A Critical Reassessment of Penetratin Translocation Across Lipid Membranes
Bárány-Wallje, Elsa; Keller, Sandro; Serowy, Steffen; Geibel, Sebastian; Pohl, Peter; Bienert, Michael; Dathe, Margitta
2005-01-01
Penetratin is a short, basic cell-penetrating peptide able to induce cellular uptake of a vast variety of large, hydrophilic cargos. We have reassessed the highly controversial issue of direct permeation of the strongly cationic peptide across negatively charged lipid membranes. Confocal laser scanning microscopy on rhodamine-labeled giant vesicles incubated with carboxyfluorescein-labeled penetratin yielded no evidence of transbilayer movement, in contradiction to previously reported results. Confocal fluorescence spectroscopy on black lipid membranes confirmed this finding, which was also not affected by application of a transmembrane electric potential difference. A novel dialysis assay based on tryptophan absorbance and fluorescence spectroscopy demonstrated that the permeability of small and large unilamellar vesicles to penetratin is <10−13 m/s. Taken together, the results show that penetratin is not capable of overcoming model membrane systems irrespective of the bilayer curvature or the presence of a transmembrane voltage. Thus, direct translocation across the hydrophobic core of the plasma membrane cannot account for the efficient uptake of penetratin into live cells, which is in accord with recent in vitro studies underlining the importance of endocytosis in the internalization process of cationic cell-penetrating peptides. PMID:16040762
Penetratin Story: An Overview.
Dupont, Edmond; Prochiantz, Alain; Joliot, Alain
2015-01-01
Cell-penetrating peptides are short, often hydrophilic peptides that get access to the intracellular milieu. They have aroused great interest both in academic and applied research. First, cellular internalization of CPPs often involves the crossing of a biological membrane (plasma or vesicular), thus challenging the view of the non-permeability of these structures to large hydrophilic molecules. Secondly, CPPs can drive the internalization of hydrophilic cargoes into cells, a rate-limiting step in the development of many therapeutic substances. Interestingly, the two most used CPPs, TAT and penetratin peptides, are derived from natural proteins, HIV Tat and Antennapedia homeoprotein, respectively. The identification of the penetratin peptide, summarized in this review, is intimately linked to the study of its parental natural protein. PMID:26202260
Induced gravity from curvature density preserving diffeomorphisms
NASA Astrophysics Data System (ADS)
Oda, Ichiro
2016-08-01
We construct not only an induced gravity model with restricted diffeomorphisms, that is, transverse diffeomorphisms that preserve the curvature density, but also with full diffeomorphisms. By solving the equations of motion, it turns out that these models produce Einstein's equations with a certain Newton constant in addition to the constraint for the curvature density. In the limit of the infinite Newton constant, the models give rise to induced gravity. Moreover, we discuss cosmological solutions on the basis of the gravitational models at hand.
Hydrophobic surfactant proteins strongly induce negative curvature.
Chavarha, Mariya; Loney, Ryan W; Rananavare, Shankar B; Hall, Stephen B
2015-07-01
The hydrophobic surfactant proteins SP-B and SP-C greatly accelerate the adsorption of vesicles containing the surfactant lipids to form a film that lowers the surface tension of the air/water interface in the lungs. Pulmonary surfactant enters the interface by a process analogous to the fusion of two vesicles. As with fusion, several factors affect adsorption according to how they alter the curvature of lipid leaflets, suggesting that adsorption proceeds via a rate-limiting structure with negative curvature, in which the hydrophilic face of the phospholipid leaflets is concave. In the studies reported here, we tested whether the surfactant proteins might promote adsorption by inducing lipids to adopt a more negative curvature, closer to the configuration of the hypothetical intermediate. Our experiments used x-ray diffraction to determine how the proteins in their physiological ratio affect the radius of cylindrical monolayers in the negatively curved, inverse hexagonal phase. With binary mixtures of dioleoylphosphatidylethanolamine (DOPE) and dioleoylphosphatidylcholine (DOPC), the proteins produced a dose-related effect on curvature that depended on the phospholipid composition. With DOPE alone, the proteins produced no change. With an increasing mol fraction of DOPC, the response to the proteins increased, reaching a maximum 50% reduction in cylindrical radius at 5% (w/w) protein. This change represented a doubling of curvature at the outer cylindrical surface. The change in spontaneous curvature, defined at approximately the level of the glycerol group, would be greater. Analysis of the results in terms of a Langmuir model for binding to a surface suggests that the effect of the lipids is consistent with a change in the maximum binding capacity. Our findings show that surfactant proteins can promote negative curvature, and support the possibility that they facilitate adsorption by that mechanism. PMID:26153706
Yesylevskyy, Semen; Marrink, Siewert-Jan; Mark, Alan E.
2009-01-01
Abstract Cell-penetrating peptides (CPPs) have recently attracted much interest due to their apparent ability to penetrate cell membranes in an energy-independent manner. Here molecular-dynamics simulation techniques were used to study the interaction of two CPPs: penetratin and the TAT peptide with 1,2-Dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC) phospolipid bilayers shed light on alternative mechanisms by which these peptides might cross biological membranes. In contrast to previous simulation studies of charged peptides interacting with lipid bilayers, no spontaneous formation of transmembrane pores was observed. Instead, the simulations suggest that the peptides may enter the cell by micropinocytosis, whereby the peptides induce curvature in the membrane, ultimately leading to the formation of small vesicles within the cell that encapsulate the peptides. Specifically, multiple peptides were observed to induce large deformations in the lipid bilayer that persisted throughout the timescale of the simulations (hundreds of nanoseconds). Pore formation could be induced in simulations in which an external potential was used to pull a single penetratin or TAT peptide into the membrane. With the use of umbrella-sampling techniques, the free energy of inserting a single penetratin peptide into a DPPC bilayer was estimated to be ∼75 kJmol−1, which suggests that the spontaneous penetration of single peptides would require a timescale of at least seconds to minutes. This work also illustrates the extent to which the results of such simulations can depend on the initial conditions, the extent of equilibration, the size of the system, and the conditions under which the simulations are performed. The implications of this with respect to the current systems and to simulations of membrane-peptide interactions in general are discussed. PMID:19580742
Negative Gaussian curvature from induced metric changes.
Modes, Carl D; Warner, Mark
2015-07-01
We revisit the light or heat-induced changes in topography of initially flat sheets of a solid that elongate or contract along patterned in-plane director fields. For radial or azimuthal directors, negative Gaussian curvature is generated-so-called "anticones." We show that azimuthal material displacements are required for the distorted state to be stretch free and bend minimizing. The resultant shapes are smooth and asterlike and can become reentrant in the azimuthal coordinate for large deformations. We show that care is needed when considering elastomers rather than glasses, although the former offer huge deformations. PMID:26274106
Adsorbate-induced curvature and stiffening of graphene.
Svatek, Simon A; Scott, Oliver R; Rivett, Jasmine P H; Wright, Katherine; Baldoni, Matteo; Bichoutskaia, Elena; Taniguchi, Takashi; Watanabe, Kenji; Marsden, Alexander J; Wilson, Neil R; Beton, Peter H
2015-01-14
The adsorption of the alkane tetratetracontane (TTC, C44H90) on graphene induces the formation of a curved surface stabilized by a gain in adsorption energy. This effect arises from a curvature-dependent variation of a moiré pattern due to the mismatch of the carbon-carbon separation in the adsorbed molecule and the period of graphene. The effect is observed when graphene is transferred onto a deformable substrate, which in our case is the interface between water layers adsorbed on mica and an organic solvent, but is not observed on more rigid substrates such as boron nitride. Our results show that molecular adsorption can be influenced by substrate curvature, provide an example of two-dimensional molecular self-assembly on a soft, responsive interface, and demonstrate that the mechanical properties of graphene may be modified by molecular adsorption, which is of relevance to nanomechanical systems, electronics, and membrane technology. PMID:25469625
Facile Noninvasive Retinal Gene Delivery Enabled by Penetratin.
Liu, Chang; Jiang, Kuan; Tai, Lingyu; Liu, Yu; Wei, Gang; Lu, Weiyue; Pan, Weisan
2016-08-01
Gene delivery to the posterior segment of the eye is severely hindered by the impermeability of defensive barriers; therefore, in clinical settings, genomic medicines are mainly administered by intravitreal injection. We previously found that penetratin could transport the covalently conjugated fluorophore to the fundus oculi by topical instillation. In this study, gene delivery systems enabled by penetratin were designed based on electrostatic binding to target the retina via a noninvasive administration route and prepared with red fluorescent protein plasmid (pRFP) and/or poly(amidoamine) dendrimer of low molecular weight (G3 PAMAM). Formulation optimization, structure confirmation, and characterization were subsequently conducted. Penetratin alone showed limited ability to condense the plasmid but had powerful uptake and transfection by corneal and conjunctival cells. G3 PAMAM was nontoxic to the ocular cells, and when introduced into the penetratin-incorporated complex, the plasmid was condensed more compactly. Therefore, further improved cellular uptake and transfection were observed. After being instilled in the conjunctival sac of rats, the intact complexes penetrated rapidly from the ocular surface into the fundus and resided in the retina for more than 8 h, which resulted in efficient expression of RFP in the posterior segment. Intraocular distribution of the complexes suggested that the plasmids were absorbed into the eyes through a noncorneal pathway during which penetratin played a crucial role. This study provides a facile and friendly approach for intraocular gene delivery and is an important step toward the development of noninvasive gene therapy for posterior segment diseases. PMID:27400087
Defining the free-energy landscape of curvature-inducing proteins on membrane bilayers
NASA Astrophysics Data System (ADS)
Tourdot, Richard W.; Ramakrishnan, N.; Radhakrishnan, Ravi
2014-08-01
Curvature-sensing and curvature-remodeling proteins, such as Amphiphysin, Epsin, and Exo70, are known to reshape cell membranes, and this remodeling event is essential for key biophysical processes such as tubulation, exocytosis, and endocytosis. Curvature-inducing proteins can act as curvature sensors; they aggregate to membrane regions matching their intrinsic curvature; as well as induce curvature in cell membranes to stabilize emergent high curvature, nonspherical, structures such as tubules, discs, and caveolae. A definitive understanding of the interplay between protein recruitment and migration, the evolution of membrane curvature, and membrane morphological transitions is emerging but remains incomplete. Here, within a continuum framework and using the machinery of Monte Carlo simulations, we introduce and compare three free-energy methods to delineate the free-energy landscape of curvature-inducing proteins on bilayer membranes. We demonstrate the utility of the Widom test particle (or field) insertion methodology in computing the excess chemical potentials associated with curvature-inducing proteins on the membrane—in particular, we use this method to track the onset of morphological transitions in the membrane at elevated protein densities. We validate this approach by comparing the results from the Widom method with those of thermodynamic integration and Bennett acceptance ratio methods. Furthermore, the predictions from the Widom method have been tested against analytical calculations of the excess chemical potential at infinite dilution. Our results are useful in precisely quantifying the free-energy landscape, and also in determining the phase boundaries associated with curvature-induction, curvature-sensing, and morphological transitions. This approach can be extended to studies exploring the role of thermal fluctuations and other external (control) variables, such as membrane excess area, in shaping curvature-mediated interactions on bilayer
Defining the free-energy landscape of curvature-inducing proteins on membrane bilayers
Tourdot, Richard W.; Ramakrishnan, N.; Radhakrishnan, Ravi
2015-01-01
Curvature-sensing and curvature-remodeling proteins, such as Amphiphysin, Epsin, and Exo70, are known to reshape cell membranes, and this remodeling event is essential for key biophysical processes such as tubulation, exocytosis, and endocytosis. Curvature-inducing proteins can act as curvature sensors; they aggregate to membrane regions matching their intrinsic curvature; as well as induce curvature in cell membranes to stabilize emergent high curvature, nonspherical, structures such as tubules, discs, and caveolae. A definitive understanding of the interplay between protein recruitment and migration, the evolution of membrane curvature, and membrane morphological transitions is emerging but remains incomplete. Here, within a continuum framework and using the machinery of Monte Carlo simulations, we introduce and compare three free-energy methods to delineate the free-energy landscape of curvature-inducing proteins on bilayer membranes. We demonstrate the utility of the Widom test particle (or field) insertion methodology in computing the excess chemical potentials associated with curvature-inducing proteins on the membrane—in particular, we use this method to track the onset of morphological transitions in the membrane at elevated protein densities. We validate this approach by comparing the results from the Widom method with those of thermodynamic integration and Bennett acceptance ratio methods. Furthermore, the predictions from the Widom method have been tested against analytical calculations of the excess chemical potential at infinite dilution. Our results are useful in precisely quantifying the free-energy landscape, and also in determining the phase boundaries associated with curvature-induction, curvature-sensing, and morphological transitions. This approach can be extended to studies exploring the role of thermal fluctuations and other external (control) variables, such as membrane excess area, in shaping curvature-mediated interactions on bilayer
Defining the free-energy landscape of curvature-inducing proteins on membrane bilayers.
Tourdot, Richard W; Ramakrishnan, N; Radhakrishnan, Ravi
2014-08-01
Curvature-sensing and curvature-remodeling proteins, such as Amphiphysin, Epsin, and Exo70, are known to reshape cell membranes, and this remodeling event is essential for key biophysical processes such as tubulation, exocytosis, and endocytosis. Curvature-inducing proteins can act as curvature sensors; they aggregate to membrane regions matching their intrinsic curvature; as well as induce curvature in cell membranes to stabilize emergent high curvature, nonspherical, structures such as tubules, discs, and caveolae. A definitive understanding of the interplay between protein recruitment and migration, the evolution of membrane curvature, and membrane morphological transitions is emerging but remains incomplete. Here, within a continuum framework and using the machinery of Monte Carlo simulations, we introduce and compare three free-energy methods to delineate the free-energy landscape of curvature-inducing proteins on bilayer membranes. We demonstrate the utility of the Widom test particle (or field) insertion methodology in computing the excess chemical potentials associated with curvature-inducing proteins on the membrane-in particular, we use this method to track the onset of morphological transitions in the membrane at elevated protein densities. We validate this approach by comparing the results from the Widom method with those of thermodynamic integration and Bennett acceptance ratio methods. Furthermore, the predictions from the Widom method have been tested against analytical calculations of the excess chemical potential at infinite dilution. Our results are useful in precisely quantifying the free-energy landscape, and also in determining the phase boundaries associated with curvature-induction, curvature-sensing, and morphological transitions. This approach can be extended to studies exploring the role of thermal fluctuations and other external (control) variables, such as membrane excess area, in shaping curvature-mediated interactions on bilayer
Kegulian, Natalie C; Sankhagowit, Shalene; Apostolidou, Melania; Jayasinghe, Sajith A; Malmstadt, Noah; Butler, Peter C; Langen, Ralf
2015-10-23
Islet amyloid polypeptide (IAPP) is a 37-amino acid amyloid protein intimately associated with pancreatic islet β-cell dysfunction and death in type II diabetes. In this study, we combine spectroscopic methods and microscopy to investigate α-helical IAPP-membrane interactions. Using light scattering and fluorescence microscopy, we observe that larger vesicles become smaller upon treatment with human or rat IAPP. Electron microscopy shows the formation of various highly curved structures such as tubules or smaller vesicles in a membrane-remodeling process, and spectrofluorometric detection of vesicle leakage shows disruption of membrane integrity. This effect is stronger for human IAPP than for the less toxic rat IAPP. From CD spectra in the presence of different-sized vesicles, we also uncover the membrane curvature-sensing ability of IAPP and find that it transitions from inducing to sensing membrane curvature when lipid negative charge is decreased. Our in vivo EM images of immunogold-labeled rat IAPP and human IAPP show both forms to localize to mitochondrial cristae, which contain not only locally curved membranes but also phosphatidylethanolamine and cardiolipin, lipids with high spontaneous negative curvature. Disruption of membrane integrity by induction of membrane curvature could apply more broadly to other amyloid proteins and be responsible for membrane damage observed in other amyloid diseases as well. PMID:26283787
Gil-Parrado, Shirley; Assfalg-Machleidt, Irmgard; Fiorino, Ferdinando; Deluca, Dominga; Pfeiler, Dietmar; Schaschke, Norbert; Moroder, Luis; Machleidt, Werner
2003-03-01
The ubiquitous calpains, mu- and m-calpain, have been implicated in essential physiological processes and various pathologies. Cell-permeable specific inhibitors are important tools to elucidate the roles of calpains in cultivated cells and animal models. The synthetic N-acetylated 27-mer peptide derived from exon B of the inhibitory domain 1 of human calpastatin (CP1B) is unique as a potent and highly selective reversible calpain inhibitor, but is poorly cell-permeant. By addition of N-terminal cysteine residues we have generated a disulfide-conjugated CP1B with the cell-penetrating 16-mer peptide penetratin derived from the third helix of the Antennapedia homeodomain protein. The inhibitory potency and selectivity of CP1B for calpain versus cathepsin B and L, caspase 3 and the proteasome was not affected by the conjugation with penetratin. The conjugate was shown to efficiently penetrate into living LCLC 103H cells, since it prevents ionomycin-induced calpain activation at 200-fold lower concentration than the non-conjugated inhibitor and is able to reduce calpain-triggered apoptosis of these cells. Penetratin-conjugated CP1B seems to be a promising alternative to the widely used cell-permeable peptide aldehydes (e.g. calpain inhibitor 1) which inhibit the lysosomal cathepsins and partially the proteasome as well or even better than the calpains. PMID:12715890
Curvature-induced radiation of surface plasmon polaritons propagating around bends
Hasegawa, Keisuke; Noeckel, Jens U.; Deutsch, Miriam
2007-06-15
We present a theoretical study of the curvature-induced radiation of surface plasmon polaritons propagating around bends at metal-dielectric interfaces. We explain qualitatively how the curvature leads to distortion of the phase front, causing the fields to radiate energy away from the metal-dielectric interface. We then quantify, both analytically and numerically, radiation losses and energy transmission efficiencies of surface plasmon polaritons propagating around bends with varying radii as well as sign of curvature.
Cosmology of a holographic induced gravity model with curvature effects
Bouhmadi-Lopez, Mariam; Errahmani, Ahmed; Ouali, Taoufiq
2011-10-15
We present a holographic model of the Dvali-Gabadadze-Porrati scenario with a Gauss-Bonnet term in the bulk. We concentrate on the solution that generalizes the normal Dvali-Gabadadze-Porrati branch. It is well known that this branch cannot describe the late-time acceleration of the universe even with the inclusion of a Gauss-Bonnet term. Here, we show that this branch in the presence of a Gauss-Bonnet curvature effect and a holographic dark energy with the Hubble scale as the infrared cutoff can describe the late-time acceleration of the universe. It is worthwhile to stress that such an energy density component cannot do the same job on the normal Dvali-Gabadadze-Porrati branch (without Gauss-Bonnet modifications) nor in a standard four-dimensional relativistic model. The acceleration on the brane is also presented as being induced through an effective dark energy which corresponds to a balance between the holographic one and geometrical effects encoded through the Hubble parameter.
An Experimental Study of Laminarization Induced by Acceleration and Curvature
NASA Astrophysics Data System (ADS)
Jackson, R. Brian
The Generation IV Very High Temperature Reactor (VHTR) design is being actively studied in various countries for application due to its inherent passive safe design, higher thermal efficiencies, and proposed capability of providing high temperature process heat. The pebble bed core is one of two core designs used in gas reactors. In the pebble bed core there are mechanisms present which can cause the flow to laminarize, thus reducing its heat transfer effectiveness. Wind tunnel experiments were conducted using Particle Image Velocimetry (PIV) to investigate boundary layer laminarization due to flow acceleration and convex curvature effects. The flow was subject to acceleration and curvature both separately and together and the flow behavior characterized with velocity flow profiles, mean boundary layer parameters, and turbulence quantities. Laminarization was identified and the influence of acceleration and curvature was characterized.
Protein-Induced Membrane Curvature Alters Local Membrane Tension
Rangamani, Padmini; Mandadap, Kranthi K.; Oster, George
2014-01-01
Adsorption of proteins onto membranes can alter the local membrane curvature. This phenomenon has been observed in biological processes such as endocytosis, tubulation, and vesiculation. However, it is not clear how the local surface properties of the membrane, such as membrane tension, change in response to protein adsorption. In this article, we show that the partial differential equations arising from classical elastic model of lipid membranes, which account for simultaneous changes in shape and membrane tension due to protein adsorption in a local region, cannot be solved for nonaxisymmetric geometries using straightforward numerical techniques; instead, a viscous-elastic formulation is necessary to fully describe the system. Therefore, we develop a viscous-elastic model for inhomogeneous membranes of the Helfrich type. Using the newly available viscous-elastic model, we find that the lipids flow to accommodate changes in membrane curvature during protein adsorption. We show that, at the end of protein adsorption process, the system sustains a residual local tension to balance the difference between the actual mean curvature and the imposed spontaneous curvature. We also show that this change in membrane tension can have a functional impact such as altered response to pulling forces in the presence of proteins. PMID:25099814
Stress-induced curvature engineering in surface-micromachined devices
NASA Astrophysics Data System (ADS)
Aksyuk, Vladimir A.; Pardo, Flavio; Bishop, David J.
1999-03-01
Residual stress and stress gradients play an important role in determining equilibrium shape and behavior of various Si surface-micromachined devices under applied loads. This is particularly true for system having large-area plates and long beams where curvature resulting from stress can lead to significant deviations from stress-free shape. To gain better understanding of these properties, we have measured the equilibrium shapes of various structures built on the MCNC MUMPs using an interferometric profiler. The structures were square plates and long beams composed of various combinations of polysilicon an oxide layers. Some of the structures had additional MUMPs metal layer on top, while on others in-house chromium-gold stacks of varying thickness have been deposited. Temperature dependence of the curvature was measured for some plates. We have used these data in conjunction with simple models to significantly improve the performance of our micromachined devices. While for some structures such as large area reflectors the curvature had to be minimized, it could be advantageously exploited by others, for example vertical actuators for self-assembly.
NASA Astrophysics Data System (ADS)
Bracken, Paul
2007-05-01
The generalized Weierstrass (GW) system is introduced and its correspondence with the associated two-dimensional nonlinear sigma model is reviewed. The method of symmetry reduction is systematically applied to derive several classes of invariant solutions for the GW system. The solutions can be used to induce constant mean curvature surfaces in Euclidean three space. Some properties of the system for the case of nonconstant mean curvature are introduced as well.
Comparative effectiveness of metal ions in inducing curvature of primary roots of Zea mays
NASA Technical Reports Server (NTRS)
Hasenstein, K. H.; Evans, M. L.; Stinemetz, C. L.; Moore, R.; Fondren, W. M.; Koon, E. C.; Higby, M. A.; Smucker, A. J.
1988-01-01
We used five cultivars of Zea mays (Bear Hybrid WF9 * 38MS, B73 * Missouri 17, Yellow Dent, Merit, and Great Lakes Hybrid 422) to reinvestigate the specificity of metal ions for inducing root curvature. Of 17 cations tested, 6 (Al3+, Ba2+, Ca2+, Cd2+, Cu2+, Zn2+) induced curvature. Roots curved away from Al3+, Ba2+, and Cd2+. Roots curved away from low (0.1 millimolar) concentrations of Cu2+ but toward higher (1-5 millimolar) concentrations. Roots initially curved away from Zn2+ but the direction of the subsequent curvature was unpredictable. In most cases, roots of all cultivars curved towards calcium. However, in some tests there was no response to calcium or even (especially in the cultivars Merit and B73 * Missouri 17) substantial curvature away from calcium. The results indicate that the induction of root curvature is not specific for calcium. The results are discussed relative to the possible role of calmodulin as a mediator of ion-induced root curvature.
Lipid membrane-mediated attraction between curvature inducing objects.
van der Wel, Casper; Vahid, Afshin; Šarić, Anđela; Idema, Timon; Heinrich, Doris; Kraft, Daniela J
2016-01-01
The interplay of membrane proteins is vital for many biological processes, such as cellular transport, cell division, and signal transduction between nerve cells. Theoretical considerations have led to the idea that the membrane itself mediates protein self-organization in these processes through minimization of membrane curvature energy. Here, we present a combined experimental and numerical study in which we quantify these interactions directly for the first time. In our experimental model system we control the deformation of a lipid membrane by adhering colloidal particles. Using confocal microscopy, we establish that these membrane deformations cause an attractive interaction force leading to reversible binding. The attraction extends over 2.5 times the particle diameter and has a strength of three times the thermal energy (-3.3 kBT). Coarse-grained Monte-Carlo simulations of the system are in excellent agreement with the experimental results and prove that the measured interaction is independent of length scale. Our combined experimental and numerical results reveal membrane curvature as a common physical origin for interactions between any membrane-deforming objects, from nanometre-sized proteins to micrometre-sized particles. PMID:27618764
The cellular response to curvature-induced stress
NASA Astrophysics Data System (ADS)
Biton, Y. Y.; Safran, S. A.
2009-12-01
We present a theoretical model to explain recent observations of the orientational response of cells to unidirectional curvature. Experiments show that some cell types when plated on a rigid cylindrical surface tend to reorient their shape and stress fibers along the axis of the cylinder, while others align their stress fibers perpendicular to that axis. Our model focuses on the competition of the shear stress—that results from cell adhesion and active contractility—and the anisotropic bending stiffness of the stress fibers. We predict the cell orientation angle that results from the balance of these two forces in a mechanical equilibrium. The conditions under which the different experimental observations can be obtained are discussed in terms of the theory.
Membrane curvature induced by Arf1-GTP is essential for vesicle formation
Beck, Rainer; Sun, Zhe; Adolf, Frank; Rutz, Chistoph; Bassler, Jochen; Wild, Klemens; Sinning, Irmgard; Hurt, Ed; Brügger, Britta; Béthune, Julien; Wieland, Felix
2008-01-01
The GTPase Arf1 is considered as a molecular switch that regulates binding and release of coat proteins that polymerize on membranes to form transport vesicles. Here, we show that Arf1-GTP induces positive membrane curvature and find that the small GTPase can dimerize dependent on GTP. Investigating a possible link between Arf dimerization and curvature formation, we isolated an Arf1 mutant that cannot dimerize. Although it was capable of exerting the classical role of Arf1 as a coat receptor, it could not mediate the formation of COPI vesicles from Golgi-membranes and was lethal when expressed in yeast. Strikingly, this mutant was not able to deform membranes, suggesting that GTP-induced dimerization of Arf1 is a critical step inducing membrane curvature during the formation of coated vesicles. PMID:18689681
Relaxation of curvature-induced elastic stress by the Asaro-Tiller-Grinfeld instability
NASA Astrophysics Data System (ADS)
Köhler, C.; Backofen, R.; Voigt, A.
2015-08-01
A two-dimensional crystal on the surface of a sphere experiences elastic stress due to the incompatibility of the crystal axes and the curvature. A common mechanism to relax elastic stress is the Asaro-Tiller-Grinfeld (ATG) instability. With a combined numerical and analytical approach, we demonstrate that also curvature-induced stress in surface crystals can be relaxed by the long-wavelength ATG instability. The numerical results are obtained using a surface phase-field crystal (PFC) model, from which we determine the characteristic wave numbers of the ATG instability for various surface coverages corresponding to different curvature-induced compressions. The results are compared with an analytic expression for the characteristic wave number, obtained from a continuum approach which accounts for hexagonal crystals and intrinsic PFC symmetries. We find our numerical results in accordance with the analytical predictions.
Curvature-induced activation of a passive tracer in an active bath
NASA Astrophysics Data System (ADS)
Mallory, S. A.; Valeriani, C.; Cacciuto, A.
2014-09-01
We use numerical simulations to study the motion of a large asymmetric tracer immersed in a low-density suspension of self-propelled particles in two dimensions. Specifically, we analyze how the curvature of the tracer affects its translational and rotational motion in an active environment. We find that even very small amounts of curvature are sufficient for the active bath to impart directed motion to the tracer, which results in its effective activation. We propose simple scaling arguments to characterize this induced activity in terms of the curvature of the tracer and the strength of the self-propelling force. Our results suggest new ways of controlling the transport properties of passive tracers in an active medium by carefully tailoring their geometry.
Curvature-induced activation of a passive tracer in an active bath.
Mallory, S A; Valeriani, C; Cacciuto, A
2014-09-01
We use numerical simulations to study the motion of a large asymmetric tracer immersed in a low-density suspension of self-propelled particles in two dimensions. Specifically, we analyze how the curvature of the tracer affects its translational and rotational motion in an active environment. We find that even very small amounts of curvature are sufficient for the active bath to impart directed motion to the tracer, which results in its effective activation. We propose simple scaling arguments to characterize this induced activity in terms of the curvature of the tracer and the strength of the self-propelling force. Our results suggest new ways of controlling the transport properties of passive tracers in an active medium by carefully tailoring their geometry. PMID:25314448
Smrt, Sean T.; Draney, Adrian W.; Lorieau, Justin L.
2015-01-01
The highly conserved N-terminal 23 residues of the hemagglutinin glycoprotein, known as the fusion peptide domain (HAfp23), is vital to the membrane fusion and infection mechanism of the influenza virus. HAfp23 has a helical hairpin structure consisting of two tightly packed amphiphilic helices that rest on the membrane surface. We demonstrate that HAfp23 is a new class of amphipathic helix that functions by leveraging the negative curvature induced by two tightly packed helices on membranes. The helical hairpin structure has an inverted wedge shape characteristic of negative curvature lipids, with a bulky hydrophobic region and a relatively small hydrophilic head region. The F3G mutation reduces this inverted wedge shape by reducing the volume of its hydrophobic base. We show that despite maintaining identical backbone structures and dynamics as the wild type HAfp23, the F3G mutant has an attenuated fusion activity that is correlated to its reduced ability to induce negative membrane curvature. The inverted wedge shape of HAfp23 is likely to play a crucial role in the initial stages of membrane fusion by stabilizing negative curvature in the fusion stalk. PMID:25398882
Alves, Isabel D.; Bechara, Cherine; Walrant, Astrid; Zaltsman, Yefim; Jiao, Chen-Yu; Sagan, Sandrine
2011-01-01
Background Penetratin is a positively charged cell-penetrating peptide (CPP) that has the ability to bind negatively charged membrane components, such as glycosaminoglycans and anionic lipids. Whether this primary interaction of penetratin with these cell surface components implies that the peptide will be further internalized is not clear. Methodology Using mass spectrometry, the amount of internalized and membrane bound penetratin remaining after washings, were quantified in three different cell lines: wild type (WT), glycosaminoglycans- (GAGneg) and sialic acid-deficient (SAneg) cells. Additionally, the affinity and kinetics of the interaction of penetratin to membrane models composed of pure lipids and membrane fragments from the referred cell lines was investigated, as well as the thermodynamics of such interactions using plasmon resonance and calorimetry. Principal Findings Penetratin internalized with the same efficacy in the three cell lines at 1 µM, but was better internalized at 10 µM in SAneg>WT>GAGneg. The heat released by the interaction of penetratin with these cells followed the ranking order of internalization efficiency. Penetratin had an affinity of 10 nM for WT cells and µM for SAneg and GAGneg cells and model membrane of phospholipids. The remaining membrane-bound penetratin after cells washings was similar in WT and GAGneg cells, which suggested that these binding sites relied on membrane phospholipids. The interaction of penetratin with carbohydrates was more superficial and reversible while it was stronger with phospholipids, likely because the peptide can intercalate between the fatty acid chains. Conclusion/Significance These results show that accumulation and high-affinity binding of penetratin at the cell-surface do not reflect the internalization efficacy of the peptide. Altogether, these data further support translocation (membrane phospholipids interaction) as being the internalization pathway used by penetratin at low
Curvature induced by amyloplast magnetophoresis in protonemata of the moss Ceratodon purpureus
NASA Technical Reports Server (NTRS)
Kuznetsov, O. A.; Schwuchow, J.; Sack, F. D.; Hasenstein, K. H.
1999-01-01
After gravistimulation of Ceratodon purpureus (Hedw.) Brid. protonemata in the dark, amyloplast sedimentation was followed by upward curvature in the wild-type (WT) and downward curvature in the wwr mutant (wrong way response). We used ponderomotive forces induced by high-gradient magnetic fields (HGMF) to simulate the effect of gravity and displace the presumptive statoliths. The field was applied by placing protonemata either between two permanent magnets at the edge of the gap, close to the edge of a magnetized ferromagnetic wedge, or close to a small (<1 mm) permanent magnet. Continuous application of an HGMF in all three configurations resulted in plastid displacement and induced curvature in tip cells of WT and wwr protonemata. WT cells curved toward the HGMF, and wwr cells curved away from the HGMF, comparable to gravitropism. Plastids isolated from protonemal cultures had densities ranging from 1.24 to 1.38 g cm-3. Plastid density was similar for both genotypes, but the mutant contained larger plastids than the WT. The size difference might explain the stronger response of the wwr protonemata to the HGMF. Our data support the plastid-based theory of gravitropic sensing and suggest that HGMF-induced ponderomotive forces can substitute for gravity.
