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Sample records for polychaete nereis virens

  1. ORGANIC CONTAMINANT DISTRIBUTION IN SEDIMENTS, POLYCHAETES (NEREIS VIRENS) AND THE AMERICAN LOBSTER, HOMARUS AMERICANUS IN A LABORATORY FOOD CHAIN EXPERIMENT

    EPA Science Inventory

    A laboratory experiment was conducted to investigate the transfer of organic contaminants from an environmentally contaminated marine sediment through a simple marine food chain. The infaunal polychaete, Nereis virens, was exposed to contaminated sediment collected from the Passa...

  2. Bioaccumulation kinetics of polybrominated diphenyl ethers from estuarine sediments to the marine polychaete, Nereis virens.

    PubMed

    Klosterhaus, Susan L; Dreis, Erin; Baker, Joel E

    2011-05-01

    Polybrominated diphenyl ethers (PBDEs) are flame-retardant chemicals that have become ubiquitous environmental contaminants. Polybrominated diphenyl ether no-uptake rates from estuarine or marine sediments to deposit-feeding organisms have not yet been reported. In the present study, the marine polychaete worm Nereis virens was exposed to field-contaminated and spiked sediments containing the penta- and deca-BDE commercial mixtures in a 28-d experiment to characterize the relative bioavailability of PBDE congeners from estuarine sediments. A time series sampling regimen was conducted to estimate uptake rate constants. In both field-collected and laboratory-spiked sediment exposures, worms selectively accumulated congeners in the penta-BDE mixture over BDE 209 and other components of the deca-BDE mixture, supporting the prevalence of these congeners in higher trophic level species. Brominated diphenyl ether 209 was not bioavailable to N. virens from field sediment and was only minimally detected in worms exposed to spiked sediments in which bioavailability was maximized. Chemical hydrophobicity was not a good predictor of bioavailability for congeners in the penta-BDE mixture. Direct comparison of bioavailability from the spiked and field sediments for the predominant congeners in the penta-BDE mixture was confounded by the considerable difference in exposure concentration between treatments. Biota-sediment accumulation factors (BSAFs) for N. virens after 28 d of exposure to the field sediment were lower than the BSAFs for Nereis succinea collected from the field site, indicating that 28-d bioaccumulation tests using N. virens may underestimate the in situ concentration of PBDEs in deposit-feeding species. The bioavailability of PBDEs to N. virens indicates that these chemicals can be remobilized from estuarine sediments and transferred to aquatic food webs. PMID:21337608

  3. Metal bioavailability and bioaccumulation in the polychaete Nereis (Alitta) virens (Sars): The effects of site-specific sediment characteristics.

    PubMed

    Pini, J M; Richir, J; Watson, G J

    2015-06-30

    The present study investigates the relationships between copper (Cu) and zinc (Zn) concentrations in sediment, pore water and their bioaccumulation in the polychaete Nereis (Alitta) virens, as well as the importance of site-specific sediment characteristics in that process. Sediment, pore water and N. virens were sampled from seven sites with different pollution histories along the English Channel coast. Results showed that site-specific metal levels and sediment characteristics were important in determining the bioavailability of metals to worms. Significant correlations were found between Cu in the sediment and in the pore water and between Zn in the pore water and in N. virens. Zn from the pore water was thus more readily available from a dissolved source to N. virens than Cu. Data also showed that metal concentrations in N. virens were lower than those found in other closely related polychaetes, indicating that it may regulate tissue concentrations of Cu and Zn. PMID:25935802

  4. Trophic transfer of trace metals from the polychaete worm Nereis diversicolor to the polychaete N. virens and the decapod crustacean Palaemonetes varians

    USGS Publications Warehouse

    Rainbow, P.S.; Poirier, L.; Smith, B.D.; Brix, K.V.; Luoma, S.N.

    2006-01-01

    Diet is an important exposure route for the uptake of trace metals by aquatic invertebrates, with trace metal trophic transfer depending on 2 stages - assimilation and subsequent accumulation by the predator. This study investigated the trophic transfer of trace metals from the sediment-dwelling polychaete worm Nereis diversicolor from metal-rich estuarine sediments in southwestern UK to 2 predators - another polychaete N. virens (Cu, Zn, Pb, Cd, Fe) and the decapod crustacean Palaemonetes varians (Cu, Zn, Pb, Cd, Fe, Ag, As, Mn). N. virens showed net accumulation of Cu, Zn, Pb and Cd from the prey; accumulation increased with increasing prey concentration, but a coefficient of trophic transfer decreased with increasing prey concentration, probably because a higher proportion of accumulated metal in the prey is bound in less trophically available (insoluble) detoxified forms. The trace metal accumulation patterns of P. varians apparently restricted significant net accumulation of metals from the diet of N. diversicolor to just Cd. There was significant mortality of the decapods fed on the diets of metal-rich worms. Metal-rich invertebrates that have accumulated metals from the rich historical store in the sediments of particular SW England estuaries can potentially pass these metals along food chains, with accumulation and total food chain transfer depending on the metal assimilation efficiencies and accumulation patterns of the animal at each trophic level. This trophic transfer may be significant enough to have ecotoxicological effects. ?? Inter-Research 2006.

  5. Exposure to copper and a cytotoxic polyunsaturated aldehyde induces reproductive failure in the marine polychaete Nereis virens (Sars).

