant-caregiver attachment relationships. PMID:26213155

  15. Continuities and Changes in Infant Attachment Patterns Across Two Generations

    PubMed Central

    Raby, K. Lee; Steele, Ryan D.; Carlson, Elizabeth A.; Sroufe, L. Alan

    2015-01-01

    This study examined the intergenerational continuities and changes in infant attachment patterns within a higher-risk longitudinal sample of 55 female participants born into poverty. Infant attachment was assessed using the Strange Situation when participants were 12 and 18 months as well as several decades later with participants’ children. Paralleling earlier findings from this sample on the stability of attachment patterns from infancy to young adulthood, results provided evidence for intergenerational continuities in attachment disorganization but not security. Children of adults with histories of infant attachment disorganization were at an increased risk of forming disorganized attachments. Although changes in infant attachment patterns across the two generations were not correlated with individuals’ caregiving experiences or interpersonal stresses and supports during childhood and adolescence, higher quality social support during adulthood was associated with intergenerational changes from insecure to secure infant-caregiver attachment relationships. PMID:26213155

  16. Automatic generation of primary sequence patterns from sets of related protein sequences.

    PubMed

    Smith, R F; Smith, T F

    1990-01-01

    We have developed a computer algorithm that can extract the pattern of conserved primary sequence elements common to all members of a homologous protein family. The method involves clustering the pairwise similarity scores among a set of related sequences to generate a binary dendrogram (tree). The tree is then reduced in a stepwise manner by progressively replacing the node connecting the two most similar termini by one common pattern until only a single common "root" pattern remains. A pattern is generated at a node by (i) performing a local optimal alignment on the sequence/pattern pair connected by the node with the use of an extended dynamic programming algorithm and then (ii) constructing a single common pattern from this alignment with a nested hierarchy of amino acid classes to identify the minimal inclusive amino acid class covering each paired set of elements in the alignment. Gaps within an alignment are created and/or extended using a "pay once" gap penalty rule, and gapped positions are converted into gap characters that function as 0 or 1 amino acid of any type during subsequent alignment. This method has been used to generate a library of covering patterns for homologous families in the National Biomedical Research Foundation/Protein Identification Resource protein sequence data base. We show that a covering pattern can be more diagnostic for sequence family membership than any of the individual sequences used to construct the pattern. PMID:2296575

  17. Electron beam pattern generator sensitivity to target potentials

    NASA Astrophysics Data System (ADS)

    Ruan, Junru; Hartley, John

    2005-11-01

    Electrostatic chucking is the plan of record for mask clamping in Extreme Ultraviolet (EUV) lithography. In order to minimize mask distortion it is recommended by the EUV lithography community that identical electrostatic chucks be used in the mask patterning and metrology tools. The high voltages used in electrostatic chucking have the potential to establish voltages on the mask surface, which may influence the electron optical characteristics of the pattern generator to the detrimental imaging of the pattern. To understand the relationship between image degradation and mask surface voltages, we are modeling the interaction between mask potential and electron beam columns. The first system modeled consists entirely of electrostatic elements, and the second one is a more traditional electron beam lithography system with electrostatic and magnetic components. All of the working parameters of the systems were fixed to establish optimal imaging on the grounded mask. We then altered the potential on the mask surface and determined the impact on focus and deflection errors. The simulation results establish the relationship between the mask potential, focus and deflection errors. Detailed data of focus deflection error versus mask potential will be presented for these electron beam column configurations. When combined with ITRS roadmap specifications, these results set boundaries on mask and chuck configurations as well as grounding schemes. The results are also applicable to charged particle maskless lithography schemes as well as issues of substrate charging in both pattern generators and metrology tools.

  18. Time-based patterning in development

    PubMed Central

    Moreno-Risueno, Miguel A

    2011-01-01

    Oscillating gene expression is a mechanism of patterning during development in both plants and animals. In vertebrates, oscillating gene expression establishes the musculoskeletal precursors (somites), while in plant roots it establishes the position of future organs (lateral roots). Both mechanisms constitute a specialized type of biological clock that converts temporal information into precise spatial patterns. Similarities, differences, and their functionality in organisms that evolved independently are discussed. PMID:21826283

  19. Automatic test pattern generation for logic circuits using the Boolean tree

    SciTech Connect

    Jeong Taegwon.

    1991-01-01

    The goal of this study was to develop an algorithm that can generate test patterns for combinational circuits and sequential logic circuits automatically. The new proposed algorithm generates a test pattern by using a special tree called a modified Boolean tree. In this algorithm, the construction of a modified Boolean tree is the most time-consuming step. Following the construction of a modified Boolean tree, a test pattern can be found by simply assigning a logic value 1 for even primary inputs and a logic value 0 for odd primary inputs of the constructed modified Boolean tree. The algorithm is applied to several benchmark circuits. The results showed the following: (1) for combinational circuits, the algorithm can generate test patterns 10-15% faster than the FAN algorithm, which is known as one of the most efficient algorithms to-date; (2) for sequential circuits, the algorithm shows more fault coverage than the nine valued algorithm.

  20. Patterns of Early Lexical and Phonological Development.

    ERIC Educational Resources Information Center

    Stoel-Gammon, Carol; Cooper, Judith A.

    1984-01-01

    Analyzes early lexical and phonological development in three children from late babbling through the acquisition of 50 conventional words. Focuses on (1) the relationship between prelinguistic and linguistic vocalizations, (2) phonological development after the onset of speech, (3) patterns of lexical selection, (4) rate of lexical acquisition,…

  1. Stochastic Generation of Wind Patterns over Lake Geneva

    NASA Astrophysics Data System (ADS)

    Barry, D. A.; Barry, C. E.; Razmi, A. M.; Lemmin, U.; Le Dantec, N.

    2011-12-01

    stochastic generator of wind-pattern indices, i.e., the INAR(1) model produces a sequence of integers, each of which corresponds to a wind pattern. For a given index, the aforementioned binned COSMO wind fields were sampled randomly to produce the stochastic wind-field sequence.

  2. Pattern Recognition on Read Positioning in Next Generation Sequencing

    PubMed Central

    Byeon, Boseon; Kovalchuk, Igor

    2016-01-01

    The usefulness and the utility of the next generation sequencing (NGS) technology are based on the assumption that the DNA or cDNA cleavage required to generate short sequence reads is random. Several previous reports suggest the existence of sequencing bias of NGS reads. To address this question in greater detail, we analyze NGS data from four organisms with different GC content, Plasmodium falciparum (19.39%), Arabidopsis thaliana (36.03%), Homo sapiens (40.91%) and Streptomyces coelicolor (72.00%). Using machine learning techniques, we recognize the pattern that the NGS read start is positioned in the local region where the nucleotide distribution is dissimilar from the global nucleotide distribution. We also demonstrate that the mono-nucleotide distribution underestimates sequencing bias, and the recognized pattern is explained largely by the distribution of multi-nucleotides (di-, tri-, and tetra- nucleotides) rather than mono-nucleotides. This implies that the correction of sequencing bias needs to be performed on the basis of the multi-nucleotide distribution. Providing companion software to quantify the effect of the recognized pattern on read positioning, we exemplify that the bias correction based on the mono-nucleotide distribution may not be sufficient to clean sequencing bias. PMID:27299343

  3. Evolution of central pattern generators and rhythmic behaviours.

    PubMed

    Katz, Paul S

    2016-01-01

    Comparisons of rhythmic movements and the central pattern generators (CPGs) that control them uncover principles about the evolution of behaviour and neural circuits. Over the course of evolutionary history, gradual evolution of behaviours and their neural circuitry within any lineage of animals has been a predominant occurrence. Small changes in gene regulation can lead to divergence of circuit organization and corresponding changes in behaviour. However, some behavioural divergence has resulted from large-scale rewiring of the neural network. Divergence of CPG circuits has also occurred without a corresponding change in behaviour. When analogous rhythmic behaviours have evolved independently, it has generally been with different neural mechanisms. Repeated evolution of particular rhythmic behaviours has occurred within some lineages due to parallel evolution or latent CPGs. Particular motor pattern generating mechanisms have also evolved independently in separate lineages. The evolution of CPGs and rhythmic behaviours shows that although most behaviours and neural circuits are highly conserved, the nature of the behaviour does not dictate the neural mechanism and that the presence of homologous neural components does not determine the behaviour. This suggests that although behaviour is generated by neural circuits, natural selection can act separately on these two levels of biological organization. PMID:26598733

  4. Temperature-dependent regulation of vocal pattern generator.

    PubMed

    Yamaguchi, Ayako; Gooler, David; Herrold, Amy; Patel, Shailja; Pong, Winnie W

    2008-12-01

    Vocalizations of Xenopus laevis are generated by central pattern generators (CPGs). The advertisement call of male X. laevis is a complex biphasic motor rhythm consisting of fast and slow trills (a train of clicks). We found that the trill rate of these advertisement calls is sensitive to temperature and that this rate modification of the vocal rhythms originates in the central pattern generators. In vivo the rates of fast and slow trills increased linearly with an increase in temperature. In vitro a similar linear relation between temperature and compound action potential frequency in the laryngeal nerve was found when fictive advertisement calls were evoked in the isolated brain. Temperature did not limit the contractile properties of laryngeal muscles within the frequency range of vocalizations. We next took advantage of the temperature sensitivity of the vocal CPG in vitro to localize the source of the vocal rhythms. We focused on the dorsal tegmental area of the medulla (DTAM), a brain stem nucleus that is essential for vocal production. We found that bilateral cooling of DTAM reduced both fast and slow trill rates. Thus we conclude that DTAM is a source of biphasic vocal rhythms. PMID:18829853

  5. Development patterns of executive functions in children.

    PubMed

    Juric, Lorena Canet; Richards, María M; Introzzi, Isabel; Andrés, María Laura; Urquijo, Sebastián

    2013-01-01

    Executive Functions (EF) exercise control over an individual's conduct and thinking through a set of functionally independent processes, among which are cognitive flexibility (reactive and spontaneous), working memory and planning. The development patterns of these components appear to have stages of acceleration and deceleration during childhood. Studies analyzing their development in Spanish-speaking children were not found in our area. Therefore, this study will analyze the development patterns of the cited executive functions with the objective of establishing relationships and comparisons, and identifying the stages of acceleration and stagnation for each component. The study's sample consists of 274 schoolchildren between the ages of 6 and 8 (119 in first grade, 61 in second grade and 94 in third grade). Participants were evaluated using the following instruments from the Neuropsychological Assessment of Children test battery (known by the acronym ENI in Spanish): Verbal Fluency (semantic and phonemic); Cognitive Flexibility; Mexican Pyramid; and Backward Digit Span. Three different development patterns were detected, as well as different interactions between the executive components. Additionally, three empirical types were established based on the patterns and relationships between components. PMID:23866237

  6. Vapor-Generator Wand Helps To Reveal Airflow Patterns

    NASA Technical Reports Server (NTRS)

    Robelen, David B.

    1993-01-01

    In vapor-generator wand, liquid propylene glycol flows into electrically heated stainless-steel tube. Liquid boils in heated tube, and emerging vapor forms dense, smoke-like fog used to make airflow patterns visible. Built in variety of sizes, suitable for uses ranging from tabletop demonstrations to research in wind tunnels. For best viewing, plume illuminated by bright, focused incandescent spotlight at right angle to viewing direction. Viewing further enhanced by coating walls of test chamber with flat, dark color to minimize reflections and increase contrast.

  7. Using pattern enumeration to accelerate process development and ramp yield

    NASA Astrophysics Data System (ADS)

    Zhuang, Linda; Pang, Jenny; Xu, Jessy; Tsai, Mengfeng; Wang, Amy; Zhang, Yifan; Sweis, Jason; Lai, Ya-Chieh; Ding, Hua

    2016-03-01

    During a new technology node process setup phase, foundries do not initially have enough product chip designs to conduct exhaustive process development. Different operational teams use manually designed simple test keys to set up their process flows and recipes. When the very first version of the design rule manual (DRM) is ready, foundries enter the process development phase where new experiment design data is manually created based on these design rules. However, these IP/test keys contain very uniform or simple design structures. This kind of design normally does not contain critical design structures or process unfriendly design patterns that pass design rule checks but are found to be less manufacturable. It is desired to have a method to generate exhaustive test patterns allowed by design rules at development stage to verify the gap of design rule and process. This paper presents a novel method of how to generate test key patterns which contain known problematic patterns as well as any constructs which designers could possibly draw based on current design rules. The enumerated test key patterns will contain the most critical design structures which are allowed by any particular design rule. A layout profiling method is used to do design chip analysis in order to find potential weak points on new incoming products so fab can take preemptive action to avoid yield loss. It can be achieved by comparing different products and leveraging the knowledge learned from previous manufactured chips to find possible yield detractors.

  8. Note: A novel dielectric barrier discharge system for generating stable patterns in wide range

    NASA Astrophysics Data System (ADS)

    Liu, Weibo; Wang, Yongjie; Zhang, Hao; Pan, Yuyang; Dong, Lifang

    2016-05-01

    We develop a novel dielectric barrier discharge (DBD) system with a meshed water electrode to generate stable square superlattice patterns (MSSP) in Ar/air mixture in a wide range of experimental environments. Discharge scenarios with the applied voltage increasing in the meshed DBD and ordinary DBD are presented respectively under the same experimental conditions. It is found that a square pattern and MSSP can be obtained stably and easily in meshed DBD, while no pattern emerges in ordinary DBD. MSSP can be formed when the Ar content is from 0% to 70%, and the corresponding applied voltage decreases with Ar content increasing. Results based on optical methods show that MSSP is generated by artificially designed electrodes together with nonlinear characteristics of DBD, which may account for why patterns in meshed DBD exist in a wide range.

  9. Note: A novel dielectric barrier discharge system for generating stable patterns in wide range.

    PubMed

    Liu, Weibo; Wang, Yongjie; Zhang, Hao; Pan, Yuyang; Dong, Lifang

    2016-05-01

    We develop a novel dielectric barrier discharge (DBD) system with a meshed water electrode to generate stable square superlattice patterns (MSSP) in Ar/air mixture in a wide range of experimental environments. Discharge scenarios with the applied voltage increasing in the meshed DBD and ordinary DBD are presented respectively under the same experimental conditions. It is found that a square pattern and MSSP can be obtained stably and easily in meshed DBD, while no pattern emerges in ordinary DBD. MSSP can be formed when the Ar content is from 0% to 70%, and the corresponding applied voltage decreases with Ar content increasing. Results based on optical methods show that MSSP is generated by artificially designed electrodes together with nonlinear characteristics of DBD, which may account for why patterns in meshed DBD exist in a wide range. PMID:27250476

  10. Sequentially firing neurons confer flexible timing in neural pattern generators

    SciTech Connect

    Urban, Alexander; Ermentrout, Bard

    2011-05-15

    Neuronal networks exhibit a variety of complex spatiotemporal patterns that include sequential activity, synchrony, and wavelike dynamics. Inhibition is the primary means through which such patterns are implemented. This behavior is dependent on both the intrinsic dynamics of the individual neurons as well as the connectivity patterns. Many neural circuits consist of networks of smaller subcircuits (motifs) that are coupled together to form the larger system. In this paper, we consider a particularly simple motif, comprising purely inhibitory interactions, which generates sequential periodic dynamics. We first describe the dynamics of the single motif both for general balanced coupling (all cells receive the same number and strength of inputs) and then for a specific class of balanced networks: circulant systems. We couple these motifs together to form larger networks. We use the theory of weak coupling to derive phase models which, themselves, have a certain structure and symmetry. We show that this structure endows the coupled system with the ability to produce arbitrary timing relationships between symmetrically coupled motifs and that the phase relationships are robust over a wide range of frequencies. The theory is applicable to many other systems in biology and physics.

  11. Developing Signal-Pattern-Recognition Programs

    NASA Technical Reports Server (NTRS)

    Shelton, Robert O.; Hammen, David

    2006-01-01

    Pattern Interpretation and Recognition Application Toolkit Environment (PIRATE) is a block-oriented software system that aids the development of application programs that analyze signals in real time in order to recognize signal patterns that are indicative of conditions or events of interest. PIRATE was originally intended for use in writing application programs to recognize patterns in space-shuttle telemetry signals received at Johnson Space Center's Mission Control Center: application programs were sought to (1) monitor electric currents on shuttle ac power busses to recognize activations of specific power-consuming devices, (2) monitor various pressures and infer the states of affected systems by applying a Kalman filter to the pressure signals, (3) determine fuel-leak rates from sensor data, (4) detect faults in gyroscopes through analysis of system measurements in the frequency domain, and (5) determine drift rates in inertial measurement units by regressing measurements against time. PIRATE can also be used to develop signal-pattern-recognition software for different purposes -- for example, to monitor and control manufacturing processes.

  12. A Single Input Change Test Pattern Generator for Sequential Circuits

    NASA Astrophysics Data System (ADS)

    Liang, Feng; Lei, Shaochong; Shao, Zhibiao

    An optimized Built-In Self-Test technology is proposed in this paper. A simplified algebraic model is developed to represent the configurations of single input change circuits. A novel single input change sequence generation technique is designed. It consists of a modified scan shift register, a seed storage array and a series of XOR gates. This circuitry can automatically generate single input change sequences of more unique vectors. Experimental results based on the ISCAS-89 benchmark show that the proposed method can achieve high stuck-at fault coverage with low switching activity during test applications.

  13. Analog electronic model of the lobster pyloric central pattern generator

    NASA Astrophysics Data System (ADS)

    Volkovskii, A.; Brugioni, S.; Levi, R.; Rabinovich, M.; Selverston, A.; Abarbane, H. D. I.

    2005-01-01

    An electronic circuit intended to simulate the nonlinear dynamics of a simplified 3-cell model of the pyloric central pattern generator in California spiny lobster stomato gastric ganglion is presented. The model employs the synaptic phase locked loop (SPLL) concept where the frequency of oscillations of a postsynaptic cell is mainly controlled by the synaptic current which depends on the phase shift between the oscillations. The theoretical study showed that the system has a stable steady state with correct phase shifts between the oscillations and that this regime is stable when the frequency of the pacemaker cell is varied over a wide range. The main bifurcations in the system were studied analytically, in computer simulations, and in experiments with the electronic circuit. The experimental measurements are in good agreement with the expectations of the theoretical model.

  14. Generation of Earth's First-Order Biodiversity Pattern

    NASA Astrophysics Data System (ADS)

    Krug, Andrew Z.; Jablonski, David; Valentine, James W.; Roy, Kaustuv

    2009-02-01

    The first-order biodiversity pattern on Earth today and at least as far back as the Paleozoic is the latitudinal diversity gradient (LDG), a decrease in richness of species and higher taxa from the equator to the poles. LDGs are produced by geographic trends in origination, extinction, and dispersal over evolutionary timescales, so that analyses of static patterns will be insufficient to reveal underlying processes. The fossil record of marine bivalve genera, a model system for the analysis of biodiversity dynamics over large temporal and spatial scales, shows that an origination and range-expansion gradient plays a major role in generating the LDG. Peak origination rates and peak diversities fall within the tropics, with range expansion out of the tropics the predominant spatial dynamic thereafter. The origination-diversity link occurs even in a "contrarian" group whose diversity peaks at midlatitudes, an exception proving the rule that spatial variations in origination are key to latitudinal diversity patterns. Extinction rates are lower in polar latitudes (≥60°) than in temperate zones and thus cannot create the observed gradient alone. They may, however, help to explain why origination and immigration are evidently damped in higher latitudes. We suggest that species require more resources in higher latitudes, for the seasonality of primary productivity increases by more than an order of magnitude from equatorial to polar regions. Higher-latitude species are generalists that, unlike potential immigrants, are adapted to garner the large share of resources required for incumbency in those regions. When resources are opened up by extinctions, lineages spread chiefly poleward and chiefly through speciation.

  15. National Development Generates National Identities

    PubMed Central

    2016-01-01

    The purpose of the article is to test the relationship between national identities and modernisation. We test the hypotheses that not all forms of identity are equally compatible with modernisation as measured by Human Development Index. The less developed societies are characterised by strong ascribed national identities based on birth, territory and religion, but also by strong voluntarist identities based on civic features selected and/or achieved by an individual. While the former decreases with further modernisation, the latter may either decrease or remain at high levels and coexist with instrumental supranational identifications, typical for the most developed countries. The results, which are also confirmed by multilevel regression models, thus demonstrate that increasing modernisation in terms of development contributes to the shifts from classical, especially ascribed, identities towards instrumental identifications. These findings are particularly relevant in the turbulent times increasingly dominated by the hardly predictable effects of the recent mass migrations. PMID:26841050

  16. Fus Expression Patterns in Developing Tooth

    PubMed Central

    Kim, Eun-Jung; Lee, Jong-Min; Jung, Han-Sung

    2013-01-01

    Recently, the RNA/DNA-binding protein FUS, Fused in sarcoma, was shown to play a role in growth, differentiation, and morphogenesis in vertebrates. Because little is known about Fus, we investigated its expression pattern in murine tooth development. In situ hybridization of mouse mandibles at specific developmental stages was performed with a DIG-labeled RNA probe. During early tooth development, Fus was detected in the dental epithelium and dental mesenchyme at 11 days postcoitum (dpc) and 12 dpc. From 14 dpc, Fus was strongly expressed in the dental papilla and the cervical loop of the dental epithelium. At postnatal day 4 (PN4), Fus expression was observed in the odontoblasts, ameloblasts, the proliferation zone of the pulp, and the cervical loop. At PN14, the expression pattern of Fus was found to be maintained in the odontoblasts and the proliferation zone of the pulp. Furthermore, Fus expression was especially strong in the Hertwig’s epithelial root sheath (HERS). Therefore, this study suggests that Fus may play a role in the HERS during root development. PMID:25949136

  17. Pattern formation during early floral development.

    PubMed

    Vaddepalli, Prasad; Scholz, Sebastian; Schneitz, Kay

    2015-06-01

    Flowers are central to sexual reproduction in plants. The study of floral development proved tremendously successful in obtaining key insight into processes, such as fate determination, pattern formation, and growth regulation. Recent advances relate to the complex mechanisms underlying the crosstalk between phytohormone signaling, cell and tissue mechanics, and regulatory gene networks that positions floral buds at the apex and directs floral specification, initiation and outgrowth. Furthermore, progress has been made in elucidating the intercellular communication and temporal coordination necessary to organize the behavior of the various functional subdomains within the young flower. PMID:25687790

  18. Synergistic action of nectins and cadherins generates the mosaic cellular pattern of the olfactory epithelium

    PubMed Central

    Katsunuma, Sayaka; Honda, Hisao; Shinoda, Tomoyasu; Ishimoto, Yukitaka; Miyata, Takaki; Kiyonari, Hiroshi; Abe, Takaya; Nibu, Ken-ichi; Takai, Yoshimi

    2016-01-01

    In the olfactory epithelium (OE), olfactory cells (OCs) and supporting cells (SCs), which express different cadherins, are arranged in a characteristic mosaic pattern in which OCs are enclosed by SCs. However, the mechanism underlying this cellular patterning is unclear. Here, we show that the cellular pattern of the OE is established by cellular rearrangements during development. In the OE, OCs express nectin-2 and N-cadherin, and SCs express nectin-2, nectin-3, E-cadherin, and N-cadherin. Heterophilic trans-interaction between nectin-2 on OCs and nectin-3 on SCs preferentially recruits cadherin via α-catenin to heterotypic junctions, and the differential distributions of cadherins between junctions promote cellular intercalations, resulting in the formation of the mosaic pattern. These observations are confirmed by model cell systems, and various cellular patterns are generated by the combinatorial expression of nectins and cadherins. Collectively, the synergistic action of nectins and cadherins generates mosaic pattern, which cannot be achieved by a single mechanism. PMID:26929452

  19. Improved photomask accuracy with a high-productivity DUV laser pattern generator

    NASA Astrophysics Data System (ADS)

    Öström, Thomas; Måhlén, Jonas; Karawajczyk, Andrzej; Rosling, Mats; Carlqvist, Per; Askebjer, Per; Karlin, Tord; Sallander, Jesper; Österberg, Anders

    2006-10-01

    A strategy for sub-100 nm technology nodes is to maximize the use of high-speed deep-UV laser pattern generators, reserving e-beam tools for the most critical photomask layers. With a 248 nm excimer laser and 0.82 NA projection optics, the Sigma7500 increases the application space of laser pattern generators. A programmable spatial light modulator (SLM) is imaged with partially coherent optics to compose the photomask pattern. Image profiles are enhanced with phase shifting in the pattern generator, and features below 200 nm are reliably printed. The Sigma7500 extends the SLM-based architecture with improvements to CD uniformity and placement accuracy, resulting from an error budget-based methodology. Among these improvements is a stiffer focus stage design with digital servos, resulting in improved focus stability. Tighter climate controls and improved dose control reduce drift during mask patterning. As a result, global composite CD uniformity below 5 nm (3σ) has been demonstrated, with placement accuracy below 10 nm (3σ) across the mask. Self-calibration methods are used to optimize and monitor system performance, reducing the need to print test plates. The SLM calibration camera views programmed test patterns, making it possible to evaluate image metrics such as CD uniformity and line edge roughness. The camera is also used to characterize image placement over the optical field. A feature called ProcessEqualizer TM has been developed to correct long-range CD errors arising from process effects on production photomasks. Mask data is sized in real time to compensate for pattern-dependent errors related to local pattern density, as well as for systematic pattern-independent errors such as radial CD signatures. Corrections are made in the pixel domain in the advanced adjustments processor, which also performs global biasing, stamp distortion compensation, and corner enhancement. In the Sigma7500, the mask pattern is imaged with full edge addressability in each

  20. Patterns of rock fragment cover generated by tillage erosion

    NASA Astrophysics Data System (ADS)

    Poesen, Jean; Wesemael, Bas van; Govers, Gerard; Martinez-Fernandez, José; Desmet, Philippe; Vandaele, Karel; Quine, Timothy; Degraer, Greet

    1997-03-01

    of rock fragments) by the tines of the duckfoot chisel also concentrates the largest rock fragments in the topsoil in such a way that a rock fragment mulch develops in narrow valleys and at the foot of the slopes. These results clearly indicate that tillage erosion is the main process responsible for the observed rock fragment cover pattern in the study area. Since the study area is representative for many parts of southern Spain where almond groves have expanded since 1970, the results have a wider application. They show to what extent intensive tillage of steep slopes has contributed to the increase in soil degradation, to changes in hillslope morphology (i.e. strong denudation of convexities, development of lynchets and rapid infilling of narrow valley bottoms) and to the development of rock fragment cover patterns which control the spatial variability of the hydrological and water erosion response within such landscapes.