Curvature induced by amyloplast magnetophoresis in protonemata of the moss Ceratodon purpureus.
Kuznetsov, O A; Schwuchow, J; Sack, F D; Hasenstein, K H
1999-02-01
After gravistimulation of Ceratodon purpureus (Hedw.) Brid. protonemata in the dark, amyloplast sedimentation was followed by upward curvature in the wild-type (WT) and downward curvature in the wwr mutant (wrong way response). We used ponderomotive forces induced by high-gradient magnetic fields (HGMF) to simulate the effect of gravity and displace the presumptive statoliths. The field was applied by placing protonemata either between two permanent magnets at the edge of the gap, close to the edge of a magnetized ferromagnetic wedge, or close to a small (<1 mm) permanent magnet. Continuous application of an HGMF in all three configurations resulted in plastid displacement and induced curvature in tip cells of WT and wwr protonemata. WT cells curved toward the HGMF, and wwr cells curved away from the HGMF, comparable to gravitropism. Plastids isolated from protonemal cultures had densities ranging from 1.24 to 1.38 g cm-3. Plastid density was similar for both genotypes, but the mutant contained larger plastids than the WT. The size difference might explain the stronger response of the wwr protonemata to the HGMF. Our data support the plastid-based theory of gravitropic sensing and suggest that HGMF-induced ponderomotive forces can substitute for gravity. PMID:9952461
Bending-induced mode non-degeneracy and coupling in chalcogenide negative curvature fibers.
Wei, Chengli; Menyuk, Curtis R; Hu, Jonathan
2016-05-30
We study bend loss in chalcogenide negative curvature fibers with different polarizations, different tube wall thicknesses, and different bend directions relative to the mode polarization. The coupling between the core mode and tube modes induces bend loss peaks in the two non-degenerate modes at the same bend radius. There is as much as a factor of 28 difference between the losses of the two polarization modes. The fiber with a larger tube wall thickness, corresponding to a smaller inner tube diameter, can sustain a smaller bend radius. The bend loss is sensitive to the bend direction when coupling occurs between the core mode and tube modes. A bend loss of 0.2 dB/m at a bend radius of 16 cm, corresponding to 0.2 dB/turn, can be achieved in a chalcogenide negative curvature fiber. PMID:27410139
Modeling of stress-induced curvature in surface-micromachined devices
NASA Astrophysics Data System (ADS)
Cowan, William D.; Bright, Victor M.; Elvin, Alex A.; Koester, David A.
1997-09-01
This paper compares measured to modeled stress-induced curvature of simple piston micromirrors. Two similar flexure-beam micromirror designs were fabricate using the 11th DARPA-supported multi-user MEMS processes (MUMPs) run. The test devices vary only in the MUMPs layers used for fabrication. In one case the mirror plate is the 1.5 micrometers thick Poly2 layer. The other mirror design employs stacked Poly1 and Poly2 layers for a total thickness of 3.5 micrometers . Both mirror structures are covered with the standard MUMPs metallization of approximately 200 angstrom of chromium and 0.5 micrometers of gold. Curvature of these devices was measured to within +/- 5 nm with a computer controlled microscope laser interferometer system. As intended, the increased thickness of the stacked polysilicon layers reduces the mirror curvature by a factor of 4. The two micromirror designs were modeled using IntelliCAD, a commercial CAD system for MEMS. The basis of analysis was the finite element method. Simulated results using MUMPs 11 film parameters showed qualitative agreement with measured data, but obvious quantitative differences. Subsequent remeasurement of the metal stress and use of the new value significantly improved model agreement with the measured data. The paper explores the effect of several film parameters on the modeled structures. Implications for MEMS film metrology, and test structures are considered.
NASA Astrophysics Data System (ADS)
van der Gucht, Jasper; Ershov, Dmitry
2014-03-01
Objects floating at a liquid interface, such as breakfast cereals floating in a bowl of milk or bubbles at the surface of a soft drink, clump together in space-saving hexagons to minimize the disruption of the liquid interface. Micrometer-sized colloidal particles embedded in a liquid interface normally do not disrupt the interface, so that such clustering does not occur. Here, we show that this is different when the interface has a curvature that is anisotropic. We find that in this case the condition of constant contact angle along the three-phase contact line can only be satisfied when the interface is deformed. We present experiments and numerical calculations that demonstrate how this leads to quadrupolar capillary interactions between the particles, giving rise to organization into regular square lattices. We demonstrate that the strength of the governing anisotropic interactions can be rescaled with the deviatoric curvature alone, irrespective of the exact shape of the liquid interface. Our results suggest that anisotropic interactions can easily be induced between isotropic colloids through tailoring of the interfacial curvature.
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins
NASA Astrophysics Data System (ADS)
Ramakrishnan, N.; Sunil Kumar, P. B.; Radhakrishnan, Ravi
2014-10-01
Biological membranes constitute boundaries of cells and cell organelles. These membranes are soft fluid interfaces whose thermodynamic states are dictated by bending moduli, induced curvature fields, and thermal fluctuations. Recently, there has been a flood of experimental evidence highlighting active roles for these structures in many cellular processes ranging from trafficking of cargo to cell motility. It is believed that the local membrane curvature, which is continuously altered due to its interactions with myriad proteins and other macromolecules attached to its surface, holds the key to the emergent functionality in these cellular processes. Mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the protein, shape and amino acid composition of the protein, and its amino acid contents. The specificity of molecular interactions together with the cooperativity of multiple proteins induce and stabilize complex membrane shapes at the mesoscale. These shapes span a wide spectrum ranging from the spherical plasma membrane to the complex cisternae of the Golgi apparatus. Mapping the relation between the protein-induced deformations at the molecular scale and the resulting mesoscale morphologies is key to bridging cellular experiments across various length scales. In this review, we focus on the theoretical and computational methods used to understand the phenomenology underlying protein-driven membrane remodeling. Interactions at the molecular scale can be computationally probed by all atom and coarse grained molecular dynamics (MD, CGMD), as well as dissipative particle dynamics (DPD) simulations, which we only describe in passing. We choose to focus on several continuum approaches extending the Canham-Helfrich elastic energy model for membranes to include the effect of curvature-inducing proteins and explore the conformational phase space of such systems. In this description, the
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins.
Ramakrishnan, N; Sunil Kumar, P B; Radhakrishnan, Ravi
2014-10-01
Biological membranes constitute boundaries of cells and cell organelles. These membranes are soft fluid interfaces whose thermodynamic states are dictated by bending moduli, induced curvature fields, and thermal fluctuations. Recently, there has been a flood of experimental evidence highlighting active roles for these structures in many cellular processes ranging from trafficking of cargo to cell motility. It is believed that the local membrane curvature, which is continuously altered due to its interactions with myriad proteins and other macromolecules attached to its surface, holds the key to the emergent functionality in these cellular processes. Mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the protein, shape and amino acid composition of the protein, and its amino acid contents. The specificity of molecular interactions together with the cooperativity of multiple proteins induce and stabilize complex membrane shapes at the mesoscale. These shapes span a wide spectrum ranging from the spherical plasma membrane to the complex cisternae of the Golgi apparatus. Mapping the relation between the protein-induced deformations at the molecular scale and the resulting mesoscale morphologies is key to bridging cellular experiments across the various length scales. In this review, we focus on the theoretical and computational methods used to understand the phenomenology underlying protein-driven membrane remodeling. Interactions at the molecular scale can be computationally probed by all atom and coarse grained molecular dynamics (MD, CGMD), as well as dissipative particle dynamics (DPD) simulations, which we only describe in passing. We choose to focus on several continuum approaches extending the Canham - Helfrich elastic energy model for membranes to include the effect of curvature-inducing proteins and explore the conformational phase space of such systems. In this
Mesoscale computational studies of membrane bilayer remodeling by curvature-inducing proteins
Ramakrishnan, N.; Sunil Kumar, P. B.; Radhakrishnan, Ravi
2014-01-01
Biological membranes constitute boundaries of cells and cell organelles. These membranes are soft fluid interfaces whose thermodynamic states are dictated by bending moduli, induced curvature fields, and thermal fluctuations. Recently, there has been a flood of experimental evidence highlighting active roles for these structures in many cellular processes ranging from trafficking of cargo to cell motility. It is believed that the local membrane curvature, which is continuously altered due to its interactions with myriad proteins and other macromolecules attached to its surface, holds the key to the emergent functionality in these cellular processes. Mechanisms at the atomic scale are dictated by protein-lipid interaction strength, lipid composition, lipid distribution in the vicinity of the protein, shape and amino acid composition of the protein, and its amino acid contents. The specificity of molecular interactions together with the cooperativity of multiple proteins induce and stabilize complex membrane shapes at the mesoscale. These shapes span a wide spectrum ranging from the spherical plasma membrane to the complex cisternae of the Golgi apparatus. Mapping the relation between the protein-induced deformations at the molecular scale and the resulting mesoscale morphologies is key to bridging cellular experiments across the various length scales. In this review, we focus on the theoretical and computational methods used to understand the phenomenology underlying protein-driven membrane remodeling. Interactions at the molecular scale can be computationally probed by all atom and coarse grained molecular dynamics (MD, CGMD), as well as dissipative particle dynamics (DPD) simulations, which we only describe in passing. We choose to focus on several continuum approaches extending the Canham - Helfrich elastic energy model for membranes to include the effect of curvature-inducing proteins and explore the conformational phase space of such systems. In this
Picard, G.; Schneider-Henriquez, J.E.; Fendler, J.H. )
1990-01-25
Two-exposure interferometric holograms have been shown to sensitively report ultrasmall-pressure (10 natm)-induced curvature changes in glyceryl monooleate (GMO) bilayer lipid membranes (BLMs). The number of concentric fringes observed, and hence the lateral distance between the plane of the Teflon and the BLM, increased linearly with increasing transmembrane pressure and led to a value of 1.1 {plus minus} 0.05 dyn/cm for the surface tension of the BLM. BLMs with appreciable Plateau-Gibbs borders have been shown to undergo nonuniform deformation; the bilayer portion is distorted less than the surrounding Plateau-Gibbs border upon the application of a transmembrane pressure gradient.
Curvature-Induced Bunch Self-Interaction for an Energy-Chirped Bunch in Magnetic Bends
Rui Li
2006-01-04
The curvature-induced bunch collective interaction in magnetic bends can be studied using effective forces in the canonical formulation of the coherent synchrotron radiation (CSR) effect. In this paper, for an electron distribution moving ultrarelativistically in a bending system, the dynamics of a particle in the electron distribution is derived from the Hamiltonian of the particle in terms of the bunch internal coordinates. The consequent Vlasov equation manifests explicitly how the phase space distribution is perturbed by the effective CSR forces. In particular, we study the impact of an initial linear energy chirp of the bunch on the behavior of the effective longitudinal CSR force, which arises due to the modification of the retardation relation as a result of the energy-chirping-induced longitudinal-horizontal correlation of the bunch distribution (bunch tilt) in dispersive regions.
Membrane nanotubes induced by aqueous phase separation and stabilized by spontaneous curvature
Li, Yanhong; Lipowsky, Reinhard; Dimova, Rumiana
2011-01-01
Tubular membrane structures are widespread in eukaryotic cells, but the mechanisms underlying their formation and stability are not well understood. Previous work has focused on tube extrusion from cells and model membranes under the application of external forces. Here, we present novel membrane/polymer systems, where stable tubes form in the absence of externally applied forces. Solutions of two water-soluble polymers, polyethylene glycol and dextran, were encapsulated in giant lipid vesicles, cell-size model systems. Hypertonic deflation induced phase separation of the enclosed solution. The excess membrane area created during the deflation process was stored in a large number of membrane nanotubes inside the vesicle. The tubes had a diameter below optical resolution and became visible only when fluorescently labeled. The tubes were rather stable: In the absence of external forces, they existed for several days. A theoretical analysis of the shapes of the deflated vesicles reveals that these shapes would be unstable if the membranes had no spontaneous curvature. Using the large separation of length scales between the tube diameter and the overall size of the vesicles, the spontaneous curvature can be calculated and is found to be about -1/(240 nm) for a certain range of polymer concentrations. The nanotubes could also be retracted back into the mother vesicle by increasing the membrane tension via micropipette aspiration of the vesicle. Membrane tubes, which can form and be retracted easily, should be relevant for lipid storage in cells. PMID:21383120
Gravitational induced particle production through a nonminimal curvature-matter coupling
NASA Astrophysics Data System (ADS)
Harko, Tiberiu; Lobo, Francisco S. N.; Mimoso, José P.; Pavón, Diego
2015-08-01
We consider the possibility of a gravitationally induced particle production through the mechanism of a nonminimal curvature-matter coupling. An interesting feature of this gravitational theory is that the divergence of the energy-momentum tensor is nonzero. As a first step in our study we reformulate the model in terms of an equivalent scalar-tensor theory, with two arbitrary potentials. By using the formalism of open thermodynamic systems, we interpret the energy balance equations in this gravitational theory from a thermodynamic point of view, as describing irreversible matter creation processes. The particle number creation rates, the creation pressure, and the entropy production rates are explicitly obtained as functions of the scalar field and its potentials, as well as of the matter Lagrangian. The temperature evolution laws of the newly created particles are also obtained. The cosmological implications of the model are briefly investigated, and it is shown that the late-time cosmic acceleration may be due to particle creation processes. Furthermore, it is also shown that due to the curvature-matter coupling, during the cosmological evolution a large amount of comoving entropy is also produced.
Muto, Keiya; Kamei, Noriyasu; Yoshida, Mia; Takayama, Kozo; Takeda-Morishita, Mariko
2016-06-01
Nasal vaccination is considered an attractive strategy to prevent the infection and spread of viruses. However, the vaccine formulations available on the market remain imperfect on account of their limited effectiveness. In the present study, we hypothesized that the nasal coadministration of antigens with cell-penetrating peptides promotes antigen delivery immune response in the nasal mucosa, thereby enhancing the production of mucosal IgA and systemic IgG. The levels of ovalbumin (OVA)-specific IgG and IgA in plasma and nasal perfusate, respectively, increased after 2 or 4 weeks on nasal coadministration of OVA with l- or d-penetratin, suggesting that OVA antigen was effectively delivered by penetratin to the nasal epithelium. An additional study demonstrated that the production of systemic IgG and nasal mucosal IgA against influenza A virus was specifically promoted by nasal coadministration of influenza A virus with d-penetratin. The results of this study suggested that cell-penetrating peptides are a promising tool for the delivery of vaccines to the nasal mucosa and for the subsequent dual stimulation of systemic and mucosal immune responses. PMID:27155764
Nielsen, Ebbe Juel Bech; Yoshida, Shinya; Kamei, Noriyasu; Iwamae, Ruisha; Khafagy, El-Sayed; Olsen, Jørgen; Rahbek, Ulrik Lytt; Pedersen, Betty Lomstein; Takayama, Kozo; Takeda-Morishita, Mariko
2014-09-10
Oral delivery of insulin is blocked by low intestinal absorption caused by the poor permeability of insulin across cellular membranes and the susceptibility to enzymatic degradation in the gastrointestinal tract. Cell-penetrating peptides (CPPs) have been investigated for a number of years as oral absorption enhancers for hydrophilic macromolecules. Penetratin, a cationic and amphipathic CPP, effectively enhances insulin absorption and we were able to alleviate the enzymatic barrier by using the enzymatic resistant D-form of penetratin. In this study, mice were dosed orally with a physical mixture of insulin and penetratin. Blood glucose concentrations were measured and a pharmacological availability (PA) of 18.2% was achieved in mice dosed with insulin and D-penetratin. Following the promising data, we investigated the degradation parameters of insulin and penetratin in rat intestinal fluid. As expected, L-penetratin was degraded rapidly whereas D-penetratin had a halflife of 67±7min in 10-fold diluted gastrointestinal fluid. Insulin degradation was slowed by the presence of penetratin in intestinal fluid. The half-life of insulin increased from 24.9±4.5min to 55.6±14min and 90.5±11.8min in the presence of L- and D-penetratin respectively. In conclusion, both Land D-penetratin acted as oral absorption enhancers at select CPP concentrations for insulin and the current study is the first solid evidence of pharmacological activity of oral insulin delivery systems based on non-covalent intermolecular interactions with penetratin. PMID:24973720
Curvature-Induced Bunch Self-Interaction for an Energy-Chirped Bunch in Magnetic Bends
Li, Rui
2008-02-01
Within the realm of classical electrodynamics, the curvature-induced bunch collective interaction in magnetic bends can be studied using effective forces in the canonical formulation of the coherent synchrotron radiation (CSR) effect. As an application of this canonical formulation, in this paper, for an electron distribution moving ultrarelativistically in a bending system, the dynamics of the particles in the distribution is derived from the Hamiltonian of the particles in terms of the bunch internal coordinates. The consequent Vlasov equation manifests explicitly how the phase-space distribution is perturbed by the effective CSR forces. In particular, we study the impact of an initial linear energy chirp of the bunch on the behavior of the effective longitudinal CSR force, which arises due to the modification of the retardation relation as a result of the energy-chirping- induced longitudinal-horizontal correlation of the bunch distribution (bunch tilt) in dispersive regions. Our study demonstrates clearly the time delay (or retardation) of the behavior of the effective longitudinal CSR force on a bunch in responding to the change of the bunch length in a magnetic bend. Our result also shows that the effective longitudinal CSR force for a bunch under full compression can have sensitive dependence on the transverse position of the test particle in the bunch for certain parameter regimes.
Curvature-induced crosshatched order in two-dimensional semiflexible polymer networks
NASA Astrophysics Data System (ADS)
Vrusch, Cyril; Storm, Cornelis
2015-12-01
A recurring motif in the organization of biological tissues are networks of long, fibrillar protein strands effectively confined to cylindrical surfaces. Often, the fibers in such curved, quasi-two-dimensional (2D) geometries adopt a characteristic order: the fibers wrap around the central axis at an angle which varies with radius and, in several cases, is strongly bimodally distributed. In this Rapid Communication, we investigate the general problem of a 2D crosslinked network of semiflexible fibers confined to a cylindrical substrate, and demonstrate that in such systems the trade-off between bending and stretching energies, very generically, gives rise to crosshatched order. We discuss its general dependency on the radius of the confining cylinder, and present an intuitive model that illustrates the basic physical principle of curvature-induced order. Our findings shed new light on the potential origin of some curiously universal fiber orientational distributions in tissue biology, and suggests novel ways in which synthetic polymeric soft materials may be instructed or programmed to exhibit preselected macromolecular ordering.
Endoplasmatic reticulum shaping by generic mechanisms and protein-induced spontaneous curvature.
Sackmann, Erich
2014-06-01
The endoplasmatic reticulum (ER) comprises flattened vesicles (cisternae) with worm holes dubbed with ribosomes coexisting with a network of interconnected tubes which can extend to the cell periphery or even penetrate nerve axons. The coexisting topologies enclose a continuous luminal space. The complex ER topology is specifically controlled by a group of ER-shaping proteins often called reticulons (discovered by the group of Tom Rapoport). They include atlastin, reticulon, REEP and the MT severing protein spastin. A generic ER shape controlling factor is the necessity to maximize the area-to-volume ratio of ER membranes in the highly crowded cytoplasmic space. I present a model of the ER-shaping function of the reticulons based on the Helfrich bending elasticity concept of soft shell shape changes. Common structural motifs of the reticulons are hydrophobic sequences forming wedge shaped hairpins which penetrate the lipid bilayer of the cell membranes. The wedge-like hydrophobic anchors can both induce the high curvature of the tubular ER fraction and ensure the preferred distribution of the reticulons along the tubules. Tubular junctions may be stabilized by the reticulons forming two forceps twisted by 90°. The ER extensions to the cell periphery and the axons are mediated by coupling of the tubes to the microtubules which is mediated by REEP and spastin. At the end I present a model of the tension driven homotype fusion of ER-membranes by atlastin, based on analogies to the SNARE-complexin-SNARE driven heterotype fusion process. PMID:24607001
Second Variation of Induced Curvature Term in Brane-World Action
NASA Astrophysics Data System (ADS)
Iofa, Mikhail Z.
In a 5D spacetime with a 3-brane embedded we calculate the second variation of the scalar 4D curvature term on the brane under variations of the 5D metric. It is shown that the second variation of the 4D scalar curvature term in adapted coordinates is expressed only through variations of the components of the 5D metric with 4D indices.
Yin, Tiantian; Xie, Wenjie; Sun, Jing; Yang, Licong; Liu, Jie
2016-08-01
The structural changes of amyloid-beta (Aβ) from nontoxic monomers into neurotoxic aggregates are implicated with pathogenesis of Alzheimer's disease (AD). Over the past decades, weak disaggregation ability and low permeability to the blood-brain barrier (BBB) may be the main obstacles for major Aβ aggregation blockers. Here, we synthesized penetratin (Pen) peptide loaded poly(ethylene glycol) (PEG)-stabilized gold nanostars (AuNS) modified with ruthenium complex (Ru@Pen@PEG-AuNS), and Ru(II) complex as luminescent probes for tracking drug delivery. We revealed that Ru@Pen@PEG-AuNS could obviously inhibit the formation of Aβ fibrils as well as dissociate preformed fibrous Aβ under the irradiation of near-infrared (NIR) due to the NIR absorption characteristic of AuNS. More importantly, this novel design could be applied in medicine as an appropriate nanovehicle, being highly biocompatible and hemocompatible. In addition, Ru@Pen@PEG-AuNS had excellent neuroprotective effect on the Aβ-induced cellular toxicity by applying NIR irradiation. Meanwhile, Pen peptide could effectively improve the delivery of nanoparticles to the brain in vitro and in vivo, which overcame the major limitation of Aβ aggregation blockers. These consequences illustrated that the enhanced BBB permeability and efficient photothermolysis of Ru@Pen@PEG-AuNS are promising agents in AD therapy. PMID:27411476
Pannuzzo, Martina; Raudino, Antonio; Böckmann, Rainer A
2014-07-14
Peptide- or protein-induced curvatures of lipid membranes may be studied in molecular dynamics (MD) simulations. In these, membranes are usually modeled as infinitely extended bilayers by using periodic boundary conditions. However, the enforced periodicity results in an underestimation of the bending power of peptides, unless the patch size is much larger than the induced curvature radii. In this letter, we propose a novel approach to evaluate the bending power of a given distribution and/or density of peptides based on the use of flat open-edged lipid patches. To ensure long-lived metastable structures, the patch rim is stabilized in MD simulations by a local enrichment with short-chain lipids. By combining the theory of continuum elastic media with MD simulations, we prove that open-edged patches evolve from a planar state to a closed vesicle, with a transition rate that strongly depends on the concentration of lipid soluble peptides. For close-to-critical values for the patch size and edge energy, the response to even small changes in peptide concentration adopts a transition-like behavior (buckling instability). The usage of open-edged membrane patches amplifies the bending power of peptides, thereby enabling the analysis of the structural properties of membrane-peptide systems. We applied the presented method to investigate the curvature induced by aggregating β -amyloid peptides, unraveling a strong sensitivity of membrane deformation to the peptide concentration. PMID:25028040
NASA Astrophysics Data System (ADS)
Pannuzzo, Martina; Raudino, Antonio; Böckmann, Rainer A.
2014-07-01
Peptide- or protein-induced curvatures of lipid membranes may be studied in molecular dynamics (MD) simulations. In these, membranes are usually modeled as infinitely extended bilayers by using periodic boundary conditions. However, the enforced periodicity results in an underestimation of the bending power of peptides, unless the patch size is much larger than the induced curvature radii. In this letter, we propose a novel approach to evaluate the bending power of a given distribution and/or density of peptides based on the use of flat open-edged lipid patches. To ensure long-lived metastable structures, the patch rim is stabilized in MD simulations by a local enrichment with short-chain lipids. By combining the theory of continuum elastic media with MD simulations, we prove that open-edged patches evolve from a planar state to a closed vesicle, with a transition rate that strongly depends on the concentration of lipid soluble peptides. For close-to-critical values for the patch size and edge energy, the response to even small changes in peptide concentration adopts a transition-like behavior (buckling instability). The usage of open-edged membrane patches amplifies the bending power of peptides, thereby enabling the analysis of the structural properties of membrane-peptide systems. We applied the presented method to investigate the curvature induced by aggregating β -amyloid peptides, unraveling a strong sensitivity of membrane deformation to the peptide concentration.
Curvature-Induced Anomalous Enhancement in the Work Function of Nanostructures.
Kaur, Jasmin; Kant, Rama
2015-08-01
An analytical theory to estimate the electronic work function in curved geometries is formulated under Thomas-Fermi approximation. The work function is framed as the work against the electrostatic self-capacitive energy. The contribution of surface curvature is characterized by mean and Gaussian curvature (through multiple scattering expansion). The variation in work function of metal and semimetal nanostructures is shown as the consequence of surface radius of curvature comparable to electronic screening length. For ellipsoidal particles, the maximum value of work function is observed at the equator and poles for oblate and prolate particles, respectively, whereas triaxial ellipsoid shows nonuniform distribution of the work function over the surface. Similarly, theory predicts manifold increase in the work function for a particle with atomic scale roughness. Finally, the theory is validated with experimental data, and it is concluded that the work function of a nanoparticle can be tailored through its shape. PMID:26267172
Spatial Control of Epsin-induced Clathrin Assembly by Membrane Curvature.
Holkar, Sachin S; Kamerkar, Sukrut C; Pucadyil, Thomas J
2015-06-01
Epsins belong to the family of highly conserved clathrin-associated sorting proteins that are indispensable for clathrin-mediated endocytosis, but their precise functions remain unclear. We have developed an assay system of budded supported membrane tubes displaying planar and highly curved membrane surfaces to analyze intrinsic membrane curvature preference shown by clathrin-associated sorting proteins. Using real-time fluorescence microscopy, we find that epsin preferentially partitions to and assembles clathrin on highly curved membrane surfaces. Sorting of epsin to regions of high curvature strictly depends on binding to phosphatidylinositol 4,5-bisphosphate. Fluorescently labeled clathrins rapidly assemble as foci, which in turn cluster epsin, while maintaining tube integrity. Clathrin foci grow in intensity with a typical time constant of ∼75 s, similar to the time scales for coated pit formation seen in cells. Epsin therefore effectively senses membrane curvature to spatially control clathrin assembly. Our results highlight the potential role of membrane curvature in orchestrating the myriad molecular interactions necessary for the success of clathrin-mediated membrane budding. PMID:25837255
Spatial Control of Epsin-induced Clathrin Assembly by Membrane Curvature*♦
Holkar, Sachin S.; Kamerkar, Sukrut C.; Pucadyil, Thomas J.
2015-01-01
Epsins belong to the family of highly conserved clathrin-associated sorting proteins that are indispensable for clathrin-mediated endocytosis, but their precise functions remain unclear. We have developed an assay system of budded supported membrane tubes displaying planar and highly curved membrane surfaces to analyze intrinsic membrane curvature preference shown by clathrin-associated sorting proteins. Using real-time fluorescence microscopy, we find that epsin preferentially partitions to and assembles clathrin on highly curved membrane surfaces. Sorting of epsin to regions of high curvature strictly depends on binding to phosphatidylinositol 4,5-bisphosphate. Fluorescently labeled clathrins rapidly assemble as foci, which in turn cluster epsin, while maintaining tube integrity. Clathrin foci grow in intensity with a typical time constant of ∼75 s, similar to the time scales for coated pit formation seen in cells. Epsin therefore effectively senses membrane curvature to spatially control clathrin assembly. Our results highlight the potential role of membrane curvature in orchestrating the myriad molecular interactions necessary for the success of clathrin-mediated membrane budding. PMID:25837255
Chaudhary, Suman; Smith, Carol Anne; del Pino, Pablo; de la Fuente, Jesus M.; Mullin, Margaret; Hursthouse, Andrew; Stirling, David; Berry, Catherine C.
2013-01-01
Nanotechnology plays an increasingly important role in the biomedical arena. In particular, magnetic nanoparticles (mNPs) have become important tools in molecular diagnostics, in vivo imaging and improved treatment of disease, with the ultimate aim of producing a more theranostic approach. Due to their small sizes, the nanoparticles can cross most of the biological barriers such as the blood vessels and the blood brain barrier, thus providing ubiquitous access to most tissues. In all biomedical applications maximum nanoparticle uptake into cells is required. Two promising methods employed to this end include functionalization of mNPs with cell-penetrating peptides to promote efficient translocation of cargo into the cell and the use of external magnetic fields for enhanced delivery. This study aimed to compare the effect of both penetratin and a static magnetic field with regards to the cellular uptake of 200 nm magnetic NPs and determine the route of uptake by both methods. Results demonstrated that both techniques increased particle uptake, with penetratin proving more cell specific. Clathrin- medicated endocytosis appeared to be responsible for uptake as shown via PCR and western blot, with Pitstop 2 (known to selectively block clathrin formation) blocking particle uptake. Interestingly, it was further shown that a magnetic field was able to reverse or overcome the blocking, suggesting an alternative route of uptake. PMID:24275948
Vaccine delivery by penetratin: mechanism of antigen presentation by dendritic cells.
Pouniotis, Dodie; Tang, Choon-Kit; Apostolopoulos, Vasso; Pietersz, Geoffrey
2016-08-01
Cell-penetrating peptides (CPP) or membrane-translocating peptides such as penetratin from Antennapedia homeodomain or TAT from human immunodeficiency virus are useful vectors for the delivery of protein antigens or their cytotoxic (Tc) or helper (Th) T cell epitopes to antigen-presenting cells. Mice immunized with CPP containing immunogens elicit antigen-specific Tc and/or Th responses and could be protected from tumor challenges. In the present paper, we investigate the mechanism of class I and class II antigen presentation of ovalbumin covalently linked to penetratin (AntpOVA) by bone marrow-derived dendritic cells with the use of biochemical inhibitors of various pathways of antigen processing and presentation. Results from our study suggested that uptake of AntpOVA is via a combination of energy-independent (membrane fusion) and energy-dependent pathways (endocytosis). Once internalized by either mechanism, multiple tap-dependent or independent antigen presentation pathways are accessed while not completely dependent on proteasomal processing but involving proteolytic trimming in the ER and Golgi compartments. Our study provides an understanding on the mechanism of antigen presentation mediated by CPP and leads to greater insights into future development of vaccine formulations. PMID:27138940
NASA Astrophysics Data System (ADS)
Lowengrub, John; Allard, Jun; Aland, Sebastian
2016-03-01
The formation of membrane vesicles from a larger membrane that occurs during endocytosis and other cell processes is typically orchestrated by curvature-inducing molecules attached to the membrane. Recent reports demonstrate that vesicles can form de novo in a few milliseconds. Membrane dynamics at these scales are strongly influenced by hydrodynamic interactions. To study this problem, we develop new diffuse interface models for the dynamics of inextensible vesicles in a viscous fluid with stiff, curvature-inducing molecules. The model couples the Navier-Stokes equations with membrane-induced bending forces that incorporate concentration-dependent bending stiffness coefficients and spontaneous curvatures, with equations for molecule transport and for a Lagrange multiplier to enforce local inextensibility. Two forms of surface transport equations are considered: Fickian surface diffusion and Cahn-Hilliard surface dynamics, with the former being more appropriate for small molecules and the latter being better for large molecules. The system is solved using adaptive finite element methods in 3D axisymmetric geometries. The results demonstrate that hydrodynamics can indeed enable the rapid formation of a small vesicle attached to the membrane by a narrow neck. When the Fickian model is used, this is a transient state with the steady state being a flat membrane with a uniformly distributed molecule concentration due to diffusion. When the Cahn-Hilliard model is used, molecule concentration gradients are sustained, the neck stabilizes and the system evolves to a steady-state with a small, compact vesicle attached to the membrane. By varying the membrane coverage of molecules in the Cahn-Hilliard model, we find that there is a critical (smallest) neck radius and a critical (fastest) budding time. These critical points are associated with changes in the vesicle morphology from spherical to mushroom-like as the molecule coverage on the membrane is increased.
H2O adsorption-induced curvature of a silicon nanocantilever based on a semi-continuum method
NASA Astrophysics Data System (ADS)
Li, Bing; Huang, Qing-An
2013-10-01
Nano-sized silicon cantilevers have been widely studied in nanoelectromechanical systems (NEMS) because of their simplicity and ability to function in small sizes as sensors. The nanocantilever bends when adsorption is confined to a single side of the cantilever, and small molecule adsorption on the surface of the cantilever will directly cause its mechanical bending due to surface stress induced by intermolecular forces. When the cantilever is scaled down to nano level, the classical mechanical theory cannot be used to accurately model, analyze and predict its bending. And, native oxide may be unintentionally formed on the silicon nanocantilever of both sides during fabrication. In this paper, based on a semi-continuum method, a model is proposed to calculate H2O adsorption-induced curvature of the silicon nanocantilever with native oxide. According to the energy transfer between potential energy of adsorbates and elastic energy of the bending cantilever, the beam deflection is determined by using the energy theory in which the total energy in terms of beam curvature will reach a minimum value when the adsorption is stable. The model was tested with the molecular dynamics method using Material Studio software. The results agree with theoretical prediction. This model could be a simple method to analyze and estimate adsorption-induced bending of the nanocantilever.