    PubMed

    Caldwell, Gary S; Lewis, Ceri; Pickavance, Georgia; Taylor, Rebecca L; Bentley, Matthew G

    2011-07-01

    A number of metabolites from microalgae, including polyunsaturated aldehydes (PUAs), have been implicated as inducers of reproductive failure in aquatic invertebrates. Current work describes the impacts of the model PUA 2E, 4E-decadienal and copper sulphate applied in isolation and combination on the reproductive performance of the infaunal polychaete, Nereis virens (Sars). The reproductive and life cycle parameters investigated were; fertilisation success, larval survival, sperm motility (percent motility and curvilinear velocity) and sperm DNA damage. Exposure to decadienal and copper sulphate in isolation resulted in dose- and time-dependent reductions for each evaluated endpoint. Fertilisation success was heavily impacted at concentrations of up to 10μM for both compounds. Copper sulphate was more toxic in larval survival assays. Sperm motility impacts, although variable, exhibited rapid onset with pronounced reductions in sperm swimming performance observed within 3min of exposure. The extent of DNA damage was dose-dependent, and in the case of decadienal, rapid in onset. Dual compound exposures resulted in enhanced overall toxicity in all assays. Logistic regression analysis of fertilisation and larval survival assays showed significant synergistic interactions between decadienal and copper sulphate; an increase in concentration of either compound resulted in enhanced toxicity of the other. Longer exposure durations during larval survival assays demonstrated a further increase in both toxicity and synergism. The results indicate that the effects of additional environmental stressors must be considered when attempting to extrapolate laboratory-derived single compound exposures to field situations. PMID:21570935

  6. Influence of bioturbation by the amphipod Corophium volutator on fluoranthene uptake in the marine polychaete Nereis virens

    SciTech Connect

    Ciarelli, S.; Kater, B.J.; Straalen, N.M. van

    2000-06-01

    The uptake kinetics of fluoranthene in the polychaete worm Nereis virens were investigated in the presence and in the absence of amphipods to examine the effects of sediment bioturbation by the benthic amphipod Corophium volutator on the uptake in worms. Worms only and worms together with two different densities of amphipods were exposed to fluoranthene-spiked sediment for 12 d. Worms and overlying water samples for fluoranthene analyses were taken and total suspended solids in water column were measured after 1, 2, 5, 8, and 12 d. Results showed that in all treatments fluoranthene was rapidly accumulated by N. virens during the first two days and a steady state was reached within five days of exposure. Biota to sediment accumulation factors normalized to lipid concentration and to sediment organic carbon (BAF{sub ioc}) or worms exposed with the highest number of amphipods were significantly higher (two to three times) compared to worms exposed with fewer or without amphipods after one and two days of exposure. Bioconcentration factors (BCFs), calculated as the ratio between the uptake (k{sub 1}) and elimination (k{sub 2}) rate constants were not significantly different among treatments. When BCFs were calculated on the basis of dissolved fluoranthene concentrations (BCF{sub diss}), values of the treatments where worms were exposed with 100 and 300 amphipods were slightly higher than those calculated on the basis of total (dissolved + particle-bound) aqueous fluoranthene (BCF{sub tot}). However, the presence of fluoranthene bound to dissolved organic matter could have accounted for lower than expected BCF{sub diss} values. The results suggest that bioturbation by amphiopoc, affected the concentration of fluoranthene in the worms not by changing the worm to water partitioning (k{sub 1}/k{sub 2}) but by changing the worm to sediment partitioning (BAF{sub ioc}). In the treatments with worms a higher mortality of amphipods was found compared to those without worms. The

  7. ParaHox gene expression in larval and postlarval development of the polychaete Nereis virens (Annelida, Lophotrochozoa)

    PubMed Central

    Kulakova, Milana A; Cook, Charles E; Andreeva, Tatiana F

    2008-01-01

    Background Transcription factors that encode ANTP-class homeobox genes play crucial roles in determining the body plan organization and specification of different organs and tissues in bilaterian animals. The three-gene ParaHox family descends from an ancestral gene cluster that existed before the evolution of the Bilateria. All three ParaHox genes are reported from deuterostomes and lophotrochozoans, but not to date from any ecdysozoan taxa, and there is evidence that the ParaHox genes, like the related Hox genes, were ancestrally a single chromosomal cluster. However, unlike the Hox genes, there is as yet no strong evidence that the ParaHox genes are expressed in spatial and temporal order during embryogenesis. Results We isolated fragments of the three Nereis virens ParaHox genes, then used these as probes for whole-mount in situ hybridization in larval and postlarval worms. In Nereis virens the ParaHox genes participate in antero-posterior patterning of ectodermal and endodermal regions of the digestive tract and are expressed in some cells in the segment ganglia. The expression of these genes occurs in larval development in accordance with the position of these cells along the main body axis and in postlarval development in accordance with the position of cells in ganglia along the antero-posterior axis of each segment. In none of these tissues does expression of the three ParaHox genes follow the rule of temporal collinearity. Conclusion In Nereis virens the ParaHox genes are expressed during antero-posterior patterning of the digestive system (ectodermal foregut and hindgut, and endodermal midgut) of Nereis virens. These genes are also expressed during axial specification of ventral neuroectodermal cell domains, where the expression domains of each gene are re-iterated in each neuromere except for the first parapodial segment. These expression domains are probably predetermined and may be directed on the antero-posterior axis by the Hox genes, whose

  8. Accumulation of polychlorinated biphenyls from contaminated sediment by Atlantic cod (Gadus morhua): direct accumulation from resuspended sediment and dietary accumulation via the polychaete Nereis virens.

