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Sample records for polarized cu k-edge

  1. Amyloid-β peptide active site: theoretical Cu K-edge XANES study

    NASA Astrophysics Data System (ADS)

    Chaynikov, A. P.; Soldatov, M. A.; Streltsov, V.; Soldatov, A. V.

    2013-04-01

    This article is dedicated to the local atomic structure analysis of the copper binding site in amyloid-β peptide. Here we considered two possible structural models that were previously obtained by means of EXAFS analysis and density functional theory simulations. We present the calculations of Cu K-edge XANES spectra for both models and make comparison of these spectra with experiment.

  2. Sulfate formation on SOx trapping materials studied by Cu and S K-edge XAFS.

    PubMed

    Dathe, Hendrik; Jentys, Andreas; Lercher, Johannes A

    2005-03-21

    The elementary steps during oxidative chemisorption of SO2 by a novel composite material consisting of highly disordered benzene tri-carboxylate metal organic framework materials with Cu as central cation and BaCl2 as a second component (Ba/Cu-BTC) and by a conventional BaCO3/Al2O3/Pt based material were investigated. EXAFS analysis on the Cu K-edge in Ba/Cu-BTC indicates the opening of the majority of the Cu-Cu pairs present in the parent Cu-BTC. Compared to Cu-BTC, the BaCl2 loaded material has hardly any micropores and has higher disorder, but it has better accessibility of the Cu2+ cations. This results from the partial destruction of the MOF structure by reaction between BaCl2 and the Cu cations. The SO2 uptake in oxidative atmosphere was higher for the Ba/Cu-BTC sample than for the BaCO3/Al2O3/Pt based material. XRD showed that on Ba/Cu-BTC the formation of BaSO4 and CuSO4 occurs in parallel to the destruction of the crystalline structure. With BaCO3/Al2O3/Pt the disappearance of carbonates was accompanied with the formation of Ba- and Al-sulfates. XANES at the S K-edge was used to determine the oxidation states of sulfur and to differentiate between the sulfate species formed. At low temperatures (473 K) BaSO4 was formed preferentially (53 mol% BaSO4, 47 mol% CuSO4), while at higher temperatures (and higher sulfate loading) CuSO4 was the most abundant species (42 mol% BaSO4, 58 mol% CuSO4). In contrast, on the BaCO3/Al2O3/Pt based material the relative concentration of the sulfate species (i.e., BaSO4 and Al2(SO4)3) as function of the temperature remained constant. PMID:19791346

  3. Multiple Scattering Approach to Polarization Dependence of F K-Edge XANES Spectra for Highly Oriented Polytetrafluoroethylene (PTFE) Thin Film

    SciTech Connect

    Nagamatsu, S.; Ono, M.; Kera, S.; Okudaira, K. K.; Fujikawa, T.; Ueno, N.

    2007-02-02

    The polarization dependence of F K-edge X-ray absorption near edge structure (XANES) spectra of highly-oriented thin-film of polytetrafluoroethylene (PTFE) has been analyzed by using multiple scattering theory. The spectra show clear polarization dependence due to the highly-oriented structure. The multiple scattering calculations reflects a local structure around an absorbing atom. The calculated results obtained by considering intermolecular-interactions are in good agreement with the observed polarization-dependence. We have also analyzed structural models of the radiation damaged PTFE films.

  4. Resonant inelastic X-ray scattering spectrometer with 25meV resolution at the Cu K -edge

    DOE PAGESBeta

    Ketenoglu, Didem; Harder, Manuel; Klementiev, Konstantin; Upton, Mary; Taherkhani, Mehran; Spiwek, Manfred; Dill, Frank-Uwe; Wille, Hans-Christian; Yavaş, Hasan

    2015-06-27

    An unparalleled resolution is reported with an inelastic X-ray scattering instrument at the CuK-edge. Based on a segmented concave analyzer, featuring single-crystal quartz (SiO2) pixels, the spectrometer delivers a resolution near 25meV (FWHM) at 8981eV. Besides the quartz analyzer, the performance of the spectrometer relies on a four-bounce Si(553) high-resolution monochromator and focusing Kirkpatrick–Baez optics. The measured resolution agrees with the ray-tracing simulation of an ideal spectrometer. The performance of the spectrometer is demonstrated by reproducing the phonon dispersion curve of a beryllium single-crystal.

  5. Ab initio x-ray absorption study of copper K-edge XANES spectra in Cu(II) compounds

    SciTech Connect

    Chaboy, Jesus; Munoz-Paez, Adela; Carrera, Flora; Merkling, Patrick; Marcos, Enrique Sanchez

    2005-04-01

    This work reports a theoretical study of the x-ray absorption near-edge structure spectra at the Cu K edge in several Cu(II) complexes with N-coordinating ligands showing a square-planar arrangement around metal cation. It is shown that single-channel multiple-scattering calculations are not able to reproduce the experimental spectra. The comparison between experimental data and ab initio computations indicates the need of including the contribution of two electronic configurations (3d{sup 9} and 3d{sup 10}L) to account for a proper description of the final state during the photoabsorption process. The best agreement between theory and experiment is obtained by considering a relative weight of 68% and 32% for the two absorption channels 3d{sup 10}L and 3d{sup 9}, respectively.

  6. Resonant inelastic X-ray scattering spectrometer with 25 meV resolution at the Cu K-edge

    PubMed Central

    Ketenoglu, Didem; Harder, Manuel; Klementiev, Konstantin; Upton, Mary; Taherkhani, Mehran; Spiwek, Manfred; Dill, Frank-Uwe; Wille, Hans-Christian; Yavaş, Hasan

    2015-01-01

    An unparalleled resolution is reported with an inelastic X-ray scattering instrument at the Cu K-edge. Based on a segmented concave analyzer, featuring single-crystal quartz (SiO2) pixels, the spectrometer delivers a resolution near 25 meV (FWHM) at 8981 eV. Besides the quartz analyzer, the performance of the spectrometer relies on a four-bounce Si(553) high-resolution monochromator and focusing Kirkpatrick–Baez optics. The measured resolution agrees with the ray-tracing simulation of an ideal spectrometer. The performance of the spectrometer is demonstrated by reproducing the phonon dispersion curve of a beryllium single-crystal. PMID:26134800

  7. Resonant inelastic X-ray scattering spectrometer with 25 meV resolution at the Cu K-edge.

    PubMed

    Ketenoglu, Didem; Harder, Manuel; Klementiev, Konstantin; Upton, Mary; Taherkhani, Mehran; Spiwek, Manfred; Dill, Frank Uwe; Wille, Hans Christian; Yavaş, Hasan

    2015-07-01

    An unparalleled resolution is reported with an inelastic X-ray scattering instrument at the Cu K-edge. Based on a segmented concave analyzer, featuring single-crystal quartz (SiO₂) pixels, the spectrometer delivers a resolution near 25 meV (FWHM) at 8981 eV. Besides the quartz analyzer, the performance of the spectrometer relies on a four-bounce Si(553) high-resolution monochromator and focusing Kirkpatrick-Baez optics. The measured resolution agrees with the ray-tracing simulation of an ideal spectrometer. The performance of the spectrometer is demonstrated by reproducing the phonon dispersion curve of a beryllium single-crystal. PMID:26134800

  8. Polarized XAFS study of Al K-edge for m-plane AlGaN films

    NASA Astrophysics Data System (ADS)

    Miyanaga, T.; Azuhata, T.; Nakajima, K.; Nagoya, H.; Hazu, K.; Chichibu, S. F.

    2014-04-01

    Local structures around Al atoms in high-quality m-plane AlxGa1-xN films (x=0.32 and 0.58) deposited on m-plane GaN substrates by the NH3 source molecular beam epitaxy method were investigated by Al K-edge X-ray absorption fine structure (XAFS) for the first time. XAFS spectra were measured using a linearly-polarized X-ray source from synchrotron radiation for three different directions; along the c-, a-, and m-axes. The interatomic distances along the a-axis are close to Ga-Ga distance in GaN, indicating that the local structures are strongly affected by GaN substrates. The localization of Al atoms was observed for the Al0.32Ga0.68N film.

  9. Unraveling the nature of charge excitations in La2CuO4 with momentum-resolved Cu K-edge resonant inelastic X-ray scattering

    SciTech Connect

    Chen, Cheng-Chien

    2011-03-01

    Results of model calculations using exact diagonalization reveal the orbital character of states associated with different Raman loss peaks in Cu K-edge resonant inelastic X-ray scattering (RIXS) from La{sub 2}CuO{sub 4}. The model includes electronic orbitals necessary to highlight non-local Zhang-Rice singlet, charge transfer and d-d excitations, as well as states with apical oxygen 2p{sub z} character. The dispersion of these excitations is discussed with prospects for resonant final state wave-function mapping. A good agreement with experiments emphasizes the substantial multi-orbital character of RIXS profiles in the energy transfer range 1-6 eV.

  10. Resonant inelastic x-ray scattering study at the oxygen K-edge of corner-shared Sr2CuO3 cuprate

    NASA Astrophysics Data System (ADS)

    Kumar, Umesh; Schlappa, Justine; Zhou, Kejin; Singh, Surjeet; Strocov, Vladimir; Revcolevschi, Alexandre; Rønnow, Henrik; Johnston, Steven; Schmitt, Thorsten

    We present a resonant inelastic x-ray scattering (RIXS) study at the oxygen K-edge of the spin-chain system Sr2CuO3. We investigate this system using small cluster exact diagonalization calculations for a microscopic model that considers all the orbitals of Cu and O in CuO3-unit cell. Using a canonical parameter set, we compute the XAS and RIXS spectra in comparison to the experiment. This allows us to identify the dd- and charge transfer excitations in the observed spectrum. We also infer the presence of several low energy excitations that may be related to phononic and/or magnetic excitations.

  11. An in situ Al K-edge XAS investigation of the local environment of H+- and Cu+-exchanged USY and ZSM-5 zeolites.

    PubMed

    Drake, Ian J; Zhang, Yihua; Gilles, Mary K; Teris Liu, C N; Nachimuthu, Ponnusamy; Perera, Rupert C C; Wakita, Hisanobu; Bell, Alexis T

    2006-06-22

    Aluminum coordination in the framework of USY and ZSM-5 zeolites containing charge-compensating cations (NH4+, H+, or Cu+) was investigated by Al K-edge EXAFS and XANES. This work was performed using a newly developed in-situ cell designed especially for acquiring soft X-ray absorption data. Both tetrahedrally and octahedrally coordinated Al were observed for hydrated H-USY and H-ZSM-5, in good agreement with 27Al NMR analyses. Upon dehydration, water desorbed from the zeolite, and octahedrally coordinated Al was converted progressively to tetrahedrally coordinated Al. These observations confirmed the hypothesis that the interaction of water with Brønsted acid protons can lead to octahedral coordination of Al without loss of Al from the zeolite lattice. When H+ is replaced with NH4+ or Cu+, charge compensating species that absorb less water, less octahedrally coordinated Al was observed. Analysis of Al K-edge EXAFS data indicates that the Al-O bond distance for tetrahedrally coordinated Al in dehydrated USY and ZSM-5 is 1.67 angstroms. Simulation of k3chi(k) for Cu+ exchanged ZSM-5 leads to an estimated distance between Cu+ and framework Al atoms of 2.79 angstroms. PMID:16800461

  12. Polarization dependence of charge-transfer excitations in La2CuO4

    NASA Astrophysics Data System (ADS)

    Lu, Li; Chabot-Couture, Guillaume; Hancock, Jason; Vajk, Owen; Yu, Guichuan; Ishii, Kenji; Mizuki, Jun'ichiro; Casa, Diego; Gog, Thomas; Greven, Martin

    2006-03-01

    We have carried out an extensive resonant inelastic x-ray scattering (RIXS) study of La2CuO4 at the Cu K-edge. Multiple charge-transfer excitations have been identified using the incident photon energy dependence of the cross section and studied carefully with polarizations E//c and E //ab. An analysis of the incident photon energy dependence, the polarization dependence, as well as the K-edge absorption spectra, indicates that the RIXS spectra reveal rich physics about the K-edge absorption process and momentum-dependent charge-transfer excitations in cuprates.

  13. K-edge x-ray dichroism investigation of Fe1-xCoxSi: Experimental evidence for spin polarization crossover

    NASA Astrophysics Data System (ADS)

    Hearne, G. R.; Diguet, G.; Baudelet, F.; Itié, J.-P.; Manyala, N.

    2015-04-01

    Both Fe and Co K-edge x-ray magnetic circular dichroism (XMCD) have been employed as element-specific probes of the magnetic moments in the composition series of the disordered ferromagnet Fe1-xCoxSi (for x=0.2, 0.3, 0.4, 0.5). A definitive single peaked XMCD profile occurs for all compositions at both Fe and Co K-edges. The Fe 4p orbital moment, deduced from the integral of the XMCD signal, has a steep dependence on x at low doping levels and evolves to a different (weaker) dependence at x≥0.3, similar to the behavior of the magnetization in the Co composition range studied here. It is systematically higher, by at least a factor of two, than the corresponding Co orbital moment for most of the composition series. Fine structure beyond the K-edge absorption (limited range EXAFS) suggests that the local order (atomic environment) is very similar across the series, from the perspective of both the Fe and Co absorbing atom. The variation in the XMCD integral across the Co composition range has two regimes, that which occurs below x=0.3 and then evolves to different behavior at higher doping levels. This is more conspicuously present in the Fe contribution. This is rationalized as the evolution from a half-metallic ferromagnet at low Co doping to that of a strong ferromagnet at x>0.3 and as such, spin polarization crossover occurs. The Fermi level is tuned from the majority spin band for x<0.3 where a strongly polarized majority spin electron gas prevails, to a regime where minority spin carriers dominate at higher doping. The evolution of the Fe-derived spin polarized (3d) bands, indirectly probed here via the 4p states, is the primary determinant of the doping dependence of the magnetism in this alloy series.

  14. Cu K-edge X-ray Absorption Spectroscopy Reveals Differential Copper Coordimation Within Amyloid-beta Oligomers Compared to Amyloid-beta Monomers

    SciTech Connect

    J Shearer; P Callan; T Tran; V Szalai

    2011-12-31

    The fatal neurodegenerative disorder Alzheimer's disease (AD) has been linked to the formation of soluble neurotoxic oligomers of amyloid-{beta} (A{beta}) peptides. These peptides have high affinities for copper cations. Despite their potential importance in AD neurodegeneration few studies have focused on probing the Cu{sup 2+/1+} coordination environment within A{beta} oligomers. Herein we present a Cu K-edge X-ray absorption spectroscopic study probing the copper-coordination environment within oligomers of A{beta}(42) (sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA). We find that the Cu{sup 2+} cation is contained within a square planar mixed N/O ligand environment within A{beta}(42) oligomers, which is similar to the copper coordination environment of the monomeric forms of {l_brace}Cu{sup II}A{beta}(40){r_brace} and {l_brace}Cu{sup II}A{beta}(16){r_brace}. Reduction of the Cu{sup 2+} cation within the A{beta}(42) oligomers to Cu{sup 1+} yields a highly dioxygen sensitive copper-species that contains Cu{sup 1+} in a tetrahedral coordination geometry. This can be contrasted with monomers of {l_brace}Cu{sup I}A{beta}(40){r_brace} and {l_brace}Cu{sup I}A{beta}(16){r_brace}, which contain copper in a dioxygen inert linear bis-histidine ligand environment [Shearer and Szalai, J. Am. Chem. Soc., 2008, 130, 17826]. The biological implications of these findings are discussed.

  15. Element-resolved orbital polarization in (III,Mn)As ferromagnetic semiconductors from K -edge x-ray magnetic circular dichroism

    NASA Astrophysics Data System (ADS)

    Wadley, P.; Freeman, A. A.; Edmonds, K. W.; van der Laan, G.; Chauhan, J. S.; Campion, R. P.; Rushforth, A. W.; Gallagher, B. L.; Foxon, C. T.; Wilhelm, F.; Smekhova, A. G.; Rogalev, A.

    2010-06-01

    Using x-ray magnetic circular dichroism (XMCD), we determine the element-specific character and polarization of unoccupied states near the Fermi level in (Ga,Mn)As and (In,Ga,Mn)As thin films. The XMCD at the AsK absorption edge consists of a single peak located on the low-energy side of the edge, which increases with the concentration of ferromagnetic Mn moments. The XMCD at the MnK edge is more detailed and is strongly concentration dependent, which is interpreted as a signature of hole localization for low Mn doping. The results indicate a markedly different character of the polarized holes in low-doped insulating and high-doped metallic films, with a transfer of the hole orbital magnetic moment from Mn to As sites on crossing the metal-insulator transition.

  16. K-edge magnetic circular dichroism of O in CO/Ni/Cu(001): Dependence on substrate magnetic anisotropy and its interpretation

    NASA Astrophysics Data System (ADS)

    Yokoyama, Toshihiko; Amemiya, Kenta; Miyachi, Mariko; Yonamoto, Yoshiki; Matsumura, Daiju; Ohta, Toshiaki

    2000-12-01

    O K-edge x-ray magnetic circular dichroism (XMCD) was investigated for molecular CO adsorbed on Ni thin films grown epitaxially on Cu(001). In the case of 10 monolayer (ML) Ni that shows perpendicular magnetic anisotropy (PMA), a relatively strong negative XMCD signal was observed at the O 1s-->CO 2π* transition. Since the CO 2π* orbital is partially filled due to hybridization of Ni 3d levels, this finding implies parallel alignment of the CO 2π* orbital moment with substrate Ni magnetization. The orbital moment is ascribed to the molecular orbital origin that is derived from degeneracy of the two π* orbitals. On the contrary, in the cases of in-plane magnetization of 6 ML and thick (>100 ML) Ni films, the XMCD signal at the CO 2π* resonance was found to be weak and positive. Although the origin of the orbital moment is not yet clear in the in-plane magnetization case, this indicates that the orbital moment shows antiparallel alignment with Ni. The direction of the CO 2π* orbital moment in PMA is interpreted with a framework of chemical bonding between CO and Ni.

  17. Distribution and oxidation state of Ge, Cu and Fe in sphalerite by μ-XRF and K-edge μ-XANES: insights into Ge incorporation, partitioning and isotopic fractionation

    NASA Astrophysics Data System (ADS)

    Belissont, Rémi; Muñoz, Manuel; Boiron, Marie-Christine; Luais, Béatrice; Mathon, Olivier

    2016-03-01

    Synchrotron-based microscale X-ray absorption near edge structure spectroscopy (μ-XANES) has been combined with X-ray fluorescence (μ-XRF) mapping to investigate Ge, Cu and Fe oxidation states in compositionally zoned Ge-rich sphalerite from the Saint-Salvy deposit (France). The present study aims at improving our understanding of substitution mechanisms and trace element uptake relative to Ge isotope fractionation in sphalerite. K-Edge XANES records of various Ge-, Cu- and Fe-bearing sulphides are presented for comparison with sphalerite, and ab initio calculations at the Ge K-edge complete our experimental data. The Ge K-edge spectra of the Ge-bearing sphalerite are identical to those of germanite, renierite and briartite, indicating the presence of tetrahedrally-coordinated Ge4+. In addition, Cu and Fe K-edge spectra suggest the presence of Cu+ and Fe2+, respectively, in the tetrahedral site. No significant differences in the oxidation states of Ge, Cu and Fe were observed within or between the zoning types or between the samples. The intake of Ge4+ in sphalerite may therefore occur in the tetrahedral divalent metal site via coupled substitutions charge-balanced by monovalent elements such as 3Zn2+ ↔ Ge4+ + 2Cu+, resulting in a strong Ge-Cu elemental correlation, or, when Ge does not correlate with monovalent elements, through the creation of lattice vacancies such as 2Zn2+ ↔ Ge4+ + □ (vacancy). The tetravalent state of Ge is compatible with temperature-related Ge isotopic fractionation and can explain the large range of δ74Ge measured in the Saint-Salvy sphalerite. Moreover, the exceptional enrichment in Ge and the large variations in the 'bulk' Ge contents in these sphalerites do not appear to be related to charge effects but would instead result from the effect of temperature-related partitioning.

  18. O K-edge x-ray magnetic circular dichroism of atomic O adsorbed on an ultrathin Co/Cu(100) film: Comparison with molecular CO on Co/Cu(100)

    NASA Astrophysics Data System (ADS)

    Amemiya, Kenta; Yokoyama, Toshihiko; Yonamoto, Yoshiki; Matsumura, Daiju; Ohta, Toshiaki

    2001-10-01

    We observed O K-edge x-ray magnetic circular dichroism (XMCD) of atomic O adsorbed on a fcc Co thin film grown epitaxially on Cu(100). The XMCD of c(2×2)O showed a negative sign at the O1s-->2p transition. The negative sign indicates parallel alignment of the O orbital moment with the substrate magnetization. This finding is in contrast to the CO/Co/Cu(100) case where a positive XMCD was observed at the O1s-->CO2π* transition. A possible explanation for this discrepancy is proposed referring to recent theoretical prediction [Pick et al., Phys. Rev. B 59, 4195 (1999)].

  19. Polarized X-ray absorption fine structure of La 2CuO 4-y single crystal

    NASA Astrophysics Data System (ADS)

    Oyanagi, Hiroyuki; Oka, Kunihiko; Unoki, Hiromi; Nishihara, Yoshikazu; Murata, Keizo; Matsushita, Tadashi; Tokumoto, Madoka; Kimura, Yoichi

    1989-06-01

    Polarized X-ray absorption fine structure (XAFS) has been measured on the Cu K-edge for undoped La2CuO4-y bulk single crystal (15 × 20 × 3 mm) grown by the top-seeded solution growth method. Strong polarization dependence observed in the near-edge and EXAFS regions demonstrates the quasi-2D character of the CuO2 plane in terms of both electron states and local structure.

  20. K-edge densitometer (KED)

    SciTech Connect

    Sprinkle, J.K.; Hansen, W.J.

    1993-02-11

    In 1979, a K-edge densitometer (KED) was installed by the Safeguards Assay group from Los Alamos National Laboratory in the PNC reprocessing plant at Tokai-mura, Japan. It uses an active nondestructive assay technique, KED, to measure the plutonium concentration of the product solution. The measurement uncertainty of an assay depends on the count time chosen, but can be 0.5% or better. The computer hardware and software were upgraded in 1992. This manual describes the operation of the instrument, with an emphasis on the user interface to the software.

  1. Many-electron effects in anomalous elastic scattering of linearly polarized x-ray photons by Xe near the K-edge

    NASA Astrophysics Data System (ADS)

    Hopersky, A. N.; Yavna, V. A.; Popov, V. A.

    1997-11-01

    Within the non-relativistic approximation the effect of radial monopole rearrangement of electron shells within the field of a vacancy and of the processes of one-photon double excitation - ionization on the differential cross section of anomalous non-zero-angle elastic scattering of linearly polarized x-ray photons by the Xe atom in the region of its 1s-shell ionization threshold is studied. Theoretical results for the anomalous dispersion region of scattering demonstrate a strong dependence of the cross section value on the approximation used.

  2. Compact K-edge densitometer

    SciTech Connect

    Cowder, L.R.; Klosterbuer, S.F.; Augustson, R.H.; Esmailpour, A.; Hawkins, R.; Kuhn, E.

    1984-05-01

    Los Alamos National Laboratory has designed, built, and is currently testing a compact K-edge densitometer for use by International Atomic Energy Agency (IAEA) inspectors. The unit, which can easily be moved from one location to another within a facility, is positioned outside a glovebox with the body of the instrument inserted into the glove. A fixture inside the glovebox fits around the body and positions a sample holder. A hand-held high-purity germanium detector powered by a battery pack and a Davidson portable multichannel analyzer (MCA) is used to measure the transmission through plutonium nitrate solutions at E/sub Y/ = 121.1 and 122.2 keV. The Davidson MCA is programmed to lead the user through the measurement procedure and perform all the data analyses. The instrument is currently installed at the Safeguards Analytical Laboratory, where IAEA personnel are evaluating its accuracy, ease of operation, and safety. 5 references, 5 figures, 5 tables.

  3. Full-Field Calcium K-Edge X-ray Absorption Near-Edge Structure Spectroscopy on Cortical Bone at the Micron-Scale: Polarization Effects Reveal Mineral Orientation.

    PubMed

    Hesse, Bernhard; Salome, Murielle; Castillo-Michel, Hiram; Cotte, Marine; Fayard, Barbara; Sahle, Christoph J; De Nolf, Wout; Hradilova, Jana; Masic, Admir; Kanngießer, Birgit; Bohner, Marc; Varga, Peter; Raum, Kay; Schrof, Susanne

    2016-04-01

    Here, we show results on X-ray absorption near edge structure spectroscopy in both transmission and X-ray fluorescence full-field mode (FF-XANES) at the calcium K-edge on human bone tissue in healthy and diseased conditions and for different tissue maturation stages. We observe that the dominating spectral differences originating from different tissue regions, which are well pronounced in the white line and postedge structures are associated with polarization effects. These polarization effects dominate the spectral variance and must be well understood and modeled before analyzing the very subtle spectral variations related to the bone tissue variations itself. However, these modulations in the fine structure of the spectra can potentially be of high interest to quantify orientations of the apatite crystals in highly structured tissue matrices such as bone. Due to the extremely short wavelengths of X-rays, FF-XANES overcomes the limited spatial resolution of other optical and spectroscopic techniques exploiting visible light. Since the field of view in FF-XANES is rather large the acquisition times for analyzing the same region are short compared to, for example, X-ray diffraction techniques. Our results on the angular absorption dependence were verified by both site-matched polarized Raman spectroscopy, which has been shown to be sensitive to the orientation of bone building blocks and by mathematical simulations of the angular absorbance dependence. As an outlook we further demonstrate the polarization based assessment of calcium-containing crystal orientation and specification of calcium in a beta-tricalcium phosphate (β-Ca3(PO4)2 scaffold implanted into ovine bone. Regarding the use of XANES to assess chemical properties of Ca in human bone tissue our data suggest that neither the anatomical site (tibia vs jaw) nor pathology (healthy vs necrotic jaw bone tissue) affected the averaged spectral shape of the XANES spectra. PMID:26959687

  4. Magnetic Nature of the 500 meV peak in La2−xSrxCuO4 Observed with Resonant Inelastic X-ray Scattering at the Cu K-edge

    SciTech Connect

    Hill, J.P.; Ellis, D.S.; Kim, J.; Wakimoto, S.; Birgeneau, R.J.; Shvyd’ko, Y.; Casa, D.; Gog, T.; Ishii, K.; Ikeuchi, K.; Paramekanti, A.; Kim, Y.-J.

    2010-02-15

    We present a comprehensive study of the temperature and doping dependence of the 500 meV peak observed at q = ({pi},0) in resonant inelastic x-ray scattering (RIXS) experiments on La{sub 2}CuO{sub 4}. The intensity of this peak persists above the Neel temperature (T{sub N} = 320 K), but decreases gradually with increasing temperature, reaching zero at around T = 500 K. The peak energy decreases with temperature in close quantitative accord with the behavior of the two-magnon B{sub 1g} Raman peak in La{sub 2}CuO{sub 4} and, with suitable rescaling, agrees with the Raman peak shifts in EuBa{sub 2}Cu{sub 3}O{sub 6} and K{sub 2}NiF{sub 4}. The overall dispersion of this excitation in the Brillouin zone is found to be in agreement with theoretical calculations for a two-magnon excitation. Upon doping, the peak intensity decreases analogous to the Raman mode intensity and appears to track the doping dependence of the spin-correlation length. Taken together, these observations strongly suggest that the 500 meV mode is magnetic in character and is likely a two-magnon excitation.

  5. Incident energy and polarization-dependent resonant inelastic x-ray scattering study of La2CuO4

    NASA Astrophysics Data System (ADS)

    Lu, L.; Hancock, J. N.; Chabot-Couture, G.; Ishii, K.; Vajk, O. P.; Yu, G.; Mizuki, J.; Casa, D.; Gog, T.; Greven, M.

    2006-12-01

    We present a detailed Cu K -edge resonant inelastic x-ray scattering (RIXS) study of the Mott insulator La2CuO4 in the 1-7eV energy loss range. As initially found for the high-temperature superconductor HgBa2CuO4+δ , the spectra exhibit a multiplet of weakly dispersive electron-hole excitations, which are revealed by utilizing the subtle dependence of the cross section on the incident photon energy. The close similarity between the fine structures for in-plane and out-of-plane polarizations is indicative of the central role played by the 1s core hole in inducing charge excitations within the CuO2 planes. On the other hand, we observe a polarization dependence of the spectral weight, and careful analysis reveals two separate features near 2eV that may be related to different charge-transfer processes. The polarization dependence indicates that the 4p electrons contribute significantly to the RIXS cross section. Third-order perturbation arguments and a shake-up of valence excitations are then applied to account for the final-energy resonance in the spectra. As an alternative scenario, we discuss fluorescence-like emission processes due to 1s→4p transitions into a narrow continuum 4p band.

  6. On the Structure of the Iron K-Edge

    NASA Technical Reports Server (NTRS)

    Palmeri, P.; Mendoza, C.; Kallman, T. R.; Bautista, M. A.; White, Nicholas E. (Technical Monitor)

    2002-01-01

    It is shown that the commonly held view of a sharp Fe K edge must be modified if the decay pathways of the series of resonances converging to the K thresholds are adequately taken into account. These resonances display damped Lorentzian profiles of nearly constant widths that are smeared to impose continuity across the threshold. By modeling the effects of K damping on opacities, it is found that the broadening of the K edge grows with the ionization level of the plasma, and the appearance at high ionization of a localized absorption feature at 7.2 keV is identified as the Kbeta unresolved transition array.

  7. Si K Edge Measurements of the ISM with Chandra

    NASA Astrophysics Data System (ADS)

    Schulz, Norbert S.; Corrales, Lia; Canizares, C. R.

    2016-01-01

    The Si K edge structure in X-ray spectra of the diffuse ISM is expected to exhibit substructure related to the fact that most absorption is due to silicates in dust. We surveyed high resolution X-ray spectra of a large number of bright low-mass X-ray binaries with column densities significantly larger than 10^22 cm^2. Using the to date unprecedented spectral resolution of the high energy transmission gratings onboard the Chandra X-ray observatory we find complex substructure in the Si K edge. The highest resolved spectra show two edges, one at the expected value for atomic, one at the value for most silicate compounds with the dominant contribution of the latter. There is specific subtructure from silicate optical depth caused by absorption and scattering. Some is also variable and can be attributed to ionized absorption in the vicinity of the X-ray sources.

  8. Spectral CT using multiple balanced K-edge filters.

    PubMed

    Rakvongthai, Yothin; Worstell, William; El Fakhri, Georges; Bian, Junguo; Lorsakul, Auranuch; Ouyang, Jinsong

    2015-03-01

    Our goal is to validate a spectral computed tomography (CT) system design that uses a conventional X-ray source with multiple balanced K-edge filters. By performing a simultaneously synthetic reconstruction in multiple energy bins, we obtained a good agreement between measurements and model expectations for a reasonably complex phantom. We performed simulation and data acquisition on a phantom containing multiple rods of different materials using a NeuroLogica CT scanner. Five balanced K-edge filters including Molybdenum, Cerium, Dysprosium, Erbium, and Tungsten were used separately proximal to the X-ray tube. For each sinogram bin, measured filtered vector can be defined as a product of a transmission matrix, which is determined by the filters and is independent of the imaging object, and energy-binned intensity vector. The energy-binned sinograms were then obtained by inverting the transmission matrix followed by a multiplication of the filter measurement vector. For each energy bin defined by two consecutive K-edges, a synthesized energy-binned attenuation image was obtained using filtered back-projection reconstruction. The reconstructed attenuation coefficients for each rod obtained from the experiment was in good agreement with the corresponding simulated results. Furthermore, the reconstructed attenuation coefficients for a given energy bin, agreed with National Institute of Standards and Technology reference values when beam hardening within the energy bin is small. The proposed cost-effective system design using multiple balanced K-edge filters can be used to perform spectral CT imaging at clinically relevant flux rates using conventional detectors and integrating electronics. PMID:25252276

  9. Spectral CT Using Multiple Balanced K-Edge Filters

    PubMed Central

    Rakvongthai, Yothin; Worstell, William; Fakhri, Georges El; Bian, Junguo; Lorsakul, Auranuch; Ouyang, Jinsong

    2015-01-01

    Our goal is to validate a spectral CT system design that uses a conventional X-ray source with multiple balanced K-edge filters. By performing a simultaneously synthetic reconstruction in multiple energy bins, we obtained a good agreement between measurements and model expectations for a reasonably complex phantom. We performed simulation and data acquisition on a phantom containing multiple rods of different materials using a NeuroLogica CT scanner. Five balanced K-edge filters including Molybdenum, Cerium, Dysprosium, Erbium, and Tungsten were used separately proximal to the X-ray tube. For each sinogram bin, measured filtered vector can be defined as a product of a transmission matrix, which is determined by the filters and is independent of the imaging object, and energy-binned intensity vector. The energy-binned sinograms were then obtained by inverting the transmission matrix followed by a multiplication of the filter measurement vector. For each energy bin defined by two consecutive K-edges, a synthesized energy-binned attenuation image was obtained using filtered back-projection reconstruction. The reconstructed attenuation coefficients for each rod obtained from the experiment was in good agreement with the corresponding simulated results. Furthermore, the reconstructed attenuation coefficients for a given energy bin, agreed with National Institute of Standards and Technology reference values when beam hardening within the energy bin is small. The proposed cost-effective system design using multiple balanced K-edge filters can be used to perform spectral CT imaging at clinically relevant flux rates using conventional detectors and integrating electronics. PMID:25252276

  10. Aluminium K-Edge XANES Study of Mica Preiswerkite

    SciTech Connect

    Wu, Z.; Marcelli, A.; Cibin, G.; Mottana, A.; Della Ventura, G.; /SLAC, SSRl

    2006-10-27

    We present the Al K-edge XANES spectrum of synthetic mica with mixed fourfold coordinated and sixfold coordinated Al (preiswerkite). Experimental analysis and multiple scattering simulations of XANES spectra demonstrate that octahedral contributions may overlap the tetrahedral ones so that the lower energy structures in mixed coordination compounds may be associated to Al octahedral site. This unexpected behavior can be explained as due to a large local distortion of the Al octahedral site.

  11. Measurement of an inverse Compton scattering source local spectrum using k-edge filters

    SciTech Connect

    Golosio, Bruno; Oliva, Piernicola; Carpinelli, Massimo; Endrizzi, Marco; Delogu, Pasquale; Pogorelsky, Igor; Yakimenko, Vitaly

    2012-04-16

    X-ray sources based on the inverse Compton scattering process are attracting a growing interest among scientists, due to their extremely fast pulse, quasi-monochromatic spectrum, and relatively high intensity. The energy spectrum of the x-ray beam produced by inverse Compton scattering sources in a fixed observation direction is a quasi-monochromatic approximately Gaussian distribution. The mean value of this distribution varies with the scattering polar angle between the electron beam direction and the x-ray beam observation direction. Previous works reported experimental measurements of the mean energy as a function of the polar angle. This work introduces a method for the measurement of the whole local energy spectrum (i.e., the spectrum in a fixed observation direction) of the x-ray beam yielded by inverse Compton scattering sources, based on a k-edge filtering technique.

  12. Zn-K edge EXAFS study of human nails

    NASA Astrophysics Data System (ADS)

    Katsikini, M.; Mavromati, E.; Pinakidou, F.; Paloura, E. C.; Gioulekas, D.

    2009-11-01

    Extended X-ray absorption fine structure (EXAFS) spectroscopy at the Zn - K edge is applied for the study of the bonding geometry of Zn in human nails. The studied nail clippings belong to healthy donors and donors who suffer from lung diseases. Fitting of the first nearest neighboring shell of Zn reveals that it is bonded with N and S, at distances that take values in the ranges 2.00-2.04 Å and 2.23-2.28Å, respectively. Zn is four - fold coordinated and the ratio of the number of sulfur and nitrogen atoms (NS/NN) in the first coordination shell ranges from 0.52 to 1. The sample that belongs to the donor who suffers from lung fibrosis, a condition that is related to keratinization of the lung tissue, is characterized by the highest number of NS/NN. Simulation, using the FEFF8 code, of the Zn - K edge EXAFS spectra with models of tetrahedrally coordinated Zn with 1 (or 2) cysteine and 3 (or 2) histidines is satisfactory.

  13. K-Edge Subtraction Angiography with Synchrotron X-Rays

    SciTech Connect

    Giacomini, John C.

    1996-12-31

    The purpose of this project was to utilize dual energy, monochromatic X-rays produced from synchrotrons radiation in order to obtain noninvasive medical imaging. The application of synchrotrons radiation to medical imaging is based on the principle of iodine dichromography, first described by Bertil Jacobson of the Karolinska Institute in 1953. Medical imaging using synchrotrons radiation and K-edge dichromography was pioneered at Stanford University under the leadership of Dr. Ed Rubenstein, and the late Nobel Laureate in Physics, Dr. Robert Hofstadter. With progressive refinements in hardware, clinical-quality images were obtained of human coronary arteries utilizing peripheral injections of iodinated contrast agent. These images even now are far superior to those being presented by investigators using MRI as an imaging tool for coronary arteries. However, new supplies and instruments in the cardiac catheterization laboratory have served to transform coronary angiography into an outpatient procedure, with relatively little morbidity. We extended the principles learned with coronary angiography to noninvasive imaging of the human bronchial tree. For these images, we utilized xenon as the contrast agent, as it has a K-edge very similar to that of iodine. In this case, there is no true competing diagnostic test, and pulmonary neoplasm is an enormous public health concern. In early experiments, we demonstrated remarkably clear images of the human bronchial tree. These images have been shown internationally; however, funding difficulties primarily with the Department of Energy have not allowed for progression of this promising avenue of research. One potential criticism of the project is that in order to obtain these images, we utilized national laboratories. Some have questioned whether this would lead to a practical imaging modality. However, we have shown that the technology exists to allow for construction of a miniature storage ring, with a superconducting

  14. Local environment of metal ions in phthalocyanines: K-edge X-ray absorption spectra.

    PubMed

    Rossi, G; d'Acapito, F; Amidani, L; Boscherini, F; Pedio, M

    2016-09-14

    We report a detailed study of the K-edge X-ray absorption spectra of four transition metal phthalocyanines (MPc, M = Fe, Co, Cu and Zn). We identify the important single and multiple scattering contributions to the spectra in the extended energy range and provide a robust treatment of thermal damping; thus, a generally applicable model for the interpretation of X-ray absorption fine structure spectra is proposed. Consistent variations of bond lengths and Debye Waller factors are found as a function of atomic number of the metal ion, indicating a variation of the metal-ligand bond strength which correlates with the spatial arrangement and occupation of molecular orbitals. We also provide an interpretation of the near edge spectral features in the framework of a full potential real space multiple scattering approach and provide a connection to the local electronic structure. PMID:27510989

  15. Portable X-Ray, K-Edge Heavy Metal Detector

    SciTech Connect

    Fricke, V.

    1999-10-25

    The X-Ray, K-Edge Heavy Metal Detection System was designed and built by Ames Laboratory and the Center for Nondestructive Evaluation at Iowa State University. The system uses a C-frame inspection head with an X-ray tube mounted on one side of the frame and an imaging unit and a high purity germanium detector on the other side. the inspection head is portable and can be easily positioned around ventilation ducts and pipes up to 36 inches in diameter. Wide angle and narrow beam X-ray shots are used to identify the type of holdup material and the amount of the contaminant. Precise assay data can be obtained within minutes of the interrogation. A profile of the containerized holdup material and a permanent record of the measurement are immediately available.