Self-assembled penetratin-deferasirox micelles as potential carriers for hydrophobic drug delivery.
Goswami, Dibakar; Vitorino, Hector Aguilar; Machini, M Teresa; Espósito, Breno P
2015-11-01
There has been a growing interest in the use of micelles with nanofiber geometry as nanocarriers for hydrophobic drugs. Here we show that the conjugate of penetratin, a cell-penetrating peptide (CPP) with blood-brain barrier (BBB) permeability, and deferasirox (DFX), a hydrophobic iron chelator, self-assembles to form micelles at a very low concentration (∼15 mg/L). The critical micelle concentration (CMC) was determined, and the micelles were used for solubilizing curcumin, a hydrophobic anti-neurodegenerative drug, for successful delivery across RBE4 cells, a BBB model. Transmission Electron Microscope images of the curcumin-loaded micelles confirmed the formation of nanofibers. These results indicate the potential of CPP-drug conjugates for use as nanocarriers. PMID:25973759
A proapoptotic peptide conjugated to penetratin selectively inhibits tumor cell growth.
Alves, Isabel D; Carré, Manon; Montero, Marie-Pierre; Castano, Sabine; Lecomte, Sophie; Marquant, Rodrigue; Lecorché, Pascaline; Burlina, Fabienne; Schatz, Christophe; Sagan, Sandrine; Chassaing, Gérard; Braguer, Diane; Lavielle, Solange
2014-08-01
The peptide KLA (acetyl-(KLAKLAK)2-NH2), which is rather non toxic for eukaryotic cell lines, becomes active when coupled to the cell penetrating peptide, penetratin (Pen), by a disulfide bridge. Remarkably, the conjugate KLA-Pen is cytotoxic, at low micromolar concentrations, against a panel of seven human tumor cell lines of various tissue origins, including cells resistant to conventional chemotherapy agents but not to normal human cell lines. Live microscopy on cells possessing fluorescent labeled mitochondria shows that in tumor cells, KLA-Pen had a strong impact on mitochondria tubular organization instantly resulting in their aggregation, while the unconjugated KLA and pen peptides had no effect. But, mitochondria in various normal cells were not affected by KLA-Pen. The interaction with membrane models of KLA-Pen, KLA and penetratin were studied using dynamic light scattering, calorimetry, plasmon resonance, circular dichroism and ATR-FTIR to unveil the mode of action of the conjugate. To understand the selectivity of the conjugate towards tumor cell lines and its action on mitochondria, lipid model systems composed of zwitterionic lipids were used as mimics of normal cell membranes and anionic lipids as mimics of tumor cell and mitochondria membrane. A very distinct mode of interaction with the two model systems was observed. KLA-Pen may exert its deleterious and selective action on cancer cells by the formation of pores with an oblique membrane orientation and establishment of important hydrophobic interactions. These results suggest that KLA-Pen could be a lead compound for the design of cancer therapeutics. PMID:24796502
Berry curvature induced nonlinear Hall effect in time-reversal invariant materials
NASA Astrophysics Data System (ADS)
Sodemann, Inti; Fu, Liang
2015-03-01
It is well-known that a non-vanishing Hall conductivity requires time-reversal symmetry breaking. However, in this work, we demonstrate that a Hall-like transverse current can occur in second-order response to an external electric field in a wide class of time-reversal invariant and inversion breaking materials. This nonlinear Hall effect arises from the dipole moment of the Berry curvature in momentum space, which generates a net anomalous velocity when the system is in a current-carrying state. We show that the nonlinear Hall coefficient is a rank-two pseudo-tensor, whose form is determined by point group symmetry. We will describe the optimal conditions and candidate materials to observe this effect. IS is supported by the Pappalardo Fellowship in Physics. LF is supported by DOE Office of Basic Energy Sciences, Division of Materials Sciences and Engineering under Award DE-SC0010526.
Virialisation-induced curvature as a physical explanation for dark energy
Roukema, Boudewijn F.; Ostrowski, Jan J.; Buchert, Thomas E-mail: Jan.Ostrowski@astro.uni.torun.pl
2013-10-01
The geometry of the dark energy and cold dark matter dominated cosmological model (ΛCDM) is commonly assumed to be given by a Friedmann-Lemaître-Robertson-Walker (FLRW) metric, i.e. it assumes homogeneity in the comoving spatial section. The homogeneity assumption fails most strongly at (i) small distance scales and (ii) recent epochs, implying that the FLRW approximation is most likely to fail at these scales. We use the virialisation fraction to quantify (i) and (ii), which approximately coincide with each other on the observational past light cone. For increasing time, the virialisation fraction increases above 10% at about the same redshift ( ∼ 1–3) at which Ω{sub Λ} grows above 10% ( ≈ 1.8). Thus, instead of non-zero Ω{sub Λ}, we propose an approximate, general-relativistic correction to the matter-dominated (Ω{sub m}; = 1,Ω{sub Λ} = 0), homogeneous metric (Einstein-de Sitter, EdS). A low-redshift effective matter-density parameter of Ω{sub m}{sup eff}(0) = 0.26±0.05 is inferred. Over redshifts 0 < z < 3, the distance modulus of the virialisation-corrected EdS model approximately matches the ΛCDM distance modulus. This rough approximation assumes ''old physics'' (general relativity), not ''new physics''. Thus, pending more detailed calculations, we strengthen the claim that ''dark energy'' should be considered as an artefact of emerging average curvature in the void-dominated Universe, via a novel approach that quantifies the relation between virialisation and average curvature evolution.
Curvature and ionization-induced reversible hydrogen storage in metalized hexagonal B36.
Liu, Chun-Sheng; Wang, Xiangfu; Ye, Xiao-Juan; Yan, Xiaohong; Zeng, Zhi
2014-11-21
The synthesis of quasiplanar boron clusters (B36) with a central hexagonal hole provides the first experimental evidence that a single-atomic-layer borophene with hexagonal vacancies is potentially viable [Z. Piazza, H. Hu, W. Li, Y. Zhao, J. Li, and L. S. Wang, Nat. Commun. 5, 3113 (2014)]. However, owing to the hexagonal holes, tunning the electronic and physical properties of B36 through chemical modifications is not fully understood. Based on (van der Waals corrected-) density functional theory, we show that Li adsorbed on B36 and B36 (-) clusters can serve as reversible hydrogen storage media. The present results indicate that the curvature and ionization of substrates can enhance the bond strength of Li due to the energetically favorable B 2p-Li 2p orbitals hybridization. Both the polarization mechanism and the orbital hybridization between H-s orbitals and Li-2s2p orbitals contribute to the adsorption of H2 molecules and the resulting adsorption energy lies between the physisorbed and chemisorbed states. Interestingly, the number of H2 in the hydrogen storage medium can be measured by the appearance of the negative differential resistance behavior at different bias voltage regions. Furthermore, the cluster-assembled hydrogen storage materials constructed by metalized B36 clusters do not cause a decrease in the number of adsorbed hydrogen molecules per Li. The system reported here is favorable for the reversible hydrogen adsorption/desorption at ambient conditions. PMID:25416890
Curvature and ionization-induced reversible hydrogen storage in metalized hexagonal B{sub 36}
Liu, Chun-Sheng Wang, Xiangfu; Yan, Xiaohong; Ye, Xiao-Juan; Zeng, Zhi
2014-11-21
The synthesis of quasiplanar boron clusters (B{sub 36}) with a central hexagonal hole provides the first experimental evidence that a single-atomic-layer borophene with hexagonal vacancies is potentially viable [Z. Piazza, H. Hu, W. Li, Y. Zhao, J. Li, and L. S. Wang, Nat. Commun. 5, 3113 (2014)]. However, owing to the hexagonal holes, tunning the electronic and physical properties of B{sub 36} through chemical modifications is not fully understood. Based on (van der Waals corrected-) density functional theory, we show that Li adsorbed on B{sub 36} and B{sub 36}{sup −} clusters can serve as reversible hydrogen storage media. The present results indicate that the curvature and ionization of substrates can enhance the bond strength of Li due to the energetically favorable B 2p-Li 2p orbitals hybridization. Both the polarization mechanism and the orbital hybridization between H-s orbitals and Li-2s2p orbitals contribute to the adsorption of H{sub 2} molecules and the resulting adsorption energy lies between the physisorbed and chemisorbed states. Interestingly, the number of H{sub 2} in the hydrogen storage medium can be measured by the appearance of the negative differential resistance behavior at different bias voltage regions. Furthermore, the cluster-assembled hydrogen storage materials constructed by metalized B{sub 36} clusters do not cause a decrease in the number of adsorbed hydrogen molecules per Li. The system reported here is favorable for the reversible hydrogen adsorption/desorption at ambient conditions.
NASA Technical Reports Server (NTRS)
Hasenstein, K. H.; Kuznetsov, O. A.
1999-01-01
Shoots of the lazy-2 mutant of tomato (Lycopersicon esculentum Mill., cv. Ailsa Craig) exhibit negative gravitropism in the dark, but respond positively gravitropically in (red) light. In order to test whether high-gradient magnetic fields (HGMFs) exert only ponderomotive effects on amyloplasts or affect other physiological processes, we induced magnetophoretic curvature in wild-type (WT) and lazy-2 mutant seedlings. Straight hypocotyls of 4-d-old plants were selected and the tips of their hooks were placed in an HGMF near the edge of a magnetized ferromagnetic wedge [grad (H2/2) approximately 10(9)-10(10) Oe2/cm] and mounted on a 1-rpm clinostat. After 4 h in the dark, 85% of WT hypocotyls and 67% of mutant hypocotyls curved toward the wedge. When the seedlings were exposed to red light for 1 h prior to and during the application of the HGMF, 78% of the WT seedlings curved toward the magnetic gradient, but the majority of the lazy-2 seedlings (75%) curved away from the stronger field area. Intracellular amyloplast displacement in the HGMF was similar for both varieties and resembled the displacement after horizontal reorientation. The WT showed a distinct graviresponse pattern depending on the orientation of the hook, even after excision of the apex. Application of HGMFs to decapitated hypocotyls resulted in curvature consistent with that obtained after horizontal reorientation. After light exposure, decapitated lazy-2 seedlings did not respond positively gravitropically. The data imply that the lazy-2 mutants perceive the displacement of amyloplasts in a similar manner to the WT and that the HGMF does not affect the graviresponse mechanism. The study demonstrates that ponderomotive forces due to HGMFs are useful for the analysis of the gravity-sensing mechanism in plants.
Watahiki, M K; Yamamoto, K T
1997-10-01
Unilateral application of indole-3-acetic acid (IAA) in a lanolin base to hypocotyls of partially etiolated seedlings of wild-type Arabidopsis thaliana induced growth curvature in a dose-dependent manner. The effects of IAA in concentrations from 1 to 1000 microM were studied, with maximum IAA-induced curvature at 100 microM. Three IAA-insensitive mutants were isolated and are all in the same locus, massugu1 (msg1). They did not undergo hypocotyl growth curvature at any of the IAA concentrations tested. msg1 is recessive and is located on chromosome 5. msg 1 hypocotyl growth is resistant to 2,4-dichlorophenoxyacetic acid (2,4-D), but the roots are as sensitive to 2,4-D as the wild type. Growth of the hypocotyl was inhibited to essentially the same extent as the wild type by 6-benzylaminopurine, abscisic acid, and 1-aminocyclopropane-1-carboxylate, an ethylene precursor. The msg1 leaves were also resistant to 2,4-D-induced chlorosis. The gravitropic response of the msg1 hypocotyl takes much more time to initiate and achieve the wild-type degree of curvature, whereas the msg1 roots responded normally to gravity. The mature plants and the etiolated seedlings of msg1 were generally wild type in appearance, except that their rosette leaves were either epinastic or hyponastic. msg1 is the first auxin-insensitive mutant in which it effects are mostly restricted to the hypocotyl and leaf, and msg1 also appears to be auxin specific. PMID:9342863
Kamei, Noriyasu; Aoyama, Yukina; Khafagy, El-Sayed; Henmi, Mao; Takeda-Morishita, Mariko
2015-08-01
Our recent studies have shown that the coadministration of cell-penetrating peptides (CPPs) is a potential strategy for oral delivery of peptide- and protein-based biopharmaceuticals. The intermolecular interaction between drug and CPP is an essential factor in the effective delivery of these drugs, but the characteristics of the interaction under the conditions of the intestinal lumen remain unknown. In this study, therefore, we examined the characteristics of binding of the amphipathic CPP penetratin to insulin and the efficiency of its enhancement of epithelial insulin transport at different pH and in simulated intestinal fluids (SIFs). The binding between insulin and penetratin was pH dependent and particularly decreased at pH 5.0. In addition, we clarified that the sodium taurocholate (NaTC) present in two types of SIF (fasted-state SIF [FaSSIF] and fed-state SIF [FeSSIF]) affected binding efficiency. However, the permeation of insulin through a Caco-2 cell monolayer was significantly facilitated by coincubation with l- or d-penetratin at various pH values. Moreover, the permeation-stimulating effect of l-penetratin was observed in FaSSIF containing NaTC and lecithin, but not in 3mM NaTC solution, suggesting that the presence of lecithin was the key factor in maintaining the ability of penetratin to enhance the intestinal absorption of biopharmaceuticals. This report describes the essential considerations for in vivo use and clinical application of a CPP-based oral delivery strategy. PMID:25960330
NASA Astrophysics Data System (ADS)
Tourdot, Richard W.; Ramakrishnan, N.; Baumgart, Tobias; Radhakrishnan, Ravi
2015-10-01
We investigate the phenomenon of protein-induced tubulation of lipid bilayer membranes within a continuum framework using Monte Carlo simulations coupled with the Widom insertion technique to compute excess chemical potentials. Tubular morphologies are spontaneously formed when the density and the curvature-field strength of the membrane-bound proteins exceed their respective thresholds and this transition is marked by a sharp drop in the excess chemical potential. We find that the planar to tubular transition can be described by a micellar model and that the corresponding free-energy barrier increases with an increase in the curvature-field strength (i.e., of protein-membrane interactions) and also with an increase in membrane tension.
Tourdot, Richard W; Ramakrishnan, N; Baumgart, Tobias; Radhakrishnan, Ravi
2015-10-01
We investigate the phenomenon of protein-induced tubulation of lipid bilayer membranes within a continuum framework using Monte Carlo simulations coupled with the Widom insertion technique to compute excess chemical potentials. Tubular morphologies are spontaneously formed when the density and the curvature-field strength of the membrane-bound proteins exceed their respective thresholds and this transition is marked by a sharp drop in the excess chemical potential. We find that the planar to tubular transition can be described by a micellar model and that the corresponding free-energy barrier increases with an increase in the curvature-field strength (i.e., of protein-membrane interactions) and also with an increase in membrane tension. PMID:26565280
Tourdot, Richard W.; Ramakrishnan, N.; Baumgart, Tobias; Radhakrishnan, Ravi
2016-01-01
We investigate the phenomenon of protein-induced tubulation of lipid bilayer membranes within a continuum framework using Monte Carlo simulations coupled with the Widom insertion technique to compute excess chemical potentials. Tubular morphologies are spontaneously formed when the density and the curvature-field strength of the membrane-bound proteins exceed their respective thresholds and this transition is marked by a sharp drop in the excess chemical potential. We find that the planar to tubular transition can be described by a micellar model and that the corresponding free-energy barrier increases with an increase in the curvature-field strength (i.e., of protein-membrane interactions) and also with an increase in membrane tension. PMID:26565280
Ogunyankin, Maria O; Huber, Dale L; Sasaki, Darryl Y; Longo, Marjorie L
2013-05-21
This work describes a technique for forming high-density arrays and patterns of membrane-bound proteins through binding to a curvature-organized compositional pattern of metal-chelating lipids (Cu(2+)-DOIDA or Cu(2+)-DSIDA). In this bottom-up approach, the underlying support is an e-beam formed, square lattice pattern of hemispheres. This curvature pattern sorts Cu(2+)-DOIDA to the 200 nm hemispherical lattice sites of a 600 nm × 600 nm unit cell in Ld - Lo phase separated lipid multibilayers. Binding of histidine-tagged green fluorescent protein (His-GFP) creates a high density array of His-GFP-bound pixels localized to the square lattice sites. In comparison, the negative pixel pattern is created by sorting Cu(2+)-DSIDA in Ld - Lβ' phase separated lipid multibilayers to the flat grid between the lattice sites followed by binding to His-GFP. Lattice defects in the His-GFP pattern lead to interesting features such as pattern circularity. We also observe defect-free arrays of His-GFP that demonstrate perfect arrays can be formed by this method suggesting the possibility of using this approach for the localization of various active molecules to form protein, DNA, or optically active molecular arrays. PMID:23642033
Takano, Kazunari; Toyooka, Kiminori; Suetsugu, Shiro
2008-01-01
Extended Fer-CIP4 homology (EFC)/FCH-BAR (F-BAR) domains generate and bind to tubular membrane structures of defined diameters that are involved in the formation and fission of endocytotic vesicles. Formin-binding protein 17 (FBP17) and Toca-1 contain EFC/F-BAR domains and bind to neural Wiskott–Aldrich syndrome protein (N-WASP), which links phosphatidylinositol (4,5)-bisphosphate (PIP2) and the Rho family GTPase Cdc42 to the Arp2/3 complex. The N-WASP–WASP-interacting protein (WIP) complex, a predominant form of N-WASP in cells, is known to be activated by Toca-1 and Cdc42. Here, we show that N-WASP–WIP complex-mediated actin polymerization is activated by phosphatidylserine-containing membranes depending on membrane curvature in the presence of Toca-1 or FBP17 and in the absence of Cdc42 and PIP2. Cdc42 further promoted the activation of actin polymerization by N-WASP–WIP. Toca-1 or FBP17 recruited N-WASP–WIP to the membrane. Conserved acidic residues near the SH3 domain of Toca-1 and FBP17 positioned the N-WASP–WIP to be spatially close to the membrane for activation of actin polymerization. Therefore, curvature-dependent actin polymerization is stimulated by spatially appropriate interactions of EFC/F-BAR proteins and the N-WASP–WIP complex with the membrane. PMID:18923421
Urade, Vikrant N; Bollmann, Luis; Kowalski, Jonathan D; Tate, Michael P; Hillhouse, Hugh W
2007-04-10
The double-gyroid phase of nanoporous silica films has been shown to possess facile mass-transport properties and may be used as a mold to fabricate a variety of highly ordered inverse double-gyroid metal and semiconductor films. This phase exists only over a very small region of the binary phase diagram for most surfactants, and it has been very difficult to synthesize metal oxide films with this structure by evaporation-induced self-assembly (EISA). Here, we show the interplay of the key parameters needed to synthesize these structures reproducibly and show that the interfacial curvature may be systematically controlled. Grazing angle of incidence small-angle X-ray scattering (GISAXS) is used to determine the structure and orientation of nanostructured silica films formed by EISA from dilute silica/(poly(ethylene oxide)-b-poly(propylene oxide)-b-alkyl) surfactant solutions. Four different highly ordered film structures are observed by changing only the concentration of the surfactant, the relative humidity during dip-coating, and the aging time of the solution prior to coating. The highly ordered films progress from rhombohedral (Rm) to 2D rectangular (c2m) to double-gyroid (distorted Iad) to lamellar systematically as interfacial curvature decreases. Under all experimental conditions investigated, increasing the aging time of the coating solution was found to decrease the interfacial curvature. In particular, this parameter was critical to being able to synthesize highly ordered, pure-phase double-gyroid films. The key role of the aging time is shown via processing diagrams that map out the interplay between the aging time, composition, and relative humidity. 29Si nuclear magnetic resonance (NMR) spectroscopy and solution-phase small-angle X-ray scattering (SAXS) of the aged coating solutions presented in part I of this series are then used to interpret the effects of aging prior to dip-coating. Specifically, it was found that a predictive model based on volume
Chrometzka, P
1967-12-01
1. High atmospheric pressure causes an increase of the 3-indoleacetic-acid-induced curvature of Avena coleoptiles in the Went-test, regardless of whether the applied gas is nitrogen, hydrogen, oxygen, or air. 2. The highest increase was caused by high pressure of oxygen, the lowest by lack of oxygen. 3. The high pressure effect was also observed with coleoptiles which were treated 20 hours prior to the test and which were then kept under normal pressure. 4. High pressure of oxygen for a long period (20 hours) had a poisonous effect on the coleoptiles. They ceased to grow. Preliminary studies have shown that the respiration is enhanced if the coleoptiles have been kept under high pressure. PMID:24554325
NASA Astrophysics Data System (ADS)
Liu, Ruiwen; Jiao, Binbin; Kong, Yanmei; Li, Zhigang; Shang, Haiping; Lu, Dike; Gao, Chaoqun; Chen, Dapeng
2013-09-01
Micro-devices with a bi-material-cantilever (BMC) commonly suffer initial curvature due to the mismatch of residual stress. Traditional corrective methods to reduce the residual stress mismatch generally involve the development of different material deposition recipes. In this paper, a new method for reducing residual stress mismatch in a BMC is proposed based on various previously developed deposition recipes. An initial material film is deposited using two or more developed deposition recipes. This first film is designed to introduce a stepped stress gradient, which is then balanced by overlapping a second material film on the first and using appropriate deposition recipes to form a nearly stress-balanced structure. A theoretical model is proposed based on both the moment balance principle and total equal strain at the interface of two adjacent layers. Experimental results and analytical models suggest that the proposed method is effective in producing multi-layer micro cantilevers that display balanced residual stresses. The method provides a generic solution to the problem of mismatched initial stresses which universally exists in micro-electro-mechanical systems (MEMS) devices based on a BMC. Moreover, the method can be incorporated into a MEMS design automation package for efficient design of various multiple material layer devices from MEMS material library and developed deposition recipes.
Spatial curvature, spacetime curvature, and gravity
NASA Astrophysics Data System (ADS)
Price, Richard H.
2016-08-01
The belief that curved spacetime gravity cannot be simply and correctly presented results in such misleading presentations as elastic two-dimensional sheets deformed as they support heavy objects. This article attempts to show that the conceptual basis of curved spacetime gravity can be simply and correctly presented, and that the spatial curvature of a deformed elastic sheet is very different from the spacetime curvature underlying gravity. This article introduces the idea of a "splittable" spacetime that has spatial curvature, but is missing most of the manifestations of gravity. A section in which no mathematics is used is directed at students who have studied no more than introductory physics. A separate section, for students who have taken only an introductory course in general relativity, gives mathematical arguments centering on splittable spacetimes.
Ngamskulrungroj, Popchai; Chang, Yun; Hansen, Bryan; Bugge, Cliff; Fischer, Elizabeth; Kwon-Chung, Kyung J.
2012-01-01
Cryptococcus neoformans, an opportunistic fungal pathogen, manifests an intrinsic adaptive mechanism of resistance toward fluconazole (FLC) termed heteroresistance. Heteroresistance is characterized by the emergence of minor resistant subpopulations at levels of FLC that are higher than the strain’s minimum inhibitory concentration. The heteroresistant clones that tolerate high concentrations of FLC often contain disomic chromosome 4 (Chr4). SEY1, GLO3 and GCS2 on Chr4 are responsible for ER integrity and important for Chr4 disomy formation under FLC stress. We sought an evidence of a direct relationship between ER morphology and Chr4 disomy formation. Deletion of the YOP1 gene on Chr7, which encodes an ER curvature-stabilizing protein that interacts with Sey1, perturbed ER morphology without affecting FLC susceptibility or the frequency of FLC-induced disomies. However, deletion of both YOP1 and SEY1, not only perturbed ER morphology more severely than in sey1Δ or yop1Δ strains but also abrogated the FLC-induced disomy. Although the heteroresistance phenotype was retained in the sey1Δyop1Δ strains, tolerance to FLC appeared to have resulted not from chromosome duplication but from gene amplification restricted to the region surrounding ERG11 on Chr1. These data support the importance of ER integrity in C. neoformans for the formation of disomy under FLC stress. PMID:22731401
Curvature-undulation coupling as a basis for curvature sensing and generation in bilayer membranes.
Bradley, Ryan P; Radhakrishnan, Ravi
2016-08-30
We present coarse-grained molecular dynamics simulations of the epsin N-terminal homology domain interacting with a lipid bilayer and demonstrate a rigorous theoretical formalism and analysis method for computing the induced curvature field in varying concentrations of the protein in the dilute limit. Our theory is based on the description of the height-height undulation spectrum in the presence of a curvature field. We formulated an objective function to compare the acquired undulation spectrum from the simulations to that of the theory. We recover the curvature field parameters by minimizing the objective function even in the limit where the protein-induced membrane curvature is of the same order as the amplitude due to thermal undulations. The coupling between curvature and undulations leads to significant predictions: (i) Under dilute conditions, the proteins can sense a site of spontaneous curvature at distances much larger than their size; (ii) as the density of proteins increases the coupling focuses and stabilizes the curvature field to the site of the proteins; and (iii) the mapping of the protein localization and the induction of a stable curvature is a cooperative process that can be described through a Hill function. PMID:27531962
Curvature of the penis is an abnormal bend in the penis that occurs during erection. It is also called Peyronie's disease. ... tissue develops in the deep tissues of the penis. The cause of this fibrous tissue is often ...
Krauss, Michael; Jia, Jun-Yong; Roux, Aurélien; Beck, Rainer; Wieland, Felix T.; De Camilli, Pietro; Haucke, Volker
2008-01-01
ADP-ribosylation factor (Arf) and related small GTPases play crucial roles in membrane traffic within the exo- and endocytic pathways. Arf proteins in their GTP-bound state are associated with curved membrane buds and tubules, frequently together with effector coat proteins to which they bind. Here we report that Arf1 is found on membrane tubules originating from the Golgi complex where it colocalizes with COPI and GGA1 vesicle coat proteins. Arf1 also induces tubulation of liposomes in vitro. Mutations within the amino-terminal amphipathic helix (NTH) of Arf1 affect the number of Arf1-positive tubules in vivo and its property to tubulate liposomes. Moreover, hydrophilic substitutions within the hydrophobic part of its NTH impair Arf1-catalyzed budding of COPI vesicles in vitro. Our data indicate that GTP-controlled local induction of high curvature membranes is an important property of Arf1 that might be shared by a subgroup of Arf/Arl family GTPases. PMID:18693248
NASA Technical Reports Server (NTRS)
Dolgin, Benjamin P.
1992-01-01
Calculations are presented of the coefficient of thermal expansion (CTE) of the radius of curvature of the reflector face sheets made of a quasi-isotropic composite. It is shown that, upon cooling, the change of the CTE of the focal distance of the mirror is equal to that of the radius of the curvature of the reflector face sheet. The CTE of the radius of the curvature of a quasi-isotropic composite face sheet depends on both the in-plane and the out-of-plane CTEs. The zero in-plane CTE of a face sheet does not guarantee mirrors with no focal length changes.
Bollmann, Luis; Urade, Vikrant N; Hillhouse, Hugh W
2007-04-10
The double-gyroid phase of nanoporous silica films formed by evaporation-induced self-assembly (EISA) has been shown to possess facile mass-transport properties and may be used as a robust template for the nanofabrication of metal and semiconductor nanostructures. Recently, we developed a new synthesis of double-gyroid nanoporous silica films where the aging time of the coating solution prior to EISA was the key parameter required to control the interfacial curvature that results upon self-assembly of the film. Here, we use 29Si nuclear magnetic resonance (NMR) and small-angle X-ray scattering (SAXS) to investigate the nanoscale structure of the coating solutions used to obtain double-gyroid nanoporous silica films. NMR and SAXS were carried out on the water, ethanol, silica, and poly(ethylene oxide)-b-poly(propylene oxide)-b-alkyl (EO17-PO12-C14) surfactant coating solutions as well as similar solutions that excluded either the silica or the surfactant. NMR data reveal that the silica monomers in the coating solution condense very rapidly to form rings and connected ring species. After 1 day of aging, all monomers and dimers have disappeared, and the distribution is dominated by Q2 and Q3 species, where the superscript in Qn describes the number of silicon atoms in the second coordination shell of the central silicon. Over the course of the next 9 days, the Q3 population slowly rises at the expense of the Q2 and Q3t populations. Absolute intensity SAXS measurements reveal that the size of the silica clusters increases steadily during this aging period, reaching an average radius of gyration of 9.0 A after 9 days of aging. Longer aging results in the continued growth of clusters with a mass fractal dimension of 1.8. Absolute intensity SAXS data also reveals that micelles are not present in the coating solution. At 9% volume fraction of surfactant, the coating solution is far above the aqueous critical micellar concentration. However, even a small amount of ethanol
Gravitropic basis of leaf blade nastic curvatures
NASA Technical Reports Server (NTRS)
Hayes, A. B.
1982-01-01
The curvatures produced in leaf blades by auxin treatment have been described as nastic curvatures because the initial differential growth is always enhanced on the lower side, regardless of the side of application. It is now known, however, that blades can show differential growth of either the upper or the lower side depending on the conditions of treatment. The dorsiventrality of the blade therefore influences but does not limit the direction of curvature. The dorsiventral directionality of response to growth regulators and the response to changes in the orientation to gravity are seen as indicating that blade curvatures are analogous to negative or positive gravitropism. It is noted that neither blade hyponasty or epinasty can be accounted for by ethylene alone. Petiole responses, however, are not directional, and the leaf angle changes induced by rotation or auxin treatment can be accounted for by ethylene production.
Anisotropic Membrane Curvature Sensing by Amphipathic Peptides.
Gómez-Llobregat, Jordi; Elías-Wolff, Federico; Lindén, Martin
2016-01-01
Many proteins and peptides have an intrinsic capacity to sense and induce membrane curvature, and play crucial roles for organizing and remodeling cell membranes. However, the molecular driving forces behind these processes are not well understood. Here, we describe an approach to study curvature sensing by simulating the interactions of single molecules with a buckled lipid bilayer. We analyze three amphipathic antimicrobial peptides, a class of membrane-associated molecules that specifically target and destabilize bacterial membranes, and find qualitatively different sensing characteristics that would be difficult to resolve with other methods. Our findings provide evidence for direction-dependent curvature sensing mechanisms in amphipathic peptides and challenge existing theories of hydrophobic insertion. The buckling approach is generally applicable to a wide range of curvature-sensing molecules, and our results provide strong motivation to develop new experimental methods to track position and orientation of membrane proteins. PMID:26745422
Curvature calculations with GEOCALC
NASA Astrophysics Data System (ADS)
Moussiaux, A.; Tombal, Ph.
1987-04-01
A new method for calculating the curvature tensor has been recently proposed by D. Hestenes. This method is a particular application of geometric calculus, which has been implemented in an algebraic programming language on the form of a package called GEOCALC. We show how to apply this package to the Schwarzchild case and we discuss the different results.
Curvature calculations with GEOCALC
Moussiaux, A.; Tombal, P.
1987-04-01
A new method for calculating the curvature tensor has been recently proposed by D. Hestenes. This method is a particular application of geometric calculus, which has been implemented in an algebraic programming language on the form of a package called GEOCALC. They show how to apply this package to the Schwarzchild case and they discuss the different results.
Wrinkles and splay conspire to give positive disclinations negative curvature.
Matsumoto, Elisabetta A; Vega, Daniel A; Pezzutti, Aldo D; García, Nicolás A; Chaikin, Paul M; Register, Richard A
2015-10-13
Recently, there has been renewed interest in the coupling between geometry and topological defects in crystalline and striped systems. Standard lore dictates that positive disclinations are associated with positive Gaussian curvature, whereas negative disclinations give rise to negative curvature. Here, we present a diblock copolymer system exhibiting a striped columnar phase that preferentially forms wrinkles perpendicular to the underlying stripes. In free-standing films this wrinkling behavior induces negative Gaussian curvature to form in the vicinity of positive disclinations. PMID:26420873
Wrinkles and splay conspire to give positive disclinations negative curvature
Matsumoto, Elisabetta A.; Vega, Daniel A.; Pezzutti, Aldo D.; García, Nicolás A.; Chaikin, Paul M.; Register, Richard A.
2015-01-01
Recently, there has been renewed interest in the coupling between geometry and topological defects in crystalline and striped systems. Standard lore dictates that positive disclinations are associated with positive Gaussian curvature, whereas negative disclinations give rise to negative curvature. Here, we present a diblock copolymer system exhibiting a striped columnar phase that preferentially forms wrinkles perpendicular to the underlying stripes. In free-standing films this wrinkling behavior induces negative Gaussian curvature to form in the vicinity of positive disclinations. PMID:26420873
Photon Drag Effect due to Berry Curvature
NASA Astrophysics Data System (ADS)
Kurosawa, Hiroyuki; Sawada, Kei; Ohno, Seigo
2016-08-01
A theoretical investigation reveals that the photon drag effect (PDE) is induced in a grating slab with deformation by the Berry curvature in phase space. It drifts the momentum of light, and gives asymmetric PDE signals in momentum space. Large PDE signals are observed even near the Γ point. This characteristic agrees well with our theoretical results.