  1. Mutual synchronization between structure and central pattern generator

    NASA Astrophysics Data System (ADS)

    Hongu, Junichi; Iba, Daisuke

    2012-04-01

    This paper shows an evaluating method of synchronization between a structure and Central Pattern Generators (CPGs), which are embedded in a controller designed for an active mass damper. A neural oscillator composing the CPGs has nonlinear and entrainment properties. Therefore, the proposed controller has possibility to exhibit the characteristic of robustness, when the structural parameters, i.e. stiffness or damping, are changed by earthquakes and the like. Our earlier studies have proposed the new controller and ascertained the efficacy of vibration suppression. However, there has been no study to evaluate the controller's above-mentioned properties. For tuning into practical application, the reliability and robustness along with the controller's vibration mitigation performance must be analyzed. In this paper, phase reduction theory is tried to appraise the synchronization between a structure and the CPGs. In this case, the synchronization between the target structure and a single neural oscillator constituting the CPGs is required to be investigated. Therefore, the single neural oscillator's the harmonization characteristic with sinusoidal input is firstly examined, and the synchronization region is expressed using phase response curves. In addition, the mutual synchronization between the structure and the single neural oscillator is studied under sinusoidal input using the result of the harmonization characteristic.

  2. Pattern Generator for Bench Test of Digital Boards

    NASA Technical Reports Server (NTRS)

    Berkun, Andrew C.; Chu, Anhua J.

    2012-01-01

    All efforts to develop electronic equipment reach a stage where they need a board test station for each board. The SMAP digital system consists of three board types that interact with each other using interfaces with critical timing. Each board needs to be tested individually before combining into the integrated digital electronics system. Each board needs critical timing signals from the others to be able to operate. A bench test system was developed to support test of each board. The test system produces all the outputs of the control and timing unit, and is delivered much earlier than the timing unit. Timing signals are treated as data. A large file is generated containing the state of every timing signal at any instant. This file is streamed out to an IO card, which is wired directly to the device-under-test (DUT) input pins. This provides a flexible test environment that can be adapted to any of the boards required to test in a standalone configuration. The problem of generating the critical timing signals is then transferred from a hardware problem to a software problem where it is more easily dealt with.

  3. Morphodynamics and anabranching patterns generated in the Madeira River, Brazil

    NASA Astrophysics Data System (ADS)

    Latrubesse, E. M.; Bonthius, C.; Abad, J. D.; Stevaux, J.; Filizola, N.; Frias, C. E.

    2013-12-01

    developing downstream a straight single channel reach; and c) branches in sinuous-second order lateral channels. Velocity maps and an analysis of secondary currents provide information on the three-dimensional flows of water within the channel indicating that bed and channel morphology affect hydraulic characteristics. Several cross sections present unusually deep pools up to ~80m depth in the outer bank and significant increases in the local water slope. These are related to geological constraints, which manifest in the over deepening from the preferentially downwards secondary flow, exacerbating erosion. The anabranching patterns in large rivers such as the Madeira are not just controlled by intrinsic morphodynamics and hydraulic geometry variables but though a variety of interactions with the architecture of the floodplain and the control exerted by older fluvial geomorphological units.

  4. The large contour data generation from divided image of photomask pattern of 32 nm and beyond

    NASA Astrophysics Data System (ADS)

    Murakawa, Tsutomu; Ogiso, Yoshiaki; Iwai, Toshimichi; Matsumoto, Jun; Nakamura, Takayuki

    2010-05-01

    The application of Mask CD-SEM for process management of photomask using two dimensional measurements as photomask patterns become smaller and more complex, [1]. Also, WPI technology application using an optical Mask inspection tool simulates wafer plane images using photomask images [2]. In order to simulate the MEEF influence for aggressive OPC and High-end photomask patterns in 32nm node and beyond, a requirement exists for wide Field of View (FOV) GDS data and tone information generated from high precision SEM images. In light of these requirements, we developed a GDS data extraction algorithm with sub-nanometer accuracy using wide FOV images, for example, greater than 10um square. As a result, we over come the difficulty of generating large contour data without the distortion that is normally associated with acquired SEM images. Also, it will be shown that the evaluation result can be effective for 32 nm applications and beyond using Mask CD-SEM E3620 manufactured by Advantest. On the other hand, we investigate the application example of the wide FOV GDS data. In order to easily compare the acquired GDS data with design data, we explain the separate algorithm with three layer structures for Tri-tone (Ternary) photomask pattern, consisting of an outer pattern and another pattern.

  5. Positive Selection Linked with Generation of Novel Mammalian Dentition Patterns.

    PubMed

    Machado, João Paulo; Philip, Siby; Maldonado, Emanuel; O'Brien, Stephen J; Johnson, Warren E; Antunes, Agostinho

    2016-01-01

    A diverse group of genes are involved in the tooth development of mammals. Several studies, focused mainly on mice and rats, have provided a detailed depiction of the processes coordinating tooth formation and shape. Here we surveyed 236 tooth-associated genes in 39 mammalian genomes and tested for signatures of selection to assess patterns of molecular adaptation in genes regulating mammalian dentition. Of the 236 genes, 31 (∼13.1%) showed strong signatures of positive selection that may be responsible for the phenotypic diversity observed in mammalian dentition. Mammalian-specific tooth-associated genes had accelerated mutation rates compared with older genes found across all vertebrates. More recently evolved genes had fewer interactions (either genetic or physical), were associated with fewer Gene Ontology terms and had faster evolutionary rates compared with older genes. The introns of these positively selected genes also exhibited accelerated evolutionary rates, which may reflect additional adaptive pressure in the intronic regions that are associated with regulatory processes that influence tooth-gene networks. The positively selected genes were mainly involved in processes like mineralization and structural organization of tooth specific tissues such as enamel and dentin. Of the 236 analyzed genes, 12 mammalian-specific genes (younger genes) provided insights on diversification of mammalian teeth as they have higher evolutionary rates and exhibit different expression profiles compared with older genes. Our results suggest that the evolution and development of mammalian dentition occurred in part through positive selection acting on genes that previously had other functions. PMID:27613398

  6. The generation of antiphase oscillations and synchrony by a rebound-based vertebrate central pattern generator.

    PubMed

    Li, Wen-Chang; Merrison-Hort, Robert; Zhang, Hong-Yan; Borisyuk, Roman

    2014-04-23

    Many neural circuits are capable of generating multiple stereotyped outputs after different sensory inputs or neuromodulation. We have previously identified the central pattern generator (CPG) for Xenopus tadpole swimming that involves antiphase oscillations of activity between the left and right sides. Here we analyze the cellular basis for spontaneous left-right motor synchrony characterized by simultaneous bursting on both sides at twice the swimming frequency. Spontaneous synchrony bouts are rare in most tadpoles, and they instantly emerge from and switch back to swimming, most frequently within the first second after skin stimulation. Analyses show that only neurons that are active during swimming fire action potentials in synchrony, suggesting both output patterns derive from the same neural circuit. The firing of excitatory descending interneurons (dINs) leads that of other types of neurons in synchrony as it does in swimming. During synchrony, the time window between phasic excitation and inhibition is 7.9 ± 1 ms, shorter than that in swimming (41 ± 2.3 ms). The occasional, extra midcycle firing of dINs during swimming may initiate synchrony, and mismatches of timing in the left and right activity can switch synchrony back to swimming. Computer modeling supports these findings by showing that the same neural network, in which reciprocal inhibition mediates rebound firing, can generate both swimming and synchrony without circuit reconfiguration. Modeling also shows that lengthening the time window between phasic excitation and inhibition by increasing dIN synaptic/conduction delay can improve the stability of synchrony. PMID:24760866

  7. A rule-based expert system for automatic control rod pattern generation for boiling water reactors

    SciTech Connect

    Lin, L.S.; Lin, C. )

    1991-07-01

    This paper reports on an expert system for generating control rod patterns that has been developed. The knowledge is transformed into IF-THEN rules. The inference engine uses the Rete pattern matching algorithm to match facts, and rule premises and conflict resolution strategies to make the system function intelligently. A forward-chaining mechanism is adopted in the inference engine. The system is implemented in the Common Lisp programming language. The three-dimensional core simulation model performs the core status and burnup calculations. The system is successfully demonstrated by generating control rod programming for the 2894-MW (thermal) Kuosheng nuclear power plant in Taiwan. The computing time is tremendously reduced compared to programs using mathematical methods.

  8. Two-phase Flow Patterns in High Temperature Generator of Absorption Chiller / Heater

    NASA Astrophysics Data System (ADS)

    Furukawa, Masahiro; Kanuma, Hitoshi; Sekoguchi, Kotohiko; Takeishi, Masayuki

    There is a lack of information about vapor-liquid two-phase flow patterns determined using void signals in high temperature generator of absorption chiller/heater. Sensing void fraction has been hampered because lithium bromide aqueous solution of strong alkalinity is employed as working fluid at high temperature and high level of vacuum. New void sensor applicable to such difficult conditions was developed. The void Fractions at 48 locations in a high temperature generator were measured simultaneously in both cooling and heating operations. Analysis of void signals detected reveals that the most violent boiling occurs at the upper part of rear plate of combustion chamber and the first line of vertical tubes located in the flue. The flow patterns are strongly affected by the system pressure difference between the cooling and heating operations: there appear bubbly, slug and froth flows in the cooling operation, but only bubbly flow in the heating operation.

  9. Association of spectral development patterns with development stages of corn

    NASA Technical Reports Server (NTRS)

    Crist, E. P. (Principal Investigator)

    1982-01-01

    Association is made between the development stages of corn as defined by Hanway and the temporal-spectral development pattern of corn in a transformed data space derived from Landsat-MSS band reflectance values, using field-collected reflectance and associated data. Results indicate that the spectral vegetation index used (a reflectance equivalent of Tasseled Cap Greenness) reaches a maximum well before the stage at which corn is expected to achieve its peak leaf area index. Possible physiological and canopy geometry related causes for this and other results are presented.

  10. NeuroPG: open source software for optical pattern generation and data acquisition

    PubMed Central

    Avants, Benjamin W.; Murphy, Daniel B.; Dapello, Joel A.; Robinson, Jacob T.

    2015-01-01

    Patterned illumination using a digital micromirror device (DMD) is a powerful tool for optogenetics. Compared to a scanning laser, DMDs are inexpensive and can easily create complex illumination patterns. Combining these complex spatiotemporal illumination patterns with optogenetics allows DMD-equipped microscopes to probe neural circuits by selectively manipulating the activity of many individual cells or many subcellular regions at the same time. To use DMDs to study neural activity, scientists must develop specialized software to coordinate optical stimulation patterns with the acquisition of electrophysiological and fluorescence data. To meet this growing need we have developed an open source optical pattern generation software for neuroscience—NeuroPG—that combines, DMD control, sample visualization, and data acquisition in one application. Built on a MATLAB platform, NeuroPG can also process, analyze, and visualize data. The software is designed specifically for the Mightex Polygon400; however, as an open source package, NeuroPG can be modified to incorporate any data acquisition, imaging, or illumination equipment that is compatible with MATLAB’s Data Acquisition and Image Acquisition toolboxes. PMID:25784873

  11. A Compartmental Lateral Inhibition System to Generate Contrasting Patterns

    PubMed Central

    Rufino Ferreira, Ana S.; Hsia, Justin; Arcak, Murat

    2015-01-01

    We propose a lateral inhibition system and analyze contrasting patterns of gene expression. The system consists of a set of compartments interconnected by channels. Each compartment contains a colony of cells that produce diffusible molecules to be detected by the neighboring colonies. Each cell is equipped with an inhibitory circuit that reduces its production when the detected signal is sufficiently strong. We characterize the parameter range in which steady-state patterns emerge. PMID:26665158

  12. Key Bifurcations of Bursting Polyrhythms in 3-Cell Central Pattern Generators

    PubMed Central

    Wojcik, Jeremy; Schwabedal, Justus; Clewley, Robert; Shilnikov, Andrey L.

    2014-01-01

    We identify and describe the key qualitative rhythmic states in various 3-cell network motifs of a multifunctional central pattern generator (CPG). Such CPGs are neural microcircuits of cells whose synergetic interactions produce multiple states with distinct phase-locked patterns of bursting activity. To study biologically plausible CPG models, we develop a suite of computational tools that reduce the problem of stability and existence of rhythmic patterns in networks to the bifurcation analysis of fixed points and invariant curves of a Poincaré return maps for phase lags between cells. We explore different functional possibilities for motifs involving symmetry breaking and heterogeneity. This is achieved by varying coupling properties of the synapses between the cells and studying the qualitative changes in the structure of the corresponding return maps. Our findings provide a systematic basis for understanding plausible biophysical mechanisms for the regulation of rhythmic patterns generated by various CPGs in the context of motor control such as gait-switching in locomotion. Our analysis does not require knowledge of the equations modeling the system and provides a powerful qualitative approach to studying detailed models of rhythmic behavior. Thus, our approach is applicable to a wide range of biological phenomena beyond motor control. PMID:24739943

  13. Compact neutron generator development at LBNL

    SciTech Connect

    Reijonen, J.; English, G.; Firestone, R.; Giquel, F.; King, M.; Leung, K-N.; Sun, M.

    2003-12-31

    A wide variety of applications ranging from medical (BNCT, Boron Neutron Capture Therapy) and basic science (neutron imaging, material studies) to homeland security (explosive detection and nuclear material non-proliferation) are in need of compact, high flux neutron generators. The Plasma and Ion Source Technology Group in the Lawrence Berkeley National Laboratory is developing various neutron generators for these applications. These neutron generators employed either the D-D or the D-T fusion reaction for the neutron production. The deuterium or deuterium-tritium gas mixture is ionized in an RF-driven plasma source. The ions are then accelerated to {approx}100 keV energy using high current, high voltage DC-power supply to a target where the 2.45 MeV (for D-D reaction) or 14 MeV (for the D-T reaction) neutrons are generated. The development of two different types of neutron tubes are being discussed in this presentation, namely compact, pulsed operation neutron generators and cw, high yield neutron generators. These generators are currently operating at D-D neutron yields of 108 n/s and 109 n/s respectively. A facility, incorporating the larger neutron generator, has been constructed for Prompt Gamma Activation Analysis (PGAA) and Neutron Activation Analysis (NAA) measurements.

  14. Career Development and Emerging Managerial Career Patterns.

    ERIC Educational Resources Information Center

    Grzeda, Maurice

    1999-01-01

    Career-motivation theory provides a new framework for managerial careers in the context of contemporary career patterns. The framework includes the concepts of career resilience, career insight, and career identity. (SK)

  15. Vesicular glutamate transporter 2 is required for central respiratory rhythm generation but not for locomotor central pattern generation.

    PubMed

    Wallén-Mackenzie, Asa; Gezelius, Henrik; Thoby-Brisson, Muriel; Nygård, Anna; Enjin, Anders; Fujiyama, Fumino; Fortin, Gilles; Kullander, Klas

    2006-11-22

    Glutamatergic excitatory neurotransmission is dependent on glutamate release from presynaptic vesicles loaded by three members of the solute carrier family, Slc17a6-8, which function as vesicular glutamate transporters (VGLUTs). Here, we show that VGLUT2 (Slc17a6) is required for life ex utero. Vglut2 null mutant mice die immediately after birth because of the absence of respiratory behavior. Investigations at embryonic stages revealed that neural circuits in the location of the pre-Bötzinger (PBC) inspiratory rhythm generator failed to become active. However, neurons with bursting pacemaker properties and anatomical integrity of the PBC area were preserved. Vesicles at asymmetric synapses were fewer and malformed in the Vglut2 null mutant hindbrain, probably causing the complete disruption of AMPA/kainate receptor-mediated synaptic activity in mutant PBC cells. The functional deficit results from an inability of PBC neurons to achieve synchronous activation. In contrast to respiratory rhythm generation, the locomotor central pattern generator of Vglut2 null mutant mice displayed normal rhythmic and coordinated activity, suggesting differences in their operating principles. Hence, the present study identifies VGLUT2-mediated signaling as an obligatory component of the developing respiratory rhythm generator. PMID:17122055

  16. Spin wave excitation patterns generated by spin torque oscillators

    NASA Astrophysics Data System (ADS)

    Macià, F.; Hoppensteadt, F. C.; Kent, A. D.

    2014-01-01

    Spin torque nano-oscillators (STNO) are nanoscale devices that can convert a direct current into short wavelength spin wave excitations in a ferromagnetic layer. We show that arrays of STNO can be used to create directional spin wave radiation similarly to electromagnetic antennas. Combining STNO excitations with planar spin waves also creates interference patterns. We show that these interference patterns are static and have information on the wavelength and phase of the spin waves emitted from the STNO. We describe a means of actively controlling spin wave radiation patterns with the direct current flowing through STNO, which is useful in on-chip communication and information processing and could be a promising technique for studying short wavelength spin waves in different materials.

  17. Vortex Generator Model Developed for Turbomachinery

    NASA Technical Reports Server (NTRS)

    Chima, Rodrick V.

    2002-01-01

    A computational model was developed at the NASA Glenn Research Center to investigate possible uses of vortex generators (VG's) for improving the performance of turbomachinery. A vortex generator is a small, winglike device that generates vortices at its tip. The vortices mix high-speed core flow with low-speed boundary layer flow and, thus, can be used to delay flow separation. VG's also turn the flow near the walls and, thus, can be used to control flow incidence into a turbomachinery blade row or to control secondary flows.

  18. A mesh generation and machine learning framework for Drosophila gene expression pattern image analysis

    PubMed Central

    2013-01-01

    Background Multicellular organisms consist of cells of many different types that are established during development. Each type of cell is characterized by the unique combination of expressed gene products as a result of spatiotemporal gene regulation. Currently, a fundamental challenge in regulatory biology is to elucidate the gene expression controls that generate the complex body plans during development. Recent advances in high-throughput biotechnologies have generated spatiotemporal expression patterns for thousands of genes in the model organism fruit fly Drosophila melanogaster. Existing qualitative methods enhanced by a quantitative analysis based on computational tools we present in this paper would provide promising ways for addressing key scientific questions. Results We develop a set of computational methods and open source tools for identifying co-expressed embryonic domains and the associated genes simultaneously. To map the expression patterns of many genes into the same coordinate space and account for the embryonic shape variations, we develop a mesh generation method to deform a meshed generic ellipse to each individual embryo. We then develop a co-clustering formulation to cluster the genes and the mesh elements, thereby identifying co-expressed embryonic domains and the associated genes simultaneously. Experimental results indicate that the gene and mesh co-clusters can be correlated to key developmental events during the stages of embryogenesis we study. The open source software tool has been made available at http://compbio.cs.odu.edu/fly/. Conclusions Our mesh generation and machine learning methods and tools improve upon the flexibility, ease-of-use and accuracy of existing methods. PMID:24373308

  19. Generation of spatially periodic patterns by a mechanical instability: a mechanical alternative to the Turing model.

    PubMed

    Harris, A K; Stopak, D; Warner, P

    1984-04-01

    We have studied the generation of spatial patterns created by mechanical (rather than chemical) instabilities. When dissociated fibroblasts are suspended in a gel of reprecipitated collagen, and the contraction of the gel as a whole is physically restrained by attachment of its margin to a glass fibre meshwork, then the effect of the fibroblasts' traction is to break up the cell-matrix mixture into a series of clumps or aggregations of cells and compressed matrix. These aggregations are interconnected by linear tracts of collagen fibres aligned under the tensile stress exerted by fibroblast traction. The patterns generated by this mechanical instability vary depending upon cell population density and other factors. Over a certain range of cell concentrations, this mechanical instability yields geometric patterns which resemble but are usually much less regular than the patterns which develop normally in the dermis of developing bird skin. We propose that an equivalent mechanical instability, occurring during the embryonic development of this skin, could be the cause not only of the clumping of dermal fibroblasts to form the feather papillae, but also of the alignment of collagen fibres into the characteristic polygonal network of fibre bundles - which interconnect these papillae and which presage the subsequent pattern of the dermal muscles serving to control feather movements. More generally, we suggest that this type of mechanical instability can serve the morphogenetic functions for which Turing's chemical instability and other reaction-diffusion systems have been proposed. Mechanical instabilities can create physical structures directly, in one step, in contrast to the two or more steps which would be required if positional information first had to be specified by chemical gradients and then only secondarily implemented in physical form. In addition, physical forces can act more quickly and at much longer range than can diffusing chemicals and can generate a

  20. Fourth-generation photovoltaic concentrator system development

    SciTech Connect

    O`Neill, M.J.; McDanal, A.J.

    1995-10-01

    In 1991, under a contract with Sandia for the Concentrator Initiative, the ENTECH team initiated the design and development of a fourth-generation concentrator module. In 1992, Sandia also contracted with ENTECH to develop a new control and drive system for the ENTECH array. This report documents the design and development work performed under both contracts. Manufacturing processes for the new module were developed at the same time under a complementary PVMaT contract with the National Renewable Energy Laboratory. Two 100-kW power plants were deployed in 1995 in Texas using the newly developed fourth-generation concentrator technology, one at the CSW Solar Park near Ft. Davis and one at TUE Energy Park in Dallas. Technology developed under the Sandia contracts has made a successful transition from the laboratory to the production line to the field.

  1. Polychromatic Optical Vortex Generation from Patterned Cholesteric Liquid Crystals

    NASA Astrophysics Data System (ADS)

    Kobashi, Junji; Yoshida, Hiroyuki; Ozaki, Masanori

    2016-06-01

    Generation of optical vortices is described in cholesteric liquid crystals with a singular point in the spatial distribution of a helix phase. The phenomenon uses the fact that a Bragg reflected light phase varies in proportion to the spatial phase of the helix, both at normal and oblique incidences. Our proposal enables high-efficiency, polychromatic generation of optical vortices without the need of a cumbersome fabrication process and fine-tuning.

  2. Polychromatic Optical Vortex Generation from Patterned Cholesteric Liquid Crystals.

    PubMed

    Kobashi, Junji; Yoshida, Hiroyuki; Ozaki, Masanori

    2016-06-24

    Generation of optical vortices is described in cholesteric liquid crystals with a singular point in the spatial distribution of a helix phase. The phenomenon uses the fact that a Bragg reflected light phase varies in proportion to the spatial phase of the helix, both at normal and oblique incidences. Our proposal enables high-efficiency, polychromatic generation of optical vortices without the need of a cumbersome fabrication process and fine-tuning. PMID:27391724

  3. Methods for generating hydroelectric power development alternatives

    SciTech Connect

    Chang, Shoou-yuh; Liaw, Shu-liang; Sale, M.J.; Railsback, S.F.

    1989-01-01

    Hydropower development on large rivers can result in a number of environmental impacts, including potential reductions in dissolved oxygen (DO) concentrations. This study presents a methodology for generating different hydropower development alternatives for evaluation. This methodology employs a Streeter-Phelps model to simulate DO, and the Bounded Implicit Enumeration algorithm to solve an optimization model formulated to maximize hydroelectric energy production subject to acceptable DO limits. The upper Ohio River basin was used to illustrate the use and characteristics of the methodology. The results indicate that several alternatives which meet the specified DO constraints can be generated efficiently, meeting both power and environmental objectives. 17 refs., 2 figs., 1 tab.

  4. Microstencils to generate defined, multi-species patterns of bacteria

    SciTech Connect

    Doktycz, Mitchel J.; Retterer, Scott T.; Pelletier, Dale A.; Timm, Collin M.; Hansen, Ryan R.

    2015-11-12

    Microbial communities are complex heterogeneous systems that are influenced by physical and chemical interactions with their environment, host, and community members. Techniques that facilitate the quantitative evaluation of how microscale organization influences the morphogenesis of multispecies communities could provide valuable insights into the dynamic behavior and organization of natural communities, the design of synthetic environments for multispecies culture, and the engineering of artificial consortia. In this work, we demonstrate a method for patterning microbes into simple arrangements that allow the quantitative measurement of growth dynamics as a function of their proximity to one another. The method combines parylene-based liftoff techniques with microfluidic delivery to simultaneously pattern multiple bacterial species with high viability using low-cost, customizable methods. Furthermore, quantitative measurements of bacterial growth for two competing isolates demonstrate that spatial coordination can play a critical role in multispecies growth and structure.

  5. Microstencils to generate defined, multi-species patterns of bacteria

    DOE PAGESBeta

    Doktycz, Mitchel J.; Retterer, Scott T.; Pelletier, Dale A.; Timm, Collin M.; Hansen, Ryan R.

    2015-11-12

    Microbial communities are complex heterogeneous systems that are influenced by physical and chemical interactions with their environment, host, and community members. Techniques that facilitate the quantitative evaluation of how microscale organization influences the morphogenesis of multispecies communities could provide valuable insights into the dynamic behavior and organization of natural communities, the design of synthetic environments for multispecies culture, and the engineering of artificial consortia. In this work, we demonstrate a method for patterning microbes into simple arrangements that allow the quantitative measurement of growth dynamics as a function of their proximity to one another. The method combines parylene-based liftoff techniquesmore » with microfluidic delivery to simultaneously pattern multiple bacterial species with high viability using low-cost, customizable methods. Furthermore, quantitative measurements of bacterial growth for two competing isolates demonstrate that spatial coordination can play a critical role in multispecies growth and structure.« less

  6. 32 nm imprint masks using variable shape beam pattern generators

    NASA Astrophysics Data System (ADS)

    Selinidis, Kosta; Thompson, Ecron; Schmid, Gerard; Stacey, Nick; Perez, Joseph; Maltabes, John; Resnick, Douglas J.; Yeo, Jeongho; Kim, Hoyeon; Eynon, Ben

    2008-05-01

    Imprint lithography has been included on the ITRS Lithography Roadmap at the 32, 22 and 16 nm nodes. Step and Flash Imprint Lithography (S-FIL ®) is a unique method that has been designed from the beginning to enable precise overlay for creating multilevel devices. A photocurable low viscosity monomer is dispensed dropwise to meet the pattern density requirements of the device, thus enabling imprint patterning with a uniform residual layer across a field and across entire wafers. Further, S-FIL provides sub-100 nm feature resolution without the significant expense of multi-element, high quality projection optics or advanced illumination sources. However, since the technology is 1X, it is critical to address the infrastructure associated with the fabrication of templates. For sub-32 nm device manufacturing, one of the major technical challenges remains the fabrication of full-field 1x templates with commercially viable write times. Recent progress in the writing of sub-40 nm patterns using commercial variable shape e-beam tools and non-chemically amplified resists has demonstrated a very promising route to realizing these objectives, and in doing so, has considerably strengthened imprint lithography as a competitive manufacturing technology for the sub 32nm node. Here we report the first imprinting results from sub-40 nm full-field patterns, using Samsung's current flash memory production device design. The fabrication of the template is discussed and the resulting critical dimension control and uniformity are discussed, along with image placement results. The imprinting results are described in terms of CD uniformity, etch results, and overlay.