  16. X-ray absorption and reflection as probes of the GaN conduction bands: Theory and experiment of the N K-edge and Ga M{sub 2,3} edges

    SciTech Connect

    Lambrecht, W.R.L.; Rashkeev, S.N.; Segall, B.; Lawniczak-Jablonska, K.; Suski, T.; Gullikson, E.M.; Underwood, J.H.; Perera, R.C.C.; Rife, J.C.

    1997-12-31

    X-ray absorption and glancing angle reflectivity measurements in the energy range of the Nitrogen K-edge and Gallium M{sub 2,3} edges are reported. Linear muffin-tin orbital band-structure and spectral function calculations are used to interpret the data. Polarization effects are evidenced for the N-K-edge spectra by comparing X-ray reflectivity in s- and p-polarized light.

  17. Phosphorus K-edge XANES spectroscopy of mineral standards

    PubMed Central

    Ingall, Ellery D.; Brandes, Jay A.; Diaz, Julia M.; de Jonge, Martin D.; Paterson, David; McNulty, Ian; Elliott, W. Crawford; Northrup, Paul

    2011-01-01

    Phosphorus K-edge X-ray absorption near-edge structure (XANES) spectroscopy was performed on phosphate mineral specimens including (a) twelve specimens from the apatite group covering a range of compositional variation and crystallinity; (b) six non-apatite calcium-rich phosphate minerals; (c) 15 aluminium-rich phosphate minerals; (d) ten phosphate minerals rich in either reduced iron or manganese; (e) four phosphate minerals rich in either oxidized iron or manganese; (f) eight phosphate minerals rich in either magnesium, copper, lead, zinc or rare-earth elements; and (g) four uranium phosphate minerals. The identity of all minerals examined in this study was independently confirmed using X-ray powder diffraction. Minerals were distinguished using XANES spectra with a combination of pre-edge features, edge position, peak shapes and post-edge features. Shared spectral features were observed in minerals with compositions dominated by the same specific cation. Analyses of apatite-group minerals indicate that XANES spectral patterns are not strongly affected by variations in composition and crystallinity typical of natural mineral specimens. PMID:21335905

  18. Fragmentation of HCl following excitation at the chlorine K edge

    SciTech Connect

    Hansen, D.L.; Arrasate, M.E.; Cotter, J.P.

    1997-04-01

    A space-focused time-of-flight (TOF) mass spectrometer was used to study the relaxation dynamics of HCl following excitation in the vicinity of the Cl-K edge ({approximately}2.8 keV) using x-rays from B.L. 9.3.1. At the lowest resonant excitation to a {sigma}{sup *} antibonding orbital (1{sigma} {r_arrow} 6{sigma}), a significant fraction of the excited molecules decay by emission of a neutral H atom. While neutral-H emission has been observed for shallow core levels (e.g., Cl 2p in HCl), the authors believe this to be the first observation of neutral-atom emission as a significant decay channel following resonant excitation of a deep core hole. The dissociation of neutral hydrogen atoms raises the issue of how effectively dissociation competes with Auger decay in the relaxation of these deep core levels (i.e., Cl 1s). Graphical evidence is presented to support the dissociation agrument. In addition, trends in fractional ion yields from Photo-Ion Photo-Ion COincidence (PIPICO) spectra suggest the presence of post-collision interaction (PCI). While, electron spectroscopy studies are required to confirm the observation of this effect, the authors believe this to be the first evidence of PCI moderated dissociation in molecules.

  19. Phosphorus K-edge XANES Spectroscopy of Mineral Standards

    SciTech Connect

    E Ingall; J Brandes; J Diaz; M de Jonge; D Paterson; I McNulty; C Elliott; P Northrup

    2011-12-31

    Phosphorus K-edge X-ray absorption near-edge structure (XANES) spectroscopy was performed on phosphate mineral specimens including (a) twelve specimens from the apatite group covering a range of compositional variation and crystallinity; (b) six non-apatite calcium-rich phosphate minerals; (c) 15 aluminium-rich phosphate minerals; (d) ten phosphate minerals rich in either reduced iron or manganese; (e) four phosphate minerals rich in either oxidized iron or manganese; (f) eight phosphate minerals rich in either magnesium, copper, lead, zinc or rare-earth elements; and (g) four uranium phosphate minerals. The identity of all minerals examined in this study was independently confirmed using X-ray powder diffraction. Minerals were distinguished using XANES spectra with a combination of pre-edge features, edge position, peak shapes and post-edge features. Shared spectral features were observed in minerals with compositions dominated by the same specific cation. Analyses of apatite-group minerals indicate that XANES spectral patterns are not strongly affected by variations in composition and crystallinity typical of natural mineral specimens.

  20. Phosphorus K-edge XANES spectroscopy of mineral standards.

    PubMed

    Ingall, Ellery D; Brandes, Jay A; Diaz, Julia M; de Jonge, Martin D; Paterson, David; McNulty, Ian; Elliott, W Crawford; Northrup, Paul

    2011-03-01

    Phosphorus K-edge X-ray absorption near-edge structure (XANES) spectroscopy was performed on phosphate mineral specimens including (a) twelve specimens from the apatite group covering a range of compositional variation and crystallinity; (b) six non-apatite calcium-rich phosphate minerals; (c) 15 aluminium-rich phosphate minerals; (d) ten phosphate minerals rich in either reduced iron or manganese; (e) four phosphate minerals rich in either oxidized iron or manganese; (f) eight phosphate minerals rich in either magnesium, copper, lead, zinc or rare-earth elements; and (g) four uranium phosphate minerals. The identity of all minerals examined in this study was independently confirmed using X-ray powder diffraction. Minerals were distinguished using XANES spectra with a combination of pre-edge features, edge position, peak shapes and post-edge features. Shared spectral features were observed in minerals with compositions dominated by the same specific cation. Analyses of apatite-group minerals indicate that XANES spectral patterns are not strongly affected by variations in composition and crystallinity typical of natural mineral specimens. PMID:21335905

  1. High spin polarization and the origin of unique ferromagnetic ground state in CuFeSb

    NASA Astrophysics Data System (ADS)

    Sirohi, Anshu; Singh, Chandan K.; Thakur, Gohil S.; Saha, Preetha; Gayen, Sirshendu; Gaurav, Abhishek; Jyotsna, Shubhra; Haque, Zeba; Gupta, L. C.; Kabir, Mukul; Ganguli, Ashok K.; Sheet, Goutam

    2016-06-01

    CuFeSb is isostructural to the ferro-pnictide and chalcogenide superconductors and it is one of the few materials in the family that are known to stabilize in a ferromagnetic ground state. Majority of the members of this family are either superconductors or antiferromagnets. Therefore, CuFeSb may be used as an ideal source of spin polarized current in spin-transport devices involving pnictide and the chalcogenide superconductors. However, for that the Fermi surface of CuFeSb needs to be sufficiently spin polarized. In this paper we report direct measurement of transport spin polarization in CuFeSb by spin-resolved Andreev reflection spectroscopy. From a number of measurements using multiple superconducting tips we found that the intrinsic transport spin polarization in CuFeSb is high (˜47%). In order to understand the unique ground state of CuFeSb and the origin of large spin polarization at the Fermi level, we have evaluated the spin-polarized band structure of CuFeSb through first principles calculations. Apart from supporting the observed 47% transport spin polarization, such calculations also indicate that the Sb-Fe-Sb angles and the height of Sb from the Fe plane are strikingly different for CuFeSb than the equivalent parameters in other members of the same family thereby explaining the origin of the unique ground state of CuFeSb.

  2. Co K-edge magnetic circular dichroism across the spin state transition in LaCoO3 single crystal

    NASA Astrophysics Data System (ADS)

    Efimov, V.; Ignatov, A.; Troyanchuk, I. O.; Sikolenko, V. V.; Rogalev, A.; Wilhelm, F.; Efimova, E.; Tiutiunnikov, S. I.; Karpinsky, D.; Kriventsov, V.; Yakimchuk, E.; Molodtsov, S.; Sainctavit, P.; Prabhakaran, D.

    2016-05-01

    We report on Co K-edge x-ray magnetic circular dichroism (XMCD) measurements of LaCoO3 single crystal in temperature range from 5 to 300 K and external magnetic field of 17 T. The response consists of pre-edge (at 7712 eV) and bi-polar peak (up at 7727, down at 7731 eV) with amplitudes, respectively, less than 10-3 and 10-2 of the Co K-edge jump. Using the sum rule the orbital magnetic moment of 4p Co is evaluated. Its temperature dependence reaches a maximum of (2.7 ± 0.9) x10-3 μB at 120 K, following the trend for the total magnetic moment on the Co obtained from the superconducting quantum interference device measurements. However, on warming from 25 to 120 K, the orbital magnetic moment of the 4p Co doubles while total magnetic moment of Co increases 10 times. First principle calculations are in order to relate the Co K-edge XMCD results to the orbital and spin moment of 3d Co.

  3. Sparsity-regularized image reconstruction of decomposed K-edge data in spectral CT

    NASA Astrophysics Data System (ADS)

    Xu, Qiaofeng; Sawatzky, Alex; Anastasio, Mark A.; Schirra, Carsten O.

    2014-05-01

    The development of spectral computed tomography (CT) using binned photon-counting detectors has garnered great interest in recent years and has enabled selective imaging of K-edge materials. A practical challenge in CT image reconstruction of K-edge materials is the mitigation of image artifacts that arise from reduced-view and/or noisy decomposed sinogram data. In this note, we describe and investigate sparsity-regularized penalized weighted least squares-based image reconstruction algorithms for reconstructing K-edge images from few-view decomposed K-edge sinogram data. To exploit the inherent sparseness of typical K-edge images, we investigate use of a total variation (TV) penalty and a weighted sum of a TV penalty and an ℓ1-norm with a wavelet sparsifying transform. Computer-simulation and experimental phantom studies are conducted to quantitatively demonstrate the effectiveness of the proposed reconstruction algorithms.

  4. Influence of Optical Properties on the Spin Polarization of Cu3P Photoelectrons

    NASA Astrophysics Data System (ADS)

    Chassé, A.; Niebergall, L.

    We have investigated the influence of optical properties of Cu(001) on the spin polarization in Cu3p photoelectron diffraction patterns. The refraction and absorption of light have been taken into account in the calculation of the dipole transition matrix element. Therefore, a general polarization vector of light is defined within a macroscopic theory of electromagnetic fields. Results are shown and discussed for Cu3p photoelectrons excited by linearly or circularly polarized light, respectively. It is shown that the optical behavior of crystals may cause a symmetry breaking in the angular dependence of the photoelectron intensity. Besides, there are strong quantitative changes in the related spin polarization of Cu3p photoelectrons.

  5. Application of X-ray K-edge densitometry in D and D operations

    SciTech Connect

    Jensen, T.; Aljundi, T.; Gray, J.N. |

    1998-12-31

    K-edge densitometry is a nondestructive assay technique which provides accurate measurement of heavy metal contamination in pipes, containers, and other items encountered in D and D operations. A prototype mobile K-edge instrument has been built and demonstrated in several applications. Results from measurements of uranium in pipes and spent reactor fuel plates, and quantification of mercury and lead in waste drums are presented. In this report the authors briefly describe the theory behind K-edge densitometry. They follow that with a description of the prototype system they have developed, and a presentation of results from demonstrations of this system. They conclude with a discussion of the potential for application of K-edge analysis in D and D operations.

  6. Interpretation of O K-edge EELS in zircon using a structural variation approach

    SciTech Connect

    Spence, John C.H; Jiang, Nan

    2009-12-01

    This work describes an approach to interpret the near-edge fine structure of electron energy-loss spectroscopy (EELS) of O K-edge in zircon using a structural variation method. The positions and intensities of several peaks in the O K-edge EELS spectrum are assigned to specific structural parameters. It suggests that the near-edge structures in EELS can be used to measure atomic structure changes.

  7. X-ray K-edge analysis of drain lines in Wilhelm Hall, Ames Laboratory

    SciTech Connect

    Jensen, T.; Whitmore, C. |

    1999-01-05

    From August 12--27, 1998 X-ray K-edge measurements were made on drain lines in seven rooms in Wilhelm Hall, Ames Laboratory. The purpose of these measurements was to determine the extent of thorium (and other heavy metal) contamination inside these pipes. The K-edge method is a noninvasive inspection technique that can provide accurate quantification of heavy metal contamination interior to an object. Of the seven drain lines inspected, one was found to have no significant contamination, three showed significant thorium deposits, two showed mercury contamination, and one line was found to contain mercury, thorium and uranium. The K-edge measurements were found to be consistent with readings from hand-held survey meters, and provided much greater detail on the location and amount of heavy metal contamination.

  8. SR high-speed K-edge subtraction angiography in the small animal (abstract)

    NASA Astrophysics Data System (ADS)

    Takeda, T.; Akisada, M.; Nakajima, T.; Anno, I.; Ueda, K.; Umetani, K.; Yamaguchi, C.

    1989-07-01

    To assess the ability of the high-speed K-edge energy subtraction system which was made at beamline 8C of Photon Factory, Tsukuba, we performed an animal experiment. Rabbits were used for the intravenous K-edge subtraction angiography. In this paper, the actual images of the artery obtained by this system, are demonstrated. The high-speed K-edge subtraction system consisted of movable silicon (111) monocrystals, II-ITV, and digital memory system. Image processing was performed by 68000-IP computer. The monochromatic x-ray beam size was 50×60 mm. Photon energy above and below iodine K edge was changed within 16 ms and 32 frames of images were obtained sequentially. The rabbits were anaesthetized by phenobarbital and a 5F catheter was inserted into inferior vena cava via the femoral vein. 1.5 ml/kg of contrast material (Conlaxin H) was injected at the rate of 0.5 ml/kg/s. TV images were obtained 3 s after the starting point of injection. By using this system, the clear K-edge subtracted images were obtained sequentially as a conventional DSA system. The quality of the images were better than that obtained by DSA. The dynamical blood flow was analyzed, and the best arterial image could be selected from the sequential images. The structures of aortic arch, common carotid arteries, right subclavian artery, and internal thoracic artery were obtained at the chest. Both common carotid arteries and vertebral arteries were recorded at the neck. The diameter of about 0.3-0.4 mm artery could be clearly revealed. The high-speed K-edge subtraction system demonstrates the very sharp arterial images clearly and dynamically.

  9. K-edge ratio method for identification of multiple nanoparticulate contrast agents by spectral CT imaging

    PubMed Central

    Ghadiri, H; Ay, M R; Shiran, M B; Soltanian-Zadeh, H

    2013-01-01

    Objective: Recently introduced energy-sensitive X-ray CT makes it feasible to discriminate different nanoparticulate contrast materials. The purpose of this work is to present a K-edge ratio method for differentiating multiple simultaneous contrast agents using spectral CT. Methods: The ratio of two images relevant to energy bins straddling the K-edge of the materials is calculated using an analytic CT simulator. In the resulting parametric map, the selected contrast agent regions can be identified using a thresholding algorithm. The K-edge ratio algorithm is applied to spectral images of simulated phantoms to identify and differentiate up to four simultaneous and targeted CT contrast agents. Results: We show that different combinations of simultaneous CT contrast agents can be identified by the proposed K-edge ratio method when energy-sensitive CT is used. In the K-edge parametric maps, the pixel values for biological tissues and contrast agents reach a maximum of 0.95, whereas for the selected contrast agents, the pixel values are larger than 1.10. The number of contrast agents that can be discriminated is limited owing to photon starvation. For reliable material discrimination, minimum photon counts corresponding to 140 kVp, 100 mAs and 5-mm slice thickness must be used. Conclusion: The proposed K-edge ratio method is a straightforward and fast method for identification and discrimination of multiple simultaneous CT contrast agents. Advances in knowledge: A new spectral CT-based algorithm is proposed which provides a new concept of molecular CT imaging by non-iteratively identifying multiple contrast agents when they are simultaneously targeting different organs. PMID:23934964

  10. The enhanced spontaneous dielectric polarization in Ga doped CuFeO{sub 2}

    SciTech Connect

    Shi, Liran; Wei, Meng; Huang, Junwei; Chen, Borong; Shang, Cui; Xia, Zhengcai Long, Zhuo; Ouyang, Zhongwen; Xia, Nianming

    2014-11-07

    The magnetic and dielectric polarization properties of the single crystal samples of CuFe{sub 1−x}Ga{sub x}O{sub 2} (x = 0 and 0.02) are investigated. Experimental results show that the magnetization and dielectric polarizations are anisotropy and coupled together. Compared with pure CuFeO{sub 2}, in the case with the magnetic field parallel to the c axis, a field-induced phase transition with a hysteresis is clearly observed between the five-sublattice (5SL) and three-sublattice (3SL) phases. Specially, an obvious spontaneous dielectric polarization is observed in CuFe{sub 0.98}Ga{sub 0.02}O{sub 2} in a lower magnetic field region, indicating that the Ga doping has an effect on the enhancement of spontaneous dielectric polarization. Based on the dilution effect, change of exchange interaction, and partial release of the spin frustration due to the structural modulation of the Ga ion dopant, the origin of the magnetization, and spontaneous polarization characteristics are discussed and the complete dielectric polarization diagrams are assumed.

  11. Magnetic circular x-ray dichroisms of Fe-Ni alloys at K edge.

    SciTech Connect

    Freeman, A. J.; Gofron, K. J.; Kimball, C. W.; Lee, P. L.; Montano, P. A.; Rao, F.; Wang, X.

    1997-04-03

    Magnetic Circular X-ray Dichroism (MCXD) studies at K edges of Fe-Ni alloys reveal changes of the MCXD signal with composition and crystal structure. We observe that the signal at the invar composition is of comparable strength as other compositions. Moreover, the edge position is strongly dependent on lattice constant. First principles calculations demonstrate that the shape and strength of the signal strongly depends on the crystal orientation, composition, and lattice constant. We find direct relation between the MCXD signal and the p DOS. We find that the MCXD at K edge probes the magnetism due to itinerant electrons.

  12. Spin polarization and exchange coupling of Cu and Mn atoms in paramagnetic CuMn diluted alloys induced by a Co layer

    SciTech Connect

    Abes, M.; Arena, D.; Atkinson, D.; Tanner, B.K.; Charlton, T.R.; Langridge, S.; Hase, T.P.A.; Ali, M.; Marrows, C.H.; Hickey, B.J.; Neudert, Al; Hicken, R.J.; Wilkins, S.B.; Mirone, A.; Lebegue, S.

    2010-11-09

    Using the surface, interface, and element specificity of x-ray resonant magnetic scattering in combination with x-ray magnetic circular dichroism, we have spatially resolved the magnetic spin polarization, and the associated interface proximity effect, in a Mn-based high-susceptibility material close to a ferromagnetic Co layer. We have measured the magnetic polarization of Mn and Cu3d electrons in paramagnetic CuMn alloy layers in [Co/Cu(x)/CuMn/Cu(x)]{sub 20} multilayer samples with varying copper layer thicknesses from x=0 to 25 {angstrom}. The size of the Mn and CuL{sub 2,3} edge dichroism shows a decrease in the Mn-induced polarization for increasing copper thickness indicating the dominant interfacial nature of the Cu and Mn spin polarization. The Mn polarization is much higher than that of Cu. Evidently, the Mn moment is a useful probe of the local spin density. Mn atoms appear to be coupled antiferromagnetically with the Co layer below x = 10 {angstrom} and ferromagnetically coupled above. In contrast, the interfacial Cu atoms remain ferromagnetically aligned to the Co layer for all thicknesses studied.

  13. Cu(2)ZnSnS(4) nanocrystal dispersions in polar liquids.

    PubMed

    Tosun, B Selin; Chernomordik, Boris D; Gunawan, Aloysius A; Williams, Bryce; Mkhoyan, K Andre; Francis, Lorraine F; Aydil, Eray S

    2013-05-01

    Cu(2)ZnSnS(4) (CZTS) nanocrystals sterically stabilized with oleic acid and oleylamine ligands and dispersed in nonpolar organic liquids have been extracted into, and electrostatically stabilized in, polar liquids by covering their surfaces with S(2-). PMID:23519191

  14. Investigation of Prussian Blue Analogs by XMCD at the K-edge of transition metals

    NASA Astrophysics Data System (ADS)

    Bordage, A.; Nataf, L.; Baudelet, F.; Bleuzen, A.

    2016-05-01

    Despite transition metal (TM) K-edge x-ray magnetic circular dichroism (XMCD) seems an interesting tool to get magnetic and structural information at the atomic scale, the effects originating this signal are still poorly understood. We thus initiated a deep investigation of the TM K-edge XMCD using Prussian Blue analogs (PBA) as model-compounds. In a recent study of the NiFe PBA family, we demonstrated that the XMCD signals at the TM K-edges strongly vary with external (mechanical) or internal (chemical) pressure and so that they are highly sensitive to small structural distortions. Following these first results, we extended this approach to the MnFe and CoFe families to evaluate the effect of electronic parameters (number of unpaired electrons of the M II TM) on the XMCD signal. All the results set milestones in the disentanglement of the components originating the XMCD signals at the K-edge of TM and will eventually help in a better understanding of the photomagnetic properties of PBAs.

  15. Depth-selective measurements of induced magnetic polarization in the Cu layer of Gd/Cu multilayers by [superscript 119] Sn Mössbauer Spectroscopy

    SciTech Connect

    Ohkochi, T.; Hosoito, N.; Mibu, K.

    2010-07-20

    We performed {sup 119}Sn Moessbauer spectroscopic measurements on Gd/Cu multilayers with {sup 119}Sn probing atoms. The Cu layers are delta-doped with Sn probes at a certain depth. Hyperfine fields are observed in the Moessbauer spectra at low temperatures below the Curie temperature of the Gd layers. From the temperature-dependent measurements, the hyperfine field is found to be proportional to the spontaneous magnetization of the Gd layer. The result indicates that the Gd magnetization induces magnetic polarization in the Cu layers. The hyperfine field per Gd magnetization is found to be {approx}40 kOe/{mu}{sub B(Gd)}, regardless of the position of the {sup 119}Sn atoms and the Cu thickness (20-40 {angstrom}), suggesting that the magnetic polarization in the Cu layer is uniform at any depth from the Gd/Cu interface.

  16. Hybrid-K-edge/X-ray Fluorescense Densitometry with Laser-Compton Scattered X-rays

    SciTech Connect

    Dr. Khalid Chouffani El Fassi

    2010-08-29

    The quantitative verification of the accountancy of fissile nuclear materials through independent measurements represents one of the key elements of nuclear materials Safeguards. Elemental probes of materials of interest to non-proliferation are critical to research strategy in order to identify sensitive advanced instrumentation detection technologies. Advanced instrumentation for material detection and accountability are needed for use in fuel cycle facilities for real-time in-process monitoring of separations-partitioning, fuels fabrication as well as for traditional safeguards activities. Radiation-based NDA (non-destructive analysis) techniques can provide some vital information about nuclear materials much more quickly, cheaply and safely than chemical or radio chemical analysis. Hybrid K-edge densitometry (HKED) is currently the most accurate nondestructive inspection technique that provides sensitive quantification of heavy metal contamination. HKED in a technique that exploits both K-edge absorption and X-ray fluorescence (XRF) and allows simultaneously greater elemental specificity and lower detection limits

  17. Ca K-Edge XAS as a Probe of Calcium Centers in Complex Systems

    PubMed Central

    2014-01-01

    Herein, Ca K-edge X-ray absorption spectroscopy (XAS) is developed as a means to characterize the local environment of calcium centers. The spectra for six, seven, and eight coordinate inorganic and molecular calcium complexes were analyzed and determined to be primarily influenced by the coordination environment and site symmetry at the calcium center. The experimental results are closely correlated to time-dependent density functional theory (TD-DFT) calculations of the XAS spectra. The applicability of this methodology to complex systems was investigated using structural mimics of the oxygen-evolving complex (OEC) of PSII. It was found that Ca K-edge XAS is a sensitive probe for structural changes occurring in the cubane heterometallic cluster due to Mn oxidation. Future applications to the OEC are discussed. PMID:25492398

  18. Electronic structure investigation of highly compressed aluminum with K edge absorption spectroscopy.

    PubMed

    Benuzzi-Mounaix, A; Dorchies, F; Recoules, V; Festa, F; Peyrusse, O; Levy, A; Ravasio, A; Hall, T; Koenig, M; Amadou, N; Brambrink, E; Mazevet, S

    2011-10-14

    The electronic structure evolution of highly compressed aluminum has been investigated using time resolved K edge x-ray absorption spectroscopy. A long laser pulse (500 ps, I(L)≈8×10(13) W/cm(2)) was used to create a uniform shock. A second ps pulse (I(L)≈10(17)  W/cm(2)) generated an ultrashort broadband x-ray source near the Al K edge. The main target was designed to probe aluminum at reshocked conditions up to now unexplored (3 times the solid density and temperatures around 8 eV). The hydrodynamical conditions were obtained using rear side visible diagnostics. Data were compared to ab initio and dense plasma calculations, indicating potential improvements in either description. This comparison shows that x-ray-absorption near-edge structure measurements provide a unique capability to probe matter at these extreme conditions and severally constrains theoretical approaches currently used. PMID:22107398

  19. Carbon K edge spectroscopy of internal interface and defect states of chemical vapor deposited diamond films

    SciTech Connect

    Nithianandam, J.; Rife, J.C. ); Windischmann, H. )

    1992-01-06

    We have made carbon {ital K} edge reflectivity and absorption measurements using synchrotron radiation on diamond crystals and chemical vapor deposited diamond films to determine their electronic structures. Our spectra of diamond films show that both {ital sp}{sup 2} and {ital sp}{sup 3} bonded carbon atoms are formed during initial nucleation and growth. Transmission spectra of a diamond film with 30 nm diameter cystallites show striking features below the carbon {ital sp}{sup 3} {ital K} edge due to internal interface states and/or defects. We compare these absorption features to x-ray absorption spectra of clean diamond (111) surface, graphite, and hydrocarbon gases to understand surface chemistry involved in the deposition process.

  20. Photon counting spectral CT: improved material decomposition with K-edge-filtered x-rays

    NASA Astrophysics Data System (ADS)

    Shikhaliev, Polad M.

    2012-03-01

    Photon counting spectral computed tomography (PCSCT) provides material selective CT imaging at a single CT scan and fixed tube voltage. The PCSCT data are acquired in several energy ranges (bins) arranged over the x-ray spectrum. The quasi-monoenergetic CT images are acquired in these energy bins and are used for material decomposition. The PCSCT exhibits inherent limitations when material decomposition is performed using energy bins. For effective material decomposition, the energy bins used for material decomposition should be sufficiently narrow and well separated. However, when narrow bins are used, a large fraction of the detected x-ray counts is lost and statistical noise is increased. Alternatively, the x-ray spectrum can be split into a few larger bins with no gap in between and all detected x-ray photons can be used for material decomposition. However, in this case the energy bins are too wide and not well separated, which results in suboptimal material decomposition. The above contradictory requirements can be resolved if the x-ray photons are physically removed from the regions of the energy spectrum between the energy bins. Such a selective removal can be performed using filtration of the x-ray beam by high-Z filter materials with appropriate positions of K-edge energies. The K-edge filtration of x-rays can, therefore, provide necessary gaps between the energy bins with no dose penalty to the patient. In the current work, we proposed using selective K-edge filtration of x-rays in PCSCT and performed the first experimental investigation of this approach. The PCSCT system included a cadmium zinc telluride semiconductor detector with 2 × 256 pixels and 1 × 1 mm2 pixel size, and five energy bins. The CT phantom had 14 cm diameter and included contrast elements of iodine, gold and calcifications with clinically relevant concentrations. The tube voltages of 60, 90 and 120 kVp were used. K-edge filters based on Ba (Ek = 37.44 keV) were used for a 60 kVp tube

  1. Phosphorus Speciation of Forest-soil Organic Surface Layers using P K-edge XANES Spectroscopy

    SciTech Connect

    J Prietzel; J Thieme; D Paterson

    2011-12-31

    The phosphorus (P) speciation of organic surface layers from two adjacent German forest soils with different degree of water-logging (Stagnosol, Rheic Histosol) was analyzed by P K-edge XANES and subsequent Linear Combination Fitting. In both soils, {approx}70% of the P was inorganic phosphate and {approx}30% organic phosphate; reduced P forms such as phosphonate were absent. The increased degree of water-logging in the Histosol compared to the Stagnosol did not affect P speciation.

  2. Phosphorus speciation of forest-soil organic surface layers using P K-edge XANES spectroscopy

    SciTech Connect

    Prietzel, Jörg; Thieme, Jürgen; Paterson, David

    2012-02-07

    The phosphorus (P) speciation of organic surface layers from two adjacent German forest soils with different degree of water-logging (Stagnosol, Rheic Histosol) was analyzed by P K-edge XANES and subsequent Linear Combination Fitting. In both soils, {approx} 70% of the P was inorganic phosphate and {approx} 30% organic phosphate; reduced P forms such as phosphonate were absent. The increased degree of water-logging in the Histosol compared to the Stagnosol did not affect P speciation.

  3. Magnetism and magnetoelectricity in the polar oxide α-Cu2V2O7

    NASA Astrophysics Data System (ADS)

    Lee, Y.-W.; Jang, T.-H.; Dissanayake, S. E.; Lee, Seunghun; Jeong, Yoon H.

    2016-01-01

    Single crystals of the orthorhombic polar oxide α-Cu2V2O7 with space group Fdd2 are synthesized and their physical properties are measured. Neutron powder diffraction is also performed on a polycrystal sample to extract the magnetic structure. The ground state is shown to be weakly ferromagnetic, that is, collinearly antiferromagnetic in the a-direction with a small remanent magnetization in the c-direction. When an external magnetic field is applied in the c-direction, further spin canting, accompanied by the induced electric polarization, occurs. It is demonstrated that the magnetoelectric effect in α-Cu2V2O7 is adequately described if spin-dependent p\\text-d hybridization due to spin-orbit coupling as well as magnetic domain effects are simultaneously taken into account. We discuss the implication of the present result in the search for materials with multiferroicity and/or magnetoelectricity.

  4. Self-Assembly of Glycine on Cu (001): The tale of Temperature and Polarity

    NASA Astrophysics Data System (ADS)

    Xu, Lifang; Xu, Jing; Lin, Zheshuai; Meng, Sheng; Wang, Enge

    Glycine on Cu(001) is used as an example to illustrate the critical role of molecular polarity and finite temperature effect in self-assembly of bio-molecules at a metal surface. A unified picture for glycine self-assembly on Cu(001) is derived based on full polarity compensation considerations. Temperature plays a non-trivial role: the ground-state structure at 0 K is absent at room temperature, where intermolecular hydrogen bonding overweighs competing molecule-substrate interactions. The unique p(2×4) structure predicted as the most stable structure was confirmed by ab initio molecular dynamics simulations, whose scanning tunneling microscopy images and anisotropic free-electron-like dispersion are in excellent agreement with experiments. Moreover, the rich self-assembling patterns including the heterochiral and homochiral phases, and their interrelationships are entirely governed by the same mechanism.

  5. A Simple Algorithm for Finding All k-Edge-Connected Components

    PubMed Central

    Wang, Tianhao; Zhang, Yong; Chin, Francis Y. L.; Ting, Hing-Fung; Tsin, Yung H.; Poon, Sheung-Hung

    2015-01-01

    The problem of finding k-edge-connected components is a fundamental problem in computer science. Given a graph G = (V, E), the problem is to partition the vertex set V into {V1, V2,…, Vh}, where each Vi is maximized, such that for any two vertices x and y in Vi, there are k edge-disjoint paths connecting them. In this paper, we present an algorithm to solve this problem for all k. The algorithm preprocesses the input graph to construct an Auxiliary Graph to store information concerning edge-connectivity among every vertex pair in O(Fn) time, where F is the time complexity to find the maximum flow between two vertices in graph G and n = ∣V∣. For any value of k, the k-edge-connected components can then be determined by traversing the auxiliary graph in O(n) time. The input graph can be a directed or undirected, simple graph or multigraph. Previous works on this problem mainly focus on fixed value of k. PMID:26368134

  6. Ligand K-edge x-ray absorption spectroscopy as a probe of ligand-metal bonding: Charge donation and covalency in copper-chloride systems

    SciTech Connect

    Shadle, S.E.; Hedman, B.; Solomon, E.I.; Hodgson, K.O.

    1994-09-14

    X-ray absorption spectra (XAS) have been measured at the chloride K-edge for a series of complexes containing chloride ligands bound to open shell d{sup 9} copper ions in order to probe ligand-metal bonding. The intensity of the pre-edge feature in these spectra reflects the covalency in the half-occupied d{sub x}{sup 2-}{sub y}{sup 2-} derived molecular orbital (HOMO) of the complex. The energy of the pre-edge feature as well as the energy of the rising absorption edge provides quantitative information about the covalency of the ligand-metal interaction, the charge donated by the chloride, and the energy of the copper d-manifold. The results demonstrate that ligand K-edge XAS features can be used to obtain information about ligand-metal bonding. The results also identify the chemical basis for trends in the XAS data for the following complexes: D{sub 4h} CuCl{sub 4}{sup 2-}, D{sub 2d} CuCl{sub 4}{sup 2-}, planar trans-CuCl{sub 2-} (pdmp){sub 2} (pdmp = N-phenyl-3,5-dimethylpyrazole), square pyramidal CuCl{sub 5}{sup 3-}, the planar dimer KCuCl{sub 3}, the distorted tetrahedral dimer (Ph{sub 4}P)CuCl{sub 3}, and two dimers with mixed ligation, one containing a bridging chloride, and the other, containing terminally bound chloride. Several of these results are supported by independent spectral data or by basic ligand field concepts. A geometric distortion from square planar to distorted tetrahedral results in a decrease in the chloride-copper HOMO covalency but an increase in the total charge donation by the chlorides. While the geometry can maximize the overlap for a highly covalent HOMO, this does not necessarily reflect the overall charge donation.

  7. Site-Specific Studies on X-Ray Magnetic Circular Dichroism at Fe K Edge for Transition-Metal Ferrites

    NASA Astrophysics Data System (ADS)

    Matsumoto, Kenji; Saito, Fumikazu; Toyoda, Takeshi; Ohkubo, Koichi; Yamawaki, Koji; Mori, Takeharu; Hirano, Keiichi; Tanaka, Masahiko; Sasaki, Satoshi

    2000-10-01

    Experiments on X-ray magnetic circular dichroism (XMCD) were performed with synchrotron radiation for Zn and Mn-Zn ferrites (normal-spinel structure) and Ni, Co and Cu ferrites and magnetite (inverse-spinel structure). The inverse-spinel ferrites have positive-to-negative dispersion-type XMCD signals in the pre-edge region of the Fe K edge, which originate from Fe3+ ions in the A sites. There are no such signals for normal-spinel ferrites. Two kinds of negative-to-positive dispersion-type XMCD signals were observed in 7.119-7.125 keV and 7.122-7.129 keV regions of the main edge, which are caused by a mixture of Fe3+ and Fe2+ ions of the B sites in magnetite and Fe3+ ions of the B sites in the other inverse-spinel ferrites, respectively. The B-site origin of the XMCD main-edge spectra was also confirmed by observation of X-ray resonant magnetic scattering for the 222 reflection of Ni ferrite.

  8. Parameters Influencing Sulfur Speciation in Environmental Samples Using Sulfur K-Edge X-Ray Absorption Near-Edge Structure

    PubMed Central

    Pongpiachan, Siwatt; Thumanu, Kanjana; Kositanont, Charnwit; Schwarzer, Klaus; Prietzel, Jörg; Hirunyatrakul, Phoosak; Kittikoon, Itthipon

    2012-01-01

    This paper aims to enhance the credibility of applying the sulfur K-edge XANES spectroscopy as an innovative “fingerprint” for characterizing environmental samples. The sensitivities of sulfur K-edge XANES spectra of ten sulfur compound standards detected by two different detectors, namely, Lytle detector (LyD) and Germanium detector (GeD), were studied and compared. Further investigation on “self-absorption” effect revealed that the maximum sensitivities of sulfur K-edge XANES spectra were achieved when diluting sulfur compound standards with boron nitride (BN) at the mixing ratio of 0.1%. The “particle-size” effect on sulfur K-edge XANES spectrum sensitivities was examined by comparing signal-to-noise ratios of total suspended particles (TSP) and particulate matter of less than 10 millionths of a meter (PM10) collected at three major cities of Thailand. The analytical results have demonstrated that the signal-to-noise ratios of sulfur K-edge XANES spectra were positively correlated with sulfate content in aerosols and negatively connected with particle sizes. The combination of hierarchical cluster analysis (HCA) and principal component analysis (PCA) has proved that sulfur K-edge XANES spectrum can be used to characterize German terrestrial soils and Andaman coastal sediments. In addition, this study highlighted the capability of sulfur K-edge XANES spectra as an innovative “fingerprint” to distinguish tsunami backwash deposits (TBD) from typical marine sediments (TMS). PMID:23193498

  9. Comparison of iodine K-edge subtraction and fluorescence subtraction imaging in an animal system

    NASA Astrophysics Data System (ADS)

    Zhang, H.; Zhu, Y.; Bewer, B.; Zhang, L.; Korbas, M.; Pickering, I. J.; George, G. N.; Gupta, M.; Chapman, D.

    2008-09-01

    K-Edge Subtraction (KES) utilizes the discontinuity in the X-ray absorption across the absorption edge of the selected contrast element and creates an image of the projected density of the contrast element from two images acquired just above and below the K-edge of the contrast element. KES has proved to be powerful in coronary angiography, micro-angiography, bronchography, and lymphatic imaging. X-ray fluorescence imaging is a successful technique for the detection of dilute quantities of elements in specimens. However, its application at high X-ray energies (e.g. at the iodine K-edge) is complicated by significant Compton background, which may enter the energy window set for the contrast material's fluorescent X-rays. Inspired by KES, Fluorescence Subtraction Imaging (FSI) is a technique for high-energy (>20 keV) fluorescence imaging using two different incident beam energies just above and below the absorption edge of a contrast element (e.g. iodine). The below-edge image can be assumed as a "background" image, which includes Compton scatter and fluorescence from other elements. The above-edge image will contain nearly identical spectral content as the below-edge image but will contain the additional fluorescence of the contrast element. This imaging method is especially promising with thick objects with dilute contrast materials, significant Compton background, and/or competing fluorescence lines from other materials. A quality factor is developed to facilitate the comparison. The theoretical value of the quality factor sets the upper limit that an imaging method can achieve when the noise is Poisson limited. The measured value of this factor makes two or more imaging methods comparable. Using the Hard X-ray Micro-Analysis (HXMA) beamline at the Canadian Light Source (CLS), the techniques of FSI and KES were critically compared, with reference to radiation dose, image acquisition time, resolution, signal-to-noise ratios, and quality factor.

  10. Neutral dissociation of hydrogen following photoexcitation of HCl at the chlorine K edge

    SciTech Connect

    Hansen, D.L.; Arrasate, M.E.; Martin, R.; Vanderford, B.; Lindle, D.W.; Cotter, J.; Neill, P.; Fisher, G.R.; Perera, R.C.; Leung, K.T.; Levin, J.C.; Sellin, I.A.; Simon, M.; Simon, M.; Uehara, Y.; Whitfield, S.B.