Photon Drag Effect due to Berry Curvature.
Kurosawa, Hiroyuki; Sawada, Kei; Ohno, Seigo
2016-08-19
A theoretical investigation reveals that the photon drag effect (PDE) is induced in a grating slab with deformation by the Berry curvature in phase space. It drifts the momentum of light, and gives asymmetric PDE signals in momentum space. Large PDE signals are observed even near the Γ point. This characteristic agrees well with our theoretical results. PMID:27588858
Forman curvature for complex networks
NASA Astrophysics Data System (ADS)
Sreejith, R. P.; Mohanraj, Karthikeyan; Jost, Jürgen; Saucan, Emil; Samal, Areejit
2016-06-01
We adapt Forman’s discretization of Ricci curvature to the case of undirected networks, both weighted and unweighted, and investigate the measure in a variety of model and real-world networks. We find that most nodes and edges in model and real networks have a negative curvature. Furthermore, the distribution of Forman curvature of nodes and edges is narrow in random and small-world networks, while the distribution is broad in scale-free and real-world networks. In most networks, Forman curvature is found to display significant negative correlation with degree and centrality measures. However, Forman curvature is uncorrelated with clustering coefficient in most networks. Importantly, we find that both model and real networks are vulnerable to targeted deletion of nodes with highly negative Forman curvature. Our results suggest that Forman curvature can be employed to gain novel insights on the organization of complex networks.
Curvature perturbation and waterfall dynamics in hybrid inflation
Abolhasani, Ali Akbar; Firouzjahi, Hassan; Sasaki, Misao E-mail: firouz@mail.ipm.ir
2011-10-01
We investigate the parameter spaces of hybrid inflation model with special attention paid to the dynamics of waterfall field and curvature perturbations induced from its quantum fluctuations. Depending on the inflaton field value at the time of phase transition and the sharpness of the phase transition inflation can have multiple extended stages. We find that for models with mild phase transition the induced curvature perturbation from the waterfall field is too large to satisfy the COBE normalization. We investigate the model parameter space where the curvature perturbations from the waterfall quantum fluctuations vary between the results of standard hybrid inflation and the results obtained here.
Robust pupil center detection using a curvature algorithm
NASA Technical Reports Server (NTRS)
Zhu, D.; Moore, S. T.; Raphan, T.; Wall, C. C. (Principal Investigator)
1999-01-01
Determining the pupil center is fundamental for calculating eye orientation in video-based systems. Existing techniques are error prone and not robust because eyelids, eyelashes, corneal reflections or shadows in many instances occlude the pupil. We have developed a new algorithm which utilizes curvature characteristics of the pupil boundary to eliminate these artifacts. Pupil center is computed based solely on points related to the pupil boundary. For each boundary point, a curvature value is computed. Occlusion of the boundary induces characteristic peaks in the curvature function. Curvature values for normal pupil sizes were determined and a threshold was found which together with heuristics discriminated normal from abnormal curvature. Remaining boundary points were fit with an ellipse using a least squares error criterion. The center of the ellipse is an estimate of the pupil center. This technique is robust and accurately estimates pupil center with less than 40% of the pupil boundary points visible.
Novel imaging system for measuring microscale curvatures at high temperatures
NASA Astrophysics Data System (ADS)
Tada, Haruna; Kumpel, Amy E.; Lathrop, Richard E.; Slanina, John B.; Nieva, Patricia; Zavracky, Paul; Miaoulis, Ioannis N.; Wong, Peter Y.
2000-01-01
An innovative system was designed to optically measure the curvature of microelectromechanical system at high temperatures. The system takes advantage of the limited numerical aperture of the imaging system to detect the curvature of cantilever beams. Images of the beam are used to determine beam curvature at high temperatures of up to 850 °C by analyzing the apparent change in beam length as seen by the camera during an experimental trial. The system is designed to operate at very high temperatures, which is difficult in conventional microscale curvature measurement techniques such as scanning electron microscopy or stylus profilometry due to excess heating of peripheral equipment. The system can measure curvatures as small as 300 m-1, which corresponds to tip deflections of 1.5 μm for a 100 μm beam. The resolution of the system is limited by the image resolution of the charge-coupled device camera, and increases at large curvatures. The maximum curvature that can be measured by the system is limited by the increase in system resolution, and is estimated to be 4500 m-1, corresponding to 22 μm deflection for a 100 μm beam. The apparatus was demonstrated to measure the thermally induced curvature of multilayered thin-film cantilever beams. The beams bend at high temperatures due to mismatch in thermal expansion coefficients between the layers. One innovative application of such curvature measurement is the determination of thermophysical properties of thin films at elevated temperatures. This article presents the experimental setup and operational theory of apparatus, as well as curvature measurements obtained by the system. The thermal expansion coefficient of polycrystalline silicon, determined from the curvature measurements, are also discussed.
Cosmic curvature and condensation
NASA Technical Reports Server (NTRS)
Harwit, Martin
1992-01-01
It is shown that the universe may consist of a patchwork of domains with different Riemann curvature constants k = 0, +/-1. Features of a phase transition in which flat space breaks up in a transition 2k0 - k(-) + k(+) with initial scale factors R(-) = R(+) are postulated and explored. It is shown that such a transition is energetically permitted, has the equivalent of a Curie temperature, and can lead in a natural way to the formation of voids and galaxies. It is predicted that, if the ambient universe on average is well fitted by a purely k(-) space, with only occasional domains of k(+) containing galaxies, a density parameter of (A(z sub c + 1)) super -1 should be expected, where z sub c represents the redshift of the earliest objects to have condensed, and A takes on values ranging from about 5 to 3. Present observations of quasars would suggest a density of about 0.03 or 0.05, respectively, but it could be lower if earlier condensation took place.
Wallace, John Paul; Myneni, Ganapati Rao; Pike, Robert
2011-03-31
The manufacturing of niobium SRF accelerator cavities is plagued by a mobile point defect, hydrogen. For efficient accelerator operation, niobium must function at both high electric and magnetic fields, and is compromised if magnetic impurities are located in the surface regions of the material. The finding that trace hydrogen in niobium can produce structures with magnetic properties is a feature that is not acceptable for a high performance cavity. X-ray diffraction has proved to be the key tool in assessing irreversible process damage to the niobium substrate. In future generations of accelerators, niobium will actually be merely the substrate for more effective superconductors that will allow for more efficient operation. The substrate analogy to the silicon wafer industry is useful since for niobium it may be possible to avoid some of the mistakes made in silicon technology. Because hydrogen attacks niobium on a number of different size scales, there is an inherent complexity in the trouble sources. There are also features in cavity design that are benign, such as local curvature considerations, requiring a fully non symmetric analysis of current flow to be appreciated.
John Paul Wallace, Ganapati Rao Myneni, and Robert Pike
2011-03-01
The manufacturing of niobium SRF accelerator cavities is plagued by a mobile point defect, hydrogen. For efficient accelerator operation, niobium must function at both high electric and magnetic fields, and is compromised if magnetic impurities are located in the surface regions of the material. The finding that trace hydrogen in niobium can produce structures with magnetic properties is a feature that is not acceptable for a high performance cavity. X-ray diffraction has proved to be the key tool in assessing irreversible process damage to the niobium substrate. In future generations of accelerators, niobium will actually be merely the substrate for more effective superconductors that will allow for more efficient operation. The substrate analogy to the silicon wafer industry is useful since for niobium it may be possible to avoid some of the mistakes made in silicon technology. Because hydrogen attacks niobium on a number of different size scales, there is an inherent complexity in the trouble sources. There are also features in cavity design that are benign, such as local curvature considerations, requiring a fully non symmetric analysis of current flow to be appreciated.
Ionic liquid tunes microemulsion curvature.
Liu, Liping; Bauduin, Pierre; Zemb, Thomas; Eastoe, Julian; Hao, Jingcheng
2009-02-17
Middle-phase microemulsions formed from cationic dioctadecyldimethylammonium chloride (DODMAC), anionic sodium dodecylsulfate (SDS), n-butanol, and n-heptane were studied. An ionic liquid (IL), 1-butyl-3-methylimidazolium tetrafluoroborate ([bmim][BF4]), was employed as the electrolyte in the aqueous media instead of inorganic salts usually used in microemulsion formulation. Studies have been carried out as a function of the concentrations of [bmim][BF4], n-butanol, total surfactant (cDODMAC+SDS), and temperature on the phase behavior and the ultralow interfacial tensions in which the anionic component is present in excess in the catanionic film. Ultralow interfacial tension measurements confirmed the formation of middle-phase microemulsions and the necessary conditions for stabilizing middle-phase microemulsions. Electrical conductivity, small-angle X-ray scattering (SAXS), and small-angle neutron scattering (SANS) experiments were also performed, indicating that the typical heptane domain size has an average radius of 360 A and the ionic liquid induces softening of the charged catanionic film. Most interestingly, the IL concentration (cIL) is shown to act as an effective interfacial curvature-control parameter, representing a new approach to tuning the formulation of microemulsions and emulsions. The results expand the potential uses of ILs but also point to the design of new ILs that may achieve superefficient control over interfacial and self-assembly systems. PMID:19161325
Sigma models with negative curvature
NASA Astrophysics Data System (ADS)
Alonso, Rodrigo; Jenkins, Elizabeth E.; Manohar, Aneesh V.
2016-05-01
We construct Higgs Effective Field Theory (HEFT) based on the scalar manifold Hn, which is a hyperbolic space of constant negative curvature. The Lagrangian has a non-compact O (n , 1) global symmetry group, but it gives a unitary theory as long as only a compact subgroup of the global symmetry is gauged. Whether the HEFT manifold has positive or negative curvature can be tested by measuring the S-parameter, and the cross sections for longitudinal gauge boson and Higgs boson scattering, since the curvature (including its sign) determines deviations from Standard Model values.
Transformation optics, curvature and beyond (Conference Presentation)
NASA Astrophysics Data System (ADS)
McCall, Martin W.
2016-04-01
Although the transformation algorithm is very well established and implemented, some intriguing questions remain unanswered. 1) In what precise mathematical sense is the transformation optics algorithm `exact'? The invariance of Maxwell's equations is well understood, but in what sense does the same principle not apply to acoustics (say)? 2) Even if the fields are transformed in a way that apparently mimic vacuum perfectly, it is easy to construct very simple examples where the impedance of the transformed medium is no longer isotropic and homogeneous. This would seem to imply a fundamental shortcoming in any claim that electromagnetic cloaking has been reduced to technology. 3) Transformations are known to exist that introduce a discrepancy between the Poynting vector and the wave-vector. Does this distinction carry any physical significance? We have worked extensively on understanding a commonality between transformation theories that operates at the level of rays - being interpreted as geodesics of an appropriate manifold. At this level we now understand that the *key* problem underlying all attempts to unify the transformational approach to disparate areas of physics is how to relate the transformation of the base metric (be it Euclidean for spatial transformation optics, or Minkowskian for spacetime transformation optics) to the medium parameters of a given physical domain (e.g. constitutive parameters for electromagnetism, bulk modulus and mass density for acoustics, diffusion constant and number density for diffusion physics). Another misconception we will seek to address is the notion of the relationship between transformation optics and curvature. Many have indicated that transformation optics evinces similarities with Einstein's curvature of spacetime. Here we will show emphatically that transformation optics cannot induce curvature. Inducing curvature in an electromagnetic medium requires the equivalent of a gravitational source. We will propose a scheme
Boumann, Henry A.; Gubbens, Jacob; Koorengevel, Martijn C.; Oh, Chan-Seok; Martin, Charles E.; Heck, Albert J.R.; Patton-Vogt, Jana; Henry, Susan A.; de Kruijff, Ben; de Kroon, Anton I.P.M.
2006-01-01
To study the consequences of depleting the major membrane phospholipid phosphatidylcholine (PC), exponentially growing cells of a yeast cho2opi3 double deletion mutant were transferred from medium containing choline to choline-free medium. Cell growth did not cease until the PC level had dropped below 2% of total phospholipids after four to five generations. Increasing contents of phosphatidylethanolamine (PE) and phosphatidylinositol made up for the loss of PC. During PC depletion, the remaining PC was subject to acyl chain remodeling with monounsaturated species replacing diunsaturated species, as shown by mass spectrometry. The remodeling of PC did not require turnover by the SPO14-encoded phospholipase D. The changes in the PC species profile were found to reflect an overall shift in the cellular acyl chain composition that exhibited a 40% increase in the ratio of C16 over C18 acyl chains, and a 10% increase in the degree of saturation. The shift was stronger in the phospholipid than in the neutral lipid fraction and strongest in the species profile of PE. The shortening and increased saturation of the PE acyl chains were shown to decrease the nonbilayer propensity of PE. The results point to a regulatory mechanism in yeast that maintains intrinsic membrane curvature in an optimal range. PMID:16339082
Boumann, Henry A; Gubbens, Jacob; Koorengevel, Martijn C; Oh, Chan-Seok; Martin, Charles E; Heck, Albert J R; Patton-Vogt, Jana; Henry, Susan A; de Kruijff, Ben; de Kroon, Anton I P M
2006-02-01
To study the consequences of depleting the major membrane phospholipid phosphatidylcholine (PC), exponentially growing cells of a yeast cho2opi3 double deletion mutant were transferred from medium containing choline to choline-free medium. Cell growth did not cease until the PC level had dropped below 2% of total phospholipids after four to five generations. Increasing contents of phosphatidylethanolamine (PE) and phosphatidylinositol made up for the loss of PC. During PC depletion, the remaining PC was subject to acyl chain remodeling with monounsaturated species replacing diunsaturated species, as shown by mass spectrometry. The remodeling of PC did not require turnover by the SPO14-encoded phospholipase D. The changes in the PC species profile were found to reflect an overall shift in the cellular acyl chain composition that exhibited a 40% increase in the ratio of C16 over C18 acyl chains, and a 10% increase in the degree of saturation. The shift was stronger in the phospholipid than in the neutral lipid fraction and strongest in the species profile of PE. The shortening and increased saturation of the PE acyl chains were shown to decrease the nonbilayer propensity of PE. The results point to a regulatory mechanism in yeast that maintains intrinsic membrane curvature in an optimal range. PMID:16339082
Curvature calculations with spacetime algebra
Hestenes, D.
1986-06-01
A new method for calculating the curvature tensor is developed and applied to the Scharzschild case. The method employs Clifford algebra and has definite advantages over conventional methods using differential forms or tensor analysis.
On the Weyl curvature hypothesis
NASA Astrophysics Data System (ADS)
Stoica, Ovidiu Cristinel
2013-11-01
The Weyl curvature hypothesis of Penrose attempts to explain the high homogeneity and isotropy, and the very low entropy of the early universe, by conjecturing the vanishing of the Weyl tensor at the Big-Bang singularity.
MARCKS-ED Peptide as a Curvature and Lipid Sensor
Morton, Leslie A.; Yang, Hengwen; Saludes, Jonel P.; Fiorini, Zeno; Beninson, Lida; Chapman, Edwin R.; Fleshner, Monika; Xue, Ding; Yin, Hang
2012-01-01
Membrane curvature and lipid composition regulate important biological processes within a cell. Currently, several proteins have been reported to sense and/or induce membrane curvatures, e.g. Synaptotagmin-1 and Amphiphysin. However, the large protein scaffold of these curvature sensors limits their applications in complex biological systems. Our interest focuses on identifying and designing peptides that can sense membrane curvature based on established elements observed in natural curvature-sensing proteins. Membrane curvature remodeling also depends on their lipid composition, suggesting strategies to specifically target membrane shape and lipid components simultaneously. We have successfully identified a 25-mer peptide, MARCKS-ED, based on the effector domain sequence of the intracellular membrane protein myristoylated alanine-rich C-kinase substrate that can recognize PS with preferences for highly curved vesicles in a sequence specific manner. These studies further contribute to the understanding of how proteins and peptides sense membrane curvature, as well as provide potential probes for membrane shape and lipid composition. PMID:23075500
Influence of Coanda surface curvature on performance of bladeless fan
NASA Astrophysics Data System (ADS)
Li, Guoqi; Hu, Yongjun; Jin, Yingzi; Setoguchi, Toshiaki; Kim, Heuy Dong
2014-10-01
The unique Coanda surface has a great influence on the performance of bladeless fan. However, there is few studies to explain the relationship between the performance and Coanda surface curvature at present. In order to gain a qualitative understanding of effect of the curvature on the performance of bladeless fan, numerical studies are performed in this paper. Firstly, three-dimensional numerical simulation is done by Fluent software. For the purpose to obtain detailed information of the flow field around the Coanda surface, two-dimensional numerical simulation is also conducted. Five types of Coanda surfaces with different curvature are designed, and the flow behaviour and the performance of them are analyzed and compared with those of the prototype. The analysis indicates that the curvature of Coanda surface is strongly related to blowing performance, It is found that there is an optimal curvature of Coanda surfaces among the studied models. Simulation result shows that there is a special low pressure region. With increasing curvature in Y direction, several low pressure regions gradually enlarged, then begin to merge slowly, and finally form a large area of low pressure. From the analyses of streamlines and velocity angle, it is found that the magnitude of the curvature affects the flow direction and reasonable curvature can induce fluid flow close to the wall. Thus, it leads to that the curvature of the streamlines is consistent with that of Coanda surface. Meanwhile, it also causes the fluid movement towards the most suitable direction. This study will provide useful information to performance improvements of bladeless fans.
Spatial curvature endgame: Reaching the limit of curvature determination
NASA Astrophysics Data System (ADS)
Leonard, C. Danielle; Bull, Philip; Allison, Rupert
2016-07-01
Current constraints on spatial curvature show that it is dynamically negligible: |ΩK|≲5 ×10-3 (95% C.L.). Neglecting it as a cosmological parameter would be premature however, as more stringent constraints on ΩK at around the 10-4 level would offer valuable tests of eternal inflation models and probe novel large-scale structure phenomena. This precision also represents the "curvature floor," beyond which constraints cannot be meaningfully improved due to the cosmic variance of horizon-scale perturbations. In this paper, we discuss what future experiments will need to do in order to measure spatial curvature to this maximum accuracy. Our conservative forecasts show that the curvature floor is unreachable—by an order of magnitude—even with Stage IV experiments, unless strong assumptions are made about dark energy evolution and the Λ CDM parameter values. We also discuss some of the novel problems that arise when attempting to constrain a global cosmological parameter like ΩK with such high precision. Measuring curvature down to this level would be an important validation of systematics characterization in high-precision cosmological analyses.
Nanoscale Membrane Curvature detected by Polarized Localization Microscopy
NASA Astrophysics Data System (ADS)
Kelly, Christopher; Maarouf, Abir; Woodward, Xinxin
Nanoscale membrane curvature is a necessary component of countless cellular processes. Here we present Polarized Localization Microscopy (PLM), a super-resolution optical imaging technique that enables the detection of nanoscale membrane curvature with order-of-magnitude improvements over comparable optical techniques. PLM combines the advantages of polarized total internal reflection fluorescence microscopy and fluorescence localization microscopy to reveal single-fluorophore locations and orientations without reducing localization precision by point spread function manipulation. PLM resolved nanoscale membrane curvature of a supported lipid bilayer draped over polystyrene nanoparticles on a glass coverslip, thus creating a model membrane with coexisting flat and curved regions and membrane radii of curvature as small as 20 nm. Further, PLM provides single-molecule trajectories and the aggregation of curvature-inducing proteins with super-resolution to reveal the correlated effects of membrane curvature, dynamics, and molecular sorting. For example, cholera toxin subunit B has been observed to induce nanoscale membrane budding and concentrate at the bud neck. PLM reveals a previously hidden and critical information of membrane topology.
Spontaneous Curvature of Polymer Brushes
NASA Astrophysics Data System (ADS)
Sheiko, Sergei; da Silva, Marcelo; Shirvaniants, David; Rodrigues, Carlos; Beers, Kathryn; Matyjaszewski, Krzysztof; Potemkin, Igor; Moeller, Martin
2003-03-01
Experimental studies of cylindrical brushes on surfaces revealed peculiar shape of brush molecules with a curved backbone. According to scaling analysis, spontaneous bending of the backbone can be driven by entropic elasticity of the side chains: smaller extension of the chains is attained due to their asymmetric distribution with respect to the backbone. An equilibrium, i.e. spontaneous curvature results from the balance of the elasticity of the side chains and the elasticity of the interface. The curvature is predicted to increase with the side chain length. The system is of general interest because cylindrical brushes confined to a flat surface represent a two-dimensional cross-section of a planar brush grafted on both sides. Here we present systematic studies of cylindrical brushes with different length of the side chains. The curvature of cylindrical brushes confined to a flat substrate was investigated by atomic force microscopy. The method allowed visualization of individual molecules and quantitative analysis of their conformation. In agreement with theory, adsorbed brushes demonstrated spontaneous curvature, however the curvature was shown to decrease with the side chain length.
Spatial curvature falsifies eternal inflation
NASA Astrophysics Data System (ADS)
Kleban, Matthew; Schillo, Marjorie
2012-06-01
Inflation creates large-scale cosmological density perturbations that are characterized by an isotropic, homogeneous, and Gaussian random distribution about a locally flat background. Even in a flat universe, the spatial curvature measured within one Hubble volume receives contributions from long wavelength perturbations, and will not in general be zero. These same perturbations determine the Cosmic Microwave Background (CMB) temperature fluctuations, which are Script O(10-5). Consequently, the low-l multipole moments in the CMB temperature map predict the value of the measured spatial curvature Ωk. On this basis we argue that a measurement of |Ωk| > 10-4 would rule out slow-roll eternal inflation in our past with high confidence, while a measurement of Ωk < -10-4 (which is positive curvature, a locally closed universe) rules out false-vacuum eternal inflation as well, at the same confidence level. In other words, negative curvature (a locally open universe) is consistent with false-vacuum eternal inflation but not with slow-roll eternal inflation, and positive curvature falsifies both. Near-future experiments will dramatically extend the sensitivity of Ωk measurements and constitute a sharp test of these predictions.
Membrane curvature at a glance.
McMahon, Harvey T; Boucrot, Emmanuel
2015-03-15
Membrane curvature is an important parameter in defining the morphology of cells, organelles and local membrane subdomains. Transport intermediates have simpler shapes, being either spheres or tubules. The generation and maintenance of curvature is of central importance for maintaining trafficking and cellular functions. It is possible that local shapes in complex membranes could help to define local subregions. In this Cell Science at a Glance article and accompanying poster, we summarize how generating, sensing and maintaining high local membrane curvature is an active process that is mediated and controlled by specialized proteins using general mechanisms: (i) changes in lipid composition and asymmetry, (ii) partitioning of shaped transmembrane domains of integral membrane proteins or protein or domain crowding, (iii) reversible insertion of hydrophobic protein motifs, (iv) nanoscopic scaffolding by oligomerized hydrophilic protein domains and, finally, (v) macroscopic scaffolding by the cytoskeleton with forces generated by polymerization and by molecular motors. We also summarize some of the discoveries about the functions of membrane curvature, where in addition to providing cell or organelle shape, local curvature can affect processes like membrane scission and fusion as well as protein concentration and enzyme activation on membranes. PMID:25774051
On the Weyl curvature hypothesis
Stoica, Ovidiu Cristinel
2013-11-15
The Weyl curvature hypothesis of Penrose attempts to explain the high homogeneity and isotropy, and the very low entropy of the early universe, by conjecturing the vanishing of the Weyl tensor at the Big-Bang singularity. In previous papers it has been proposed an equivalent form of Einstein’s equation, which extends it and remains valid at an important class of singularities (including in particular the Schwarzschild, FLRW, and isotropic singularities). Here it is shown that if the Big-Bang singularity is from this class, it also satisfies the Weyl curvature hypothesis. As an application, we study a very general example of cosmological models, which generalizes the FLRW model by dropping the isotropy and homogeneity constraints. This model also generalizes isotropic singularities, and a class of singularities occurring in Bianchi cosmologies. We show that the Big-Bang singularity of this model is of the type under consideration, and satisfies therefore the Weyl curvature hypothesis. -- Highlights: •The singularities we introduce are described by finite geometric/physical objects. •Our singularities have smooth Riemann and Weyl curvatures. •We show they satisfy Penrose’s Weyl curvature hypothesis (Weyl=0 at singularities). •Examples: FLRW, isotropic singularities, an extension of Schwarzschild’s metric. •Example: a large class of singularities which may be anisotropic and inhomogeneous.
Curvature sensors: noise and its propagation.
Kellerer, Aglae
2010-11-01
The signal measured with a curvature sensor is analyzed. At the outset, we derive the required minimum number of sensing elements at the pupil edges, depending on the total number of sensing elements. The distribution of the sensor signal is further characterized in terms of its mean, variance, kurtosis, and skewness. It is established that while the approximation in terms of a Gaussian distribution is correct down to fairly low photon numbers, much higher numbers are required to obtain meaningful sensor measurements for small wavefront distortions. Finally, we indicate a closed expression for the error propagation factor and for the photon-noise-induced Strehl loss. PMID:21045888
Curvature generation in nematic surfaces
NASA Astrophysics Data System (ADS)
Mostajeran, Cyrus
2015-06-01
In recent years there has been a growing interest in the study of shape formation using modern responsive materials that can be preprogrammed to undergo spatially inhomogeneous local deformations. In particular, nematic liquid crystalline solids offer exciting possibilities in this context. Considerable recent progress has been made in achieving a variety of shape transitions in thin sheets of nematic solids by engineering isolated points of concentrated Gaussian curvature using topological defects in the nematic director field across textured surfaces. In this paper, we consider ways of achieving shape transitions in thin sheets of nematic glass by generation of nonlocalized Gaussian curvature in the absence of topological defects in the director field. We show how one can blueprint any desired Gaussian curvature in a thin nematic sheet by controlling the nematic alignment angle across the surface and highlight specific patterns which present feasible initial targets for experimental verification of the theory.
Cosmic strings with curvature corrections
NASA Astrophysics Data System (ADS)
Boisseau, Bruno; Letelier, Patricio S.
1992-08-01
A generic model of string described by a Lagrangian density that depends on the extrinsic curvature of the string worldsheet is studied. Using a system of coordinates adapted to the string world sheet the equation of motion and the energy-momentum tensor are derived for strings evolving in curved spacetime. We find that the curvature corrections may change the relation between the string energy density and the tension. It can also introduce heat propagation along the string. We also find for the Polyakov as well as Nambu strings with a topological term that the open string end points can travel with a speed less than the velocity of light.
Nonlinear Sorting, Curvature Generation, and Crowding of Endophilin N-BAR on Tubular Membranes
Zhu, Chen; Das, Sovan L.; Baumgart, Tobias
2012-01-01
The curvature of biological membranes is controlled by membrane-bound proteins. For example, during endocytosis, the sorting of membrane components, vesicle budding, and fission from the plasma membrane are mediated by adaptor and accessory proteins. Endophilin is a peripherally binding membrane protein that functions as an endocytic accessory protein. Endophilin's membrane tubulation capacity is well known. However, to understand the thermodynamic and mechanical aspects of endophilin function, experimental measurements need to be compared to quantitative theoretical models. We present measurements of curvature sorting and curvature generation of the endophilin A1 N-BAR domain on tubular membranes pulled from giant unilamellar vesicles. At low concentration, endophilin functions primarily as a membrane curvature sensor; at high concentrations, it also generates curvature. We determine the spontaneous curvature induced by endophilin and observe sigmoidal curvature/composition coupling isotherms that saturate at high membrane tensions and protein solution concentrations. The observation of saturation is supported by a strong dependence of lateral diffusion coefficients on protein density on the tether membrane. We develop a nonlinear curvature/composition coupling model that captures our experimental observations. Our model predicts a curvature-induced phase transition among two states with varying protein density and membrane curvature. This transition could act as a switch during endocytosis. PMID:22768939
Monomeric Synucleins Generate Membrane Curvature*
Westphal, Christopher H.; Chandra, Sreeganga S.
2013-01-01
Synucleins are a family of presynaptic membrane binding proteins. α-Synuclein, the principal member of this family, is mutated in familial Parkinson disease. To gain insight into the molecular functions of synucleins, we performed an unbiased proteomic screen and identified synaptic protein changes in αβγ-synuclein knock-out brains. We observed increases in the levels of select membrane curvature sensing/generating proteins. One of the most prominent changes was for the N-BAR protein endophilin A1. Here we demonstrate that the levels of synucleins and endophilin A1 are reciprocally regulated and that they are functionally related. We show that all synucleins can robustly generate membrane curvature similar to endophilins. However, only monomeric but not tetrameric α-synuclein can bend membranes. Further, A30P α-synuclein, a Parkinson disease mutant that disrupts protein folding, is also deficient in this activity. This suggests that synucleins generate membrane curvature through the asymmetric insertion of their N-terminal amphipathic helix. Based on our findings, we propose to include synucleins in the class of amphipathic helix-containing proteins that sense and generate membrane curvature. These results advance our understanding of the physiological function of synucleins. PMID:23184946
Space Curvature and the "Heavy Banana 'Paradox.'"
ERIC Educational Resources Information Center
Gruber, Ronald P.; And Others
1991-01-01
Two ways to visually enhance the concept of space curvature are described. Viewing space curvature as a meterstick contraction and the heavy banana "paradox" are discussed. The meterstick contraction is mathematically explained. (KR)
Barenboim, Gabriela; Martínez, Enrique Fernández; Mena, Olga; Verde, Licia E-mail: enfmarti@mppmu.mpg.de E-mail: liciaverde@icc.ub.edu
2010-03-01
Geometrical tests such as the combination of the Hubble parameter H(z) and the angular diameter distance d{sub A}(z) can, in principle, break the degeneracy between the dark energy equation of state parameter w(z), and the spatial curvature Ω{sub k} in a direct, model-independent way. In practice, constraints on these quantities achievable from realistic experiments, such as those to be provided by Baryon Acoustic Oscillation (BAO) galaxy surveys in combination with CMB data, can resolve the cosmic confusion between the dark energy equation of state parameter and curvature only statistically and within a parameterized model for w(z). Combining measurements of both H(z) and d{sub A}(z) up to sufficiently high redshifts z ∼ 2 and employing a parameterization of the redshift evolution of the dark energy equation of state are the keys to resolve the w(z)−Ω{sub k} degeneracy.
Non-linear curvature inhomogeneities and backreaction for relativistic viscous fluids
NASA Astrophysics Data System (ADS)
Giovannini, Massimo
2015-08-01
The non-perturbative curvature inhomogeneities induced by relativistic viscous fluids are not conserved in the large-scale limit. However, when the bulk viscosity is a function of the total energy density of the plasma (or of the trace of the extrinsic curvature), the relevant evolution equations develop a further symmetry preventing the nonlinear growth of curvature perturbations. In this situation the fully inhomogeneous evolution can be solved to leading order in the gradient expansion. Over large scales, both the acceleration and the curvature inhomogeneities are determined by the bulk viscosity coefficients. Conversely the shear viscosity does not affect the evolution of the curvature and does not produce any acceleration. The curvature modes analyzed here do not depend on the choice of time hypersurfaces and are invariant for infinitesimal coordinate transformations in the perturbative regime.
Classification and quantification of leaf curvature
Liu, Zhongyuan; Jia, Liguo; Mao, Yanfei; He, Yuke
2010-01-01
Various mutants of Arabidopsis thaliana deficient in polarity, cell division, and auxin response are characterized by certain types of leaf curvature. However, comparison of curvature for clarification of gene function can be difficult without a quantitative measurement of curvature. Here, a novel method for classification and quantification of leaf curvature is reported. Twenty-two mutant alleles from Arabidopsis mutants and transgenic lines deficient in leaf flatness were selected. The mutants were classified according to the direction, axis, position, and extent of leaf curvature. Based on a global measure of whole leaves and a local measure of four regions in the leaves, the curvature index (CI) was proposed to quantify the leaf curvature. The CI values accounted for the direction, axis, position, and extent of leaf curvature in all of the Arabidopsis mutants grown in growth chambers. Comparison of CI values between mutants reveals the spatial and temporal variations of leaf curvature, indicating the strength of the mutant alleles and the activities of the corresponding genes. Using the curvature indices, the extent of curvature in a complicated genetic background becomes quantitative and comparable, thus providing a useful tool for defining the genetic components of leaf development and to breed new varieties with leaf curvature desirable for the efficient capture of sunlight for photosynthesis and high yields. PMID:20400533
Curvature-Controlled Defect Localization in Elastic Surface Crystals
NASA Astrophysics Data System (ADS)
Jiménez, Francisco López; Stoop, Norbert; Lagrange, Romain; Dunkel, Jörn; Reis, Pedro M.