    PubMed

    Ruus, Anders; Daae, Ingrid Aarre; Hylland, Ketil

    2012-11-01

    Bioaccumulation of sediment-associated polychlorinated biphenyls (PCBs) was examined in Atlantic cod (Gadus morhua) through direct diffusion from the sediment (via the water phase) and through the food chain (dietary exposure). To facilitate direct accumulation from the sediment, it was continuously resuspended. To study the dietary bioaccumulation of PCBs, cod were fed benthic polychaetes (Nereis virens) previously exposed to test sediments, which were naturally polluted sediments from the inner Oslofjord (Norway). Both exposure experiments had a duration of 129 d. Furthermore, the role of sediments as a source of PCBs accumulated in Oslofjord cod was elucidated, using results from environmental monitoring as a reference. Generally, the results suggest that the contaminated sediments of the inner Oslofjord are an important source of legacy PCBs for accumulation in resident cod, although additional contributions may also be important. Crude estimates of assimilation efficiency of ingested PCBs (through diet) were found to be 30 to 50%; the highest was for the lower chlorinated congeners (PCB-28 and -52). Challenges for applying trophic magnification factors for determining biomagnification in laboratory experiments, in terms of preventive environmental safety, are indicated. The results provide useful information for parameterization of models describing the behavior of hydrophobic persistent contaminants in the foodweb of the Oslofjord and elsewhere. PMID:22865726

  9. Uptake and excretion of organochlorine pesticides by Nereis virens under normoxic and hypoxic conditions

    SciTech Connect

    Haya, K.; Burridge, L.E.

    1988-02-01

    The marine polychaete worm, Nereis virens, is resistant to organochlorine pesticides. When exposed to each of five pesticides (endosulfan, chlordane, endrin, dieldrin, and DDT) in concentrations ranging from 0.03 mg/L (DDT) to 22.0 mg/L (chlordane), only endosulfan and chlordane killed Nereis. In comparison, the same compounds were much more toxic to another marine invertebrate, Crangon septemspinosa. The authors wondered if the resistance of N. virens to organochlorines was related to their response to hypoxia. N. virens is a sediment dweller often found in intertidal regions and consequently may experience periods of severe oxygen deprivation; varying degrees of hypoxia can initiate a switch to anaerobic energy metabolism. When N. virens encounter hypoxic conditions, they can also exhibit a compensatory ventilation response. In the present study, the authors measured the bioaccumulation of endosulfan, dieldrin, and DDT by N. virens under normoxic and hypoxic conditions.

  10. Interaction between photoperiod and an endogenous seasonal factor in influencing the diel locomotor activity of the benthic polychaete Nereis virens Sars.

    PubMed

    Last, Kim S; Olive, Peter J W

    2004-04-01

    The locomotor activity of Nereis virens Sars associated with food prospecting was investigated in response to photoperiod and season using an actograph. Experimental animals which had been reared under natural photoperiods were exposed to two constant photoperiodic treatments, LD 16:8 and LD 8:16, in both the autumn and winter and in the absence of tidal entrainment. Autocorrelation analysis of rhythmicity showed that during the autumn, animals under the LD 16:8 photoperiod displayed a strong nocturnal rhythm of activity, whereas animals under the LD 8:16 photoperiod showed only a weak nocturnal activity rhythm. This is believed to represent an autumn feeding cessation that is triggered when the animals pass through a critical photoperiod LD(crit) <12:>12. Later in the winter, however, animals exposed to both photoperiodic treatments showed strong rhythms of foraging activity irrespective of the imposed photoperiod. It is suggested that the autumn cessation may maximize the fitness of N. virens, a spring-breeding semelparous organism, by reducing risk during gamete maturation, while spontaneous resurgence of activity after the winter solstice permits animals that are not physiologically competent to spawn to accrue further metabolic reserves. This response is believed to be initiated by a seasonal (possibly circannual) endogenous oscillator or interval timer. PMID:15111365

  11. Vasa, PL10, and Piwi gene expression during caudal regeneration of the polychaete annelid Alitta virens.

    PubMed

    Kozin, Vitaly V; Kostyuchenko, Roman P

    2015-06-01

    Polychaetes are famous for their outstanding ability to regenerate lost body parts. Moreover, these worms possess a number of ancestral features in anatomy, development, and genetics, making them particularly suitable for comparative studies. Thus, fundamental as well as new undisclosed so far features of regenerative processes may be revealed, using polychaetes as a model. In the present work, we aimed to analyze the molecular basis of caudal regeneration in the nereid polychaete Alitta virens (formerly Nereis virens). We focused on homologues genes of RNA helicases Vasa and PL10 and ncRNA-binding proteins Piwi. These markers are suggested to play a significant role in maintenance of undifferentiated state of primordial germ cells and multipotent stem cells across invertebrates. In normal conditions, A. virens homologues of Vasa, PL10, and Piwi were differentially expressed in the subterminal growth zone and germline cells. Caudal amputation induced expression of studied genes de novo, which further accompanies all steps of regeneration. An early appearance of the transcripts in wound epithelium and internal blastemal cells suggests involvement of these genes in the well-known cell dedifferentiation events that assure polychaete regeneration. Provided interpretation of the gene expression dynamics implies the primary restoration of the pygidium and growth zone, which promotes following segment formation. Obtained results are valuable as a molecular fingerprint of the alterations occurring in regulatory state of locally regenerating tissues. PMID:25772273