  7. Compact neutron generator developement and applications

    SciTech Connect

    Leung, Ka-Ngo; Reijonen, Jani; Gicquel, Frederic; Hahto, Sami; Lou, Tak-Pui

    2004-01-18

    The Plasma and Ion Source Technology Group at the Lawrence Berkeley National Laboratory has been engaging in the development of high yield compact neutron generators for the last ten years. Because neutrons in these generators are formed by using either D-D, T-T or D-T fusion reaction, one can produce either mono-energetic (2.4 MeV or 14 MeV) or white neutrons. All the neutron generators being developed by our group utilize 13.5 MHz RF induction discharge to produce a pure deuterium or a mixture of deuterium-tritium plasma. As a result, ion beams with high current density and almost pure atomic ions can be extracted from the plasma source. The ion beams are accelerated to {approx}100 keV and neutrons are produced when the beams impinge on a titanium target. Neutron generators with different configurations and sizes have been designed and tested at LBNL. Their applications include neutron activation analysis, oil-well logging, boron neutron capture therapy, brachytherapy, cargo and luggage screening. A novel small point neutron source has recently been developed for radiography application. The source size can be 2 mm or less, making it possible to examine objects with sharper images. The performance of these neutron generators will be described in this paper.

  8. A central pattern generator producing alternative outputs: pattern, strength, and dynamics of premotor synaptic input to leech heart motor neurons.

    PubMed

    Norris, Brian J; Weaver, Adam L; Wenning, Angela; García, Paul S; Calabrese, Ronald L

    2007-11-01

    The central pattern generator (CPG) for heartbeat in medicinal leeches consists of seven identified pairs of segmental heart interneurons and one unidentified pair. Four of the identified pairs and the unidentified pair of interneurons make inhibitory synaptic connections with segmental heart motor neurons. The CPG produces a side-to-side asymmetric pattern of intersegmental coordination among ipsilateral premotor interneurons corresponding to a similarly asymmetric fictive motor pattern in heart motor neurons, and asymmetric constriction pattern of the two tubular hearts, synchronous and peristaltic. Using extracellular recordings from premotor interneurons and voltage-clamp recordings of ipsilateral segmental motor neurons in 69 isolated nerve cords, we assessed the strength and dynamics of premotor inhibitory synaptic output onto the entire ensemble of heart motor neurons and the associated conduction delays in both coordination modes. We conclude that premotor interneurons establish a stereotypical pattern of intersegmental synaptic connectivity, strengths, and dynamics that is invariant across coordination modes, despite wide variations among preparations. These data coupled with a previous description of the temporal pattern of premotor interneuron activity and relative phasing of motor neuron activity in the two coordination modes enable a direct assessment of how premotor interneurons through their temporal pattern of activity and their spatial pattern of synaptic connectivity, strengths, and dynamics coordinate segmental motor neurons into a functional pattern of activity. PMID:17804574

  9. Toward robust phase-locking in Melibe swim central pattern generator models

    NASA Astrophysics Data System (ADS)

    Jalil, Sajiya; Allen, Dane; Youker, Joseph; Shilnikov, Andrey

    2013-12-01

    Small groups of interneurons, abbreviated by CPG for central pattern generators, are arranged into neural networks to generate a variety of core bursting rhythms with specific phase-locked states, on distinct time scales, which govern vital motor behaviors in invertebrates such as chewing and swimming. These movements in lower level animals mimic motions of organs in higher animals due to evolutionarily conserved mechanisms. Hence, various neurological diseases can be linked to abnormal movement of body parts that are regulated by a malfunctioning CPG. In this paper, we, being inspired by recent experimental studies of neuronal activity patterns recorded from a swimming motion CPG of the sea slug Melibe leonina, examine a mathematical model of a 4-cell network that can plausibly and stably underlie the observed bursting rhythm. We develop a dynamical systems framework for explaining the existence and robustness of phase-locked states in activity patterns produced by the modeled CPGs. The proposed tools can be used for identifying core components for other CPG networks with reliable bursting outcomes and specific phase relationships between the interneurons. Our findings can be employed for identifying or implementing the conditions for normal and pathological functioning of basic CPGs of animals and artificially intelligent prosthetics that can regulate various movements.

  10. Next Generation Drivetrain Development and Test Program

    SciTech Connect

    Keller, Jonathan; Erdman, Bill; Blodgett, Doug; Halse, Chris; Grider, Dave

    2015-11-03

    This presentation was given at the Wind Energy IQ conference in Bremen, Germany, November 30 through December 2, 2105. It focused on the next-generation drivetrain architecture and drivetrain technology development and testing (including gearbox and inverter software and medium-voltage inverter modules.

  11. Pattern generation with cesium atomic beams at nanometer scales

    NASA Astrophysics Data System (ADS)

    Kreis, M.; Lison, F.; Haubrich, D.; Meschede, D.; Nowak, S.; Pfau, T.; Mlynek, J.

    1996-12-01

    We have demonstrated that a cesium atomic beam can be used to pattern a gold surface using a self assembling monolayer (SAM) as a resist. A 12.5 μm period mesh was used as a proximity mask for the atomic beam. The cesium atoms locally change the wetability of the SAM, which allows a wet etching reagent to remove the underlying gold in the exposed regions. An edge resolution of better than 100 nm was obtained. The experiment suggests that this method can either be used as a sensitive position detector with nanometer resolution in atom optics, or for nanostructuring in a resist technique.

  12. GENERATING FRACTAL PATTERNS BY USING p-CIRCLE INVERSION

    NASA Astrophysics Data System (ADS)

    Ramírez, José L.; Rubiano, Gustavo N.; Zlobec, Borut Jurčič

    2015-10-01

    In this paper, we introduce the p-circle inversion which generalizes the classical inversion with respect to a circle (p = 2) and the taxicab inversion (p = 1). We study some basic properties and we also show the inversive images of some basic curves. We apply this new transformation to well-known fractals such as Sierpinski triangle, Koch curve, dragon curve, Fibonacci fractal, among others. Then we obtain new fractal patterns. Moreover, we generalize the method called circle inversion fractal be means of the p-circle inversion.

  13. Development of W-Ta generator

    NASA Technical Reports Server (NTRS)

    1981-01-01

    This research program was used to further develop the existing W-Ta generator and to evaluate alternative adsorbents, preferably inorganic materials, as supports for the generator. During the first half year, combinations of non-complexing eluents and a variety of adsorbents, both inorganic and organic, were evaluated. Some of these adsorbents were synthetic, such as chelate resins that could be specific for tungsten. In the second half of the year, the stress was mainly on the use of complexing eluents because of the high affinity of hydrous oxides for tantalum, on the synthesis of chelate resins and on the use novel techniques (electrolytic) to solve the tantalum-adsorption problem.

  14. Development of a nitrogen generation system

    NASA Technical Reports Server (NTRS)

    Heppner, D. B.; Marshall, R. D.; Powell, J. D., III; Schubert, F. H.

    1980-01-01

    An eight-stage nitrogen generation module was developed. The design integrated a hydrazine catalytic dissociator, three ammonia dissociation stages and four palladium/silver hydrogen separator stages. Alternating ammonia dissociation and hydrogen separation stages are used to remove hydrogen and ammonia formed in the dissociation of hydrazine which results in negligible ammonia and hydrogen concentrations in the product nitrogen stream. An engineering breadboard nitrogen supply subsystem was also developed. It was developed as an integratable subsystem for a central spacecraft air revitalization system. The subsystem consists of the hydrazine storage and feed mechanism, the nitrogen generation module, the peripheral mechanical and electrical components required to control and monitor subsystem performance, and the instrumentation required to interface with other subsystems of an air revitalization system. The breadboard nitrogen supply subsystem was integrated and tested with a one-person capacity experimental air revitalization system. The integration, checkout and testing was successfully accomplished.

  15. The internal flow pattern analysis of a tidal power turbine operating on bidirectional generation-pumping

    NASA Astrophysics Data System (ADS)

    Y Luo, Y.; Xiao, Y. X.; Wang, Z. W.

    2013-12-01

    Using tidal energy can reduce environment pollution, save conventional energy and improve energy structure, hence it presents great advantage and is developing potential. Influenced by flood tide and low tide, a fully functional tidal power station needs to experience six operating modes, including bidirectional generation, pumping and sluice; the internal unsteady flow pattern and dynamic characters are very complicated. Based on a bidirectional tidal generator unit, three-dimensional unsteady flows in the flow path were calculated for four typical operating conditions with the pressure pulsation characteristics analyzed. According to the numerical results, the internal flow characteristics in the flow path were discussed. The influence of gravity to the hydraulic performance and flow characteristics were analysed. The results provide a theoretical analysis method of the hydraulic optimization design of the same type unit as well as a direction for stable operation and optimal scheduling of existing tidal power unit.

  16. Comparison of the reliability of multifocal visual evoked cortical potentials generated by pattern reversal and pattern pulse stimulation.

    PubMed

    Souza, G S; Schakelford, H B; Moura, A L A; Gomes, B D; Ventura, D F; Fitzgerald, M E C; Silveira, L C L

    2012-10-01

    This study compared the effectiveness of the multifocal visual evoked cortical potentials (mfVEP) elicited by pattern pulse stimulation with that of pattern reversal in producing reliable responses (signal-to-noise ratio >1.359). Participants were 14 healthy subjects. Visual stimulation was obtained using a 60-sector dartboard display consisting of 6 concentric rings presented in either pulse or reversal mode. Each sector, consisting of 16 checks at 99% Michelson contrast and 80 cd/m² mean luminance, was controlled by a binary m-sequence in the time domain. The signal-to-noise ratio was generally larger in the pattern reversal than in the pattern pulse mode. The number of reliable responses was similar in the central sectors for the two stimulation modes. At the periphery, pattern reversal showed a larger number of reliable responses. Pattern pulse stimuli performed similarly to pattern reversal stimuli to generate reliable waveforms in R1 and R2. The advantage of using both protocols to study mfVEP responses is their complementarity: in some patients, reliable waveforms in specific sectors may be obtained with only one of the two methods. The joint analysis of pattern reversal and pattern pulse stimuli increased the rate of reliability for central sectors by 7.14% in R1, 5.35% in R2, 4.76% in R3, 3.57% in R4, 2.97% in R5, and 1.78% in R6. From R1 to R4 the reliability to generate mfVEPs was above 70% when using both protocols. Thus, for a very high reliability and thorough examination of visual performance, it is recommended to use both stimulation protocols. PMID:22782556

  17. TermGenie – a web-application for pattern-based ontology class generation

    SciTech Connect

    Dietze, Heiko; Berardini, Tanya Z.; Foulger, Rebecca E.; Hill, David P.; Lomax, Jane; Osumi-Sutherland, David; Roncaglia, Paola; Mungall, Christopher J.

    2014-01-01

    Biological ontologies are continually growing and improving from requests for new classes (terms) by biocurators. These ontology requests can frequently create bottlenecks in the biocuration process, as ontology developers struggle to keep up, while manually processing these requests and create classes. TermGenie allows biocurators to generate new classes based on formally specified design patterns or templates. The system is web-based and can be accessed by any authorized curator through a web browser. Automated rules and reasoning engines are used to ensure validity, uniqueness and relationship to pre-existing classes. In the last 4 years the Gene Ontology TermGenie generated 4715 new classes, about 51.4% of all new classes created. The immediate generation of permanent identifiers proved not to be an issue with only 70 (1.4%) obsoleted classes. Lastly, TermGenie is a web-based class-generation system that complements traditional ontology development tools. All classes added through pre-defined templates are guaranteed to have OWL equivalence axioms that are used for automatic classification and in some cases inter-ontology linkage. At the same time, the system is simple and intuitive and can be used by most biocurators without extensive training.

  18. TermGenie – a web-application for pattern-based ontology class generation

    DOE PAGESBeta

    Dietze, Heiko; Berardini, Tanya Z.; Foulger, Rebecca E.; Hill, David P.; Lomax, Jane; Osumi-Sutherland, David; Roncaglia, Paola; Mungall, Christopher J.

    2014-01-01

    Biological ontologies are continually growing and improving from requests for new classes (terms) by biocurators. These ontology requests can frequently create bottlenecks in the biocuration process, as ontology developers struggle to keep up, while manually processing these requests and create classes. TermGenie allows biocurators to generate new classes based on formally specified design patterns or templates. The system is web-based and can be accessed by any authorized curator through a web browser. Automated rules and reasoning engines are used to ensure validity, uniqueness and relationship to pre-existing classes. In the last 4 years the Gene Ontology TermGenie generated 4715 newmore » classes, about 51.4% of all new classes created. The immediate generation of permanent identifiers proved not to be an issue with only 70 (1.4%) obsoleted classes. Lastly, TermGenie is a web-based class-generation system that complements traditional ontology development tools. All classes added through pre-defined templates are guaranteed to have OWL equivalence axioms that are used for automatic classification and in some cases inter-ontology linkage. At the same time, the system is simple and intuitive and can be used by most biocurators without extensive training.« less

  19. Computer-Assisted Generation of Patterns and Virtual Reality Techniques for Fashion Design

    NASA Astrophysics Data System (ADS)

    Naud, Mickael; Richard, Paul; Chapeau-Blondeau, François

    2009-03-01

    We present a methodology for the design of aesthetic patterns and their visualization on virtual clothes. Generated patterns are directly mapped on the dress of a virtual mannequin. Furthermore, patterns sets may be interactively mapped on the virtual dress using a specific 3D interaction technique called Back-and-Forth. Pattern generation involves different mathematical approaches such as iterated function systems (IFS) and nonlinear trajectory models. Both model parameters and color space exploration is performed through a simple user interface. This work contributes to promote both computer assistance in the context of mass customization for fashion design.

  20. Topology-generating interfacial pattern formation during liquid metal dealloying

    PubMed Central

    Geslin, Pierre-Antoine; McCue, Ian; Gaskey, Bernard; Erlebacher, Jonah; Karma, Alain

    2015-01-01

    Liquid metal dealloying has emerged as a novel technique to produce topologically complex nanoporous and nanocomposite structures with ultra-high interfacial area and other unique properties relevant for diverse material applications. This process is empirically known to require the selective dissolution of one element of a multicomponent solid alloy into a liquid metal to obtain desirable structures. However, how structures form is not known. Here we demonstrate, using mesoscale phase-field modelling and experiments, that nano/microstructural pattern formation during dealloying results from the interplay of (i) interfacial spinodal decomposition, forming compositional domain structures enriched in the immiscible element, and (ii) diffusion-coupled growth of the enriched solid phase and the liquid phase into the alloy. We highlight how those two basic mechanisms interact to yield a rich variety of topologically disconnected and connected structures. Moreover, we deduce scaling laws governing microstructural length scales and dealloying kinetics. PMID:26582248

  1. Topology-generating interfacial pattern formation during liquid metal dealloying.

    PubMed

    Geslin, Pierre-Antoine; McCue, Ian; Gaskey, Bernard; Erlebacher, Jonah; Karma, Alain

    2015-01-01

    Liquid metal dealloying has emerged as a novel technique to produce topologically complex nanoporous and nanocomposite structures with ultra-high interfacial area and other unique properties relevant for diverse material applications. This process is empirically known to require the selective dissolution of one element of a multicomponent solid alloy into a liquid metal to obtain desirable structures. However, how structures form is not known. Here we demonstrate, using mesoscale phase-field modelling and experiments, that nano/microstructural pattern formation during dealloying results from the interplay of (i) interfacial spinodal decomposition, forming compositional domain structures enriched in the immiscible element, and (ii) diffusion-coupled growth of the enriched solid phase and the liquid phase into the alloy. We highlight how those two basic mechanisms interact to yield a rich variety of topologically disconnected and connected structures. Moreover, we deduce scaling laws governing microstructural length scales and dealloying kinetics. PMID:26582248

  2. Topology-generating interfacial pattern formation during liquid metal dealloying

    NASA Astrophysics Data System (ADS)

    Geslin, Pierre-Antoine; McCue, Ian; Gaskey, Bernard; Erlebacher, Jonah; Karma, Alain

    2015-11-01

    Liquid metal dealloying has emerged as a novel technique to produce topologically complex nanoporous and nanocomposite structures with ultra-high interfacial area and other unique properties relevant for diverse material applications. This process is empirically known to require the selective dissolution of one element of a multicomponent solid alloy into a liquid metal to obtain desirable structures. However, how structures form is not known. Here we demonstrate, using mesoscale phase-field modelling and experiments, that nano/microstructural pattern formation during dealloying results from the interplay of (i) interfacial spinodal decomposition, forming compositional domain structures enriched in the immiscible element, and (ii) diffusion-coupled growth of the enriched solid phase and the liquid phase into the alloy. We highlight how those two basic mechanisms interact to yield a rich variety of topologically disconnected and connected structures. Moreover, we deduce scaling laws governing microstructural length scales and dealloying kinetics.

  3. Topology-generating interfacial pattern formation during liquid metal dealloying

    DOE PAGESBeta

    Geslin, Pierre -Antoine; McCue, Ian; Gaskey, Bernard; Erlebacher, Jonah; Karma, Alain

    2015-11-19

    Liquid metal dealloying has emerged as a novel technique to produce topologically complex nanoporous and nanocomposite structures with ultra-high interfacial area and other unique properties relevant for diverse material applications. This process is empirically known to require the selective dissolution of one element of a multicomponent solid alloy into a liquid metal to obtain desirable structures. However, how structures form is not known. Here we demonstrate, using mesoscale phase-field modelling and experiments, that nano/microstructural pattern formation during dealloying results from the interplay of (i) interfacial spinodal decomposition, forming compositional domain structures enriched in the immiscible element, and (ii) diffusion-coupled growthmore » of the enriched solid phase and the liquid phase into the alloy. We highlight how those two basic mechanisms interact to yield a rich variety of topologically disconnected and connected structures. Furthermore, we deduce scaling laws governing microstructural length scales and dealloying kinetics.« less

  4. Topology-generating interfacial pattern formation during liquid metal dealloying

    SciTech Connect

    Geslin, Pierre -Antoine; McCue, Ian; Gaskey, Bernard; Erlebacher, Jonah; Karma, Alain

    2015-11-19

    Liquid metal dealloying has emerged as a novel technique to produce topologically complex nanoporous and nanocomposite structures with ultra-high interfacial area and other unique properties relevant for diverse material applications. This process is empirically known to require the selective dissolution of one element of a multicomponent solid alloy into a liquid metal to obtain desirable structures. However, how structures form is not known. Here we demonstrate, using mesoscale phase-field modelling and experiments, that nano/microstructural pattern formation during dealloying results from the interplay of (i) interfacial spinodal decomposition, forming compositional domain structures enriched in the immiscible element, and (ii) diffusion-coupled growth of the enriched solid phase and the liquid phase into the alloy. We highlight how those two basic mechanisms interact to yield a rich variety of topologically disconnected and connected structures. Furthermore, we deduce scaling laws governing microstructural length scales and dealloying kinetics.

  5. Circulation control lift generation experiment: Hardware development

    NASA Technical Reports Server (NTRS)

    Panontin, T. L.

    1985-01-01

    A circulation control airfoil and its accompanying hardware were developed to allow the investigation of lift generation that is independent of airfoil angle of attack and relative flow velocity. The test equipment, designed for use in a water tunnel, includes the blown airfoil, the support systems for both flow visualization and airfoil load measurement, and the fluid control system, which utilizes hydraulic technology. The primary design tasks, the selected solutions, and the unforseen problems involved in the development of these individual components of hardware are described.

  6. Generation of nearly hemispherical and high gain azimuthally symmetric patterns with printed circuit antennas

    NASA Astrophysics Data System (ADS)

    Yang, Hung Yu; Alexopoulos, Nicolaos G.

    1987-08-01

    Patttern shaping techniques are discussed for printed circuit antennas such as microstrip dipoles and slot elements. Crossed printed circuit dipoles or a combination of a printed circuit dipole and a slot are employed. It is demonstrated that with the proper choice of substrate or substrate-superstrate parameters it is possible to generate: (1) nearly hemispherical patterns, (2) high-gain azimuthally symmetric patterns, and (3) nearly sec theta patterns.

  7. Arabidopsis nucleolin affects plant development and patterning.

    PubMed

    Petricka, Jalean Joyanne; Nelson, Timothy Mark

    2007-05-01

    Nucleolin is a major nucleolar protein implicated in many aspects of ribosomal biogenesis, including early events such as processing of the large 35S preribosomal RNA. We found that the Arabidopsis (Arabidopsis thaliana) parallel1 (parl1) mutant, originally identified by its aberrant leaf venation, corresponds to the Arabidopsis nucleolin gene. parl1 mutants display parallel leaf venation, aberrant localization of the provascular marker Athb8:beta-glucuronidase, the auxin-sensitive reporter DR5:beta-glucuronidase, and auxin-dependent growth defects. PARL1 is highly similar to the yeast (Saccharomyces cerevisiae) nucleolin NUCLEAR SIGNAL RECOGNITION 1 (NSR1) multifunctional protein; the Arabidopsis PARL1 gene can rescue growth defects of yeast nsr1 null mutants. This suggests that PARL1 protein may have roles similar to those of the yeast nucleolin in nuclear signal recognition, ribosomal processing, and ribosomal subunit accumulation. Based on the range of auxin-related defects in parl1 mutants, we propose that auxin-dependent organ growth and patterning is highly sensitive to the efficiency of nucleolin-dependent ribosomal processing. PMID:17369435

  8. Generation of Customizable Micro-wavy Pattern through Grayscale Direct Image Lithography

    PubMed Central

    He, Ran; Wang, Shunqiang; Andrews, Geoffrey; Shi, Wentao; Liu, Yaling

    2016-01-01

    With the increasing amount of research work in surface studies, a more effective method of producing patterned microstructures is highly desired due to the geometric limitations and complex fabricating process of current techniques. This paper presents an efficient and cost-effective method to generate customizable micro-wavy pattern using direct image lithography. This method utilizes a grayscale Gaussian distribution effect to model inaccuracies inherent in the polymerization process, which are normally regarded as trivial matters or errors. The measured surface profiles and the mathematical prediction show a good agreement, demonstrating the ability of this method to generate wavy patterns with precisely controlled features. An accurate pattern can be generated with customizable parameters (wavelength, amplitude, wave shape, pattern profile, and overall dimension). This mask-free photolithography approach provides a rapid fabrication method that is capable of generating complex and non-uniform 3D wavy patterns with the wavelength ranging from 12 μm to 2100 μm and an amplitude-to-wavelength ratio as large as 300%. Microfluidic devices with pure wavy and wavy-herringbone patterns suitable for capture of circulating tumor cells are made as a demonstrative application. A completely customized microfluidic device with wavy patterns can be created within a few hours without access to clean room or commercial photolithography equipment. PMID:26902520

  9. Central Pattern Generation and the Motor Infrastructure for Suck, Respiration, and Speech

    ERIC Educational Resources Information Center

    Barlow, Steven M.; Estep, Meredith

    2006-01-01

    The objective of the current report is to review experimental findings on centrally patterned movements and sensory and descending modulation of central pattern generators (CPGs) in a variety of animal and human models. Special emphasis is directed toward speech production muscle systems, including the chest wall and orofacial complex during…

  10. Generation of Customizable Micro-wavy Pattern through Grayscale Direct Image Lithography

    NASA Astrophysics Data System (ADS)

    He, Ran; Wang, Shunqiang; Andrews, Geoffrey; Shi, Wentao; Liu, Yaling

    2016-02-01

    With the increasing amount of research work in surface studies, a more effective method of producing patterned microstructures is highly desired due to the geometric limitations and complex fabricating process of current techniques. This paper presents an efficient and cost-effective method to generate customizable micro-wavy pattern using direct image lithography. This method utilizes a grayscale Gaussian distribution effect to model inaccuracies inherent in the polymerization process, which are normally regarded as trivial matters or errors. The measured surface profiles and the mathematical prediction show a good agreement, demonstrating the ability of this method to generate wavy patterns with precisely controlled features. An accurate pattern can be generated with customizable parameters (wavelength, amplitude, wave shape, pattern profile, and overall dimension). This mask-free photolithography approach provides a rapid fabrication method that is capable of generating complex and non-uniform 3D wavy patterns with the wavelength ranging from 12 μm to 2100 μm and an amplitude-to-wavelength ratio as large as 300%. Microfluidic devices with pure wavy and wavy-herringbone patterns suitable for capture of circulating tumor cells are made as a demonstrative application. A completely customized microfluidic device with wavy patterns can be created within a few hours without access to clean room or commercial photolithography equipment.

  11. A new Pulse-Pattern Generator based on LabVIEW FPGA

    NASA Astrophysics Data System (ADS)

    Ziegler, F.; Beck, D.; Brand, H.; Hahn, H.; Marx, G.; Schweikhard, L.

    2012-07-01

    For the control of experimental sequences composed of triggers, gates and delays a Pulse-Pattern Generator (PPG) has been developed based on a Field Programmable Gate Array (FPGA) addressed in a LabVIEW environment. It allows a highly reproducible timing of measurement procedures by up to 64 individual channels with pulse and delay periods from the nanoseconds to the minutes range. The PPG has been implemented in the context of the development of a new control system for the ClusterTrap setup, an ion storage device for atomic-cluster research, in close contact with the SHIPTRAP and ISOLTRAP collaborations at GSI and CERN, respectively. As the new PPG is not ion-trap specific it can be employed in any experiment based on sequences of triggers, pulses and delays.

  12. An Experimental and Theoretical Study of Fracture Patterns Generated by Underground Explosions

    NASA Astrophysics Data System (ADS)

    Bhat, H.; Mihaly, J. M.; Rosakis, A.; Sammis, C. G.

    2012-12-01

    A dynamic micro-mechanical damage mechanics model, developed by Bhat, Rosakis and Sammis, J. Appl. Mech., 2012, is used to simulate two-dimensional explosions in a brittle material. The theoretical patterns of circumferential and radial fractures are quantitatively compared with those produced by point explosions in very brittle "candy glass" plates. In these experiments the evolution of the fracture pattern is monitored using high-speed digital photography, which also images the resultant elastic waves (P and S). Theoretical estimates of the spatial extent of circumferential and radial cracking as well as the propagation speed of the comminution front and the growth-rate of individual radial cracks all compare well with the experimental observations. The wave-forms of the P and S waves, specifically the local particle velocities, are also recorded at selected points using laser vibrometers. Asymmetric fracture patterns caused by a non isotropic pre-stress, the preferred orientation of initial flaws (a rift plane), or a lithostatic gradient lead to the generation of strong S-waves from the otherwise spherically symmetric point source.