2016-03-01
We investigate the influence of curvature and topology on crystalline dimpled patterns on the surface of generic elastic bilayers. Our numerical analysis predicts that the total number of defects created by adiabatic compression exhibits universal quadratic scaling for spherical, ellipsoidal, and toroidal surfaces over a wide range of system sizes. However, both the localization of individual defects and the orientation of defect chains depend strongly on the local Gaussian curvature and its gradients across a surface. Our results imply that curvature and topology can be utilized to pattern defects in elastic materials, thus promising improved control over hierarchical bending, buckling, or folding processes. Generally, this study suggests that bilayer systems provide an inexpensive yet valuable experimental test bed for exploring the effects of geometrically induced forces on assemblies of topological charges.
Nonminimal coupling of perfect fluids to curvature
Bertolami, Orfeu; Lobo, Francisco S. N.; Paramos, Jorge
2008-09-15
In this work, we consider different forms of relativistic perfect fluid Lagrangian densities that yield the same gravitational field equations in general relativity (GR). A particularly intriguing example is the case with couplings of the form [1+f{sub 2}(R)]L{sub m}, where R is the scalar curvature, which induces an extra force that depends on the form of the Lagrangian density. It has been found that, considering the Lagrangian density L{sub m}=p, where p is the pressure, the extra-force vanishes. We argue that this is not the unique choice for the matter Lagrangian density, and that more natural forms for L{sub m} do not imply the vanishing of the extra force. Particular attention is paid to the impact on the classical equivalence between different Lagrangian descriptions of a perfect fluid.
SLED phenomenology: curvature vs. volume
NASA Astrophysics Data System (ADS)
Niedermann, Florian; Schneider, Robert
2016-03-01
We assess the question whether the SLED (Supersymmetric Large Extra Dimensions) model admits phenomenologically viable solutions with 4D maximal symmetry. We take into account a finite brane width and a scale invariance (SI) breaking dilaton-brane coupling, both of which should be included in a realistic setup. Provided that the brane tension and the microscopic size of the brane take generic values set by the fundamental bulk Planck scale, we find that either the 4D curvature or the size of the extra dimensions is unacceptably large. Since this result is independent of the dilaton-brane couplings, it provides the biggest challenge to the SLED program.
Intracellular magnetophoresis of amyloplasts and induction of root curvature
NASA Technical Reports Server (NTRS)
Kuznetsov, O. A.; Hasenstein, K. H.
1996-01-01
High-gradient magnetic fields (HGMFs) were used to induce intracellular magnetophoresis of amyloplasts. The HGMFs were generated by placing a small ferromagnetic wedge into a uniform magnetic field or at the gap edge between two permanent magnets. In the vicinity of the tip of the wedge the dynamic factor of the magnetic field, delta(H2/2), was about 10(9) Oe2.cm-1, which subjected the amyloplasts to a force comparable to that of gravity. When roots of 2-d-old seedlings of flax (Linum usitatissimum L.) were positioned vertically and exposed to an HGMF, curvature away from the wedge was transient and lasted approximately 1 h. Average curvature obtained after placing magnets, wedge and seedlings on a 1-rpm clinostat for 2 h was 33 +/- 5 degrees. Roots of horizontally placed control seedlings without rotation curved about 47 +/- 4 degrees. The time course of curvature and changes in growth rate were similar for gravicurvature and for root curvature induced by HGMFs. Microscopy showed displacement of amyloplasts in vitro and in vivo. Studies with Arabidopsis thaliana (L.) Heynh. showed that the wild type responded to HGMFs but the starchless mutant TC7 did not. The data indicate that a magnetic force can be used to study the gravisensing and response system of roots.
Mirror with thermally controlled radius of curvature
Neil, George R.; Shinn, Michelle D.
2010-06-22
A radius of curvature controlled mirror for controlling precisely the focal point of a laser beam or other light beam. The radius of curvature controlled mirror provides nearly spherical distortion of the mirror in response to differential expansion between the front and rear surfaces of the mirror. The radius of curvature controlled mirror compensates for changes in other optical components due to heating or other physical changes. The radius of curvature controlled mirror includes an arrangement for adjusting the temperature of the front surface and separately adjusting the temperature of the rear surface to control the radius of curvature. The temperature adjustment arrangements can include cooling channels within the mirror body or convection of a gas upon the surface of the mirror. A control system controls the differential expansion between the front and rear surfaces to achieve the desired radius of curvature.
Canards and curvature: nonsmooth approximation by pinching
NASA Astrophysics Data System (ADS)
Desroches, M.; Jeffrey, M. R.
2011-05-01
In multiple time-scale (singularly perturbed) dynamical systems, canards are counterintuitive solutions that evolve along both attracting and repelling invariant manifolds. In two dimensions, canards result in periodic oscillations whose amplitude and period grow in a highly nonlinear way: they are slowly varying with respect to a control parameter, except for an exponentially small range of values where they grow extremely rapidly. This sudden growth, called a canard explosion, has been encountered in many applications ranging from chemistry to neuronal dynamics, aerospace engineering and ecology. Canards were initially studied using nonstandard analysis, and later the same results were proved by standard techniques such as matched asymptotics, invariant manifold theory and parameter blow-up. More recently, canard-like behaviour has been linked to surfaces of discontinuity in piecewise-smooth dynamical systems. This paper provides a new perspective on the canard phenomenon by showing that the nonstandard analysis of canard explosions can be recast into the framework of piecewise-smooth dynamical systems. An exponential coordinate scaling is applied to a singularly perturbed system of ordinary differential equations. The scaling acts as a lens that resolves dynamics across all time-scales. The changes of local curvature that are responsible for canard explosions are then analysed. Regions where different time-scales dominate are separated by hypersurfaces, and these are pinched together to obtain a piecewise-smooth system, in which curvature changes manifest as discontinuity-induced bifurcations. The method is used to classify canards in arbitrary dimensions, and to derive the parameter values over which canards form either small cycles (canards without head) or large cycles (canards with head).
x-y curvature wavefront sensor.
Cagigal, Manuel P; Valle, Pedro J
2015-04-15
In this Letter, we propose a new curvature wavefront sensor based on the principles of optical differentiation. The theoretically modeled setup consists of a diffractive optical mask placed at the intermediate plane of a classical two-lens coherent optical processor. The resulting image is composed of a number of local derivatives of the entrance pupil function whose proper combination provides the wavefront curvature. In contrast to the common radial curvature sensors, this one is able to provide the x and y wavefront curvature maps simultaneously. The sensor offers other additional advantages like having high spatial resolution, adjustable dynamic range, and not being sensitive to misalignment. PMID:25872040
Radius of curvature controlled mirror
Neil, George R.; Rathke, John Wickham; Schultheiss, Thomas John; Shinn, Michelle D.; Dillon-Townes, Lawrence A.
2006-01-17
A controlled radius of curvature mirror assembly comprising: a distortable mirror having a reflective surface and a rear surface; and in descending order from the rear surface; a counter-distortion plate; a flow diverter having a flow diverter aperture at the center thereof; a flow return plate having a flow return aperture at the center thereof; a thermal isolation plate having a thermal isolation plate aperture at the center thereof and a flexible heater having a rear surface and a flexible heater aperture at the center thereof; a double walled tube defining a coolant feed chamber and a coolant return chamber; said coolant feed chamber extending to and through the flow diverter aperture and terminating at the counter-distortion plate and the coolant return chamber extending to and through the thermal isolation backplate and terminating at the flow diverter; and a coolant feed and a coolant return exit at the rear of said flexible heater.
Robust contour decomposition using a constant curvature criterion
NASA Technical Reports Server (NTRS)
Wuescher, Daniel M.; Boyer, Kim L.
1991-01-01
The problem of decomposing an extended boundary or contour into simple primitives is addressed with particular emphasis on Laplacian-of-Gaussian (LoG) zero-crossing contours. A technique is introduced for partitioning such contours into constant curvature segments. A nonlinear `blip' filter matched to the impairment signature of the curvature computation process, an overlapped voting scheme, and a sequential contiguous segment extraction mechanism are used. This technique is insensitive to reasonable changes in algorithm parameters and robust to noise and minor viewpoint-induced distortions in the contour shape, such as those encountered between stereo image pairs. The results vary smoothly with the data, and local perturbations induce only local changes in the result. Robustness and insensitivity are experimentally verified.
Determining wave direction using curvature parameters.
de Queiroz, Eduardo Vitarelli; de Carvalho, João Luiz Baptista
2016-01-01
The curvature of the sea wave was tested as a parameter for estimating wave direction in the search for better results in estimates of wave direction in shallow waters, where waves of different sizes, frequencies and directions intersect and it is difficult to characterize. We used numerical simulations of the sea surface to determine wave direction calculated from the curvature of the waves. Using 1000 numerical simulations, the statistical variability of the wave direction was determined. The results showed good performance by the curvature parameter for estimating wave direction. Accuracy in the estimates was improved by including wave slope parameters in addition to curvature. The results indicate that the curvature is a promising technique to estimate wave directions.•In this study, the accuracy and precision of curvature parameters to measure wave direction are analyzed using a model simulation that generates 1000 wave records with directional resolution.•The model allows the simultaneous simulation of time-series wave properties such as sea surface elevation, slope and curvature and they were used to analyze the variability of estimated directions.•The simultaneous acquisition of slope and curvature parameters can contribute to estimates wave direction, thus increasing accuracy and precision of results. PMID:27408830
Bcl-2 apoptosis proteins, mitochondrial membrane curvature, and cancer
NASA Astrophysics Data System (ADS)
Hwee Lai, Ghee; Schmidt, Nathan; Sanders, Lori; Mishra, Abhijit; Wong, Gerard; Ivashyna, Olena; Christenson, Eric; Schlesinger, Paul; Akabori, Kiyotaka; Santangelo, Christian
2012-02-01
Critical interactions between Bcl-2 family proteins permeabilize the outer mitochondrial membrane, a common decision point early in the intrinsic apoptotic pathway that irreversibly commits the cell to death. However, a unified picture integrating the essential non-passive role of lipid membranes with the contested dynamics of Bcl-2 regulation remains unresolved. Correlating results between synchrotron x-ray diffraction and microscopy in cell-free assays, we report activation of pro-apoptotic Bax induces strong pure negative Gaussian membrane curvature topologically necessary for pore formation and membrane remodeling events. Strikingly, Bcl-xL suppresses not only Bax-induced pore formation, but also membrane remodeling by disparate systems including cell penetrating, antimicrobial or viral fusion peptides, and bacterial toxin, none of which have BH3 allosteric domains to mediate direct binding. We propose a parallel mode of Bcl-2 pore regulation in which Bax and Bcl-xL induce antagonistic and mutually interacting Gaussian membrane curvatures. The universal nature of curvature-mediated interactions allows synergy with direct binding mechanisms, and potentially accounts for the Bcl-2 family modulation of mitochondrial fission/fusion dynamics.
NASA Technical Reports Server (NTRS)
Lee, J. S.; Evans, M. L.
1990-01-01
We tested the involvement of ethylene in maize (Zea mays L.) root gravitropism by measuring the kinetics of curvature and lateral auxin movement in roots treated with ethylene, inhibitors of ethylene synthesis, or inhibitors of ethylene action. In the presence of ethylene the latent period of gravitropic curvature appeared to be increased somewhat. However, ethylene-treated roots continued to curve after control roots had reached their final angle of curvature. Consequently, maximum curvature in the presence of ethylene was much greater in ethylene-treated roots than in controls. Inhibitors of ethylene biosynthesis or action had effects on the kinetics of curvature opposite to that of ethylene, i.e. the latent period appeared to be shortened somewhat while total curvature was reduced relative to that of controls. Label from applied 3H-indole-3-acetic acid was preferentially transported toward the lower side of stimulated roots. In parallel with effects on curvature, ethylene treatment delayed the development of gravity-induced asymmetric auxin movement across the root but extended its duration once initiated. The auxin transport inhibitor, 1-N-naphthylphthalamic acid reduced both gravitropic curvature and the effect of ethylene on curvature. Since neither ethylene nor inhibitors of ethylene biosynthesis or action prevented curvature, we conclude that ethylene does not mediate the primary differential growth response causing curvature. Because ethylene affects curvature and auxin transport in parallel, we suggest that ethylene modifies curvature by affecting gravity-induced lateral transport of auxin, perhaps by interfering with adaptation of the auxin transport system to the gravistimulus.
Lee, June S.; Chang, Wha-Kyung; Evans, Michael L.
1990-01-01
We tested the involvement of ethylene in maize (Zea mays L.) root gravitropism by measuring the kinetics of curvature and lateral auxin movement in roots treated with ethylene, inhibitors of ethylene synthesis, or inhibitors of ethylene action. In the presence of ethylene the latent period of gravitropic curvature appeared to be increased somewhat. However, ethylene-treated roots continued to curve after control roots had reached their final angle of curvature. Consequently, maximum curvature in the presence of ethylene was much greater in ethylene-treated roots than in controls. Inhibitors of ethylene biosynthesis or action had effects on the kinetics of curvature opposite to that of ethylene, i.e. the latent period appeared to be shortened somewhat while total curvature was reduced relative to that of controls. Label from applied 3H-indole-3-acetic acid was preferentially transported toward the lower side of stimulated roots. In parallel with effects on curvature, ethylene treatment delayed the development of gravity-induced asymmetric auxin movement across the root but extended its duration once initiated. The auxin transport inhibitor, 1-N-naphthylphthalamic acid reduced both gravitropic curvature and the effect of ethylene on curvature. Since neither ethylene nor inhibitors of ethylene biosynthesis or action prevented curvature, we conclude that ethylene does not mediate the primary differential growth response causing curvature. Because ethylene affects curvature and auxin transport in parallel, we suggest that ethylene modifies curvature by affecting gravity-induced lateral transport of auxin, perhaps by interfering with adaptation of the auxin transport system to the gravistimulus. PMID:11537475
Lee, J S; Chang W-K; Evans, M L
1990-01-01
We tested the involvement of ethylene in maize (Zea mays L.) root gravitropism by measuring the kinetics of curvature and lateral auxin movement in roots treated with ethylene, inhibitors of ethylene synthesis, or inhibitors of ethylene action. In the presence of ethylene the latent period of gravitropic curvature appeared to be increased somewhat. However, ethylene-treated roots continued to curve after control roots had reached their final angle of curvature. Consequently, maximum curvature in the presence of ethylene was much greater in ethylene-treated roots than in controls. Inhibitors of ethylene biosynthesis or action had effects on the kinetics of curvature opposite to that of ethylene, i.e. the latent period appeared to be shortened somewhat while total curvature was reduced relative to that of controls. Label from applied 3H-indole-3-acetic acid was preferentially transported toward the lower side of stimulated roots. In parallel with effects on curvature, ethylene treatment delayed the development of gravity-induced asymmetric auxin movement across the root but extended its duration once initiated. The auxin transport inhibitor, 1-N-naphthylphthalamic acid reduced both gravitropic curvature and the effect of ethylene on curvature. Since neither ethylene nor inhibitors of ethylene biosynthesis or action prevented curvature, we conclude that ethylene does not mediate the primary differential growth response causing curvature. Because ethylene affects curvature and auxin transport in parallel, we suggest that ethylene modifies curvature by affecting gravity-induced lateral transport of auxin, perhaps by interfering with adaptation of the auxin transport system to the gravistimulus. PMID:11537475
Gao, Dengliang
2013-03-01
In 3D seismic interpretation, curvature is a popular attribute that depicts the geometry of seismic reflectors and has been widely used to detect faults in the subsurface; however, it provides only part of the solutions to subsurface structure analysis. This study extends the curvature algorithm to a new curvature gradient algorithm, and integrates both algorithms for fracture detection using a 3D seismic test data set over Teapot Dome (Wyoming). In fractured reservoirs at Teapot Dome known to be formed by tectonic folding and faulting, curvature helps define the crestal portion of the reservoirs that is associated with strong seismic amplitude and high oil productivity. In contrast, curvature gradient helps better define the regional northwest-trending and the cross-regional northeast-trending lineaments that are associated with weak seismic amplitude and low oil productivity. In concert with previous reports from image logs, cores, and outcrops, the current study based on an integrated seismic curvature and curvature gradient analysis suggests that curvature might help define areas of enhanced potential to form tensile fractures, whereas curvature gradient might help define zones of enhanced potential to develop shear fractures. In certain fractured reservoirs such as at Teapot Dome where faulting and fault-related folding contribute dominantly to the formation and evolution of fractures, curvature and curvature gradient attributes can be potentially applied to differentiate fracture mode, to predict fracture intensity and orientation, to detect fracture volume and connectivity, and to model fracture networks.
Programming curvature using origami tessellations
NASA Astrophysics Data System (ADS)
Dudte, Levi H.; Vouga, Etienne; Tachi, Tomohiro; Mahadevan, L.
2016-05-01
Origami describes rules for creating folded structures from patterns on a flat sheet, but does not prescribe how patterns can be designed to fit target shapes. Here, starting from the simplest periodic origami pattern that yields one-degree-of-freedom collapsible structures--we show that scale-independent elementary geometric constructions and constrained optimization algorithms can be used to determine spatially modulated patterns that yield approximations to given surfaces of constant or varying curvature. Paper models confirm the feasibility of our calculations. We also assess the difficulty of realizing these geometric structures by quantifying the energetic barrier that separates the metastable flat and folded states. Moreover, we characterize the trade-off between the accuracy to which the pattern conforms to the target surface, and the effort associated with creating finer folds. Our approach enables the tailoring of origami patterns to drape complex surfaces independent of absolute scale, as well as the quantification of the energetic and material cost of doing so.
Magnetophoretic Induction of Root Curvature
NASA Technical Reports Server (NTRS)
Hasenstein, Karl H.
1997-01-01
The last year of the grant period concerned the consolidation of previous experiments to ascertain that the theoretical premise apply not just to root but also to shoots. In addition, we verified that high gradient magnetic fields do not interfere with regular cellular activities. Previous results have established that: (1) intracellular magnetophoresis is possible; and (2) HGMF lead to root curvature. In order to investigate whether HGMF affect the assembly and/or organization of structural proteins, we examined the arrangement of microtubules in roots exposed to HGMF. The cytoskeletal investigations were performed with fomaldehyde-fixed, nonembedded tissue segments that were cut with a vibratome. Microtubules (MTs) were stained with rat anti-yeast tubulin (YOL 1/34) and DTAF-labeled antibody against rat IgG. Microfilaments (MFs) were visualized by incubation in rhodamine-labeled phalloidin. The distribution and arrangement of both components of the cytoskeleton were examined with a confocal microscope. Measurements of growth rates and graviresponse were done using a video-digitizer. Since HGMF repel diamagnetic substances including starch-filled amyloplasts and most The second aspect of the work includes studies of the effect of cytoskeletal inhibitors on MTs and MFs. The analysis of the effect of micotubular inhibitors on the auxin transport in roots showed that there is very little effect of MT-depolymerizing or stabilizing drugs on auxin transport. This is in line with observations that application of such drugs is not immediately affecting the graviresponsiveness of roots.
Curvature and torsion in growing actin networks
NASA Astrophysics Data System (ADS)
Shaevitz, Joshua W.; Fletcher, Daniel A.
2008-06-01
Intracellular pathogens such as Listeria monocytogenes and Rickettsia rickettsii move within a host cell by polymerizing a comet-tail of actin fibers that ultimately pushes the cell forward. This dense network of cross-linked actin polymers typically exhibits a striking curvature that causes bacteria to move in gently looping paths. Theoretically, tail curvature has been linked to details of motility by considering force and torque balances from a finite number of polymerizing filaments. Here we track beads coated with a prokaryotic activator of actin polymerization in three dimensions to directly quantify the curvature and torsion of bead motility paths. We find that bead paths are more likely to have low rather than high curvature at any given time. Furthermore, path curvature changes very slowly in time, with an autocorrelation decay time of 200 s. Paths with a small radius of curvature, therefore, remain so for an extended period resulting in loops when confined to two dimensions. When allowed to explore a three-dimensional (3D) space, path loops are less evident. Finally, we quantify the torsion in the bead paths and show that beads do not exhibit a significant left- or right-handed bias to their motion in 3D. These results suggest that paths of actin-propelled objects may be attributed to slow changes in curvature, possibly associated with filament debranching, rather than a fixed torque.
Soliton curvatures of surfaces and spaces
Konopelchenko, B.G.
1997-01-01
An intrinsic geometry of surfaces and three-dimensional Riemann spaces is discussed. In the geodesic coordinates the Gauss equation for two-dimensional Riemann spaces (surfaces) is reduced to the one-dimensional Schr{umlt o}dinger equation, where the Gaussian curvature plays a role of potential. The use of this fact provides an infinite set of explicit expressions for curvature and metric of surface. A special case is governed by the KdV equation for the Gaussian curvature. Integrable dynamics of curvature via the KdV equation, higher KdV equations, and 2+1-dimensional integrable equations with breaking solitons is considered. For a special class of three-dimensional Riemann spaces the relation between metric and scalar curvature is given by the two-dimensional stationary Schr{umlt o}dinger or perturbed string equations. This provides us an infinite family of Riemann spaces with explicit scalar curvature and metric. Particular class of spaces and their integrable evolutions are described by the Nizhnik{endash}Veselov{endash}Novikov equation and its higher analogs. Surfaces and three-dimensional Riemann spaces with large curvature and slow dependence on the variable are considered. They are associated with the Burgers and Kadomtsev{endash}Petviashvili equations, respectively. {copyright} {ital 1997 American Institute of Physics.}
Distributed curvature and stability of fullerenes.
Fowler, Patrick W; Nikolić, Sonja; De Los Reyes, Rasthy; Myrvold, Wendy
2015-09-21
Energies of non-planar conjugated π systems are typically described qualitatively in terms of the balance of π stabilisation and the steric strain associated with geometric curvature. Curvature also has a purely graph-theoretical description: combinatorial curvature at a vertex of a polyhedral graph is defined as one minus half the vertex degree plus the sum of reciprocal sizes of the faces meeting at that vertex. Prisms and antiprisms have positive combinatorial vertex curvature at every vertex. Excluding these two infinite families, we call any other polyhedron with everywhere positive combinatorial curvature a PCC polyhedron. Cubic PCC polyhedra are initially common, but must eventually die out with increasing vertex count; the largest example constructed so far has 132 vertices. The fullerenes Cn have cubic polyhedral molecular graphs with n vertices, 12 pentagonal and (n/2 - 10) hexagonal faces. We show that there are exactly 39 PCC fullerenes, all in the range 20 ≤n≤ 60. In this range, there is only partial correlation between PCC status and stability as defined by minimum pentagon adjacency. The sum of vertex curvatures is 2 for any polyhedron; for fullerenes the sum of squared vertex curvatures is linearly related to the number of pentagon adjacencies and hence is a direct measure of relative stability of the lower (n≤ 60) fullerenes. For n≥ 62, non-PCC fullerenes with a minimum number of pentagon adjacencies minimise mean-square curvature. For n≥ 70, minimum mean-square curvature implies isolation of pentagons, which is the strongest indicator of stability for a bare fullerene. PMID:26283188
Magnetic curvature effects on plasma interchange turbulence
NASA Astrophysics Data System (ADS)
Li, B.; Liao, X.; Sun, C. K.; Ou, W.; Liu, D.; Gui, G.; Wang, X. G.
2016-06-01
The magnetic curvature effects on plasma interchange turbulence and transport in the Z-pinch and dipole-like systems are explored with two-fluid global simulations. By comparing the transport levels in the systems with a different magnetic curvature, we show that the interchange-mode driven transport strongly depends on the magnetic geometry. For the system with large magnetic curvature, the pressure and density profiles are strongly peaked in a marginally stable state and the nonlinear evolution of interchange modes produces the global convective cells in the azimuthal direction, which lead to the low level of turbulent convective transport.
Ueki, Ayaka; Kidoaki, Satoru
2015-02-01
Directional cell migration induced by the stiffness gradient of cell culture substrates is known as a subset of the mechanical-cue-induced taxis, so-called mechanotaxis, typically durotaxis toward hard region. To establish the general conditions of biomaterials to manipulate the mechanotaxis, the effect of the shape of the elasticity transition boundary between hard and soft regions of a substrate on mechanotaxis should be systematically determined as well as the conditions of elasticity gradient strength. Here, as a simplified factor of expressing variations in the shape of the elasticity boundary in living tissues, we focus on the curvature of the elasticity boundary. Mask-free photolithographic microelasticity patterning of photocurable gelatin gel was employed to systematically prepare elasticity boundaries with various curvatures, and the efficiency of mechanotaxis of fibroblast cells around each curved boundary was examined. Highly efficient usual durotaxis was induced on a convex boundary with 100 μm in radius and on a concave boundary with 750 μm in radius of curvature. Interestingly, biased migration toward soft regions of the gel, i.e., inverse durotaxis, was first observed for concave boundaries with 50 μm or 100 μm in radius of curvature, which was named as "negative mechanotaxis". The curvature of the elasticity boundary was found to markedly affect the efficiency of induction and the direction of mechanotaxis. The mechanism responsible for this phenomenon and the implication for the curvature effect in in vivo systems are discussed. PMID:25522964
Visually discerning the curvature of the Earth.
Lynch, David K
2008-12-01
Reports and photographs claiming that visual observers can detect the curvature of the Earth from high mountains or high-flying commercial aircraft are investigated. Visual daytime observations show that the minimum altitude at which curvature of the horizon can be detected is at or slightly below 35,000 ft, providing that the field of view is wide (60 degrees ) and nearly cloud free. The high-elevation horizon is almost as sharp as the sea-level horizon, but its contrast is less than 10% that of the sea-level horizon. Photographs purporting to show the curvature of the Earth are always suspect because virtually all camera lenses project an image that suffers from barrel distortion. To accurately assess curvature from a photograph, the horizon must be placed precisely in the center of the image, i.e., on the optical axis. PMID:19037349
Spline-Based Smoothing of Airfoil Curvatures
NASA Technical Reports Server (NTRS)
Li, W.; Krist, S.
2008-01-01
Constrained fitting for airfoil curvature smoothing (CFACS) is a splinebased method of interpolating airfoil surface coordinates (and, concomitantly, airfoil thicknesses) between specified discrete design points so as to obtain smoothing of surface-curvature profiles in addition to basic smoothing of surfaces. CFACS was developed in recognition of the fact that the performance of a transonic airfoil is directly related to both the curvature profile and the smoothness of the airfoil surface. Older methods of interpolation of airfoil surfaces involve various compromises between smoothing of surfaces and exact fitting of surfaces to specified discrete design points. While some of the older methods take curvature profiles into account, they nevertheless sometimes yield unfavorable results, including curvature oscillations near end points and substantial deviations from desired leading-edge shapes. In CFACS as in most of the older methods, one seeks a compromise between smoothing and exact fitting. Unlike in the older methods, the airfoil surface is modified as little as possible from its original specified form and, instead, is smoothed in such a way that the curvature profile becomes a smooth fit of the curvature profile of the original airfoil specification. CFACS involves a combination of rigorous mathematical modeling and knowledge-based heuristics. Rigorous mathematical formulation provides assurance of removal of undesirable curvature oscillations with minimum modification of the airfoil geometry. Knowledge-based heuristics bridge the gap between theory and designers best practices. In CFACS, one of the measures of the deviation of an airfoil surface from smoothness is the sum of squares of the jumps in the third derivatives of a cubicspline interpolation of the airfoil data. This measure is incorporated into a formulation for minimizing an overall deviation- from-smoothness measure of the airfoil data within a specified fitting error tolerance. CFACS has been
Curvature tensors unified field equations on SEXn
NASA Astrophysics Data System (ADS)
Chung, Kyung Tae; Lee, Il Young
1988-09-01
We study the curvature tensors and field equations in the n-dimensional SE manifold SEXn. We obtain several basic properties of the vectors S λ and U λ and then of the SE curvature tensor and its contractions, such as a generalized Ricci identity, a generalized Bianchi identity, and two variations of the Bianchi identity satisfied by the SE Einstein tensor. Finally, a system of field equations is discussed in SEXn and one of its particular solutions is constructed and displayed.
Cosmological attractor models and higher curvature supergravity
NASA Astrophysics Data System (ADS)
Cecotti, Sergio; Kallosh, Renata
2014-05-01
We study cosmological α-attractors in superconformal/supergravity models, where α is related to the geometry of the moduli space. For α = 1 attractors [1] we present a generalization of the previously known manifestly superconformal higher curvature supergravity model [2]. The relevant standard 2-derivative supergravity with a minimum of two chiral multiplets is shown to be dual to a 4-derivative higher curvature supergravity, where in general one of the chiral superfields is traded for a curvature superfield. There is a degenerate case when both matter superfields become non-dynamical and there is only a chiral curvature superfield, pure higher derivative supergravity. Generic α-models [3] interpolate between the attractor point at α = 0 and generic chaotic inflation models at large α, in the limit when the inflaton moduli space becomes flat. They have higher derivative duals with the same number of matter fields as the original theory or less, but at least one matter multiplet remains. In the context of these models, the detection of primordial gravity waves will provide information on the curvature of the inflaton submanifold of the Kähler manifold, and we will learn if the inflaton is a fundamental matter multiplet, or can be replaced by a higher derivative curvature excitation.
The role of curvature in entanglement
NASA Astrophysics Data System (ADS)
Buck, Gregory
2015-10-01
Which tangles more readily: curly hair or straight hair? A perhaps natural thought, supported by some theoretical evidence, is to associate curvature and entanglement, and assume that they would grow together-that an increase in one fosters an increase in the other. However we have biological examples such as DNA in the chromosome, and mechanical examples such as coiled telephone cords, in which much more curvature is employed than is required for the packing, and in which tangling is presumably detrimental. We offer a resolution to this conundrum. We show, that at least for simple but generally applicable models, the relationship between curvature and entanglement is subtle: if we keep filament density constant and increase curvature, the entanglement initially increases, passes through a maximum, then decreases, so there is a regime where increasing curvature increases entanglement, and there is also a regime where increasing curvature decreases entanglement. This has implications for filament packing in many circumstances, and in particular for the compaction structure of DNA in the cell-it provides a straightforward argument for the view that one purpose of DNA coiling and supercoiling is to inhibit entanglement. It also tells us to expect that wavy hair-neither the straightest nor the curliest-tangles most readily.
Spherical gravitational curvature boundary-value problem
NASA Astrophysics Data System (ADS)
Šprlák, Michal; Novák, Pavel
2016-08-01
Values of scalar, vector and second-order tensor parameters of the Earth's gravitational field have been collected by various sensors in geodesy and geophysics. Such observables have been widely exploited in different parametrization methods for the gravitational field modelling. Moreover, theoretical aspects of these quantities have extensively been studied and well understood. On the other hand, new sensors for observing gravitational curvatures, i.e., components of the third-order gravitational tensor, are currently under development. As the gravitational curvatures represent new types of observables, their exploitation for modelling of the Earth's gravitational field is a subject of this study. Firstly, the gravitational curvature tensor is decomposed into six parts which are expanded in terms of third-order tensor spherical harmonics. Secondly, gravitational curvature boundary-value problems defined for four combinations of the gravitational curvatures are formulated and solved in spectral and spatial domains. Thirdly, properties of the corresponding sub-integral kernels are investigated. The presented mathematical formulations reveal some important properties of the gravitational curvatures and extend the so-called Meissl scheme, i.e., an important theoretical framework that relates various parameters of the Earth's gravitational field.
Spherical gravitational curvature boundary-value problem
NASA Astrophysics Data System (ADS)
Šprlák, Michal; Novák, Pavel
2016-05-01
Values of scalar, vector and second-order tensor parameters of the Earth's gravitational field have been collected by various sensors in geodesy and geophysics. Such observables have been widely exploited in different parametrization methods for the gravitational field modelling. Moreover, theoretical aspects of these quantities have extensively been studied and well understood. On the other hand, new sensors for observing gravitational curvatures, i.e., components of the third-order gravitational tensor, are currently under development. As the gravitational curvatures represent new types of observables, their exploitation for modelling of the Earth's gravitational field is a subject of this study. Firstly, the gravitational curvature tensor is decomposed into six parts which are expanded in terms of third-order tensor spherical harmonics. Secondly, gravitational curvature boundary-value problems defined for four combinations of the gravitational curvatures are formulated and solved in spectral and spatial domains. Thirdly, properties of the corresponding sub-integral kernels are investigated. The presented mathematical formulations reveal some important properties of the gravitational curvatures and extend the so-called Meissl scheme, i.e., an important theoretical framework that relates various parameters of the Earth's gravitational field.
Damage detection for beam-like structures using the normalized curvature of a uniform load surface
NASA Astrophysics Data System (ADS)
Sung, S. H.; Jung, H. J.; Jung, H. Y.