  12. The accumulation of metals and toxic effects in Nereis virens exposed to pulverised fuel ash.

    PubMed

    Jenner, H A; Bowmer, T

    1992-05-01

    The marine polychaete worm Nereis virens was used to study the bioaccumulation patterns of metal exposures with pulverised fuel ash (PFA). Juvenile N. virens were exposed for 12 weeks to sediments comprised of 100% PFA, 50% PFA-50% clean sand, a reference sediment (contaminated harbour-dredged material) and a clean sand control. Mortality after the first 4 weeks was high at 32-45% in the four sediments. However, this declined to a few percent during the following 8 weeks. Growth expressed as biomass (wet weight) was reduced in bout PFA treatments and the reference sediment. Heavy metal accumulation in the tissues of N. virens was characterised as follows: a group of elements showed negligible to low accumulation (Cd, Cr, Ni, and Zn), As and Cu wich showed a definite, but moderate accumulation: and finally Se, which showed a low accumulation rate, where an uptake equilibrium was not reached after 9 weeks. It is concluded that acute toxic effects did not occur but a population of N. virens inhabiting a PFA dumping site could be affected by high Se concentrations. PMID:24234402

  13. Application of silicone rubber passive samplers to investigate the bioaccumulation of PAHs by Nereis virens from marine sediments.

    PubMed

    Yates, Kyari; Pollard, Pat; Davies, Ian M; Webster, Lynda; Moffat, Colin F

    2011-12-01

    The availability of polycyclic aromatic hydrocarbons (PAHs) from marine sediments to the ragworm (Nereis virens) was studied. Concentrations of PAHs in pore waters were determined using silicone rubber passive samplers. Calculated bioconcentration factors confirmed that partitioning of PAHs between the lipid phase of the polychaetes and pore water is a passive process. Low biota-sediment accumulation factors (BSAF) calculated using total sediment concentration suggested a fraction of the total PAH burden in the sediment may be strongly sorbed to organic carbon and not available to the polychaete. Organic carbon normalised concentrations of the potentially exchangeable fractions of contaminants and freely dissolved concentrations (measured using silicone rubber samplers) provide a better description of the observed bioaccumulation by the ragworms. These data indicate that the concept of availability should be included in environmental risk assessments based upon equilibrium partitioning models, and that silicone rubber samplers can provide the necessary information for these models. PMID:21906858

  14. Novel control and steady-state correction method for standard 28-day bioaccumulation tests using Nereis virens.

    PubMed

    Bennett, Erin R; Steevens, Jeffery A; Lotufo, Guilherme R; Paterson, Gord; Drouillard, Ken G

    2011-06-01

    Evaluation of dredged material for aquatic placement requires assessment of bioaccumulation potentials for benthic organisms using standardized laboratory bioaccumulation tests. Critical to the interpretation of these data is the assessment of steady state for bioaccumulated residues needed to generate biota sediment accumulation factors (BSAFs) and to address control correction of day 0 contaminant residues measured in bioassay organisms. This study applied a novel performance reference compound approach with a pulse-chase experimental design to investigate elimination of a series of isotopically labeled polychlorinated biphenyl ((13)C-PCBs) in the polychaete worm Nereis virens while simultaneously evaluating native PCB bioaccumulation from field-collected sediments. Results demonstrated that all (13)C-PCBs, with the exception of (13)C-PCB209 (> 80%), were eliminated by more than 90% after 28 d. The three sediment types yielded similar (13)C-PCB whole-body elimination rate constants (k(tot)) producing the following predictive equation: log k(tot)  =  - 0.09 × log K(OW)  - 0.45. The rapid loss of (13)C-PCBs from worms over the bioassay period indicated that control correction, by subtracting day 0 residues, would result in underestimates of bioavailable sediment residues. Significant uptake of native PCBs was observed only in the most contaminated sediment and proceeded according to kinetic model predictions with steady-state BSAFs ranging from 1 to 3 and peaking for congeners of log K(OW) between 6.2 and 6.5. The performance reference compound approach can provide novel information about chemical toxicokinetics and also serve as a quality check for the physiological performance of the bioassay organism during standardized bioaccumulation testing. PMID:21381091

  15. The polychaete worm Nereis diversicolor increases mercury lability and methylation in intertidal mudflats.

    PubMed

    Sizmur, Tom; Canário, João; Edmonds, Samuel; Godfrey, Adam; O'Driscoll, Nelson J

    2013-08-01

    The polychaete worm Nereis diversicolor engineers its environment by creating oxygenated burrows in anoxic intertidal sediments. The authors carried out a laboratory microcosm experiment to test the impact of polychaete burrowing and feeding activity on the lability and methylation of mercury in sediments from the Bay of Fundy, Canada. The concentration of labile inorganic mercury and methylmercury in burrow walls was elevated compared to worm-free sediments. Mucus secretions and organic detritus in worm burrows increased labile mercury concentrations. Worms decreased sulfide concentrations, which increased Hg bioavailability to sulfate-reducing bacteria and increased methylmercury concentrations in burrow linings. Because the walls of polychaete burrows have a greater interaction with organisms, and the overlying water, the concentrations of mercury and methylmercury they contain is more toxicologically relevant to the base of a coastal food web than bulk samples. The authors recommend that researchers examining Hg in marine environments account for sediment dwelling invertebrate activity to more fully assess mercury bioavailability. PMID:23633443

  16. Environmental effects of dredging. A chronic sublethal sediment bioassay with the marine polychaete nereis (Neanthes) arenaceodentata

    SciTech Connect

    Dillon, T.M.; Moore, D.W.; Bridges, T.S.