  13. Sonic hedgehog patterning during cerebellar development.

    PubMed

    De Luca, Annarita; Cerrato, Valentina; Fucà, Elisa; Parmigiani, Elena; Buffo, Annalisa; Leto, Ketty

    2016-01-01

    The morphogenic factor sonic hedgehog (Shh) actively orchestrates many aspects of cerebellar development and maturation. During embryogenesis, Shh signaling is active in the ventricular germinal zone (VZ) and represents an essential signal for proliferation of VZ-derived progenitors. Later, Shh secreted by Purkinje cells sustains the amplification of postnatal neurogenic niches: the external granular layer and the prospective white matter, where excitatory granule cells and inhibitory interneurons are produced, respectively. Moreover, Shh signaling affects Bergmann glial differentiation and promotes cerebellar foliation during development. Here we review the most relevant functions of Shh during cerebellar ontogenesis, underlying its role in physiological and pathological conditions. PMID:26499980

  14. Pakistan's pattern of development and prospects.

    PubMed

    Baqui, M

    1979-01-01

    This paper analyzes past and present development experiences in Pakistan, and gives indications of possible directions for future development. Since 1969 there has been an open dissatisfaction with economic management from the government, which has resulted in a drying up of private investment. However, this drawback was partly balanced by a rapid increase in income received by Pakistanis working abroad, particularly in the Middle East. There have been slight increases in growth in agriculture, industry, and in the service sector, such as banking, insurance, and shipping. The growth of per capita income, however, is constantly offset by the acceleration in population growth, which has reached 3% a year. Literacy rate is still 19% of the total population, and basic health facilities cover only 50% of the population, while potable water supply is available to 11.2% of the rural population. Possible development directions would include the denationalization of some industries, and the creation of competition between the private and public sectors, so to improve the climate for private investment. Water availability for land irrigation should be expanded, and mineral fields better surveyed and exploited. Pakistan should develop the possibility of growing trade offered by its geographical location, improve all kinds of social services, including family planning, education, and health services, and provide the means to produce energy for all the prospected programs. PMID:12261814

  15. Longitudinal Attendance Patterns: Developing High School Dropouts

    ERIC Educational Resources Information Center

    Schoeneberger, Jason A.

    2012-01-01

    The elementary and middle grades are a time of great developmental changes with the potential to impact children's longer-term growth. As students progress through their formal schooling during these time periods, the potential exists for children either to follow a course of healthy development associated with positive outcomes or to experience…

  16. SNAP-8 electrical generating system development program

    NASA Technical Reports Server (NTRS)

    1971-01-01

    The SNAP-8 program has developed the technology base for one class of multikilowatt dynamic space power systems. Electrical power is generated by a turbine-alternator in a mercury Rankine-cycle loop to which heat is transferred and removed by means of sodium-potassium eutectic alloy subsystems. Final system overall criteria include a five-year operating life, restartability, man rating, and deliverable power in the 90 kWe range. The basic technology was demonstrated by more than 400,000 hours of major component endurance testing and numerous startup and shutdown cycles. A test system, comprised of developed components, delivered up to 35 kWe for a period exceeding 12,000 hours. The SNAP-8 system baseline is considered to have achieved a level of technology suitable for final application development for long-term multikilowatt space missions.

  17. Future development of large superconducting generators

    SciTech Connect

    Singh, S.K.; Mole, C.J.

    1989-03-01

    Large superconducting generators are being developed worldwide. The use of superconductors to reduce the electrical power dissipation in power equipment has been a technological possibility ever since the discovery of superconductivity, even though their use in power equipment remained an impractical dream for a long time. However, scientific and technological progress in superconductivity and cryogenics has brought this dream much closer to reality. Results obtained so far establish the technical feasibility of these machines. Analytical developments have been providing a sound basis for the design of superconducting machines and results of these design studies have shown improvements in power density of up to a factor of 10 higher than the power density for conventional machines. This paper describes the recently completed USA programs, the current foreign and USA programs, and then proposes a USA development program to maintain leadership in the field.

  18. Mechanisms of Left-Right Coordination in Mammalian Locomotor Pattern Generation Circuits: A Mathematical Modeling View

    PubMed Central

    Talpalar, Adolfo E.; Rybak, Ilya A.

    2015-01-01

    The locomotor gait in limbed animals is defined by the left-right leg coordination and locomotor speed. Coordination between left and right neural activities in the spinal cord controlling left and right legs is provided by commissural interneurons (CINs). Several CIN types have been genetically identified, including the excitatory V3 and excitatory and inhibitory V0 types. Recent studies demonstrated that genetic elimination of all V0 CINs caused switching from a normal left-right alternating activity to a left-right synchronized “hopping” pattern. Furthermore, ablation of only the inhibitory V0 CINs (V0D subtype) resulted in a lack of left-right alternation at low locomotor frequencies and retaining this alternation at high frequencies, whereas selective ablation of the excitatory V0 neurons (V0V subtype) maintained the left–right alternation at low frequencies and switched to a hopping pattern at high frequencies. To analyze these findings, we developed a simplified mathematical model of neural circuits consisting of four pacemaker neurons representing left and right, flexor and extensor rhythm-generating centers interacting via commissural pathways representing V3, V0D, and V0V CINs. The locomotor frequency was controlled by a parameter defining the excitation of neurons and commissural pathways mimicking the effects of N-methyl-D-aspartate on locomotor frequency in isolated rodent spinal cord preparations. The model demonstrated a typical left-right alternating pattern under control conditions, switching to a hopping activity at any frequency after removing both V0 connections, a synchronized pattern at low frequencies with alternation at high frequencies after removing only V0D connections, and an alternating pattern at low frequencies with hopping at high frequencies after removing only V0V connections. We used bifurcation theory and fast-slow decomposition methods to analyze network behavior in the above regimes and transitions between them. The model

  19. Mechanisms of left-right coordination in mammalian locomotor pattern generation circuits: a mathematical modeling view.

    PubMed

    Molkov, Yaroslav I; Bacak, Bartholomew J; Talpalar, Adolfo E; Rybak, Ilya A

    2015-05-01

    The locomotor gait in limbed animals is defined by the left-right leg coordination and locomotor speed. Coordination between left and right neural activities in the spinal cord controlling left and right legs is provided by commissural interneurons (CINs). Several CIN types have been genetically identified, including the excitatory V3 and excitatory and inhibitory V0 types. Recent studies demonstrated that genetic elimination of all V0 CINs caused switching from a normal left-right alternating activity to a left-right synchronized "hopping" pattern. Furthermore, ablation of only the inhibitory V0 CINs (V0D subtype) resulted in a lack of left-right alternation at low locomotor frequencies and retaining this alternation at high frequencies, whereas selective ablation of the excitatory V0 neurons (V0V subtype) maintained the left-right alternation at low frequencies and switched to a hopping pattern at high frequencies. To analyze these findings, we developed a simplified mathematical model of neural circuits consisting of four pacemaker neurons representing left and right, flexor and extensor rhythm-generating centers interacting via commissural pathways representing V3, V0D, and V0V CINs. The locomotor frequency was controlled by a parameter defining the excitation of neurons and commissural pathways mimicking the effects of N-methyl-D-aspartate on locomotor frequency in isolated rodent spinal cord preparations. The model demonstrated a typical left-right alternating pattern under control conditions, switching to a hopping activity at any frequency after removing both V0 connections, a synchronized pattern at low frequencies with alternation at high frequencies after removing only V0D connections, and an alternating pattern at low frequencies with hopping at high frequencies after removing only V0V connections. We used bifurcation theory and fast-slow decomposition methods to analyze network behavior in the above regimes and transitions between them. The model

  20. Revisit Pattern Blocks to Develop Rational Number Sense

    ERIC Educational Resources Information Center

    Champion, Joe; Wheeler, Ann

    2014-01-01

    Pattern blocks are inexpensive wooden, foam, or plastic manipulatives developed in the 1960s to help students build an understanding of shapes, proportions, equivalence, and fractions (EDC 1968). The colorful collection of basic shapes in classic pattern block kits affords opportunities for amazing puzzle-like problem-solving tasks and for…

  1. Research Issues in Evaluating Learning Pattern Development in Higher Education

    ERIC Educational Resources Information Center

    Richardson, John T. E.

    2013-01-01

    This article concludes the special issue of "Studies in Educational Evaluation" concerned with "Evaluating learning pattern development in higher education" by discussing research issues that have emerged from the previous contributions. The article considers in turn: stability versus variability in learning patterns; old versus new analytic…

  2. Effects of Differences in Working Memory Capacity on Patterns of Word Generation

    ERIC Educational Resources Information Center

    Kawamura, Mimpei; Kobayashi, Yasutaka; Morioka, Shu

    2012-01-01

    In recent years, it has been reported that WM (working memory) is concerned with word generation, but many points regarding the relationship between the individual differences of WM capacity and the patterns of word generation remain unclear. This study is to investigate these unclear points by using three types of word fluency task with different…

  3. Alcohol Consumption Patterns in Immigrant and Later Generation Mexican American Women.

    ERIC Educational Resources Information Center

    Gilbert, M. Jean

    1987-01-01

    Immigrant Mexican women's drinking patterns were compared with those of Mexican women in Mexico, other United States Latinas, later-generation Mexican-American women, and male immigrants. Changes in the direction of greater permissiveness and rationalization of alcohol use among later-generation Mexican-American women are demonstrated. (JMM)

  4. Development of a downhole steam generator system

    SciTech Connect

    Not Available

    1984-04-01

    This report describes the development of a downhole steam generator system for use in enhanced oil recovery. The system is composed of four major components: A state-of-the-art review indicated that advances in technology would be necessary in two areas (high pressure combustion and high temperature packer seals) in order to fabricate a field-worthy system. As a result, two tasks were undertaken which resulted in the development of a novel ceramic-lined combustor and a unique all-metal packer. These elements were incorporated into an overall system design. Key system components were built and tested in the laboratory. The program culminated in a successful simulated downhole test of the entire system, less tube string, at Sandia National Laboratories. 5 references, 41 figures, 9 tables.

  5. A model of a flexible anguilliform swimmer driven by a central pattern generator with proprioceptive feedback

    NASA Astrophysics Data System (ADS)

    Hamlet, Christina; Tytell, Eric; Hoffman, Kathleen; Fauci, Lisa

    2015-11-01

    The swimming of a simple vertebrate, the lamprey, can shed light on how a flexible body can couple with a fluid environment to swim rapidly and efficiently. Animals use proprioceptive sensory information to sense how their bodies are bending, and then adjust the neural signals to their muscles to improve performance. We will present recent progress in the development of a computational model of a lamprey swimming in a Navier-Stokes fluid where a simple central pattern generator model, based on phase oscillators, is coupled to the evolving body dynamics of the swimmer through curvature and curvature derivative feedback. Such feedback can be positive (frequency decreasing), negative (frequency increasing), or mixed (positive to one side of the body and negative to the other, or vice versa). We will examine how the emergent swimming behavior and cost of transport depends upon these functional forms of proprioceptive feedback chosen in the model.

  6. Pigment cell movement is not required for generation of Turing patterns in zebrafish skin

    NASA Astrophysics Data System (ADS)

    Bullara, D.; de Decker, Y.

    2015-05-01

    The zebrafish is a model organism for pattern formation in vertebrates. Understanding what drives the formation of its coloured skin motifs could reveal pivotal to comprehend the mechanisms behind morphogenesis. The motifs look and behave like reaction-diffusion Turing patterns, but the nature of the underlying physico-chemical processes is very different, and the origin of the patterns is still unclear. Here we propose a minimal model for such pattern formation based on a regulatory mechanism deduced from experimental observations. This model is able to produce patterns with intrinsic wavelength, closely resembling the experimental ones. We mathematically prove that their origin is a Turing bifurcation occurring despite the absence of cell motion, through an effect that we call differential growth. This mechanism is qualitatively different from the reaction-diffusion originally proposed by Turing, although they both generate the short-range activation and the long-range inhibition required to form Turing patterns.

  7. Pigment cell movement is not required for generation of Turing patterns in zebrafish skin

    PubMed Central

    Bullara, D.; De Decker, Y.

    2015-01-01

    The zebrafish is a model organism for pattern formation in vertebrates. Understanding what drives the formation of its coloured skin motifs could reveal pivotal to comprehend the mechanisms behind morphogenesis. The motifs look and behave like reaction–diffusion Turing patterns, but the nature of the underlying physico-chemical processes is very different, and the origin of the patterns is still unclear. Here we propose a minimal model for such pattern formation based on a regulatory mechanism deduced from experimental observations. This model is able to produce patterns with intrinsic wavelength, closely resembling the experimental ones. We mathematically prove that their origin is a Turing bifurcation occurring despite the absence of cell motion, through an effect that we call differential growth. This mechanism is qualitatively different from the reaction–diffusion originally proposed by Turing, although they both generate the short-range activation and the long-range inhibition required to form Turing patterns. PMID:25959141

  8. The "Chaos" Pattern in Piaget's Theory of Cognitive Development.

    ERIC Educational Resources Information Center

    Lindsay, Jean S.

    Piaget's theory of the cognitive development of the child is related to the recently developed non-linear "chaos" model. The term "chaos" refers to the tendency of dynamical, non-linear systems toward irregular, sometimes unpredictable, deterministic behavior. Piaget identified this same pattern in his model of cognitive development in children.…

  9. Localization of Motor Neurons and Central Pattern Generators for Motor Patterns Underlying Feeding Behavior in Drosophila Larvae.

    PubMed

    Hückesfeld, Sebastian; Schoofs, Andreas; Schlegel, Philipp; Miroschnikow, Anton; Pankratz, Michael J

    2015-01-01

    Motor systems can be functionally organized into effector organs (muscles and glands), the motor neurons, central pattern generators (CPG) and higher control centers of the brain. Using genetic and electrophysiological methods, we have begun to deconstruct the motor system driving Drosophila larval feeding behavior into its component parts. In this paper, we identify distinct clusters of motor neurons that execute head tilting, mouth hook movements, and pharyngeal pumping during larval feeding. This basic anatomical scaffold enabled the use of calcium-imaging to monitor the neural activity of motor neurons within the central nervous system (CNS) that drive food intake. Simultaneous nerve- and muscle-recordings demonstrate that the motor neurons innervate the cibarial dilator musculature (CDM) ipsi- and contra-laterally. By classical lesion experiments we localize a set of CPGs generating the neuronal pattern underlying feeding movements to the subesophageal zone (SEZ). Lesioning of higher brain centers decelerated all feeding-related motor patterns, whereas lesioning of ventral nerve cord (VNC) only affected the motor rhythm underlying pharyngeal pumping. These findings provide a basis for progressing upstream of the motor neurons to identify higher regulatory components of the feeding motor system. PMID:26252658

  10. Localization of Motor Neurons and Central Pattern Generators for Motor Patterns Underlying Feeding Behavior in Drosophila Larvae

    PubMed Central

    Hückesfeld, Sebastian; Schoofs, Andreas; Schlegel, Philipp; Miroschnikow, Anton; Pankratz, Michael J.

    2015-01-01

    Motor systems can be functionally organized into effector organs (muscles and glands), the motor neurons, central pattern generators (CPG) and higher control centers of the brain. Using genetic and electrophysiological methods, we have begun to deconstruct the motor system driving Drosophila larval feeding behavior into its component parts. In this paper, we identify distinct clusters of motor neurons that execute head tilting, mouth hook movements, and pharyngeal pumping during larval feeding. This basic anatomical scaffold enabled the use of calcium-imaging to monitor the neural activity of motor neurons within the central nervous system (CNS) that drive food intake. Simultaneous nerve- and muscle-recordings demonstrate that the motor neurons innervate the cibarial dilator musculature (CDM) ipsi- and contra-laterally. By classical lesion experiments we localize a set of CPGs generating the neuronal pattern underlying feeding movements to the subesophageal zone (SEZ). Lesioning of higher brain centers decelerated all feeding-related motor patterns, whereas lesioning of ventral nerve cord (VNC) only affected the motor rhythm underlying pharyngeal pumping. These findings provide a basis for progressing upstream of the motor neurons to identify higher regulatory components of the feeding motor system. PMID:26252658

  11. Fruit shape diversity in the Brassicaceae is generated by varying patterns of anisotropy.

    PubMed

    Eldridge, Tilly; Łangowski, Łukasz; Stacey, Nicola; Jantzen, Friederike; Moubayidin, Laila; Sicard, Adrien; Southam, Paul; Kennaway, Richard; Lenhard, Michael; Coen, Enrico S; Østergaard, Lars

    2016-09-15

    Fruits exhibit a vast array of different 3D shapes, from simple spheres and cylinders to more complex curved forms; however, the mechanism by which growth is oriented and coordinated to generate this diversity of forms is unclear. Here, we compare the growth patterns and orientations for two very different fruit shapes in the Brassicaceae: the heart-shaped Capsella rubella silicle and the near-cylindrical Arabidopsis thaliana silique. We show, through a combination of clonal and morphological analyses, that the different shapes involve different patterns of anisotropic growth during three phases. These experimental data can be accounted for by a tissue-level model in which specified growth rates vary in space and time and are oriented by a proximodistal polarity field. The resulting tissue conflicts lead to deformation of the tissue as it grows. The model allows us to identify tissue-specific and temporally specific activities required to obtain the individual shapes. One such activity may be provided by the valve-identity gene FRUITFULL, which we show through comparative mutant analysis to modulate fruit shape during post-fertilisation growth of both species. Simple modulations of the model presented here can also broadly account for the variety of shapes in other Brassicaceae species, thus providing a simplified framework for fruit development and shape diversity. PMID:27624834

  12. High-fidelity spherical cholesteric liquid crystal Bragg reflectors generating unclonable patterns for secure authentication

    PubMed Central

    Geng, Yong; Noh, JungHyun; Drevensek-Olenik, Irena; Rupp, Romano; Lenzini, Gabriele; Lagerwall, Jan P. F.

    2016-01-01

    Monodisperse cholesteric liquid crystal microspheres exhibit spherically symmetric Bragg reflection, generating, via photonic cross communication, dynamically tuneable multi-coloured patterns. These patterns, uniquely defined by the particular sphere arrangement, could render cholesteric microspheres very useful in countless security applications, as tags to identify and authenticate their carriers, mainly physical objects or persons. However, the optical quality of the cholesteric droplets studied so far is unsatisfactory, especially after polymerisation, a step required for obtaining durable samples that can be used for object identification. We show that a transition from droplets to shells solves all key problems, giving rise to sharp patterns and excellent optical quality even after polymerisation, the polymerised shells sustaining considerable mechanical deformation. Moreover, we demonstrate that, counter to prior expectation, cross communication takes place even between non-identical shells. This opens additional communication channels that add significantly to the complexity and unique character of the generated patterns. PMID:27230944

  13. High-fidelity spherical cholesteric liquid crystal Bragg reflectors generating unclonable patterns for secure authentication.

    PubMed

    Geng, Yong; Noh, JungHyun; Drevensek-Olenik, Irena; Rupp, Romano; Lenzini, Gabriele; Lagerwall, Jan P F

    2016-01-01

    Monodisperse cholesteric liquid crystal microspheres exhibit spherically symmetric Bragg reflection, generating, via photonic cross communication, dynamically tuneable multi-coloured patterns. These patterns, uniquely defined by the particular sphere arrangement, could render cholesteric microspheres very useful in countless security applications, as tags to identify and authenticate their carriers, mainly physical objects or persons. However, the optical quality of the cholesteric droplets studied so far is unsatisfactory, especially after polymerisation, a step required for obtaining durable samples that can be used for object identification. We show that a transition from droplets to shells solves all key problems, giving rise to sharp patterns and excellent optical quality even after polymerisation, the polymerised shells sustaining considerable mechanical deformation. Moreover, we demonstrate that, counter to prior expectation, cross communication takes place even between non-identical shells. This opens additional communication channels that add significantly to the complexity and unique character of the generated patterns. PMID:27230944

  14. High-fidelity spherical cholesteric liquid crystal Bragg reflectors generating unclonable patterns for secure authentication

    NASA Astrophysics Data System (ADS)

    Geng, Yong; Noh, Junghyun; Drevensek-Olenik, Irena; Rupp, Romano; Lenzini, Gabriele; Lagerwall, Jan P. F.

    2016-05-01

    Monodisperse cholesteric liquid crystal microspheres exhibit spherically symmetric Bragg reflection, generating, via photonic cross communication, dynamically tuneable multi-coloured patterns. These patterns, uniquely defined by the particular sphere arrangement, could render cholesteric microspheres very useful in countless security applications, as tags to identify and authenticate their carriers, mainly physical objects or persons. However, the optical quality of the cholesteric droplets studied so far is unsatisfactory, especially after polymerisation, a step required for obtaining durable samples that can be used for object identification. We show that a transition from droplets to shells solves all key problems, giving rise to sharp patterns and excellent optical quality even after polymerisation, the polymerised shells sustaining considerable mechanical deformation. Moreover, we demonstrate that, counter to prior expectation, cross communication takes place even between non-identical shells. This opens additional communication channels that add significantly to the complexity and unique character of the generated patterns.

  15. When does colonisation of a semi-arid hillslope generate vegetation patterns?

    PubMed

    Sherratt, Jonathan A

    2016-07-01

    Patterned vegetation occurs in many semi-arid regions of the world. Most previous studies have assumed that patterns form from a starting point of uniform vegetation, for example as a response to a decrease in mean annual rainfall. However an alternative possibility is that patterns are generated when bare ground is colonised. This paper investigates the conditions under which colonisation leads to patterning on sloping ground. The slope gradient plays an important role because of the downhill flow of rainwater. One long-established consequence of this is that patterns are organised into stripes running parallel to the contours; such patterns are known as banded vegetation or tiger bush. This paper shows that the slope also has an important effect on colonisation, since the uphill and downhill edges of an isolated vegetation patch have different dynamics. For the much-used Klausmeier model for semi-arid vegetation, the author shows that without a term representing water diffusion, colonisation always generates uniform vegetation rather than a pattern. However the combination of a sufficiently large water diffusion term and a sufficiently low slope gradient does lead to colonisation-induced patterning. The author goes on to consider colonisation in the Rietkerk model, which is also in widespread use: the same conclusions apply for this model provided that a small threshold is imposed on vegetation biomass, below which plant growth is set to zero. Since the two models are quite different mathematically, this suggests that the predictions are a consequence of the basic underlying assumption of water redistribution as the pattern generation mechanism. PMID:26547308

  16. Turing patterns in development: what about the horse part?

    PubMed

    Marcon, Luciano; Sharpe, James

    2012-12-01

    For many years Turing patterns-the repetitive patterns which Alan Turing proved could arise from simple diffusing and interacting factors-have remained an interesting theoretical possibility, rather than a central concern of the developmental biology community. Recently however, this has started to change, with an increasing number of studies combining both experimental and theoretical work to reveal how Turing models may underlie a variety of patterning or morphogenetic processes. We review here the recent developments in this field across a wide range of model systems. PMID:23276682

  17. Calculation of second-harmonic wave pattern generated by focused cylindrical vector beams

    NASA Astrophysics Data System (ADS)

    Ohtsu, A.; Kozawa, Y.; Sato, S.

    2010-03-01

    We calculated the second-harmonic wave pattern induced by focused cylindrically symmetric, polarized vector beams. The second-order nonlinear polarization was expressed for fundamental electric field components passed through a dielectric interface based on vector diffraction theory. Furthermore, the second-harmonic wave pattern was represented on the basis of the far-field approximate expression derived from the formulation of higher-order harmonic generation including a Green's function. For a (110) zinc selenide crystal, the calculated forward emission patterns of the second-harmonic wave were eight-figure shaped as observed in experiment.

  18. Next generation limb development and evolution: old questions, new perspectives.

    PubMed

    Zuniga, Aimée

    2015-11-15

    The molecular analysis of limb bud development in vertebrates continues to fuel our understanding of the gene regulatory networks that orchestrate the patterning, proliferation and differentiation of embryonic progenitor cells. In recent years, systems biology approaches have moved our understanding of the molecular control of limb organogenesis to the next level by incorporating next generation 'omics' approaches, analyses of chromatin architecture, enhancer-promoter interactions and gene network simulations based on quantitative datasets into experimental analyses. This Review focuses on the insights these studies have given into the gene regulatory networks that govern limb development and into the fin-to-limb transition and digit reductions that occurred during the evolutionary diversification of tetrapod limbs. PMID:26577204

  19. Oscillatory Pattern Generation of the Olfactory Center Using Pulse-Type Hardware Chaotic Neuron Models

    NASA Astrophysics Data System (ADS)

    Saito, Ken; Hatano, Hirokazu; Saito, Minoru; Sekine, Yoshifumi

    Oscillatory patterns of electrical activity are a ubiquitous feature in nervous systems. Oscillatory patterns play an important role in the processing of sensory information pattern recognition. For example, earlier reports describe that the oscillatory patterns in the olfactory center of the land slug are changed by odor stimuli to the tentacles. Olfactory processing has also been studied in relation to rabbits and land slugs through the construction and use of mathematical neural network models. However, a large-scale model is necessary for the study of a model which has sensory information recognition by the oscillatory pattern. Therefore, the construction of a hardware model that can generate oscillatory patterns is desired because nonlinear operations can be processed at higher speeds than the mathematical model. We are studying about the neural network using hardware neuron models to construct the olfactory center model of the living organisms. In the present study, we discuss about the oscillatory pattern generation of the olfactory center using pulse-type hardware chaotic neuron models. Our model shows periodic, quasi-periodic and chaotic oscillations such as the olfactory center of living organisms by changing the synaptic connection weights.