2013-03-01
This paper presents a new vibration-based damage detection method for beam-like structures that uses the normalized uniform load surface (NULS) curvature obtained by modal flexibility. Analytical studies on the NULS curvature method for beam-like structures, which follow Bernoulli-Euler beam theory, have shown that changes in NULS curvature only occur at damaged elements and not at intact ones because the internal forces induced by damage only act on the damaged elements and not on the undamaged elements. Therefore, computing the changes in NULS curvature set indicating only damaged elements at a normalized level is central to the approach. Also, a damage index is proposed based on outlier analysis to account for measurement noise. In order to confirm the feasibility of the proposed method, a cantilever beam and a simply supported beam were numerically investigated for two damage scenarios by using modal parameters obtained by eigenvalue analysis and simulations of an impact test using MATLAB/Simulink. The results showed that the proposed method could accurately localize multiple damage locations as well as single damage locations without any false-positive or false-negative detections. For comparison, damage detection was also conducted using the uniform load surface (ULS) curvature method and the mode shape curvature method. The ULS curvature method clearly identified single damage locations but some missed multiple damage locations. For the mode shape curvature method, it was shown that the false-positive and false-negative detections were performed at several damaged or undamaged locations. The comparison showed that the proposed detection method can more effectively identify single and multiple damage locations than the other two methods. In conclusion, the proposed method performed better in detecting damages than the other two methods in terms of sensitivity to damage regardless of location and robustness against noisy signals generated from calculating the
No large scale curvature perturbations during the waterfall phase transition of hybrid inflation
Abolhasani, Ali Akbar; Firouzjahi, Hassan
2011-03-15
In this paper the possibility of generating large scale curvature perturbations induced from the entropic perturbations during the waterfall phase transition of the standard hybrid inflation model is studied. We show that whether or not appreciable amounts of large scale curvature perturbations are produced during the waterfall phase transition depends crucially on the competition between the classical and the quantum mechanical backreactions to terminate inflation. If one considers only the classical evolution of the system, we show that the highly blue-tilted entropy perturbations induce highly blue-tilted large scale curvature perturbations during the waterfall phase transition which dominate over the original adiabatic curvature perturbations. However, we show that the quantum backreactions of the waterfall field inhomogeneities produced during the phase transition dominate completely over the classical backreactions. The cumulative quantum backreactions of very small scale tachyonic modes terminate inflation very efficiently and shut off the curvature perturbation evolution during the waterfall phase transition. This indicates that the standard hybrid inflation model is safe under large scale curvature perturbations during the waterfall phase transition.
Strong curvature effects in Neumann wave problems
Willatzen, M.; Pors, A.; Gravesen, J.
2012-08-15
Waveguide phenomena play a major role in basic sciences and engineering. The Helmholtz equation is the governing equation for the electric field in electromagnetic wave propagation and the acoustic pressure in the study of pressure dynamics. The Schroedinger equation simplifies to the Helmholtz equation for a quantum-mechanical particle confined by infinite barriers relevant in semiconductor physics. With this in mind and the interest to tailor waveguides towards a desired spectrum and modal pattern structure in classical structures and nanostructures, it becomes increasingly important to understand the influence of curvature effects in waveguides. In this work, we demonstrate analytically strong curvature effects for the eigenvalue spectrum of the Helmholtz equation with Neumann boundary conditions in cases where the waveguide cross section is a circular sector. It is found that the linear-in-curvature contribution originates from parity symmetry breaking of eigenstates in circular-sector tori and hence vanishes in a torus with a complete circular cross section. The same strong curvature effect is not present in waveguides subject to Dirichlet boundary conditions where curvature contributions contribute to second-order in the curvature only. We demonstrate this finding by considering wave propagation in a circular-sector torus corresponding to Neumann and Dirichlet boundary conditions, respectively. Results for relative eigenfrequency shifts and modes are determined and compared with three-dimensional finite element method results. Good agreement is found between the present analytical method using a combination of differential geometry with perturbation theory and finite element results for a large range of curvature ratios.
Strong curvature effects in Neumann wave problems
NASA Astrophysics Data System (ADS)
Willatzen, M.; Pors, A.; Gravesen, J.
2012-08-01
Waveguide phenomena play a major role in basic sciences and engineering. The Helmholtz equation is the governing equation for the electric field in electromagnetic wave propagation and the acoustic pressure in the study of pressure dynamics. The Schrödinger equation simplifies to the Helmholtz equation for a quantum-mechanical particle confined by infinite barriers relevant in semiconductor physics. With this in mind and the interest to tailor waveguides towards a desired spectrum and modal pattern structure in classical structures and nanostructures, it becomes increasingly important to understand the influence of curvature effects in waveguides. In this work, we demonstrate analytically strong curvature effects for the eigenvalue spectrum of the Helmholtz equation with Neumann boundary conditions in cases where the waveguide cross section is a circular sector. It is found that the linear-in-curvature contribution originates from parity symmetry breaking of eigenstates in circular-sector tori and hence vanishes in a torus with a complete circular cross section. The same strong curvature effect is not present in waveguides subject to Dirichlet boundary conditions where curvature contributions contribute to second-order in the curvature only. We demonstrate this finding by considering wave propagation in a circular-sector torus corresponding to Neumann and Dirichlet boundary conditions, respectively. Results for relative eigenfrequency shifts and modes are determined and compared with three-dimensional finite element method results. Good agreement is found between the present analytical method using a combination of differential geometry with perturbation theory and finite element results for a large range of curvature ratios.
A new algorithm for evaluating 3D curvature and curvature gradient for improved fracture detection
NASA Astrophysics Data System (ADS)
Di, Haibin; Gao, Dengliang
2014-09-01
In 3D seismic interpretation, both curvature and curvature gradient are useful seismic attributes for structure characterization and fault detection in the subsurface. However, the existing algorithms are computationally intensive and limited by the lateral resolution for steeply-dipping formations. This study presents new and robust volume-based algorithms that evaluate both curvature and curvature gradient attributes more accurately and effectively. The algorithms first instantaneously fit a local surface to seismic data and then compute attributes using the spatial derivatives of the built surface. Specifically, the curvature algorithm constructs a quadratic surface by using a rectangle 9-node grid cell, whereas the curvature gradient algorithm builds a cubic surface by using a diamond 13-node grid cell. A dip-steering approach based on 3D complex seismic trace analysis is implemented to enhance the accuracy of surface construction and to reduce computational time. Applications to two 3D seismic surveys demonstrate the accuracy and efficiency of the new curvature and curvature gradient algorithms for characterizing faults and fractures in fractured reservoirs.
Unfolding the Berry curvature of supercell calculations
NASA Astrophysics Data System (ADS)
Bianco, Raffaello; Resta, Raffaele; Souza, Ivo
2014-03-01
Unfolding band structures of supercell calculations has become a valuable tool for visualizing the influence of point impurities on the electronic states in crystals. In the same spirit, we introduce a procedure which maps the k-space Berry curvature of the occupied states from the small BZ of a supercell onto the normal BZ of the perfect (or virtual) crystal. As an application, we analyze the k-space distribution of the unfolded curvature of bcc Fe1-xCox ordered alloys, to better understand the influence of alloying on the anomalous Hall conductivity. Comparing with the ordinary curvature calculated in the virtual-crystal approximation, we find that the lowering of translational symmetry by the Co ``impurities'' introduces ``extrinsic'' contributions, which correlate with changes in the spectral function near the Fermi surface. In particular, the unfolded curvature displays additional sharp peaks associated with low-energy pseudovertical transitions. These occur in regions of k-space where two unfolded bands, which in the virtual crystal would be separated in k-space (and therefore would not jointly contribute to its Berry curvature), lie on either side of the Fermi level and are coupled by the impurity potential.
Curvature constraints from large scale structure
NASA Astrophysics Data System (ADS)
Di Dio, Enea; Montanari, Francesco; Raccanelli, Alvise; Durrer, Ruth; Kamionkowski, Marc; Lesgourgues, Julien
2016-06-01
We modified the CLASS code in order to include relativistic galaxy number counts in spatially curved geometries; we present the formalism and study the effect of relativistic corrections on spatial curvature. The new version of the code is now publicly available. Using a Fisher matrix analysis, we investigate how measurements of the spatial curvature parameter ΩK with future galaxy surveys are affected by relativistic effects, which influence observations of the large scale galaxy distribution. These effects include contributions from cosmic magnification, Doppler terms and terms involving the gravitational potential. As an application, we consider angle and redshift dependent power spectra, which are especially well suited for model independent cosmological constraints. We compute our results for a representative deep, wide and spectroscopic survey, and our results show the impact of relativistic corrections on spatial curvature parameter estimation. We show that constraints on the curvature parameter may be strongly biased if, in particular, cosmic magnification is not included in the analysis. Other relativistic effects turn out to be subdominant in the studied configuration. We analyze how the shift in the estimated best-fit value for the curvature and other cosmological parameters depends on the magnification bias parameter, and find that significant biases are to be expected if this term is not properly considered in the analysis.
Curvature Sensing by a Viral Scission Protein.
Martyna, Agnieszka; Gómez-Llobregat, Jordi; Lindén, Martin; Rossman, Jeremy S
2016-06-28
Membrane scission is the final step in all budding processes wherein a membrane neck is sufficiently constricted so as to allow for fission and the release of the budded particle. For influenza viruses, membrane scission is mediated by an amphipathic helix (AH) domain in the viral M2 protein. While it is known that the M2AH alters membrane curvature, it is not known how the protein is localized to the center neck of budding virions where it would be able to cause membrane scission. Here, we use molecular dynamics simulations on buckled lipid bilayers to show that the M2AH senses membrane curvature and preferentially localizes to regions of high membrane curvature, comparable to that seen at the center neck of budding influenza viruses. These results were then validated using in vitro binding assays to show that the M2AH senses membrane curvature by detecting lipid packing defects in the membrane. Our results show that the M2AH senses membrane curvature and suggest that the AH domain may localize the protein at the viral neck where it can then mediate membrane scission and the release of budding viruses. PMID:27299375
Lipids, curvature, and nano-medicine*
Mouritsen, Ole G
2011-01-01
The physical properties of the lamellar lipid-bilayer component of biological membranes are controlled by a host of thermodynamic forces leading to overall tensionless bilayers with a conspicuous lateral pressure profile and build-in curvature-stress instabilities that may be released locally or globally in terms of morphological changes. In particular, the average molecular shape and the propensity of the different lipid and protein species for forming non-lamellar and curved structures are a source of structural transitions and control of biological function. The effects of different lipids, sterols, and proteins on membrane structure are discussed and it is shown how one can take advantage of the curvature-stress modulations brought about by specific molecular agents, such as fatty acids, lysolipids, and other amphiphilic solutes, to construct intelligent drug-delivery systems that function by enzymatic triggering via curvature. Practical applications: The simple concept of lipid molecular shape and how it impacts on the structure of lipid aggregates, in particular the curvature and curvature stress in lipid bilayers and liposomes, can be exploited to construct liposome-based drug-delivery systems, e.g., for use as nano-medicine in cancer therapy. Non-lamellar-forming lysolipids and fatty acids, some of which may be designed to be prodrugs, can be created by phospholipase action in diseased tissues thereby providing for targeted drug release and proliferation of molecular entities with conical shape that break down the permeability barrier of the target cells and may hence enhance efficacy. PMID:22164124
Curvature constraints from the causal entropic principle
Bozek, Brandon; Albrecht, Andreas; Phillips, Daniel
2009-07-15
Current cosmological observations indicate a preference for a cosmological constant that is drastically smaller than what can be explained by conventional particle physics. The causal entropic principle (Bousso et al.) provides an alternative approach to anthropic attempts to predict our observed value of the cosmological constant by calculating the entropy created within a causal diamond. We have extended this work to use the causal entropic principle to predict the preferred curvature within the 'multiverse'. We have found that values larger than {rho}{sub k}=40{rho}{sub m} are disfavored by more than 99.99% peak value at {rho}{sub {lambda}}=7.9x10{sup -123} and {rho}{sub k}=4.3{rho}{sub m} for open universes. For universes that allow only positive curvature or both positive and negative curvature, we find a correlation between curvature and dark energy that leads to an extended region of preferred values. Our universe is found to be disfavored to an extent depending on the priors on curvature. We also provide a comparison to previous anthropic constraints on open universes and discuss future directions for this work.
Zhao, Chunyu; Burge, James H
2013-12-16
Zernike polynomials are an orthonormal set of scalar functions over a circular domain, and are commonly used to represent wavefront phase or surface irregularity. In optical testing, slope or curvature of a surface or wavefront is sometimes measured instead, from which the surface or wavefront map is obtained. Previously we derived an orthonormal set of vector polynomials that fit to slope measurement data and yield the surface or wavefront map represented by Zernike polynomials. Here we define a 3-element curvature vector used to represent the second derivatives of a continuous surface, and derive a set of orthonormal curvature basis functions that are written in terms of Zernike polynomials. We call the new curvature functions the C polynomials. Closed form relations for the complete basis set are provided, and we show how to determine Zernike surface coefficients from the curvature data as represented by the C polynomials. PMID:24514717
Curvature effect on tearing modes in presence of neoclassical friction
Maget, Patrick; Mellet, Nicolas; Meshcheriakov, Dmytro; Garbet, Xavier; Lütjens, Hinrich
2013-11-15
Neoclassical physics (here associated to the poloidal variation of the magnetic field strength along field lines in a tokamak) is well known for driving self-generated plasma current and nonlinear magnetic islands associated to it in high performance, ITER relevant plasma discharges. It is demonstrated that the neoclassical friction between a magnetic perturbation and plasma flow already impacts magnetic islands in the linear regime, by inducing a weakening of curvature stabilization for tearing modes. This conclusion holds in particular for regimes where convection is influencing the pressure dynamics, as shown using a simple analytical model and confirmed in full Magneto-Hydro-Dynamics simulations.
Curvature and geometric modules of noncommutative spheres and tori
Arnlind, Joakim
2014-04-15
When considered as submanifolds of Euclidean space, the Riemannian geometry of the round sphere and the Clifford torus may be formulated in terms of Poisson algebraic expressions involving the embedding coordinates, and a central object is the projection operator, projecting tangent vectors in the ambient space onto the tangent space of the submanifold. In this note, we point out that there exist noncommutative analogues of these projection operators, which implies a very natural definition of noncommutative tangent spaces as particular projective modules. These modules carry an induced connection from Euclidean space, and we compute its scalar curvature.
Curvature and geometric modules of noncommutative spheres and tori
NASA Astrophysics Data System (ADS)
Arnlind, Joakim
2014-04-01
When considered as submanifolds of Euclidean space, the Riemannian geometry of the round sphere and the Clifford torus may be formulated in terms of Poisson algebraic expressions involving the embedding coordinates, and a central object is the projection operator, projecting tangent vectors in the ambient space onto the tangent space of the submanifold. In this note, we point out that there exist noncommutative analogues of these projection operators, which implies a very natural definition of noncommutative tangent spaces as particular projective modules. These modules carry an induced connection from Euclidean space, and we compute its scalar curvature.
Renormalization of curvature elastic constants for elastic and fluid membranes
NASA Astrophysics Data System (ADS)
Ami, S.; Kleinert, H.
1987-02-01
We study the fluctuations of membranes with area and curvature elasticity and calculate the renormalization of the curvature elastic constants due to thermal fluctuations. For the mean curvature elastic constant the result is the same as obtained previously for “ideal membranes” which resist only to curvature deformations. The renormalization of the gaussian curvature, on the other hand, depends on the elastic contants. In an incompressible membrane, it is five times weaker than in an ideal membrane.
Extrinsic and intrinsic curvatures in thermodynamic geometry
NASA Astrophysics Data System (ADS)
Hosseini Mansoori, Seyed Ali; Mirza, Behrouz; Sharifian, Elham
2016-08-01
We investigate the intrinsic and extrinsic curvatures of a certain hypersurface in thermodynamic geometry of a physical system and show that they contain useful thermodynamic information. For an anti-Reissner-Nordström-(A)de Sitter black hole (Phantom), the extrinsic curvature of a constant Q hypersurface has the same sign as the heat capacity around the phase transition points. The intrinsic curvature of the hypersurface can also be divergent at the critical points but has no information about the sign of the heat capacity. Our study explains the consistent relationship holding between the thermodynamic geometry of the KN-AdS black holes and those of the RN (J-zero hypersurface) and Kerr black holes (Q-zero hypersurface) ones [1]. This approach can easily be generalized to an arbitrary thermodynamic system.
Superintegrable systems on spaces of constant curvature
NASA Astrophysics Data System (ADS)
Gonera, Cezary; Kaszubska, Magdalena
2014-07-01
Construction and classification of two-dimensional (2D) superintegrable systems (i.e. systems admitting, in addition to two global integrals of motion guaranteeing the Liouville integrability, the third global and independent one) defined on 2D spaces of constant curvature and separable in the so-called geodesic polar coordinates are presented. The method proposed is applicable to any value of curvature including the case of Euclidean plane, sphere and hyperbolic plane. The main result is a generalization of Bertrand's theorem on 2D spaces of constant curvature and covers most of the known separable and superintegrable models on such spaces (in particular, the so-called Tremblay-Turbine-Winternitz (TTW) and Post-Winternitz (PW) models which have recently attracted some interest).
Curvature corrections and Kac Moody compatibility conditions
NASA Astrophysics Data System (ADS)
Damour, Thibault; Hanany, Amihay; Henneaux, Marc; Kleinschmidt, Axel; Nicolai, Hermann
2006-10-01
We study possible restrictions on the structure of curvature corrections to gravitational theories in the context of their corresponding Kac Moody algebras, following the initial work on E 10 in Damour and Nicolai [Class Quant Grav 22:2849 (2005)]. We first emphasize that the leading quantum corrections of M-theory can be naturally interpreted in terms of (non-gravity) fundamental weights of E 10. We then heuristically explore the extent to which this remark can be generalized to all over-extended algebras by determining which curvature corrections are compatible with their weight structure, and by comparing these curvature terms with known results on the quantum corrections for the corresponding gravitational theories.
Substrate Curvature Gradient Drives Rapid Droplet Motion
NASA Astrophysics Data System (ADS)
Lv, Cunjing; Chen, Chao; Chuang, Yin-Chuan; Tseng, Fan-Gang; Yin, Yajun; Grey, Francois; Zheng, Quanshui
2014-07-01
Making small liquid droplets move spontaneously on solid surfaces is a key challenge in lab-on-chip and heat exchanger technologies. Here, we report that a substrate curvature gradient can accelerate micro- and nanodroplets to high speeds on both hydrophilic and hydrophobic substrates. Experiments for microscale water droplets on tapered surfaces show a maximum speed of 0.42 m/s, 2 orders of magnitude higher than with a wettability gradient. We show that the total free energy and driving force exerted on a droplet are determined by the substrate curvature and substrate curvature gradient, respectively. Using molecular dynamics simulations, we predict nanoscale droplets moving spontaneously at over 100 m/s on tapered surfaces.
Substrate curvature gradient drives rapid droplet motion.
Lv, Cunjing; Chen, Chao; Chuang, Yin-Chuan; Tseng, Fan-Gang; Yin, Yajun; Grey, Francois; Zheng, Quanshui
2014-07-11
Making small liquid droplets move spontaneously on solid surfaces is a key challenge in lab-on-chip and heat exchanger technologies. Here, we report that a substrate curvature gradient can accelerate micro- and nanodroplets to high speeds on both hydrophilic and hydrophobic substrates. Experiments for microscale water droplets on tapered surfaces show a maximum speed of 0.42 m/s, 2 orders of magnitude higher than with a wettability gradient. We show that the total free energy and driving force exerted on a droplet are determined by the substrate curvature and substrate curvature gradient, respectively. Using molecular dynamics simulations, we predict nanoscale droplets moving spontaneously at over 100 m/s on tapered surfaces. PMID:25062213
On the curvature effect of thin membranes
NASA Astrophysics Data System (ADS)
Wang, Duo; Jiao, Xiangmin; Conley, Rebecca; Glimm, James
2013-01-01
We investigate the curvature effect of a thin, curved elastic interface that separates two subdomains and exerts a pressure due to a curvature effect. This pressure, which we refer to as interface pressure, is similar to the surface tension in fluid mechanics. It is important in some applications, such as the canopy of parachutes, biological membranes of cells, balloons, airbags, etc., as it partially balances a pressure jump between the two sides of an interface. In this paper, we show that the interface pressure is equal to the trace of the matrix product of the curvature tensor and the Cauchy stress tensor in the tangent plane. We derive the theory for interfaces in both 2-D and 3-D, and present numerical discretizations for computing the quality over triangulated surfaces.
Modulus stabilization in higher curvature dilaton gravity
NASA Astrophysics Data System (ADS)
Choudhury, Sayantan; Mitra, Joydip; SenGupta, Soumitra
2014-08-01
We propose a framework of modulus stabilization in two brane warped geometry scenario in presence of higher curvature gravity and dilaton in bulk space-time. In the prescribed setup we study various features of the stabilized potential for the modulus field, generated by a bulk scalar degrees of freedom with quartic interactions localized on the two 3-branes placed at the orbifold fixed points. We determine the parameter space for the gravidilaton and Gauss-Bonnet couplings required to stabilize the modulus in such higher curvature dilaton gravity setup.
NASTRAN modifications for recovering strains and curvatures
NASA Technical Reports Server (NTRS)
Hennrich, C. W.
1975-01-01
Modifications to the NASTRAN structural analysis computer program are described. The modifications allow the recovery of strain and curvature data for the general two-dimensional elements, in addition to the usual stress data. Option features allow the transformation of the strain/curvature (or stress) data to a common coordinate system and representation at the grid points of the structural model rather than at the conventional element center locations. Usage information is provided which will allow present users of NASTRAN to easily utilize the new capability.
Wavefront reconstruction from tangential and sagittal curvature.
Canales, Javier; Barbero, Sergio; Portilla, Javier; López-Alonso, José Manuel
2014-12-10
In a previous contribution [Appl. Opt.51, 8599 (2012)], a coauthor of this work presented a method for reconstructing the wavefront aberration from tangential refractive power data measured using dynamic skiascopy. Here we propose a new regularized least squares method where the wavefront is reconstructed not only using tangential but also sagittal curvature data. We prove that our new method provides improved quality reconstruction for typical and also for highly aberrated wavefronts, under a wide range of experimental error levels. Our method may be applied to any type of wavefront sensor (not only dynamic skiascopy) able to measure either just tangential or tangential plus sagittal curvature data. PMID:25608069
Hybrid curvature and modal wavefront sensor
NASA Astrophysics Data System (ADS)
Dong, Shihao; Haist, Tobias; Dietrich, Tom; Osten, Wolfgang
2014-09-01
The crosstalk effect considerably limits the capability of holography-based modal wavefront sensing (HMWS) when measuring wavefronts with large aberrations. In this contribution, we introduce a curvature-based measurement technique into HMWS to extend the dynamic range and the sensitivity of HMWS via a compact holographic design. If the input aberrations are large, the dominating aberration modes are first detected via curvature sensing and compensated using a wavefront correcting device, e.g. a membrane mirror. The system then switches to HMWS to obtain better sensitivity and accuracy with reduced aberrations. Different approaches for the reconstruction of the wavefront have been tested and extensive simulations for different aberrations have been analyzed.
Scaling of curvature in subcritical gravitational collapse
NASA Astrophysics Data System (ADS)
Garfinkle, David; Duncan, G. Comer
1998-09-01
We perform numerical simulations of the gravitational collapse of a spherically symmetric scalar field. For those data that just barely do not form black holes we find the maximum curvature at the position of the central observer. We find a scaling relation between this maximum curvature and distance from the critical solution. The scaling relation is analogous to that found by Choptuik for the black hole mass for those data that do collapse to form black holes. We also find a periodic wiggle in the scaling exponent.
A methodology for quantifying seated lumbar curvatures.
Leitkam, Samuel T; Bush, Tamara Reid; Li, Mingfei
2011-11-01
To understand the role seating plays in the support of posture and spinal articulation, it is necessary to study the interface between a human and the seat. However, a method to quantify lumbar curvature in commercially available unmodified seats does not currently exist. This work sought to determine if the lumbar curvature for normal ranges of seated posture could be documented by using body landmarks located on the anterior portion of the body. The development of such a methodology will allow researchers to evaluate spinal articulation of a seated subject while in standard, commercially available seats and chairs. Anterior measurements of boney landmarks were used to quantify the relative positions of the ribcage and pelvis while simultaneous posterior measurements were made of lumbar curvature. The relationship between the anterior and the posterior measures was compared. The predictive capacity of this approach was evaluated by determining linear and second-order regressions for each of the four postures across all subjects and conducting a leave-one-out cross validation. The relationships between the anterior and posterior measures were approximated by linear and second-order polynomial regressions (r(2 ) = 0.829, 0.935 respectively) across all postures. The quantitative analysis showed that openness had a significant relationship with lumbar curvature, and a first-order regression was superior to a second-order regression. Average standard errors in the prediction were 5.9° for the maximum kyphotic posture, 9.9° for the comfortable posture, 12.8° for the straight and tall, and 22.2° for the maximum lordotic posture. These results show predictions of lumbar curvature are possible in seated postures by using a motion capture system and anterior measures. This method of lumbar curvature prediction shows potential for use in the assessment of seated spinal curvatures and the corresponding design of seating to accommodate those curvatures; however
Geometrical constraint on curvature with BAO experiments
NASA Astrophysics Data System (ADS)
Takada, Masahiro; Doré, Olivier
2015-12-01
The spatial curvature (K or ΩK) is one of the most fundamental parameters of an isotropic and homogeneous universe and has a close link to the physics of the early Universe. Combining the radial and angular diameter distances measured via the baryon acoustic oscillation (BAO) experiments allows us to unambiguously constrain the curvature. The method is primarily based on the metric theory, and is less sensitive to the theory of structure formation (other than the existence of the BAO scale) and is free of any model of dark energy. In this paper, we estimate a best achievable accuracy of constraining the curvature with the BAO experiments. We show that an all-sky, cosmic-variance-limited galaxy survey covering the Universe up to z ≳4 enables a precise determination of the curvature to an accuracy of σ (ΩK)≃1 0-3. When we assume a model of dark energy—either the cosmological constraint or the (w0,wa) model—it can achieve a precision of σ (ΩK)≃a few×10-4. These forecasts require a high sampling density of galaxies, and are degraded by up to a factor of a few for a survey with a finite number density of ˜10-3 (h /Mpc )3 .
Graph Curvature for Differentiating Cancer Networks
Sandhu, Romeil; Georgiou, Tryphon; Reznik, Ed; Zhu, Liangjia; Kolesov, Ivan; Senbabaoglu, Yasin; Tannenbaum, Allen
2015-01-01
Cellular interactions can be modeled as complex dynamical systems represented by weighted graphs. The functionality of such networks, including measures of robustness, reliability, performance, and efficiency, are intrinsically tied to the topology and geometry of the underlying graph. Utilizing recently proposed geometric notions of curvature on weighted graphs, we investigate the features of gene co-expression networks derived from large-scale genomic studies of cancer. We find that the curvature of these networks reliably distinguishes between cancer and normal samples, with cancer networks exhibiting higher curvature than their normal counterparts. We establish a quantitative relationship between our findings and prior investigations of network entropy. Furthermore, we demonstrate how our approach yields additional, non-trivial pair-wise (i.e. gene-gene) interactions which may be disrupted in cancer samples. The mathematical formulation of our approach yields an exact solution to calculating pair-wise changes in curvature which was computationally infeasible using prior methods. As such, our findings lay the foundation for an analytical approach to studying complex biological networks. PMID:26169480
Constraining inverse curvature gravity with supernovae
Mena, Olga; Santiago, Jose; Weller, Jochen; /University Coll., London /Fermilab
2005-10-01
We show that the current accelerated expansion of the Universe can be explained without resorting to dark energy. Models of generalized modified gravity, with inverse powers of the curvature can have late time accelerating attractors without conflicting with solar system experiments. We have solved the Friedman equations for the full dynamical range of the evolution of the Universe. This allows us to perform a detailed analysis of Supernovae data in the context of such models that results in an excellent fit. Hence, inverse curvature gravity models represent an example of phenomenologically viable models in which the current acceleration of the Universe is driven by curvature instead of dark energy. If we further include constraints on the current expansion rate of the Universe from the Hubble Space Telescope and on the age of the Universe from globular clusters, we obtain that the matter content of the Universe is 0.07 {le} {omega}{sub m} {le} 0.21 (95% Confidence). Hence the inverse curvature gravity models considered can not explain the dynamics of the Universe just with a baryonic matter component.
Membrane Curvature Sensing by Amphipathic Helices
Jensen, Martin Borch; Bhatia, Vikram Kjøller; Jao, Christine C.; Rasmussen, Jakob Ewald; Pedersen, Søren L.; Jensen, Knud J.; Langen, Ralf; Stamou, Dimitrios
2011-01-01
Preferential binding of proteins on curved membranes (membrane curvature sensing) is increasingly emerging as a general mechanism whereby cells may effect protein localization and trafficking. Here we use a novel single liposome fluorescence microscopy assay to examine a common sensing motif, the amphipathic helix (AH), and provide quantitative measures describing and distinguishing membrane binding and sensing behavior. By studying two AH-containing proteins, α-synuclein and annexin B12, as well as a range of AH peptide mutants, we reveal that both the hydrophobic and hydrophilic faces of the helix greatly influence binding and sensing. Although increased hydrophobic and electrostatic interactions with the membrane both lead to greater densities of bound protein, the former yields membrane curvature-sensitive binding, whereas the latter is not curvature-dependent. However, the relative contributions of both components determine the sensing of AHs. In contrast, charge density in the lipid membrane seems important primarily in attracting AHs to the membrane but does not significantly influence sensing. These observations were made possible by the ability of our assay to distinguish within our samples liposomes with and without bound protein as well as the density of bound protein. Our findings suggest that the description of membrane curvature-sensing requires consideration of several factors such as short and long range electrostatic interactions, hydrogen bonding, and the volume and structure of inserted hydrophobic residues. PMID:21953452
Graph Curvature for Differentiating Cancer Networks
NASA Astrophysics Data System (ADS)
Sandhu, Romeil; Georgiou, Tryphon; Reznik, Ed; Zhu, Liangjia; Kolesov, Ivan; Senbabaoglu, Yasin; Tannenbaum, Allen
2015-07-01
Cellular interactions can be modeled as complex dynamical systems represented by weighted graphs. The functionality of such networks, including measures of robustness, reliability, performance, and efficiency, are intrinsically tied to the topology and geometry of the underlying graph. Utilizing recently proposed geometric notions of curvature on weighted graphs, we investigate the features of gene co-expression networks derived from large-scale genomic studies of cancer. We find that the curvature of these networks reliably distinguishes between cancer and normal samples, with cancer networks exhibiting higher curvature than their normal counterparts. We establish a quantitative relationship between our findings and prior investigations of network entropy. Furthermore, we demonstrate how our approach yields additional, non-trivial pair-wise (i.e. gene-gene) interactions which may be disrupted in cancer samples. The mathematical formulation of our approach yields an exact solution to calculating pair-wise changes in curvature which was computationally infeasible using prior methods. As such, our findings lay the foundation for an analytical approach to studying complex biological networks.
Stability and control of compressible flows over a surface with concave-conves curvature
NASA Technical Reports Server (NTRS)
Maestrello, L.; Bayliss, A.; Parikh, P.; Turkel, E.
1986-01-01
The active control of spatially unstable disturbances in a laminar, two-dimensional, compressible boundary layer over a curved surface is numerically simulated. The control is effected by localized time-periodic surface heating. We consider two similar surfaces of different heights with concave-convex curvature. In one, the height is sufficiently large so that the favorable pressure gradient is sufficient to stabilize a particular disturbance. In the other case the pressure gradient induced by the curvature is destabilizing. It is shown that by using active control that the disturbance can be stabilized. The results demonstrate that the curvature induced mean pressure gradient significantly enhances the receptivity of the flow localized time-periodic surface heating and that this is a potentially viable mechanism in air.
Curvature recognition and force generation in phagocytosis
2010-01-01
Background The uptake of particles by actin-powered invagination of the plasma membrane is common to protozoa and to phagocytes involved in the immune response of higher organisms. The question addressed here is how a phagocyte may use geometric cues to optimize force generation for the uptake of a particle. We survey mechanisms that enable a phagocyte to remodel actin organization in response to particles of complex shape. Results Using particles that consist of two lobes separated by a neck, we found that Dictyostelium cells transmit signals concerning the curvature of a surface to the actin system underlying the plasma membrane. Force applied to a concave region can divide a particle in two, allowing engulfment of the portion first encountered. The phagosome membrane that is bent around the concave region is marked by a protein containing an inverse Bin-Amphiphysin-Rvs (I-BAR) domain in combination with an Src homology (SH3) domain, similar to mammalian insulin receptor tyrosine kinase substrate p53. Regulatory proteins enable the phagocyte to switch activities within seconds in response to particle shape. Ras, an inducer of actin polymerization, is activated along the cup surface. Coronin, which limits the lifetime of actin structures, is reversibly recruited to the cup, reflecting a program of actin depolymerization. The various forms of myosin-I are candidate motor proteins for force generation in particle uptake, whereas myosin-II is engaged only in retracting a phagocytic cup after a switch to particle release. Thus, the constriction of a phagocytic cup differs from the contraction of a cleavage furrow in mitosis. Conclusions Phagocytes scan a particle surface for convex and concave regions. By modulating the spatiotemporal pattern of actin organization, they are capable of switching between different modes of interaction with a particle, either arresting at a concave region and applying force in an attempt to sever the particle there, or extending the cup
How to calculate normal curvatures of sampled geological surfaces
NASA Astrophysics Data System (ADS)
Bergbauer, Stephan; Pollard, David D.