    1995-01-01

    This note provides a general overview of a new 28-day chronic sublethal sediment bioassay designed for the regulatory evaluation of dredged material. The bioassay uses survival and growth rate endpoints with the polychaete Nereis (Neanthes) arenaceodentata. The primary technical reference for this new bioassay is Dillon, Moore, and Reish (in press), upon which this overview is based. Sediment bioassays are used to assess the aggregate toxicity of sediment associated anthropogenic chemicals. Historically, these bioassays have measured survival of highly sensitive species following acute exposures (10 days). A new generation of sediment bioassays is being developed in which the subtle, sublethal response of test species is measured following chronic sediment exposures (Dillon 1993).

  17. The effects of the polychaete Nereis diversicolor on the distribution and transplanting success of Zostera noltii

    NASA Astrophysics Data System (ADS)

    Hughes, R. G.; Lloyd, D.; Ball, L.; Emson, D.

    2000-07-01

    Loss of saltmarsh vegetation in south-east England is a significant problem for conservation and coastal defence. The losses of vegetation began in the 1930s with the loss of intertidal Zostera marina and have continued more recently. Some preliminary trials at re-establishing Zostera in some estuaries of Essex have not been successful. This paper addresses the hypothesis that the infauna, particularly the polychaete Nereis diversicolor, may restrict natural colonisation by Zostera and reduce the success of transplanting trials. In field experiments, Z. noltii were transplanted into areas where Nereis were common, close to an established seagrass bed and into two other estuaries. The transplants protected from the effects of the polychaetes by netting had a higher survival rate, lower index of root damage and greater biomass at the end of the experiments than those that were unprotected. In laboratory experiments, Nereis reduced the survival of Z. noltii. They were observed grasping the leaves and pulling them into their burrows. These results indicate that herbivory and disturbance by N. diversicolor is responsible, at least in part, for the restriction of the distribution of Z. noltii and may have been important in limiting the success of previous transplanting experiments. A hypothesis is proposed which states that there are two stable states on the upper mud-flats. One state is dominated by plants, including Zostera spp., which prevent colonisation by burrowing infauna, and the other is dominated by infauna which prevent colonisation by plants. Managing these two states could be the key to re-establishing the early successional stages of saltmarsh development.

  18. Uptake pathways and subcellular fractionation of Cd in the polychaete Nereis diversicolor.

    PubMed

    Li, Lianzhen; Liu, Xiaoli; You, Liping; Zhang, Linbao; Zhao, Jianmin; Wu, Huifeng

    2012-01-01

    Polychaetes have often been utilized as indicator species to investigate the impacts of pollutants, such as heavy metals. The uptake of Cd by the polychaete Nereis diversicolor was determined at varying Ca concentrations and with pre-exposure to Ca ion channel blockers and metabolic inhibitors in simulated sea water over 1 week period. The supply of Ca in simulated sea water inhibited Cd uptake and increased Ca concentration in N. diversicolor after 10 μM Cd exposure. Pre-exposure to a Ca-channel blocker (Lanthanum) significantly inhibited Cd uptake, suggesting that the uptake of Cd was exerted at a Ca channel. N-ethylmaleimide, which specifically binds to sulfhydryl groups, inhibited Cd uptake at 10 μM, implying that the transport of Cd is carrier-mediated by proteins or other SH-containing compounds. Subcellular Cd distribution analysis showed that more than 60% of the total Cd associated with the cytosolic fraction. The presence of higher concentration of Ca in simulated sea water did not impact the proportional subcellular distribution of Cd in N. diversicolor. Nevertheless, the supply of Ca could significantly lower Cd concentration in cytosol and cellular debris. The present study provides evidence that Cd transport by N. diversicolor was mediated mainly through lanthanum- sensitive Ca ion channels and accumulated by SH-containing compounds. These results help to understand the uptake mechanism and subcellular distribution of Cd in polychaetes. PMID:21858512

  19. Toxicity and bioaccumulation of sediment-associated silver nanoparticles in the estuarine polychaete, Nereis (Hediste) diversicolor.

    PubMed

    Cong, Yi; Banta, Gary T; Selck, Henriette; Berhanu, Deborah; Valsami-Jones, Eugenia; Forbes, Valery E

    2014-11-01

    In this study, the toxicities of sediment-associated silver added to sediment as commercially available silver nanoparticles (Ag NPs, 20 and 80 nm) and aqueous Ag (AgNO3) to the estuarine polychaete, Nereis (Hediste) diversicolor, were investigated for both individual and subcellular endpoints after 10 d of exposure. Both Ag NP types were characterized in parallel to the toxicity studies and found to be polydispersed and overlapping in size. Burrowing activity decreased (marginally) with increasing Ag concentration and depended on the form of Ag added to sediment. All worms accumulated Ag regardless of the form in which it was added to the sediment, and worm size (expressed as dry weight) was found to significantly affect bioaccumulation such that smaller worms accumulated more Ag per body weight than larger worms. Lysosomal membrane permeability (neutral red retention time, NRRT) and DNA damage (comet assay tail moment and tail DNA intensity %) of Nereis coelomocytes increased in a concentration-dependent manner in all three Ag treatments. Ag NP treatments were more toxic than aqueous Ag for all toxicity endpoints, even though bioaccumulation did not differ significantly among Ag forms. No significant difference in toxicity was observed between the two Ag NP treatments which was attributed to their overlap in particle size. PMID:25179147

  20. Chronic toxicity of phenanthrene to the marine polychaete worm, Nereis (Neanthes) arenaceodentata

    SciTech Connect

    Emery, V.L. Jr.; Dillon, T.M.