  20. Structural vibration control by tuned mass damper using central pattern generator

    NASA Astrophysics Data System (ADS)

    Iba, Daisuke; Hongu, Junichi

    2011-04-01

    This paper proposes a new control method for active mass dampers using a Central Pattern Generator in vibration mitigation. The active mass dampers (or active dynamic absorbers) have been applied to structural vibration control of high-rise buildings, bridges and so on. In this case, the mass of the active mass damper must oscillate in an appropriate phase in relation to the control object, and generally, the damper has been designed by linear control theory as pole placement method, optimal control method or H infinity control method, and all the rest. On the other hand, on walking of animate beings like mammals or insects, both side feet have appropriate phase relations; moreover, it is possible to keep moving on irregular ground. That is, algorithms for the walking would be embedded into the animate beings to control the complicated and redundant bodies with ease and robustness. In biological study, the Central Pattern Generators in bodies playing a significant role in the walking have been learned over the last few decades, and some studies said that some animate beings are able to control their feet by using the generators without their brains in the walking. Moreover, mathematical models of the pattern generators have been proposed, and some researchers have been studying to realize walking of biped-robots using the pattern generators embedded in a computer. In this study, the algorithm is installed into a controller for the active mass damper; furthermore, validation of the controller is performed by numerical simulation.

  1. Belly dancer's myoclonus and chronic abdominal pain: pain-related dysinhibition of a spinal cord central pattern generator?

    PubMed

    Tamburin, Stefano; Idone, Domenico; Zanette, Giampietro

    2007-07-01

    We report on a patient with segmental rhythmic myoclonus resembling belly dance. This patient developed the myoclonus in temporal and anatomical association with chronic abdominal pain. No structural or metabolic abnormalities were found. EMG recordings suggested the presence of a spinal cord central pattern generator (CPG). We hypothesize that pain-related spinal plasticity might have contributed to the hyperactivity of a spinal CPG, thus leading to the myoclonic jerks in our patient. PMID:17049297

  2. Career Development Patterns and Values of Women School Administrators

    ERIC Educational Resources Information Center

    Loyola, Matilde Corazon Cristina A.

    2016-01-01

    Career development research has often explored gender differences in and development of career patterns. Women were traditionally sidelined from performing from full participation in society and have struggled for their civil rights and social freedoms by challenging the male-dominated social systems. In an age when women are now gaining strong…

  3. Generation of optical crystals and quasicrystal beams: Kaleidoscopic patterns and phase singularity

    SciTech Connect

    Chen, Y. F.; Liang, H. C.; Lin, Y. C.; Tzeng, Y. S.; Su, K. W.; Huang, K. F.

    2011-05-15

    We explore the feasibility of the generation of pseudonondiffracting optical beams related to crystal and quasicrystal structures. It is experimentally confirmed that optical crystal and quasicrystal beams can be remarkably generated with a collimated light to illuminate a high-precision mask with multiple apertures regularly distributed on a ring. We also found that exotic kaleidoscopic patterns can be exhibited with the high-order quasicrystal beams. More importantly, the structures of phase singularities in optical quasicrystal beams are manifested.

  4. Influence of next-generation sequencing and storage conditions on miRNA patterns generated from PAXgene blood.

    PubMed

    Backes, Christina; Leidinger, Petra; Altmann, Gabriela; Wuerstle, Maximilian; Meder, Benjamin; Galata, Valentina; Mueller, Sabine C; Sickert, Daniel; Stähler, Cord; Meese, Eckart; Keller, Andreas

    2015-09-01

    Whole blood derived miRNA signatures determined by Next-Generation Sequencing (NGS) offer themselves as future minimally invasive biomarkers for various human diseases. The PAXgene system is a commonly used blood storage system for miRNA analysis. Central to all miRNA analyses that aim to identify disease specific miRNA signatures, is the question of stability and variability of the miRNA profiles that are generated by NGS. We characterized the influence of five different conditions on the genome wide miRNA expression pattern of human blood isolated in PAXgene RNA tubes. In detail, we analyzed 15 miRNomes from three individuals. The blood was subjected to different numbers of freeze/thaw cycles and analyzed for the influence of storage at -80 or 8 °C. We also determined the influence of blood collection and NGS preparations on the miRNA pattern isolated from a single individual, which has been sequenced 10 times. Here, five PAXGene tubes were consecutively collected that have been split in two replicates, representing two experimental batches. All samples were analyzed by Illumina NGS. For each sample, approximately 20 million NGS reads have been generated. Hierarchical clustering and Principal Component Analysis (PCA) showed an influence of the different conditions on the miRNA patterns. The effects of the different conditions on miRNA abundance are, however, smaller than the differences that are due to interindividual variability. We also found evidence for an influence of the NGS measurement on the miRNA pattern. Specifically, hsa-miR-1271-5p and hsa-miR-182-5p showed coefficients of variation above 100% indicating a strong influence of the NGS protocol on the abundance of these miRNAs. PMID:26207298

  5. Spontaneous neuronal burst discharges as dependent and independent variables in the maturation of cerebral cortex tissue cultured in vitro: a review of activity-dependent studies in live 'model' systems for the development of intrinsically generated bioelectric slow-wave sleep patterns.

    PubMed

    Corner, Michael A

    2008-11-01

    A survey is presented of recent experiments which utilize spontaneous neuronal spike trains as dependent and/or independent variables in developing cerebral cortex cultures when synaptic transmission is interfered with for varying periods of time. Special attention is given to current difficulties in selecting suitable preparations for carrying out biologically relevant developmental studies, and in applying spike-train analysis methods with sufficient resolution to detect activity-dependent age and treatment effects. A hierarchy of synchronized nested burst discharges which approximate early slow-wave sleep patterns in the intact organism is established as a stable basis for isolated cortex function. The complexity of reported long- and short-term homeostatic responses to experimental interference with synaptic transmission is reviewed, and the crucial role played by intrinsically generated bioelectric activity in the maturation of cortical networks is emphasized. PMID:18722470

  6. Next-Generation Ion Propulsion Being Developed

    NASA Technical Reports Server (NTRS)

    Patterson, Michael J.; Soulas, George C.; Foster, John E.; Haag, Thomas W.; Pinero, Luis R.; Rawlin, Vincent K.; Doehne, S. Michelle

    2001-01-01

    The NASA Glenn Research Center ion-propulsion program addresses the need for high specific-impulse systems and technology across a broad range of mission applications and power levels. One activity is the development of the next-generation ion-propulsion system as a follow-on to the successful Deep Space 1 system. The system is envisioned to incorporate a lightweight ion engine that can operate over 1 to 10 kW, with a 550-kg propellant throughput capacity. The engine concept under development has a 40-cm beam diameter, twice the effective area of the Deep Space 1 engine. It incorporates mechanical features and operating conditions to maximize the design heritage established by the Deep Space 1 engine, while incorporating new technology where warranted to extend the power and throughput capability. Prototype versions of the engine have been fabricated and are under test at NASA, with an engineering model version in manufacturing. Preliminary performance data for the prototype engine have been documented over 1.1- to 7.3-kW input power. At 7.3 kW, the engine efficiency is 0.68, at 3615-sec specific impulse. Critical component temperatures, including those of the discharge cathode assembly and magnets, have been documented and are within established limits, with significant margins relative to the Deep Space 1 engine. The 1- to 10-kW ion thruster approach described here was found to provide the needed power and performance improvement to enable important NASA missions. The Integrated In-Space Transportation Planning (IISTP) studies compared many potential technologies for various NASA, Government, and commercial missions. These studies indicated that a high-power ion propulsion system is the most important technology for development because of its outstanding performance versus perceived development and recurring costs for interplanetary solar electric propulsion missions. One of the best applications of a highpower electric propulsion system was as an integral part

  7. Developing instrumentation to characterize thermoelectric generator modules

    NASA Astrophysics Data System (ADS)

    Liu, Dawei; Li, Qiming; Peng, Wenbo; Zhu, Lianjun; Gao, Hu; Meng, Qingsen; Jin, A. J.

    2015-03-01

    Based on the law of physics, known as "Seebeck effect," a thermoelectric generator (TEG) produces electricity when the temperature differential is applied across the TEG. This article reports a precision method in characterizing TEG modules. A precision instrument is constructed to study thermoelectric conversion in terms of output power and efficiency of TEG modules. The maximum allowable TEG module size is 150 mm, and the preferred size is from 30 mm to 60 mm. During measurements, the highest hot side temperature is 500 °C and the cold side temperature can be adjusted from room temperature to 100 °C. A mechanical structure is developed to control the pressure and parallelism of the clamping force of the TEG on both its hot and cold sides. A heat flux measurement module is installed at its cold side, and the heat flux through TEGs can be measured in position. Finally, the energy conversion efficiency of TEGs is calculated from experimental data of both an output power and a heat flux.

  8. Developing instrumentation to characterize thermoelectric generator modules.

    PubMed

    Liu, Dawei; Li, Qiming; Peng, Wenbo; Zhu, Lianjun; Gao, Hu; Meng, Qingsen; Jin, A J

    2015-03-01

    Based on the law of physics, known as "Seebeck effect," a thermoelectric generator (TEG) produces electricity when the temperature differential is applied across the TEG. This article reports a precision method in characterizing TEG modules. A precision instrument is constructed to study thermoelectric conversion in terms of output power and efficiency of TEG modules. The maximum allowable TEG module size is 150 mm, and the preferred size is from 30 mm to 60 mm. During measurements, the highest hot side temperature is 500 °C and the cold side temperature can be adjusted from room temperature to 100 °C. A mechanical structure is developed to control the pressure and parallelism of the clamping force of the TEG on both its hot and cold sides. A heat flux measurement module is installed at its cold side, and the heat flux through TEGs can be measured in position. Finally, the energy conversion efficiency of TEGs is calculated from experimental data of both an output power and a heat flux. PMID:25832254

  9. Development of tungsten-tantalum generator

    NASA Technical Reports Server (NTRS)

    Leblanc, A.; Babich, J.; Jhingran, S. G.

    1985-01-01

    The purpose of this project was to develop a useable tungsten (W)/tantalum (Ta) generator. Ta-178 is formed following the decay of its parent, W-178 (half-life: 21.7d) and has a half life of 9.3 minutes in turn yielding stable Hf-178. The decay of the parent isotope (W-178) occurs entirely by electron capture to the 9.3 minute Ta-178 state, without feeding the high spin Ta-178 isomer (half life 2.2 hours). In Ta-178 decay, 99.2% of the disintegrations proceed by electron capture and 0.18% by positron emission. Electron capture results in a 61.2% branch to the ground state of Hf-178 and 33.7% to the first excited state at 93 1KeV. The most prominent features of the radionuclide's energy spectrum are the hafnium characteristic radiation peaks with energies between 54.6 and 65.0 KeV. The radiation exposure dose of Ta-118 was calculated to be approximately one-twentieth that of Tc-99m on a per millicurie basis. A twenty-fold reduction in radiation exposure from Ta-178 compared with Tc-99m means that the usual administered dose can be increased three or four times, greatly increasing statistical accuracy while reducing radiation exposure by a factor of five.

  10. Development of Next Generation Multiphase Pipe Flow Prediction Tools

    SciTech Connect

    Cem Sarica; Holden Zhang

    2006-05-31

    The developments of oil and gas fields in deep waters (5000 ft and more) will become more common in the future. It is inevitable that production systems will operate under multiphase flow conditions (simultaneous flow of gas, oil and water possibly along with sand, hydrates, and waxes). Multiphase flow prediction tools are essential for every phase of hydrocarbon recovery from design to operation. Recovery from deep-waters poses special challenges and requires accurate multiphase flow predictive tools for several applications, including the design and diagnostics of the production systems, separation of phases in horizontal wells, and multiphase separation (topside, seabed or bottom-hole). It is crucial for any multiphase separation technique, either at topside, seabed or bottom-hole, to know inlet conditions such as flow rates, flow patterns, and volume fractions of gas, oil and water coming into the separation devices. Therefore, the development of a new generation of multiphase flow predictive tools is needed. The overall objective of the proposed study is to develop a unified model for gas-oil-water three-phase flow in wells, flow lines, and pipelines to predict flow characteristics such as flow patterns, phase distributions, and pressure gradient encountered during petroleum production at different flow conditions (pipe diameter and inclination, fluid properties and flow rates). In the current multiphase modeling approach, flow pattern and flow behavior (pressure gradient and phase fractions) prediction modeling are separated. Thus, different models based on different physics are employed, causing inaccuracies and discontinuities. Moreover, oil and water are treated as a pseudo single phase, ignoring the distinct characteristics of both oil and water, and often resulting in inaccurate design that leads to operational problems. In this study, a new model is being developed through a theoretical and experimental study employing a revolutionary approach. The

  11. Variation in motor output and motor performance in a centrally generated motor pattern

    PubMed Central

    Norris, Brian J.; Doloc-Mihu, Anca; Calabrese, Ronald L.

    2014-01-01

    Central pattern generators (CPGs) produce motor patterns that ultimately drive motor outputs. We studied how functional motor performance is achieved, specifically, whether the variation seen in motor patterns is reflected in motor performance and whether fictive motor patterns differ from those in vivo. We used the leech heartbeat system in which a bilaterally symmetrical CPG coordinates segmental heart motor neurons and two segmented heart tubes into two mutually exclusive coordination modes: rear-to-front peristaltic on one side and nearly synchronous on the other, with regular side-to-side switches. We assessed individual variability of the motor pattern and the beat pattern in vivo. To quantify the beat pattern we imaged intact adults. To quantify the phase relations between motor neurons and heart constrictions we recorded extracellularly from two heart motor neurons and movement from the corresponding heart segments in minimally dissected leeches. Variation in the motor pattern was reflected in motor performance only in the peristaltic mode, where larger intersegmental phase differences in the motor neurons resulted in larger phase differences between heart constrictions. Fictive motor patterns differed from those in vivo only in the synchronous mode, where intersegmental phase differences in vivo had a larger front-to-rear bias and were more constrained. Additionally, load-influenced constriction timing might explain the amplification of the phase differences between heart segments in the peristaltic mode and the higher variability in motor output due to body shape assumed in this soft-bodied animal. The motor pattern determines the beat pattern, peristaltic or synchronous, but heart mechanics influence the phase relations achieved. PMID:24717348

  12. Dynamics of skeletal pattern formation in developing chick limb.

    PubMed

    Newman, S A; Frisch, H L

    1979-08-17

    During development of the embryonic chick limb the skeletal pattern is laid out as cartilaginous primordia, which emerge in a proximodistal sequence over a period of 4 days. The differentiation of cartilage is preceded by changes in cellular contacts at specific locations in the precartilage mesenchyme. Under realistic assumptions, the biosynthesis and diffusion through the extracellular matrix of a cell surface protein, such as fibronectin, will lead to spatial patterns of this molecule that could be the basis of the emergent primordia. As cellular differentiation proceeds, the size of the mesenchymal diffusion chamber is reduced in descrete steps, leading to sequential reorganizations of the morphogen pattern. The successive patterns correspond to observed rows of skeletal elements, whose emergence, in theory and in practice, depends on the maintenance of a unique boundary condition at the limb bud apex. PMID:462174

  13. Development of dietary pattern evaluation tool for adults and correlation with Dietary Quality Index

    PubMed Central

    Lee, Yeo Do; Kim, Kyung Won; Choi, Kyung-Suk; Kim, Misung; Cho, Yeo Jin

    2016-01-01

    BACKGROUND/OBJECTIVES As the prevalence of chronic diseases has risen, the need for straightforward diagnostic tools for monitoring nutrition status to improve nutrition counseling and disease prevention has likewise increased. This study developed an easily usable dietary behavior pattern diagnosis checklist and investigated its correlation with dietary quality index. SUBJECTS/METHODS A draft dietary pattern evaluation tool was generated by analyzing previous studies. The draft questionnaire comprised 61 questions for assessing dietary habits. A survey was administered to 320 adults (19 to 64 years old) using the dietary pattern evaluation tool and 24-hour-recall method between March and May of 2014 in Jeonbuk province and the metropolitan area. Principal component analysis with varimax rotation was performed to identify dietary behavior patterns. Nutritional analysis was conducted using CAN-Pro 4.0, and the Diet Quality Index-International (DQI-I) was calculated to assess dietary quality. The correlation between dietary pattern scores and DQI-I scores was also analyzed. RESULTS The factor analysis resulted in a total of 34 questions mapped to four main dietary behavior patterns: "high fat and calorie" pattern (12 questions), "overeating/binge" pattern (nine questions), "dietary impulse" pattern (eight questions), and "unbalanced food intake" pattern (five questions). The four dietary behavior patterns were negatively correlated with DQI-I adequacy and total scores (P < 0.01). CONCLUSIONS The dietary pattern evaluation tool developed in this study can be used to diagnose a client's dietary behavior problems and is available as a nutrition counseling tool in the field. PMID:27247727

  14. Forecasting and evaluating patterns of energy development in southwestern Wyoming

    USGS Publications Warehouse

    Garman, Steven L.

    2015-01-01

    The effects of future oil and natural gas development in southwestern Wyoming on wildlife populations are topical to conservation of the sagebrush steppe ecosystem. To aid in understanding these potential effects, the U.S. Geological Survey developed an Energy Footprint simulation model that forecasts the amount and pattern of energy development under different assumptions of development rates and well-drilling methods. The simulated disturbance patterns produced by the footprint model are used to assess the potential effects on wildlife habitat and populations. A goal of this modeling effort is to use measures of energy production (number of simulated wells), well-pad and road-surface disturbance, and potential effects on wildlife to identify build-out designs that minimize the physical and ecological footprint of energy development for different levels of energy production and development costs.

  15. Student-Generated Content in College Teaching: Content Quality, Behavioural Pattern and Learning Performance

    ERIC Educational Resources Information Center

    Yang, X.; Guo, X.; Yu, S.

    2016-01-01

    This study investigates the quality of course content, behavioural patterns of students and learning performance in teaching of student-generated content (SGC). A total of 49 third-year university students in educational technology participated in this study. By combining the methods of questionnaire, lag sequence analysis and interview, the study…

  16. Dynamic mechanisms of generation of oscillatory cluster patterns in a globally coupled chemical system

    NASA Astrophysics Data System (ADS)

    Rotstein, Horacio G.; Wu, Hui

    2012-09-01

    We use simulations and dynamical systems tools to investigate the mechanisms of generation of phase-locked and localized oscillatory cluster patterns in a globally coupled Oregonator model where the activator receives global feedback from the inhibitor, mimicking experimental results observed in the photosensitive Belousov-Zhabotinsky reaction. A homogeneous two-cluster system (two clusters with equal cluster size) displays antiphase patterns. Heterogenous two-cluster systems (two clusters with different sizes) display both phase-locked and localized patterns depending on the parameter values. In a localized pattern the oscillation amplitude of the largest cluster is roughly an order of magnitude smaller than the oscillation amplitude of the smaller cluster, reflecting the effect of self-inhibition exerted by the global feedback term. The transition from phase-locked to localized cluster patterns occurs as the intensity of global feedback increases. Three qualitatively different basic mechanisms, described previously for a globally coupled FitzHugh-Nagumo model, are involved in the generation of the observed patterns. The swing-and-release mechanism is related to the canard phenomenon (canard explosion of limit cycles) in relaxation oscillators. The hold-and-release and hold-and-escape mechanisms are related to the release and escape mechanisms in synaptically connected neural models. The methods we use can be extended to the investigation of oscillatory chemical reactions with other types of non-local coupling.

  17. Dynamic mechanisms of generation of oscillatory cluster patterns in a globally coupled chemical system.

    PubMed

    Rotstein, Horacio G; Wu, Hui

    2012-09-14

    We use simulations and dynamical systems tools to investigate the mechanisms of generation of phase-locked and localized oscillatory cluster patterns in a globally coupled Oregonator model where the activator receives global feedback from the inhibitor, mimicking experimental results observed in the photosensitive Belousov-Zhabotinsky reaction. A homogeneous two-cluster system (two clusters with equal cluster size) displays antiphase patterns. Heterogenous two-cluster systems (two clusters with different sizes) display both phase-locked and localized patterns depending on the parameter values. In a localized pattern the oscillation amplitude of the largest cluster is roughly an order of magnitude smaller than the oscillation amplitude of the smaller cluster, reflecting the effect of self-inhibition exerted by the global feedback term. The transition from phase-locked to localized cluster patterns occurs as the intensity of global feedback increases. Three qualitatively different basic mechanisms, described previously for a globally coupled FitzHugh-Nagumo model, are involved in the generation of the observed patterns. The swing-and-release mechanism is related to the canard phenomenon (canard explosion of limit cycles) in relaxation oscillators. The hold-and-release and hold-and-escape mechanisms are related to the release and escape mechanisms in synaptically connected neural models. The methods we use can be extended to the investigation of oscillatory chemical reactions with other types of non-local coupling. PMID:22979891

  18. Pattern-generating travelling waves in a discrete multicellular system with lateral inhibition

    NASA Astrophysics Data System (ADS)

    Plahte, Erik; Øyehaug, Leiv

    2007-02-01

    On a one-dimensional string of cells, the juxtacrine signalling model for Delta-Notch lateral inhibition by Collier et al. [J.R. Collier, N.A.M. Monk, P.K. Maini, J.H. Lewis, Pattern formation by lateral inhibition with feedback: A mathematical model of Delta-Notch intercellular interaction, J. Theoret. Biol. 183 (1996) 429-446] exhibits a predominant alternating pattern of cells expressing either Delta or Notch, as well as many aperiodic patterns. Despite this multistationarity, in the idealised situation of no noise, travelling waves invading the unstable, homogeneous state only generate the predominant alternating pattern in their wake all over the lattice. However, this robustness is totally lost in the presence of stochastic noise because the invaded, initial state is unstable. Using linear approximations around the initial, homogeneous state and around the final, patterned state, we are able to derive analytically all essential properties of the wave: the shape of the wave front, the unique, alternating pattern generated by the wave, and the asymptotic speed of the wave front. We show that the asymptotic wave speed equals the theoretical minimum wave speed. The latter agrees extremely well with the value estimated from numerical simulations. Thus, in this system travelling waves are pulled by the leading edge of the front.

  19. Directivity patterns of laser-generated sound in solids: Effects of optical and thermal parameters.

    PubMed

    Krylov, Victor V

    2016-07-01

    In the present paper, directivity patterns of laser-generated sound in solids are investigated theoretically. Two main approaches to the calculation of directivity patterns of laser-generated sound are discussed for the most important case of thermo-optical regime of generation. The first approach, which is widely used in practice, is based on the simple modelling of the equivalent thermo-optical source as a mechanical dipole comprising two horizontal forces applied to the surface in opposite directions. The second approach is based on the rigorous theory that takes into account all acoustical, optical and thermal parameters of a solid material and all geometrical and physical parameters of a laser beam. Directivity patterns of laser-generated bulk longitudinal and shear elastic waves, as well as the amplitudes of generated Rayleigh surface waves, are calculated for different values of physical and geometrical parameters and compared with the directivity patterns calculated in case of dipole-source representation. It is demonstrated that the simple approach using a dipole-source representation of laser-generated sound is rather limited, especially for description of generated longitudinal acoustic waves. A practical criterion is established to define the conditions under which the dipole-source representation gives predictions with acceptable errors. It is shown that, for radiation in the normal direction to the surface, the amplitudes of longitudinal waves are especially sensitive to the values of thermal parameters and of the acoustic reflection coefficient from a free solid surface. A discussion is given on the possibility of using such a high sensitivity to the values of the reflection coefficient for investigation of surface properties of real solids. PMID:26851995

  20. Wide-field depth-sectioning fluorescence microscopy using projector-generated patterned illumination.

    PubMed

    Delica, Serafin; Blanca, Carlo Mar

    2007-10-10

    We present a simple and cost-effective wide-field, depth-sectioning, fluorescence microscope utilizing a commercial multimedia projector to generate excitation patterns on the sample. Highly resolved optical sections of fluorescent pollen grains at 1.9 microm axial resolution are constructed using the structured illumination technique. This requires grid excitation patterns to be scanned across the sample, which is straightforwardly implemented by creating slideshows of gratings at different phases, projecting them onto the sample, and synchronizing camera acquisition with slide transition. In addition to rapid dynamic pattern generation, the projector provides high illumination power and spectral excitation selectivity. We exploit these properties by imaging mouse neural cells in cultures multistained with Alexa 488 and Cy3. The spectral and structural neural information is effectively resolved in three dimensions. The flexibility and commercial availability of this light source is envisioned to open multidimensional imaging to a broader user base. PMID:17932535

  1. Generation of mask patterns for diffractive optical elements using Mathematica{sup T}{sup M}

    SciTech Connect

    OShea, D.C.

    1996-07-01

    The generation of binary and grayscale masks used in the fabrication of diffractive optical elements is usually performed using a proprietary piece of software or a computer-aided drafting package. Once the pattern is computed or designed, it must be output to a plotting or imaging system that will produce a reticle plate. This article describes a number of short Mathematica modules that can be used to generate binary and grayscale patterns in a PostScript-compatible format. Approaches to ensure that the patterns are directly related to the function of the element and the design wavelength are discussed. A procedure to preserve the scale of the graphic output when it is transferred to another application is given. Examples of surfaces for a 100 mm effective focal length lens and an Alvarez surface are given. {copyright} {ital 1996 American Institute of Physics.}

  2. Advances in early kidney specification, development and patterning

    PubMed Central

    Dressler, Gregory R.

    2009-01-01

    The kidney is a model developmental system for understanding mesodermal patterning and organogenesis, a process that requires regional specification along multiple body axes, the proliferation and differentiation of progenitor cells, and integration with other tissues. Recent progress in the field has highlighted the essential roles of intrinsic nuclear factors and secreted signaling molecules in specifying renal epithelial stem cells and their self-renewal, in driving the complex dynamics of epithelial cell branching morphogenesis, and in nephron patterning. How these developments influence and advance our understanding of kidney development is discussed. PMID:19906853

  3. Development of a generator stator insulation system

    NASA Astrophysics Data System (ADS)

    Buritz, R. S.

    1983-04-01

    The insulation of stator windings in generators is an old technology, dating to the turn of the century with kraft paper insulated, oil filled cables. Recently, two new classes of machines requiring much more advanced techniques of insulation have emerged. These generators are designed for relatively short duty in situations where light weight and small size are crucial to the overall mission, and mobility is a must. One class of machines uses superconducting windings to achieve small size. The other class consists of conventional generators designed to have extremely high power densities and specific powers. These machines represent a considerable engineering achievement, being significantly smaller than any previous generator. In one of these generators, manufactured by Bendix, substantial problems have been encountered in the stator winding insulation, because of the high fields dictated by the extremely high power density. This report presents the Hughes Aircraft Company approach and solution to these problems.