2003-02-01
Curvature has been used both to describe geological surfaces and to predict the distribution of deformation in folded or domed strata. Several methods have been proposed in the geoscience literature to approximate the curvature of surfaces; however we advocate a technique for the exact calculation of normal curvature for single-valued gridded surfaces. This technique, based on the First and Second Fundamental Forms of differential geometry, allows for the analytical calculation of the magnitudes and directions of principal curvatures, as well as Gaussian and mean curvature. This approach is an improvement over previous methods to calculate surface curvatures because it avoids common mathematical approximations, which introduce significant errors when calculated over sloped horizons. Moreover, the technique is easily implemented numerically as it calculates curvatures directly from gridded surface data (e.g. seismic or GPS data) without prior surface triangulation. In geological curvature analyses, problems arise because of the sampled nature of geological horizons, which introduces a dependence of calculated curvatures on the sample grid. This dependence makes curvature analysis without prior data manipulation problematic. To ensure a meaningful curvature analysis, surface data should be filtered to extract only those surface wavelengths that scale with the feature under investigation. A curvature analysis of the top-Pennsylvanian horizon at Goose Egg dome, Wyoming shows that sampled surfaces can be smoothed using a moving average low-pass filter to extract curvature information associated with the true morphology of the structure.
Blood, Philip D.; Swenson, Richard D.; Voth, Gregory A.
2008-01-01
N-BAR domains are protein modules that bind to and induce curvature in membranes via a charged concave surface and N-terminal amphipathic helices. Recently, molecular dynamics simulations have demonstrated that the N-BAR domain can induce a strong local curvature that matches the curvature of the BAR domain surface facing the bilayer. Here we present further molecular dynamics simulations that examine in greater detail the roles of the concave surface and amphipathic helices in driving local membrane curvature. We find that the strong curvature induction observed in our previous simulations requires the stable presentation of the charged concave surface to the membrane and is not driven by the membrane-embedded amphipathic helices. Nevertheless, without these amphipathic helices embedded in the membrane, the N-BAR domain does not maintain a close association with the bilayer, and fails to drive membrane curvature. Increasing the membrane negative charge through the addition of PIP2 facilitates closer association with the membrane in the absence of embedded helices. At sufficiently high concentrations, amphipathic helices embedded in the membrane drive membrane curvature independently of the BAR domain. PMID:18469070
Improving the Sensitivity of Astronomical Curvature Wavefront Sensor Using Dual-Stroke Curvature
NASA Astrophysics Data System (ADS)
Guyon, Olivier; Blain, Celia; Takami, Hideki; Hayano, Yutaka; Hattori, Masayuki; Watanabe, Makoto
2008-06-01
Curvature wavefront sensors measure wavefront phase aberration by acquiring two intensity images on either side of the pupil plane. Low-order adaptive optics (AO) systems using curvature wavefront sensing (CWFS) have proved to be highly efficient for astronomical applications: they are more sensitive, use fewer detector elements, and achieve, for the same number of actuators, higher Strehl ratios than AO systems using more traditional Shack-Hartmann wavefront sensors. In higher-order systems, however, curvature wavefront sensors lose sensitivity to low spatial frequencies wavefront aberrations. This effect, often described as "noise propagation," limits the usefulness of curvature wavefront sensing for high-order AO systems and/or large telescopes. In this paper, we first explain how this noise propagation effect occurs and then show that this limitation can be overcome by acquiring four defocused images of the pupil instead of two. This solution can be implemented without significant technology development and can run with a simple linear wavefront reconstruction algorithm at >kHz speed. We have successfully demonstrated in the laboratory that the four conjugation planes can be sequentially obtained at >kHz speed using a speaker-vibrating membrane assembly commonly used in current curvature AO systems. Closed loop simulations show that implementing this scheme is equivalent to making the guide star 1 to 1.5 magnitude brighter for the configuration tested (188 actuator elements on 8-m telescope). Higher sensitivity gains are expected on curvature systems with higher number of actuators.
An Optical Method For Surface Curvature Testing
NASA Astrophysics Data System (ADS)
Jarisch, W.
1985-01-01
Inspection and measurement of surface quality play increasingly an important role in most machining and polishing processes. A typical example is the manufacturing of magnetic disks. The quality of a disk file essentially depends on the surface flatness of the substrate material. For many measurement aspects largearea topography variations are of less interest than high local changes of slope and curvature of the surface to be tested. Mathematically, the surface curvature is expressed as the second derivative of the profile function of the substrate, while the first derivative is known as the slope. Rapid local variations of the slope, that means high curvature values, cause high vertical accelerations of the magnetic head flying over the disk surface in fractions of a micrometer flight-height. Such irregularities of the substrate in the azimuthal disk direction would lead to uncontrolled fluctuations of the air gap between disk and head causing an attenuation of the write/read signal, to head vibrations, or even to a direct contact of the head with the disk (head crash). In the radial direction, the high-speed radial positioning of the head by voice coil driven motors also may cause a head crash at high local changes of the disk slope. Limits of the tolerable head accelerations, found by experience and theoretically by calculations, are listed in manufacturing specifications. For a fast, large area disk quality inspection and evaluation, a compact and highly sensitive measuring method has been developed. A testing tool based on this method displays the test area superimposed with a clear fringe pattern on a TV screen. The fringe pattern represents the surface curvature. From this, both components of the disk curvature, the azimuthal as well as the radial component, can be measured. Coherent optical interference and Moire techniques are the basic principles of the method providing the fringe pattern of the surface area under test. Each fringe interconnects
Curvature Dependence of Hydrophobic Hydration Dynamics
NASA Astrophysics Data System (ADS)
Weiß, R. Gregor; Heyden, Matthias; Dzubiella, Joachim
2015-05-01
We investigate the solute curvature dependence of water dynamics in the vicinity of hydrophobic spherical solutes using molecular dynamics simulations. For both the lateral and perpendicular diffusivity, as well as for H-bond kinetics of water in the first hydration shell, we find a nonmonotonic solute-size dependence, exhibiting extrema close to the well-known structural crossover length scale for hydrophobic hydration. Additionally, we find an apparent anomalous diffusion for water moving parallel to the surface of small solutes, which, however, can be explained by topology effects. Our findings regarding the intimate connection between solute curvature and water dynamics has implications for our understanding of hydration dynamics at heterogeneous biomolecular surfaces.
Cosmological signatures of anisotropic spatial curvature
NASA Astrophysics Data System (ADS)
Pereira, Thiago S.; Mena Marugán, Guillermo A.; Carneiro, Saulo
2015-07-01
If one is willing to give up the cherished hypothesis of spatial isotropy, many interesting cosmological models can be developed beyond the simple anisotropically expanding scenarios. One interesting possibility is presented by shear-free models in which the anisotropy emerges at the level of the curvature of the homogeneous spatial sections, whereas the expansion is dictated by a single scale factor. We show that such models represent viable alternatives to describe the large-scale structure of the inflationary universe, leading to a kinematically equivalent Sachs-Wolfe effect. Through the definition of a complete set of spatial eigenfunctions we compute the two-point correlation function of scalar perturbations in these models. In addition, we show how such scenarios would modify the spectrum of the CMB assuming that the observations take place in a small patch of a universe with anisotropic curvature.
Tube curvature measuring probe and method
Sokol, George J.
1990-01-01
The present invention is directed to a probe and method for measuring the radius of curvature of a bend in a section of tubing. The probe includes a member with a pair of guide means, one located at each end of the member. A strain gauge is operatively connected to the member for detecting bending stress exrted on the member as the probe is drawn through and in engagement with the inner surface of a section of tubing having a bend. The method of the present invention includes steps utilizing a probe, like the aforementioned probe, which can be made to detect bends only in a single plane when having a fixed orientation relative the section of tubing to determine the maximum radius of curvature of the bend.
Coarse-grained modeling of DNA curvature
NASA Astrophysics Data System (ADS)
Freeman, Gordon S.; Hinckley, Daniel M.; Lequieu, Joshua P.; Whitmer, Jonathan K.; de Pablo, Juan J.
2014-10-01
The interaction of DNA with proteins occurs over a wide range of length scales, and depends critically on its local structure. In particular, recent experimental work suggests that the intrinsic curvature of DNA plays a significant role on its protein-binding properties. In this work, we present a coarse grained model of DNA that is capable of describing base-pairing, hybridization, major and minor groove widths, and local curvature. The model represents an extension of the recently proposed 3SPN.2 description of DNA [D. M. Hinckley, G. S. Freeman, J. K. Whitmer, and J. J. de Pablo, J. Chem. Phys. 139, 144903 (2013)], into which sequence-dependent shape and mechanical properties are incorporated. The proposed model is validated against experimental data including melting temperatures, local flexibilities, dsDNA persistence lengths, and minor groove width profiles.
CURVATURE EFFECT QUANTIFICATION FOR IN-VIVO IR THERMOGRAPHY.
Cheng, Tze-Yuan; Deng, Daxiang; Herman, Cila
2012-01-01
Medical Infrared (IR) Imaging has become an important diagnostic tool over recent years. However, one underlying problem in medical diagnostics is associated with accurate quantification of body surface temperatures. This problem is caused by the artifacts induced by the curvature of objects, which leads to inaccurate temperature mapping and biased diagnostic results. Therefore, in our study, an experiment-based analysis is conducted to address the curvature effects toward the 3D temperature reconstruction of the IR thermography image. For quantification purposes, an isothermal copper plate with flat surface, and a cylindrical metal container filled with water are imaged. For the flat surface, the tilting angle measured from camera axis was varied incrementally from 0° to 60 °, such that the effects of surface viewing angle and travel distance on the measured temperature can be explored. On the cylindrical curved surface, the points viewed from 0° to 90° with respect to the camera axis are simultaneously imaged at different temperature levels. The experimental data obtained for the flat surface indicate that both viewing angle and distance effects become noticeable for angles over 40 °. The travel distance contributes a minor change when compared with viewing angle. The experimental results from the curved surface indicate that the curvature effect becomes pronounced when the viewing angle is larger than 60 °. The measurement error on the curved surface is compared with the simulation using the non-dielectric model, and the normalized temperature difference relative to 0° viewing angle was analyzed at six temperature levels. These results indicate that the linear formula associated with directional emissivity is a reasonable approximation for the measurement error, and the normalized error curves change consistently with viewing angle at various temperatures. Therefore, the analysis in this study implies that the directional emissivity based on the non
Induction of Plant Curvature by Magnetophoresis and Cytoskeletal Changes during Root Graviresponse
NASA Technical Reports Server (NTRS)
Hasenstein, Karl H.; Kuznetsov, Oleg A.; Blancaflor, Eilson B.
1996-01-01
High gradient magnetic fields (HGMF) induce curvature in roots and shoots. It is considered that this response is likely to be based on the intracellular displacement of bulk starch (amyloplasts) by the ponderomotive force generated by the HGMF. This process is called magnetophoresis. The differential elongation during the curvature along the concave and convex flanks of growing organs may be linked to the microtubular and/or microfilament cytoskeleton. The possible existence of an effect of the HGMF on the cytoskeleton was tested for, but none was found. The application of cytoskeletal stabilizers or depolymerizers showed that neither microtubules, nor microfilaments, are involved in the graviresponse.
Holonomy Attractor Connecting Spaces of Different Curvature Responsible for ``Anomalies''
NASA Astrophysics Data System (ADS)
Binder, Bernd
2009-03-01
In this lecture paper we derive Magic Angle Precession (MAP) from first geometric principles. MAP can arise in situations, where precession is multiply related to spin, linearly by time or distance (dynamic phase, rolling, Gauss law) and transcendentally by the holonomy loop path (geometric phase). With linear spin-precession coupling, gyroscopes can be spun up and down to very high frequencies via low frequency holonomy control induced by external accelerations, which provides for extreme coupling strengths or "anomalies" that can be tested by the powerball or gyrotwister device. Geometrically, a gyroscopic manifold with spherical metric is tangentially aligned to a precession wave channel with conic or hyperbolic metric (like the relativistic Thomas precession). Transporting triangular spin/precession vector relations across the tangential boundary of contact with SO(3) Lorentz symmetry, we get extreme vector currents near the attractor fixed points in precession phase space, where spin currents remain intact while crossing the contact boundaries between regions of different curvature signature (-1, 0, +1). The problem can be geometrically solved by considering a curvature invariant triangular condition, which holds on surfaces with different curvature that are in contact and locally parallel. In this case two out of three angles are identical, whereas the third angle is different due to holonomy. If we require that the side length ratio corresponding to these angles are invariant we get a geodesic chaotic attractor, which is a cosine map cos(x)˜Mx in parameter space providing for fixed points, limit cycle bifurcations, and singularities. The situation could be quite natural and common in the context of vector currents in curved spacetime and gauge theories. MAP could even be part of the electromagnetic interaction, where the electric charge is the geometric U(1) precession spin current and gauge potential with magnetic effects given by extra rotations under the
Intrinsically disordered proteins drive membrane curvature
NASA Astrophysics Data System (ADS)
Busch, David J.; Houser, Justin R.; Hayden, Carl C.; Sherman, Michael B.; Lafer, Eileen M.; Stachowiak, Jeanne C.
2015-07-01
Assembly of highly curved membrane structures is essential to cellular physiology. The prevailing view has been that proteins with curvature-promoting structural motifs, such as wedge-like amphipathic helices and crescent-shaped BAR domains, are required for bending membranes. Here we report that intrinsically disordered domains of the endocytic adaptor proteins, Epsin1 and AP180 are highly potent drivers of membrane curvature. This result is unexpected since intrinsically disordered domains lack a well-defined three-dimensional structure. However, in vitro measurements of membrane curvature and protein diffusivity demonstrate that the large hydrodynamic radii of these domains generate steric pressure that drives membrane bending. When disordered adaptor domains are expressed as transmembrane cargo in mammalian cells, they are excluded from clathrin-coated pits. We propose that a balance of steric pressure on the two surfaces of the membrane drives this exclusion. These results provide quantitative evidence for the influence of steric pressure on the content and assembly of curved cellular membrane structures.
Effects of wall curvature on turbulence statistics
NASA Technical Reports Server (NTRS)
Moser, R. D.; Moin, P.
1985-01-01
A three-dimensional, time-dependent, direct numerical simulation of low-Reynolds number turbulent flow in a mildly curved channel was performed, and the results examined to determine the mechanism by which curvature affects wall-bounded turbulent shear flows. A spectral numerical method with about one-million modes was employed, and no explicit subgrid scale model was used. The effects of curvature on this flow were determined by comparing the concave and convex sides of the channel. The observed effects are consistent with experimental observations for mild curvature. The most significant difference in the turbulence statistics between the concave and convex sides is in the Reynolds shear stress. This is accompanied by significant differences in the terms of the Reynolds shear stress balance equations. In addition, it was found that stationary Taylor-Goertler vortices were present and that they had a significant effect on the flow by contributing to the mean Reynolds shear stress, and by enhancing the difference between the wall shear stresses.
Superintegrable systems on spaces of constant curvature
Gonera, Cezary Kaszubska, Magdalena
2014-07-15
Construction and classification of two-dimensional (2D) superintegrable systems (i.e. systems admitting, in addition to two global integrals of motion guaranteeing the Liouville integrability, the third global and independent one) defined on 2D spaces of constant curvature and separable in the so-called geodesic polar coordinates are presented. The method proposed is applicable to any value of curvature including the case of Euclidean plane, sphere and hyperbolic plane. The main result is a generalization of Bertrand’s theorem on 2D spaces of constant curvature and covers most of the known separable and superintegrable models on such spaces (in particular, the so-called Tremblay–Turbiner–Winternitz (TTW) and Post–Winternitz (PW) models which have recently attracted some interest). -- Highlights: •Classifying 2D superintegrable, separable (polar coordinates) systems on S{sup 2}, R{sup 2}, H{sup 2}. •Construction of radial, angular potentials leading to superintegrability. •Generalization of Bertrand’s theorem covering known models, e.g. Higgs, TTW, PW, and Coulomb.
Intrinsically disordered proteins drive membrane curvature
Busch, David J.; Houser, Justin R.; Hayden, Carl C.; Sherman, Michael B.; Lafer, Eileen M.; Stachowiak, Jeanne C.
2015-01-01
Assembly of highly curved membrane structures is essential to cellular physiology. The prevailing view has been that proteins with curvature-promoting structural motifs, such as wedge-like amphipathic helices and crescent-shaped BAR domains, are required for bending membranes. Here we report that intrinsically disordered domains of the endocytic adaptor proteins, Epsin1 and AP180 are highly potent drivers of membrane curvature. This result is unexpected since intrinsically disordered domains lack a well-defined three-dimensional structure. However, in vitro measurements of membrane curvature and protein diffusivity demonstrate that the large hydrodynamic radii of these domains generate steric pressure that drives membrane bending. When disordered adaptor domains are expressed as transmembrane cargo in mammalian cells, they are excluded from clathrin-coated pits. We propose that a balance of steric pressure on the two surfaces of the membrane drives this exclusion. These results provide quantitative evidence for the influence of steric pressure on the content and assembly of curved cellular membrane structures. PMID:26204806
Multiple Manifold Clustering Using Curvature Constrained Path
Babaeian, Amir; Bayestehtashk, Alireza; Bandarabadi, Mojtaba
2015-01-01
The problem of multiple surface clustering is a challenging task, particularly when the surfaces intersect. Available methods such as Isomap fail to capture the true shape of the surface near by the intersection and result in incorrect clustering. The Isomap algorithm uses shortest path between points. The main draw back of the shortest path algorithm is due to the lack of curvature constrained where causes to have a path between points on different surfaces. In this paper we tackle this problem by imposing a curvature constraint to the shortest path algorithm used in Isomap. The algorithm chooses several landmark nodes at random and then checks whether there is a curvature constrained path between each landmark node and every other node in the neighborhood graph. We build a binary feature vector for each point where each entry represents the connectivity of that point to a particular landmark. Then the binary feature vectors could be used as a input of conventional clustering algorithm such as hierarchical clustering. We apply our method to simulated and some real datasets and show, it performs comparably to the best methods such as K-manifold and spectral multi-manifold clustering. PMID:26375819
Monolayer curvature stabilizes nanoscale raft domains in mixed lipid bilayers
Meinhardt, Sebastian; Vink, Richard L. C.; Schmid, Friederike
2013-01-01
According to the lipid raft hypothesis, biological lipid membranes are laterally heterogeneous and filled with nanoscale ordered “raft” domains, which are believed to play an important role for the organization of proteins in membranes. However, the mechanisms stabilizing such small rafts are not clear, and even their existence is sometimes questioned. Here, we report the observation of raft-like structures in a coarse-grained molecular model for multicomponent lipid bilayers. On small scales, our membranes demix into a liquid ordered (lo) phase and a liquid disordered (ld) phase. On large scales, phase separation is suppressed and gives way to a microemulsion-type state that contains nanometer-sized lo domains in an ld environment. Furthermore, we introduce a mechanism that generates rafts of finite size by a coupling between monolayer curvature and local composition. We show that mismatch between the spontaneous curvatures of monolayers in the lo and ld phases induces elastic interactions, which reduce the line tension between the lo and ld phases and can stabilize raft domains with a characteristic size of the order of a few nanometers. Our findings suggest that rafts in multicomponent bilayers might be closely related to the modulated ripple phase in one-component bilayers. PMID:23487780
Flow of an elastico-viscous liquid in a curved pipe of slowly varying curvature.
Sarin, V B
1993-03-01
Curvature forms an important feature of thoracic aorta and this paper deals with the flow of an idealized elastico-viscous liquid in a curved pipe of circular cross-section and slowly varying curvature, under a pressure gradient. The flow is assumed to be steady and at low Reynolds numbers. By using the series expansion method of Dean (Phil Mag 4 (1927) 208-223; Phil Mag 5 (1928) 673-693) in powers of a parameter L, which can be considered as the square of ratio of the centrifugal force induced by the circular motion of the fluid to the viscous force, it is shown that in a tube of increasing curvature, there will be delay in setting up of the secondary motion. The wall shear stress, an important parameter in physiological flows, is calculated. The flow of Newtonian fluid in a tube of circular cross section is discussed, as a particular case. PMID:8449591
Control of defect localization in crystalline wrinkling by curvature and topology
NASA Astrophysics Data System (ADS)
Lopez Jimenez, Francisco
We investigate the influence of curvature and topology on crystalline wrinkling patterns in generic elastic bilayers. Our numerical analysis predicts that the total number of defects created by adiabatic compression exhibits universal quadratic scaling for spherical, ellipsoidal and toroidal surfaces over a wide range of system sizes. However, both the localization of individual defects and the orientation of defect chains depend strongly on the local Gaussian curvature and its gradients across a surface. Our results imply that curvature and topology can be utilized to pattern defects in elastic materials, thus promising improved control over hierarchical bending, buckling or folding processes. Generally, this study suggests that bilayer systems provide an inexpensive yet valuable experimental test-bed for exploring the effects of geometrically induced forces on assemblies of topological charges. Joint work with Norbert Stoop, Romain Lagrange, Jorn Dunkel and Pedro M. Reis.
Calculation of free energies in fluid membranes subject to heterogeneous curvature fields
NASA Astrophysics Data System (ADS)
Agrawal, Neeraj J.; Radhakrishnan, Ravi
2009-07-01
We present a computational methodology for incorporating thermal effects and calculating relative free energies for elastic fluid membranes subject to spatially dependent intrinsic curvature fields using the method of thermodynamic integration. Based on a simple model for the intrinsic curvature imposed only in a localized region of the membrane, we employ thermodynamic integration to calculate the free-energy change as a function of increasing strength of the intrinsic curvature field and a thermodynamic cycle to compute free-energy changes for different sizes of the localized region. By explicitly computing the free-energy changes and by quantifying the loss of entropy accompanied with increasing membrane deformation, we show that the membrane stiffness increases with increasing intrinsic field, thereby, renormalizing the membrane bending rigidity. The second main conclusion of this work is that the entropy of the membrane decreases with increasing size of the localized region subject to the curvature field. Our results help to quantify the free-energy change when a planar membrane deforms under the influence of curvature-inducing proteins at a finite temperature.
Stable hypersurfaces with zero scalar curvature in Euclidean space
NASA Astrophysics Data System (ADS)
Alencar, Hilário; do Carmo, Manfredo; Neto, Gregório Silva
2016-04-01
In this paper we prove some results concerning stability of hypersurfaces in the four dimensional Euclidean space with zero scalar curvature. First we prove there is no complete stable hypersurface with zero scalar curvature, polynomial growth of integral of the mean curvature, and with the Gauss-Kronecker curvature bounded away from zero. We conclude this paper giving a sufficient condition for a regular domain to be stable in terms of the mean and the Gauss-Kronecker curvatures of the hypersurface and the radius of the smallest extrinsic ball which contains the domain.
Distributed mean curvature on a discrete manifold for Regge calculus
NASA Astrophysics Data System (ADS)
Conboye, Rory; Miller, Warner A.; Ray, Shannon
2015-09-01
The integrated mean curvature of a simplicial manifold is well understood in both Regge Calculus and Discrete Differential Geometry. However, a well motivated pointwise definition of curvature requires a careful choice of the volume over which to uniformly distribute the local integrated curvature. We show that hybrid cells formed using both the simplicial lattice and its circumcentric dual emerge as a remarkably natural structure for the distribution of this local integrated curvature. These hybrid cells form a complete tessellation of the simplicial manifold, contain a geometric orthonormal basis, and are also shown to give a pointwise mean curvature with a natural interpretation as the fractional rate of change of the normal vector.
Yoshida, Kenji; Takagi, Toshimi
1999-07-01
Experimental and numerical studies are made of transient H{sub 2}/N{sub 2}--air counterflow diffusion flames unsteadily strained by an impinging micro jet. Two-dimensional temperature measurements by laser Rayleigh scattering method and numerical computations taking into account detailed chemical kinetics are conducted paying attention to transient local extinction and reignition in relation to the unsteadiness, flame curvature and preferential diffusion effects. The results are as follows. (1) Transient local flame extinction is observed where the micro jet impinges. But, the transient flame can survive instantaneously in spite of quite high stretch rate where the steady flame cannot exist. (2) Reignition is observed after the local extinction due to the micro air jet impingement. The temperature after reignition becomes significantly higher than that of the original flame. This high temperature is induced by the concentration of H{sub 2} species due to the preferential diffusion in relation to the concave curvature. The predicted behaviors of the local transient extinction and reignition are well confirmed by the experiments. (3) The reignition is induced after the formation of combustible premixed gas mixture and the consequent flame propagation. (4) The reignition is hardly observed after the extinction by micro fuel jet impingement. This is due to the dilution of H{sub 2} species induced by the preferential diffusion in relation to the convex curvature. (5) The maximum flame temperature cannot be rationalized by the stretch rate but changes widely depending on the unsteadiness and the flame curvature in relation with preferential diffusion.
Higher Curvature Gravity in TeV-Scale Extra Dimensions
Rizzo, Thomas G.
2006-03-31
We begin a general exploration of the phenomenology of TeV-scale extra-dimensional models with gravitational actions that contain higher curvature terms. In particular, we examine how the classic collider signatures of the models of Arkani-Hamed, Dimopoulos and Dvali (missing energy and new dimension-8 contact interactions) and of Randall and Sundrum (TeV-scale graviton Kaluza-Klein resonances) are altered by these modifications to the usual Einstein-Hilbert action. We find that not only are the detailed signatures for these gravitationally induced processes altered but new contributions are found to arise due to the existence of additional scalar Kaluza-Klein states in the spectrum.
Exo70 Generates Membrane Curvature for Morphogenesis and Cell Migration
Zhao, Yuting; Liu, Jianglan; Yang, Changsong; Capraro, Benjamin R.; Baumgart, Tobias; Bradley, Ryan P.; Ramakrishnan, N.; Xu, Xiaowei; Radhakrishnan, Ravi; Svitkina, Tatyana; Guo, Wei
2013-01-01
Dynamic shape changes of the plasma membrane are fundamental to many processes ranging from morphogenesis and cell migration to phagocytosis and viral propagation. Here we demonstrate that Exo70, a component of the exocyst complex, induces tubular membrane invaginations towards the lumen of synthetic vesicles in vitro and generates protrusions on the surface of cells. Biochemical analyses using Exo70 mutants and independent molecular dynamics simulations based on Exo70 structure demonstrate that Exo70 generates negative membrane curvature through an oligomerization-based mechanism. In cells, the membrane-deformation function of Exo70 is required for protrusion formation and directional cell migration. Exo70 thus represents a membrane-bending protein that may couple actin dynamics and plasma membrane remodeling for morphogenesis. PMID:23948253
The curvature adaptive optics system modeling
NASA Astrophysics Data System (ADS)
Yang, Qiang
A curvature adaptive optics (AO) simulation system has been built. The simulation is based on the Hokupa'a-36 AO system for the NASA IRTF 3m telescope and the Hokupa'a-85 AO system for the Gemini Near Infrared Coronagraphic Imager. Several sub-models are built separately for the AO simulation system, and they are: (1) generation and propagation of atmospheric phase screens, (2) the bimorph deformable mirror (DM), (3) the curvature wave-front sensor (CWFS), (4) generation of response functions, interaction matrices and calculation of command matrices, (5) Fresnel propagation from the DM pupil to the lenslet pupil, (6) AO servo loop, and (7) post processing. The AO simulation system is then applied to the effects of DM hysteresis, and to the optimization of DM actuator patterns for the Hokupa'a-85 and Hokupa'a-36 AO systems. In the first application, an enhancing Coleman-Hodgdon model is introduced to approximate the hysteresis curves, and then the Lambert W function is introduced to calculate the inverse of the Coleman-Hodgdon equation. Step response, transfer functions and Strehl Ratios from the AO system have been compared under the cases with/without DM hysteresis. The servo-loop results show that the bandwidth of an AO system is improved greatly after the DM hysteresis is corrected. In the second application, many issues of the bimorph mirror will be considered to optimize the DM patterns, and they include the type and length of the edge benders, gap size of electrodes, DM size, and DM curvature limit.
Steering electromagnetic beams with conical curvature singularities.
Zhang, Yong-Liang; Dong, Xian-Zi; Zheng, Mei-Ling; Zhao, Zhen-Sheng; Duan, Xuan-Ming
2015-10-15
We describe how the transformation-optics technique can be used to design an effective medium mimicking the conical curvature singularity. Anholonomic coordinate transformation gives rise to linear topological defects that break the rotational symmetry. The bending and splitting of the optical beams are found analytically and numerically, depending on the incident direction and the topological charge. Beyond their practical applications to omnidirectional beam steering for photonics, our findings set forth an attractive realm to simulate the relevant physical phenomena in the optical laboratory. PMID:26469619
Constant mean curvature foliations in cosmological spacetimes.
NASA Astrophysics Data System (ADS)
Rendall, A. D.
1996-11-01
Foliations by constant mean curvature hypersurfaces provide a possibility of defining a preferred time coordinate in general relativity. In the following various conjectures are made about the existence of foliations of this kind in spacetimes satisfying the strong energy condition and possessing compact Cauchy hypersurfaces. Recent progress on proving these conjectures under supplementary assumptions is reviewed. The method of proof used is explained and the prospects for generalizing it discussed. The relations of these questions to cosmic censorship and the closed universe recollapse conjecture are pointed out.
Curvature and temperature of complex networks
NASA Astrophysics Data System (ADS)
Krioukov, Dmitri; Papadopoulos, Fragkiskos; Vahdat, Amin; Boguñá, Marián
2009-09-01
We show that heterogeneous degree distributions in observed scale-free topologies of complex networks can emerge as a consequence of the exponential expansion of hidden hyperbolic space. Fermi-Dirac statistics provides a physical interpretation of hyperbolic distances as energies of links. The hidden space curvature affects the heterogeneity of the degree distribution, while clustering is a function of temperature. We embed the internet into the hyperbolic plane and find a remarkable congruency between the embedding and our hyperbolic model. Besides proving our model realistic, this embedding may be used for routing with only local information, which holds significant promise for improving the performance of internet routing.
Curvature sensor for ocular wavefront measurement.
Díaz-Doutón, Fernando; Pujol, Jaume; Arjona, Montserrat; Luque, Sergio O
2006-08-01
We describe a new wavefront sensor for ocular aberration determination, based on the curvature sensing principle, which adapts the classical system used in astronomy for the living eye's measurements. The actual experimental setup is presented and designed following a process guided by computer simulations to adjust the design parameters for optimal performance. We present results for artificial and real young eyes, compared with the Hartmann-Shack estimations. Both methods show a similar performance for these cases. This system will allow for the measurement of higher order aberrations than the currently used wavefront sensors in situations in which they are supposed to be significant, such as postsurgery eyes. PMID:16832447
Double curvature mirrors for linear concentrators
NASA Astrophysics Data System (ADS)
Lance, Tamir; Ackler, Harold; Finot, Marc
2012-10-01
Skyline Solar's medium concentration photovoltaic system uses quasi-parabolic mirrors and one axis tracking. Improvements in levelized cost of energy can be achieved by effective management of non-uniformity of the flux line on the panels. To reduce non uniformity of the flux line due to mirror to mirror gaps, Skyline developed a dual curvature mirror that stretches the flux line along the panel. Extensive modeling and experiments have been conducted to analyze the impact of this new design and to optimize the design.
Holographic entropy increases in quadratic curvature gravity
NASA Astrophysics Data System (ADS)
Bhattacharjee, Srijit; Sarkar, Sudipta; Wall, Aron C.
2015-09-01
Standard methods for calculating the black hole entropy beyond general relativity are ambiguous when the horizon is nonstationary. We fix these ambiguities in all quadratic curvature gravity theories, by demanding that the entropy be increasing at every time, for linear perturbations to a stationary black hole. Our result matches with the entropy formula found previously in holographic entanglement entropy calculations. We explicitly calculate the entropy increase for Vaidya-like solutions in Ricci-tensor gravity to show that (unlike the Wald entropy) the holographic entropy obeys a second law.
Spacetime Curvature and Higgs Stability after Inflation.