    1996-02-01

    Polycyclic aromatic hydrocarbons (PAHs) are widely distributed in the environment. While environmental concentrations are generally below acutely, lethal levels, chronic, low level exposures may result in subtle sublethal effects. PAHs accumulate in bottom sediments and may represent a hazard to the benthos. Polychaetes are important members of this community. The objective of this study is to evaluate the chronic sublethal effects of one PAH, phenanthrene (PHN), on the polychaete worm, Nereis arenaceodentata. PHN was selected because of its high toxicity to marine invertebrates relative to other PAHs. The response of bivalves to heavy metals and other toxins has usually been determined by observing valve position. Since mussels close their valves to avoid noxious stimuli, experimental delivery of chemicals is uncertain. To obtain constant results. Preston employed plastic spacers to hold the valves apart. This obviates the observation of valve position as an index of response, and some other method is required. Electromyography of intact mussels is one such index, and is shown to be a simple, effective and quantitative measurement of activity. Experiments are reported on the effects of added mercury on salt water and fresh water species. Parts of this Nvork have appeared in brief form.

  1. Toxic effects and bioaccumulation of nano-, micron- and ionic-Ag in the polychaete, Nereis diversicolor.

    PubMed

    Cong, Yi; Banta, Gary T; Selck, Henriette; Berhanu, Deborah; Valsami-Jones, Eugenia; Forbes, Valery E

    2011-10-01

    There is increasing concern about the toxicities and potential risks, both still poorly understood, of silver nanoparticles for the aquatic environment after their eventual release via wastewater discharges. In this study, the toxicities of sediment associated nano (<100 nm)-, micron (2-3.5 μm)- and ionic (AgNO(3))-Ag on the sediment-dwelling polychaete, Nereis diversicolor, were compared after 10 days of sediment exposure, using survival, DNA damage (comet assay) and bioaccumulation as endpoints. The nominal concentrations used in all exposure scenarios were 0, 1, 5, 10, 25, and 50 μg Ag/g dry weight (dw) sediment. Our results showed that Ag was able to cause DNA damage in Nereis coelomocytes, and that this effect was both concentration- and Ag form-related. There was significantly greater genotoxicity (higher tail moment and tail DNA intensities) at 25 and 50 μg/g dw in nano- and micron-Ag treatments and at 50 μg/g dw in the ionic-Ag treatment compared to the controls (0μg/g dw). The nano-Ag treatment had the greatest genotoxic effect of the three tested Ag forms, and the ionic-Ag treatment was the least genotoxic. N. diversicolor did accumulate sediment-associated Ag from all three forms. Ag body burdens at the highest exposure concentration were 8.56 ± 6.63, 6.92 ± 5.86 and 9.86 ± 4.94 μg/g dw for worms in nano-, micron- and ionic-Ag treatments, respectively, but there was no significant difference in Ag bioaccumulation among the three treatments. PMID:21831346

  2. Joint toxicity of sediment-associated DDT and copper to a polychaete, Nereis succinea.

    PubMed

    Wang, Fei; Qi, Hong-Xue; You, Jing

    2015-03-01

    As major components in antifouling paints, both dichlorodiphenyltrichloroethane (DDT) and copper are ubiquitous in estuarine sediment and have been detected at high concentrations in the harbors in South China. In the present study joint toxicity between DDT and copper to an estuarine polychaete, Nereis succinea, was examined using bioaccumulation potential, growth impairment and change in lipid peroxidation contents as sub-lethal endpoints. In general, the toxicity of DDXs (DDT and its metabolites) and copper acted independently and copper was more toxic to the lugworms at environmentally relevant concentrations. Nevertheless, co-exposure to copper led to a significant reduction in the bioaccumulation of DDXs when the concentrations of DDXs in sediment were high. The inhibition of DDX bioaccumulation by copper may be partially explained by the decrease in the bioavailability of sediment-associated DDXs which were estimated by biomimetic gut fluid extraction. The saturation of the solubilization agents or the inhibition of protease activity in gut fluid of N. succinea by copper limited the DDX bioavailability and the subsequent bioaccumulation. PMID:25424350

  3. Development and maturation in the nereidid polychaetes Platynereis dumerilii and Nereis succinea exposed to xenoestrogens.

    PubMed

    García-Alonso, J; Ayoola, J A O; Crompton, J; Rebscher, N; Hardege, J D

    2011-09-01

    Few studies link biochemical, cellular and whole animal effects of toxic compounds with growth and reproductive output on invertebrate model organisms. Thus, we explore the effects of xenoestrogens on nereid worms. Larvae of Platynereis dumerilii exposed to estradiol (E(2)) ethynylestradiol (EE(2)) and nonyplhenol (NP) observing the effects on growth, primordial germ cell (PGC) proliferation and maturation. In addition, a single exposure study was performed with a 50 days latency period on adult worms of Nereis succinea. Since reduced glutathione (GSH) is required in detoxification of NP and is the precursor of the spawning pheromone nereithione (CSSG) in N. succinea, we analysed how the estrogenic chemical NP affects GSH concentrations. PGC were not affected by exposure to E(2) and EE(2) from 24hpf to 6 days. Chronic exposure of P. dumerilii with NP over the full life cycle did not influence segment proliferation. Mature females that developed, even at high concentrations, were able to spawn and successful fertilization occurred. However, at high NP levels no P. dumerilii males matured. A significant decline of GSH can be seen in N. succinea males upon treatment with NP, but not in females, indicating that females stabilize GSH levels even in stress situations. This study shows some results that link the foundation to causally integrate toxic exposure to xenoestrogens with development, growth and reproductive outputs in nereidid polychaetes. PMID:21642012