    1998-04-01

    Time-of-flight mass spectroscopy was used to study the relaxation dynamics of HCl following photoexcitation in the vicinity of the Cl K edge ({approximately}2.8keV) using monochromatic synchrotron radiation. At the lowest resonant excitation to the 6{sigma}{sup {asterisk}} antibonding orbital, almost half of the excited molecules decay by emission of a neutral H atom, mostly in coincidence with a highly charged Cl{sup n+} ion. The present work demonstrates that neutral-atom emission can be a significant decay channel for excited states with very short lifetimes (1 fs). {copyright} {ital 1998} {ital The American Physical Society}

  11. A Bremsstrahlung Spectrometer using k-edge and Differential Filters with Image plate dosimeters

    SciTech Connect

    Chen, C; Mackinnon, A; Beg, F; Chen, H; Key, M; King, J A; Link, A; MacPhee, A; Patel, P; Porkolab, M; Stephens, R; VanWoerkom, L; Akli, K; Freeman, R

    2008-05-02

    A Bremsstrahlung spectrometer using k-edge and differential filtering has been used with Image Plate dosimeters to measure the x-ray fluence from short-pulse laser/target interactions. An electron spectrometer in front of the Bremsstrahlung spectrometer deflects electrons from the x-ray line of sight and simultaneously measures the electron spectrum. The response functions were modeled with the Monte Carlo code Integrated Tiger Series 3.0 and the dosimeters calibrated with radioactive sources. Electron distributions with slope temperatures in the MeV range are inferred from the Bremsstrahlung spectra.

  12. A Bremsstrahlung spectrometer using k-edge and differential filters with image plate dosimeters

    SciTech Connect

    Chen, C. D.; Porkolab, M.; King, J. A.; Beg, F. N.; Key, M. H.; Chen, H.; Mackinnon, A. J.; MacPhee, A. G.; Patel, P. K.; Akli, K. U.; Stephens, R. B.; Freeman, R. R.; Link, A.; Van Woerkom, L. D.

    2008-10-15

    A Bremsstrahlung spectrometer using k-edge and differential filtering has been used with image plate dosimeters to measure the x-ray fluence from short-pulse laser/target interactions. An electron spectrometer in front of the Bremsstrahlung spectrometer deflects electrons from the x-ray line of sight and simultaneously measures the electron spectrum. The response functions were modeled with the Monte Carlo code INTEGRATED TIGER SERIES 3.0 and the dosimeters calibrated with radioactive sources. An electron distribution with a slope temperature of 1.3 MeV is inferred from the Bremsstrahlung spectra.

  13. Polarized Raman spectroscopy of Cu-poor and Zn-rich single-crystal Cu2ZnSnSe4

    NASA Astrophysics Data System (ADS)

    Nam, Dahyun; Kim, Jungcheol; Lee, Jae-Ung; Nagaoka, Akira; Yoshino, Kenji; Cha, Wonsuk; Kim, Hyunjung; Hwang, In Chul; Yoon, Kyung Byung; Cheong, Hyeonsik

    2014-10-01

    Cu2ZnSnSe4 (CZTSe) is a p-type semiconductor which has been developed as an absorber layer of polycrystalline thin film solar cells. Generally, Cu-poor and Zn-rich compositions tend to give the highest solar conversion efficiencies. Raman spectroscopy has been used to detect secondary phases such as ZnSe and Cu2SnSe3 in CZTSe thin films. However, the fundamental phonon modes in single-crystal CZTSe with a composition matching that of high-efficiency thin film solar cells have not yet been fully understood. We performed polarized Raman measurements on Cu-poor and Zn-rich single-crystal CZTSe and identified 12 peaks, including two low-frequency peaks. By comparing the polarization dependence of the Raman peaks with a group theoretical analysis, we concluded that the crystal structure of CZTSe single-crystal is kesterite and made appropriate peak assignments.

  14. Defect-induced Nonpolar-to-polar Transition at the Surface of CuInSe2

    SciTech Connect

    Jaffe, John E.; Zunger, Alex

    2003-09-10

    In contrast to zinc-blende semiconductors, where the nonpolar (110) surface has the lowest energy, our first-principles calculations on the chalcopyrite semiconductor CuInSe2 reveal that facets terminated by the (112)-cation and -Se polar surfaces are lower in energy than the unfaceted (110) plane, despite the resulting increased surface area. This explains the hitherto puzzling existence of polar microfacets on nominally nonpolar (110) chalcopyrite surfaces. The extraordinary stability of these polar facets originates from the effective neutralization of surface charge by low-energy ordered CuIn antisite or Cu vacancy surface defects, while the relaxed but defect-free (112) surface is metallic and much higher in energy. We explain the low carrier density of the observed faceted surface in terms of autocompensation between opposite-polarity facets.

  15. Second Generation Gold Nanobeacons for Robust K-Edge Imaging with Multi-Energy CT

    PubMed Central

    Schirra, Carsten O.; Senpan, Angana; Roessl, Ewald; Thran, Axel; Stacy, Allen J.; Wu, Lina; Proska, Roland; Pan, Dipanjan

    2012-01-01

    Spectral CT is the newest advancement in CT imaging technology, which enhances traditional CT images with the capability to image and quantify certain elements based on their distinctive K-edge energies. K-edge imaging feature recognizes high accumulations of targeted elements and presents them as colorized voxels against the normal grayscale X-ray background offering promise to overcome the relatively low inherent contrast within soft tissue and distinguish the high attenuation of calcium from contrast enhanced targets. Towards this aim, second generation gold nanobeacons (GNB2), which incorporate at least five times more metal than the previous generation was developed. The particles were synthesized as lipid-encapsulated, vascularly constrained (>120 nm) nanoparticle incorporating tiny gold nanoparticles (2–4 nm) within a polysorbate core. The choice of core material dictated to achieve a higher metal loading. The particles were thoroughly characterized by physicochemical techniques. This study reports one of the earlier examples of spectral CT imaging with gold nanoparticles demonstrating the potential for targeted in vitro and in vivo imaging and eliminates calcium interference with CT. The use of statistical image reconstruction shows high SNR may allow dose reduction and/or faster scan times. PMID:23185109

  16. K-edge shift and XANES investigation of laser driven reshock-compressed Aluminum

    NASA Astrophysics Data System (ADS)

    Benuzzi-Mounaix, Alessandra; Ravasio, Alessandra; Koenig, Michel; Festa, Floriane; Amadou, Nourou; Levy, Anna; Brambrink, Erik; Dorchies, Fabien; Peyrusse, Olivier; Mazevet, Stéphane; Recoules, Vanina; Hall, Tom

    2010-11-01

    The physical properties of warm dense matter, specially their structural properties, are still poorly known. In this work, K-edge shift and X-ray Absorption Near Edge Spectroscopy (XANES) of reshocked Aluminum have been investigated with the aim of bringing information on the evolution of its electronic structure. The experiment was performed at LULI where we used one long pulse (500 ps, IL 8 10^13 W/cm^2) to create the shock and a second picosecond beam (IL 10^17 W/cm^2) to generate an ultra-short broadband X-ray source near the Al K-edge. The spectra were registered by using two conical KAP Bragg crystals. By changing the delay between the two beams, we have been able to observe the modification of absorption spectra for different and extreme Al conditions, up to now unexplored (ρ <= 3 ρ0 and T <= 8 eV). The hydrodynamical Al conditions were measured by using VISARs interferometers and self-emission diagnostic. Experimental data are compared to various calculations.

  17. Animal experiments by K-edge subtraction angiography by using SR (abstract)

    NASA Astrophysics Data System (ADS)

    Anno, I.; Akisada, M.; Takeda, T.; Sugishita, Y.; Kakihana, M.; Ohtsuka, S.; Nishimura, K.; Hasegawa, S.; Takenaka, E.; Hyodo, K.; Ando, M.

    1989-07-01

    Ischemic heart disease is one of the most popular and lethal diseases for aged peoples in the world, and is usually diagnosed by transarterial selective coronary arteriography. However, it is rather invasive and somewhat dangerous, so that the selective coronary arteriography is not feasible for prospective screening of coronary occlusive heart disease. Conventional digital subtraction angiography (DSA) is widely known as a relatively noninvasive and useful technique is making a diagnosis of arterial occlusive disease, especially in making the diagnosis of ischemic heart disease. Conventional intravenous subtraction angiography by temporal subtraction, however, has several problems when applying to the moving objects. Digital subtraction method using high-speed switching above and below the K edge could be the ideal approach to this solution. We intend to make a synchrotron radiation digital K-edge subtraction angiography in the above policy, and to apply it to the human coronary ischemic disease on an outpatient basis. The principles and experimental systems have already been described in detail by our coworkers. Our prototype experimental system is situated at the AR (accumulation ring) for TRISTAN project of high energy physics. The available beam size is 70 mm by 120 mm. The electron energy of AR is 6.5 GeV and average beam current is approximately 10 mA. This paper will show the animal experiments of our K-edge subtraction system, and discuss some problems and technical difficulties. Three dogs, weighing approximately 15 kg, were examined to evaluate the ability of our prototype synchrotron radiation DSA unit, that we are now constructing. The dogs were anaesthetized with pentobarbital sodium, intravenously (30 mg/kg). Six french-sized (1.52 mm i.d.) pigtail catheter with multiple side holes were introduced via the right femoral vein into the right atrium by the cutdown technique under conventional x-ray fluoroscopic control. Respiration of the dogs was

  18. Polarized Raman scattering study of kesterite type Cu2ZnSnS4 single crystals

    NASA Astrophysics Data System (ADS)

    Guc, Maxim; Levcenko, Sergiu; Bodnar, Ivan V.; Izquierdo-Roca, Victor; Fontane, Xavier; Volkova, Larisa V.; Arushanov, Ernest; Pérez-Rodríguez, Alejandro

    2016-01-01

    A non-destructive Raman spectroscopy has been widely used as a complimentary method to X-ray diffraction characterization of Cu2ZnSnS4 (CZTS) thin films, yet our knowledge of the Raman active fundamental modes in this material is far from complete. Focusing on polarized Raman spectroscopy provides important information about the relationship between Raman modes and CZTS crystal structure. In this framework the zone-center optical phonons of CZTS, which is most usually examined in active layers of the CZTS based solar cells, are studied by polarized resonant and non-resonant Raman spectroscopy in the range from 60 to 500 cm-1 on an oriented single crystal. The phonon mode symmetry of 20 modes from the 27 possible vibrational modes of the kesterite structure is experimentally determined. From in-plane angular dependences of the phonon modes intensities Raman tensor elements are also derived. Whereas a strong intensity enhancement of the polar E and B symmetry modes is induced under resonance conditions, no mode intensity dependence on the incident and scattered light polarization configurations was found in these conditions. Finally, Lyddane-Sachs-Teller relations are applied to estimate the ratios of the static to high-frequency optic dielectric constants parallel and perpendicular to c-optical axis.

  19. Polarized Raman scattering study of kesterite type Cu2ZnSnS4 single crystals

    PubMed Central

    Guc, Maxim; Levcenko, Sergiu; Bodnar, Ivan V.; Izquierdo-Roca, Victor; Fontane, Xavier; Volkova, Larisa V.; Arushanov, Ernest; Pérez-Rodríguez, Alejandro

    2016-01-01

    A non-destructive Raman spectroscopy has been widely used as a complimentary method to X-ray diffraction characterization of Cu2ZnSnS4 (CZTS) thin films, yet our knowledge of the Raman active fundamental modes in this material is far from complete. Focusing on polarized Raman spectroscopy provides important information about the relationship between Raman modes and CZTS crystal structure. In this framework the zone–center optical phonons of CZTS, which is most usually examined in active layers of the CZTS based solar cells, are studied by polarized resonant and non-resonant Raman spectroscopy in the range from 60 to 500 cm−1 on an oriented single crystal. The phonon mode symmetry of 20 modes from the 27 possible vibrational modes of the kesterite structure is experimentally determined. From in-plane angular dependences of the phonon modes intensities Raman tensor elements are also derived. Whereas a strong intensity enhancement of the polar E and B symmetry modes is induced under resonance conditions, no mode intensity dependence on the incident and scattered light polarization configurations was found in these conditions. Finally, Lyddane-Sachs-Teller relations are applied to estimate the ratios of the static to high-frequency optic dielectric constants parallel and perpendicular to c-optical axis. PMID:26776727

  20. Polarized Raman scattering study of kesterite type Cu2ZnSnS4 single crystals.

    PubMed

    Guc, Maxim; Levcenko, Sergiu; Bodnar, Ivan V; Izquierdo-Roca, Victor; Fontane, Xavier; Volkova, Larisa V; Arushanov, Ernest; Pérez-Rodríguez, Alejandro

    2016-01-01

    A non-destructive Raman spectroscopy has been widely used as a complimentary method to X-ray diffraction characterization of Cu2ZnSnS4 (CZTS) thin films, yet our knowledge of the Raman active fundamental modes in this material is far from complete. Focusing on polarized Raman spectroscopy provides important information about the relationship between Raman modes and CZTS crystal structure. In this framework the zone-center optical phonons of CZTS, which is most usually examined in active layers of the CZTS based solar cells, are studied by polarized resonant and non-resonant Raman spectroscopy in the range from 60 to 500 cm(-1) on an oriented single crystal. The phonon mode symmetry of 20 modes from the 27 possible vibrational modes of the kesterite structure is experimentally determined. From in-plane angular dependences of the phonon modes intensities Raman tensor elements are also derived. Whereas a strong intensity enhancement of the polar E and B symmetry modes is induced under resonance conditions, no mode intensity dependence on the incident and scattered light polarization configurations was found in these conditions. Finally, Lyddane-Sachs-Teller relations are applied to estimate the ratios of the static to high-frequency optic dielectric constants parallel and perpendicular to c-optical axis. PMID:26776727

  1. Development of a graphite polarization analyzer for resonant inelastic x-ray scattering

    SciTech Connect

    Gao Xuan; Burns, Clement; Li Chengyang; Casa, Diego; Upton, Mary; Gog, Thomas; Kim, Jungho

    2011-11-15

    Resonant inelastic x-ray scattering (RIXS) is a powerful technique for studying electronic excitations in correlated electron systems. Current RIXS spectrometers measure the changes in energy and momentum of the photons scattered by the sample. A powerful extension of the RIXS technique is the measurement of the polarization state of the scattered photons which contains information about the symmetry of the excitations. This long-desired addition has been elusive because of significant technical challenges. This paper reports the development of a new diffraction-based polarization analyzer which discriminates between linear polarization components of the scattered photons. The double concave surface of the polarization analyzer was designed as a good compromise between energy resolution and throughput. Such a device was fabricated using highly oriented pyrolytic graphite for measurements at the Cu K-edge incident energy. Preliminary measurements on a CuGeO{sub 3} sample are presented.

  2. Polarized Rayleigh and Raman Study of single CuO Nanowire

    NASA Astrophysics Data System (ADS)

    Lu, Qiujie; Wu, Jian; Gutierrez, Humberto; Russin, Timothy; Eklund, Peter

    2009-03-01

    Crystalline CuO is an interesting Ferroelectric and Ferromagnetic system which we have recently grown in nanowire (NW) form. In this paper, we present results of Raman and Rayleigh scattering studies of individual CuO NWs to probe optical antenna effects that we first discovered in GaP NWs. We have shown that these antenna effects can, in general, strongly mask Raman selection rules in semiconducting nanowires[1]. Using a microRaman spectrometer, polarized light scattering experiments (backscattering geometry) were carried on NWs suspended over holes in a TEM grid. TEM was therefore also used to identify the growth axis and determine the NW diameter. As a function of the angle q between the NW axis and the incident laser field, we collect the Rayleigh scattering intensity as well as the Raman LO and TO optical phonon scattering intensity. These results can then be used to quantify the optical antenna effects in the CuO system. NWs of different diameters, from 70nm to 200 nm were studied; the results depend dramatically on the NW diameter. Our results will be compared to EM calculations based on the DDA approximation. This work is supported by NSF NIRT, grant DMR-0304178. [1] Chen G. Jian Wu, etc., Nano Lett. 2008 Vol.8 pp. 1341-1346.

  3. Magnetic properties of O2 adsorbed on Cu(100): A spin-polarized metastable He beam study

    NASA Astrophysics Data System (ADS)

    Kurahashi, M.; Sun, X.; Yamauchi, Y.

    2012-12-01

    Magnetic properties of O2 adsorbed on Cu(100) were investigated by monitoring the spin dependence in Penning ionization of metastable He(23S) under external magnetic fields of 0-5 T. A clear spin polarization was found for the 3σg and 1πu orbitals of physisorbed O2 under external fields, while the spin polarization disappeared when O2 was changed into the chemisorbed state at >50 K. The magnetic susceptibility at the surface of multilayer and monolayer of physisorbed O2 on Cu(100) was similar to that for the bulk liquid O2. Observed exchange splittings and spin polarization suggest that a physisorbed O2 molecule has a magnetic moment close to that for an isolated O2 molecule even at submonolayer coverages, while a density functional theory calculation predicts a much reduced magnetic moment for O2 directly adsorbed on Cu(100).

  4. Exotic sources of x-rays for iodine K-edge angiography

    SciTech Connect

    Carr, R.

    1993-08-01

    Digital Subtractive Angiography (DSA) has been performed to image human coronary arteries using wiggler radiation from electron storage rings. The significant medical promise of this procedure motivates the development of smaller and less costly x-ray sources. Several exotic sources are candidates for consideration, using effects such as Cherenkov, channeling, coherent bremsstrahlung, laser backscattering, microundulator, parametric, Smith-Purcell, and transition radiation. In this work we present an analysis of these effects as possible sources of intense x-rays at the iodine K-edge at 33.169 key. The criteria we use are energy, efficiency, flux, optical properties, and technical realizability. For each of the techniques, we find that they suffer either from low flux, a low energy cutoff, target materials heating, too high electron beam energy requirement, optical mismatch to angiography, or a combination of these. We conclude that the foreseeable state-of-the-art favors a compact storage ring design.

  5. Three dimensional mapping of strontium in bone by dual energy K-edge subtraction imaging

    NASA Astrophysics Data System (ADS)

    Cooper, D. M. L.; Chapman, L. D.; Carter, Y.; Wu, Y.; Panahifar, A.; Britz, H. M.; Bewer, B.; Zhouping, W.; Duke, M. J. M.; Doschak, M.

    2012-09-01

    The bones of many terrestrial vertebrates, including humans, are continually altered through an internal process of turnover known as remodeling. This process plays a central role in bone adaptation and disease. The uptake of fluorescent tetracyclines within bone mineral is widely exploited as a means of tracking new tissue formation. While investigation of bone microarchitecture has undergone a dimensional shift from 2D to 3D in recent years, we lack a 3D equivalent to fluorescent labeling. In the current study we demonstrate the ability of synchrotron radiation dual energy K-edge subtraction (KES) imaging to map the 3D distribution of elemental strontium within rat vertebral samples. This approach has great potential for ex vivo analysis of preclinical models and human tissue samples. KES also represents a powerful tool for investigating the pharmokinetics of strontium-based drugs recently approved in many countries around the globe for the treatment of osteoporosis.

  6. K-edge and mirror filtered X-ray grating interferometers

    NASA Astrophysics Data System (ADS)

    Stutman, Dan; Finkenthal, Michael

    2012-07-01

    Talbot-Lau interferometers having good angular resolution and fringe contrast are needed for refraction imaging of biomedical objects with conventional X-ray tubes. To maximize angular resolution the interferometers must work in high Talbot orders, which in turn narrows the spectral region of good fringe contrast. To select this narrow region from the broad tube spectrum we study spectral filtering with K-edge absorbers or with grazing incidence X-ray mirrors. For instance, using a total reflection Au mirror at 2.7 mrad incidence in conjunction with a Mo tube at 50 kVp we obtain up to 30% contrast in the fifth Talbot order. The improved angular sensitivity and contrast achieved with quasi-monochromatic filtering enable single-exposure refraction imaging of soft tissues. The mirror filtering offers also a path for increasing the interferometer contrast at high X-ray energy.

  7. NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy

    PubMed Central

    Silatani, Mahsa; Lima, Frederico A.; Penfold, Thomas J.; Rittmann, Jochen; Reinhard, Marco E.; Rittmann-Frank, Hannelore M.; Borca, Camelia; Grolimund, Daniel; Milne, Christopher J.; Chergui, Majed

    2015-01-01

    Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein’s function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump–probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center. PMID:26438842

  8. Photoabsorption and photoemission of magnesium diboride at the Mg K edge

    NASA Astrophysics Data System (ADS)

    Prince, K. C.; Feyer, V.; Tadich, A.; Thomsen, L.; Cowie, B. C. C.

    2009-10-01

    The Mg K edge photoabsorption spectrum and the B 1s, Mg 1s, Mg 2p and valence band photoemission spectra of polycrystalline magnesium diboride have been measured. The photoabsorption spectra of the diboride and the oxide, which is present as an impurity, were separated by measuring the Auger electron partial yield at electron energies characteristic of each phase. The spectra are consistent with published calculations of the density of unoccupied p symmetry states. Better agreement is obtained with calculations for the ground state of the system than with ones for the excited state. Valence band photoemission spectra were measured at photon energies corresponding to core resonances, but, within the signal to noise level of the spectra, no resonant enhancement was observed. This is consistent with the delocalized nature of the valence band.

  9. Vanadium K-edge XANES in vanadium-bearing model compounds: a full multiple scattering study.

    PubMed

    Benzi, Federico; Giuli, Gabriele; Della Longa, Stefano; Paris, Eleonora

    2016-07-01

    A systematic study is presented on a set of vanadium-bearing model compounds, representative of the most common V coordination geometries and oxidation states, analysed by means of vanadium K-edge X-ray absorption near-edge spectroscopy calculations in the full multiple scattering (FMS) framework. Analysis and calibration of the free parameters of the theory under the muffin-tin approximation (muffin-tin overlap and interstitial potential) have been carried out by fitting the experimental spectra using the MXAN program. The analysis shows a correlation of the fit parameters with the V coordination geometry and oxidation state. By making use of this correlation it is possible to approach the study of unknown V-bearing compounds with useful preliminary information. PMID:27359143

  10. B K-Edge XANES of Superstructural Units in Borate Glasses

    SciTech Connect

    Sipr, O.; Simunek, A.; Rocca, F.

    2007-02-02

    The potential of x-ray absorption near-edge structure (XANES) spectroscopy for studying medium range order in borate glasses is assessed by theoretical modelling of the spectra. B K edge XANES is calculated in case that B atoms are located in isolated BO3 and BO4 units and in case that B atom are located in superstructural units of 9-15 atoms. It is found that boroxol ring and diborate and ditriborate superstructural units give rise to spectra which differ from spectra obtained by a mere superposition of spectra of isolated BO3 and BO4 units. On the other hand, spectra of pentaborate and triborate units do not differ significantly from spectra of isolated BO3 and BO4.

  11. Si K Edge Structure and Variability in Galactic X-Ray Binaries

    NASA Astrophysics Data System (ADS)

    Schulz, Norbert S.; Corrales, Lia; Canizares, Claude R.

    2016-08-01

    We survey the Si K edge structure in various absorbed Galactic low-mass X-ray binaries (LMXBs) to study states of silicon in the inter- and circum-stellar medium. The bulk of these LMXBs lie toward the Galactic bulge region and all have column densities above 1022 cm‑2. The observations were performed using the Chandra High Energy Transmission Grating Spectrometer. The Si K edge in all sources appears at an energy value of 1844 ± 0.001 eV. The edge exhibits significant substructure that can be described by a near edge absorption feature at 1849 ± 0.002 eV and a far edge absorption feature at 1865 ± 0.002 eV. Both of these absorption features appear variable with equivalent widths up to several mÅ. We can describe the edge structure using several components: multiple edge functions, near edge absorption excesses from silicates in dust form, signatures from X-ray scattering optical depths, and a variable warm absorber from ionized atomic silicon. The measured optical depths of the edges indicate much higher values than expected from atomic silicon cross sections and interstellar medium abundances, and they appear consistent with predictions from silicate X-ray absorption and scattering. A comparison with models also indicates a preference for larger dust grain sizes. In many cases, we identify Si xiii resonance absorption and determine ionization parameters between log ξ = 1.8 and 2.8 and turbulent velocities between 300 and 1000 km s‑1. This places the warm absorber in close vicinity of the X-ray binaries. In some data, we observe a weak edge at 1.840 keV, potentially from a lesser contribution of neutral atomic silicon.

  12. Preliminary study of an angiographic and angio-tomographic technique based on K-edge filters

    SciTech Connect

    Golosio, Bruno; Brunetti, Antonio; Oliva, Piernicola; Carpinelli, Massimo; Luca Masala, Giovanni; Meloni, Francesco; Battista Meloni, Giovanni

    2013-08-14

    Digital Subtraction Angiography is commonly affected by artifacts due to the patient movements during the acquisition of the images without and with the contrast medium. This paper presents a preliminary study on an angiographic and angio-tomographic technique based on the quasi-simultaneous acquisition of two images, obtained using two different filters at the exit of an X-ray tube. One of the two filters (K-edge filter) contains the same chemical element used as a contrast agent (gadolinium in this study). This filter absorbs more radiation with energy just above the so called K-edge energy of gadolinium than the radiation with energy just below it. The other filter (an aluminium filter in this study) is simply used to suppress the low-energy contribution to the spectrum. Using proper calibration curves, the two images are combined to obtain an image of the contrast agent distribution. In the angio-tomographic application of the proposed technique two images, corresponding to the two filter types, are acquired for each viewing angle of the tomographic scan. From the two tomographic reconstructions, it is possible to obtain a three-dimensional map of the contrast agent distribution. The technique was tested on a sample consisting of a rat skull placed inside a container filled with water. Six small cylinders with 4.7 mm internal diameter containing the contrast medium at different concentrations were placed inside the skull. In the plain angiographic application of the technique, five out of six cylinders were visible, with gadolinium concentration down to 0.96%. In the angio-tomographic application, all six cylinders were visible, with gadolinium concentration down to 0.49%. This preliminary study shows that the proposed technique can provide images of the contrast medium at low concentration without most of the artifacts that are present in images produced by conventional techniques. The results encourage further investigation on the feasibility of a clinical

  13. Towards in-vivo K-edge imaging using a new semi-analytical calibration method

    NASA Astrophysics Data System (ADS)

    Schirra, Carsten; Thran, Axel; Daerr, Heiner; Roessl, Ewald; Proksa, Roland

    2014-03-01

    Flat field calibration methods are commonly used in computed tomography (CT) to correct for system imperfections. Unfortunately, they cannot be applied in energy-resolving CT when using bow-tie filters owing to spectral distortions imprinted by the filter. This work presents a novel semi-analytical calibration method for photon-counting spectral CT systems, which is applicable with a bow-tie filter in place and efficiently compensates pile-up effects at fourfold increased photon flux compared to a previously published method without degradation of image quality. The achieved reduction of the scan time enabled the first K-edge imaging in-vivo. The method employs a calibration measurement with a set of flat sheets of only a single absorber material and utilizes an analytical model to predict the expected photon counts, taking into account factors such as x-ray spectrum and detector response. From the ratios of the measured x-ray intensities and the corresponding simulated photon counts, a look-up table is generated. By use of this look-up table, measured photon-counts can be corrected yielding data in line with the analytical model. The corrected data show low pixel-to-pixel variations and pile-up effects are mitigated. Consequently, operations like material decomposition based on the same analytical model yield accurate results. The method was validated on a experimental spectral CT system equipped with a bow-tie filter in a phantom experiment and an in-vivo animal study. The level of artifacts in the resulting images is considerably lower than in images generated with a previously published method. First in-vivo K-edge images of a rabbit selectively depict vessel occlusion by an ytterbium-based thermoresponsive polymer.

  14. Experimental spectral measurements of heavy K-edge filtered beams for x-ray computed mammotomography

    PubMed Central

    Crotty, D J; McKinley, R L; Tornai, M P

    2012-01-01

    A dual modality computed mammotomography (CmT) and single photon emission computed tomography (SPECT) system for dedicated 3D breast imaging is in development. Using heavy K-edge filtration, the CmT component narrows the energy spectrum of the cone-shaped x-ray beam incident on the patient’s pendant, uncompressed breast. This quasi-monochromatic beam is expected to improve discrimination of tissue with similar attenuation coefficients while restraining absorbed dose to below that of dual view mammography. Previous simulation studies showed the optimal energy that maximizes dose efficiency for a 50/50% adipose/glandular breast is between 30 and 40 keV. This study experimentally validates these results using pre-breast and post-breast spectral measurements made under tungsten tube voltages between 40 and 100 kVp using filter materials with K-edge values ranging from 15 to 70 keV. Different filter material thicknesses are used, approximately equivalent to the 200th and 500th attenuating value layer (VL) thickness. Cerium (K = 40.4 keV) filtered post-breast spectra for 8–18 cm breasts are measured for a range of breast compositions. Figures of merit include mean beam energy, spectral full-width at tenth-maximum, beam hardening and dose for the range of breast sizes. Measurements corroborate simulation results, indicating that for a given dose, a 200th VL of cerium filtration may have optimal performance in the dedicated mammotomography paradigm. PMID:17228108

  15. Killing of Bacillus Megaterium Spores by X-Rays at the Phosphorus K-Edge

    NASA Technical Reports Server (NTRS)

    Richmond, Robert C.; Frigo, Sean P.; Ehret, Charles F.; Rose, M. Franklin (Technical Monitor)

    2001-01-01

    This study continues a progression of experiments on the radiation-induced killing of bacterial spores that began at the Argonne National Laboratory in 1957. A series of aliquots of Bacillus megaterium spores were prepared onto polycarbonate filters and irradiated with photons of 2159 eV compared to 2140 eV energy on the 2-IDB beamline at the Advanced Photon Source. Flux density was approximately 10 photons/sec/mm . The phosphorous K-edge absorption spectrum in these spores was determined to peak at 2159 eV, wheras 2140 eV was determined to be outside that absorption spectrum. Spores on filters were irradiated at ambient conditions, and were either immediately plated for colony formation after irradiation, or were held for postirradiation exposure to oxygen prior to plating. Slopes of survival curves from the four conditions of irradiation, i.e., two photon energies each comparing immediate plating vs postirradiation holding, were used for quantitative determination of differences in rates of spore killing over a range of radiation doses. It was found that spores irradiated at the phosphorus K-edge were killed 20% more efficiently than when irradiated with 2140eV photons, and this was true for both immediate plating and postirradiation holding in air. Postirradiation holding in air increased killing efficiency by about 12% for both photon energies compared to plating immediately after irradiation. The increase of killing efficiency with postirradiation holding is less than expected from earlier experiments using relatively low-flux X-rays, and raises the possibility of dose-mitigation by radical-radical recombination in the case of high-flux X-rays from the synchrotron.

  16. Killing of Bacillus Megaterium Spores by X-rays at the Phosphorus K-edge

    NASA Technical Reports Server (NTRS)

    Richmond, Robert C.; Frigo, Sean P.; Ehret, Charles F.; Rose, M. Franklin (Technical Monitor)

    2001-01-01

    This study continues a progression of experiments on the radiation-induced killing of bacterial spores that began at the Argonne National Laboratory in 1957. A series of aliquots of Bacillus megaterium spores were prepared onto polycarbonate filters and irradiated with photons of 2159 eV compared to 2140 eV energy on the 2-IDB beamline at the Advanced Photon Source. Flux density was approximately 10(exp 18) photons/sec/sq mm. The phosphorous K-edge absorption spectrum in these spores was determined to peak at 2159 eV, wheras 2140 eV was determined to be outside that absorption spectrum. Spores on filters were irradiated at ambient conditions, and were either immediately plated for colony formation after irradiation, or were held for postirradiation exposure to oxygen prior to plating. Slopes of survival curves from the four conditions of irradiation, i.e., two photon energies each comparing immediate plating vs postirradiation holding, were used for quantitative determination of differences in rates of spore killing over a range of radiation doses. It was found that spores irradiated at the phosphorus K-edge were killed 20% more efficiently than when irradiated with 2140 eV photons, and this was true for both immediate plating and postirradiation holding in air. Postirradiation holding in air increased killing efficiency by about 12% for both photon energies compared to plating immediately after irradiation. The increase of killing efficiency with postirradiation holding is less than expected from earlier experiments using relatively low-flux X-rays, and raises the possibility of dose-mitigation by radical-radical recombination in the case of high-flux X-rays from the synchrotron.

  17. Optical Properties of CuInSe2 Bulk Material Characterized by a Fixed Polarizer-Rotating Analyzer Spectroscopic Ellipsometer

    NASA Astrophysics Data System (ADS)

    Hidalgo, M. L.; Lachab, M.; Zouaoui, A.; Alhamed, M.; Llinares, C.; Peyrade, J. P.; Galibert, J.

    1997-03-01

    In the present paper, we have investigated the optical properties of CuInSe2 single and polycrystals using a broad band fixed polarizer-rotating analyzer spectroscopic ellipsometer (RAE) in the spectral range 250 to 1700 nm. The wavelength dependence of CuInSe2 optical constants was studied assuming a two-phase system: the ambient medium and the sample. We have determined interband transition energies near and above the bandgap by a detailed analysis of the absorption spectrum and through the third joint-density-of-states (JDOS) derivative computation. Measurements were carried out on nearly-stoichiometric and In-rich CuInSe2 substrates.

  18. The growth of heteroepitaxial CuInSe{sub 2} on free-standing N-polar GaN

    SciTech Connect

    Shih, Cheng-Hung; Lo, Ikai You, Shuo-Ting; Tsai, Cheng-Da; Tseng, Bae-Heng; Chen, Yun-Feng; Chen, Chiao-Hsin; Lee, Chuo-Han; Lee, Wei-I; Hsu, Gary Z. L.

    2014-12-15

    We report that chalcopyrite CuInSe{sub 2} thin films were grown on free-standing N-polar GaN (0001{sup -}) by molecular beam epitaxy. X-ray diffraction showed that the CuInSe{sub 2} thin film was grown in (112) orientation, and its peak of rocking curve with full width at half maximum of about 897.8 arc-sec indicated the epitaxial growth of CuInSe{sub 2} (112) film on N-polar GaN. Microstructure analysis of the CuInSe{sub 2 } showed that the large lattice mismatch (28.5%) between CuInSe{sub 2 } and GaN is accommodated by domain matching, and no interface reaction occurs between CuInSe{sub 2} and GaN. Our experimental results show that GaN is stable for the epitaxial growth of CuInSe{sub 2} thin film, which exhibits a promising potential for optoelectronic applications.

  19. DOPING AND BOND LENGTH CONTRIBUTIONS TO Mn K-EDGE SHIFT IN La1-xSrxMnO3 AND THEIR CORRELATION WITH ELECTRICAL TRANSPORT BEHAVIOUR.

    SciTech Connect

    PANDEY,S.K.; KHALID,S.; BINDU, R.; KUMAR, A.; PIMPALE, A.V.

    2006-12-04

    The experimental Mn K-edge x-ray absorption spectra of La{sub 1-x}Sr{sub x}MnO{sub 3}, x = 0 - 0.7 are compared with the band structure calculations using spin polarized density functional theory. It is explicitly shown that there is a correspondence between the inflection point on the absorption edge and the center of gravity of the unoccupied Mn 4p-band. This correspondence has been used to separate the doping and size contributions to edge shift due to variation in number of electrons in valence band and Mn-O bond lengths, respectively when Sr is doped into LaMnO{sub 3}. Such separation is helpful to find the localization behavior of charge carriers and to understand the observed transport properties and type of charge carrier participating in the conduction process in these compounds.

  20. Determining the Sulfur species in the dispersants Corexit 9500A and 9527A applying S K-edge XANES spectroscopy

    NASA Astrophysics Data System (ADS)

    Bovenkamp-Langlois, Lisa; Roy, Amitava

    2016-05-01

    The dispersants Corexit 9500A and 9527A were used extensively during the Deepwater Horizon oil spill in the Gulf of Mexico. Sulfur K-edge X-ray absorption near edge structure (XANES) spectroscopy was used to investigate the dispersants for the sulfur based components. The main sulfur containing component should be dioctyl sodium sulfosuccinate (DOSS). S K-edge XANES analysis shows that indeed the major sulfur species in both kinds of Corexit (9500A and 9527A) is sulfonic acid which is a part of DOSS. In addition some fraction of sulfone was detected.

  1. Molecular anisotropy effects in carbon K-edge scattering: depolarized diffuse scattering and optical anisotropy

    SciTech Connect

    Stone, Kevin H.

    2014-07-14

    Some polymer properties, such as conductivity, are very sensitive to short- and intermediate-range orientational and positional ordering of anisotropic molecular functional groups, and yet means to characterize orientational order in disordered systems are very limited. We demonstrate that resonant scattering at the carbon K-edge is uniquely sensitive to short-range orientation correlations in polymers through depolarized scattering at high momentum transfers, using atactic polystyrene as a well-characterized test system. Depolarized scattering is found to coexist with unpolarized fluorescence, and to exhibit pronounced anisotropy. We also quantify the spatially averaged optical anisotropy from low-angle reflectivity measurements, finding anisotropy consistent with prior visible, x-ray absorption, and theoretical studies. The average anisotropy is much smaller than that in the depolarized scattering and the two have different character. Both measurements exhibit clear spectral signatures from the phenyl rings and the polyethylene-like backbone. Discussion focuses on analysis considerations and prospects for using this depolarized scattering for studies of disorder in soft condensed matter.

  2. Photoabsorption spectra of potassium and rubidium near the K-edge

    SciTech Connect

    Azuma, Y.; Berry, H.G.; Cowan, P.L.

    1995-08-01

    We have used a high-temperature circulating heat-pipe absorption cell together with monochromatized X-ray beams at the X24A and X23A2 beam lines at the NSLS to obtain photoabsorption spectra of potassium and rubidium at their K- and KM-edges. The photon-energy ranges lay near 3600 eV and 15200 eV, respectively. We have also obtained first measurements of the LII and LIII edges in cesium. Although the K-edge photoabsorptions of the rare gases have been studied, there is little previous work on other atomic vapors. Most of the edges and resonance peaks that we observed have now been identified using Dirac Hartree-Fock calculations. As a check, we have compared these results with those obtained previously in closed-shell rare-gas absorption spectra. The absolute energies were obtained through a calibration of the X24A systems using measurements of several metal L-edges in the 3200-5000 eV energy range. We found that the 4p resonance in potassium is significantly enhanced compared with the corresponding situation in argon. Likewise, the 5p resonance in krypton is unresolved from the background ionization cross section, whereas it is well resolved in rubidium. As suggested by Amusia, these enhancements may be due to the enhanced potential seen in the excited state of the alkali systems as a result of the presence of an s-electron which reduces the nuclear shielding.

  3. Calibration of Energy-Specific TDDFT for Modeling K-edge XAS Spectra of Light Elements.

    PubMed

    Lestrange, Patrick J; Nguyen, Phu D; Li, Xiaosong

    2015-07-14

    X-ray absorption spectroscopy (XAS) has become a powerful technique in chemical physics, because of advances in synchrotron technology that have greatly improved its temporal and spectroscopic resolution. Our recent work on energy-specific time-dependent density functional theory (ES-TDDFT) allows for the direct calculation of excitation energies in any region of the absorption spectrum, from UV-vis to X-ray. However, the ability of different density functional theories to model X-ray absorption spectra (XAS) of light elements has not yet been verified for ES-TDDFT. This work is a calibration of the ability of existing DFT kernels and basis sets to reproduce experimental K-edge excitation energies. Results were compared against 30 different transitions from gas-phase experiments. We focus on six commonly used density functionals (BHandHLYP, B3LYP, PBE1PBE, BP86, HSE06, LC-ωPBE) and various triple-ζ basis sets. The effects of core and diffuse functions are also investigated. PMID:26575736

  4. Time-Dependent Density Functional Calculations of Ligand K-Edge X-Ray Absorption Spectra

    SciTech Connect

    DeBeer George, S.; Petrenko, T.; Neese, F.