  4. TCM Pattern Questionnaire for Lateral Elbow Pain: Development of an Instrument via a Delphi Process

    PubMed Central

    Bian, Zhao-Xiang

    2016-01-01

    Individualized acupuncture treatment has been practiced for pain therapy. This study used acupuncture treatment for lateral elbow pain (LEP) as an example to study the diagnostic practice of individualized acupuncture treatment. A provisional version of LEP pattern questionnaire was developed based on a recent systematic review on TCM pattern diagnosis for LEP. A Delphi panel of 33 clinical experts from seven different countries was formed, and the Delphi survey was conducted in Chinese and English language for two rounds. Consensus was achieved from all 26 panelists who responded to the second round on 243 items of the instrument, which included a 72-question-long questionnaire. The mean level of expert consensus on the items of the final questionnaire was 85%. Consensus was found on four TCM patterns that could underlie LEP, namely, the wind-cold-dampness pattern, the qi stagnation and blood stasis pattern, the dual deficiency of qi and blood pattern, and the retained dampness-heat pattern. A list of signs and symptoms indicating one of the four TCM patterns and a list of preferred treatment modalities for each pattern were also generated. Our instrument shows considerable content validity. Further validity and reliability studies are under way. PMID:27525024

  5. TCM Pattern Questionnaire for Lateral Elbow Pain: Development of an Instrument via a Delphi Process.

    PubMed

    Gadau, Marcus; Zhang, Shi-Ping; Yeung, Wing-Fai; Bian, Zhao-Xiang; Lu, Ai-Ping

    2016-01-01

    Individualized acupuncture treatment has been practiced for pain therapy. This study used acupuncture treatment for lateral elbow pain (LEP) as an example to study the diagnostic practice of individualized acupuncture treatment. A provisional version of LEP pattern questionnaire was developed based on a recent systematic review on TCM pattern diagnosis for LEP. A Delphi panel of 33 clinical experts from seven different countries was formed, and the Delphi survey was conducted in Chinese and English language for two rounds. Consensus was achieved from all 26 panelists who responded to the second round on 243 items of the instrument, which included a 72-question-long questionnaire. The mean level of expert consensus on the items of the final questionnaire was 85%. Consensus was found on four TCM patterns that could underlie LEP, namely, the wind-cold-dampness pattern, the qi stagnation and blood stasis pattern, the dual deficiency of qi and blood pattern, and the retained dampness-heat pattern. A list of signs and symptoms indicating one of the four TCM patterns and a list of preferred treatment modalities for each pattern were also generated. Our instrument shows considerable content validity. Further validity and reliability studies are under way. PMID:27525024

  6. Patterned mask inspection technology with Projection Electron Microscope (PEM) technique for 11 nm half-pitch (hp) generation EUV masks

    NASA Astrophysics Data System (ADS)

    Hirano, Ryoichi; Iida, Susumu; Amano, Tsuyoshi; Watanabe, Hidehiro; Hatakeyama, Masahiro; Murakami, Takeshi; Yoshikawa, Shoji; Suematsu, Kenichi; Terao, Kenji

    2015-07-01

    High-sensitivity EUV mask pattern defect detection is one of the major issues in order to realize the device fabrication by using the EUV lithography. We have already designed a novel Projection Electron Microscope (PEM) optics that has been integrated into a new inspection system named EBEYE-V30 ("Model EBEYE" is an EBARA's model code), and which seems to be quite promising for 16 nm hp generation EUVL Patterned mask Inspection (PI). Defect inspection sensitivity was evaluated by capturing an electron image generated at the mask by focusing onto an image sensor. The progress of the novel PEM optics performance is not only about making an image sensor with higher resolution but also about doing a better image processing to enhance the defect signal. In this paper, we describe the experimental results of EUV patterned mask inspection using the above-mentioned system. The performance of the system is measured in terms of defect detectability for 11 nm hp generation EUV mask. To improve the inspection throughput for 11 nm hp generation defect detection, it would require a data processing rate of greater than 1.5 Giga- Pixel-Per-Second (GPPS) that would realize less than eight hours of inspection time including the step-and-scan motion associated with the process. The aims of the development program are to attain a higher throughput, and enhance the defect detection sensitivity by using an adequate pixel size with sophisticated image processing resulting in a higher processing rate.

  7. Production patterns of packaging waste categories generated at typical Mediterranean residential building worksites.

    PubMed

    González Pericot, N; Villoria Sáez, P; Del Río Merino, M; Liébana Carrasco, O

    2014-11-01

    The construction sector is responsible for around 28% of the total waste volume generated in Europe, which exceeds the amount of household waste. This has led to an increase of different research studies focusing on construction waste quantification. However, within the research studies made, packaging waste has been analyzed to a limited extent. This article focuses on the packaging waste stream generated in the construction sector. To this purpose current on-site waste packaging management has been assessed by monitoring ten Mediterranean residential building works. The findings of the experimental data collection revealed that the incentive measures implemented by the construction company to improve on-site waste sorting failed to achieve the intended purpose, showing low segregation ratios. Subsequently, through an analytical study the generation patterns for packaging waste are established, leading to the identification of the prevailing kinds of packaging and the products responsible for their generation. Results indicate that plastic waste generation maintains a constant trend throughout the whole construction process, while cardboard becomes predominant towards the end of the construction works with switches and sockets from the electricity stage. Understanding the production patterns of packaging waste will be beneficial for adapting waste management strategies to the identified patterns for the specific nature of packaging waste within the context of construction worksites. PMID:25081852

  8. EIDA Next Generation: ongoing and future developments

    NASA Astrophysics Data System (ADS)

    Strollo, Angelo; Quinteros, Javier; Sleeman, Reinoud; Trani, Luca; Clinton, John; Stammler, Klaus; Danecek, Peter; Pedersen, Helle; Ionescu, Constantin

    2015-04-01

    The European Integrated Data Archive (EIDA; http://www.orfeus-eu.org/eida/eida.html) is the distributed Data Centre system within ORFEUS, providing transparent access and services to high quality, seismic data across (currently) 9 large data archives in Europe. EIDA is growing, in terms of the number of participating data centres, the size of the archives, the variability of the data in the archives, the number of users, and the volume of downloads. The on-going success of EIDA is thus providing challenges that are the driving force behind the design of the next generation (NG) of EIDA, which is expected to be implemented within EPOS IP. EIDA ORFEUS must cope with further expansion of the system and more complex user requirements by developing new techniques and extended services. The EIDA NG is being designed to work on standard FDSN web services and two additional new web services: Routing Service and QC (quality controlled) service. This presentation highlights the challenges EIDA needs to address during the EPOS IP and focuses on these 2 new services. The Routing Service can be considered as the core of EIDA NG. It was designed to assist users and clients to locate data within a federated, decentralized data centre (e.g. EIDA). A detailed, FDSN-compliant specification of the service has been developed. Our implementation of this service will run at every EIDA node, but is also capable of running on a user's computer, allowing anyone to define virtual or integrate existing data centres. This (meta)service needs to be queried in order to locate the data. Some smart clients (in a beta status) have been also provided to offer the user an integrated view of the whole EIDA, hiding the complexity of its internal structure. The service is open and able to be queried by anyone without the need of credentials or authentication. The QC Service is developed to cope with user requirements to query for relevant data only. The web service provides detailed information on the

  9. Symmetry constraints during the development of anisotropic spinodal patterns

    NASA Astrophysics Data System (ADS)

    Sánchez-Muñoz, Luis; Del Campo, Adolfo; Fernández, José F.

    2016-02-01

    Spinodal decomposition is a phase-separation phenomenon occurring at non-equilibrium conditions. In isotropic materials, it is expected to improve the physical properties, in which modulated structures arise from a single system of spinodal waves. However, in anisotropic materials this process is controversial and not very well understood. Here, we report anisotropic spinodal decomposition patterns in single crystals of K-rich feldspar with macroscopic monoclinic 2/m symmetry. The periodicity of the spinodal waves at ~450 nm produces a blue iridescence, typical of the gemstone moonstone. Stripe patterns in the (010) plane, labyrinthine patterns in the (100) plane, and coexistence of the two patterns in the (110) plane are first resolved by scanning Rayleigh scattering microscopy. Two orthogonal systems of spinodal waves with the same periodicity are derived from the features and orientations of the patterns on the crystal surfaces. The orthogonality of the waves is related to the perpendicularity of the binary axis and the mirror plane. Thus, the spinodal patterns must be controlled by symmetry constraints during phase separation at early stages. Unusual and new properties could be developed in other anisotropic materials by thermal treatment inducing two orthogonal systems of periodic spinodal waves.

  10. Symmetry constraints during the development of anisotropic spinodal patterns.

    PubMed

    Sánchez-Muñoz, Luis; Del Campo, Adolfo; Fernández, José F

    2016-01-01

    Spinodal decomposition is a phase-separation phenomenon occurring at non-equilibrium conditions. In isotropic materials, it is expected to improve the physical properties, in which modulated structures arise from a single system of spinodal waves. However, in anisotropic materials this process is controversial and not very well understood. Here, we report anisotropic spinodal decomposition patterns in single crystals of K-rich feldspar with macroscopic monoclinic 2/m symmetry. The periodicity of the spinodal waves at ~450 nm produces a blue iridescence, typical of the gemstone moonstone. Stripe patterns in the (010) plane, labyrinthine patterns in the (100) plane, and coexistence of the two patterns in the (110) plane are first resolved by scanning Rayleigh scattering microscopy. Two orthogonal systems of spinodal waves with the same periodicity are derived from the features and orientations of the patterns on the crystal surfaces. The orthogonality of the waves is related to the perpendicularity of the binary axis and the mirror plane. Thus, the spinodal patterns must be controlled by symmetry constraints during phase separation at early stages. Unusual and new properties could be developed in other anisotropic materials by thermal treatment inducing two orthogonal systems of periodic spinodal waves. PMID:26860067

  11. Symmetry constraints during the development of anisotropic spinodal patterns

    PubMed Central

    Sánchez-Muñoz, Luis; del Campo, Adolfo; Fernández, José F.

    2016-01-01

    Spinodal decomposition is a phase-separation phenomenon occurring at non-equilibrium conditions. In isotropic materials, it is expected to improve the physical properties, in which modulated structures arise from a single system of spinodal waves. However, in anisotropic materials this process is controversial and not very well understood. Here, we report anisotropic spinodal decomposition patterns in single crystals of K-rich feldspar with macroscopic monoclinic 2/m symmetry. The periodicity of the spinodal waves at ~450 nm produces a blue iridescence, typical of the gemstone moonstone. Stripe patterns in the (010) plane, labyrinthine patterns in the (100) plane, and coexistence of the two patterns in the (110) plane are first resolved by scanning Rayleigh scattering microscopy. Two orthogonal systems of spinodal waves with the same periodicity are derived from the features and orientations of the patterns on the crystal surfaces. The orthogonality of the waves is related to the perpendicularity of the binary axis and the mirror plane. Thus, the spinodal patterns must be controlled by symmetry constraints during phase separation at early stages. Unusual and new properties could be developed in other anisotropic materials by thermal treatment inducing two orthogonal systems of periodic spinodal waves. PMID:26860067

  12. 2nd Generation ELT Performance Specification Development

    NASA Technical Reports Server (NTRS)

    Stimson, Chad M.

    2015-01-01

    NASA Search And Rescue is supporting RTCA SC-229 with research and recommendations for performance specifications for the 2nd generation of emergency locator transmitters. Areas for improvement and methods for collecting data will be presented.

  13. Generational Patterns in Mexican Americans' Academic Performance in an Unwelcoming Political Context

    PubMed Central

    Moosmann, Danyel A. V.; Roosa, Mark W.; Knight, George P.

    2014-01-01

    Research has shown that immigrant students often do better academically than their U.S.-born peers from the same ethnic group but it is unclear whether this pattern holds for Mexican Americans. We examined the academic performance of four generations of Mexican American students from fifth to 10th grade looking for generation differences and explanations for them. Using data from 749 families, we tested a model with fifth grade variables that differed by generation as potential mediators linking student generation to 10th grade academic performance. Results showed that immigrants were academically behind at fifth grade but caught up by seventh. Only economic hardship mediated the long term relationship between student generation and 10th grade academic performance; maternal educational expectations and child language hassles, English usage, discrimination, and mainstream values helped explained the early academic deficit of immigrant children. The results identified potential targets for interventions to improve Mexican American students' academic performance. PMID:24578588

  14. Development of peptide-based patterns by laser transfer

    NASA Astrophysics Data System (ADS)

    Dinca, V.; Kasotakis, E.; Catherine, J.; Mourka, A.; Mitraki, A.; Popescu, A.; Dinescu, M.; Farsari, M.; Fotakis, C.

    2007-12-01

    Peptide-based arrays and patterns have provided a powerful tool in the study of protein recognition and function. A variety of applications have been identified, including the interactions between peptides-enzymes, peptides-proteins, peptides-DNA, peptides-small molecules and peptides-cells. One of the main and most critical unresolved issues is the generation of high-density arrays which maintain the biological function of the peptides. In this study, we employ nanosecond laser-induced forward transfer for the generation of high-density peptide arrays and patterns on modified glass surfaces. We show that peptide-based microarrays can be fabricated on solid surfaces and specifically recognized by appropriate fluorescent tags, with the transfer not affecting the ability of the peptides to form fibrils. These initial results are poised to the construction of larger peptide patterns as scaffolds for the incorporation and display of ligands critical for cell attachment and growth, or for the templating of inorganic materials.

  15. The Reversal in Migration Patterns -- Some Rural Development Consequences.

    ERIC Educational Resources Information Center

    Ploch, Louis A.

    The reversal in migration patterns in the 1970's resulting in a net population flow from metropolitan (urban) to nonmetropolitan (rural) areas may have a variety of rural development consequences. Sizeable population increase in rural communities which traditionally have experienced net out-migration or very slow increases is evident in Maine…

  16. Linking development with generation of novelty in mammalian teeth

    PubMed Central

    Jernvall, Jukka

    2000-01-01

    The evolution of mammalian teeth is characterized by the frequent and convergent evolution of new cusps. The evolution of new cusps can be linked to tooth development via population-level variation. This allows testing whether development increases the capacity to evolve, or evolvability, by facilitating and even directing morphological change. In a population sample of living seals, variation in cusp number of individual teeth is from three to five cusps, the variably present cusps being the shortest ones that also develop last. By factoring in recent evidence on development, I show that the variation in cusp number can be explained by a patterning cascade mode of cusp development that cumulatively increases and directs height variation in short cusps. The biased variation in seal tooth cusps supports the recognition of teeth as highly evolvable because only small developmental changes are needed to produce large changes in size and number of small cusps. This evolvability of tooth cusps may have facilitated the fast and independent acquisition of new cusps in mammalian evolution. In phylogenetic studies, small cusps may be unreliable as phylogenetic signals. Population level variation can be a powerful tool in testing and generating hypotheses in developmental evolution studies. PMID:10706636

  17. Cellular basis for singing motor pattern generation in the field cricket (Gryllus bimaculatus DeGeer)

    PubMed Central

    Schöneich, Stefan; Hedwig, Berthold

    2012-01-01

    The singing behavior of male crickets allows analyzing a central pattern generator (CPG) that was shaped by sexual selection for reliable production of species-specific communication signals. After localizing the essential ganglia for singing in Gryllus bimaculatus, we now studied the calling song CPG at the cellular level. Fictive singing was initiated by pharmacological brain stimulation. The motor pattern underlying syllables and chirps was recorded as alternating spike bursts of wing-opener and wing-closer motoneurons in a truncated wing nerve; it precisely reflected the natural calling song. During fictive singing, we intracellularly recorded and stained interneurons in thoracic and abdominal ganglia and tested their impact on the song pattern by intracellular current injections. We identified three interneurons of the metathoracic and first unfused abdominal ganglion that rhythmically de- and hyperpolarized in phase with the syllable pattern and spiked strictly before the wing-opener motoneurons. Depolarizing current injection in two of these opener interneurons caused additional rhythmic singing activity, which reliably reset the ongoing chirp rhythm. The closely intermeshing arborizations of the singing interneurons revealed the dorsal midline neuropiles of the metathoracic and three most anterior abdominal neuromeres as the anatomical location of singing pattern generation. In the same neuropiles, we also recorded several closer interneurons that rhythmically hyper- and depolarized in the syllable rhythm and spiked strictly before the wing-closer motoneurons. Some of them received pronounced inhibition at the beginning of each chirp. Hyperpolarizing current injection in the dendrite revealed postinhibitory rebound depolarization as one functional mechanism of central pattern generation in singing crickets. PMID:23170234

  18. Neural basis of singing in crickets: central pattern generation in abdominal ganglia

    NASA Astrophysics Data System (ADS)

    Schöneich, Stefan; Hedwig, Berthold

    2011-12-01

    The neural mechanisms underlying cricket singing behavior have been the focus of several studies, but the central pattern generator (CPG) for singing has not been localized conclusively. To test if the abdominal ganglia contribute to the singing motor pattern and to analyze if parts of the singing CPG are located in these ganglia, we systematically truncated the abdominal nerve cord of fictively singing crickets while recording the singing motor pattern from a front-wing nerve. Severing the connectives anywhere between terminal ganglion and abdominal ganglion A3 did not preclude singing, although the motor pattern became more variable and failure-prone as more ganglia were disconnected. Singing terminated immediately and permanently after transecting the connectives between the metathoracic ganglion complex and the first unfused abdominal ganglion A3. The contribution of abdominal ganglia for singing pattern generation was confirmed by intracellular interneuron recordings and current injections. During fictive singing, an ascending interneuron with its soma and dendrite in A3 depolarized rhythmically. It spiked 10 ms before the wing-opener activity and hyperpolarized in phase with the wing-closer activity. Depolarizing current injection elicited rhythmic membrane potential oscillations and spike bursts that elicited additional syllables and reliably reset the ongoing chirp rhythm. Our results disclose that the abdominal ganglion A3 is directly involved in generating the singing motor pattern, whereas the more posterior ganglia seem to provide only stabilizing feedback to the CPG circuit. Localizing the singing CPG in the anterior abdominal neuromeres now allows analyzing its circuitry at the level of identified interneurons in subsequent studies.

  19. Production patterns of packaging waste categories generated at typical Mediterranean residential building worksites

    SciTech Connect

    González Pericot, N.; Villoria Sáez, P.; Del Río Merino, M.; Liébana Carrasco, O.

    2014-11-15

    Highlights: • On-site segregation level: 1.80%; training and motivation strategies were not effective. • 70% Cardboard waste: from switches and sockets during the building services stage. • 40% Plastic waste: generated during structures and partition works due to palletizing. • >50% Wood packaging waste, basically pallets, generated during the envelope works. - Abstract: The construction sector is responsible for around 28% of the total waste volume generated in Europe, which exceeds the amount of household waste. This has led to an increase of different research studies focusing on construction waste quantification. However, within the research studies made, packaging waste has been analyzed to a limited extent. This article focuses on the packaging waste stream generated in the construction sector. To this purpose current on-site waste packaging management has been assessed by monitoring ten Mediterranean residential building works. The findings of the experimental data collection revealed that the incentive measures implemented by the construction company to improve on-site waste sorting failed to achieve the intended purpose, showing low segregation ratios. Subsequently, through an analytical study the generation patterns for packaging waste are established, leading to the identification of the prevailing kinds of packaging and the products responsible for their generation. Results indicate that plastic waste generation maintains a constant trend throughout the whole construction process, while cardboard becomes predominant towards the end of the construction works with switches and sockets from the electricity stage. Understanding the production patterns of packaging waste will be beneficial for adapting waste management strategies to the identified patterns for the specific nature of packaging waste within the context of construction worksites.

  20. Composite axilens-axicon diffractive optical elements for generation of ring patterns with high focal depth

    NASA Astrophysics Data System (ADS)

    Dharmavarapu, Raghu; Vijayakumar, A.; Brunner, R.; Bhattacharya, Shanti

    2016-03-01

    A binary Fresnel Zone Axilens (FZA) is designed for the infinite conjugate mode and the phase profile of a refractive axicon is combined with it to generate a composite Diffractive Optical Element (DOE). The FZA designed for two focal lengths generates a line focus along the propagation direction extending between the two focal planes. The ring pattern generated by the axicon is focused through this distance and the radius of the ring depends on the propagation distance. Hence, the radius of the focused ring pattern can be tuned, during the design process, within the two focal planes. The integration of the two functions was carried out by shifting the location of zones of FZA with respect to the phase profile of the refractive axicon resulting in a binary composite DOE. The FZAs and axicons were designed for different focal depth values and base angles respectively, in order to achieve different ring radii within the focal depth of each element. The elements were simulated using scalar diffraction formula and their focusing characteristics were analyzed. The DOEs were fabricated using electron beam direct writing and evaluated using a fiber coupled diode laser. The tunable ring patterns generated by the DOEs have prospective applications in microdrilling as well as microfabrication of circular diffractive and refractive optical elements.

  1. Dictyostelium development shows a novel pattern of evolutionary conservation.

    PubMed

    Tian, Xiangjun; Strassmann, Joan E; Queller, David C

    2013-04-01

    von Baer's law states that early stages of animal development are the most conserved. More recent evidence supports a modified "hourglass" pattern in which an early but somewhat later stage is most conserved. Both patterns have been explained by the relative complexity of either temporal or spatial interactions; the greatest conservation and lowest evolvability occur at the time of the most complex interactions, because these cause larger effects that are harder for selection to alter. This general kind of explanation might apply universally across independent multicellular systems, as supported by the recent finding of the hourglass pattern in plants. We use RNA-seq expression data from the development of the slime mold Dictyostelium to demonstrate that it does not follow either of the two canonical patterns but instead tends to show the strongest conservation and weakest evolvability late in development. We propose that this is consistent with a version of the spatial constraints model, modified for organisms that never achieve a high degree of developmental modularity. PMID:23329689

  2. Rapid Generation of Multiplexed Cell Cocultures Using Acoustic Droplet Ejection Followed by Aqueous Two-Phase Exclusion Patterning

    PubMed Central

    Fang, Yu; Frampton, John P.; Raghavan, Shreya; Sabahi-Kaviani, Rahman; Luker, Gary

    2012-01-01

    The development of tools for patterning cocultures of cells is a fundamental interest among cell biologists and tissue engineers. Although a variety of systems exist for micropatterning cells, the methods used to generate cell micropatterns are often cumbersome and difficult to adapt for tissue engineering purposes. This study combines acoustic droplet ejection and aqueous two-phase system exclusion patterning to introduce a method for patterning cocultures of cells in multiplexed arrays. This new method uses focused acoustic radiation pressure to eject discrete droplets of uniform size from the surface of a dextran solution containing cells. The size of droplets is controlled by adjusting ultrasound parameters, such as pulse, duration, and amplitude. The ejected dextran droplets are captured on a cell culture substrate that is manipulated by a computer-controlled 3D positioning system according to predesigned patterns. Polyethylene glycol solution containing an additional cell type is then added to the culture dish to produce a two-phase system capable of depositing different types of cells around the initial pattern of cells. We demonstrate that our method can produce patterns of islands or lines with two or more cell types. Further, we demonstrate that patterns can be multiplexed for studies involving combinations of multiple cell types. This method offers a tool to transfer cell-containing samples in a contact-free, nozzle-less manner, avoiding sample cross-contamination. It can be used to pattern cell cocultures without complicated fabrication of culture substrates. These capabilities were used to examine the response of cancer cells to the presence of a ligand (CXCL12) secreted from surrounding cocultured cells. PMID:22356298

  3. The contribution of a central pattern generator in a reflex-based neuromuscular model

    PubMed Central

    Dzeladini, Florin; van den Kieboom, Jesse; Ijspeert, Auke

    2014-01-01

    Although the concept of central pattern generators (CPGs) controlling locomotion in vertebrates is widely accepted, the presence of specialized CPGs in human locomotion is still a matter of debate. An interesting numerical model developed in the 90s’ demonstrated the important role CPGs could play in human locomotion, both in terms of stability against perturbations, and in terms of speed control. Recently, a reflex-based neuro-musculo-skeletal model has been proposed, showing a level of stability to perturbations similar to the previous model, without any CPG components. Although exhibiting striking similarities with human gaits, the lack of CPG makes the control of speed/step length in the model difficult. In this paper, we hypothesize that a CPG component will offer a meaningful way of controlling the locomotion speed. After introducing the CPG component in the reflex model, and taking advantage of the resulting properties, a simple model for gait modulation is presented. The results highlight the advantages of a CPG as feedforward component in terms of gait modulation. PMID:25018712

  4. Building the backbone: the development and evolution of vertebral patterning.

    PubMed

    Fleming, Angeleen; Kishida, Marcia G; Kimmel, Charles B; Keynes, Roger J

    2015-05-15

    The segmented vertebral column comprises a repeat series of vertebrae, each consisting of two key components: the vertebral body (or centrum) and the vertebral arches. Despite being a defining feature of the vertebrates, much remains to be understood about vertebral development and evolution. Particular controversy surrounds whether vertebral component structures are homologous across vertebrates, how somite and vertebral patterning are connected, and the developmental origin of vertebral bone-mineralizing cells. Here, we assemble evidence from ichthyologists, palaeontologists and developmental biologists to consider these issues. Vertebral arch elements were present in early stem vertebrates, whereas centra arose later. We argue that centra are homologous among jawed vertebrates, and review evidence in teleosts that the notochord plays an instructive role in segmental patterning, alongside the somites, and contributes to mineralization. By clarifying the evolutionary relationship between centra and arches, and their varying modes of skeletal mineralization, we can better appreciate the detailed mechanisms that regulate and diversify vertebral patterning. PMID:25968309

  5. Real-time biomimetic Central Pattern Generators in an FPGA for hybrid experiments

    PubMed Central

    Ambroise, Matthieu; Levi, Timothée; Joucla, Sébastien; Yvert, Blaise; Saïghi, Sylvain

    2013-01-01

    This investigation of the leech heartbeat neural network system led to the development of a low resources, real-time, biomimetic digital hardware for use in hybrid experiments. The leech heartbeat neural network is one of the simplest central pattern generators (CPG). In biology, CPG provide the rhythmic bursts of spikes that form the basis for all muscle contraction orders (heartbeat) and locomotion (walking, running, etc.). The leech neural network system was previously investigated and this CPG formalized in the Hodgkin–Huxley neural model (HH), the most complex devised to date. However, the resources required for a neural model are proportional to its complexity. In response to this issue, this article describes a biomimetic implementation of a network of 240 CPGs in an FPGA (Field Programmable Gate Array), using a simple model (Izhikevich) and proposes a new synapse model: activity-dependent depression synapse. The network implementation architecture operates on a single computation core. This digital system works in real-time, requires few resources, and has the same bursting activity behavior as the complex model. The implementation of this CPG was initially validated by comparing it with a simulation of the complex model. Its activity was then matched with pharmacological data from the rat spinal cord activity. This digital system opens the way for future hybrid experiments and represents an important step toward hybridization of biological tissue and artificial neural networks. This CPG network is also likely to be useful for mimicking the locomotion activity of various animals and developing hybrid experiments for neuroprosthesis development. PMID:24319408