  4. Bioaccumulation kinetics of sediment-associated DE-83 in benthic invertebrates (Nereis succinea, polychaete).

    PubMed

    Tian, Shengyan; Zhu, Lingyan

    2011-06-01

    Polychaetes (Nereis succinea) were exposed to DE-83 contaminated sediments to investigate the bioaccumulation and bioavailability of nona- and deca-BDEs in sediment. All the major congeners in DE-83 were bioavailable to the lugworms. The uptake coefficients (K(s)) of nona- and deca-BDE congeners in lugworms were in the range of 0.18-0.65 (d(-1)), with the values of BDE-207 and -208 slightly higher than those of BDE-206 and -209. Elimination of nona- and deca-BDE congeners from lugworms was very fast. The estimated half-lives of nona- and deca-BDE congeners in the lugworms were at 0.7d. The bioavailability of nona- and deca-BDE congeners was very low, with BSAF of 0.017 for BDE-206 and -209 and 0.054 for BDE-207 and -208. These may be due to the large molecular size and high affinity of PBDEs to sediment particles. The contribution of BDE-206 in the profile of nona-BDEs in lugworm tissue decreased with exposure time while those of BDE-207 and -208 increased, which could be the result of the biotransformation of BDE-209 to BDE-207 and -208. PMID:21356541

  5. Accumulation and elimination of14C-γ-HCH (lindane) in Nereis virens (Polychaeta) with consideration of metabolites

    NASA Astrophysics Data System (ADS)

    Goerke, H.; Ernst, W.

    1980-03-01

    In two experiments, conducted at 6° and 16 °C, 43 Nereis virens were exposed to14C-labelled γ-HCH (lindane) at a concentration of 1 µg/l, which was maintained by intermittent monitoring and redosing. A closed system with individuals living in glass tubes was used. At equilibrium and during the subsequent phase of elimination, both γ-HCH and metabolites were determined in individual worms as well as in the water and faeces throughout the entire experiment. The bioconcentration factors of γ-HCH were 480 and 440 at 6° and 16 °C, respectively; those based on total radioactivity were 500 and 410. These factors were in the upper range of those known for other aquatic animals. The elimination may be described by an exponential function. The initial 50% decrease of γ-HCH and γ-HCH+metabolites in the worms occurred at both temperatures in 2 and 3 days, respectively. The percentage of γ-HCH metabolites in worms increased considerably during the elimination period. At least four metabolites were detected in worms and water. If pollutants are evaluated by accumulation and elimination kinetics, metabolization has to be taken into account.

  6. Impact of polychaetes (Nereis spp. and Arenicola marina) on carbon biogeochemistry in coastal marine sediments†

    PubMed Central

    Kristensen, Erik

    2001-01-01

    Known effects of bioturbation by common polychaetes (Nereis spp. and Arenicola marina) in Northern European coastal waters on sediment carbon diagenesis is summarized and assessed. The physical impact of irrigation and reworking activity of the involved polychaete species is evaluated and related to their basic biology. Based on past and present experimental work, it is concluded that effects of bioturbation on carbon diagenesis from manipulated laboratory experiments cannot be directly extrapolated to in situ conditions. The 45–260% flux (e.g., CO2 release) enhancement found in the laboratory is much higher than usually observed in the field (10–25%). Thus, the faunal induced enhancement of microbial carbon oxidation in natural sediments instead causes a reduction of the organic matter inventory rather than an increased release of CO2 across the sediment/water interface. The relative decrease in organic inventory (Gb/Gu) is inversely related to the relative increase in microbial capacity for organic matter decay (kb/ku). The equilibrium is controlled by the balance between organic input (deposition of organic matter at the sediment surface) and the intensity of bioturbation. Introduction of oxygen to subsurface sediment and removal of metabolites are considered the two most important underlying mechanisms for the stimulation of carbon oxidation by burrowing fauna. Introduction of oxygen to deep sediment layers of low microbial activity, either by downward irrigation transport of overlying oxic water or by upward reworking transport of sediment to the oxic water column will increase carbon oxidation of anaerobically refractory organic matter. It appears that the irrigation effect is larger than and to a higher degree dependent on animal density than the reworking effect. Enhancement of anaerobic carbon oxidation by removal of metabolites (reduced diffusion scale) may cause a significant increase in total sediment metabolism. This is caused by three possible

  7. Nereis alacranensis, a new species of polychaete (Annelida, Nereididae) from Alacranes Reef, southern Gulf of Mexico, with a key to Nereis from the Grand Caribbean.