    2007-07-10

    X-ray absorption spectra (XAS) at the Cl and S K edge and Mo L edge have been calculated at the TDDFT level for a series of dioxomolybdenum complexes LMoO{sub 2}X (L = hydrotris(3,5-dimethyl-1-pyrazolyl)borate, X = Cl, SCH{sub 2}Ph, OPh), which play an important role in modeling the catalytic cycle of the sulfite oxidase enzyme. Also, the XAS spectra of model molecules of the Mo complexes have been simulated and interpreted in terms of the Mo 4d orbital splitting, in order to find possible correlations with the spectral pattern of the complexes. Comparison with the available experimental data allows us to assess the performances of the present computational scheme to describe the core excitations in large bioinorganic systems. The theoretical interpretation of the spectral features of both the metal and ligand core excitations in terms of the oscillator strength distribution provides important insight into the covalency of the metal-ligand bond.

  5. Prediction of Iron K-Edge Absorption Spectra Using Time-Dependent Density Functional Theory

    SciTech Connect

    George, S.DeBeer; Petrenko, T.; Neese, F.

    2009-05-14

    Iron K-edge X-ray absorption pre-edge features have been calculated using a time-dependent density functional approach. The influence of functional, solvation, and relativistic effects on the calculated energies and intensities has been examined by correlation of the calculated parameters to experimental data on a series of 10 iron model complexes, which span a range of high-spin and low-spin ferrous and ferric complexes in O{sub h} to T{sub d} geometries. Both quadrupole and dipole contributions to the spectra have been calculated. We find that good agreement between theory and experiment is obtained by using the BP86 functional with the CP(PPP) basis set on the Fe and TZVP one of the remaining atoms. Inclusion of solvation yields a small improvement in the calculated energies. However, the inclusion of scalar relativistic effects did not yield any improved correlation with experiment. The use of these methods to uniquely assign individual spectral transitions and to examine experimental contributions to backbonding is discussed.

  6. Demonstration of enhanced K-edge angiography using a cerium target x-ray generator

    SciTech Connect

    Sato, Eiichi; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Ichimaru, Toshio; Sato, Shigehiro; Takayama, Kazuyoshi; Ido, Hideaki

    2004-11-01

    The cerium target x-ray generator is useful in order to perform enhanced K-edge angiography using a cone beam because K-series characteristic x rays from the cerium target are absorbed effectively by iodine-based contrast mediums. The x-ray generator consists of a main controller, a unit with a Cockcroft-Walton circuit and a fixed anode x-ray tube, and a personal computer. The tube is a glass-enclosed diode with a cerium target and a 0.5-mm-thick beryllium window. The maximum tube voltage and current were 65 kV and 0.4 mA, respectively, and the focal-spot sizes were 1.0x1.3 mm. Cerium K{alpha} lines were left using a barium sulfate filter, and the x-ray intensity was 0.48 {mu}C/kg at 1.0 m from the source with a tube voltage of 60 kV, a current of 0.40 mA, and an exposure time of 1.0 s. Angiography was performed with a computed radiography system using iodine-based microspheres. In coronary angiography of nonliving animals, we observed fine blood vessels of approximately 100 {mu}m with high contrasts.

  7. The blue of iron in mineral pigments: a Fe K-edge XANES study of vivianite

    NASA Astrophysics Data System (ADS)

    Figueiredo, M. O.; Silva, T. P.; Veiga, J. P.

    2010-05-01

    Iron is a powerful chromophore element whose pigmenting properties were the first to be recognized among transition metals. The interest in blue iron minerals as pigments for painting was enhanced with the use of vivianite—a natural hydrated ferrous phosphate, Fe3(PO4)2ṡ8H2O—which in medieval Europe became an alternative to the expensive lapis lazuli, (Na, Ca)4(AlSiO4)3(SO4, Cl, S), a member of the ultramarines whose appreciated blue tone is due to the presence of sulfur polyanions. Conversely, vivianite coloring is attributed to the intervalence charge transfer (IVCT) Fe2+-Fe3+ that in later decades was studied by optical techniques and Mössbauer spectroscopy. However, the aging of blue vivianite pigments in old paintings has become a serious concern for conservators, but the aging process still awaits a satisfactory explanation. As an input to this problem, an X-ray absorption near-edge structure (XANES) study at the Fe K-edge of vivianite with different colors and origins was undertaken at the European Synchrotron Radiation Facility using the instrumental facilities of beamline ID-21. The analysis of pre-edge features corroborates previous data on the origin of vivianite color and emphasizes the need for a precautious assessment of iron speciation on the exclusive basis of XANES data. Actual results are discussed and further work is outlined.

  8. Using X-ray, K-edge densitometry in spent fuel characterization

    SciTech Connect

    Jensen, T.; Aljundi, T.; Gray, J.N.

    1998-06-01

    There are instances where records for spent nuclear fuel are incomplete, as well as cases where fuel assemblies have deteriorated during storage. To bring these materials into compliance for long term storage will require determination of parameters such as enrichment, total fissionable material, and burnup. To obtain accurate estimates of these parameters will require the combination of information from different inspection techniques. A method which can provide an accurate measure of the total uranium in the spent fuel is X-ray K-edge densitometry. To assess the potential for applying this method in spent fuel characterization, the authors have measured the amount of uranium in stacks of reactor fuel plates containing nuclear materials of different enrichments and alloys. They have obtained good agreement with expected uranium concentrations ranging from 60 mg/cm{sup 2} to 3,000 mg/cm{sup 2}, and have demonstrated that these measurements can be made in a high radiation field (> 200 mR/hr).

  9. K-edge imaging with the XPAD3 hybrid pixel detector, direct comparison of CdTe and Si sensors

    NASA Astrophysics Data System (ADS)

    Cassol, F.; Portal, L.; Graber-Bolis, J.; Perez-Ponce, H.; Dupont, M.; Kronland, C.; Boursier, Y.; Blanc, N.; Bompard, F.; Boudet, N.; Buton, C.; Clémens, J. C.; Dawiec, A.; Debarbieux, F.; Delpierre, P.; Hustache, S.; Vigeolas, E.; Morel, C.

    2015-07-01

    We investigate the improvement from the use of high-Z CdTe sensors for pre-clinical K-edge imaging with the hybrid pixel detectors XPAD3. We compare XPAD3 chips bump bonded to Si or CdTe sensors in identical experimental conditions. Image performance for narrow energy bin acquisitions and contrast-to-noise ratios of K-edge images are presented and compared. CdTe sensors achieve signal-to-noise ratios at least three times higher than Si sensors within narrow energy bins, thanks to their much higher detection efficiency. Nevertheless Si sensors provide better contrast-to-noise ratios in K-edge imaging when working at equivalent counting statistics, due to their better estimation of the attenuation coefficient of the contrast agent. Results are compared to simulated data in the case of the XPAD3/Si detector. Good agreement is observed when including charge sharing between pixels, which have a strong impact on contrast-to-noise ratios in K-edge images.

  10. K-edge imaging with the XPAD3 hybrid pixel detector, direct comparison of CdTe and Si sensors.

    PubMed

    Cassol, F; Portal, L; Graber-Bolis, J; Perez-Ponce, H; Dupont, M; Kronland, C; Boursier, Y; Blanc, N; Bompard, F; Boudet, N; Buton, C; Clémens, J C; Dawiec, A; Debarbieux, F; Delpierre, P; Hustache, S; Vigeolas, E; Morel, C

    2015-07-21

    We investigate the improvement from the use of high-Z CdTe sensors for pre-clinical K-edge imaging with the hybrid pixel detectors XPAD3. We compare XPAD3 chips bump bonded to Si or CdTe sensors in identical experimental conditions. Image performance for narrow energy bin acquisitions and contrast-to-noise ratios of K-edge images are presented and compared. CdTe sensors achieve signal-to-noise ratios at least three times higher than Si sensors within narrow energy bins, thanks to their much higher detection efficiency. Nevertheless Si sensors provide better contrast-to-noise ratios in K-edge imaging when working at equivalent counting statistics, due to their better estimation of the attenuation coefficient of the contrast agent. Results are compared to simulated data in the case of the XPAD3/Si detector. Good agreement is observed when including charge sharing between pixels, which have a strong impact on contrast-to-noise ratios in K-edge images. PMID:26133567

  11. Photoabsorption study of Bacillus megaterium, DNA and Related Biological Materials in the Phosphorus K-edge Region

    NASA Technical Reports Server (NTRS)

    Frigo, Sean P.; McNulty,Ian; Richmond, Robert C.; Ehret, Charles F.

    2003-01-01

    We have measured the x-ray transmission spectra of several biologically related samples in the phosphorus K-edge absorption region. These include red phosphorus, hydrated sodium phosphate (Na3PO4 12 H2O), deoxyribonucleic acid (DNA), adenosinetriphosphate (ATP), diolylphosphatidyl choline (DOPC), and Bacillus megaterium spores. Red phosphorus essentially displays an edge-jump. All other spectra are similar in form and energy position, where each is dominated by a narrower, more intense first peak and a broader but less intense second peak. The corresponding K-edge absorption thresholds are shifted towards higher energy relative to that for red phosphorus, as expected for increasing degrees of phosphorus oxidation. The B.meguterium spectrum has aspects common to both the phosphate and DNA spectra and is therefore interpreted as a composite of spectra arising from DNA/RNA and phosphates within the spore. The B. megaterium spore spectrum provides needed information for resonant radiation damage studies in the phosphorus K-edge absorption region by identifying candidate photoexcitations. In addition, the absorption spectra will be useful in macromolecular crystallography studies employing anomalous dispersion effects at the phosphorus K-edge.

  12. Photoabsorption Study of Bacillus megaterium, DNA and Related Biological Materials in the Phosphorus K-edge Region

    NASA Technical Reports Server (NTRS)

    Frigo, Sean P.; McNulty, Ian; Richmond, Robert C.; Ehret, Charles F.

    2002-01-01

    We have measured the x-ray transmission spectra of several biologically related samples in the phosphorus K-edge absorption region. These include elemental red phosphorus, hydrated sodium phosphate (Na3PO4.12H2O), deoxyribonucleic acid (DNA), adenosinetriphosphate (ATP), diolylphosphatidyl choline (DOPC), and Bacillus megaterium spores. Elemental red phosphorus essentially displays an edge-jump. All other spectra are similar in form and energy position. Each spectrum for these substances is dominated by a narrower, more intense first peak and a broader but less intense second peak. The corresponding K-edge absorption thresholds are shifted towards higher energy relative to that for elemental red phosphorus, as expected for increasing degrees of phosphorus oxidation. The B. megaterium spectrum has aspects common to both the phosphate and DNA spectra and is therefore interpreted as a composite of spectra arising from DNA/RNA and phosphates within the spore. The B. megaterium spore spectrum provides needed information for resonant radiation damage studies in the phosphorus K-edge absorption region by identifying candidate photoexcitations. In addition,the absorption spectra will be useful in macromolecular crystallography studies employing anomalous dispersion effects at the phosphorus K-edge.

  13. Demonstration of enhanced K-edge angiography utilizing a samarium x-ray generator

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Izumisawa, Mitsuru; Takahashi, Kiyomi; Sato, Shigehiro; Ichimaru, Toshio; Takayama, Kazuyoshi

    2006-08-01

    The samarium-target x-ray tube is useful in order to perform cone-beam K-edge angiography because K-series characteristic x-rays from the samarium target are absorbed effectively by iodine-based contrast media. This generator consists of the following components: a constant high-voltage power supply, a filament power supply, a turbomolecular pump, and an x-ray tube. The x-ray tube is a demountable diode which is connected to the turbomolecular pump and consists of the following major devices: a samarium target, a tungsten hairpin cathode (filament), a focusing (Wehnelt) electrode, a polyethylene terephthalate x-ray window 0.25 mm in thickness, and a stainless-steel tube body. In the x-ray tube, the positive high voltage is applied to the anode (target) electrode, and the cathode is connected to the tube body (ground potential). In this experiment, the tube voltage applied was from 50 to 70 kV, and the tube current was regulated to within 0.10 mA by the filament temperature. The exposure time is controlled in order to obtain optimum x-ray intensity. The electron beams from the cathode are converged to the target by the focusing electrode, and bremsstrahlung x-rays were absorbed using a 50-µm-thick tungsten filter. The x-ray intensity was 1.04 μGy/s at 1.0 m from the x-ray source with a tube voltage of 60 kV and a tube current of 0.10 mA, and angiography was performed using a computed radiography system and iodine-based microspheres 15 µm in diameter. In angiography of non-living animals, we observed fine blood vessels of approximately 100 µm with high contrasts.

  14. Extended X- ray absorption fine structure study at the K-edge of copper in mixed ligand complexes having benzimidazole as one of the ligands

    NASA Astrophysics Data System (ADS)

    Hinge, V. K.; Joshi, S. K.; Nitin Nair, N.; Singh Verma, Vikram; Shrivastava, B. D.; Prasad, J.; Srivastava, K.

    2014-09-01

    Extended X-ray absorption fine structure (EXAFS) spectra have been studied at the K-edge of copper in some of its biologically important complexes, viz., [Cu(BzImH)4X2] and [Cu(BzIm)2], where X= Cl, Br, 1/2SO4, ClO4, NO3, and BzIm = Benzimidazolato anion. The spectra have been recorded using a bent crystal 0.4 m Cauchois-type transmission spectrograph. The positions of EXAFS maxima and minima have been used to determine the bond lengths in the complexes with the help of three different methods, namely, Levy's, Lytle's and Lytle, Sayers and Stern's (L.S.S.) methods. The phase uncorrected bond lengths have also been determined from Fourier transforms of the experimental spectra. The results obtained from these methods have been discussed and it has been found that the results obtained by L.S.S. method are comparable with the results obtained by Fourier transformation method and that these two methods give phase uncorrected bond lengths.

  15. Local Structure of CuIn3Se5

    SciTech Connect

    Chang, C. H.; Wei, S. H.; Leyarovska, N.; Johnson, J. W.; Zhang, S. B.; Stanbery, B. J.; Anderson, T. J.

    2000-01-01

    The results of a detailed EXAFS study of the Cu-K, In-K, and Se-K edges CuIn3Se5 are reported. The Cu and In first nearest neighbor local structures were found to be almost identical to those in CuInSe2.

  16. Probing single magnon excitations in Sr₂IrO₄ using O K-edge resonant inelastic x-ray scattering

    SciTech Connect

    Liu, X.; Dean, M. P. M.; Liu, J.; Chiuzbaian, S. G.; Jaouen, N.; Nicolaou, A.; Yin, W. G.; Rayan Serrao, C.; Ramesh, R.; Ding, H.; Hill, J. P.

    2015-04-28

    Resonant inelastic X-ray scattering (RIXS) at the L-edge of transition metal elements is now commonly used to probe single magnon excitations. Here we show that single magnon excitations can also be measured with RIXS at the K-edge of the surrounding ligand atoms when the center heavy metal elements have strong spin-orbit coupling. This is demonstrated with oxygen K-edge RIXS experiments on the perovskite Sr₂IrO₄, where low energy peaks from single magnon excitations were observed. This new application of RIXS has excellent potential to be applied to a wide range of magnetic systems based on heavy elements, for which the L-edge RIXS energy resolutions in the hard X-ray region is usually poor.

  17. Nitrogen K-edge x-ray absorption near edge structure of pyrimidine-containing nucleotides in aqueous solution

    SciTech Connect

    Shimada, Hiroyuki Minami, Hirotake; Okuizumi, Naoto; Sakuma, Ichiro; Ukai, Masatoshi; Fujii, Kentaro; Yokoya, Akinari; Fukuda, Yoshihiro; Saitoh, Yuji

    2015-05-07

    X-ray absorption near edge structure (XANES) was measured at energies around the N K-edge of the pyrimidine-containing nucleotides, cytidine 5′-monophosphate (CMP), 2′-deoxythymidine 5′-monophosphate (dTMP), and uridine 5′-monophosphate (UMP), in aqueous solutions and in dried films under various pH conditions. The features of resonant excitations below the N K-edge in the XANES spectra for CMP, dTMP, and UMP changed depending on the pH of the solutions. The spectral change thus observed is systematically explained by the chemical shift of the core-levels of N atoms in the nucleobase moieties caused by structural changes due to protonation or deprotonation at different proton concentrations. This interpretation is supported by the results of theoretical calculations using density functional theory for the corresponding nucleobases in the neutral and protonated or deprotonated forms.

  18. Studies on effective atomic numbers, electron densities from mass attenuation coefficients near the K edge in some samarium compounds.

    PubMed

    Akman, F; Durak, R; Turhan, M F; Kaçal, M R

    2015-07-01

    The effective atomic numbers and electron densities of some samarium compounds were determined using the experimental total mass attenuation coefficient values near the K edge in the X-ray energy range from 36.847 up to 57.142 keV. The measurements, in the region from 36.847 to 57.142 keV, were done in a transmission geometry utilizing the Kα2, Kα1, Kβ1 and Kβ2 X-rays from different secondary source targets excited by the 59.54 keV gamma-photons from an Am-241 annular source. This paper presents the first measurement of the effective atomic numbers and electron densities for some samarium compounds near the K edge. The results of the study showed that the measured values were in good agreement with the theoretically calculated ones. PMID:25880612

  19. Nitrogen K-edge x-ray absorption near edge structure of pyrimidine-containing nucleotides in aqueous solution

    NASA Astrophysics Data System (ADS)

    Shimada, Hiroyuki; Minami, Hirotake; Okuizumi, Naoto; Sakuma, Ichiro; Ukai, Masatoshi; Fujii, Kentaro; Yokoya, Akinari; Fukuda, Yoshihiro; Saitoh, Yuji

    2015-05-01

    X-ray absorption near edge structure (XANES) was measured at energies around the N K-edge of the pyrimidine-containing nucleotides, cytidine 5'-monophosphate (CMP), 2'-deoxythymidine 5'-monophosphate (dTMP), and uridine 5'-monophosphate (UMP), in aqueous solutions and in dried films under various pH conditions. The features of resonant excitations below the N K-edge in the XANES spectra for CMP, dTMP, and UMP changed depending on the pH of the solutions. The spectral change thus observed is systematically explained by the chemical shift of the core-levels of N atoms in the nucleobase moieties caused by structural changes due to protonation or deprotonation at different proton concentrations. This interpretation is supported by the results of theoretical calculations using density functional theory for the corresponding nucleobases in the neutral and protonated or deprotonated forms.

  20. Probing single magnon excitations in Sr₂IrO₄ using O K-edge resonant inelastic x-ray scattering

    DOE PAGESBeta

    Liu, X.; Dean, M. P. M.; Liu, J.; Chiuzbaian, S. G.; Jaouen, N.; Nicolaou, A.; Yin, W. G.; Rayan Serrao, C.; Ramesh, R.; Ding, H.; et al

    2015-04-28

    Resonant inelastic X-ray scattering (RIXS) at the L-edge of transition metal elements is now commonly used to probe single magnon excitations. Here we show that single magnon excitations can also be measured with RIXS at the K-edge of the surrounding ligand atoms when the center heavy metal elements have strong spin-orbit coupling. This is demonstrated with oxygen K-edge RIXS experiments on the perovskite Sr₂IrO₄, where low energy peaks from single magnon excitations were observed. This new application of RIXS has excellent potential to be applied to a wide range of magnetic systems based on heavy elements, for which the L-edgemore » RIXS energy resolutions in the hard X-ray region is usually poor.« less

  1. Binding mechanism of Cu(II) at the clay-water interface by powder and polarized EXAFS spectroscopy

    NASA Astrophysics Data System (ADS)

    Schlegel, Michel L.; Manceau, Alain

    2013-07-01

    The sorption mechanism of Cu(II) on the 2:1 magnesian clay hectorite, the 2:1 aluminous clay montmorillonite, and the 1:1 aluminous clay kaolinite was investigated at pH 5.4-6.0 and 0.5 M NaCl ionic strength by solution chemistry and powder and polarized XANES and EXAFS spectroscopy. Divalent copper was not photoreduced under the intense synchrotron X-ray beam and retained its usual square (bi)pyramidal coordination with four equatorial oxygens (Oeq) at 1.93-1.96 Å and one to two axial oxygens (Oax) at 2.56-2.58 Å. The angular dependence of XANES spectra, the measured angle of 57-58° between the Cu-Oeq atomic pair and the direction perpendicular to the clay layer plane ([0 0 1]∗), and the detection and polarization dependence of neighboring Al/Mg and Si cationic shells, together indicate that Cu(II) is bonded to the edges of the clay layers as an inner-sphere complex. Based on the number of Mg/Al and Si nearest neighbors, the Cu(Oeq)4(Oax)1-2 polyhedron is attached to the clay surface by sharing one to three edges with the structural Al/Mg octahedra and zero to three corners with the Si/Al tetrahedra. Copper has an unusually high coordination on the two dioctahedral aluminous clays, explained by the presence at their surface of distorted empty cavities which can accommodate irregular coordination polyhedra. The steric match between the distorted empty octahedral cavities and the Jahn-Teller distorted Cu polyhedra provides a rationale to explain the higher affinity of Cu(II) for Al octahedral sheets, including the hydrargillite sheet of lithiophorite ([Al,Li][MnO2]O2[OH]2) as observed in nature.

  2. Comparison of quantitative k-edge empirical estimators using an energy-resolved photon-counting detector

    NASA Astrophysics Data System (ADS)

    Zimmerman, Kevin C.; Gilat Schmidt, Taly

    2016-03-01

    Using an energy-resolving photon counting detector, the amount of k-edge material in the x-ray path can be estimated using a process known as material decomposition. However, non-ideal effects within the detector make it difficult to accurately perform this decomposition. This work evaluated the k-edge material decomposition accuracy of two empirical estimators. A neural network estimator and a linearized maximum likelihood estimator with error look-up tables (A-table method) were evaluated through simulations and experiments. Each estimator was trained on system-specific calibration data rather than specific modeling of non-ideal detector effects or the x-ray source spectrum. Projections through a step-wedge calibration phantom consisting of different path lengths through PMMA, aluminum, and a k-edge material was used to train the estimators. The estimators were tested by decomposing data acquired through different path lengths of the basis materials. The estimators had similar performance in the chest phantom simulations with gadolinium. They estimated four of the five densities of gadolinium with less than 2mg/mL bias. The neural networks estimates demonstrated lower bias but higher variance than the A-table estimates in the iodine contrast agent simulations. The neural networks had an experimental variance lower than the CRLB indicating it is a biased estimator. In the experimental study, the k-edge material contribution was estimated with less than 14% bias for the neural network estimator and less than 41% bias for the A-table method.

  3. Characterization of extracellular polymeric substances in the biofilms of typical bacteria by the sulfur K-edge XANES spectroscopy.

    PubMed

    Lin, Huirong; Ye, Chengsong; Lv, Lu; Zheng, Clark Renjun; Zhang, Shenghua; Zheng, Lei; Zhao, Yidong; Yu, Xin

    2014-08-01

    A combined approach of physicochemical extraction and sulfur K-edge X-ray absorption near-edge structure (XANES) spectroscopy was applied to characterize the extracellular polymeric substances (EPS) of typical bacterial biofilms in this study. Physicochemical analysis showed variation of the contents of DNA, polysaccharide and protein in different fractions of EPS in different mediums. The sulfur K-edge XANES analysis yielded a variety of spectra. Spectral fitting of the XANES spectra utilizing a large set of model compounds showed that there was more reduced sulfur in both LB-EPS (loosely bound EPS) and TB-EPS (tightly bound EPS) of all the biofilms in LB medium than in R2A medium. More oxidized sulfur was identified in LB-EPS than that in TB-EPS, suggesting different niches and physiological heterogeneity in the biofilms. Our results suggested that the sulfur K-edge XANES can be a useful tool to analyze the sulfur speciation in EPS of biofilms. PMID:25108733

  4. K-edge XANES investigation of octakis(DMSO)lanthanoid(III) complexes in DMSO solution and solid iodides

    PubMed Central

    D’Angelo, Paola; Migliorati, Valentina; Spezia, Riccardo; De Panfilis, Simone; Persson, Ingmar; Zitolo, Andrea

    2014-01-01

    The potentiality of high energy XANES (X-ray absorption near edge structure) as a structural tool for lanthanoid-containing systems has been explored. The K-edge XANES spectra of La3+, Gd3+, and Lu3+ ions both in DMSO solution and solid octakis(DMSO) lanthanoid(III) iodides have been analysed. Although the K-edges of lanthanoids cover the energy range 38 (La) to 65 (Lu) keV, the large widths of the core hole states do not appreciably reduce the potential structural information of XANES data. We show that, for lanthanoid compounds, accurate structural parameters are obtained from the analysis of K-edge XANES signal if a deconvolution procedure is carried out. We found that in solid octakis(DMSO) lanthanoid(III) iodides the Ln3+ ions are coordinated by eight DMSO ligands arranged in a quite symmetric fashion. In DMSO solution the Ln3+ ions retain a regular eight-coordination structure and the coordination number does not change along the series. At variance with water the second coordination shell has been found to provide a negligible contribution to the XANES spectra of Ln3+ ions in DMSO solution. PMID:23657739

  5. Three-dimensional labeling of newly formed bone using synchrotron radiation barium K-edge subtraction imaging

    NASA Astrophysics Data System (ADS)

    Panahifar, Arash; Swanston, Treena M.; Pushie, M. Jake; Belev, George; Chapman, Dean; Weber, Lynn; Cooper, David M. L.

    2016-07-01

    Bone is a dynamic tissue which exhibits complex patterns of growth as well as continuous internal turnover (i.e. remodeling). Tracking such changes can be challenging and thus a high resolution imaging-based tracer would provide a powerful new perspective on bone tissue dynamics. This is, particularly so if such a tracer can be detected in 3D. Previously, strontium has been demonstrated to be an effective tracer which can be detected by synchrotron-based dual energy K-edge subtraction (KES) imaging in either 2D or 3D. The use of strontium is, however, limited to very small sample thicknesses due to its low K-edge energy (16.105 keV) and thus is not suitable for in vivo application. Here we establish proof-of-principle for the use of barium as an alternative tracer with a higher K-edge energy (37.441 keV), albeit for ex vivo imaging at the moment, which enables application in larger specimens and has the potential to be developed for in vivo imaging of preclinical animal models. New bone formation within growing rats in 2D and 3D was demonstrated at the Biomedical Imaging and Therapy bending magnet (BMIT-BM) beamline of the Canadian Light Source synchrotron. Comparative x-ray fluorescence imaging confirmed those patterns of uptake detected by KES. This initial work provides a platform for the further development of this tracer and its exploration of applications for in vivo development.

  6. K-edge XANES investigation of octakis(DMSO)lanthanoid(III) complexes in DMSO solution and solid iodides.

    PubMed

    D'Angelo, Paola; Migliorati, Valentina; Spezia, Riccardo; De Panfilis, Simone; Persson, Ingmar; Zitolo, Andrea

    2013-06-14

    The potential of high energy XANES (X-ray absorption near edge structure) as a tool for the structural analysis of lanthanoid-containing systems has been explored. The K-edge XANES spectra of La(3+), Gd(3+), and Lu(3+) ions both in DMSO solution and solid octakis(DMSO)lanthanoid(III) iodides have been analysed. Although the K-edges of lanthanoids cover the energy range of 38 (La) to 65 (Lu) keV, the large widths of the core hole states do not appreciably reduce the potential structural information of the XANES data. We show that, for lanthanoid compounds, accurate structural parameters are obtained from the analysis of K-edge XANES signals if a deconvolution procedure is carried out. We found that in solid octakis(DMSO)lanthanoid(III) iodides the Ln(3+) ions are coordinated by eight DMSO ligands arranged in a quite symmetric fashion. In DMSO solution the Ln(3+) ions retain a regular eight-coordination structure and the coordination number does not change along the series. In contrast to when in water the second coordination shell has been found to provide a negligible contribution to the XANES spectra of Ln(3+) ions in DMSO solution. PMID:23657739

  7. Cu,Zn-Superoxide Dismutase-Mediated Redox Regulation of Jumonji Domain Containing 3 Modulates Macrophage Polarization and Pulmonary Fibrosis.

    PubMed

    He, Chao; Larson-Casey, Jennifer L; Gu, Linlin; Ryan, Alan J; Murthy, Shubha; Carter, A Brent

    2016-07-01

    M2 macrophages are implicated in the development of pulmonary fibrosis as they generate profibrotic signals. The polarization process, at least in part, is regulated by epigenetic modulation. Because Cu,Zn-superoxide dismutase-induced H2O2 can polarize macrophages to a profibrotic M2 phenotype, we hypothesized that modulation of the redox state of the cell is involved in the epigenetic modulation of the macrophage phenotype. In this study, we show that signal transducer and activator of transcription 6 (STAT6) regulates Jumonji domain containing (Jmjd) 3, a histone H3 lysine 27 demethylase, and mutation of a redox-sensitive cysteine in STAT6 attenuates jmjd3 expression. Moreover, Jmjd3 deficiency abrogates profibrotic M2 gene expression. Treatment with leflunomide, which reduces mitochondrial reactive oxygen species production and tyrosine phosphorylation, inhibits jmjd3 expression and M2 polarization, as well as development of a fibrotic phenotype. Taken together, these observations provide evidence that the redox regulation of Jmjd3 is a unique regulatory mechanism for Cu,Zn-superoxide dismutase-mediated profibrotic M2 polarization. Furthermore, leflunomide, which reduces reactive oxygen species production and tyrosine phosphorylation, may prove to be therapeutic in the treatment of asbestos-induced pulmonary fibrosis. PMID:26699812

  8. Ti K-edge EXAFS and XANES study on tektites from different strewnfields

    NASA Astrophysics Data System (ADS)

    Wang, L.; Furuta, T.; Okube, M.; Yoshiasa, A.

    2011-12-01

    The concentration and local structure of each element may have various kinds of information about the asteroid impact and mass extinction. Farges and Brown have discussed about the Ti local structure by XANES, and concluded that Ti in tektite occupies 4-coordinated site. EXAFS can be analyzed to give precise information about the distance from Ti to near neighbors. The XAFS measurement of Ti local structure was preformed at the beamline 9C of the Photon Factory in KEK, Tsukuba, Japan. The specimens of tektites are from different strewnfields, they are: indochinite, bediasite, hainanite, philippinite, australite and moldavite. Sample for comparison are Libya desert glass and suevite. The k3χ(k) function was transformed into the radial structure function (RSF) for Ti K-edge of six tektites. The RSF for the Ti atom in indochinite and bediasite are similar; hainanite, australite and philippinite are similar; and moldavite is discriminated from others. It indicates that they have the same local atomic environmental around the Ti atoms and extended structure respectively. Coordination numbers and radial structure function are determined by EXAFS analyses (Table 1). We classified the tektites in three types: in indochinite and bediasite, Ti occupies 4-coordinated tetrahedral site and Ti-O distances are 1.84-1.81 Å; in hainanite, australite and philippinite, Ti occupies 5-coordinated trigonal bi-pyramidal or tetragonal pyramidal site and Ti-O distances are 1.92-1.87 Å; in moldavite, Ti occupies the 6-coordinated octahedral site and Ti-O distance is 2.00-1.96 Å. Formation of tektites is related to the impact process. It is generally recognized that tektites were formed under higher temperature and high pressure. But through this study, local structures of Ti are differing in three strewnfields and even different locations of the same strewnfield. What caused the various local structures will be another topic of tektite studies. Local structure of Ti may be changed in

  9. Spin-polarization properties and electronic structure of the ordered c(2 × 2) MnCu/Cu(1 1 0) surface alloy.

    PubMed

    Wang, C; Stojić, N; Binggeli, N

    2014-10-01

    The spin-ordering and electronic properties of the c(2 × 2) MnCu/Cu(1 1 0) surface alloy are investigated by means of ab initio density-functional calculations. We first address the magnetic ground state and the robustness of the spin-polarization properties. The lowest-energy state is found to be ferromagnetic with a very low Curie temperature, showing that the paramagnetic phase should be established in this system at room temperature. The calculated trends obtained for the various spin structures considered indicate that the local Mn-spin moment and resulting reduced work function as well as Mn-outward buckling should persist in the paramagnetic phase. We then address the electronic surface-band structure of the paramagnetic phase close to the Fermi energy, in connection with the interpretation of recent angle-resolved-photoemission-spectroscopy experiments at room temperature. Our calculations account for an intriguing new surface-band feature observed experimentally near the [Formula: see text] point upon alloy formation, and provide a microscopic interpretation for this feature and for the alloy-induced changes in the Cu(1 1 0) Shockley surface state. PMID:25158692

  10. Spin polarized low energy electron microscopy of quantum well resonances in Fe films on the Cu-covered W(110) surface.

    PubMed

    Wu, Qiang; Altman, M S

    2013-07-01

    Spin polarized low energy electron microscopy has been used to investigate the quantum size effect (QSE) in electron reflectivity from Fe films grown on a pseudomorphic Cu layer on a W(110) surface. Intensity oscillations caused by the QSE as functions of Fe film thickness and incident electron energy identify quantum well resonance conditions in the film. Evaluation of these intensity oscillations using the phase accumulation model provides information on the unoccupied spin polarized band structure in the Fe film above the vacuum level. We also find evidence that the presence of the non-magnetic Cu layer shifts spin polarized quantum well resonances in the Fe layer uniformly downward in energy by 1.1eV compared to Fe/W(110) films without an interface Cu layer, suggesting that the Cu layer gives a small degree of control over the quantum well resonances. PMID:23628648

  11. Sulfur K-edge X-ray absorption spectroscopy and time-dependent density functional theory of arsenic dithiocarbamates.

    PubMed

    Donahue, Courtney M; Pacheco, Juan S Lezama; Keith, Jason M; Daly, Scott R

    2014-06-28

    S K-edge X-ray absorption spectroscopy (XAS) and time-dependent density functional theory (TDDFT) calculations were performed on a series of As[S2CNR2]3 complexes, where R2 = Et2, (CH2)5 and Ph2, to determine how dithiocarbamate substituents attached to N affect As[S2CNR2]3 electronic structure. Complimentary [PPh4][S2CNR2] salts were also studied to compare dithiocarbamate bonding in the absence of As. The XAS results indicate that changing the orientation of the alkyl substituents from trans to cis (R2 = Et2vs. (CH2)5) yields subtle variations whereas differences associated with a change from alkyl to aryl are much more pronounced. For example, despite the differences in As 4p mixing, the first features in the S K-edge XAS spectra of [PPh4][S2CNPh2] and As[S2CNPh2]3 were both shifted by 0.3 eV compared to their alkyl-substituted derivatives. DFT calculations revealed that the unique shift observed for [PPh4][S2CNPh2] is due to phenyl-induced splitting of the π* orbitals delocalized over N, C and S. A similar phenomenon accounts for the shift observed for As[S2CNPh2]3, but the presence of two unique S environments (As-S and As···S) prevented reliable analysis of As-S covalency from the XAS data. In the absence of experimental values, DFT calculations revealed a decrease in As-S orbital mixing in As[S2CNPh2]3 that stems from a redistribution of electron density to S atoms participating in weaker As···S interactions. Simulated spectra obtained from TDDFT calculations reproduce the experimental differences in the S K-edge XAS data, which suggests that the theory is accurately modeling the experimental differences in As-S orbital mixing. The results highlight how S K-edge XAS and DFT can be used cooperatively to understand the electronic structure of low symmetry coordination complexes containing S atoms in different chemical environments. PMID:24811926

  12. Beyond muffin-tin model for theoretical analysis of As K-edge XANES of InAs

    NASA Astrophysics Data System (ADS)

    Smolentsev, Grigory; Soldatov, Alexander V.; Joly, Yves; Pascarelli, Sakura; Aquilanti, Guliana

    2006-11-01

    Three alternative approaches have been applied to calculate As K-edge XANES of InAs: multiple scattering (MS) theory, non-muffin-tin finite difference method (FDM) and full potential linearized augmented plane wave (FLAPW) method. Such combination allows to make the distinction between two types of non-muffin-tin effects. First, in the interstitial region the potential is not constant. Second, the covalent bonds increase the charge density between nearest atoms and lead to additional loss of spherical symmetry of the potential within MT spheres.

  13. K-edge Subtraction Angiography with Synchrotron X-Rays: Final Technical Report, (February 1, 1984 to January 31, 1987)

    DOE R&D Accomplishments Database

    Hofstadter, R.

    1987-09-01

    The aim was the development of an angiographic method and appropriate equipment for imaging with x-rays the coronary arteries in a non-invasive manner. Successive steps involved studies with phantoms, live animals and finally with human subjects. Clinical evaluation of human coronary arteries remains a goal of this and a continuing project, and steps along the way to such an achievement are in process. Transvenous injection of a dye using the method of iodine dichromography near 33.2 keV, the K-edge of iodine, forms the basis of the method

  14. Polar Kerr Effect Measurements of YBa_2Cu_3O_6+x: Evidence for Broken Symmetry Near the Pseudogap Temperature

    SciTech Connect

    Xia, Jing

    2011-08-24

    Polar Kerr effect in the high-Tc superconductor YBa{sub 2}Cu{sub 3}O{sub 6+x} was measured at zero magnetic field with high precision using a cyogenic Sagnac fiber interferometer. We observed non-zero Kerr rotations of order {approx} 1 {micro}rad appearing near the pseudogap temperature T*, and marking what appears to be a true phase transition. Anomalous magnetic behavior in magnetic-field training of the effect suggests that time reversal symmetry is already broken above room temperature.

  15. Mechanical, spin polarized electronic and magnetic properties of TmX(X = Cu, Ag): First principle study

    NASA Astrophysics Data System (ADS)

    Chand, Satish; Singh, R. P.; Govindan, A.; Singh, S. K.

    2015-10-01

    To study the mechanical, spin polarized electronic and magnetic behavior of TmX(X = Cu, Ag), full-potential linear augmented plane wave plus local orbital method has been used. The lattice parameter (a0), bulk modulus (B0) and its first-order pressure derivative (B0') have been calculated using optimization method. Mechanical properties have been studied in terms of elastic constants (Cij), Young's modulus (Y), shear modulus (G) and Poisson's ratio (v) at ambient temperature and pressure which are found to be consistent with available experimental/theoretical values. Electronic properties have been investigated in terms of band structure and density of state histograms for spin up and spin down channel. Electronic and magnetic behavior of TmX shows that studied materials are metallic ferromagnets with high spin polarization in which Tm-f state electrons are contributed mainly.