  6. The Identification of Discriminating Patterns from 16S rRNA Gene to Generate Signature for Bacillus Genus.

    PubMed

    More, Ravi P; Purohit, Hemant J

    2016-08-01

    The 16S ribosomal RNA (16S rRNA) gene has been widely used for the taxonomic classification of bacteria. A molecular signature is a set of nucleotide patterns, which constitute a regular expression that is specific to each particular taxon. Our main goal was to identify discriminating nucleotide patterns in 16S rRNA gene and then to generate signatures for taxonomic classification. To demonstrate our approach, we used the phylum Firmicutes as a model using representative taxa Bacilli (class), Bacillales (order), Bacillaceae (family), and Bacillus (genus), according to their dominance at each hierarchical taxonomic level. We applied combined composite vector and multiple sequence alignment approaches to generate gene-specific signatures. Further, we mapped all the patterns into the different hypervariable regions of 16S rRNA gene and confirmed the most appropriate distinguishing region as V3-V4 for targeted taxa. We also examined the evolution in discriminating patterns of signatures across taxonomic levels. We assessed the comparative classification accuracy of signatures with other methods (i.e., RDP Classifier, KNN, and SINA). Results revealed that the signatures for taxa Bacilli, Bacillales, Bacillaceae, and Bacillus could correctly classify isolate sequences with sensitivity of 0.99, 0.97, 0.94, and 0.89, respectively, and specificity close to 0.99. We developed signature-based software DNA Barcode Identification (DNA BarID) for taxonomic classification that is available at website http://www.neeri.res.in/DNA_BarID.htm . This pattern-based study provides a deeper understanding of taxon-specific discriminating patterns in 16S rRNA gene with respect to taxonomic classification. PMID:27104769

  7. Patterns of dental development in Homo, Australopithecus, Pan, and Gorilla.

    PubMed

    Smith, B H

    1994-07-01

    Smith ([1986] Nature 323:327-330) distinguished patterns of development of teeth of juvenile fossil hominids as being "more like humans" or "more like apes" based on statistical similarity to group standards. Here, this central tendency discrimination (CTD) is tested for its ability to recognize ape and human patterns of dental development in 789 subadult hominoids. Tooth development of a modern human sample (665 black southern Africans) was scored entirely by an outside investigator; pongid and fossil hominid samples (59 Pan, 50 Gorilla, and 14 fossil hominids) were scored by the author. The claim of Lampl et al. ([1993] Am. J. Phys. Anthropol. 90:113-127) that Smith's 1986 method succeeds in only 8% of human cases was not sustained. Figures for overall success of classification (87% humans, 68% apes) mask important effects of teeth sampled and age class. For humans, the power of CTD varied between 53% and 92% depending on the number and kind of teeth available--nearly that of a coin toss when data described only two nearby teeth, but quite successful with more teeth or distant teeth. For apes, only age class affected accuracy: "Infant" apes (M1 development < or = root cleft complete, unemerged) were usually classed as humans, probably because the present developmental standard for great apes is in substantial error under 3 years of age. "Juvenile" apes (M1 > or = root 1/4), however, were correctly discriminated in 87% of cases. Overall, CTD can be considered reliable (accuracy of 92% for humans and 88% for apes) when data contrast development of distant dental fields and subjects are juveniles (not infants). Restricting analysis of fossils to specimens satisfying these criteria, patterns of dental development of gracile australopithecines and Homo habilis remain classified with African apes. Those of Homo erectus and Neanderthals are classified with humans, suggesting that patterns of growth evolved substantially in the Hominidae. To standardize future research

  8. SOM-based Pattern Generator: Pattern Generation Based on the Backward Projection in a Self-Organizing Map and Its Applications

    NASA Astrophysics Data System (ADS)

    Wakuya, Hiroshi; Ishiguma, Takahiro

    A major feature of the self-organizing map (SOM) is a topology-preserving projection from the input layer to the competitive layer, and it has been used mainly as an analytical tool for discovering underlying rules in the given data set. Even though recent splendid progress in this area, there are few novel ideas to break such a conventional style. On the contrary, based on its distinctive nature, a new method for generating patterns through backward projection from the competitive layer to the input layer is proposed recently. Moreover, a promising technology for producing animation as a series of backward-projected patterns along with any pathways on the competitive layer is presented. Then, in order to carry out further considerations, some computer simulations with a variety of posed stick figures are tried in this paper. After training, four kinds of pathways, which correspond to different movements such as dancing, exercising and walking, are prepared. Though some of them does not contain any training samples, all of them worked well as we have intended in advance. As a result, it is found that the proposed method shows good performance and it is also confirmed its effectiveness.

  9. Biological pattern generation: the cellular and computational logic of networks in motion.

    PubMed

    Grillner, Sten

    2006-12-01

    In 1900, Ramón y Cajal advanced the neuron doctrine, defining the neuron as the fundamental signaling unit of the nervous system. Over a century later, neurobiologists address the circuit doctrine: the logic of the core units of neuronal circuitry that control animal behavior. These are circuits that can be called into action for perceptual, conceptual, and motor tasks, and we now need to understand whether there are coherent and overriding principles that govern the design and function of these modules. The discovery of central motor programs has provided crucial insight into the logic of one prototypic set of neural circuits: those that generate motor patterns. In this review, I discuss the mode of operation of these pattern generator networks and consider the neural mechanisms through which they are selected and activated. In addition, I will outline the utility of computational models in analysis of the dynamic actions of these motor networks. PMID:17145498

  10. Experimental observation of multistability and dynamic attractors in silicon central pattern generators

    NASA Astrophysics Data System (ADS)

    Zhao, Le; Nogaret, Alain

    2015-11-01

    We report on the multistability of chaotic networks of silicon neurons and demonstrate how spatiotemporal sequences of voltage oscillations are selected with timed current stimuli. A three neuron central pattern generator was built by interconnecting Hodgkin-Huxley neurons with mutually inhibitory links mimicking gap junctions. By systematically varying the timing of current stimuli applied to individual neurons, we generate the phase lag maps of neuronal oscillators and study their dependence on the network connectivity. We identify up to six attractors consisting of triphasic sequences of unevenly spaced pulses propagating clockwise and anticlockwise. While confirming theoretical predictions, our experiments reveal more complex oscillatory patterns shaped by the ratio of the pulse width to the oscillation period. Our work contributes to validating the command neuron hypothesis.

  11. Photorefractive holographic moiré-like patterns for secure numerical code generation.

    PubMed

    de Oliveira, G N; Oliveira, M E; dos Santos, P A M

    2013-03-15

    In this Letter, low-frequency photorefractive holographic moiré fringe patterns are proposed as secure numerical code generators that could be useful for storage or data transmission. These dynamic moiré patterns are holographically obtained by the superposition of two or more sinusoidal gratings with slightly different pitches. The Bi(12)TiO(20) photorefractive crystal sample is used as holographic medium. An optical numerical base was defined with patterns representing the 0, 1 and -1 digits as bits. Then, the complete set of these optical bits is combined to form bytes, where a numerical sequence is represented. The results show that the proposed numerical code is simple, robust and extremely secure, then could be used efficiently as standard numerical identification in robotic vision or eventually in storage or transmission of secure numerical data. PMID:23503288

  12. Ultrastructure of stomatal development in early-divergent angiosperms reveals contrasting patterning and pre-patterning

    PubMed Central

    Rudall, Paula J.; Knowles, Emma V. W.

    2013-01-01

    Background and Aims Angiosperm stomata consistently possess a pair of guard cells, but differ between taxa in the patterning and developmental origin of neighbour cells. Developmental studies of phylogenetically pivotal taxa are essential as comparative yardsticks for understanding the evolution of stomatal development. Methods We present a novel ultrastructural study of developing stomata in leaves of Amborella (Amborellales), Nymphaea and Cabomba (Nymphaeales), and Austrobaileya and Schisandra (Austrobaileyales), representing the three earliest-divergent lineages of extant angiosperms (the ANITA-grade). Key Results Alternative developmental pathways occur in early-divergent angiosperms, resulting partly from differences in pre-patterning and partly from the presence or absence of highly polarized (asymmetric) mitoses in the stomatal cell lineage. Amplifying divisions are absent from ANITA-grade taxa, indicating that ostensible similarities with the stomatal patterning of Arabidopsis are superficial. In Amborella, ‘squared’ pre-patterning occurs in intercostal regions, with groups of four protodermal cells typically arranged in a rectangle; most guard-mother cells are formed by asymmetric division of a precursor cell (the mesoperigenous condition) and are typically triangular or trapezoidal. In contrast, water-lily stomata are always perigenous (lacking asymmetric divisions). Austrobaileya has occasional ‘giant’ stomata. Conclusions Similar mature stomatal phenotypes can result from contrasting morphogenetic factors, although the results suggest that paracytic stomata are invariably the product of at least one asymmetric division. Loss of asymmetric divisions in stomatal development could be a significant factor in land plant evolution, with implications for the diversity of key structural and physiological pathways. PMID:23969762

  13. Phase relationships between segmentally organized oscillators in the leech heartbeat pattern generating network.

    PubMed

    Masino, Mark A; Calabrese, Ronald L

    2002-03-01

    Motor pattern generating networks that produce segmentally distributed motor outflow are often portrayed as a series of coupled segmental oscillators that produce a regular progression (constant phase differences) in their rhythmic activity. The leech heartbeat central pattern generator is paced by a core timing network, which consists of two coupled segmental oscillators in segmental ganglia 3 and 4. The segmental oscillators comprise paired mutually inhibitory oscillator interneurons and the processes of intersegmental coordinating interneurons. As a first step in understanding the coordination of segmental motor outflow by this pattern generator, we describe the functional synaptic interactions, and activity and phase relationships of the heart interneurons of the timing network, in isolated nerve cord preparations. In the timing network, most (approximately 75%) of the coordinating interneuron action potentials were generated at a primary spike initiation site located in ganglion 4 (G4). A secondary spike initiation site in ganglion 3 (G3) became active in the absence of activity at the primary site. Generally, the secondary site was characterized by a reluctance to burst and a lower spike frequency, when compared with the primary site. Oscillator interneurons in G3 inhibited spike activity at both initiation sites, whereas oscillator interneurons in G4 inhibited spike activity only at the primary initiation site. This asymmetry in the control of spike activity in the coordinating interneurons may account for the observation that the phase of the coordinating interneurons is more tightly linked to the G3 than G4 oscillator interneurons. The cycle period of the timing network and the phase difference between the ipsilateral G3 and G4 oscillator interneurons were regular within individual preparations, but varied among preparations. This variation in phase differences observed across preparations implies that modulated intrinsic membrane and synaptic properties

  14. NEURONAL ACTION ON THE DEVELOPING BLOOD VESSEL PATTERN

    PubMed Central

    James, Jennifer M.; Mukouyama, Yoh-suke

    2011-01-01

    The nervous system relies on a highly specialized network of blood vessels for development and neuronal survival. Recent evidence suggests that both the central and peripheral nervous systems (CNS and PNS) employ multiple mechanisms to shape the vascular tree to meet its specific metabolic demands, such as promoting nerve-artery alignment in the PNS or the development the blood brain barrier in the CNS. In this article we discuss how the nervous system directly influences blood vessel patterning resulting in neuro-vascular congruence that is maintained throughout development and in the adult. PMID:21978864

  15. Development of Next Generation Multiphase Pipe Flow Prediction Tools

    SciTech Connect

    Tulsa Fluid Flow

    2008-08-31

    closure relation development for different flow conditions. Modeling studies were performed in two parts, Technology Assessment and Model Development and Enhancement. The results of the Technology assessment study indicated that the performance of the current state of the art two-phase flow models was poor especially for three-phase pipeline flow when compared with the existing data. As part of the model development and enhancement study, a new unified model for gas-oil-water three-phase pipe flow was developed. The new model is based on the dynamics of slug flow, which shares transition boundaries with all the other flow patterns. The equations of slug flow are used not only to calculate the slug characteristics, but also to predict transitions from slug flow to other flow patterns. An experimental program including three-phase gas-oil-water horizontal flow and two-phase horizontal and inclined oil-water flow testing was conducted utilizing a Tulsa University Fluid Flow Projects Three-phase Flow Facility. The experimental results were incorporated into the unified model as they became available, and model results were used to better focus and tailor the experimental study. Finally, during the Period 2, a new three-phase databank has been developed using the data generated during this project and additional data available in the literature. The unified model to predict the gas-oil-water three phase flow characteristics was tested by comparing the prediction results with the data. The results showed good agreements.

  16. Advance crew procedures development techniques: Procedures generation program requirements document

    NASA Technical Reports Server (NTRS)

    Arbet, J. D.; Benbow, R. L.; Hawk, M. L.

    1974-01-01

    The Procedures Generation Program (PGP) is described as an automated crew procedures generation and performance monitoring system. Computer software requirements to be implemented in PGP for the Advanced Crew Procedures Development Techniques are outlined.

  17. Towards pattern generation and chaotic series prediction with photonic reservoir computers

    NASA Astrophysics Data System (ADS)

    Antonik, Piotr; Hermans, Michiel; Duport, François; Haelterman, Marc; Massar, Serge

    2016-03-01

    Reservoir Computing is a bio-inspired computing paradigm for processing time dependent signals that is particularly well suited for analog implementations. Our team has demonstrated several photonic reservoir computers with performance comparable to digital algorithms on a series of benchmark tasks such as channel equalisation and speech recognition. Recently, we showed that our opto-electronic reservoir computer could be trained online with a simple gradient descent algorithm programmed on an FPGA chip. This setup makes it in principle possible to feed the output signal back into the reservoir, and thus highly enrich the dynamics of the system. This will allow to tackle complex prediction tasks in hardware, such as pattern generation and chaotic and financial series prediction, which have so far only been studied in digital implementations. Here we report simulation results of our opto-electronic setup with an FPGA chip and output feedback applied to pattern generation and Mackey-Glass chaotic series prediction. The simulations take into account the major aspects of our experimental setup. We find that pattern generation can be easily implemented on the current setup with very good results. The Mackey-Glass series prediction task is more complex and requires a large reservoir and more elaborate training algorithm. With these adjustments promising result are obtained, and we now know what improvements are needed to match previously reported numerical results. These simulation results will serve as basis of comparison for experiments we will carry out in the coming months.

  18. Removal of spike frequency adaptation via neuromodulation intrinsic to the Tritonia escape swim central pattern generator.

    PubMed

    Katz, P S; Frost, W N

    1997-10-15

    For the mollusc Tritonia diomedea to generate its escape swim motor pattern, interneuron C2, a crucial member of the central pattern generator (CPG) for this rhythmic behavior, must fire repetitive bursts of action potentials. Yet, before swimming, repeated depolarizing current pulses injected into C2 at periods similar those in the swim motor program are incapable of mimicking the firing rate attained by C2 on each cycle of a swim motor program. This resting level of C2 inexcitability is attributable to its own inherent spike frequency adaptation (SFA). Clearly, this property must be altered for the swim behavior to occur. The pathway for initiation of the swimming behavior involves activation of the serotonergic dorsal swim interneurons (DSIs), which are also intrinsic members of the swim CPG. Physiologically appropriate DSI stimulation transiently decreases C2 SFA, allowing C2 to fire at higher rates even when repeatedly depolarized at short intervals. The increased C2 excitability caused by DSI stimulation is mimicked and occluded by serotonin application. Furthermore, the change in excitability is not caused by the depolarization associated with DSI stimulation or serotonin application but is correlated with a decrease in C2 spike afterhyperpolarization. This suggests that the DSIs use serotonin to evoke a neuromodulatory action on a conductance in C2 that regulates its firing rate. This modulatory action of one CPG neuron on another is likely to play a role in configuring the swim circuit into its rhythmic pattern-generating mode and maintaining it in that state. PMID:9315892

  19. From spinal central pattern generators to cortical network: integrated BCI for walking rehabilitation.

    PubMed

    Cheron, G; Duvinage, M; De Saedeleer, C; Castermans, T; Bengoetxea, A; Petieau, M; Seetharaman, K; Hoellinger, T; Dan, B; Dutoit, T; Sylos Labini, F; Lacquaniti, F; Ivanenko, Y

    2012-01-01

    Success in locomotor rehabilitation programs can be improved with the use of brain-computer interfaces (BCIs). Although a wealth of research has demonstrated that locomotion is largely controlled by spinal mechanisms, the brain is of utmost importance in monitoring locomotor patterns and therefore contains information regarding central pattern generation functioning. In addition, there is also a tight coordination between the upper and lower limbs, which can also be useful in controlling locomotion. The current paper critically investigates different approaches that are applicable to this field: the use of electroencephalogram (EEG), upper limb electromyogram (EMG), or a hybrid of the two neurophysiological signals to control assistive exoskeletons used in locomotion based on programmable central pattern generators (PCPGs) or dynamic recurrent neural networks (DRNNs). Plantar surface tactile stimulation devices combined with virtual reality may provide the sensation of walking while in a supine position for use of training brain signals generated during locomotion. These methods may exploit mechanisms of brain plasticity and assist in the neurorehabilitation of gait in a variety of clinical conditions, including stroke, spinal trauma, multiple sclerosis, and cerebral palsy. PMID:22272380

  20. Imaging patterns of brain development and their relationship to cognition.

    PubMed

    Erus, Guray; Battapady, Harsha; Satterthwaite, Theodore D; Hakonarson, Hakon; Gur, Raquel E; Davatzikos, Christos; Gur, Ruben C

    2015-06-01

    We present a brain development index (BDI) that concisely summarizes complex imaging patterns of structural brain maturation along a single dimension using a machine learning methodology. The brain was found to follow a remarkably consistent developmental trajectory in a sample of 621 subjects of ages 8-22 participating in the Philadelphia Neurodevelopmental Cohort, reflected by a cross-validated correlation coefficient between chronologic age and the BDI of r = 0.89. Critically, deviations from this trajectory related to cognitive performance. Specifically, subjects whose BDI was higher than their chronological age displayed significantly superior cognitive processing speed compared with subjects whose BDI was lower than their actual age. These results indicate that the multiparametric imaging patterns summarized by the BDI can accurately delineate trajectories of brain development and identify individuals with cognitive precocity or delay. PMID:24421175

  1. A plausible mechanism for auxin patterning along the developing root

    PubMed Central

    2010-01-01

    Background In plant roots, auxin is critical for patterning and morphogenesis. It regulates cell elongation and division, the development and maintenance of root apical meristems, and other processes. In Arabidopsis, auxin distribution along the central root axis has several maxima: in the root tip, in the basal meristem and at the shoot/root junction. The distal maximum in the root tip maintains the stem cell niche. Proximal maxima may trigger lateral or adventitious root initiation. Results We propose a reflected flow mechanism for the formation of the auxin maximum in the root apical meristem. The mechanism is based on auxin's known activation and inhibition of expressed PIN family auxin carriers at low and high auxin levels, respectively. Simulations showed that these regulatory interactions are sufficient for self-organization of the auxin distribution pattern along the central root axis under varying conditions. The mathematical model was extended with rules for discontinuous cell dynamics so that cell divisions were also governed by auxin, and by another morphogen Division Factor which combines the actions of cytokinin and ethylene on cell division in the root. The positional information specified by the gradients of these two morphogens is able to explain root patterning along the central root axis. Conclusion We present here a plausible mechanism for auxin patterning along the developing root, that may provide for self-organization of the distal auxin maximum when the reverse fountain has not yet been formed or has been disrupted. In addition, the proximal maxima are formed under the reflected flow mechanism in response to periods of increasing auxin flow from the growing shoot. These events may predetermine lateral root initiation in a rhyzotactic pattern. Another outcome of the reflected flow mechanism - the predominance of lateral or adventitious roots in different plant species - may be based on the different efficiencies with which auxin inhibits its

  2. Etanercept responsive acrodermatitis continua of Hallopeau: is a pattern developing?

    PubMed

    Bonish, Brian; Rashid, Rashid M; Swan, James

    2006-10-01

    Acrodermatitis continua of Hallopeau (ACH) is a rare disease. Little is known about its etiology or relative effectiveness of the various therapeutic approaches. However, in the literature a pattern seems to be developing on successfully treated patients using biologic therapies. Here, we further emphasize the potential breakthrough presented by the novel immune based therapies. This report consists of a case of etanercept responsive ACH along with a brief review of the literature. PMID:17039659

  3. Health Care Waste generation rates and patterns: The case of Lebanon.

    PubMed

    Maamari, Olivia; Brandam, Cedric; Lteif, Roger; Salameh, Dominique

    2015-09-01

    The objective of this study is to analyze Infectious Health Care Waste generation rates and patterns in Lebanon. Therefore, the quantities generated during five years by 57 hospitals from a total of 163 in the country have been analyzed. The seasonal evolution of Infectious Health Care Waste production and the evolution of the evaluation of the trends over years have been studied. Besides, the generation per capita have been estimated and compared to other countries. The variance between categories and the correlation between number of beds and Infectious Health Care Waste generation have been analyzed. The obtained results showed that the large private hospitals (over 200 beds) are characterized by their high generation rate: an average of 2.45kg per occupied bed(-1)day(-1), whereas the average generation rate for other categories is 0.94kg per occupied bed(-1)day(-1). The weighted mean is 1.14 per occupied kgbed(-1)day(-1). Small public hospitals (i.e. less than 100 beds) have the smallest standard deviation: 0.13, whereas large private hospitals (i.e. over than 200 beds) have the highest standard deviation: 0.40. Infectious Health Care Waste generation has been estimated to 1.42kg/capita/year. The correlation between the numbers of hospitals beds in hospitals and the generation rate per bed is weak. The correlation between Infectious Health Care Waste generation per day and beds number is stronger. The total quantity produced by hospitals has increased over the five past years. These results suggest that the quantities of medical waste are not well controlled, and that hospitals have a defective monitoring management system of their waste. Annual peaks are observed in June, July, and December. Thus, this study, for the first time in Lebanon, has provided information on the infectious waste generation, allowing benchmarking between hospitals and between countries. PMID:26049204

  4. Control strategies of 3-cell Central Pattern Generator via global stimuli

    PubMed Central

    Lozano, Álvaro; Rodríguez, Marcos; Barrio, Roberto

    2016-01-01

    The study of the synchronization patterns of small neuron networks that control several biological processes has become an interesting growing discipline. Some of these synchronization patterns of individual neurons are related to some undesirable neurological diseases, and they are believed to play a crucial role in the emergence of pathological rhythmic brain activity in different diseases, like Parkinson’s disease. We show how, with a suitable combination of short and weak global inhibitory and excitatory stimuli over the whole network, we can switch between different stable bursting patterns in small neuron networks (in our case a 3-neuron network). We develop a systematic study showing and explaining the effects of applying the pulses at different moments. Moreover, we compare the technique on a completely symmetric network and on a slightly perturbed one (a much more realistic situation). The present approach of using global stimuli may allow to avoid undesirable synchronization patterns with nonaggressive stimuli. PMID:27021970

  5. Control strategies of 3-cell Central Pattern Generator via global stimuli

    NASA Astrophysics Data System (ADS)

    Lozano, Álvaro; Rodríguez, Marcos; Barrio, Roberto

    2016-03-01

    The study of the synchronization patterns of small neuron networks that control several biological processes has become an interesting growing discipline. Some of these synchronization patterns of individual neurons are related to some undesirable neurological diseases, and they are believed to play a crucial role in the emergence of pathological rhythmic brain activity in different diseases, like Parkinson’s disease. We show how, with a suitable combination of short and weak global inhibitory and excitatory stimuli over the whole network, we can switch between different stable bursting patterns in small neuron networks (in our case a 3-neuron network). We develop a systematic study showing and explaining the effects of applying the pulses at different moments. Moreover, we compare the technique on a completely symmetric network and on a slightly perturbed one (a much more realistic situation). The present approach of using global stimuli may allow to avoid undesirable synchronization patterns with nonaggressive stimuli.

  6. Plant development. Integration of growth and patterning during vascular tissue formation in Arabidopsis.

    PubMed

    De Rybel, Bert; Adibi, Milad; Breda, Alice S; Wendrich, Jos R; Smit, Margot E; Novák, Ondřej; Yamaguchi, Nobutoshi; Yoshida, Saiko; Van Isterdael, Gert; Palovaara, Joakim; Nijsse, Bart; Boekschoten, Mark V; Hooiveld, Guido; Beeckman, Tom; Wagner, Doris; Ljung, Karin; Fleck, Christian; Weijers, Dolf

    2014-08-01

    Coordination of cell division and pattern formation is central to tissue and organ development, particularly in plants where walls prevent cell migration. Auxin and cytokinin are both critical for division and patterning, but it is unknown how these hormones converge upon tissue development. We identify a genetic network that reinforces an early embryonic bias in auxin distribution to create a local, nonresponding cytokinin source within the root vascular tissue. Experimental and theoretical evidence shows that these cells act as a tissue organizer by positioning the domain of oriented cell divisions. We further demonstrate that the auxin-cytokinin interaction acts as a spatial incoherent feed-forward loop, which is essential to generate distinct hormonal response zones, thus establishing a stable pattern within a growing vascular tissue. PMID:25104393

  7. Design and development of thermoelectric generator

    SciTech Connect

    Prem Kumar, D. S. Mahajan, Ishan Vardhan Anbalagan, R. Mallik, Ramesh Chandra

    2014-04-24

    In this paper we discuss the fabrication, working and characteristics of a thermoelectric generator made up of p and n type semiconductor materials. The device consists of Fe{sub 0.2}Co{sub 3.8}Sb{sub 11.5}Te{sub 0.5} (zT = 1.04 at 818 K) as the n-type and Zn4Sb3 (zT=0.8 at 550 K) as the p-type material synthesized by vacuum hot press method. Carbon paste has been used to join the semiconductor legs to metal (Molybdenum) electrodes to reduce the contact resistance. The multi-couple (4 legs) generator results a maximum output power of 1.083 mW at a temperature difference of 240 K between the hot and cold sides. In this investigation, an I-V characteristic, maximum output power of the thermoelectric module is presented. The efficiency of thermoelectric module is obtained as η = 0.273 %.