Herranen, M; Markkanen, T; Nurmi, S; Rajantie, A
2015-12-11
We investigate the dynamics of the Higgs field at the end of inflation in the minimal scenario consisting of an inflaton field coupled to the standard model only through the nonminimal gravitational coupling ξ of the Higgs field. Such a coupling is required by renormalization of the standard model in curved space, and in the current scenario also by vacuum stability during high-scale inflation. We find that for ξ≳1, rapidly changing spacetime curvature at the end of inflation leads to significant production of Higgs particles, potentially triggering a transition to a negative-energy Planck scale vacuum state and causing an immediate collapse of the Universe. PMID:26705621
Amplification of curvature perturbations in cyclic cosmology
Zhang Jun; Liu Zhiguo; Piao Yunsong
2010-12-15
We analytically and numerically show that through the cycles with nonsingular bounce, the amplitude of curvature perturbation on a large scale will be amplified and the power spectrum will redden. In some sense, this amplification will eventually destroy the homogeneity of the background, which will lead to the ultimate end of cycles of the global universe. We argue that for the model with increasing cycles, it might be possible that a fissiparous multiverse will emerge after one or several cycles, in which the cycles will continue only at corresponding local regions.
NASA Astrophysics Data System (ADS)
Liu, Huilian; Li, Weijun; Li, Hongbo; Sun, Yunfei; Song, Junlin; Yang, Jinghai; Gao, Ming; Liu, Xiaoyan
2015-07-01
The influence of substrate curvature on structural, optical properties of Cu, Co codoped ZnO thin films were investigated in this study. XRD analysis indicated that the crystal quality of the ZnO films could been influenced by the substrate curvature. The biaxial stress of our samples was measured by side-inclination X-ray diffraction technique. The results indicated that the type of the stress was biaxial compressive stress. Optical absorption spectra showed the absorption edge of our samples displayed blueshift with decreasing substrate curvature. Gauss fit for PL emission spectra showed that the substrate curvature affected the PL properties of the Cu, Co codoped ZnO thin films deposited on polystyrene particles. The various substrates induced defect-related emission increased in visible region.
A PH domain in ACAP1 possesses key features of the BAR domain in promoting membrane curvature.
Pang, Xiaoyun; Fan, Jun; Zhang, Yan; Zhang, Kai; Gao, Bingquan; Ma, Jun; Li, Jian; Deng, Yuchen; Zhou, Qiangjun; Egelman, Edward H; Hsu, Victor W; Sun, Fei
2014-10-13
The BAR (Bin-Amphiphysin-Rvs) domain undergoes dimerization to produce a curved protein structure, which superimposes onto membrane through electrostatic interactions to sense and impart membrane curvature. In some cases, a BAR domain also possesses an amphipathic helix that inserts into the membrane to induce curvature. ACAP1 (Arfgap with Coil coil, Ankyrin repeat, and PH domain protein 1) contains a BAR domain. Here, we show that this BAR domain can neither bind membrane nor impart curvature, but instead requires a neighboring PH (Pleckstrin Homology) domain to achieve these functions. Specific residues within the PH domain are responsible for both membrane binding and curvature generation. The BAR domain adjacent to the PH domain instead interacts with the BAR domains of neighboring ACAP1 proteins to enable clustering at the membrane. Thus, we have uncovered the molecular basis for an unexpected and unconventional collaboration between PH and BAR domains in membrane bending. PMID:25284369
Local curvature measurements of a lean, partially premixed swirl-stabilised flame
NASA Astrophysics Data System (ADS)
Bayley, Alan E.; Hardalupas, Yannis; Taylor, Alex M. K. P.
2012-04-01
A swirl-stabilised, lean, partially premixed combustor operating at atmospheric conditions has been used to investigate the local curvature distributions in lifted, stable and thermoacoustically oscillating CH4-air partially premixed flames for bulk cold-flow Reynolds numbers of 15,000 and 23,000. Single-shot OH planar laser-induced fluorescence has been used to capture instantaneous images of these three different flame types. Use of binary thresholding to identify the reactant and product regions in the OH planar laser-induced fluorescence images, in order to extract accurate flame-front locations, is shown to be unsatisfactory for the examined flames. The Canny-Deriche edge detection filter has also been examined and is seen to still leave an unacceptable quantity of artificial flame-fronts. A novel approach has been developed for image analysis where a combination of a non-linear diffusion filter, Sobel gradient and threshold-based curve elimination routines have been used to extract traces of the flame-front to obtain local curvature distributions. A visual comparison of the effectiveness of flame-front identification is made between the novel approach, the threshold binarisation filter and the Canny-Deriche filter. The novel approach appears to most accurately identify the flame-fronts. Example histograms of the curvature for six flame conditions and of the total image area are presented and are found to have a broader range of local flame curvatures for increasing bulk Reynolds numbers. Significantly positive values of mean curvature and marginally positive values of skewness of the histogram have been measured for one lifted flame case, but this is generally accounted for by the effect of flame brush curvature. The mean local flame-front curvature reduces with increasing axial distance from the burner exit plane for all flame types. These changes are more pronounced in the lifted flames but are marginal for the thermoacoustically oscillating flames. It is
Turbulent boundary layers subjected to multiple curvatures and pressure gradients
NASA Technical Reports Server (NTRS)
Bandyopadhyay, Promode R.; Ahmed, Anwar
1993-01-01
The effects of abruptly applied cycles of curvatures and pressure gradients on turbulent boundary layers are examined experimentally. Two two-dimensional curved test surfaces are considered: one has a sequence of concave and convex longitudinal surface curvatures and the other has a sequence of convex and concave curvatures. The choice of the curvature sequences were motivated by a desire to study the asymmetric response of turbulent boundary layers to convex and concave curvatures. The relaxation of a boundary layer from the effects of these two opposite sequences has been compared. The effect of the accompaying sequences of pressure gradient has also been examined but the effect of curvature dominates. The growth of internal layers at the curvature junctions have been studied. Measurements of the Gortler and corner vortex systems have been made. The boundary layer recovering from the sequence of concave to convex curvature has a sustained lower skin friction level than in that recovering from the sequence of convex to concave curvature. The amplification and suppression of turbulence due to the curvature sequences have also been studied.
Effects of streamline curvature on separation prediction
NASA Astrophysics Data System (ADS)
Arolla, Sunil K.; Durbin, Paul A.
2009-11-01
In this study, the effects of streamline curvature on prediction of flow separation are investigated. The geometry is a circulation control airfoil, a high-lift configuration that has been under extensive research for more than two decades. A tangential jet is blown over a thick, rounded trailing edge, using the Coanda effect to delay separation. An attempt is made to understand, through numerical simulations, the dynamics of turbulent separation and reattachment on the Coanda surface. Highly curved, attached recirculation regions are seen to form. A physics based curvature correction proposed by Pettersson-Reif et al. (1999) is used in conjunction with ζ-f turbulence model. The chord-based Reynolds number is Re = 10^6. Two jet momentum coefficients of Cμ=0.03 and 0.1 are computed. In this paper, comparisons between the computed and experimental pressure distributions, velocity profiles and the position of flow detachment are presented. Comparisons with other closures such as Menter's SST model are also discussed.
Detonation Front Curvatures and Detonation Rates
NASA Astrophysics Data System (ADS)
Lauderbach, Lisa M.; Lorenz, K. Thomas; Lee, Edward L.; Souers, P. Clark
2015-06-01
We have normalized the LLNL library of detonation front curvatures by dividing lags by the edge lag and radii by the edge radius. We then fit the normalized data to the equation L = AR2 + BR8, where L is the normalized lag and R is the normalized radius. We attribute the quadratic term to thermal processes and the 8th-power term to shock processes. We compare the % of the quadratic term J at the edge with detonation rates obtained from the size effect. One class of results is made up of fine-grained, uniform explosives with large lags, where a low detonation rate leads to a high J and vice versa. This provides a rough way of estimating unknown rates if the unknown explosive is of high quality. The other, equally-large class contains rough-grained materials, often with small lags and small radii. These have curves that do not fit the equation but superfically often look quadratic. Some HMX and PETN curvatures even show a ``sombrero'' effect. Code models show that density differences of 0.03 g/cc in ram-pressed parts can cause pseudo-quadratic curves and even sombreros. Modeling is used to illustrate J at the lowest and highest possible detonation rates. This work performed under the auspices of the U. S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.
Kinetic information from detonation front curvature
Souers, P. C., LLNL
1998-06-15
The time constants for time-dependent modeling may be estimated from reaction zone lengths, which are obtained from two sources One is detonation front curvature, where the edge lag is close to being a direct measure The other is the Size Effect, where the detonation velocity decreases with decreasing radius as energy is lost to the cylinder edge A simple theory that interlocks the two effects is given A differential equation for energy flow in the front is used, the front is described by quadratic and sixth-power radius terms The quadratic curvature comes from a constant power source of energy moving sideways to the walls Near the walls, the this energy rises to the total energy of detonation and produces the sixth-power term The presence of defects acting on a short reaction zone can eliminate the quadratic part while leaving the wall portion of the cuvature A collection of TNT data shows that the reaction zone increases with both the radius and the void fraction
Particles and curvatures in nematic liquid crystals
NASA Astrophysics Data System (ADS)
Serra, Francesca; Luo, Yimin; Yang, Shu; Kamien, Randall D.; Stebe, Kathleen J.
Elastic interactions in anisotropic fluids can be harnessed to direct particle interactions. A strategy to smoothly manipulate the director field in nematic liquid crystals is to vary the topography of the bounding surfaces. A rugged landscape with peaks and valleys create local deformations of the director field which can interact with particles in solution. We study this complex interaction in two different settings. The first consists of an array of shallow pores in a poly-dimethyl-siloxane (PDMS) membrane, whose curvature can be tuned either by swelling the PDMS membrane or by mechanical stretching. The second is a set of grooves with wavy walls, fabricated by photolithography, with various parameters of curvature and shapes. In this contexts we study how the motion of colloidal particles in nematic liquid crystals can be influenced by their interaction with the peaks and valleys of the bottom substrate or of the side walls. Particles with different associated topological defects (hedgehogs or Saturn rings) behave differently as they interact with the topographical features, favoring the docking on peaks or valleys. These experimental systems are also ideal to study the ``lock and key'' mechanism of particles in holes and to investigate a possible route for particle sorting.
Vortex motion on surfaces of small curvature
Dorigoni, Daniele Dunajski, Maciej Manton, Nicholas S.
2013-12-15
We consider a single Abelian Higgs vortex on a surface Σ whose Gaussian curvature K is small relative to the size of the vortex, and analyse vortex motion by using geodesics on the moduli space of static solutions. The moduli space is Σ with a modified metric, and we propose that this metric has a universal expansion, in terms of K and its derivatives, around the initial metric on Σ. Using an integral expression for the Kähler potential on the moduli space, we calculate the leading coefficients of this expansion numerically, and find some evidence for their universality. The expansion agrees to first order with the metric resulting from the Ricci flow starting from the initial metric on Σ, but differs at higher order. We compare the vortex motion with the motion of a point particle along geodesics of Σ. Relative to a particle geodesic, the vortex experiences an additional force, which to leading order is proportional to the gradient of K. This force is analogous to the self-force on bodies of finite size that occurs in gravitational motion. -- Highlights: •We study an Abelian Higgs vortex on a surface with small curvature. •A universal expansion for the moduli space metric is proposed. •We numerically check the universality at low orders. •Vortex motion differs from point particle motion because a vortex has a finite size. •Moduli space geometry has similarities with the geometry arising from Ricci flow.
Asymptotic behavior of curvature of surface elements in isotropic turbulence
NASA Technical Reports Server (NTRS)
Girimaji, S. S.
1991-01-01
The asymptotic behavior of the curvature of material elements in turbulence is investigated using Lagrangian velocity-gradient time series obtained from direct numerical simulations of isotropic turbulence. Several material-element ensembles of different initial curvatures and shapes are studied. It is found that, at long times, the (first five) moments of the logarithm of characteristic curvature and shape factor asymptote to values that are independent of the initial curvature or shape. This evidence strongly suggests that the asymptotic pdf's of the curvature and shape of material elements are stationary and independent of initial conditions. Irrespective of initial curvature or shape, the asymptotic shape of a material surface is cylindrical with a high probability.
Eddy-Current Measurement Of Turning Or Curvature
NASA Technical Reports Server (NTRS)
Chern, Engmin J.
1993-01-01
Rotatable conductive plate covers sensing coil to varying degree. Curvature of pipe at remote or otherwise inaccessible location inside pipe measured using relatively simple angular-displacement eddy-current probe. Crawler and sensor assemblies move along inside of pipe on wheels. Conductive plate pivots to follow curvature of pipe, partly covering one of eddy-current coils to degree depending on local curvature on pipe.
Compact surfaces of constant Gaussian curvature in Randers manifolds
NASA Astrophysics Data System (ADS)
Cui, Ningwei
2016-08-01
The flag curvature of a Finsler surface is called the Gaussian curvature in Finsler geometry. In this paper, we characterize the surfaces of constant Gaussian curvature (CGC) in the Randers 3-manifold. Then we give a classification of the orientable closed CGC surfaces in two Randers space forms, which are the non-Euclidean Minkowski-Randers 3-space (K = 0) and the Bao-Shen sphere (K = 1).
Evolution of the curvature perturbations during warm inflation
Matsuda, Tomohiro
2009-06-15
This paper considers warm inflation as an interesting application of multi-field inflation. Delta-N formalism is used for the calculation of the evolution of the curvature perturbations during warm inflation. Although the perturbations considered in this paper are decaying after the horizon exit, the corrections to the curvature perturbations sourced by these perturbations can remain and dominate the curvature perturbations at large scales. In addition to the typical evolution of the curvature perturbations, inhomogeneous diffusion rate is considered for warm inflation, which may lead to significant non-Gaussianity of the spectrum.
Mean Curvature Flow in a Ricci Flow Background
NASA Astrophysics Data System (ADS)
Lott, John
2012-07-01
Following work of Ecker (Comm Anal Geom 15:1025-1061, 2007), we consider a weighted Gibbons-Hawking-York functional on a Riemannian manifold-with-boundary. We compute its variational properties and its time derivative under Perelman's modified Ricci flow. The answer has a boundary term which involves an extension of Hamilton's differential Harnack expression for the mean curvature flow in Euclidean space. We also derive the evolution equations for the second fundamental form and the mean curvature, under a mean curvature flow in a Ricci flow background. In the case of a gradient Ricci soliton background, we discuss mean curvature solitons and Huisken monotonicity.
Plane wave gravitons, curvature singularities and string physics
Brooks, R. . Center for Theoretical Physics)
1991-03-21
This paper discusses bounded (compactifying) potentials arising from a conspiracy between plane wave graviton and dilaton condensates. So are string propagation and supersymmetry in spacetimes with curvature singularities.
Hawking temperature of constant curvature black holes
Cai Ronggen; Myung, Yun Soo
2011-05-15
The constant curvature (CC) black holes are higher dimensional generalizations of Banados-Teitelboim-Zanelli black holes. It is known that these black holes have the unusual topology of M{sub D-1}xS{sup 1}, where D is the spacetime dimension and M{sub D-1} stands for a conformal Minkowski spacetime in D-1 dimensions. The unusual topology and time-dependence for the exterior of these black holes cause some difficulties to derive their thermodynamic quantities. In this work, by using a globally embedding approach, we obtain the Hawking temperature of the CC black holes. We find that the Hawking temperature takes the same form when using both the static and global coordinates. Also, it is identical to the Gibbons-Hawking temperature of the boundary de Sitter spaces of these CC black holes.
Natural curvature for manifest T-duality
NASA Astrophysics Data System (ADS)
Poláček, Martin; Siegel, Warren
2014-01-01
We reformulate the manifestly T-dual description of the massless sector of the closed bosonic string, directly from the geometry associated with the (left and right) affine Lie algebra of the coset space Poincaré/Lorentz. This construction initially doubles not only the (spacetime) coordinates for translations but also those for Lorentz transformations (and their "dual"). As a result, the Lorentz connection couples directly to the string (as does the vielbein), rather than being introduced ad hoc to the covariant derivative as previously. This not only reproduces the old definition of T-dual torsion, but automatically gives a general, covariant definition of T-dual curvature (but still with some undetermined connections).
Wang, Wangchen; Yang, Lin; Huang, Huey W.
2007-01-01
Recent experiments suggested that cholesterol and other lipid components of high negative spontaneous curvature facilitate membrane fusion. This is taken as evidence supporting the stalk-pore model of membrane fusion in which the lipid bilayers go through intermediate structures of high curvature. How do the high-curvature lipid components lower the free energy of the curved structure? Do the high-curvature lipid components modify the average spontaneous curvature of the relevant monolayer, thereby facilitate its bending, or do the lipid components redistribute in the curved structure so as to lower the free energy? This question is fundamental to the curvature elastic energy for lipid mixtures. Here we investigate the lipid distribution in a monolayer of a binary lipid mixture before and after bending, or more precisely in the lamellar, hexagonal, and distorted hexagonal phases. The lipid mixture is composed of 2:1 ratio of brominated di18:0PC and cholesterol. Using a newly developed procedure for the multiwavelength anomalous diffraction method, we are able to isolate the bromine distribution and reconstruct the electron density distribution of the lipid mixture in the three phases. We found that the lipid distribution is homogenous and uniform in the lamellar and hexagonal phases. But in the distorted hexagonal phase, the lipid monolayer has nonuniform curvature, and cholesterol almost entirely concentrates in the high curvature region. This finding demonstrates that the association energies between lipid molecules vary with the curvature of membrane. Thus, lipid components in a mixture may redistribute under conditions of nonuniform curvature, such as in the stalk structure. In such cases, the spontaneous curvature depends on the local lipid composition and the free energy minimum is determined by lipid distribution as well as curvature. PMID:17259270
Soil Moisture, Coastline Curvature, and Sea Breeze Initiated Precipitation Over Florida
NASA Technical Reports Server (NTRS)
Baker, R. David; Lynn, Barry H.; Boone, Aaron; Tao, Wei-Kuo
1999-01-01
Land surface-atmosphere interaction plays a key role in the development of summertime convection and precipitation over the Florida peninsula. Land-ocean temperature contrasts induce sea-breeze circulations along both coasts. Clouds develop along sea-breeze fronts, and significant precipitation can occur during the summer months. However, other factors such as soil moisture distribution and coastline curvature may modulate the timing, location, and intensity of sea breeze initiated precipitation. Here, we investigate the role of soil moisture and coastline curvature on Florida precipitation using the 3-D Goddard Cumulus Ensemble (GCE) cloud model coupled with the Parameterization for Land-Atmosphere-Cloud Exchange (PLACE) land surface model. This study utilizes data from the Convection and Precipitation Electrification Experiment (CaPE) collected on 27 July 1991. Our numerical simulations suggest that a realistic distribution of soil moisture influences the location and intensity of precipitation but not the timing of precipitation. In contrast, coastline curvature affects the timing and location of precipitation but has little influence on peak rainfall rates. However, both factors (soil moisture and coastline curvature) are required to fully account for observed rainfall amounts.
Holographic curvature perturbations in a cosmology with a space-like singularity
NASA Astrophysics Data System (ADS)
Ferreira, Elisa G. M.; Brandenberger, Robert
2016-07-01
We study the evolution of cosmological perturbations in an anti-de-Sitter (AdS) bulk through a cosmological singularity by mapping the dynamics onto the boundary conformal fields theory by means of the AdS/CFT correspondence. We consider a deformed AdS space-time obtained by considering a time-dependent dilaton which induces a curvature singularity in the bulk at a time which we call t = 0, and which asymptotically approaches AdS both for large positive and negative times. The boundary field theory becomes free when the bulk curvature goes to infinity. Hence, the evolution of the fluctuations is under better controle on the boundary than in the bulk. To avoid unbounded particle production across the bounce it is necessary to smooth out the curvature singularity at very high curvatures. We show how the bulk cosmological perturbations can be mapped onto boundary gauge field fluctuations. We evolve the latter and compare the spectrum of fluctuations on the infrared scales relevant for cosmological observations before and after the bounce point. We find that the index of the power spectrum of fluctuations is the same before and after the bounce.
Molecular Modeling of Lipid Membrane Curvature Induction by a Peptide: More than Simply Shape
Sodt, Alexander J.; Pastor, Richard W.
2014-01-01
Molecular dynamics simulations of an amphipathic helix embedded in a lipid bilayer indicate that it will induce substantial positive curvature (e.g., a tube of diameter 20 nm at 16% surface coverage). The induction is twice that of a continuum model prediction that only considers the shape of the inclusion. The discrepancy is explained in terms of the additional presence of specific interactions described only by the molecular model. The conclusion that molecular shape alone is insufficient to quantitatively model curvature is supported by contrasting molecular and continuum models of lipids with large and small headgroups (choline and ethanolamine, respectively), and of the removal of a lipid tail (modeling a lyso-lipid). For the molecular model, curvature propensity is analyzed by computing the derivative of the free energy with respect to bending. The continuum model predicts that the inclusion will soften the bilayer near the headgroup region, an effect that may weaken curvature induction. The all-atom predictions are consistent with experimental observations of the degree of tubulation by amphipathic helices and variation of the free energy of binding to liposomes. PMID:24806928
Effects of curvature on asymmetric steady states in catalyst particles
Lucier, B J
1981-02-01
The effects of curvature on steady states of chemical catalytic reactions are investigated by studying the cases of the catalytic particle being a spherical or cylindrical shell. Existence and stability of solutions are studied. It is shown that the solutions converge to the solutions for the catalytic slab when the curvature goes to 0 in each case.
An analytical approach to estimate curvature effect of coseismic deformations
NASA Astrophysics Data System (ADS)
Dong, Jie; Sun, Wenke; Zhou, Xin; Wang, Rongjiang
2016-06-01
We present an analytical approach to compute the curvature effect by the new analytical solutions of co-seismic deformation derived for the homogeneous sphere model. We consider two spheres with different radii: one is the same as earth, the other with a larger radius can approximate a half-space model. Then, we calculate the co-seismic displacements for the two spheres and define the relative percentage of the displacements as the curvature effect. The near-field curvature effect is defined relative to the maximum co-seismic displacement. The results show that the maximum curvature effect is about 4% for source depths of less than 100 km, and about 30% for source depths of less than 600 km. For the far-field curvature effect, we define it relative to the observing point. The curvature effect is extremely large and sometimes exceeds 100%. Moreover, this new approach can be used to estimate any planet's curvature effect quantitatively. For a smaller sphere, such as the Moon, the curvature effect is much larger than that of the Earth, with an inverse ratio to the earth's radius.
Coherent gradient sensing method and system for measuring surface curvature
NASA Technical Reports Server (NTRS)
Rosakis, Ares J. (Inventor); Singh, Ramen P. (Inventor); Kolawa, Elizabeth (Inventor); Moore, Jr., Nicholas R. (Inventor)
2000-01-01
A system and method for determining a curvature of a specularly reflective surface based on optical interference. Two optical gratings are used to produce a spatial displacement in an interference field of two different diffraction components produced by one grating from different diffraction components produced by another grating. Thus, the curvature of the surface can be determined.
Determination of Radius of Curvature for Teeth With Cycloid Profile
NASA Astrophysics Data System (ADS)
Shatalov, E. V.; Efremenkov, E. A.; Shibinskiy, K. G.
2016-04-01
In the article the geometric determination of curvature radius is considered for teeth with cycloid profile. The equations are obtained for the determination of a radius of curvature with point coordinates of a cycloid profile. The conditions of convexo-concavity of a teeth profile are defined for transmission with intermediate rollers.
An analytical approach to estimate curvature effect of coseismic deformations
NASA Astrophysics Data System (ADS)
Dong, Jie; Sun, Wenke; Zhou, Xin; Wang, Rongjiang
2016-08-01
We present an analytical approach to compute the curvature effect by the new analytical solutions of coseismic deformation derived for the homogeneous sphere model. We consider two spheres with different radii: one is the same as earth and the other with a larger radius can approximate a half-space model. Then, we calculate the coseismic displacements for the two spheres and define the relative percentage of the displacements as the curvature effect. The near-field curvature effect is defined relative to the maximum coseismic displacement. The results show that the maximum curvature effect is about 4 per cent for source depths of less than 100 km, and about 30 per cent for source depths of less than 600 km. For the far-field curvature effect, we define it relative to the observing point. The curvature effect is extremely large and sometimes exceeds 100 per cent. Moreover, this new approach can be used to estimate any planet's curvature effect quantitatively. For a smaller sphere, such as the Moon, the curvature effect is much larger than that of the Earth, with an inverse ratio to the earth's radius.
Effects of Iris Surface Curvature on Iris Recognition
Thompson, Joseph T; Flynn, Patrick J; Bowyer, Kevin W; Santos-Villalobos, Hector J
2013-01-01
To focus on objects at various distances, the lens of the eye must change shape to adjust its refractive power. This change in lens shape causes a change in the shape of the iris surface which can be measured by examining the curvature of the iris. This work isolates the variable of iris curvature in the recognition process and shows that differences in iris curvature degrade matching ability. To our knowledge, no other work has examined the effects of varying iris curvature on matching ability. To examine this degradation, we conduct a matching experiment across pairs of images with varying degrees of iris curvature differences. The results show a statistically signi cant degradation in matching ability. Finally, the real world impact of these ndings is discussed
Nastic curvatures of wheat coleoptiles that develop in true microgravity
NASA Technical Reports Server (NTRS)
Heathcote, D. G.; Chapman, D. K.; Brown, A. H.
1995-01-01
Dark-grown wheat coleoptiles developed strong curvatures within 5 h of being transferred in orbit from a 1 g centrifuge to microgravity during an experiment flown on the IML-1 shuttle mission. The curving tendency was strongest in seedlings that were immature, with coleoptiles shorter than 10 mm at the time of transfer. The curvature direction was non-random, and directed away from the caryopsis (the coleptile face adjacent to the caryopsis becoming convex). The curvatures were most marked in the basal third of the coleoptiles, contrasting with phototropic responses, which occur in the apical third. We interpret these curvatures as being nastic, and related to the curvatures commonly reported to occur during clinostat rotation treatments.
Elliptic inflation: generating the curvature perturbation without slow-roll
NASA Astrophysics Data System (ADS)
Matsuda, Tomohiro
2006-09-01
There are many inflationary models in which the inflaton field does not satisfy the slow-roll condition. However, in such models, it is always difficult to generate the curvature perturbation during inflation. Thus, to generate the curvature perturbation, one must introduce another component into the theory. To cite a case, curvatons may generate the dominant part of the curvature perturbation after inflation. However, we question whether it is realistic to consider the generation of the curvature perturbation during inflation without slow-roll. Assuming multifield inflation, we encounter the generation of curvature perturbation during inflation without slow-roll. The potential along the equipotential surface is flat by definition and thus we do not have to worry about symmetry. We also discuss KKLT (Kachru Kallosh Linde Trivedi) models, in which corrections lifting the inflationary direction may not become a serious problem if there is a symmetry enhancement at the tip (not at the moving brane) of the inflationary throat.
Curvature-processing network in macaque visual cortex
Yue, Xiaomin; Pourladian, Irene S.; Tootell, Roger B. H.; Ungerleider, Leslie G.
2014-01-01
Our visual environment abounds with curved features. Thus, the goal of understanding visual processing should include the processing of curved features. Using functional magnetic resonance imaging in behaving monkeys, we demonstrated a network of cortical areas selective for the processing of curved features. This network includes three distinct hierarchically organized regions within the ventral visual pathway: a posterior curvature-biased patch (PCP) located in the near-foveal representation of dorsal V4, a middle curvature-biased patch (MCP) located on the ventral lip of the posterior superior temporal sulcus (STS) in area TEO, and an anterior curvature-biased patch (ACP) located just below the STS in anterior area TE. Our results further indicate that the processing of curvature becomes increasingly complex from PCP to ACP. The proximity of the curvature-processing network to the well-known face-processing network suggests a possible functional link between them. PMID:25092328
NASA Astrophysics Data System (ADS)
Torgoev, Almaz; Havenith, Hans-Balder
2016-01-01
A 2D elasto-dynamic modelling of the pure topographic seismic response is performed for six models with a total length of around 23.0 km. These models are reconstructed from the real topographic settings of the landslide-prone slopes situated in the Mailuu-Suu River Valley, Southern Kyrgyzstan. The main studied parameter is the Arias Intensity (Ia, m/sec), which is applied in the GIS-based Newmark method to regionally map the seismically-induced landslide susceptibility. This method maps the Ia values via empirical attenuation laws and our studies investigate a potential to include topographic input into them. Numerical studies analyse several signals with varying shape and changing central frequency values. All tests demonstrate that the spectral amplification patterns directly affect the amplification of the Ia values. These results let to link the 2D distribution of the topographically amplified Ia values with the parameter called as smoothed curvature. The amplification values for the low-frequency signals are better correlated with the curvature smoothed over larger spatial extent, while those values for the high-frequency signals are more linked to the curvature with smaller smoothing extent. The best predictions are provided by the curvature smoothed over the extent calculated according to Geli's law. The sample equations predicting the Ia amplification based on the smoothed curvature are presented for the sinusoid-shape input signals. These laws cannot be directly implemented in the regional Newmark method, as 3D amplification of the Ia values addresses more problem complexities which are not studied here. Nevertheless, our 2D results prepare the theoretical framework which can potentially be applied to the 3D domain and, therefore, represent a robust basis for these future research targets.
NASA Astrophysics Data System (ADS)
Torgoev, Almaz; Havenith, Hans-Balder
2016-07-01
A 2D elasto-dynamic modelling of the pure topographic seismic response is performed for six models with a total length of around 23.0 km. These models are reconstructed from the real topographic settings of the landslide-prone slopes situated in the Mailuu-Suu River Valley, Southern Kyrgyzstan. The main studied parameter is the Arias Intensity (Ia, m/sec), which is applied in the GIS-based Newmark method to regionally map the seismically-induced landslide susceptibility. This method maps the Ia values via empirical attenuation laws and our studies investigate a potential to include topographic input into them. Numerical studies analyse several signals with varying shape and changing central frequency values. All tests demonstrate that the spectral amplification patterns directly affect the amplification of the Ia values. These results let to link the 2D distribution of the topographically amplified Ia values with the parameter called as smoothed curvature. The amplification values for the low-frequency signals are better correlated with the curvature smoothed over larger spatial extent, while those values for the high-frequency signals are more linked to the curvature with smaller smoothing extent. The best predictions are provided by the curvature smoothed over the extent calculated according to Geli's law. The sample equations predicting the Ia amplification based on the smoothed curvature are presented for the sinusoid-shape input signals. These laws cannot be directly implemented in the regional Newmark method, as 3D amplification of the Ia values addresses more problem complexities which are not studied here. Nevertheless, our 2D results prepare the theoretical framework which can potentially be applied to the 3D domain and, therefore, represent a robust basis for these future research targets.
Nonlinear diffusion filtering influenced by mean curvature
NASA Astrophysics Data System (ADS)
Kollár, Michal; Mikula, Karol; Čunderlík, Róbert
2016-04-01
The presentation introduces a new nonlinear diffusion filtering method on closed surfaces such as a sphere, ellipsoid or the Earth's surface. Our new model extends the regularized surface Perona-Malik model by including a local extrema detector based on a mean curvature of processed data. The model is thus represented by a nonlinear diffusion equation which filters noise while preserves main edges, local extrema and details important for a correct interpretation of data. We define a surface finite-volume method to approximate numerically the nonlinear parabolic partial differential equation on a closed surface. The closed surface is approximated by a polyhedral surface created by planar triangles representing subdivision of an initial icosahedron grid and we use a piece-wise linear approximation of a solution in space and the backward Euler time discretization. Numerical experiments present nonlinear diffusion filtering of artificial data and real measurements, namely the GOCE satellite observations. They aim to point out a main advantage of the new nonlinear model which, on the contrary of Perona-Malik model, preserves local extremal values of filtered data.
Characterizing repulsive gravity with curvature eigenvalues
NASA Astrophysics Data System (ADS)
Luongo, Orlando; Quevedo, Hernando
2014-10-01
Repulsive gravity has been investigated in several scenarios near compact objects by using different intuitive approaches. Here, we propose an invariant method to characterize regions of repulsive gravity, associated to black holes and naked singularities. Our method is based upon the behavior of the curvature tensor eigenvalues, and leads to an invariant definition of a repulsion radius. The repulsion radius determines a physical region, which can be interpreted as a repulsion sphere, where the effects due to repulsive gravity naturally arise. Further, we show that the use of effective masses to characterize repulsion regions can lead to coordinate-dependent results whereas, in our approach, repulsion emerges as a consequence of the spacetime geometry in a completely invariant way. Our definition is tested in the spacetime of an electrically charged Kerr naked singularity and in all its limiting cases. We show that a positive mass can generate repulsive gravity if it is equipped with an electric charge or an angular momentum. We obtain reasonable results for the spacetime regions contained inside the repulsion sphere whose size and shape depend on the value of the mass, charge and angular momentum. Consequently, we define repulsive gravity as a classical relativistic effect by using the geometry of spacetime only.