  16. Microstructure and anodic polarization behavior of experimental Ag-18Cu-15Pd-12Au alloy in aqueous sulfide solution.

    PubMed

    Endo, Kazuhiko; Ohno, Hiroki; Asakura, Shukuji

    2003-05-01

    The anodic corrosion behavior of an experimental Ag-15Pd-18Cu-12Au alloy in 0.1% Na(2)S solution in relation to its microstructure was investigated using potentiodynamic and potentiostatic polarization techniques with analyses of corrosion products by X-ray diffractometry, Auger electron spectroscopy, and X-ray photoelectron spectroscopy. The role of Pd in improvement of the corrosion resistance was also investigated. In the potential/current density curve, three distinct current peaks, at -520 mV (peak I), -425 mV (peak II) and -175 mV (peak III), were observed. The Ag-rich alpha(2) matrix with coarse Cu and Pd-rich lamellae was the most corrosion-susceptible region, and this region was preferentially corroded at peak I with the formation of granular deposits of Ag(2)S. A small amount of Ag-Cu mixed sulfide deposited on the Cu and Pd-rich coarse particles and dissolution of Ag as AgO(-) might have occurred in parallel with Ag(2)S formation at peak II. Enrichment of Pd on the alloy surface occurred at peak III due to preferential dissolution of Ag and Cu. A high level of corrosion resistance was attained with the formation of a thin Pd-rich sulfide film, which enhanced the passivity of the alloy in an alkaline sulfide solution. It was found that passivity is an important phenomenon not only for base metal alloys but also for noble metal alloys to maintain high levels of resistance to corrosion and tarnishing in sulfide environments. PMID:15348446

  17. C K-edge NEXAFS spectra of graphene with physical and chemical defects: a study based on density functional theory.

    PubMed

    Ehlert, Christopher; Unger, Wolfgang E S; Saalfrank, Peter

    2014-07-21

    Recently, C K-edge Near Edge X-ray Absorption Fine Structure (NEXAFS) spectra of graphite (HOPG) surfaces have been measured for the pristine material, and for HOPG treated with either bromine or krypton plasmas (Lippitz et al., Surf. Sci., 2013, 611, L1). Changes of the NEXAFS spectra characteristic for physical (krypton) and/or chemical/physical modifications of the surface (bromine) upon plasma treatment were observed. Their molecular origin, however, remained elusive. In this work we study by density functional theory, the effects of selected point and line defects as well as chemical modifications on NEXAFS carbon K-edge spectra of single graphene layers. For Br-treated surfaces, also Br 3d X-ray Photoelectron Spectra (XPS) are simulated by a cluster approach, to identify possible chemical modifications. We observe that some of the defects related to plasma treatment lead to characteristic changes of NEXAFS spectra, similar to those in experiment. Theory provides possible microscopic origins for these changes. PMID:24901898

  18. Long-Range Chemical Sensitivity in the Sulfur K-Edge X-ray Absorption Spectra of Substituted Thiophenes

    PubMed Central

    2015-01-01

    Thiophenes are the simplest aromatic sulfur-containing compounds and are stable and widespread in fossil fuels. Regulation of sulfur levels in fuels and emissions has become and continues to be ever more stringent as part of governments’ efforts to address negative environmental impacts of sulfur dioxide. In turn, more effective removal methods are continually being sought. In a chemical sense, thiophenes are somewhat obdurate and hence their removal from fossil fuels poses problems for the industrial chemist. Sulfur K-edge X-ray absorption spectroscopy provides key information on thiophenic components in fuels. Here we present a systematic study of the spectroscopic sensitivity to chemical modifications of the thiophene system. We conclude that while the utility of sulfur K-edge X-ray absorption spectra in understanding the chemical composition of sulfur-containing fossil fuels has already been demonstrated, care must be exercised in interpreting these spectra because the assumption of an invariant spectrum for thiophenic forms may not always be valid. PMID:25116792

  19. Near-coincident K-line and K-edge energies as ionization diagnostics for some high atomic number plasmas

    SciTech Connect

    Pereira, N. R.; Weber, B. V.; Phipps, D. G.; Schumer, J. W.; Seely, J. F.; Carroll, J. J.; Vanhoy, J. R.; Slabkowska, K.; Polasik, M.

    2012-10-15

    For some high atomic number atoms, the energy of the K-edge is tens of eVs higher than the K-line energy of another atom, so that a few eV increase in the line's energy results in a decreasing transmission of the x-ray through a filter of the matching material. The transmission of cold iridium's Asymptotically-Equal-To 63.287 keV K{alpha}{sub 2} line through a lutetium filter is 7% lower when emitted by ionized iridium, consistent with an energy increase of {Delta}{epsilon} Asymptotically-Equal-To 10{+-}1 eV associated with the ionization. Likewise, the transmission of the K{beta}{sub 1} line of ytterbium through a near-coincident K-edge filter changes depending on plasma parameters that should affect the ionization. Systematic exploration of filter-line pairs like these could become a unique tool for diagnostics of suitable high energy density plasmas.

  20. Structure of Alkali Borate Glasses at High Pressure: B and Li K-Edge Inelastic X-Ray Scattering Study

    SciTech Connect

    Lee, Sung Keun; Eng, Peter J.; Mao, Ho-kwang; Meng, Yue; Shu, Jinfu

    2008-06-16

    We report the first in situ boron K-edge inelastic x-ray scattering (IXS) spectra for alkali borate glasses (Li{sub 2}B{sub 4}O{sub 7}) at high pressure up to 30 GPa where pressure-induced coordination transformation from three-coordinated to four-coordinated boron was directly probed. Coordination transformation (reversible upon decompression) begins around 5 GPa and the fraction of four-coordinated boron increases with pressure from about 50% (at 1 atm) to more than 95% (at 30 GPa) with multiple densification mechanisms, evidenced by three distinct pressure ranges for (d{sup [4]}B/dP){sub T}. The lithium K-edge IXS spectrum for Li-borate glasses at 5 GPa shows IXS features similar to that at 1 atm, suggesting that the Li environment does not change much with pressure up to 5 GPa. These results provide improved understanding of the structure of low-z glass at high pressure.

  1. Nitrogen K-edge XANES - an overview of reference compounds used to identify unknown organic nitrogen in environmental samples.

    PubMed

    Leinweber, Peter; Kruse, Jens; Walley, Fran L; Gillespie, Adam; Eckhardt, Kai Uwe; Blyth, Robert I R; Regier, Tom

    2007-11-01

    The chemical nature of soil organic nitrogen (N) is still poorly understood and one-third to one-half of it is typically classified as ;unknown N'. Nitrogen K-edge XANES spectroscopy has been used to develop a systematic overview on spectral features of all major N functions in soil and environmental samples. The absolute calibration of the photon energy was completed using the 1s --> pi* transitions of pure gas-phase N(2). On this basis a library of spectral features is provided for mineral N, nitro N, amino acids, peptides, and substituted pyrroles, pyridines, imidazoles, pyrazoles, pyrazines, pyrimidines and purine bases. Although N XANES was previously considered ;non-destructive', effects of radiation damage were shown for two compound classes and an approach was proposed to minimize it. This new evidence is integrated into a proposal for the evaluation spectra from environmental samples with unknown composition. Thus a basis is laid to develop N K-edge XANES as a complementary standard research method to study the molecular composition and ecological functions of ;unknown N' in soil and the environment. PMID:17960033

  2. Optimizing experimental design, overcoming challenges, and gaining valuable information from the Sb K-edge XANES region

    SciTech Connect

    Fawcett, Skya E.; Gordon, Robert A.; Jamieson, Heather E.

    2009-10-05

    There are many challenges associated with collecting, processing, and interpreting high-energy XAS data. The most significant of these are broad spectra, minimal separation of edge positions, and high background owing to the Compton tail. Studies of the Sb system are a particular challenge owing to its complex bonding character and formation of mixed oxidation-state minerals. Furthermore, in environmental samples such as stream sediment containing mine waste, different Sb phases may coexist. Ways to overcome these challenges and achieve accurate and useful information are presented. Our investigations used Sb K-edge X-ray absorption near-edge spectroscopy (XANES) to elucidate Sb geochemical behavior. Several Sb mineral spectra are presented, including Sb sulfosalts, and contrasted based on the different hosting and coordination environments around the Sb atom in the crystal structure. These comparisons lead to the recognition of how the different hosting and coordination environments are manifested in the shape of the Sb mineral spectra. In fact from the shape of the spectra, the occupation of the Sb atom in a single or in multiple crystallographic sites, regardless of whether multiple phases are present in the sample, is discernible. Furthermore, we demonstrate that quantitative information can be derived from the XANES region using linear combination fitting of the derivative spectra, rather than the energy spectra. Particularly useful to the advancement of Sb research is the demonstration that a significant amount of information can be gained from the Sb K-edge XANES region.

  3. Ni K-Edge XAS Suggests that Coordination of Ni II to the Unstructured Amyloidogenice Region of the Human Prion Protein Produces a Ni2 bis-u-hydroxo Dimer

    SciTech Connect

    Shearer,J.; Soh, P.

    2007-01-01

    Prion diseases are thought to be caused by the misfolding of the ubiquitous neuronal membrane prion protein (PrP) through an unknown mechanism that may involve Cu{sup II} coordination to the PrP. Previous work has utilized Ni{sup II} as a diamagnetic probe for Cu{sup II} coordination [C.E. Jones, M. Klewpatinond, S.R. Abdelraheim, D.R. Brown, J.H. Viles, J. Mol. Biol. 346 (2005) 1393-1407]. Herein we investigate Ni{sup II} coordination to the PrP fragment PrP(93-114) (AcN-GGTHSQWNKPSKPKTNMKHMAG) at pH = 10.0 by Ni K-edge X-ray absorption spectroscopy (XAS). We find that two equivalents of Ni{sup II} will coordinate to PrP(93-114) by UV/Vis titrations and mass spectrometry. Ni K-edge XAS data is consistent with Ni{sup II} ligated by five N/O based ligands (three N/O ligands at 2.01(2) {angstrom} and two at 1.855(2) {angstrom}). We were also able to locate a Ni-Ni vector at 3.1(1) {angstrom}, which suggests the two Ni{sup II} centers are contained in a bis-{mu}-hydroxo dimer. We therefore suggest that Ni{sup II} may not be a suitable diamagnetic mimic for Cu{sup II} coordination within the PrP since differential coordination modes for the two metals exist.

  4. High-sensitivity determination of Zn(II) and Cu(II) in vitro by fluorescence polarization

    NASA Astrophysics Data System (ADS)

    Thompson, Richard B.; Maliwal, Badri P.; Feliccia, Vincent; Fierke, Carol A.

    1998-04-01

    Recent work has suggested that free Cu(II) may play a role in syndromes such as Crohn's and Wilson's diseases, as well as being a pollutant toxic at low levels to shellfish and sheep. Similarly, Zn(II) has been implicated in some neural damage in the brain resulting from epilepsy and ischemia. Several high sensitivity methods exist for determining these ions in solution, including GFAAS, ICP-MS, ICP-ES, and electrochemical techniques. However, these techniques are generally slow and costly, require pretreatment of the sample, require complex instruments and skilled personnel, and are incapable of imaging at the cellular and subcellular level. To address these shortcomings we developed fluorescence polarization (anisotropy) biosensing methods for these ions which are very sensitivity, highly selective, require simple instrumentation and little pretreatment, and are inexpensive. Thus free Cu(II) or Zn(II) can be determined at picomolar levels by changes in fluorescence polarization, lifetime, or wavelength ratio using these methods; these techniques may be adapted to microscopy.

  5. Reducing radiation dose by application of optimized low-energy x-ray filters to K-edge imaging with a photon counting detector

    NASA Astrophysics Data System (ADS)

    Choi, Yu-Na; Lee, Seungwan; Kim, Hee-Joung

    2016-01-01

    K-edge imaging with photon counting x-ray detectors (PCXDs) can improve image quality compared with conventional energy integrating detectors. However, low-energy x-ray photons below the K-edge absorption energy of a target material do not contribute to image formation in the K-edge imaging and are likely to be completely absorbed by an object. In this study, we applied x-ray filters to the K-edge imaging with a PCXD based on cadmium zinc telluride for reducing radiation dose induced by low-energy x-ray photons. We used aluminum (Al) filters with different thicknesses as the low-energy x-ray filters and implemented the iodine K-edge imaging with an energy bin of 34-48 keV at the tube voltages of 50, 70 and 90 kVp. The effects of the low-energy x-ray filters on the K-edge imaging were investigated with respect to signal-difference-to-noise ratio (SDNR), entrance surface air kerma (ESAK) and figure of merit (FOM). The highest value of SDNR was observed in the K-edge imaging with a 2 mm Al filter, and the SDNR decreased as a function of the filter thicknesses. Compared to the K-edge imaging with a 2 mm Al filter, the ESAK was reduced by 66%, 48% and 39% in the K-edge imaging with a 12 mm Al filter for 50 kVp, 70 kVp and 90 kVp, respectively. The FOM values, which took into account the ESAK and SDNR, were maximized for 8, 6 to 8 and 4 mm Al filters at 50 kVp, 70 kVp and 90 kVp, respectively. We concluded that the use of an optimal low-energy filter thickness, which was determined by maximizing the FOM, could significantly reduce radiation dose while maintaining image quality in the K-edge imaging with the PCXD.

  6. Reducing radiation dose by application of optimized low-energy x-ray filters to K-edge imaging with a photon counting detector.

    PubMed

    Choi, Yu-Na; Lee, Seungwan; Kim, Hee-Joung

    2016-01-21

    K-edge imaging with photon counting x-ray detectors (PCXDs) can improve image quality compared with conventional energy integrating detectors. However, low-energy x-ray photons below the K-edge absorption energy of a target material do not contribute to image formation in the K-edge imaging and are likely to be completely absorbed by an object. In this study, we applied x-ray filters to the K-edge imaging with a PCXD based on cadmium zinc telluride for reducing radiation dose induced by low-energy x-ray photons. We used aluminum (Al) filters with different thicknesses as the low-energy x-ray filters and implemented the iodine K-edge imaging with an energy bin of 34-48 keV at the tube voltages of 50, 70 and 90 kVp. The effects of the low-energy x-ray filters on the K-edge imaging were investigated with respect to signal-difference-to-noise ratio (SDNR), entrance surface air kerma (ESAK) and figure of merit (FOM). The highest value of SDNR was observed in the K-edge imaging with a 2 mm Al filter, and the SDNR decreased as a function of the filter thicknesses. Compared to the K-edge imaging with a 2 mm Al filter, the ESAK was reduced by 66%, 48% and 39% in the K-edge imaging with a 12 mm Al filter for 50 kVp, 70 kVp and 90 kVp, respectively. The FOM values, which took into account the ESAK and SDNR, were maximized for 8, 6 to 8 and 4 mm Al filters at 50 kVp, 70 kVp and 90 kVp, respectively. We concluded that the use of an optimal low-energy filter thickness, which was determined by maximizing the FOM, could significantly reduce radiation dose while maintaining image quality in the K-edge imaging with the PCXD. PMID:26733235

  7. Ca and S K-edge XANES studies of calcite-acid mine water interactions

    SciTech Connect

    Myneni, S.C.B.; Perera, R.C.C.

    1997-04-01

    Heavy metal-rich acidic waters (SO{sub 4}{sup 2{minus}}, AsO{sub 4}{sup 3{minus}}, SeO{sub 4}{sup 2{minus}}, Fe{sup 2+}, Fe{sup 3+}, Al{sup 3+}, Cu{sup 2+}, Zn{sup 2+}, Cd{sup 2+}) and related ochreous coatings are common around abandoned sulfide and coal mine sites. This is mainly caused by the natural weathering of pyrite (FeS{sub 2}), arsenopyrite (FeAsS), and other metal sulfide containing shales. Acid generation in the case of pyrite can be explained by a general reaction: FeS{sub 2} + 3.5 O{sub 2} + H{sub 2}O {leftrightarrow} Fe{sup 2+} + SO{sub 4}{sup 2{minus}} + 2H{sup +}. Also, these low pH waters interact with the soils, and mobilize their soluble elements. One of the common remediation strategies is to allow these acid waters to react with limestone (CaCO{sub 3}-rich rock) and neutralize the pH and precipitate out soluble metals. Yet, the associated problem is the precipitation of Fe and Al oxides and hydroxy sulfate coatings on limestone surfaces, which block calcite reactive sites, and make them ineffective a few hours after initiation of treatment. The main objectives of this research are to examine: (1) the chemistry of limestone surface coatings, and (2) their toxic metal uptake and the conditions that inhibit their formation. Previous molecular studies using X-ray diffraction, and vibrational spectroscopy on limestone surface coatings (sampled from Athens, OH) indicate that the surface-most layer (the layer in contact with water) is composed of schwertmannite (Fe(III)-hydroxy sulfate) like phases. However, white, X-ray amorphous; Al-, sulfate- and carbonate-rich; and Ca-poor phases appeared at the interface between the limestone and the iron oxide coatings. The structure, morphology, and coordination chemistry of component major and trace elements of these white precipitate phases have not previously been examined.

  8. Carbon K-Edge Scanning Transmission X-ray Spectromicroscopy (STXM) of Uranium Binding to Bacterial Cells

    NASA Astrophysics Data System (ADS)

    Gillow, J.; Wirick, S.; Feser, M.; Jacobsen, C.; Francis, A.

    2002-12-01

    The sorption of uranium by bacteria was studied by interrogation of the C K-absorption edge using scanning transmission x-ray spectromicroscopy (STXM). The unique imaging and spectroscopy capability of STXM was used to elucidate the chemical environment of C in the bacterial cell. Washed whole cells and cell wall preparations of bacteria commonly found in soil environments including Pseudomonas fluorescens, Bacillus subtilis, the facultative anaerobe Shewanella putrefaciens and the strict anaerobe Clostridium sp. were exposed to uranyl nitrate at pH 5. After washing to remove potential surface precipitates and non-bonded uranium the cells and walls were dried onto TEM gridx. Standards (uranyl salts and organic complexes), bacterial cells unexposed, and U-exposed cells were analyzed by STXM at 280-310 eV with the C K-edge x-ray absorption near-edge spectroscopy (XANES) examined for evidence of U in the C coordination environment. Principle spectral features of the bacteria included the 285 eV C=C and 288 eV C=O 1s-π * resonances due to the major C function groups that comprise the bacterial cell wall. There was no change in peak position of 1s-π * spectral features for whole cells or cell walls when U was present. This indicates that U does not exert an influence on the electron resonance of C when bonded as carboxylate species at the bacterial cell surface. This finding is supported by the analysis of uranyl citrate and uranyl alanine standards. The extended x-ray absorption fine structure spectroscopy region of the C K-edge of bacterial cells exposed to U shows slight changes in spectral features at >290 eV. Other absorption edges accessible by soft x-ray spectroscopy were examined; U was detected at it's NV (736.2 eV) and NIV (778.3 eV) edges however there was poor resolution of U associated with the bacteria. Analysis at the O K-edge (529 eV) provided evidence for metal-ligand interaction and forms the basis for further study to gain a molecular

  9. Polarity driven morphology of CeO2(1 0 0) islands on Cu(1 1 1)

    NASA Astrophysics Data System (ADS)

    Stetsovych, O.; Beran, J.; Dvořák, F.; Mašek, K.; Mysliveček, J.; Matolín, V.

    2013-11-01

    Thin ceria films supported by metal substrates represent important model systems for reactivity studies in heterogeneous catalysis. Here we report the growth study of the polar CeO2(1 0 0) phase as part of a mixed CeO2(1 1 1)-CeO2(1 0 0) thin film supported by Cu(1 1 1). The two ceria phases grow on different areas of the substrate, what allows a reliable growth characterization of the CeO2(1 0 0) islands on Cu(1 1 1). Scanning tunneling microscopy measurements reveal CeO2(1 0 0) to grow in the form of highly dispersed three dimensional (3D) islands on a CeO2(1 0 0) interfacial layer. The CeO2(1 0 0) islands exhibit a 2 × 2 surface reconstruction. The presence of the surface reconstruction together with the highly dispersed growth of CeO2(1 0 0) islands corresponds to the requirement for compensation of the surface dipole moment on the CeO2(1 0 0). CeO2(1 0 0) islands are further characterized by reflection high energy electron diffraction yielding their epitaxial relations with respect to the Cu(1 1 1) substrate. The growth of well characterized CeO2(1 0 0) islands supported by Cu(1 1 1) represents a starting point for developing a novel template for structure-related reactivity studies of ceria based model catalysts.

  10. Quantum Monte Carlo for the x-ray absorption spectrum of pyrrole at the nitrogen K-edge

    SciTech Connect

    Zubarev, Dmitry Yu.; Austin, Brian M.; Lester, William A. Jr.

    2012-04-14

    Fixed-node diffusion Monte Carlo (FNDMC) is used to simulate the x-ray absorption spectrum of a gas-phase pyrrole molecule at the nitrogen K-edge. Trial wave functions for core-excited states are constructed from ground-state Kohn-Sham determinants substituted with singly occupied natural orbitals from configuration interaction with single excitations calculations of the five lowest valence-excited triplet states. The FNDMC ionization potential (IP) is found to lie within 0.3 eV of the experimental value of 406.1 {+-} 0.1 eV. The transition energies to anti-bonding virtual orbitals match the experimental spectrum after alignment of IP values and agree with the existing assignments.

  11. Vulcanization reaction of squalene and S8 powder studied by Sulfur K-edge NEXAFS under liquid phase

    NASA Astrophysics Data System (ADS)

    Yagi, S.; Menjo, Y.; Tsukada, C.; Ogawa, S.; Kutluk, G.; Namatame, H.; Taniguchi, M.

    2015-03-01

    Vulcanized rubber materials are useful in our surroundings. However, detail structure and reaction are not revealed even in present. Since squalene molecule possesses some same properties compared with natural rubber, we have prepared the samples of vulcanized squalene at 140 °C for several hours. To understand the vulcanization reaction,sulfur K-edge NEXAFS measurements have been carried out for the vulcanized squalene under liquid phase with He-path system and fluorescence detection mode. Moreover, we have tried curve fitting analysis of NEXAFS spectra. The results indicate that the squalene has been vulcanized by the S8 molecule at 140 °C and the S8 molecule length is shortened from 8 to 5-6 after the vulcanization reaction.

  12. K-edge photoabsorption cross section in metal oxides: Effect of vacancies in TiOx and VOx

    NASA Astrophysics Data System (ADS)

    Kutzler, F. W.; Ellis, D. E.

    1984-06-01

    The x-ray K-edge photoabsorption cross sections for TiO and VO have been calculated, with the use of the self-consistent one-electron local-density theory. Energy levels, charge distribution, and cross sections were obtained from a 27-atom "microcrystal," with a molecular-cluster approach in the discrete-variational method. A detailed comparison is made with experimental spectra for VOx; features of theory and experiment are in good agreement if one assumes a relaxation of the nearest-neighbor oxygen atoms for the O-vacancy cluster. Bound-to-bound transitions are found to contribute significantly to the near-edge structure for the defect crystal.

  13. Oxygen K-edge fine structures of water by x-ray Raman scattering spectroscopy under pressure conditions

    SciTech Connect

    Fukui, Hiroshi; Huotari, Simo; Andrault, Denis; Kawamoto, Tatsuhiko

    2007-10-07

    Fine structure of the oxygen K edge was investigated for water at ambient pressure, 0.16, 0.21, 0.27, 0.47, and 0.60 GPa using x-ray Raman scattering spectroscopy (XRS). Similarity in near-edge structures at 0.16 and 0.60 GPa suggests little difference in the electronic state of oxygen in the low-pressure and high-pressure forms of water. Yet, we observed significant variation of preedge structure of the XRS spectra with compression. The intensity of the preedge peak at 535.7 eV has a minimal value at around 0.3 GPa, indicating that the number of hydrogen bonding increases first and then decreases as a function of pressure.

  14. Automated Chemical Analysis of Internally Mixed Aerosol Particles Using X-ray Spectromicroscopy at the Carbon K-Edge

    SciTech Connect

    Gilles, Mary K; Moffet, R.C.; Henn, T.; Laskin, A.

    2011-01-20

    We have developed an automated data analysis method for atmospheric particles using scanning transmission X-ray microscopy coupled with near edge X-ray fine structure spectroscopy (STXM/NEXAFS). This method is applied to complex internally mixed submicrometer particles containing organic and inorganic material. Several algorithms were developed to exploit NEXAFS spectral features in the energy range from 278 to 320 eV for quantitative mapping of the spatial distribution of elemental carbon, organic carbon, potassium, and noncarbonaceous elements in particles of mixed composition. This energy range encompasses the carbon K-edge and potassium L2 and L3 edges. STXM/NEXAFS maps of different chemical components were complemented with a subsequent analysis using elemental maps obtained by scanning electron microscopy coupled with energy dispersive X-ray analysis (SEM/EDX). We demonstrate the application of the automated mapping algorithms for data analysis and the statistical classification of particles.

  15. Theory and X-ray Absorption Spectroscopy for Aluminum Coordination Complexes – Al K-Edge Studies of Charge and Bonding in (BDI)Al, (BDI)AlR2, and (BDI)AlX2 Complexes.

    PubMed

    Altman, Alison B; Pemmaraju, C D; Camp, Clément; Arnold, John; Minasian, Stefan G; Prendergast, David; Shuh, David K; Tyliszczak, Tolek

    2015-08-19

    Polarized aluminum K-edge X-ray absorption near edge structure (XANES) spectroscopy and first-principles calculations were used to probe electronic structure in a series of (BDI)Al, (BDI)AlX2, and (BDI)AlR2 coordination compounds (X = F, Cl, I; R = H, Me; BDI = 2,6-diisopropylphenyl-β-diketiminate). Spectral interpretations were guided by examination of the calculated transition energies and polarization-dependent oscillator strengths, which agreed well with the XANES spectroscopy measurements. Pre-edge features were assigned to transitions associated with the Al 3p orbitals involved in metal-ligand bonding. Qualitative trends in Al 1s core energy and valence orbital occupation were established through a systematic comparison of excited states derived from Al 3p orbitals with similar symmetries in a molecular orbital framework. These trends suggested that the higher transition energies observed for (BDI)AlX2 systems with more electronegative X(1-) ligands could be ascribed to a decrease in electron density around the aluminum atom, which causes an increase in the attractive potential of the Al nucleus and concomitant increase in the binding energy of the Al 1s core orbitals. For (BDI)Al and (BDI)AlH2 the experimental Al K-edge XANES spectra and spectra calculated using the eXcited electron and Core-Hole (XCH) approach had nearly identical energies for transitions to final state orbitals of similar composition and symmetry. These results implied that the charge distributions about the aluminum atoms in (BDI)Al and (BDI)AlH2 are similar relative to the (BDI)AlX2 and (BDI)AlMe2 compounds, despite having different formal oxidation states of +1 and +3, respectively. However, (BDI)Al was unique in that it exhibited a low-energy feature that was attributed to transitions into a low-lying p-orbital of b1 symmetry that is localized on Al and orthogonal to the (BDI)Al plane. The presence of this low-energy unoccupied molecular orbital on electron-rich (BDI)Al distinguishes

  16. Absolute determination of charge-coupled device quantum detection efficiency using Si K-edge x-ray absorption fine structure

    SciTech Connect

    Dunn, J; Steel, A B

    2012-05-06

    We report a method to determine the quantum detection efficiency and the absorbing layers on a front-illuminated charge-coupled device (CCD). The CCD under study, as part of a crystal spectrometer, measures intense continuum x-ray emission from a picosecond laser-produced plasma and spectrally resolves the Si K-edge x-ray absorption fine structure features due to the electrode gate structure of the device. The CCD response across the Si K-edge shows a large discontinuity as well as a number of oscillations that are identified individually and uniquely from Si, SiO{sub 2}, and Si{sub 3}N{sub 4} layers. From the spectral analysis of the structure and K-edge discontinuity, the active layer thickness and the different absorbing layers thickness can be determined precisely. A precise CCD detection model from 0.2-10 keV can be deduced from this highly sensitive technique.

  17. Asymptotically-Equal-To 10 eV ionization shift in Ir K{alpha}{sub 2} from a near-coincident Lu K-edge

    SciTech Connect

    Pereira, N. R.; Weber, B. V.; Phipps, D.; Schumer, J. W.; Seely, J. F.; Carroll, J. J.; VanHoy, J. R.; Slabkowska, K.; Polasik, M.

    2012-10-15

    Close to an x-ray filter's K-edge the transmission depends strongly on the photon energy. For a few atom pairs, the K-edge of one is only a few tens of eV higher than a K-line energy of another, so that a small change in the line's energy becomes a measurable change in intensity behind such a matching filter. Lutetium's K-edge is Asymptotically-Equal-To 27 eV above iridium's K{alpha}{sub 2} line, Asymptotically-Equal-To 63.287 keV for cold Ir. A Lu filter reduces this line's intensity by Asymptotically-Equal-To 10 % when it is emitted by a plasma, indicating an ionization shift {Delta}E Asymptotically-Equal-To 10{+-}1 eV.

  18. Characterization of Darai Limestone Composition and Porosity Using Data-Constrained Modeling and Comparison with Xenon K-Edge Subtraction Imaging.

    PubMed

    Mayo, Sheridan C; Yang, Sam Y S; Pervukhina, Marina; Clennell, Michael B; Esteban, Lionel; Irvine, Sarah C; Siu, Karen K; Maksimenko, Anton S; Tulloh, Andrew M

    2015-08-01

    Data-constrained modeling is a method that enables three-dimensional distribution of mineral phases and porosity in a sample to be modeled based on micro-computed tomography scans acquired at different X-ray energies. Here we describe an alternative method for measuring porosity, synchrotron K-edge subtraction using xenon gas as a contrast agent. Results from both methods applied to the same Darai limestone sample are compared. Reasonable agreement between the two methods and with other porosity measurements is obtained. The possibility of a combination of data-constrained modeling and K-edge subtraction methods for more accurate sample characterization is discussed. PMID:26021343

  19. Energy distribution measurement of narrow-band ultrashort x-ray beams via K-edge filters subtraction

    SciTech Connect

    Cardarelli, Paolo; Di Domenico, Giovanni; Marziani, Michele; Mucollari, Irena; Pupillo, Gaia; Sisini, Francesco; Taibi, Angelo; Gambaccini, Mauro

    2012-10-01

    The characterization of novel x-ray sources includes the measurement of the photon flux and the energy distribution of the produced beam. The aim of BEATS2 experiment at the SPARC-LAB facility of the INFN National Laboratories of Frascati (Rome, Italy) is to investigate possible medical applications of an x-ray source based on Thomson relativistic back-scattering. This source is expected to produce a pulsed quasi-monochromatic x-ray beam with an instantaneous flux of 10{sup 20} ph/s in pulses 10 ps long and with an average energy of about 20 keV. A direct measurement of energy distribution of this beam is very difficult with traditional detectors because of the extremely high photon flux. In this paper, we present a method for the evaluation of the energy distribution of quasi-monochromatic x-ray beams based on beam filtration with K-edge absorbing foils in the energy range of interest (16-22 keV). The technique was tested measuring the energy distribution of an x-ray beam having a spectrum similar to the expected one (SPARC-LAB Thomson source) by using a tungsten anode x-ray tube properly filtered and powered. The energy distribution obtained has been compared with the one measured with a HPGe detector showing very good agreement.

  20. Ca L2,3-edge XANES and Sr K-edge EXAFS study of hydroxyapatite and fossil bone apatite.

    PubMed

    Zougrou, I M; Katsikini, M; Brzhezinskaya, M; Pinakidou, F; Papadopoulou, L; Tsoukala, E; Paloura, E C

    2016-08-01

    Upon burial, the organic and inorganic components of hard tissues such as bone, teeth, and tusks are subjected to various alterations as a result of interactions with the chemical milieu of soil, groundwater, and presence of microorganisms. In this study, simulation of the Ca L 2,3-edge X-ray absorption near edge structure (XANES) spectrum of hydroxyapatite, using the CTM4XAS code, reveals that the different symmetry of the two nonequivalent Ca(1) and Ca(2) sites in the unit cell gives rise to specific spectral features. Moreover, Ca L 2,3-edge XANES spectroscopy is applied in order to assess variations in fossil bone apatite crystallinity due to heavy bacterial alteration and catastrophic mineral dissolution, compared to well-preserved fossil apatite, fresh bone, and geologic apatite reference samples. Fossilization-induced chemical alterations are investigated by means of Ca L 2,3-edge XANES and scanning electron microscopy (SEM) and are related to histological evaluation using optical microscopy images. Finally, the variations in the bonding environment of Sr and its preference for substitution in the Ca(1) or Ca(2) sites upon increasing the Sr/Ca ratio is assessed by Sr K-edge extended X-ray absorption fine structure (EXAFS) spectroscopy. PMID:27379398

  1. X-ray spectra from a cerium target and their application to cone beam K-edge angiography

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Yamadera, Akira; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Ito, Fumihito; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi; Onagawa, Jun; Ido, Hideaki

    2005-09-01

    The cerium-target x-ray tube is useful for performing cone beam K-edge angiography, because K-series characteristic x-rays from the cerium target are absorbed effectively by iodine-based contrast media. The x-ray generator consists of a main controller and a unit with a high-voltage circuit and a fixed anode x-ray tube. The tube is a glass-enclosed diode with a cerium target and a 0.5-mm-thick beryllium window. The maximum tube voltage and current are 65 kV and 0.4 mA, respectively, and the focal-spot sizes are 1.3×0.9 mm. Cerium K-series characteristic x-rays are left, using a 3.0-mm-thick aluminum filter, and the x-ray intensity is 19.9 μGy/s at 1.0 m from the source with a tube voltage of 60 kV and a current of 0.40 mA. Angiography is performed with a computed radiography system using iodine-based microspheres 15 μm in diameter. In angiography of nonliving animals, we observe fine blood vessels of approximately 100 μm with high contrasts.

  2. High-speed K-edge angiography achieved with tantalum K-series characteristic x rays (Honorable Mention Poster Award)

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi; Ido, Hideaki

    2005-04-01

    The tantalum plasma flash x-ray generator is useful in order to perform high-speed K-edge angiography using cone beams because Kα rays from the tantalum target are absorbed effectively by gadolinium-based contrast media. In the flash x-ray generator, a 150 nF condenser is charged up to 80 kV by a power supply, and flash x rays are produced by the discharging. The x-ray tube is a demountable diode, and the turbomolecular pump evacuates air from the tube with a pressure of approximately 1 mPa. Since the electric circuit of the high-voltage pulse generator employs a cable transmission line, the high-voltage pulse generator produces twice the potential of the condenser charging voltage. When the charging voltage was increased, the K-series characteristic x-ray intensities of tantalum increased. The K lines were clean and intense, and hardly any bremsstrahlung rays were detected. The x-ray pulse widths were approximately 100 ns, and the time-integrated x-ray intensity had a value of approximately 300 μGy at 1.0 m from the x-ray source with a charging voltage of 80 kV. Angiography was performed using a film-less computed radiography (CR) system and gadolinium-based contrast media. In angiography of non-living animals, we observed fine blood vessels of approximately 100 μm with high contrasts.

  3. Ca L2,3-edge XANES and Sr K-edge EXAFS study of hydroxyapatite and fossil bone apatite

    NASA Astrophysics Data System (ADS)

    Zougrou, I. M.; Katsikini, M.; Brzhezinskaya, M.; Pinakidou, F.; Papadopoulou, L.; Tsoukala, E.; Paloura, E. C.

    2016-08-01

    Upon burial, the organic and inorganic components of hard tissues such as bone, teeth, and tusks are subjected to various alterations as a result of interactions with the chemical milieu of soil, groundwater, and presence of microorganisms. In this study, simulation of the Ca L 2,3-edge X-ray absorption near edge structure (XANES) spectrum of hydroxyapatite, using the CTM4XAS code, reveals that the different symmetry of the two nonequivalent Ca(1) and Ca(2) sites in the unit cell gives rise to specific spectral features. Moreover, Ca L 2,3-edge XANES spectroscopy is applied in order to assess variations in fossil bone apatite crystallinity due to heavy bacterial alteration and catastrophic mineral dissolution, compared to well-preserved fossil apatite, fresh bone, and geologic apatite reference samples. Fossilization-induced chemical alterations are investigated by means of Ca L 2,3-edge XANES and scanning electron microscopy (SEM) and are related to histological evaluation using optical microscopy images. Finally, the variations in the bonding environment of Sr and its preference for substitution in the Ca(1) or Ca(2) sites upon increasing the Sr/Ca ratio is assessed by Sr K-edge extended X-ray absorption fine structure (EXAFS) spectroscopy.

  4. High-resolution molybdenum K-edge X-ray absorption spectroscopy analyzed with time-dependent density functional theory.

    PubMed

    Lima, Frederico A; Bjornsson, Ragnar; Weyhermüller, Thomas; Chandrasekaran, Perumalreddy; Glatzel, Pieter; Neese, Frank; DeBeer, Serena

    2013-12-28

    X-ray absorption spectroscopy (XAS) is a widely used experimental technique capable of selectively probing the local structure around an absorbing atomic species in molecules and materials. When applied to heavy elements, however, the quantitative interpretation can be challenging due to the intrinsic spectral broadening arising from the decrease in the core-hole lifetime. In this work we have used high-energy resolution fluorescence detected XAS (HERFD-XAS) to investigate a series of molybdenum complexes. The sharper spectral features obtained by HERFD-XAS measurements enable a clear assignment of the features present in the pre-edge region. Time-dependent density functional theory (TDDFT) has been previously shown to predict K-pre-edge XAS spectra of first row transition metal compounds with a reasonable degree of accuracy. Here we extend this approach to molybdenum K-edge HERFD-XAS and present the necessary calibration. Modern pure and hybrid functionals are utilized and relativistic effects are accounted for using either the Zeroth Order Regular Approximation (ZORA) or the second order Douglas-Kroll-Hess (DKH2) scalar relativistic approximations. We have found that both the predicted energies and intensities are in excellent agreement with experiment, independent of the functional used. The model chosen to account for relativistic effects also has little impact on the calculated spectra. This study provides an important calibration set for future applications of molybdenum HERFD-XAS to complex catalytic systems. PMID:24197060

  5. Optimum design of multi-layer K-edge filter and multi-stage detectors for triple energy bone densitometer

    NASA Astrophysics Data System (ADS)

    Mazoochi, Alireza; Rahmani, Faezeh; Abbasi Davani, Fereydoun; Ghaderi, Ruhollah

    2014-03-01

    Dual X-ray bone densitometry may cause some errors in diagnosis due to heterogeneous distribution of adipose tissue. It is necessary to develop a more accurate technique to consider the effects of fat. In this research, a triple energy X-ray method has been introduced and conceptual design of a system consisting of 160 kV X-ray tube, multi-layer K-edge filter and multi-stage detector has been presented. Design calculations have been performed using MCNP4C Monte Carlo code to select the type of filters and detectors with the best thicknesses for better distinguishing materials. The energy peaks (37 keV, 50 keV and 105 keV) can be separated optimally with a multi-layer filter composed of barium (170 μm) and gadolinium (100 μm) as the first and second layers, respectively which are coated on a 1 mm aluminum plate placed between the source and tissue. The transmitted photons have been counted by a multi-stage linear array of detectors consisting of ZnSe(Te) and CsI(Tl) with 400 μm and 5 mm thicknesses, respectively. Monte Carlo simulations show that the triple energy X-ray technique has better accuracy than that of the standard dual energy X-ray technique.

  6. Sulfur K-edge XANES spectroscopy as a tool for understanding sulfur chemical state in anaerobic granular sludge

    NASA Astrophysics Data System (ADS)

    van Hullebusch, E.; Rossano, S.; Farges, F.; Lenz, M.; Labanowski, J.; Lagarde, P.; Flank, A.-M.; Lens, P.

    2009-11-01

    Sulfur is an essential biological element, yet its biochemistry in anaerobic biofilm is poorly understood because there are few tools for studying this element in biological systems. X-ray absorption spectroscopy provides a unique approach to determining the chemical speciation of sulfur in intact biological samples. When treating sulfate containing wastewaters in full scale up-flow anaerobic sludge bed bioreactors, microbial activity forms biofilms, consisting of a complex mixture of cells and associated extracellular substances as well as undefined inorganic precipitates. In addition to the anaerobic sludges, a large variety of model compounds of S (esp. sulfides) were investigated to find consistencies in the XANES that were used to model each "valence state" of S. The results confirmed that attributing a specific valence to most sulfides is impossible as we measured a continuum of edge shifts from sulfur "-2" to "-1", depending on the electronic structure of S in the probed sulfides. In the sludges, various sulfur hot spots were probed for speciation, despite photo-reduction was sometimes a problem. First, we index the main features of complex K-edge XANES spectra for S2--type units and sulfate units. Organic sulfur compounds were also shown to contribute significantly to the sulfur species present in some anaerobic granular sludge.

  7. PMMA interlayer-modulated memory effects by space charge polarization in resistive switching based on CuSCN-nanopyramids/ZnO-nanorods p-n heterojunction.