  8. Development of walking pattern evaluation system for hypogravity simulation.

    PubMed

    Leães, R; Cambraia, R; Bacim, F; Dalmarco, G; Calder, A; De Azevedo, D F G; Pinho, M; Russomano, T

    2006-01-01

    This study aimed to develop a Walking Pattern Evaluation System during Hypogravity Simulation (SAMSH), which included the adaptation of a body suspension device, the instrumentation of a treadmill and the development of a virtual environment. SAMSH was developed using one subject. Kinematic analyses were performed whilst one individual was walking on the treadmill during body weight reduction simulating the gravitational forces of the Moon (reduction of 60%) and Mars (reduction of 30%) with and without virtual reality glasses (Head Mounted Display, HMD). The walking pattern was evaluated by means of knee and ankle electrogoniometers, foot switches placed on the front and back part of the plantar region, and five video cameras. Results showed that the body weight reduction during Moon simulation alter the walking pattern, including the increase in step time, contact time, step length and aerial time, and the decrease of walking cadence time (steps per minute). The findings of this study also suggested that hypogravity simulation reduces walking effort. The utilization of the HMD allowed the evaluation of the head position three-dimensionally during hypogravity simulation. The virtual environment reduced postural balance, due to the absence of visual input, which was evidenced by a protective extension reaction. PMID:17947187

  9. The importance of structured noise in the generation of self-organizing tissue patterns through contact-mediated cell–cell signalling

    PubMed Central

    Cohen, Michael; Baum, Buzz; Miodownik, Mark

    2011-01-01

    Lateral inhibition provides the basis for a self-organizing patterning system in which distinct cell states emerge from an otherwise uniform field of cells. The development of the microchaete bristle pattern on the notum of the fruitfly, Drosophila melanogaster, has long served as a popular model of this process. We recently showed that this bristle pattern depends upon a population of dynamic, basal actin-based filopodia, which span multiple cell diameters. These protrusions establish transient signalling contacts between non-neighbouring cells, generating a type of structured noise that helps to yield a well-ordered and spaced pattern of bristles. Here, we develop a general model of protrusion-based patterning to analyse the role of noise in this process. Using a simple asynchronous cellular automata rule-based model we show that this type of structured noise drives the gradual refinement of lateral inhibition-mediated patterning, as the system moves towards a stable configuration in which cells expressing the inhibitory signal are near-optimally packed. By analysing the effects of introducing thresholds required for signal detection in this model of lateral inhibition, our study shows how filopodia-mediated cell–cell communication can generate complex patterns of spots and stripes, which, in the presence of signalling noise, align themselves across a patterning field. Thus, intermittent protrusion-based signalling has the potential to yield robust self-organizing tissue-wide patterns without the need to invoke diffusion-mediated signalling. PMID:21084342

  10. Familial bias and auditory feedback regulation of vocal babbling patterns during early song development

    PubMed Central

    Sato, Daisuke; Mori, Chihiro; Sawai, Azusa; Wada, Kazuhiro

    2016-01-01

    Learned vocalizations are a crucial acoustic biosignal conveying individual traits in many species. Songbirds learn song patterns by listening to a tutor song and performing vocal practice during a sensitive developmental period. However, when and how individual differences in song patterns develop remain unknown. Here, we report that individual differences in vocal output exist even at the earliest song development stage, called subsong. Experiments involving the manipulation of both breeding pairs and song tutoring conditions revealed that the parental pair combination contributes to generating familial differences in syllable duration and variability in the subsong of offspring. Furthermore, after deafening, juveniles immediately changed their subsong by shortening the syllable durations but maintained the individual variability of their subsong temporal patterns, suggesting both auditory-sensitive modification and independent intrinsic regulation of vocal output. These results indicate that the temporal patterns of subsong are not merely disordered vocalization but are regulated by familial bias with sensitivity to auditory feedback, thus generating individual variability at the initiation of vocal development. PMID:27444993

  11. Familial bias and auditory feedback regulation of vocal babbling patterns during early song development.

    PubMed

    Sato, Daisuke; Mori, Chihiro; Sawai, Azusa; Wada, Kazuhiro

    2016-01-01

    Learned vocalizations are a crucial acoustic biosignal conveying individual traits in many species. Songbirds learn song patterns by listening to a tutor song and performing vocal practice during a sensitive developmental period. However, when and how individual differences in song patterns develop remain unknown. Here, we report that individual differences in vocal output exist even at the earliest song development stage, called subsong. Experiments involving the manipulation of both breeding pairs and song tutoring conditions revealed that the parental pair combination contributes to generating familial differences in syllable duration and variability in the subsong of offspring. Furthermore, after deafening, juveniles immediately changed their subsong by shortening the syllable durations but maintained the individual variability of their subsong temporal patterns, suggesting both auditory-sensitive modification and independent intrinsic regulation of vocal output. These results indicate that the temporal patterns of subsong are not merely disordered vocalization but are regulated by familial bias with sensitivity to auditory feedback, thus generating individual variability at the initiation of vocal development. PMID:27444993

  12. Geometric Morphometrics on Gene Expression Patterns Within Phenotypes: A Case Example on Limb Development

    PubMed Central

    Martínez-Abadías, Neus; Mateu, Roger; Niksic, Martina; Russo, Lucia; Sharpe, James

    2016-01-01

    How the genotype translates into the phenotype through development is critical to fully understand the evolution of phenotypes. We propose a novel approach to directly assess how changes in gene expression patterns are associated with changes in morphology using the limb as a case example. Our method combines molecular biology techniques, such as whole-mount in situ hybridization, with image and shape analysis, extending the use of Geometric Morphometrics to the analysis of nonanatomical shapes, such as gene expression domains. Elliptical Fourier and Procrustes-based semilandmark analyses were used to analyze the variation and covariation patterns of the limb bud shape with the expression patterns of two relevant genes for limb morphogenesis, Hoxa11 and Hoxa13. We devised a multiple thresholding method to semiautomatically segment gene domains at several expression levels in large samples of limb buds from C57Bl6 mouse embryos between 10 and 12 postfertilization days. Besides providing an accurate phenotyping tool to quantify the spatiotemporal dynamics of gene expression patterns within developing structures, our morphometric analyses revealed high, non-random, and gene-specific variation undergoing canalization during limb development. Our results demonstrate that Hoxa11 and Hoxa13, despite being paralogs with analogous functions in limb patterning, show clearly distinct dynamic patterns, both in shape and size, and are associated differently with the limb bud shape. The correspondence between our results and already well-established molecular processes underlying limb development confirms that this morphometric approach is a powerful tool to extract features of development regulating morphogenesis. Such multilevel analyses are promising in systems where not so much molecular information is available and will advance our understanding of the genotype–phenotype map. In systematics, this knowledge will increase our ability to infer how evolution modified a common

  13. Geometric Morphometrics on Gene Expression Patterns Within Phenotypes: A Case Example on Limb Development.

    PubMed

    Martínez-Abadías, Neus; Mateu, Roger; Niksic, Martina; Russo, Lucia; Sharpe, James

    2016-03-01

    How the genotype translates into the phenotype through development is critical to fully understand the evolution of phenotypes. We propose a novel approach to directly assess how changes in gene expression patterns are associated with changes in morphology using the limb as a case example. Our method combines molecular biology techniques, such as whole-mount in situ hybridization, with image and shape analysis, extending the use of Geometric Morphometrics to the analysis of nonanatomical shapes, such as gene expression domains. Elliptical Fourier and Procrustes-based semilandmark analyses were used to analyze the variation and covariation patterns of the limb bud shape with the expression patterns of two relevant genes for limb morphogenesis, Hoxa11 and Hoxa13. We devised a multiple thresholding method to semiautomatically segment gene domains at several expression levels in large samples of limb buds from C57Bl6 mouse embryos between 10 and 12 postfertilization days. Besides providing an accurate phenotyping tool to quantify the spatiotemporal dynamics of gene expression patterns within developing structures, our morphometric analyses revealed high, non-random, and gene-specific variation undergoing canalization during limb development. Our results demonstrate that Hoxa11 and Hoxa13, despite being paralogs with analogous functions in limb patterning, show clearly distinct dynamic patterns, both in shape and size, and are associated differently with the limb bud shape. The correspondence between our results and already well-established molecular processes underlying limb development confirms that this morphometric approach is a powerful tool to extract features of development regulating morphogenesis. Such multilevel analyses are promising in systems where not so much molecular information is available and will advance our understanding of the genotype-phenotype map. In systematics, this knowledge will increase our ability to infer how evolution modified a common

  14. Generation, Language, Body Mass Index, and Activity Patterns in Hispanic Children

    PubMed Central

    Taverno, Sharon E.; Rollins, Brandi Y.; Francis, Lori A.

    2010-01-01

    Background The acculturation hypothesis proposes an overall disadvantage in health outcomes for Hispanic immigrants with more time spent living in the U.S., but little is known about how generational status and language may influence Hispanic children’s relative weight and activity patterns. Purpose The association between generation and language was investigated with relative weight (BMI z-scores), physical activity, screen time, and participation in extracurricular activities (e.g., sports, clubs) in a U.S.-based, nationally representative sample of Hispanic children. Methods Participants included 2,012 Hispanic children aged 6–11 years from the cross-sectional, 2003 National Survey of Children’s Health. Children were grouped according to generational status (1st, 2nd or 3rd), and the primary language spoken in the home (English vs non-English). Primary analyses included adjusted logistic and multinomial logistic regression to examine the relationships among variables; all analyses were conducted between 2008 and 2009. Results Compared to 3rd generation, English speakers, 1st and 2nd generation, non-English speakers were over two times more likely to be obese. Moreover, 1st generation, non-English speakers were half as likely to engage in regular physical activity and sports. Both 1st and 2nd generation, non-English speakers were less likely to participate in clubs compared to 2nd and 3rd generation, English speakers. Overall, all non–English speaking groups reported less screen time compared to 3rd generation, English speakers. Conclusions The hypothesis that Hispanics lose their health protection with more time spent in the U.S. was not supported in this sample of Hispanic children. PMID:20117570

  15. Cellular and Muscular Growth Patterns During Sipunculan Development

    PubMed Central

    KRISTOF, ALEN; WOLLESEN, TIM; MAIOROVA, ANASTASSYA S.; WANNINGER, ANDREAS

    2015-01-01

    Sipuncula is a lophotrochozoan taxon with annelid affinities, albeit lacking segmentation of the adult body. Here, we present data on cell proliferation and myogenesis during development of three sipunculan species, Phascolosoma agassizii, Thysanocardia nigra, and Themiste pyroides. The first anlagen of the circular body wall muscles appear simultaneously and not subsequently as in the annelids. At the same time, the rudiments of four longitudinal retractor muscles appear. This supports the notion that four introvert retractors were part of the ancestral sipunculan bodyplan. The longitudinal muscle fibers form a pattern of densely arranged fibers around the retractor muscles, indicating that the latter evolved from modified longitudinal body wall muscles. For a short time interval, the distribution of S-phase mitotic cells shows a metameric pattern in the developing ventral nerve cord during the pelagosphera stage. This pattern disappears close to metamorphic competence. Our findings are congruent with data on sipunculan neurogenesis, as well as with recent molecular analyses that place Sipuncula within Annelida, and thus strongly support a segmental ancestry of Sipuncula. PMID:21246707

  16. Developing the next generation of nurse scientists.

    PubMed

    Burkhart, Patricia V; Hall, Lynne A

    2015-01-01

    This article describes an undergraduate nursing research internship program in which students are engaged in research with a faculty mentor. Since 2002, more than 130 undergraduate nursing students have participated. Interns coauthored publications, presented papers and posters at conferences, and received awards. This highly successful program provides a model that can be easily replicated to foster the development of future nurse scientists. PMID:25581434

  17. ZERO EMISSION POWER GENERATION TECHNOLOGY DEVELOPMENT

    SciTech Connect

    Ronald Bischoff; Stephen Doyle

    2005-01-20

    Clean Energy Systems (CES) was previously funded by DOE's ''Vision 21'' program. This program provided a proof-of-concept demonstration that CES' novel gas generator (combustor) enabled production of electrical power from fossil fuels without pollution. CES has used current DOE funding for additional design study exercises which established the utility of the CES-cycle for retrofitting existing power plants for zero-emission operations and for incorporation in zero-emission, ''green field'' power plant concepts. DOE funding also helped define the suitability of existing steam turbine designs for use in the CES-cycle and explored the use of aero-derivative turbines for advanced power plant designs. This work is of interest to the California Energy Commission (CEC) and the Norwegian Ministry of Petroleum & Energy. California's air quality districts have significant non-attainment areas in which CES technology can help. CEC is currently funding a CES-cycle technology demonstration near Bakersfield, CA. The Norwegian government is supporting conceptual studies for a proposed 40 MW zero-emission power plant in Stavager, Norway which would use the CES-cycle. The latter project is called Zero-Emission Norwegian Gas (ZENG). In summary, current engineering studies: (1) supported engineering design of plant subsystems applicable for use with CES-cycle zero-emission power plants, and (2) documented the suitability and availability of steam turbines for use in CES-cycle power plants, with particular relevance to the Norwegian ZENG Project.

  18. D-D neutron generator development at LBNL.

    PubMed

    Reijonen, J; Gicquel, F; Hahto, S K; King, M; Lou, T-P; Leung, K-N

    2005-01-01

    The plasma and ion source technology group in Lawrence Berkeley National Laboratory is developing advanced, next generation D-D neutron generators. There are three distinctive developments, which are discussed in this presentation, namely, multi-stage, accelerator-based axial neutron generator, high-output co-axial neutron generator and point source neutron generator. These generators employ RF-induction discharge to produce deuterium ions. The distinctive feature of RF-discharge is its capability to generate high atomic hydrogen species, high current densities and stable and long-life operation. The axial neutron generator is designed for applications that require fast pulsing together with medium to high D-D neutron output. The co-axial neutron generator is aimed for high neutron output with cw or pulsed operation, using either the D-D or D-T fusion reaction. The point source neutron generator is a new concept, utilizing a toroidal-shaped plasma generator. The beam is extracted from multiple apertures and focus to the target tube, which is located at the middle of the generator. This will generate a point source of D-D, T-T or D-T neutrons with high output flux. The latest development together with measured data will be discussed in this article. PMID:15975804

  19. Forest stand development patterns in the southern Appalachians

    SciTech Connect

    Copenheaver, C.A.; Matthews, J.M.; Showalter, J.M.; Auch, W.E.

    2006-07-01

    Composition of southern Appalachian forests are influenced by disturbance and topography. This study examined six stands in southwestern Virginia. Within each stand, a 0.3-ha plot was established, and all trees and saplings were measured and aged. Burned stands had lower densities of saplings and small trees, but appeared to have greater Quercus regeneration. Ice damage from the 1994 ice storm was most evident in Pinus strobus saplings. A stand on old coal-mine slag appeared to be experiencing a slower rate of succession than other sites. A variety of stand development patterns were observed, but one common pattern was that oak-hickory overstories had different species in their understory, which may indicate future changes in species composition.

  20. Career Development in Generation X. Myths and Realities.

    ERIC Educational Resources Information Center

    Lankard, Bettina A.

    Several myths relate to the question of whether Generation X, the population cohort following the Baby Boomers, has different values, work ethics, and attitudes toward work and career development. The first myth is that individuals in Generation X are slackers, lacking career drive and ambition. The reality is that Generation X may just view the…

  1. Coupled chaotic oscillators and their relation to a central pattern generator for artificial quadrupeds

    NASA Astrophysics Data System (ADS)

    Castellini, Horacio; Yudiarsah, Efta; Romanelli, Lilia; Cerdeira, Hilda A.

    2005-04-01

    Animal locomotion employs different periodic patterns known as animal gaits. In 1993, Collins and Stewart recognized that gaits possessed certain symmetries and characterized the gaits of quadrupeds and bipeds using permutation symmetry groups, which impose constraints on the locomotion center called the central pattern generator (CPG) in the animal brain. They modeled the CPG by coupling four nonlinear oscillators and found that it was possible to reproduce all symmetries of the gaits by changing the coupling strength. Here we propose to extend this idea using coupled chaotic oscillators synchronized using the Pyragas method in order to characterize the CPG symmetries. We also evaluate the time series behavior when the foot is in contact with the ground: this has potential robotic applications.

  2. Developing the Next Generation of Geoscientists

    NASA Astrophysics Data System (ADS)

    Sparrow, E. B.; Kopplin, M. R.

    2012-12-01

    The Monitoring Seasons Through Global Learning Communities (Seasons and Biomes), an inquiry- and project- based program, works with K-12 teachers and their students worldwide to increase awareness and understanding of the Earth as a system, and the science process. Seasons and Biomes is one of four GLOBE (Global learning and Observations to Benefit the Environment, www.globe.gov) earth system science projects. Seasons and Biomes engage students in ongoing research investigations as way of learning science. We do this by conducting for teachers, professional development workshops that incorporate science content, best teaching practices (that include inquiry, integrating science with math, language and art, authentic assessments, concept mapping), a model for student scientific research, and an earth system science approach. Teachers learn and practice standardized measurement protocols developed by GLOBE in the following areas of investigations: atmosphere, hydrology, soils, phenology and land cover/biology, as well as those developed by Seasons and Biomes on ice seasonality (freeze-up and break-up of rivers and lakes), active layer/depth of soil freezing (frost tube), mosquitoes (larvae abundance and identification of mosquito vectors for malaria and dengue fever) and plant invasive species. They also learn how to enter data as well as access data on the GLOBE website. Teachers in turn teach and work with their students in doing authentic science, contribute data to ongoing research as well as conduct their own studies. During the workshops we also provide guidance and opportunity for early career scientists to share their research, work with teachers and mentor them as well as to develop measurement protocols pertinent to their research. Similarly we work with GLOBE Alumni, students who were in the GLOBE program when they were in primary and/or secondary schools and have graduated from college, yet are still very much inspired and dedicated to working with

  3. Precise colocalization of interacting structural and pigmentary elements generates extensive color pattern variation in Phelsuma lizards

    PubMed Central

    2013-01-01

    Background Color traits in animals play crucial roles in thermoregulation, photoprotection, camouflage, and visual communication, and are amenable to objective quantification and modeling. However, the extensive variation in non-melanic pigments and structural colors in squamate reptiles has been largely disregarded. Here, we used an integrated approach to investigate the morphological basis and physical mechanisms generating variation in color traits in tropical day geckos of the genus Phelsuma. Results Combining histology, optics, mass spectrometry, and UV and Raman spectroscopy, we found that the extensive variation in color patterns within and among Phelsuma species is generated by complex interactions between, on the one hand, chromatophores containing yellow/red pteridine pigments and, on the other hand, iridophores producing structural color by constructive interference of light with guanine nanocrystals. More specifically, we show that 1) the hue of the vivid dorsolateral skin is modulated both by variation in geometry of structural, highly ordered narrowband reflectors, and by the presence of yellow pigments, and 2) that the reflectivity of the white belly and of dorsolateral pigmentary red marks, is increased by underlying structural disorganized broadband reflectors. Most importantly, these interactions require precise colocalization of yellow and red chromatophores with different types of iridophores, characterized by ordered and disordered nanocrystals, respectively. We validated these results through numerical simulations combining pigmentary components with a multilayer interferential optical model. Finally, we show that melanophores form dark lateral patterns but do not significantly contribute to variation in blue/green or red coloration, and that changes in the pH or redox state of pigments provide yet another source of color variation in squamates. Conclusions Precisely colocalized interacting pigmentary and structural elements generate extensive

  4. Modeling the morphodynamic galectin patterning network of the developing avian limb skeleton.

    PubMed

    Glimm, T; Bhat, R; Newman, S A

    2014-04-01

    We present a mathematical model for the morphogenesis and patterning of the mesenchymal condensations that serve as primordia of the avian limb skeleton. The model is based on the experimentally established dynamics of a multiscale regulatory network consisting of two glycan-binding proteins expressed early in limb development: CG (chicken galectin)-1A, CG-8 and their counterreceptors that determine the formation, size, number and spacing of the "protocondensations" that give rise to the condensations and subsequently the cartilaginous elements that serve as the templates of the bones. The model, a system of partial differential and integro-differential equations containing a flux term to represent local adhesion gradients, is simulated in a "full" and a "reduced" form to confirm that the system has pattern-forming capabilities and to explore the nature of the patterning instability. The full model recapitulates qualitatively and quantitatively the experimental results of network perturbation and leads to new predictions, which are verified by further experimentation. The reduced model is used to demonstrate that the patterning process is inherently morphodynamic, with cell motility being intrinsic to it. Furthermore, subtle relationships between cell movement and the positive and negative interactions between the morphogens produce regular patterns without the requirement for activators and inhibitors with widely separated diffusion coefficients. The described mechanism thus represents an extension of the category of activator-inhibitor processes capable of generating biological patterns with repetitive elements beyond the morphostatic mechanisms of the Turing/Gierer-Meinhardt type. PMID:24355216

  5. Development of an Adaptively Controlled Telescope with Star-Pattern Recognition Pointing

    NASA Astrophysics Data System (ADS)

    Sick, J. N.

    2003-12-01

    This paper describes the development of a 32-cm f/5 Newtonian telescope intended for use by amateur astronomers in producing scientifically useful observations through high-accuracy computer control. The telescope is designed to achieve a 10-arcsecond pointing accuracy through the use of a star-pattern recognition algorithm. This star-pattern recognition pointing algorithm allows pointing errors such as tube flexure and mount misalignment to be intuitively identified and corrected without the need for calibrating positional encoders. This star-pattern recognition algorithm is based on comparing the shapes of visible patterns of six stars in any given field of view to a pre-compiled catalog of star-patterns that is generated by a software package called Star Field Simulator. A second-generation algorithm is presented in this paper that features an empirical image appearance prediction system, which adds photometric measurements to the star-pattern recognition. This allows the effects of unresolvable clusters of stars, and the presence of non-stellar objects to be included in the star-pattern recognition process through the prediction of an object's pixel brightness and point spread function. Testing with pointing camera images has shown that star appearance on a CCD can be predicted with high accuracy. The telescope hardware features a unique fiberglass and metal composite construction technique for precision component placement. An innovative placement of the autoguiding camera at the Newtonian prime focus through an on-axis tracking platform is also featured. The telescope is controlled with real-time software, on a laptop computer, using modified Firewire video cameras to provide pointing and tracking data. To test the accuracy of the control algorithms and simulate the effects of errors from environmental and mechanical sources, a software application was written. Results from this and other tests have shown that this telescope can operate within the preset

  6. Patterning, specification, and differentiation in the developing hypothalamus.

    PubMed

    Bedont, Joseph L; Newman, Elizabeth A; Blackshaw, Seth

    2015-01-01

    Owing to its complex structure and highly diverse cell populations, the study of hypothalamic development has historically lagged behind that of other brain regions. However, in recent years, a greatly expanded understanding of hypothalamic gene expression during development has opened up new avenues of investigation. In this review, we synthesize existing work to present a holistic picture of hypothalamic development from early induction and patterning through nuclear specification and differentiation, with a particular emphasis on determination of cell fate. We will also touch on special topics in the field including the prosomere model, adult neurogenesis, and integration of migratory cells originating outside the hypothalamic neuroepithelium, and how these topics relate to our broader theme. PMID:25820448

  7. Patterns and development of floral asymmetry in Senna (Leguminosae, Cassiinae).

    PubMed

    Marazzi, Brigitte; Endress, Peter K

    2008-01-01

    The buzz-pollinated genus Senna (Leguminosae) is outstanding for including species with monosymmetric flowers and species with diverse asymmetric, enantiomorphic (enantiostylous) flowers. To recognize patterns of homology, we dissected the floral symmetry character complex and explored corolla morphology in 60 Senna species and studied floral development of four enantiomorphic species. The asymmetry morph of a flower is correlated with the direction of spiral calyx aestivation. We recognized five patterns of floral asymmetry, resulting from different combinations of six structural elements: deflection of the carpel, deflection of the median abaxial stamen, deflection or modification in size of one lateral abaxial stamen, and modification in shape and size of one or both lower petals. Prominent corolla asymmetry begins in the earl-stage bud (unequal development of lower petals). Androecium asymmetry begins either in the midstage bud (unequal development of thecae in median abaxial stamen; twisting of androecium) or at anthesis (stamen deflection). Gynoecium asymmetry begins in early bud (primordium off the median plane, ventral slit laterally oriented) or midstage to late bud (carpel deflection). In enantiostylous flowers, pronouncedly concave and robust petals of both monosymmetric and asymmetric corollas likely function to ricochet and direct pollen flow during buzz pollination. Occurrence of particular combinations of structural elements of floral symmetry in the subclades is shown. PMID:21632312

  8. Retinal waves coordinate patterned activity throughout the developing visual system

    PubMed Central

    Ackman, James B.; Burbridge, Timothy J.; Crair, Michael C.

    2014-01-01

    Summary The morphologic and functional development of the vertebrate nervous system is initially governed by genetic factors and subsequently refined by neuronal activity. However, fundamental features of the nervous system emerge before sensory experience is possible. Thus, activity-dependent development occurring before the onset of experience must be driven by spontaneous activity, but the origin and nature of activity in vivo remains largely untested. Here we use optical methods to demonstrate in live neonatal mice that waves of spontaneous retinal activity are present and propagate throughout the entire visual system before eye opening. This patterned activity encompassed the visual field, relied on cholinergic neurotransmission, preferentially initiated in the binocular retina, and exhibited spatiotemporal correlations between the two hemispheres. Retinal waves were the primary source of activity in the midbrain and primary visual cortex, but only modulated ongoing activity in secondary visual areas. Thus, spontaneous retinal activity is transmitted through the entire visual system and carries patterned information capable of guiding the activity-dependent development of complex intra- and inter- hemispheric circuits before the onset of vision. PMID:23060192

  9. Natural gas development and utilisation pattern in India

    SciTech Connect

    Mulchandani, H.K.; Balakrishnan, M.

    1984-02-01

    In this era of energy consciousness, Natural Gas is destined to play an important role in the economic life of India. The luxury of flaring into atmosphere is over. Rather stocks are being assessed and capital investments are planned for the optimum development and utilisation of gas. In this paper, authors have attempted to tie up various data on different aspects of gas business such as supply, source, production, utilisation pattern and its share in energy and economy. The optimal utilisation plan as discussed here could be of some value to the planners.

  10. Coherence of light and generation of speckle patterns in photobiology and photomedicine

    NASA Astrophysics Data System (ADS)

    Zalevsky, Zeev; Belkin, Michael

    2012-03-01

    The use of diodes instead of lasers was recently suggested for phototherapeutic applications. This trend is due to economical and practical reasons and is based on the argument that lasers have no preference over diodes as light sources as the former lose their coherency upon penetrating biological tissues. This module supports this claim while providing a brief explanation to non professionals on the meaning of coherence of light as well as the physics behind the generation of speckle patterns, and the relation of these physical entities to photomedicine.