    PubMed

    Cheng, Baochang; Zhao, Jie; Xiao, Li; Cai, Qiangsheng; Guo, Rui; Xiao, Yanhe; Lei, Shuijin

    2015-01-01

    Resistive switching (RS) devices are commonly believed as a promising candidate for next generation nonvolatile resistance random access memory. Here, polymethylmethacrylate (PMMA) interlayer was introduced at the heterointerface of p-CuSCN hollow nanopyramid arrays and n-ZnO nanorod arrays, resulting in a typical bipolar RS behavior. We propose the mechanism of nanostructure trap-induced space charge polarization modulated by PMMA interlayer. At low reverse bias, PMMA insulator can block charges through the heterointerface, and V(-)Cu and V(+)o trapped states are respectively created on both sides of PMMA, resulting in a high resistance state (HRS) due to wider depletion region. At high reverse bias, however, electrons and holes can cross PMMA interlayer by Fowler-Nordeim tunneling due to a massive tilt of energy band, and then inject into the traps of ZnO and CuSCN, respectively. V(+)Cu and V(-)O trapped states are created, resulting in the formation of degenerate semiconductors on both sides of PMMA. Therefore, quantum tunneling and space charge polarization lead to a low resistance state (LRS). At relatively high forward bias, subsequently, the trapped states of V(-)Cu and V(+)o are recreated due to the opposite injection of charges, resulting in a recovery of HRS. The introduction of insulating interlayer at heterointerface, point a way to develop next-generation nonvolatile memories. PMID:26648249

  8. SU-C-207-06: In Vivo Quantification of Gold Nanoparticles Using K-Edge Imaging Via Spectrum Shaping by Gold Filter

    SciTech Connect

    Chen, H; Cormack, R; Bhagwat, M; Berbeco, R

    2015-06-15

    Purpose: Gold nanoparticles (AuNP) are multifunctional platforms ideal for drug delivery, targeted imaging and radiosensitization. We have investigated quantitative imaging of AuNPs using on board imager (OBI) cone beam computed tomography (CBCT). To this end, we also present, for the first time, a novel method for k-edge imaging of AuNP by filter-based spectral shaping. Methods: We used a digital 25 cm diameter water phantom, embedded with 3 cm spheres filled with AuNPs of different concentrations (0 mg/ml – 16 mg/ml). A poly-energetic X-ray spectrum of 140 kVp from a conventional X-ray tube is shaped by balanced K-edge filters to create an excess of photons right above the K-edge of gold at 80.7 keV. The filters consist of gold, tin, copper and aluminum foils. The phantom with appropriately assigned attenuation coefficients is forward projected onto a detector for each energy bin and then integrated. FKD reconstruction is performed on the integrated projections. Scatter, detector efficiency and noise are included. Results: We found that subtracting the results of two filter sets (Filter A:127 µm gold foil with 254 µm tin, 330 µm copper and 1 mm aluminum, and Filter B: 635 µm tin with 264 µm copper and 1 mm aluminum), provides substantial image contrast. The resulting filtered spectra match well below 80.7 keV, while maintaining sufficient X-ray quanta just above that. Voxel intensities of AuNP containing spheres increase linearly with AuNP concentration. K-edge imaging provides 18% more sensitivity than the tin filter alone, and 38% more sensitivity than the gold filter alone. Conclusion: We have shown that it is feasible to quantitatively detect AuNP distributions in a patient-sized phantom using clinical CBCT and K-edge spectral shaping.

  9. Calibration of scalar relativistic density functional theory for the calculation of sulfur K-edge X-ray absorption spectra.

    PubMed

    Debeer George, Serena; Neese, Frank

    2010-02-15

    Sulfur K-edge X-ray absorption spectroscopy has been proven to be a powerful tool for investigating the electronic structures of sulfur-containing coordination complexes. The full information content of the spectra can be developed through a combination of experiment and time-dependent density functional theory (TD-DFT). In this work, the necessary calibration is carried out for a range of contemporary functionals (BP86, PBE, OLYP, OPBE, B3LYP, PBE0, TPSSh) in a scalar relativistic (0(th) order regular approximation, ZORA) DFT framework. It is shown that with recently developed segmented all-electron scalar relativistic (SARC) basis sets one obtains results that are as good as with large, uncontracted basis sets. The errors in the calibrated transition energies are on the order of 0.1 eV. The error in calibrated intensities is slightly larger, but the calculations are still in excellent agreement with experiment. The behavior of full TD-DFT linear response versus the Tamm-Dancoff approximation has been evaluated with the result that two methods are almost indistinguishable. The inclusion of relativistic effects barely changes the results for first row transition metal complexes, however, the contributions become visible for second-row transition metals and reach a maximum (of an approximately 10% change in the calibration parameters) for third row transition metal species. The protocol developed here is approximately 10 times more efficient than the previously employed protocol, which was based on large, uncontracted basis sets. The calibration strategy followed here may be readily extended to other edges. PMID:20092349

  10. Development of a K-edge micro CT for the study of tumor angiogenesis in small animals

    NASA Astrophysics Data System (ADS)

    Baldazzi, G.; Bollini, D.; Gambaccini, M.; Golfieri, R.; Lollini, P. L.; Margotti, A.; Masetti, S.; Nicoletti, G.; Pancaldi, G.; Roma, L.; Rossi, P. L.; Zuffa, M.

    2006-03-01

    A new micro scanner CT for small animals - based on a couple of parallel quasi-monochromatic X-ray beams with different energies selectable - is under development. The aim of the study is the in vivo imaging of the tumor neo-angiogenesis pattern in an earlier diagnostic phase and the analysis of cancer growth and metastasis development in different tumor types on mice. As previously demonstrated1, the imaging system based on dual energy quasi- monochromatic X-ray beams provides higher sensitivity in detecting low concentrations of iodine contrast medium if compared to traditional polychromatic X-ray equipment. The K-edge dual energy radiology is a realistic candidate to recognize tumor neo- angiogenesis process in a very earlier stage, in which conventional systems are very poor in sensitivity. Moreover, the capability to select the energy of quasi-monochromatic beams enables the use of the Multi-Energy Quasi-Monochromatic technique. Tuning properly the energies allows maximizing the difference between linear absorption coefficients of healthy and pathological tissues increasing the contrast of pathologies. In order to optimize the contrast with this technique, one should know the X-ray energy regions where the absorption of healthy and pathological tissues eventually differs and that for each type of tumor under study. For this reason, the systematic X-ray characterization of many types of healthy and neoplastic human and mice tissues is in progress. The goal of this work is to obtain a catalog of liner attenuation coefficients of a variety of pathological tissues for respect to the healthy ones, finding any energy windows of radiological differentiation. In this paper, the theoretical methods are presented with development works and preliminary results.

  11. Enhanced K-edge plasma angiography achieved with tungsten Kα rays utilizing gadolinium-based contrast media

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Hayasi, Yasuomi; Germer, Rudolf; Kimura, Koji; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi; Ido, Hideaki

    2005-08-01

    The tungsten plasma flash x-ray generator is useful in order to perform high-speed enhanced K-edge angiography using cone beams because Kα rays from the tungsten target are absorbed effectively by gadolinium-based contrast media. In the flash x-ray generator, a 150 nF condenser is charged up to 80 kV by a power supply, and flash x-rays are produced by the discharging. The x-ray tube is a demountable diode, and the turbomolecular pump evacuates air from the tube with a pressure of approximately 1 mPa. Since the electric circuit of the high-voltage pulse generator employs a cable transmission line, the high-voltage pulse generator produces twice the potential of the condenser charging voltage. At a charging voltage of 80 kV, the estimated maximum tube voltage and current were approximately 160 kV and 40 kA, respectively. When the charging voltage was increased, the characteristic x-ray intensities of tungsten Kα lines increased. Using an ytterbium oxide filter, the Kα lines were clean, and hardly any Kβ lines and bremsstrahlung rays were detected. The x-ray pulse widths were approximately 60 ns, and the time-integrated x-ray intensity had a value of approximately 50 μGy at 1.0 m from the x-ray source with a charging voltage of 80 kV. Angiography was performed using a film-less computed radiography system and gadolinium-based contrast media. In angiography of non-living animals, we observed fine blood vessels of approximately 100 μm with high contrasts.

  12. Enhanced k-edge angiography utilizing a superfluorescent x-ray generator with a gadolinium-target tube

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Germer, Rudolf; Obara, Haruo; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi

    2007-01-01

    The gadolinium plasma flash x-ray generator is useful for performing high-speed enhanced K-edge angiography using cone beams because K-series characteristic x-rays from the gadolinium target are absorbed effectively by iodine-based contrast media. In the flash x-ray generator, a 150 nF condenser is charged up to 80 kV by a power supply, and flash x-rays are produced by the discharging. The x-ray tube is a demountable cold-cathode diode, and the turbomolecular pump evacuates air from the tube with a pressure of approximately 1 mPa. Since the electric circuit of the high-voltage pulse generator employs a cable transmission line, the high-voltage pulse generator produces twice the potential of the condenser charging voltage. At a charging voltage of 80 kV, the estimated maximum tube voltage and current are approximately 160 kV and 40 kA, respectively. When the charging voltage was increased, the K-series characteristic x-ray intensities of gadolinium increased. Bremsstrahlung x-ray intensity rate decreased with increasing the charging voltage, and clean K lines were produced with a charging voltage of 80 kV. The x-ray pulse widths were approximately 100 ns, and the time-integrated x-ray intensity had a value of approximately 500 μGy at 1.0 m from the x-ray source with a charging voltage of 80 kV. Angiography was performed using a filmless computed radiography (CR) system and iodine-based contrast media. In the angiography of nonliving animals, we observed fine blood vessels of approximately 100 μm with high contrasts.

  13. K-edge angiography utilizing a tungsten plasma X-ray generator in conjunction with gadolinium-based contrast media

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Hayasi, Yasuomi; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi; Onagawa, Jun; Ido, Hideaki

    2006-11-01

    The tungsten plasma flash X-ray generator is useful in order to perform high-speed enhanced K-edge angiography using cone beams because K-series characteristic X-rays from the tungsten target are absorbed effectively by gadolinium-based contrast media. In the flash X-ray generator, a 150 nF condenser is charged up to 80 kV by a power supply, and flash X-rays are produced by the discharging. The X-ray tube is a demountable diode, and the turbomolecular pump evacuates air from the tube with a pressure of approximately 1 mPa. Since the electric circuit of the high-voltage pulse generator employs a cable transmission line, the high-voltage pulse generator produces twice the potential of the condenser charging voltage. At a charging voltage of 80 kV, the estimated maximum tube voltage and current were approximately 160 kV and 40 kA, respectively. When the charging voltage was increased, the characteristic X-ray intensities of tungsten K α lines increased. The K α lines were clean, and hardly any bremsstrahlung rays were detected. The X-ray pulse widths were approximately 110 ns, and the time-integrated X-ray intensity had a value of approximately 0.35 mGy at 1.0 m from the X-ray source with a charging voltage of 80 kV. Angiography was performed using a film-less computed radiography (CR) system and gadolinium-based contrast media. In angiography of non-living animals, we observed fine blood vessels of approximately 100 μm with high contrasts.

  14. Enhanced K-edge Angiography Utilizing Tantalum Plasma X-ray Generator in Conjunction with Gadolinium-Based Contrast Media

    NASA Astrophysics Data System (ADS)

    Sato, Eiichi; Hayasi, Yasuomi; Kimura, Koji; Tanaka, Etsuro; Mori, Hidezo; Kawai, Toshiaki; Inoue, Takashi; Ogawa, Akira; Sato, Shigehiro; Takayama, Kazuyoshi; Onagawa, Jun; Ido, Hideaki

    2005-12-01

    The tantalum plasma flash X-ray generator is useful for performing high-speed enhanced K-edge angiography using cone beams because K-series characteristic X-rays from the tantalum target are absorbed effectively by gadolinium-based contrast media. In the flash X-ray generator, a 150 nF condenser is charged up to 80 kV by a power supply, and flash X-rays are produced by the discharging. The X-ray tube is a demountable cold-cathode diode, and the turbomolecular pump evacuates air from the tube with a pressure of approximately 1 mPa. Since the electric circuit of the high-voltage pulse generator employs a cable transmission line, the high-voltage pulse generator produces twice the potential of the condenser charging voltage. At a charging voltage of 80 kV, the estimated maximum tube voltage and current were approximately 160 kV and 40 kA, respectively. When the charging voltage was increased, the K-series characteristic X-ray intensities of cerium increased. The K lines were clean and intense, and hardly any bremsstrahlung rays were detected. The X-ray pulse widths were approximately 100 ns, and the time-integrated X-ray intensity had a value of approximately 300 μGy at 1.0 m from the X-ray source with a charging voltage of 80 kV. Angiography was performed using a filmless computed radiography (CR) system and gadolinium-based contrast media. In the angiography of nonliving animals, we observed fine blood vessels of approximately 100 μm with high contrasts.

  15. Sulphur Speciation and Turnover in Soils: Evidence from Sulphur K-Edge XANES Spectroscopy and Isotope Dilution Studies

    SciTech Connect

    Zhao,F.; Lehmann, J.; Solomon, D.; Fox, M.; McGrath, S.

    2005-01-01

    Sulphur K-edge X-ray absorption near edge structure (XANES) spectroscopy was used to quantify S species in humic substance extracts from ten soils from the UK, China and New Zealand, which differ in land use and agricultural management. XANES spectroscopy showed the presence of most reduced (sulphides, disulphides, thiols and thiophenes), intermediate (sulphoxides and sulphonates) and highly oxidised S (ester sulphates) forms, with the three groups representing 14-32%, 33-50% and 22-53% of the organic S in the humic substance extracts, respectively. Land use had a profound influence on the relative proportions of S species. Well-drained arable soils generally had a higher proportion of organic S present in the most oxidised form than the grassland soils collected nearby, whereas paddy soils showed a more reduced profile due to episodic flooding. In the Broadbalk Classical Experiment at Rothamsted, reversion of an arable system to grassland or woodland in the 1880s resulted in an increase of the most reduced and intermediate S species at the expense of the most oxidised S species. Long-term applications of farmyard manure to an arable plot also shifted S species from the most oxidised to the intermediate and the most reduced species. Sulphur immobilization and gross mineralization were determined in seven soils using the {sup 35}S isotope dilution method. Gross mineralization during a 53-day incubation correlated more closely with the amounts of the most reduced and intermediate S species than with the most oxidised S species, suggesting that the former (C-bonded S) were the main source of organic S for mineralization in the short-term.

  16. Sulphur Speciation and Turnover in Soils: Evidence from Sulfur K-Edge XANES Spectroscopy and Isotope Dilution Studies

    SciTech Connect

    Zhao,F.; Lehmann, J.; Solomon, D.; Fox, M.; McGrath, S.

    2006-01-01

    Sulphur K-edge X-ray absorption near edge structure (XANES) spectroscopy was used to quantify S species in humic substance extracts from ten soils from the UK, China and New Zealand, which differ in land use and agricultural management. XANES spectroscopy showed the presence of most reduced (sulphides, disulphides, thiols and thiophenes), intermediate (sulphoxides and sulphonates) and highly oxidised S (ester sulphates) forms, with the three groups representing 14-32%, 33-50% and 22-53% of the organic S in the humic substance extracts, respectively. Land use had a profound influence on the relative proportions of S species. Well-drained arable soils generally had a higher proportion of organic S present in the most oxidised form than the grassland soils collected nearby, whereas paddy soils showed a more reduced profile due to episodic flooding. In the Broadbalk Classical Experiment at Rothamsted, reversion of an arable system to grassland or woodland in the 1880s resulted in an increase of the most reduced and intermediate S species at the expense of the most oxidised S species. Long-term applications of farmyard manure to an arable plot also shifted S species from the most oxidised to the intermediate and the most reduced species. Sulphur immobilisation and gross mineralisation were determined in seven soils using the {sup 35}S isotope dilution method. Gross mineralisation during a 53-day incubation correlated more closely with the amounts of the most reduced and intermediate S species than with the most oxidised S species, suggesting that the former (C-bonded S) were the main source of organic S for mineralisation in the short-term.

  17. High resolution short focal distance Bent Crystal Laue Analyzer for copper K edge x-ray absorption spectroscopy

    SciTech Connect

    Kujala, N. G.; Barrea, R. A.; Karanfil, C.

    2011-06-15

    We have developed a compact short focal distance Bent Crystal Laue Analyzer (BCLA) for Cu speciation studies of biological systems with specific applications to cancer biology. The system provides high energy resolution and high background rejection. The system is composed of an aluminum block serving as a log spiral bender for a 15 micron thick Silicon 111 crystal and a set of soller slits. The energy resolution of the BCLA--about 14 eV at the Cu K{alpha} line-- allows resolution of the Cu K{alpha}{sub 1} and CuK{alpha}{sub 2} lines. The system is easily aligned by using a set of motorized XYZ linear stages. Two operation modes are available: incident energy scans (IES) and emission energy scans (EES). IES allows scanning of the incident energy while the BCLA system is maintained at a preselected fixed position - typically CuK{alpha}{sub 1} line. EES is used when the incident energy is fixed and the analyzer is scanned to provide the peak profile of the emission lines of Cu.

  18. High resolution short focal distance Bent Crystal Laue Analyzer for copper K edge x-ray absorption spectroscopy

    PubMed Central

    Kujala, N. G.; Karanfil, C.; Barrea, R. A.

    2011-01-01

    We have developed a compact short focal distance Bent Crystal Laue Analyzer (BCLA) for Cu speciation studies of biological systems with specific applications to cancer biology. The system provides high energy resolution and high background rejection. The system is composed of an aluminum block serving as a log spiral bender for a 15 micron thick Silicon 111 crystal and a set of soller slits. The energy resolution of the BCLA—about 14 eV at the Cu Kα line— allows resolution of the Cu Kα1 and CuKα2 lines. The system is easily aligned by using a set of motorized XYZ linear stages. Two operation modes are available: incident energy scans (IES) and emission energy scans (EES). IES allows scanning of the incident energy while the BCLA system is maintained at a preselected fixed position—typically CuKα1 line. EES is used when the incident energy is fixed and the analyzer is scanned to provide the peak profile of the emission lines of Cu. PMID:21721673

  19. Incorrect DFT-GGA predictions of the stability of non-stoichiometric/polar dielectric surfaces: the case of Cu2O(111).

    PubMed

    Nilius, Niklas; Fedderwitz, Hanna; Groß, Boris; Noguera, Claudine; Goniakowski, Jacek

    2016-03-01

    Scanning tunneling microscopy (STM) and hybrid density functional theory (DFT) have been used to study the stability and electronic characteristics of the Cu2O(111) surface. We challenge previous interpretations of its structure and composition and show that only appropriate (hybrid) calculations can correctly account for the relative thermodynamic stability of stoichiometric versus Cu-deficient terminations. Our theoretical finding of the stoichiometric surface to be most stable at oxygen-lean conditions is confirmed by an excellent matching between STM spectroscopy data and the calculated surface electronic structure. Beyond the specific case of the Cu2O(111) surface, and beyond the known deficiencies of GGA-based approaches in the description of oxide electronic structures, our work highlights the risk of an erroneous evaluation of the surface stability, in cases where the energetics and electronic characteristics are strongly coupled, as in a wide class of polar and/or non-stoichiometric oxide surfaces. PMID:26876056

  20. Simulating Cl K-edge X-ray absorption spectroscopy in MCl62- (M= U, Np, Pu) complexes and UOCl5- using time-dependent density functional theory

    SciTech Connect

    Govind, Niranjan; De Jong, Wibe A.

    2014-02-21

    We report simulations of the X-ray absorption near edge structure (XANES) at the Cl K-edge of actinide hexahalides MCl62- (M = U, Np, Pu) and the UOCl5- complex using linear-response time-dependent density functional theory (LR-TDDFT) extended for core excitations. To the best of our knowledge, these are the first calculations of the Cl K-edge spectra of NpCl62- and PuCl62-. In addition, the spectra are simulated with and without the environmental effects of the host crystal as well as ab initio molecular dynamics (AIMD) to capture the dynamical effects due to atomic motion. The calculated spectra are compared with experimental results, where available and the observed trends are discussed.

  1. Nitrogen K-edge X-ray absorption near edge structure (XANES) spectra of purine-containing nucleotides in aqueous solution

    NASA Astrophysics Data System (ADS)

    Shimada, Hiroyuki; Fukao, Taishi; Minami, Hirotake; Ukai, Masatoshi; Fujii, Kentaro; Yokoya, Akinari; Fukuda, Yoshihiro; Saitoh, Yuji

    2014-08-01

    The N K-edge X-ray absorption near edge structure (XANES) spectra of the purine-containing nucleotide, guanosine 5'-monophosphate (GMP), in aqueous solution are measured under various pH conditions. The spectra show characteristic peaks, which originate from resonant excitations of N 1s electrons to π* orbitals inside the guanine moiety of GMP. The relative intensities of these peaks depend on the pH values of the solution. The pH dependence is explained by the core-level shift of N atoms at specific sites caused by protonation and deprotonation. The experimental spectra are compared with theoretical spectra calculated by using density functional theory for GMP and the other purine-containing nucleotides, adenosine 5'-monophosphate, and adenosine 5'-triphosphate. The N K-edge XANES spectra for all of these nucleotides are classified by the numbers of N atoms with particular chemical bonding characteristics in the purine moiety.

  2. Dynamical K Edge and Line Variations in the X-ray Spectrum of the Ultra-compact Binary 4U 0614+091

    NASA Astrophysics Data System (ADS)

    Schulz, N. S.; Nowak, M. A.; Chakrabarty, D.; Canizares, C. R.

    2010-12-01

    We observed the ultra-compact binary candidate 4U 0614+091 for a total of 200 ks with the high-energy transmission gratings on board the Chandra X-ray Observatory. The source is found at various intensity levels with spectral variations present. X-ray luminosities vary between 2.0 × 1036 erg s-1 and 3.5 × 1036 erg s-1. Continuum variations are present at all times and spectra can be fit well with a power-law component, a high kT blackbody component, and a broad line component near oxygen. The spectra require adjustments to the Ne K edge and in some occasions also to the Mg K edge. Once further resolved, the Ne K edge region appears variable in terms of optical depths and morphology. The edge vicinity reveals an average velocity smear of ~3500 km s-1 implying a characteristic radius of the order of <109 cm consistent with an ultra-compact binary nature. The variability proves that the excess is intrinsic to the source. The data seem to indicate excess column densities of up to several 1018 cm-2. However, there are some serious problems with an Ne I interpretation in ultra-compact disks and we need to consider alternative interpretations, which include a variable O VIII ionization edge, as likely candidates. We test such possibilities with existing observations. The prominent soft emission line complex near the O VIII Lyα position appears extremely broad and relativistic effects from near the innermost disk have to be included. Gravitationally broadened line fits also provide nearly edge-on angles of inclination consistent with the observed high dynamics near the Ne K edge. The emissions appear consistent with an ionized disk with ionization parameters of the order of 104 at radii of a few 107 cm. The line wavelengths with respect to O VIII Lyα are found variably blueshifted indicating more complex inner disk dynamics.

  3. In situ total-electron-yield sulfur K-edge XAFS measurements during exposure of copper to an SO 2-containing humid atmosphere

    NASA Astrophysics Data System (ADS)

    Song, Inho; Rickett, Brett; Janavicius, Paul; Payer, Joe H.; Antonio, Mark R.

    1995-02-01

    A total-electron-yield (TEY) detector was designed and constructed for in situ X-ray absorption fine structure (XAFS) measurements of the sulfur-containing species formed during exposure of copper to a humid atmosphere containing SO 2. Using the detector, gas phase XAFS spectra were also collected for both dry and humid SO 2 atmospheres. This work presents the experimental technique and examples of the sulfur K-edge spectra collected during the study.

  4. Reference spectra of important adsorbed organic and inorganic phosphate binding forms for soil P speciation using synchrotron-based K-edge XANES spectroscopy.

    PubMed

    Prietzel, Jörg; Harrington, Gertraud; Häusler, Werner; Heister, Katja; Werner, Florian; Klysubun, Wantana

    2016-03-01

    Direct speciation of soil phosphorus (P) by linear combination fitting (LCF) of P K-edge XANES spectra requires a standard set of spectra representing all major P species supposed to be present in the investigated soil. Here, available spectra of free- and cation-bound inositol hexakisphosphate (IHP), representing organic P, and of Fe, Al and Ca phosphate minerals are supplemented with spectra of adsorbed P binding forms. First, various soil constituents assumed to be potentially relevant for P sorption were compared with respect to their retention efficiency for orthophosphate and IHP at P levels typical for soils. Then, P K-edge XANES spectra for orthophosphate and IHP retained by the most relevant constituents were acquired. The spectra were compared with each other as well as with spectra of Ca, Al or Fe orthophosphate and IHP precipitates. Orthophosphate and IHP were retained particularly efficiently by ferrihydrite, boehmite, Al-saturated montmorillonite and Al-saturated soil organic matter (SOM), but far less efficiently by hematite, Ca-saturated montmorillonite and Ca-saturated SOM. P retention by dolomite was negligible. Calcite retained a large portion of the applied IHP, but no orthophosphate. The respective P K-edge XANES spectra of orthophosphate and IHP adsorbed to ferrihydrite, boehmite, Al-saturated montmorillonite and Al-saturated SOM differ from each other. They also are different from the spectra of amorphous FePO4, amorphous or crystalline AlPO4, Ca phosphates and free IHP. Inclusion of reference spectra of orthophosphate as well as IHP adsorbed to P-retaining soil minerals in addition to spectra of free or cation-bound IHP, AlPO4, FePO4 and Ca phosphate minerals in linear combination fitting exercises results in improved fit quality and a more realistic soil P speciation. A standard set of P K-edge XANES spectra of the most relevant adsorbed P binding forms in soils is presented. PMID:26917141

  5. Vibrationally resolved NEXAFS at C and N K-edges of pyridine, 2-fluoropyridine and 2,6-difluoropyridine: A combined experimental and theoretical assessment

    NASA Astrophysics Data System (ADS)

    Baiardi, Alberto; Mendolicchio, Marco; Barone, Vincenzo; Fronzoni, Giovanna; Cardenas Jimenez, Gustavo Adolfo; Stener, Mauro; Grazioli, Cesare; de Simone, Monica; Coreno, Marcello

    2015-11-01

    In the present work, the near edge X-ray absorption spectroscopy (NEXAFS) spectra at both C and N K-edges of pyridine, 2-fluoropyridine, and 2,6-difluoropyridine have been studied both experimentally and theoretically. From an electronic point of view, both transition potential density functional theory and time-dependent density functional theory approaches lead to reliable results provided that suitable basis sets and density functionals are employed. In this connection, the global hybrid B3LYP functional in conjunction with the EPR-III basis set appears particularly suitable after constant scaling of the band positions. For the N K-edge, vertical energies obtained at these levels and broadened by symmetric Gaussian distributions provide spectra in reasonable agreement with the experiment. Vibronic contributions further modulate the band-shapes leading to a better agreement with the experimental results, but are not strictly necessary for semi-quantitative investigations. On the other hand, vibronic contributions are responsible for strong intensity redistribution in the NEXAFS C K-edge spectra, and their inclusion is thus mandatory for a proper description of experiments. In this connection, the simple vertical gradient model is particularly appealing in view of its sufficient reliability and low computational cost. For more quantitative results, the more refined vertical Hessian approach can be employed, and its effectiveness has been improved thanks to a new least-squares fitting approach.

  6. In situ removal of carbon contamination from a chromium-coated mirror: ideal optics to suppress higher-order harmonics in the carbon K-edge region

    PubMed Central

    Toyoshima, Akio; Kikuchi, Takashi; Tanaka, Hirokazu; Mase, Kazuhiko; Amemiya, Kenta

    2015-01-01

    Carbon-free chromium-coated optics are ideal in the carbon K-edge region (280–330 eV) because the reflectivity of first-order light is larger than that of gold-coated optics while the second-order harmonics (560–660 eV) are significantly suppressed by chromium L-edge and oxygen K-edge absorption. Here, chromium-, gold- and nickel-coated mirrors have been adopted in the vacuum ultraviolet and soft X-ray branch beamline BL-13B at the Photon Factory in Tsukuba, Japan. Carbon contamination on the chromium-coated mirror was almost completely removed by exposure to oxygen at a pressure of 8 × 10−2 Pa for 1 h under irradiation of non-monochromated synchrotron radiation. The pressure in the chamber recovered to the order of 10−7 Pa within a few hours. The reflectivity of the chromium-coated mirror of the second-order harmonics in the carbon K-edge region (560–660 eV) was found to be a factor of 0.1–0.48 smaller than that of the gold-coated mirror. PMID:26524299

  7. Vibrationally resolved NEXAFS at C and N K-edges of pyridine, 2-fluoropyridine and 2,6-difluoropyridine: A combined experimental and theoretical assessment.

    PubMed

    Baiardi, Alberto; Mendolicchio, Marco; Barone, Vincenzo; Fronzoni, Giovanna; Cardenas Jimenez, Gustavo Adolfo; Stener, Mauro; Grazioli, Cesare; de Simone, Monica; Coreno, Marcello

    2015-11-28

    In the present work, the near edge X-ray absorption spectroscopy (NEXAFS) spectra at both C and N K-edges of pyridine, 2-fluoropyridine, and 2,6-difluoropyridine have been studied both experimentally and theoretically. From an electronic point of view, both transition potential density functional theory and time-dependent density functional theory approaches lead to reliable results provided that suitable basis sets and density functionals are employed. In this connection, the global hybrid B3LYP functional in conjunction with the EPR-III basis set appears particularly suitable after constant scaling of the band positions. For the N K-edge, vertical energies obtained at these levels and broadened by symmetric Gaussian distributions provide spectra in reasonable agreement with the experiment. Vibronic contributions further modulate the band-shapes leading to a better agreement with the experimental results, but are not strictly necessary for semi-quantitative investigations. On the other hand, vibronic contributions are responsible for strong intensity redistribution in the NEXAFS C K-edge spectra, and their inclusion is thus mandatory for a proper description of experiments. In this connection, the simple vertical gradient model is particularly appealing in view of its sufficient reliability and low computational cost. For more quantitative results, the more refined vertical Hessian approach can be employed, and its effectiveness has been improved thanks to a new least-squares fitting approach. PMID:26627945

  8. Quasi in situ Ni K-edge EXAFS investigation of the spent NiMo catalyst from ultra-deep hydrodesulfurization of gas oil in a commercial plant.

    PubMed

    Hamabe, Yusuke; Jung, Sungbong; Suzuki, Hikotaro; Koizumi, Naoto; Yamada, Muneyoshi

    2010-07-01

    Ni species on the spent NiMo catalyst from ultra-deep hydrodesulfurization of gas oil in a commercial plant were studied by Ni K-edge EXAFS and TEM measurement without contact of the catalysts with air. The Ni-Mo coordination shell related to the Ni-Mo-S phase was observed in the spent catalyst by quasi in situ Ni K-edge EXAFS measurement with a newly constructed high-pressure chamber. The coordination number of this shell was almost identical to that obtained by in situ Ni K-edge EXAFS measurement of the fresh catalyst sulfided at 1.1 MPa. On the other hand, large agglomerates of Ni(3)S(2) were observed only in the spent catalyst by quasi in situ TEM/EDX measurement. MoS(2)-like slabs were sintered slightly on the spent catalyst, where they were destacked to form monolayer slabs. These results suggest that the Ni-Mo-S phase is preserved on the spent catalyst and Ni(3)S(2) agglomerates are formed by sintering of Ni(3)S(2) species originally present on the fresh catalyst. PMID:20567086

  9. Vibrationally resolved NEXAFS at C and N K-edges of pyridine, 2-fluoropyridine and 2,6-difluoropyridine: A combined experimental and theoretical assessment

    SciTech Connect

    Baiardi, Alberto; Mendolicchio, Marco; Barone, Vincenzo; Fronzoni, Giovanna; Cardenas Jimenez, Gustavo Adolfo; Stener, Mauro; Grazioli, Cesare; Simone, Monica de; Coreno, Marcello

    2015-11-28

    In the present work, the near edge X-ray absorption spectroscopy (NEXAFS) spectra at both C and N K-edges of pyridine, 2-fluoropyridine, and 2,6-difluoropyridine have been studied both experimentally and theoretically. From an electronic point of view, both transition potential density functional theory and time-dependent density functional theory approaches lead to reliable results provided that suitable basis sets and density functionals are employed. In this connection, the global hybrid B3LYP functional in conjunction with the EPR-III basis set appears particularly suitable after constant scaling of the band positions. For the N K-edge, vertical energies obtained at these levels and broadened by symmetric Gaussian distributions provide spectra in reasonable agreement with the experiment. Vibronic contributions further modulate the band-shapes leading to a better agreement with the experimental results, but are not strictly necessary for semi-quantitative investigations. On the other hand, vibronic contributions are responsible for strong intensity redistribution in the NEXAFS C K-edge spectra, and their inclusion is thus mandatory for a proper description of experiments. In this connection, the simple vertical gradient model is particularly appealing in view of its sufficient reliability and low computational cost. For more quantitative results, the more refined vertical Hessian approach can be employed, and its effectiveness has been improved thanks to a new least-squares fitting approach.

  10. High resolution polarized Cu L3 XAS of high temperature superconductors: correlations between the symmetry of d holes and the critical temperature

    NASA Astrophysics Data System (ADS)

    Flank, A. M.; Lagarde, P.; Bianconi, A.; Castrucci, P.; Fabrizi, A.; Pompa, M.; Katayama-Yoshida, H.; Calestani, G.

    1990-06-01

    High resolution polarized Cu L3 X-ray absorption spectra of single crystals and of highly oriented pellets of high Tc superconductors of the bismuth kind have been measured by using synchrotron radiation at Super-ACO. We have investigated the energy splitting Δ between the in-plane and out-of-plane 2p → 3d transition. We find that the splitting Δ as well as the intensity of the Eparallelz component is correlated with the critical temperature of the superconducting systems for each class of superconductors.

  11. Auger electron and photoabsorption spectra of glycine in the vicinity of the oxygen K-edge measured with an X-FEL

    NASA Astrophysics Data System (ADS)

    Sanchez-Gonzalez, A.; Barillot, T. R.; Squibb, R. J.; Kolorenč, P.; Agaker, M.; Averbukh, V.; Bearpark, M. J.; Bostedt, C.; Bozek, J. D.; Bruce, S.; Carron Montero, S.; Coffee, R. N.; Cooper, B.; Cryan, J. P.; Dong, M.; Eland, J. H. D.; Fang, L.; Fukuzawa, H.; Guehr, M.; Ilchen, M.; Johnsson, A. S.; Liekhus-S, C.; Marinelli, A.; Maxwell, T.; Motomura, K.; Mucke, M.; Natan, A.; Osipov, T.; Östlin, C.; Pernpointner, M.; Petrovic, V. S.; Robb, M. A.; Sathe, C.; Simpson, E. R.; Underwood, J. G.; Vacher, M.; Walke, D. J.; Wolf, T. J. A.; Zhaunerchyk, V.; Rubensson, J.-E.; Berrah, N.; Bucksbaum, P. H.; Ueda, K.; Feifel, R.; Frasinski, L. J.; Marangos, J. P.

    2015-12-01

    We report the first measurement of the near oxygen K-edge auger spectrum of the glycine molecule. Our work employed an x-ray free electron laser as the photon source operated with input photon energies tunable between 527 and 547 eV. Complete electron spectra were recorded at each photon energy in the tuning range, revealing resonant and non-resonant auger structures. Finally ab initio theoretical predictions are compared with the measured above the edge auger spectrum and an assignment of auger decay channels is performed.

  12. Ligand K-edge XAS, DFT, and TDDFT analysis of pincer linker variations in Rh(i) PNP complexes: reactivity insights from electronic structure.

    PubMed

    Lee, Kyounghoon; Wei, Haochuan; Blake, Anastasia V; Donahue, Courtney M; Keith, Jason M; Daly, Scott R

    2016-06-14

    Here we report P K-edge, Cl K-edge, and Rh L3-edge X-ray absorption spectroscopy (XAS) data for Rh[C5H3N-2,6-(XP(t)Bu2)2]Cl, where X = O ((tBu)PONOP; ) or CH2 ((tBu)PNP; ). Solid-state XAS data for and were compared to density functional theory (DFT) and time-dependent density functional theory (TDDFT) calculations to identify how changing the PNP pincer linker from O to CH2 affected electronic structure and bonding at Rh(i). Pronounced differences in XAS peak intensities and energies were observed. The P K-edge XAS data revealed a large increase in Rh 4dx(2)-y(2) and P 3p orbital-mixing (Rh-P σ*) in compared to , and pronounced transition energy variations reflected marked differences in orbital energies and compositions. By comparison, the Cl K-edge XAS data revealed only subtle differences in Rh-Cl covalency, although larger splitting between the Rh-Cl π* and σ* transitions was observed in . Analysis of the occupied MOs from DFT (HOMO, HOMO-1, HOMO-2, and HOMO-3) and comparison to the unoccupied MOs involved in XAS revealed a relatively uniform energy increase (ca. 0.3-0.5 eV) for all five 4d-derived molecular orbitals in Rh((tBu)PNP)Cl () compared to Rh((tBu)PONOP)Cl (). The energy shift was relatively invariant with respect to differences in orbital symmetry, bonding type (σ or π), and orbital mixing, which suggested that the increase could be attributed to electrostatic effects. The change in d-orbital energies are consistent with known reactivity differences of Rh((tBu)PONOP)(+) and Rh((tBu)PNP)(+) towards CO, H2, and CH2Cl2, and are explained here by considering how d-orbital energies affect covalent L → M σ bonding and M → L π backbonding. PMID:27216135

  13. Submicrometer hyperspectral X-ray imaging of heterogeneous rocks and geomaterials: applications at the Fe k-edge.

    PubMed

    De Andrade, Vincent; Susini, Jean; Salomé, Murielle; Beraldin, Olivier; Rigault, Cecile; Heymes, Thomas; Lewin, Eric; Vidal, Olivier

    2011-06-01

    Because of their complex genesis, rocks and geomaterials are commonly polycrystalline heterogeneous systems, with various scale-level chemical and structural heterogeneities. Like most other μ-analytical techniques relying on scanning instruments with pencil-beam, the X-ray absorption near edge structure (XANES) technique allows elemental oxidation states to be probed with high spatial resolution but suffers from long acquisition times, imposing practical limits on the field of view. Now, regions of interest of sample are generally several orders of magnitude larger than the beam size. Here, we show the potential of coupling XANES and full-field absorption radiographies with a large hard X-ray beam. Thanks to a new setup, which allows both the acquisition of a XANES image stack and the execution of polarization contrast imaging, 1 to 4 mega-pixel crystallographic orientations and Fe oxidation state mapping corrected from polarization effects are obtained in a couple of hours on polycrystalline materials with submicrometric resolution. The demonstration is first carried out on complex metamorphic rocks, where Fe(3+)/Fe(total) images reveal subtle redox variations within single mineralogical phases. A second application concerns a bentonite analogue considered for nuclear waste and CO(2) storage. Proportion mappings of finely mixed phases are extracted from hyperspectral data, imaging the spatial progress of reaction processes essential for the safety of such storage systems. PMID:21500858

  14. Formation of an SEI on a LiMn(2)O(4) Cathode during Room Temperature Charge-Discharge Cycling Studied by Soft X-Ray Absorption Spectroscopy at the Fluorine K-edge

    SciTech Connect

    Chung, K.Y.; Yang, X.; Yoon, W.-S.; Kim, K.-B.; Cho, B.-W.

    2011-11-01

    The solid electrolyte interface (SEI) formation on the surface of LiMn{sub 2}O{sub 4} electrodes during room temperature charge-discharge cycling was studied using soft X-ray absorption spectroscopy at the Fluorine (F) K-edge. LiMn{sub 2}O{sub 4} electrodes without any binder were prepared by electrostatic spray deposition to eliminate the signal originating from the PVDF binder in the F K-edge X-ray absorption spectra. The F K-edge absorption spectra show that the SEI layer forms at a very early stage of cycling. SEI growth takes place during discharge. In addition, LiF formation is accelerated if the discharge step follows a charge step. The F K-edge absorption spectra suggest that the major component of the SEI is LiF.

  15. PMMA interlayer-modulated memory effects by space charge polarization in resistive switching based on CuSCN-nanopyramids/ZnO-nanorods p-n heterojunction

    PubMed Central

    Cheng, Baochang; Zhao, Jie; Xiao, Li; Cai, Qiangsheng; Guo, Rui; Xiao, Yanhe; Lei, Shuijin

    2015-01-01

    Resistive switching (RS) devices are commonly believed as a promising candidate for next generation nonvolatile resistance random access memory. Here, polymethylmethacrylate (PMMA) interlayer was introduced at the heterointerface of p-CuSCN hollow nanopyramid arrays and n-ZnO nanorod arrays, resulting in a typical bipolar RS behavior. We propose the mechanism of nanostructure trap-induced space charge polarization modulated by PMMA interlayer. At low reverse bias, PMMA insulator can block charges through the heterointerface, and and trapped states are respectively created on both sides of PMMA, resulting in a high resistance state (HRS) due to wider depletion region. At high reverse bias, however, electrons and holes can cross PMMA interlayer by Fowler-Nordeim tunneling due to a massive tilt of energy band, and then inject into the traps of ZnO and CuSCN, respectively. and trapped states are created, resulting in the formation of degenerate semiconductors on both sides of PMMA. Therefore, quantum tunneling and space charge polarization lead to a low resistance state (LRS). At relatively high forward bias, subsequently, the trapped states of and are recreated due to the opposite injection of charges, resulting in a recovery of HRS. The introduction of insulating interlayer at heterointerface, point a way to develop next-generation nonvolatile memories. PMID:26648249

  16. Polarization-dependent infrared reflectivity study of Sr2.5Ca11.5Cu24O41 under pressure: Charge dynamics, charge distribution, and anisotropy

    DOE PAGESBeta

    Frank, S.; Huber, A.; Ammerahl, U.; Hücker, M.; Kuntscher, C. A.

    2014-12-18

    We present a polarization-dependent infrared reflectivity study of the spin-ladder compound Sr₂̣₅Ca₁₁̣₅Cu₂₄O₄₁ under pressure. The optical response is strongly anisotropic, with the highest reflectivity along the ladders/chains (E∥c) revealing a metallic character. For the polarization direction perpendicular to the ladder plane, an insulating behavior is observed. With increasing pressure the optical conductivity for E∥c shows a strong increase, which is most pronounced below 2000cm⁻¹. According to the spectral weight analysis of the E∥c optical conductivity the hole concentration in the ladders increases with increasing pressure and tends to saturate at high pressure. At ~7.5 GPa the number of holes permore » Cu atom in the ladders has increased by Δδ=0.09(±0.01), and the Cu valence in the ladders has reached the value +2.33. Thus, the optical data suggest that Sr₂̣₅Ca₁₁̣₅Cu₂₄O₄₁ remains electronically highly anisotropic up to high pressure, also at low temperatures.« less

  17. PMMA interlayer-modulated memory effects by space charge polarization in resistive switching based on CuSCN-nanopyramids/ZnO-nanorods p-n heterojunction

    NASA Astrophysics Data System (ADS)

    Cheng, Baochang; Zhao, Jie; Xiao, Li; Cai, Qiangsheng; Guo, Rui; Xiao, Yanhe; Lei, Shuijin

    2015-12-01

    Resistive switching (RS) devices are commonly believed as a promising candidate for next generation nonvolatile resistance random access memory. Here, polymethylmethacrylate (PMMA) interlayer was introduced at the heterointerface of p-CuSCN hollow nanopyramid arrays and n-ZnO nanorod arrays, resulting in a typical bipolar RS behavior. We propose the mechanism of nanostructure trap-induced space charge polarization modulated by PMMA interlayer. At low reverse bias, PMMA insulator can block charges through the heterointerface, and and trapped states are respectively created on both sides of PMMA, resulting in a high resistance state (HRS) due to wider depletion region. At high reverse bias, however, electrons and holes can cross PMMA interlayer by Fowler-Nordeim tunneling due to a massive tilt of energy band, and then inject into the traps of ZnO and CuSCN, respectively. and trapped states are created, resulting in the formation of degenerate semiconductors on both sides of PMMA. Therefore, quantum tunneling and space charge polarization lead to a low resistance state (LRS). At relatively high forward bias, subsequently, the trapped states of and are recreated due to the opposite injection of charges, resulting in a recovery of HRS. The introduction of insulating interlayer at heterointerface, point a way to develop next-generation nonvolatile memories.

  18. X-ray Absorption Spectroscopy at the Sulfur K-Edge: A New Tool to Investigate the Biochemical Mechanisms of Neurodegeneration

    PubMed Central

    2012-01-01

    Sulfur containing molecules such as thiols, disulfides, sulfoxides, sulfonic acids, and sulfates may contribute to neurodegenerative processes. However, previous study in this field has been limited by the lack of in situ analytical techniques. This limitation may now be largely overcome following the development of synchrotron radiation X-ray absorption spectroscopy at the sulfur K-edge, which has been validated as a novel tool to investigate and image the speciation of sulfur in situ. In this investigation, we build the foundation required for future application of this technique to study and image the speciation of sulfur in situ within brain tissue. This study has determined the effect of sample preparation and fixation methods on the speciation of sulfur in thin sections of rat brain tissue, determined the speciation of sulfur within specific brain regions (brain stem and cerebellum), and identified sulfur specific markers of peroxidative stress following metal catalyzed reactive oxygen species production. X-ray absorption spectroscopy at the sulfur K-edge is now poised for an exciting new range of applications to study thiol redox, methionine oxidation, and the role of taurine and sulfatides during neurodegeneration. PMID:22860187

  19. Femtosecond probing around the K-edge of a laser heated plasma using X-rays from betatron oscillations in a laser wakefield accelerator

    NASA Astrophysics Data System (ADS)

    Behm, Keegan; Zhao, Tony; Maksimchuk, Anatoly; Yanovsky, Victor; Nees, John; Mangles, Stuart; Krushelnick, Karl; Thomas, Alexander; CenterUltrafast Optical Science Team; Plasmas Group Team

    2015-11-01

    Presented here are data from a two-beam pump-probe experiment. We used synchrotron-like X-rays created by betatron oscillations to probe a thin metal foil that is pumped by the secondary laser beam. The Hercules Ti:Sapph laser facility was operated with a pulse duration of 34 fs and a power of 65 TW split to drive a laser wakefield accelerator and heat the secondary target. We observed opacity changes around the K-edge of thin foils as they were heated by an ultrafast pump laser. To understand how the opacity is changing with heating and expansion of the plasma, the delay between the two laser paths was adjusted on a fs and ps time scale. Experimental data for polyvinylidene chloride (PVDC) and aluminum show variations in opacity around the Cl and Al K-edges with changes in the probe delay. The transmitted synchrotron-like spectrum was measured using single photon counting on an X-ray CCD camera and was available on a shot-by-shot basis. The success of this work demonstrates a practical application for X-rays produced from betatron oscillations in a wakefield accelerator. The compact size of these ``table-top'' accelerators and the ultrashort nature of the generated X-ray pulses allows pump-probe experiments that can probe events that occur on the femtosecond time scale.

  20. Local disorder investigation in NiS(2-x)Se(x) using Raman and Ni K-edge x-ray absorption spectroscopies.

    PubMed

    Marini, C; Joseph, B; Caramazza, S; Capitani, F; Bendele, M; Mitrano, M; Chermisi, D; Mangialardo, S; Pal, B; Goyal, M; Iadecola, A; Mathon, O; Pascarelli, S; Sarma, D D; Postorino, P

    2014-11-12

    We report on Raman and Ni K-edge x-ray absorption investigations of a NiS(2-x)Se(x) (with x = 0.00, 0.50/0.55, 0.60, and 1.20) pyrite family. The Ni K-edge absorption edge shows a systematic shift going from an insulating phase (x = 0.00 and 0.50) to a metallic phase (x = 0.60 and 1.20). The near-edge absorption features show a clear evolution with Se doping. The extended x-ray absorption fine structure data reveal the evolution of the local structure with Se doping which mainly governs the local disorder. We also describe the decomposition of the NiS(2-x)Se(x) Raman spectra and investigate the weights of various phonon modes using Gaussian and Lorentzian profiles. The effectiveness of the fitting models in describing the data is evaluated by means of Bayes factor estimation. The Raman analysis clearly demonstrates the disorder effects due to Se alloying in describing the phonon spectra of NiS(2-x)Se(x) pyrites. PMID:25320052

  1. Electronic defect states at the LaAlO3/SrTiO3 heterointerface revealed by O K-edge X-ray absorption spectroscopy.

    PubMed

    Palina, Natalia; Annadi, Anil; Asmara, Teguh Citra; Diao, Caozheng; Yu, Xiaojiang; Breese, Mark B H; Venkatesan, T; Ariando; Rusydi, Andrivo

    2016-05-18

    Interfaces of two dissimilar complex oxides exhibit exotic physical properties that are absent in their parent compounds. Of particular interest is insulating LaAlO3 films on an insulating SrTiO3 substrate, where transport measurements have shown a metal-insulator transition as a function of LaAlO3 thickness. Their origin has become the subject of intense research, yet a unifying consensus remains elusive. Here, we report evidence for the electronic reconstruction in both insulating and conducting LaAlO3/SrTiO3 heterointerfaces revealed by O K-edge X-ray absorption spectroscopy. For the insulating samples, the O K-edge XAS spectrum exhibits features characteristic of electronically active point defects identified as noninteger valence states of Ti. For conducting samples, a new shape-resonance at ∼540.5 eV, characteristic of molecular-like oxygen (empty O-2p band), is observed. This implies that the concentration of electronic defects has increased in proportion with LaAlO3 thickness. For larger defect concentrations, the electronic defect states are no longer localized at the Ti orbitals and exhibit pronounced O 2p-O 2p character. Our results demonstrate that, above a critical thickness, the delocalization of O 2p electronic states can be linked to the presence of oxygen vacancies and is responsible for the enhancement of conductivity at the oxide heterointerfaces. PMID:27146607

  2. Local disorder investigation in NiS2-xSex using Raman and Ni K-edge x-ray absorption spectroscopies

    NASA Astrophysics Data System (ADS)

    Marini, C.; Joseph, B.; Caramazza, S.; Capitani, F.; Bendele, M.; Mitrano, M.; Chermisi, D.; Mangialardo, S.; Pal, B.; Goyal, M.; Iadecola, A.; Mathon, O.; Pascarelli, S.; Sarma, D. D.; Postorino, P.

    2014-11-01

    We report on Raman and Ni K-edge x-ray absorption investigations of a NiS2-xSex (with x = 0.00, 0.50/0.55, 0.60, and 1.20) pyrite family. The Ni K-edge absorption edge shows a systematic shift going from an insulating phase (x = 0.00 and 0.50) to a metallic phase (x = 0.60 and 1.20). The near-edge absorption features show a clear evolution with Se doping. The extended x-ray absorption fine structure data reveal the evolution of the local structure with Se doping which mainly governs the local disorder. We also describe the decomposition of the NiS2-xSex Raman spectra and investigate the weights of various phonon modes using Gaussian and Lorentzian profiles. The effectiveness of the fitting models in describing the data is evaluated by means of Bayes factor estimation. The Raman analysis clearly demonstrates the disorder effects due to Se alloying in describing the phonon spectra of NiS2-xSex pyrites.

  3. Effect of x-ray energy dispersion in digital subtraction imaging at the iodine K-edge--A Monte Carlo study

    SciTech Connect

    Prino, F.; Ceballos, C.; Cabal, A.; Sarnelli, A.; Gambaccini, M.; Ramello, L.

    2008-01-15

    The effect of the energy dispersion of a quasi-monochromatic x-ray beam on the performance of a dual-energy x-ray imaging system is studied by means of Monte Carlo simulations using MCNPX (Monte Carlo N-Particle eXtended) version 2.6.0. In particular, the case of subtraction imaging at the iodine K-edge, suitable for angiographic imaging application, is investigated. The average energies of the two beams bracketing the iodine K-edge are set to the values of 31.2 and 35.6 keV corresponding to the ones obtained with a compact source based on a conventional x-ray tube and a mosaic crystal monochromator. The energy dispersion of the two beams is varied between 0 and 10 keV of full width at half-maximum (FWHM). The signal and signal-to-noise ratio produced in the simulated images by iodine-filled cavities (simulating patient vessels) drilled in a PMMA phantom are studied as a function of the x-ray energy dispersion. The obtained results show that, for the considered energy separation of 4.4 keV, no dramatic deterioration of the image quality is observed with increasing x-ray energy dispersion up to a FWHM of about 2.35 keV. The case of different beam energies is also investigated by means of fast simulations of the phantom absorption.

  4. Formations of hydroxyapatite and inositol hexakisphosphate in poultry litter during the composting period: sequential fractionation, P K-edge XANES and solution (31)P NMR investigations.

    PubMed

    Hashimoto, Yohey; Takamoto, Akira; Kikkawa, Ren; Murakami, Keiichi; Yamaguchi, Noriko

    2014-05-20

    Little is known about how the solubility and chemical speciation of phosphorus (P) in poultry litters are altered during the composting period. This study investigated the quantitative and qualitative changes in organic P (Po) and inorganic P (Pi) compositions in poultry litters during the seven-day composting period using sequential extraction in combination with P K-edge X-ray absorption near-edge structure (XANES) and solution (31)P nuclear magnetic resonance (NMR) spectroscopy. The result of sequential extraction illustrated that the significant decrease of H2O-P by 55% in poultry litters occurred concomitantly with the increase of HCl-Pi and HCl-Po during the composting period (p < 0.05). X-ray diffraction results for poultry litter samples showed three distinct peaks indicative of hydroxyapatite. Phosphorus K-edge XANES confirmed the increase of hydroxyapatite during the composting period, corresponding to the increase of HCl-Pi determined by the sequential extraction. The NaOH-EDTA extraction for solution (31)P NMR revealed that myo-inositol hexakisphosphate (IHP) constituted about 80% of phosphate monoesters and was increased from 16 to 28% in the poultry litter during the composting period. The combined applications of chemical extraction and molecular-spectroscopic techniques determined that water-soluble P in poultry litter was transformed into less soluble phases, primarily hydroxyapatite and IHP, during the composting period. PMID:24735189

  5. Evidence for 5d-σ and 5d-π covalency in lanthanide sesquioxides from oxygen K-edge X-ray absorption spectroscopy.

    PubMed

    Altman, Alison B; Pacold, Joseph I; Wang, Jian; Lukens, Wayne W; Minasian, Stefan G

    2016-06-14

    The electronic structure in the complete series of stable lanthanide sesquioxides, Ln2O3 (Ln = La to Lu, except radioactive Pm), has been evaluated using oxygen K-edge X-ray absorption spectroscopy (XAS) with a scanning transmission X-ray microscope (STXM). The experimental results agree with recent synthetic, spectroscopic and theoretical investigations that provided evidence for 5d orbital involvement in lanthanide bonding, while confirming the traditional viewpoint that there is little Ln 4f and O 2p orbital mixing. However, the results also showed that changes in the energy and occupancy of the 4f orbitals can impact Ln 5d and O 2p mixing, leading to several different bonding modes for seemingly identical Ln2O3 structures. On moving from left to right in the periodic table, abrupt changes were observed for the energy and intensity of transitions associated with Ln 5d and O 2p antibonding states. These changes in peak intensity, which were directly related to the amounts of O 2p and Ln 5d mixing, were closely correlated to the well-established trends in the chemical accessibility of the 4f orbitals towards oxidation or reduction. The unique insight provided by the O K-edge XAS is discussed in the context of several recent theoretical and physical studies on trivalent lanthanide compounds. PMID:26979662

  6. Nitrogen K-edge X-ray absorption near edge structure (XANES) spectra of purine-containing nucleotides in aqueous solution

    SciTech Connect

    Shimada, Hiroyuki; Fukao, Taishi; Minami, Hirotake; Ukai, Masatoshi; Fujii, Kentaro; Yokoya, Akinari; Fukuda, Yoshihiro; Saitoh, Yuji

    2014-08-07

    The N K-edge X-ray absorption near edge structure (XANES) spectra of the purine-containing nucleotide, guanosine 5{sup ′}-monophosphate (GMP), in aqueous solution are measured under various pH conditions. The spectra show characteristic peaks, which originate from resonant excitations of N 1s electrons to π* orbitals inside the guanine moiety of GMP. The relative intensities of these peaks depend on the pH values of the solution. The pH dependence is explained by the core-level shift of N atoms at specific sites caused by protonation and deprotonation. The experimental spectra are compared with theoretical spectra calculated by using density functional theory for GMP and the other purine-containing nucleotides, adenosine 5{sup ′}-monophosphate, and adenosine 5{sup ′}-triphosphate. The N K-edge XANES spectra for all of these nucleotides are classified by the numbers of N atoms with particular chemical bonding characteristics in the purine moiety.

  7. Quantum simulation of thermally-driven phase transition and oxygen K-edge x-ray absorption of high-pressure ice

    PubMed Central

    Kang, Dongdong; Dai, Jiayu; Sun, Huayang; Hou, Yong; Yuan, Jianmin

    2013-01-01

    The structure and phase transition of high-pressure ice are of long-standing interest and challenge, and there is still a huge gap between theoretical and experimental understanding. The quantum nature of protons such as delocalization, quantum tunneling and zero-point motion is crucial to the comprehension of the properties of high-pressure ice. Here we investigated the temperature-induced phase transition and oxygen K-edge x-ray absorption spectra of ice VII, VIII and X using ab initio path-integral molecular dynamics simulations. The tremendous difference between experiments and the previous theoretical predictions is closed for the phase diagram of ice below 300 K at pressures up to 110 GPa. Proton tunneling assists the proton-ordered ice VIII to transform into proton-disordered ice VII where only thermal activated proton-transfer cannot occur. The oxygen K edge with its shift is sensitive to the order-disorder transition, and therefore can be applied to diagnose the dynamics of ice structures. PMID:24253589

  8. Characterization of Oxygen Containing Functional Groups on Carbon Materials with Oxygen K-edge X-ray Absorption Near Edge Structure Spectroscopy

    SciTech Connect

    K Kim; P Zhu; L Na; X Ma; Y Chen

    2011-12-31

    Surface functional groups on carbon materials are critical to their surface properties and related applications. Many characterization techniques have been used to identify and quantify the surface functional groups, but none is completely satisfactory especially for quantification. In this work, we used oxygen K-edge X-ray absorption near edge structure (XANES) spectroscopy to identify and quantify the oxygen containing surface functional groups on carbon materials. XANES spectra were collected in fluorescence yield mode to minimize charging effect due to poor sample conductivity which can potentially distort XANES spectra. The surface functional groups are grouped into three types, namely carboxyl-type, carbonyl-type, and hydroxyl-type. XANES spectra of the same type are very similar while spectra of different types are significantly different. Two activated carbon samples were analyzed by XANES. The total oxygen contents of the samples were estimated from the edge step of their XANES spectra, and the identity and abundance of different functional groups were determined by fitting of the sample XANES spectrum to a linear combination of spectra of the reference compounds. It is concluded that oxygen K-edge XANES spectroscopy is a reliable characterization technique for the identification and quantification of surface functional groups on carbon materials.

  9. XRD and XAS structural study of CuAlO2 under high pressure.

    PubMed

    Pellicer-Porres, J; Segura, A; Ferrer-Roca, Ch; Polian, A; Munsch, P; Kim, D

    2013-03-20

    We present the results of x-ray diffraction and x-ray absorption spectroscopy experiments in CuAlO(2) under high pressure. We discuss the polarization dependence of the x-ray absorption near-edge structure at the Cu K-edge. XRD under high pressure evidences anisotropic compression, the a-axis being more compressible than the c-axis. EXAFS yields the copper-oxygen bond length, from which the only internal parameter of the delafossite structure is deduced. The combination of anisotropic compression and the internal parameter decrease results in a regularization of the AlO(6) octahedra. The anisotropic compression is related to the chemical trends observed in the lattice parameters when Al is substituted by other trivalent cations. Both experiments evidence the existence of an irreversible phase transition that clearly manifests at 35 ± 2 GPa. The structure of the high-pressure polymorph could not be determined, but it implies a change of the Cu environment, which remains anisotropic. Precursor effects are observed from the lowest pressures, which are possibly related to crystal breaking at a submicroscopic scale with partial reorientation of the crystallites. PMID:23423689

  10. A Monte Carlo simulation study of an improved K-edge log-subtraction X-ray imaging using a photon counting CdTe detector

    NASA Astrophysics Data System (ADS)

    Lee, Youngjin; Lee, Amy Candy; Kim, Hee-Joung

    2016-09-01

    Recently, significant effort has been spent on the development of photons counting detector (PCD) based on a CdTe for applications in X-ray imaging system. The motivation of developing PCDs is higher image quality. Especially, the K-edge subtraction (KES) imaging technique using a PCD is able to improve image quality and useful for increasing the contrast resolution of a target material by utilizing contrast agent. Based on above-mentioned technique, we presented an idea for an improved K-edge log-subtraction (KELS) imaging technique. The KELS imaging technique based on the PCDs can be realized by using different subtraction energy width of the energy window. In this study, the effects of the KELS imaging technique and subtraction energy width of the energy window was investigated with respect to the contrast, standard deviation, and CNR with a Monte Carlo simulation. We simulated the PCD X-ray imaging system based on a CdTe and polymethylmethacrylate (PMMA) phantom which consists of the various iodine contrast agents. To acquired KELS images, images of the phantom using above and below the iodine contrast agent K-edge absorption energy (33.2 keV) have been acquired at different energy range. According to the results, the contrast and standard deviation were decreased, when subtraction energy width of the energy window is increased. Also, the CNR using a KELS imaging technique is higher than that of the images acquired by using whole energy range. Especially, the maximum differences of CNR between whole energy range and KELS images using a 1, 2, and 3 mm diameter iodine contrast agent were acquired 11.33, 8.73, and 8.29 times, respectively. Additionally, the optimum subtraction energy width of the energy window can be acquired at 5, 4, and 3 keV for the 1, 2, and 3 mm diameter iodine contrast agent, respectively. In conclusion, we successfully established an improved KELS imaging technique and optimized subtraction energy width of the energy window, and based on

  11. Polarized X-Ray Absorption Spectroscopy Studies of Copper in High Temperature Superconductors

    NASA Astrophysics Data System (ADS)

    Mini, Susan M.

    One can take advantage of the linearly polarized nature of the x-rays from a synchrotron to study the electronic and structural properties of single crystals or magnetically aligned powders. Since the advent of layered copper oxide compounds as high temperature superconductors (1) the structures of La_{rm 2-x}Sr _{rm x}CuO _4, Nd_{rm 2-x }Ce_{rm x}CuO _4 and YBa_2Cu _3O_{rm 7-y} have been of extreme interest. In this study, the powder samples of these compounds were magnetically aligned such that the electric vector was either perpendicular or parallel to the crystallographic c axis. The results of polarized XANES (X-ray Absorption Near Edge Spectroscopy) measurements at the copper K-edge (8979 eV) of all three structures will be presented. The EXAFS (Extended X-ray Absorption Fine Structure) of magnetically aligned YBa_2Cu _3O_{6.9} were used to characterize the local structure as well as study the structural changes of the Cu1-O4 and Cu2-O4 bonds in as a function of temperature (20 to 300 K). In this manner, the Cu1-O4 and Cu2-O4 bonds, which are thought to play a role in the superconductivity of the sample, are distinguishable. The complementary technique of XANES is used to study the electronic structure of the superconducting copper oxides as well as alkali cuprates M^{ rm I}CuO_2 (M = Na, K, Rb and Cs) and rare earth copper oxides RE _2CuO_4 (RE = Pr, Nd, Sm, Eu and Gd). A method (2) for determining the effective charge is described and applied to the copper oxides. ftn 1. J. G. Bednorz and K. A. Muller; Z Phys. B64, 189 (1986). 2. E. E. Alp, G L. Goodman, L. Soderholm, S.M. Mini, M. Ramanathan, G. K. Shenoy and A. S. Bommannavar, J.Phys. Condens, Matter 1, 6463 (1989).

  12. Morphology-dependent luminescence from ZnO nanostructures - An X-ray excited optical luminescence study at the Zn K-edge

    SciTech Connect

    Lobacheva, Olga; Murphy, Michael W; Ko, Jun Young Peter; Sham, Tsun-Kong

    2009-08-28

    ZnO nanostructures have been synthesized by thermal evaporation on Si substrates. It is found that the morphologies of the nanostructures are governed by growth conditions such as temperature, carrier-gas flow rate, and the nature of the substrate (with and without a catalyst). We report X-ray excited optical luminescence from ZnO nanostructures of distinctly different morphologies in the energy and time domain using excitation photon energies across the Zn K-edge. X-ray excited optical luminescence (XEOL) and X-ray absorption near edge structure (XANES) study has clearly shown the morphology dependence of the ZnO optical properties. A correlation of luminescence with morphology, size, and crystallinity emerges.

  13. Inorganic iodine incorporation into soil organic matter: evidence from iodine K-edge X-ray absorption near-edge structure.

    PubMed

    Yamaguchi, Noriko; Nakano, Masashi; Takamatsu, Rieko; Tanida, Hajime

    2010-06-01

    The transformation of inorganic iodine (I(-) and IO(3)(-)) incubated in soils with varying amounts of organic matter (Andosols from the surface layer of an upland field and forest, as well as Acrisols from surface and subsurface layers of an upland field) was investigated by using the iodine K-edge X-ray absorption near-edge structure (XANES). After 60d of reaction, both I(-) and IO(3)(-) were transformed into organoiodine in surface soils containing sufficient amounts of organic matter, whereas IO(3)(-) remained unchanged in the subsurface soil of Acrisols with low organic matter contents. Transformation of IO(3)(-) into organoiodine was not retarded when the microbial activity in soil was reduced by gamma-ray irradiation, suggesting that microbial activity was not essential for the transformation of inorganic iodine into organoiodine. Soil organic matter has the ability to transform inorganic iodine into organoiodine. PMID:18640749

  14. X-ray absorption spectroscopy by full-field X-ray microscopy of a thin graphite flake: Imaging and electronic structure via the carbon K-edge

    PubMed Central

    Hitchock, Adam P; Ke, Xiaoxing; Van Tendeloo, Gustaaf; Ewels, Chris P; Guttmann, Peter

    2012-01-01

    Summary We demonstrate that near-edge X-ray-absorption fine-structure spectra combined with full-field transmission X-ray microscopy can be used to study the electronic structure of graphite flakes consisting of a few graphene layers. The flake was produced by exfoliation using sodium cholate and then isolated by means of density-gradient ultracentrifugation. An image sequence around the carbon K-edge, analyzed by using reference spectra for the in-plane and out-of-plane regions of the sample, is used to map and spectrally characterize the flat and folded regions of the flake. Additional spectral features in both π and σ regions are observed, which may be related to the presence of topological defects. Doping by metal impurities that were present in the original exfoliated graphite is indicated by the presence of a pre-edge signal at 284.2 eV. PMID:23016137

  15. X-ray natural linear dichroism of graphitic materials across the carbon K-edge: Correction for perturbing high-order harmonics

    NASA Astrophysics Data System (ADS)

    Jansing, C.; Mertins, H. C.; Gaupp, A.; Sokolov, A.; Gilbert, M. C.; Wahab, H.; Timmers, H.

    2016-05-01

    Reflectivity measurements on graphitic materials such as graphene at energies across the carbon K-edge are frustrated by significant intensity loss due to adventitious carbon on beamline mirrors. Such intensity reduction enhances effects due to perturbing high-order harmonics in the beam. These effects distort the actual structure of the reflectance curve. In order to overcome this limitation, a correction technique has been developed and demonstrated first with measurements for highly ordered pyrolytic graphite. The same approach may be applied to other graphitic materials such as graphene and it may be used with other synchrotron beamlines. The fraction of high-order harmonics was determined by passing the incident beam through a 87 nm thin silicon nitride absorber that can be well modeled. Using the corrected measurements the x-ray natural linear dichroism of the sample has been determined.

  16. Position and flux stabilization of X-ray beams produced by double-crystal monochromators for EXAFS scans at the titanium K-edge.

    PubMed

    van Silfhout, Roelof; Kachatkou, Anton; Groppo, Elena; Lamberti, Carlo; Bras, Wim

    2014-03-01

    The simultaneous and active feedback stabilization of X-ray beam position and monochromatic beam flux during EXAFS scans at the titanium K-edge as produced by a double-crystal monochromator beamline is reported. The feedback is generated using two independent feedback loops using separate beam flux and position measurements. The flux is stabilized using a fast extremum-searching algorithm that is insensitive to changes in the synchrotron ring current and energy-dependent monochromator output. Corrections of beam height are made using an innovative transmissive beam position monitor instrument. The efficacy of the feedback stabilization method is demonstrated by comparing the measurements of EXAFS spectra on inhomogeneous diluted Ti-containing samples with and without feedback applied. PMID:24562562

  17. X-ray absorption spectra of nucleotides (AMP, GMP, and CMP) in liquid water solutions near the nitrogen K-edge

    NASA Astrophysics Data System (ADS)

    Ukai, Masatoshi; Yokoya, Akinari; Fujii, Kentaro; Saitoh, Yuji

    2010-07-01

    The X-ray absorption of nucleotides (adenosine-5'-monophosphate, guanosine 5'-monophosphate, and cytidine 5'-monophosphate) are measured in both water solutions and thin solid films at X-ray energies near the nitrogen K-edge in the 'water-window' region. Each spectrum corresponds to the selective excitation of a nucleobase site in a nucleotide, and thus has features similar to the spectrum of the corresponding nucleobase. An additional new peak in the energy region of the nitrogen 1s → π* resonance is observed for each nucleotide. No significant difference between the water solutions and thin solid films is found, which might be attributable to the hydrophobic properties of a nucleobase in a nucleotide.

  18. Double conical crystal x-ray spectrometer for high resolution ultrafast x-ray absorption near-edge spectroscopy of Al K edge

    NASA Astrophysics Data System (ADS)

    Levy, A.; Dorchies, F.; Fourment, C.; Harmand, M.; Hulin, S.; Santos, J. J.; Descamps, D.; Petit, S.; Bouillaud, R.

    2010-06-01

    An x-ray spectrometer devoted to dynamical studies of transient systems using the x-ray absorption fine spectroscopy technique is presented in this article. Using an ultrafast laser-induced x-ray source, this optical device based on a set of two potassium acid phthalate conical crystals allows the extraction of x-ray absorption near-edge spectroscopy structures following the Al absorption K edge. The proposed experimental protocol leads to a measurement of the absorption spectra free from any crystal reflectivity defaults and shot-to-shot x-ray spectral fluctuation. According to the detailed analysis of the experimental results, a spectral resolution of 0.7 eV rms and relative fluctuation lower than 1% rms are achieved, demonstrated to be limited by the statistics of photon counting on the x-ray detector.

  19. Tetrahalide Complexes of the [U(NR)(2)]2+ Ion: Synthesis, Theory, and Chlorine K-Edge X-ray Absorption Spectroscopy

    SciTech Connect

    Spencer, Liam P.; Yang, Ping; Minasian, Stefan G.; Jilek, Robert E.; Batista, Enrique R.; Boland, Kevin S.; Boncella, James M.; Conradson, S. D.; Clark, David L.; Hayton, Trevor W.; Kozimor, Stosh A.; Martin, Richard L.; MacInnes, Molly M.; Olson, Angela C.; Scott, Brian L.; Shuh, D. K.; Wilkerson, Marianne P.

    2013-02-13

    Synthetic routes to salts containing uranium bisimido tetrahalide anions [U(NR)(2)X-4](2-) (X = Cl-, Br-) and non-coordinating NEt4+ and PPh4+ countercations are reported. In general, these compounds can be prepared from U(NR)(2)I-2(THF)(x) (x = 2 and R = 'Bu, Ph; x = 3 and R = Me) upon addition of excess halide. In addition to providing stable coordination complexes with Cl-, the [U(NMe)(2)](2 +) cation also reacts with Br- to form stable [NEt4](2)[U(NMe)(2)Br-4] complexes. These materials were used as a platform to compare electronic structure and bonding in [U(NR)(2)](2+) with [UO2](2+). Specifically, Cl K-edge X-ray absorption spectroscopy (XAS) and both ground-state and time-dependent hybrid density functional theory (DFT and TDDFT) were used to probe U-Cl bonding interactions in [PPh4](2)[U((NBu)-Bu-t)(2)Cl-4] and [PPh4](2)[UO2Cl4]. The DFT and XAS results show the total amount of Cl 3p character mixed with the U 5f orbitals was roughly 7-10% per U-Cl bond for both compounds, which shows that moving from oxo to imido has little effect on orbital mixing between the U 5f and equatorial Cl 3p orbitals. The results are presented in the context of recent Cl K-edge XAS and DFT studies on other hexavalent uranium chloride systems with fewer oxo or imido ligands.

  20. Sulfur K-Edge XAS and DFT Calculations on NitrileHydratase: Geometric and Electronic Structure of the Non-heme Iron Active Site

    SciTech Connect

    Dey, Abhishek; Chow, Marina; Taniguchi, Kayoko; Lugo-Mas, Priscilla; Davin, Steven; Maeda, Mizuo; Kovacs, Julie A.; Odaka, Masafumi; Hodgson, Keith O.; Hedman, Britt; Solomon, Edward I.; /SLAC, SSRL

    2006-09-28

    The geometric and electronic structure of the active site of the non-heme iron enzyme nitrile hydratase (NHase) is studied using sulfur K-edge XAS and DFT calculations. Using thiolate (RS{sup -})-, sulfenate (RSO{sup -})-, and sulfinate (RSO{sub 2}{sup -})-ligated model complexes to provide benchmark spectral parameters, the results show that the S K-edge XAS is sensitive to the oxidation state of S-containing ligands and that the spectrum of the RSO- species changes upon protonation as the S-O bond is elongated (by {approx}0.1 {angstrom}). These signature features are used to identify the three cysteine residues coordinated to the low-spin Fe{sup III} in the active site of NHase as CysS{sup -}, CysSOH, and CysSO{sub 2}{sup -} both in the NO-bound inactive form and in the photolyzed active form. These results are correlated to geometry-optimized DFT calculations. The pre-edge region of the X-ray absorption spectrum is sensitive to the Z{sub eff} of the Fe and reveals that the Fe in [FeNO]{sup 6} NHase species has a Z{sub eff} very similar to that of its photolyzed Fe{sup III} counterpart. DFT calculations reveal that this results from the strong {pi} back-bonding into the {pi}* antibonding orbital of NO, which shifts significant charge from the formally t{sub 2}{sup 6} low-spin metal to the coordinated NO.

  1. Insights into molecular chemistry of Chiapas amber using infrared-light microscopy, PIXE/RBS, and sulfur K-edge XANES spectroscopy

    NASA Astrophysics Data System (ADS)

    Riquelme, Francisco; Northrup, Paul; Ruvalcaba-Sil, José Luis; Stojanoff, Vivian; Peter Siddons, D.; Alvarado-Ortega, Jesús

    2014-07-01

    Chiapas amber is a natural occurring fossil resin structurally composed of long macromolecule chains with semicrystalline phases associated with both fossil and polymerization process. The most conspicuous characteristic of this fossil polymer is that it preserves ancient organic inclusions. In the present work, PIXE/RBS spectrometry (particle-induced X-ray emission/Rutherford backscattering) were combined with complementary K-edge XANES spectroscopy (X-ray absorption near-edge structure) to identify the amount of sulfur in Chiapas amber. Initially, the amber samples were examined using infrared reflected photomicrography. Amber is transparent to infrared light and so embedded plants and animals are easily visible, showing them in extraordinary detail, as if they were immersed in a water-like solution. The PIXE/RBS data show that the proportion of sulfur in amber is significantly higher than that found in recently formed resins, consistent with the biogeochemical process that transforms the resin into amber during long-term burial in geological deposits. The sulfur K-edge XANES spectra from amber confirm the sulfur abundance and reveal sulfur species in the reduced and intermediate oxidation states in amber. Almost no oxidized sulfur was found, whereas the recent resins show mostly oxidized sulfur fractions. This indicates that labile oxidized sulfur decays during fossilization and resin maturation must occur under conditions of oxygen depletion. The implications of the presence of sulfur in amber for organic preservation is also discussed here. Sulfur compounds work as a polymer additive that promotes intense resin solidification. This restricts the early oxidant-specific biodegradation of the embedded biomatter and, over geological time, provides greater stability against chemical changes.

  2. Atomic structure of a polar ceramic/metal interface: {l_brace}222{r_brace}MgO/Cu

    SciTech Connect

    Benedek, R.; Shashkov, D.A.; Seidman, D.N.; Muller, D.A.; Silcox, J.; Chisholm, M.F.; Yang, L.H.

    1998-02-01

    {l_brace}222{r_brace}MgO/Cu is one of the most extensively characterized ceramic/metal interfaces, in view of the atom probe field ion microscopy, Z-contrast Scanning Transmission Electron Microscopy (STEM), and spatially resolved Electron energy loss spectroscopy (EELS) measurements performed by the present authors, as well as the high resolution electron microscopy (HREM) of this system by others. Atomistic simulations with local density functional theory (LDFT) and Molecular Dynamics (MD) have been performed to gain additional insight into the structure of this interface. This presentation describes an interface interatomic potential for {l_brace}222{r_brace}MgO/Cu derived from LDFT total energy calculations, and its application to structural properties, including the terminating species, the absence of dislocation standoff, and the symmetry of the interfacial dislocation network.

  3. Design and performance of a 4.5GHz circularly polarized YBa 2Cu 3O 7 microstrip antenna

    NASA Astrophysics Data System (ADS)

    Zhu, M. H.; Cao, B. S.; Zhang, X. X.; Li, W. H.; Yuan, H. J.; Wang, Y. J.; Zhang, L. W.; Dong, D. J.; Liu, M. L.; Cui, D. F.; He, M.; Zhou, Y. L.; Liu, T. J.

    1997-08-01

    A 4.5GHz circularly polarized YBCO microstrip antenna was designed and fabricated. Measurements showed that at 77K the superconducting antenna had about 3dB gain improvement over the comparable silver antenna, in agreement with the calculated results using the modified Green function method.

  4. Crystal-field polarization and the insulating gap in FeO, CoO, NiO, and La sub 2 CuO sub 4 (US). [FeO; CoO; NiO; La d2CuO d ix

    SciTech Connect

    Norman, M.R. )

    1991-07-15

    An orbital polarization correction to local spin density (LSD) theory is developed in a crystal field basis, and applied to FeO, CoO, NiO, and La{sub 2}CuO{sub 4}. The result is a substantial enhancement of the LSD band gap for NiO, and the creation of an insulating ground state for FeO, CoO, and La{sub 2}CuO{sub 4}.

  5. Micro-Structural Properties of YBa2Cu3O(7-x)/ZnO Nanorods on SrTiO3.

    PubMed

    Jin, Zhenlan; Park, Changin; Song, Kyu Jeong; Kang, Sukil; Ko, Kyeong-Eun; Park, Chan; Ko, Rock Kil; Han, S W

    2015-01-01

    We examined the local structural and the interfacial properties of YBa2Cu3O(7-x) (YBCO)/ZnO nanorods on SrTiO3 (STO) substrates using various measurements. Vertically aligned ZnO nanorods were synthesized on STO substrates using a catalyst-free metal-organic chemical vapor deposition. YBCO films were deposited ex-situ on the ZnO nanorods/STO templates using a DC magnetron sputtering deposition. X-ray diffraction revealed that the YBCO films were crystallized along their c-axes on the ZnO nanorods/STO templates. Transmission electron microscopy measurements demonstrated that YBCO filled the space between ZnO nanorods and that both interfaces of YBCO/ZnO nanorods and ZnO nanorods/STO were quite clean with no disorder. Polarization-dependent extended X-ray absorption fine structure measurements at the Cu K edge showed extra disorder in the CuO2 planes of YBCO/ZnO nanorods/STO, compared with that of YBCO/STO. The superconductivity transition temperature (T(c)) of YBCO/ZnO nanorods/STO was approximately 50 K whereas that of YBCO/STO was 93 K. The decrease of T(c) of YBCO/ZnO nanorods/STO was ascribed to the structural disorder of CuO2 planes as well as grain boundaries in the YBCO films. PMID:26328417

  6. First demonstration of 10 keV-width energy-discrimination K-edge radiography using a cadmium-telluride X-ray camera with a tungsten-target tube

    NASA Astrophysics Data System (ADS)

    Watanabe, Manabu; Sato, Eiichi; Abderyim, Purkhet; Abudurexiti, Abulajiang; Hagiwara, Osahiko; Matsukiyo, Hiroshi; Osawa, Akihiro; Enomoto, Toshiyuki; Nagao, Jiro; Sato, Shigehiro; Ogawa, Akira; Onagawa, Jun

    2011-05-01

    Energy-discrimination X-ray camera is useful to perform monochromatic radiography using polychromatic X-rays. This X-ray camera was developed to carry out K-edge radiography using cerium and gadolinium-based contrast media. In this camera, objects are irradiated by a cone beam from a tungsten-target X-ray generator, and penetrating X-ray photons are detected by a cadmium-telluride detector with amplifiers. Both optimal photon-energy level and energy width are selected using a multichannel analyzer, and the photon number is counted by a counter card. Radiography was performed by the detector scanning using an x- y stage driven by a two-stage controller, and radiograms were shown on a personal computer monitor. In radiography, tube voltage and current were 90 kV and 5.8 μA, respectively, and the X-ray intensity was 0.61 μGy/s at 1.0 m from the X-ray source. The K-edge energies of cerium and gadolinium are 40.3 and 50.3 keV, respectively, and 10 keV-width enhanced K-edge radiography was performed using X-ray photons with energies just beyond K-edge energies of cerium and gadolinium. Thus, cerium K-edge radiography was carried out using X-ray photons with an energy range from 40.3 to 50. 3 keV, and gadolinium K-edge radiography was accomplished utilizing photon energies ranging from 50.3 to 60.3 keV.

  7. Experimental results of use of triple-energy X-ray beam with K-edge filter in multi-energy imaging

    NASA Astrophysics Data System (ADS)

    Kim, D.; Lee, S.; Jeon, P.-H.

    2016-04-01

    Multi-energy imaging is useful for contrast enhancement of lesions, quantitative analysis of specific materials and material separation in the human body. Generally, dual-energy methods are applied to discriminating two materials, but this method cannot discriminate more than two materials. Photon-counting detectors provide spectral information from polyenergetic X-rays using multiple energy bins. In this work, we developed triple-energy X-ray beams using a filter with K-edge energy and applied them experimentally. The energy spectra of triple-energy X-ray beams were assessed by using a spectrometer. The designed triple-energy X-ray beams were validated by measuring quantitative evaluations with mean energy ratio (MER), contrast variation ratio (CVR) and exposure efficiency (EE). Then, triple-energy X-ray beams were used to extract density map of three materials, iodine (I), aluminum (Al) and polymethyl methacrylate (PMMA). The results of the thickness density maps obtained with the developed triple-energy X-ray beams were compared to those acquired using the photon-counting method. As a result, it was found experimentally that the proposed triple-energy X-ray beam technique can separate the three materials as well as the photon-counting method.

  8. Evolution of phosphorus complexation and mineralogy during (hydro)thermal treatments of activated and anaerobically digested sludge: Insights from sequential extraction and P K-edge XANES.

    PubMed

    Huang, Rixiang; Tang, Yuanzhi

    2016-09-01

    (Hydro)thermal treatments of sewage sludge is a promising option that can simultaneously target safe waste disposal, energy recovery, and nutrient recovery/recycling. The speciation of phosphorus (P) in sludge is of great relevance to P reclamation/recycling and soil application of sludge-derived products, thus it is critical to understand the effects of different treatment techniques and conditions on P speciation. This study systematically characterized P speciation (i.e. complexation and mineral forms) in chars derived from pyrolysis and hydrothermal carbonization (HTC) of municipal sewage sludges. Combined sequential extraction and P K-edge X-ray absorption near edge structure (XANES) spectroscopy analysis revealed the dependence of P transformation on treatment conditions and metal composition in the feedstocks. Pyrolysis of sludges decreased the relative abundance of phytic acid while increased the abundance of Al-associated P. HTC thoroughly homogenized and exposed P for interaction with various metals/minerals, with the final P speciation closely related to the composition/speciation of metals and their affinities to P. Results from this study revealed the mechanisms of P transformation during (hydro)thermal treatments of sewage sludges, and might be applicable to other biosolids. It also provided fundamental knowledge basis for the design and selection of waste management strategies for better P (re)cycling and reclamation. PMID:27232988

  9. Investigation of soil legacy phosphorus transformation in long-term agricultural fields using sequential fractionation, P K-edge XANES and solution P NMR spectroscopy.

    PubMed

    Liu, Jin; Hu, Yongfeng; Yang, Jianjun; Abdi, Dalel; Cade-Menun, Barbara J

    2015-01-01

    Understanding legacy phosphorus (P) build-up and draw-down from long-term fertilization is essential for effective P management. Using replicated plots from Saskatchewan, Canada, with P fertilization from 1967 to 1995 followed by either P fertilization or P cessation (1995-2010), soil P was characterized in surface and subsurface layers using sequential fractionation, P K-edge X-ray absorption near-edge structure (XANES) and solution (31)P nuclear magnetic resonance (P NMR) spectroscopy. Legacy P from a 28-year build-up was sufficient for 15 years of wheat cultivation, resulting in no significant differences in crop yield in 2010. In surface soils, soil test (Olsen) P decreased significantly in unfertilized plots compared with 1995, which was reflected in declining aluminum (hydr)oxide-associated inorganic P by fractionation and XANES. Furthermore, XANES analysis revealed a decrease of calcium-associated P in 2010-unfertilized soils at both depths and an increase of Fe (hydr)oxides-associated P in the 2010-fertilized and -unfertilized surface soils relative to the 1995 soils. Increased total organic P and orthophosphate diesters by P NMR and accumulated inositol hexaphosphate by XANES were observed in surface soils with P fertilization cessation. In subsurface soils, few legacy P transformations were detected. These results provide important information about legacy P to improve agricultural sustainability while mitigating water quality deterioration. PMID:25426546

  10. An unambiguous signature in molecular frame photoelectron angular distributions of core hole localization in fluorine K-edge photoionization of CF4

    NASA Astrophysics Data System (ADS)

    McCurdy, C. W.; Rescigno, T. N.; Trevisan, C. S.; Lucchese, R. R.

    2016-05-01

    Molecular Frame Photoelectron Angular Distributions (MFPADs) are calculated using the Complex Kohn variational method for core-hole ionization of the carbon and fluorines in CF4 at photoelectron energies below 15 eV. The angular distributions for localized versus delocalized core-hole creation on the four equivalent fluorines are radically different. A strong propensity for the dissociation to take place via the mechanism hν +CF4 -->CF 4 + +e- -->CF 3 + +F(1s-1) -->CF 3 + +F+ + 2e- in which a core excited neutral fluorine atom ionizes during or after dissociation creates the conditions for experimental observation of core hole localization. Comparison with recent unpublished experiments at the Advanced Light Source that measured the Recoil Frame Photoelectron Angular Distributions (averaged over CF3 rotations around the recoil axis) for fluorine K-edge ionization gives unambiguous evidence that these experiments directly observed the creation of an almost completely localized core hole on the dissociating fluorine atom when the molecule was initially photoionized. Work supported by USDOE, OBES Chemical Sciences, Geosciences, and Biosciences Division.

  11. Retention Mechanisms of Citric Acid in Ternary Kaolinite-Fe(III)-Citrate Acid Systems Using Fe K-edge EXAFS and L3,2-edge XANES Spectroscopy

    NASA Astrophysics Data System (ADS)

    Yang, Jianjun; Wang, Jian; Pan, Weinan; Regier, Tom; Hu, Yongfeng; Rumpel, Cornelia; Bolan, Nanthi; Sparks, Donald

    2016-05-01

    Organic carbon (OC) stability in tropical soils is strongly interlinked with multivalent cation interaction and mineral association. Low molecular weight organic acids (LMWOAs) represent the readily biodegradable OC. Therefore, investigating retention mechanisms of LMWOAs in mineral-cation-LMWOAs systems is critical to understanding soil C cycling. Given the general acidic conditions and dominance of kaolinite in tropical soils, we investigated the retention mechanisms of citric acid (CA) in kaolinite-Fe(III)-CA systems with various Fe/CA molar ratios at pH ~3.5 using Fe K-edge EXAFS and L3,2-edge XANES techniques. With Fe/CA molar ratios >2, the formed ferrihydrite mainly contributed to CA retention through adsorption and/or coprecipitation. With Fe/CA molar ratios from 2 to 0.5, ternary complexation of CA to kaolinite via a five-coordinated Fe(III) bridge retained higher CA than ferrihydrite-induced adsorption and/or coprecipitation. With Fe/CA molar ratios ≤0.5, kaolinite-Fe(III)-citrate complexation preferentially occurred, but less CA was retained than via outer-sphere kaolinite-CA complexation. This study highlighted the significant impact of varied Fe/CA molar ratios on CA retention mechanisms in kaolinite-Fe(III)-CA systems under acidic conditions, and clearly showed the important contribution of Fe-bridged ternary complexation on CA retention. These findings will enhance our understanding of the dynamics of CA and other LMWOAs in tropical soils.

  12. Ce K edge XAS of ceria-based redox materials under realistic conditions for the two-step solar thermochemical dissociation of water and/or CO2.

    PubMed

    Rothensteiner, Matthäus; Sala, Simone; Bonk, Alexander; Vogt, Ulrich; Emerich, Hermann; van Bokhoven, Jeroen A

    2015-10-28

    X-ray absorption spectroscopy was used to characterise ceria-based materials under realistic conditions present in a reactor for solar thermochemical two-step water and carbon dioxide splitting. A setup suitable for in situ measurements in transmission mode at the cerium K edge from room temperature up to 1773 K is presented. Time-resolved X-ray absorption near-edge structure (XANES) data, collected for a 10 mol% hafnium-doped ceria sample (Ce0.9Hf0.1O2-δ) during reduction at 1773 K in a flow of inert gas and during re-oxidation by CO2 at 1073 K, enables the quantitative determination of the non-stoichiometry δ of the fluorite-type structure. XANES analysis suggests the formation of the hexagonal Ce2O3 phase upon reduction in 2% hydrogen/helium at 1773 K. We discuss the experimental limitations and possibilities of high-temperature in situ XAS at edges of lower energy as well as the importance of the technique for understanding and improving the properties of ceria-based oxygen storage materials for thermochemical solar energy conversion. PMID:26412705

  13. Redox Reaction in Silicate Melts Monitored by ''Static'' In-Situ Fe K-Edge XANES up to 1180 deg. C

    SciTech Connect

    Wilke, Max; Partzsch, Georg M.; Welter, Edmund; Farges, Francois

    2007-02-02

    A new experimental setup to measure in-situ kinetics of redox reactions in silicate melts is presented. To study the progress of the Fe-redox reaction, the variation of the signal is recorded at an energy, where the difference between the spectra of the oxidized and reduced Fe in the melt is largest (''static XANES''). To control the redox conditions, the gas atmosphere could be changed between to types of gases using computer-controlled valves (N2:H2 and air, respectively). In this way, a number of reduction/oxidation cycles can be monitored in-situ and continuously. Applied at the Fe K-edge in molten silicates, we obtained a set of high quality data, which includes the very first steps of the redox reaction. An Avrami-type equation is used to investigate rate-controlling parameters for the iron oxidation/reduction kinetics for two melts (basaltic and Na trisilicate) for temperatures up to 1180 deg. C.

  14. Experimental and theoretical correlations between vanadium K-edge X-ray absorption and K[Formula: see text] emission spectra.

    PubMed

    Rees, Julian A; Wandzilak, Aleksandra; Maganas, Dimitrios; Wurster, Nicole I C; Hugenbruch, Stefan; Kowalska, Joanna K; Pollock, Christopher J; Lima, Frederico A; Finkelstein, Kenneth D; DeBeer, Serena

    2016-09-01

    A series of vanadium compounds was studied by K-edge X-ray absorption (XAS) and K[Formula: see text] X-ray emission spectroscopies (XES). Qualitative trends within the datasets, as well as comparisons between the XAS and XES data, illustrate the information content of both methods. The complementary nature of the chemical insight highlights the success of this dual-technique approach in characterizing both the structural and electronic properties of vanadium sites. In particular, and in contrast to XAS or extended X-ray absorption fine structure (EXAFS), we demonstrate that valence-to-core XES is capable of differentiating between ligating atoms with the same identity but different bonding character. Finally, density functional theory (DFT) and time-dependent DFT calculations enable a more detailed, quantitative interpretation of the data. We also establish correction factors for the computational protocols through calibration to experiment. These hard X-ray methods can probe vanadium ions in any oxidation or spin state, and can readily be applied to sample environments ranging from solid-phase catalysts to biological samples in frozen solution. Thus, the combined XAS and XES approach, coupled with DFT calculations, provides a robust tool for the study of vanadium atoms in bioinorganic chemistry. PMID:27251139

  15. Combined sulfur K-edge XANES-EXAFS study of the effect of protonation on the sulfate tetrahedron in solids and solutions.

    PubMed

    Pin, S; Huthwelker, T; Brown, M A; Vogel, F

    2013-09-01

    Sulfur K-edge X-ray absorption spectroscopy (XAS) has been used to distinguish between aqueous and solid sulfates and to investigate changes in their speciation. Data have been collected for tetrahedrally coordinated S in K2SO4 and KHSO4 solids and aqueous solutions. With a first qualitative analysis of the X-ray absorption near-edge structure (XANES) spectra, it has been observed that those for solids are much more structured and distinguishable from those of aqueous solutions. The protonation state has a strong effect on the white line of sulfates and has been assigned to the different charge delocalization in the samples, the effect of the solvating water molecules and multiple scattering effects. In the extended X-ray absorption fine structure (EXAFS) spectra, the backscattering from the first O shell dominated the EXAFS fine structure function, χ(k), but the nonlinear multiple scattering contributions occurring in the first coordination shell are significant and must be considered in the EXAFS analysis. The intensity of these contributions strongly depend on the symmetry of the system. For a distorted tetrahedron, the intensity of the multiple scattering contributions is less than that found in a regular tetrahedron. The FEFF code has been used to model the contributions of the multiple-scattering processes. The observed experimental evidence in the XAS data can be used to distinguish between sulfates in solids and liquids. This is applicable to many chemical, geochemical, and biological systems. PMID:23924171

  16. Retention Mechanisms of Citric Acid in Ternary Kaolinite-Fe(III)-Citrate Acid Systems Using Fe K-edge EXAFS and L3,2-edge XANES Spectroscopy

    PubMed Central

    Yang, Jianjun; Wang, Jian; Pan, Weinan; Regier, Tom; Hu, Yongfeng; Rumpel, Cornelia; Bolan, Nanthi; Sparks, Donald

    2016-01-01

    Organic carbon (OC) stability in tropical soils is strongly interlinked with multivalent cation interaction and mineral association. Low molecular weight organic acids (LMWOAs) represent the readily biodegradable OC. Therefore, investigating retention mechanisms of LMWOAs in mineral-cation-LMWOAs systems is critical to understanding soil C cycling. Given the general acidic conditions and dominance of kaolinite in tropical soils, we investigated the retention mechanisms of citric acid (CA) in kaolinite-Fe(III)-CA systems with various Fe/CA molar ratios at pH ~3.5 using Fe K-edge EXAFS and L3,2-edge XANES techniques. With Fe/CA molar ratios >2, the formed ferrihydrite mainly contributed to CA retention through adsorption and/or coprecipitation. With Fe/CA molar ratios from 2 to 0.5, ternary complexation of CA to kaolinite via a five-coordinated Fe(III) bridge retained higher CA than ferrihydrite-induced adsorption and/or coprecipitation. With Fe/CA molar ratios ≤0.5, kaolinite-Fe(III)-citrate complexation preferentially occurred, but less CA was retained than via outer-sphere kaolinite-CA complexation. This study highlighted the significant impact of varied Fe/CA molar ratios on CA retention mechanisms in kaolinite-Fe(III)-CA systems under acidic conditions, and clearly showed the important contribution of Fe-bridged ternary complexation on CA retention. These findings will enhance our understanding of the dynamics of CA and other LMWOAs in tropical soils. PMID:27212680

  17. Retention Mechanisms of Citric Acid in Ternary Kaolinite-Fe(III)-Citrate Acid Systems Using Fe K-edge EXAFS and L3,2-edge XANES Spectroscopy.

    PubMed

    Yang, Jianjun; Wang, Jian; Pan, Weinan; Regier, Tom; Hu, Yongfeng; Rumpel, Cornelia; Bolan, Nanthi; Sparks, Donald

    2016-01-01

    Organic carbon (OC) stability in tropical soils is strongly interlinked with multivalent cation interaction and mineral association. Low molecular weight organic acids (LMWOAs) represent the readily biodegradable OC. Therefore, investigating retention mechanisms of LMWOAs in mineral-cation-LMWOAs systems is critical to understanding soil C cycling. Given the general acidic conditions and dominance of kaolinite in tropical soils, we investigated the retention mechanisms of citric acid (CA) in kaolinite-Fe(III)-CA systems with various Fe/CA molar ratios at pH ~3.5 using Fe K-edge EXAFS and L3,2-edge XANES techniques. With Fe/CA molar ratios >2, the formed ferrihydrite mainly contributed to CA retention through adsorption and/or coprecipitation. With Fe/CA molar ratios from 2 to 0.5, ternary complexation of CA to kaolinite via a five-coordinated Fe(III) bridge retained higher CA than ferrihydrite-induced adsorption and/or coprecipitation. With Fe/CA molar ratios ≤0.5, kaolinite-Fe(III)-citrate complexation preferentially occurred, but less CA was retained than via outer-sphere kaolinite-CA complexation. This study highlighted the significant impact of varied Fe/CA molar ratios on CA retention mechanisms in kaolinite-Fe(III)-CA systems under acidic conditions, and clearly showed the important contribution of Fe-bridged ternary complexation on CA retention. These findings will enhance our understanding of the dynamics of CA and other LMWOAs in tropical soils. PMID:27212680

  18. Polaroid H-sheet as a polarizer for 33 keV X-rays

    NASA Astrophysics Data System (ADS)

    Collins, S. P.

    1997-07-01

    It is shown that Polaroid H-sheet (iodine-doped polyvinyl alcohol) can be used to good effect as a fixed-wavelength polarizer for 33.17 keV X-ray beams. Iodine K-edge dichroic spectra of HN22 and HN38 sheets are presented, and the HN22 is used to demonstrate X-ray polarization analysis and polarization rotation.

  19. New methodological approach for the vanadium K-edge X-ray absorption near-edge structure interpretation: application to the speciation of vanadium in oxide phases from steel slag.

    PubMed

    Chaurand, Perrine; Rose, Jérôme; Briois, Valérie; Salome, Murielle; Proux, Olivier; Nassif, Vivian; Olivi, Luca; Susini, Jean; Hazemann, Jean-Louis; Bottero, Jean-Yves

    2007-05-17

    This paper presents a comparison between several methods dedicated to the interpretation of V K-edge X-ray absorption near-edge structure (XANES) features. V K-edge XANES spectra of several V-bearing standard compounds were measured in an effort to evaluate advantages and limits of each method. The standard compounds include natural minerals and synthetic compounds containing vanadium at various oxidation state (from +3 to +5) and in different symmetry (octahedral, tetrahedral, and square pyramidal). Correlations between normalized pre-edge peak area and its centroid position have been identified as the most reliable method for determining quantitative and accurate redox and symmetry information for vanadium. This methodology has been previously developed for the Fe K edge. It is also well adapted for the V K edge and is less influenced by the standard choice than other methods. This methodology was applied on an "environmental sample," i.e., a well-crystallized leached steel slag containing vanadium as traces. Micro-XANES measurements allowed elucidating the microdistribution of vanadium speciation in leached steel slag. The vanadium exhibits an important evolution from the unaltered to the altered phases. Its oxidation state increases from +3 to +5 together with the decrease of its symmetry (from octahedral to tetrahedral). PMID:17429991

  20. Visible-light photocatalysis in Cu2Se nanowires with exposed {111} facets and charge separation between (111) and (1[combining macron]1[combining macron]1[combining macron]) polar surfaces.

    PubMed

    Liu, Bin; Ning, Lichao; Zhao, Hua; Zhang, Congjie; Yang, Heqing; Liu, Shengzhong Frank

    2015-05-28

    The search for active narrow band gap semiconductor photocatalysts that directly split water or degrade organic pollutants under solar irradiation remains an open issue. We synthesized Cu2Se nanowires with exposed {111} facets using ethanol and glycerol as morphology controlling agents. The {111} facets were found to be the active facets for decomposing organic contaminants in the entire solar spectrum. Based on the polar structure of the Cu2Se {111} facets, a charge separation model between polar (111) and (1[combining macron]1[combining macron]1[combining macron]) surfaces is proposed. The internal electric field between polar (111) and (1[combining macron]1[combining macron]1[combining macron]) surfaces created by spontaneous polarization drives charge separation. The reduction and oxidation reactions occur on the positive (111) and negative (1[combining macron]1[combining macron]1[combining macron]) polar surfaces, respectively. This suggests the surface-engineering of narrow band gap semiconductors as a strategy to fabricate photocatalysts with high reactivity in the entire solar spectrum. The charge separation model can deepen the understanding of charge transfer in other semiconductor nanocrystals with high photocatalytic activities and offer guidance to design more effective photocatalysts as well as new types of solar cells, photoelectrodes and photoelectric devices. PMID:25920433

  1. Analysis of Flame Retardancy in Polymer Blends by Synchrotron X-ray K-edge Tomography and Interferometric Phase Contrast Movies.

    PubMed

    Olatinwo, Mutairu B; Ham, Kyungmin; McCarney, Jonathan; Marathe, Shashidhara; Ge, Jinghua; Knapp, Gerry; Butler, Leslie G

    2016-03-10

    Underwriters Laboratories 94 test bars have been imaged with X-ray K-edge tomography between 12 and 32 keV to assess the bromine and antimony concentration gradient across char layers of partially burnt samples. Phase contrast tomography on partially burnt samples showed gas bubbles and dark-field scattering ascribed to residual blend inhomogeneity. In addition, single-shot grating interferometry was used to record X-ray movies of test samples during heating (IR and flame) intended to mimic the UL 94 plastics flammability test. The UL 94 test bars were formulated with varying concentrations of a brominated flame retardant, Saytex 8010, and a synergist, Sb2O3, blended into high-impact polystyrene (HIPS). Depending on the sample composition, samples will pass or fail the UL 94 plastics flammability test. Tomography and interferometry imaging show differences that correlate with UL 94 performance. Key features such as char layer, gas bubble formation, microcracks, and dissolution of the flame retardant in the char layer regions are used in understanding the efficiency of the flame retardant and synergist. The samples that pass the UL 94 test have a thick, highly visible char layer as well as an interior rich in gas bubbles. Growth of gas bubbles from flame-retardant thermal decomposition is noted in the X-ray phase contrast movies. Also noteworthy is an absence of bubbles near the burning surface of the polymer; dark-field images after burning suggest a microcrack structure between interior bubbles and the surface. The accepted mechanism for flame retardant activity includes free radical quenching in the flame by bromine and antimony species. The imaging supports this as well as provides a fast inspection of other parameters, such as viscosity and surface tension. PMID:26846254

  2. In-operando synchronous time-multiplexed O K-edge x-ray absorption spectromicroscopy of functioning tantalum oxide memristors

    SciTech Connect

    Kumar, Suhas; Graves, Catherine E.; Strachan, John Paul Williams, R. Stanley; Kilcoyne, A. L. David; Tyliszczak, Tolek; Nishi, Yoshio

    2015-07-21

    Memristors are receiving keen interest because of their potential varied applications and promising large-scale information storage capabilities. Tantalum oxide is a memristive material that has shown promise for high-performance nonvolatile computer memory. The microphysics has been elusive because of the small scale and subtle physical changes that accompany conductance switching. In this study, we probed the atomic composition, local chemistry, and electronic structure of functioning tantalum oxide memristors through spatially mapped O K-edge x-ray absorption. We developed a time-multiplexed spectromicroscopy technique to enhance the weak and possibly localized oxide modifications with spatial and spectral resolutions of <30 nm and 70 meV, respectively. During the initial stages of conductance switching of a micrometer sized crosspoint device, the spectral changes were uniform within the spatial resolution of our technique. When the device was further driven with millions of high voltage-pulse cycles, we observed lateral motion and separation of ∼100 nm-scale agglomerates of both oxygen interstitials and vacancies. We also demonstrate a unique capability of this technique by identifying the relaxation behavior in the material during electrical stimuli by identifying electric field driven changes with varying pulse widths. In addition, we show that changes to the material can be localized to a spatial region by modifying its topography or uniformity, as against spatially uniform changes observed here during memristive switching. The goal of this report is to introduce the capability of time-multiplexed x-ray spectromicroscopy in studying weak-signal transitions in inhomogeneous media through the example of the operation and temporal evolution of a memristor.

  3. In-operando synchronous time-multiplexed O K-edge x-ray absorption spectromicroscopy of functioning tantalum oxide memristors

    NASA Astrophysics Data System (ADS)

    Kumar, Suhas; Graves, Catherine E.; Strachan, John Paul; Kilcoyne, A. L. David; Tyliszczak, Tolek; Nishi, Yoshio; Williams, R. Stanley

    2015-07-01

    Memristors are receiving keen interest because of their potential varied applications and promising large-scale information storage capabilities. Tantalum oxide is a memristive material that has shown promise for high-performance nonvolatile computer memory. The microphysics has been elusive because of the small scale and subtle physical changes that accompany conductance switching. In this study, we probed the atomic composition, local chemistry, and electronic structure of functioning tantalum oxide memristors through spatially mapped O K-edge x-ray absorption. We developed a time-multiplexed spectromicroscopy technique to enhance the weak and possibly localized oxide modifications with spatial and spectral resolutions of <30 nm and 70 meV, respectively. During the initial stages of conductance switching of a micrometer sized crosspoint device, the spectral changes were uniform within the spatial resolution of our technique. When the device was further driven with millions of high voltage-pulse cycles, we observed lateral motion and separation of ˜100 nm-scale agglomerates of both oxygen interstitials and vacancies. We also demonstrate a unique capability of this technique by identifying the relaxation behavior in the material during electrical stimuli by identifying electric field driven changes with varying pulse widths. In addition, we show that changes to the material can be localized to a spatial region by modifying its topography or uniformity, as against spatially uniform changes observed here during memristive switching. The goal of this report is to introduce the capability of time-multiplexed x-ray spectromicroscopy in studying weak-signal transitions in inhomogeneous media through the example of the operation and temporal evolution of a memristor.

  4. Combined Sulfur K-edge XANES Spectroscopy and Stable Isotope Analysis of Fulvic Acids and Groundwater Sulfate Identify Sulfur Cycling in a Karstic Catchment Area

    SciTech Connect

    Einsiedl,F.; Schafer, T.; Northrup, P.

    2007-01-01

    Chemical and isotope analyses on groundwater sulfate, atmospheric deposition sulfate and fulvic acids (FAs) associated sulfur were used to determine the S cycling in a karstic catchment area of the Franconian Alb, Southern Germany. Sulfur K-edge X-ray absorption near edge structure (XANES) spectroscopy provided information on the oxidation state and the mechanism of the incorporation of sulfur in FAs. During base flow {delta}{sup 34}S values of groundwater sulfate were slightly depleted to those of recent atmospheric sulfate deposition with mean amount-weighted {delta}{sup 34}S values of around + 3{per_thousand}. The {delta}{sup 18}O values of groundwater sulfate shifted to lower values compared to those of atmospheric deposition and indicated steadiness from base flow to peak flow. The reduced sulfur species (S{sub -1}/thiol; S{sub 0}/thiophene, disulfide, S{sub +2}2/sulfoxide) of soil FAs averaged around 49% of the total sulfur and {delta}{sup 34}S value in FAs was found to be 0.5{per_thousand}. The formation of polysulfides and thiols in FAs in concert with a decreasing isotope value of {delta}{sup 34}S in FAs with respect to those of atmospheric deposition sulfate suggests oxidation of H{sub 2}S, enriched in the {sup 32}S isotope, with organic material. The depletion of {delta}{sup 18}O-SO{sub 4}{sup 2-} by several per mil in groundwater sulfate with respect to those of atmospheric deposition is, therefore, consistent with the hypothesis that SO{sub 4}{sup 2-} has been cycled through the organic S pool as well as that groundwater sulfate is formed by oxidation of H{sub 2}S with organic matter in the mineral soil of the catchment area.

  5. XAS Study at Mo and Co K-Edges of the Sulfidation of a CoMo / Al2O3 Hydrotreating Catalyst

    NASA Astrophysics Data System (ADS)

    Pichon, C.; Gandubert, A. D.; Legens, C.; Guillaume, D.

    2007-02-01

    Because of its impact on environment, the removal of sulfur is an indispensable step, called hydrotreatment, in the refining of petroleum. One of the most commonly used hydrotreating catalysts is CoMo-type catalyst which is composed of molybdenum disulfide slabs promoted by cobalt atoms (CoMoS phase) and well dispersed on a high specific area alumina. As far as the highest sulfur content allowed in gasoline and diesel is continually decreasing, more and more efficient and active hydrotreating catalysts are required. In order to optimize the reactivity of the CoMo-type catalyst in hydrotreatment, a better understanding of the processes used to produce the active phase (CoMoS slabs) of the catalyst is necessary. The study reported here deals with the sulfiding mechanism of the slabs and the influence of temperature on the phenomenon. Ex situ X-ray absorption spectroscopy (XANES and EXAFS) was used to study the evolution of the structure of CoMo-type catalyst sulfided at various temperatures (from 293 to 873 K). XAS analysis was performed at both molybdenum and cobalt K-edges to obtain a cross-characterization of the sulfidation of the slabs. It evidenced the formation of various compounds, including two molybdenum oxides, MoS3 (or MoS3-like compound) and Co9S8, at specific steps of the sulfiding process. It showed the role of intermediate played by MoS3 (or MoS3-like compound) during the formation of the slabs and the competition between the appearance of promoted slabs (CoMoS phase) and Co9S8. At last, it leaded to the proposal of a mechanism for the sulfidation of the catalyst.

  6. XAS Study at Mo and Co K-Edges of the Sulfidation of a CoMo / Al2O3 Hydrotreating Catalyst

    SciTech Connect

    Pichon, C.; Gandubert, A. D.; Legens, C.; Guillaume, D.

    2007-02-02

    Because of its impact on environment, the removal of sulfur is an indispensable step, called hydrotreatment, in the refining of petroleum. One of the most commonly used hydrotreating catalysts is CoMo-type catalyst which is composed of molybdenum disulfide slabs promoted by cobalt atoms (CoMoS phase) and well dispersed on a high specific area alumina. As far as the highest sulfur content allowed in gasoline and diesel is continually decreasing, more and more efficient and active hydrotreating catalysts are required. In order to optimize the reactivity of the CoMo-type catalyst in hydrotreatment, a better understanding of the processes used to produce the active phase (CoMoS slabs) of the catalyst is necessary. The study reported here deals with the sulfiding mechanism of the slabs and the influence of temperature on the phenomenon. Ex situ X-ray absorption spectroscopy (XANES and EXAFS) was used to study the evolution of the structure of CoMo-type catalyst sulfided at various temperatures (from 293 to 873 K). XAS analysis was performed at both molybdenum and cobalt K-edges to obtain a cross-characterization of the sulfidation of the slabs. It evidenced the formation of various compounds, including two molybdenum oxides, MoS3 (or MoS3-like compound) and Co9S8, at specific steps of the sulfiding process. It showed the role of intermediate played by MoS3 (or MoS3-like compound) during the formation of the slabs and the competition between the appearance of promoted slabs (CoMoS phase) and Co9S8. At last, it leaded to the proposal of a mechanism for the sulfidation of the catalyst.

  7. Retention mechanisms of citric acid in ternary kaolinite-Fe(III)-citrate acid systems using Fe K-edge EXAFS and L3,2-edge XANES spectroscopy

    DOE PAGESBeta

    Yang, Jianjun; Wang, Jian; Pan, Weinan; Regier, Tom; Hu, Yongfeng; Rumpel, Cornelia; Bolan, Nanthi; Sparks, Donald

    2016-05-23

    Organic carbon (OC) stability in tropical soils is strongly interlinked with multivalent cation interaction and mineral association. Low molecular weight organic acids (LMWOAs) represent the readily biodegradable OC. Therefore, investigating retention mechanisms of LMWOAs in mineral-cation-LMWOAs systems is critical to understanding soil C cycling. Given the general acidic conditions and dominance of kaolinite in tropical soils, we investigated the retention mechanisms of citric acid (CA) in kaolinite-Fe(III)-CA systems with various Fe/CA molar ratios at pH ~3.5 using Fe K-edge EXAFS and L-3,2-edge XANES techniques. With Fe/CA molar ratios >2, the formed ferrihydrite mainly contributed to CA retention through adsorption and/ormore » coprecipitation. With Fe/CA molar ratios from 2 to 0.5, ternary complexation of CA to kaolinite via a five-coordinated Fe(III) bridge retained higher CA than ferrihydrite-induced adsorption and/or coprecipitation. With Fe/CA molar ratios ≤ 0.5, kaolinite-Fe(III)-citrate complexation preferentially occurred, but less CA was retained than via outer-sphere kaolinite-CA complexation. This study highlighted the significant impact of varied Fe/CA molar ratios on CA retention mechanisms in kaolinite-Fe(III)-CA systems under acidic conditions, and clearly showed the important contribution of Fe-bridged ternary complexation on CA retention. In conclusion, these findings will enhance our understanding of the dynamics of CA and other LMWOAs in tropical soils.« less

  8. Change of the In-Plane Cu-O Bond Distribution in La(2)CuO(4.1) Across T(C)

    SciTech Connect

    Leon, J.Mustre de; Acosta-Alejandro, M.; Conradson, S.D.; Bishop, A.R.

    2009-05-26

    Cu K-edge X-ray absorption fine structure (XAFS) on La{sub 2}CuO{sub 4.1} has been used to study the radial Cu-O distribution function across the superconducting transition. Fits to the isolated Cu-O XAFS signal show the presence of a non-Gaussian distribution function for temperatures away from the superconducting transition temperature. However, this distribution becomes more harmonic in the vicinity of the superconducting transition temperature T{sub c}. The results provide evidence for the coupling between the local atomic dynamics and the particles involved in the superconductivity.

  9. The effect of site geometry, Ti content and Ti oxidation state on the Ti K-edge XANES spectrum of synthetic hibonite

    NASA Astrophysics Data System (ADS)

    Doyle, P. M.; Berry, A. J.; Schofield, P. F.; Mosselmans, J. F. W.

    2016-08-01

    The Al-rich oxide hibonite (CaAl12O19) is modeled to be the second mineral to condense from a gas of solar composition and is found within calcium-aluminum-rich inclusions and the matrix of chondritic meteorites. Both Ti3+ and Ti4+ are reported in meteoritic hibonite, so hibonite has been proposed as a single mineral oxybarometer that could be used to elucidate conditions within the first 0.2 Myrs of the Solar System. Synthetic hibonites with Ti3+/(Ti3+ + Ti4+) (hereafter Ti3+/ΣTi) ranging between 0 and 1 were prepared as matrix-matched standards for meteoritic hibonite. The largest yield of both Ti-free and Ti-bearing hibonite at ∼1300 and ∼1400 °C was obtained by a single sinter under reducing conditions. In situ micro-beam Ti K-edge X-ray absorption near edge structure (XANES) spectra were recorded from the synthetic hibonites, as well as from terrestrial hibonite. Spectral features in the post-crest region were shown to correlate with the Ti4+ content. Furthermore, Ti4+ on the M2 trigonal bipyramidal and the adjoining M4 octahedral sites appears to cause variability in the post-crest region as a function of orientation. For this suite of synthetic hibonites it was observed that the pre-edge peak region is not influenced by orientation, but is controlled by Ti3+/ΣTi, site geometry and/or Ti concentration. In particular, the pre-edge peak intensities reflect Ti coordination environment and distortion of the M4 octahedral site. Therefore, although pre-edge peak intensities have previously been used to determine Ti3+/ΣTi in meteoritic minerals, we excluded use of the pre-edge peak intensities for quantifying Ti valence states in hibonite. The energy of the absorption edge at a normalized intensity of 0.8 (E0.8) and the energy of the minimum between the pre-edge region and the absorption edge (Em1) were found to vary systematically with Ti3+/ΣTi. Ti3+/ΣTi in hibonite as a function of Em1 was modeled by a quadratic function that may be used to quantify Ti3

  10. Optimization of the K-edge imaging for vulnerable plaques using gold nanoparticles and energy-resolved photon counting detectors: a simulation study

    PubMed Central

    Alivov, Yahya; Baturin, Pavlo; Le, Huy Q.; Ducote, Justin; Molloi, Sabee

    2014-01-01

    We investigated the effect of different imaging parameters such as dose, beam energy, energy resolution, and number of energy bins on image quality of K-edge spectral computed tomography (CT) of gold nanoparticles (GNP) accumulated in an atherosclerotic plaque. Maximum likelihood technique was employed to estimate the concentration of GNP, which served as a targeted intravenous contrast material intended to detect the degree of plaque's inflammation. The simulations studies used a single slice parallel beam CT geometry with an X-ray beam energy ranging between 50 and 140 kVp. The synthetic phantoms included small (3 cm in diameter) cylinder and chest (33x24 cm2) phantom, where both phantoms contained tissue, calcium, and gold. In the simulation studies GNP quantification and background (calcium and tissue) suppression task were pursued. The X-ray detection sensor was represented by an energy resolved photon counting detector (e.g., CdZnTe) with adjustable energy bins. Both ideal and more realistic (12% FWHM energy resolution) implementations of photon counting detector were simulated. The simulations were performed for the CdZnTe detector with pixel pitch of 0.5-1 mm, which corresponds to the performance without significant charge sharing and cross-talk effects. The Rose model was employed to estimate the minimum detectable concentration of GNPs. A figure of merit (FOM) was used to optimize the X-ray beam energy (kVp) to achieve the highest signal-to-noise ratio (SNR) with respect to patient dose. As a result, the successful identification of gold and background suppression was demonstrated. The highest FOM was observed at 125 kVp X-ray beam energy. The minimum detectable GNP concentration was determined to be approximately 1.06 μmol/mL (0.21 mg/mL) for an ideal detector and about 2.5 μmol/mL (0.49 mg/mL) for more realistic (12% FWHM) detector. The studies show the optimal imaging parameters at lowest patient dose using an energy resolved photon counting detector