    PubMed

    Ramírez Hernández, Adriana; Hernández-Alcántara, Pablo; Solís-Weiss, Vivianne

    2015-01-01

    A new species of polychaete, Nereis alacranensis n. sp., was found in dead coral rocks in the intertidal zone of Alacranes reef, southern Gulf of Mexico. N. alacranensis n. sp. can be included in a group of nereidids characterized by the absence of paragnaths in areas I and V of the pharynx, the presence of cones in a single row or absent in areas VII-VIII, and short blades in notopodial homogomph falcigers. The new species can be separated from the other species of the group by the presence of 3-7 cones in area VI and 7 cones arranged in a row in areas VII-VIII, finely dentate blades in notopodial homogomph falcigers, but most of all, by the presence of an unusual brown coarse arc shaped plate on the external ventral region of the peristomium. This structure has not yet been reported, at least in this genus. A taxonomic key of the species of Nereis recorded from the Grand Caribbean region is included. PMID:26623850

  8. Development of a chronic sublethal bioassay for evaluating contaminated sediment with the marine polychaete worm Nereis (Neanthes) arenaceodentata

    SciTech Connect

    Dillon, T.M.; Moore, D.W.; Gibson, A.B. )

    1993-03-01

    Development of a chronic sublethal sediment bioassay with the polychaete Nereis (Neanthes) arenaceodentata is described. The sublethal test end point was estimated individual somatic growth rate. The test was initiated with two-to three-week-old post-emergent juvenile worms and continued for 28 d. The potential bias due to selected nontreatment factors on polychaete survival and growth was evaluated. For example, grain size has no significant effect, whereas the number of worms placed in each exposure vessel was critical. Direct transfer from 30[per thousand] seawater to salinites [<=] 15[per thousand] had a highly significant and adverse effect on survival and growth. Both survival and growth of juvenile worms may be adversely affected if test conditions involve exposures to [>=] 0.7 mg/L un-ionized ammonia or [>=] 5 mg/L hydrogen sulfide. Survival of juvenile worms to concentrations of the reference toxicant, cadmium chloride, approximating the 96-h LC50 (5 mg/L) was used as a quality control measure. Results are expressed in control chart format analogous to methods used in analytical chemistry.

  9. The regulation of copper stress response genes in the polychaete Nereis diversicolor during prolonged extreme copper contamination.

    PubMed

    McQuillan, Jonathan S; Kille, Peter; Powell, Kate; Galloway, Tamara S

    2014-11-18

    Polychaetes are frequented in toxicological studies, one reason being that some members occupy shallow burrows in sediments and are maximally exposed to the contaminants that accumulate within them. We have been studying one population of the polychaete Nereis (Hediste) diversicolor exhibiting inheritable tolerance to extreme copper contamination in estuarine sediment. Using transcriptome sequencing data we have identified a suite of genes with putative roles in metal detoxification and tolerance, and measured their regulation. Copper tolerant individuals display significantly different gene expression profiles compared to animals from a nearby population living without remarkable copper levels. Gene transcripts encoding principle copper homeostasis proteins including membrane copper ion transporters, copper ion chaperones and putative metallothionein-like proteins were significantly more abundant in tolerant animals occupying contaminated sediment. In contrast, those encoding antioxidants and cellular repair pathways were unchanged. Nontolerant animals living in contaminated sediment showed no difference in copper homeostasis-related gene expression but did have significantly elevated levels of mRNAs encoding Glutathione Peroxidase enzymes. This study represents the first use of functional genomics to investigate the copper tolerance trait in this species and provides insight into the mechanism used by these individuals to survive and flourish in conditions which are lethal to their conspecifics. PMID:25337783

  10. Smelling Danger – Alarm Cue Responses in the Polychaete Nereis (Hediste) diversicolor (Müller, 1776) to Potential Fish Predation

    PubMed Central

    Schaum, C. Elisa; Batty, Robert; Last, Kim S.

    2013-01-01

    The harbour ragworm, Nereis (Hediste) diversicolor is a common intertidal marine polychaete that lives in burrows from which it has to partially emerge in order to forage. In doing so, it is exposed to a variety of predators. One way in which predation risk can be minimised is through chemical detection from within the relative safety of the burrows. Using CCTV and motion capture software, we show that H. diversicolor is able to detect chemical cues associated with the presence of juvenile flounder (Platichthys flesus). Number of emergences, emergence duration and distance from burrow entrance are all significantly reduced during exposure to flounder conditioned seawater and flounder mucous spiked seawater above a threshold with no evidence of behavioural habituation. Mucous from bottom-dwelling juvenile plaice (Pleuronectes platessa) and pelagic adult herring (Clupea harengus) elicit similar responses, suggesting that the behavioural reactions are species independent. The data implies that H. diversicolor must have well developed chemosensory mechanisms for predator detection and is consequently able to effectively minimize risk. PMID:24155953

  11. Smelling danger - alarm cue responses in the polychaete Nereis (Hediste) diversicolor (Müller, 1776) to potential fish predation.

    PubMed

    Schaum, C Elisa; Batty, Robert; Last, Kim S

    2013-01-01

    The harbour ragworm, Nereis (Hediste) diversicolor is a common intertidal marine polychaete that lives in burrows from which it has to partially emerge in order to forage. In doing so, it is exposed to a variety of predators. One way in which predation risk can be minimised is through chemical detection from within the relative safety of the burrows. Using CCTV and motion capture software, we show that H. diversicolor is able to detect chemical cues associated with the presence of juvenile flounder (Platichthys flesus). Number of emergences, emergence duration and distance from burrow entrance are all significantly reduced during exposure to flounder conditioned seawater and flounder mucous spiked seawater above a threshold with no evidence of behavioural habituation. Mucous from bottom-dwelling juvenile plaice (Pleuronectes platessa) and pelagic adult herring (Clupea harengus) elicit similar responses, suggesting that the behavioural reactions are species independent. The data implies that H. diversicolor must have well developed chemosensory mechanisms for predator detection and is consequently able to effectively minimize risk. PMID:24155953

  12. Comparison of marine sediment toxicity test protocols for the amphipod Rhepoxynius abronius and the polychaete worm Nereis (Neanthes) arenaceodentata

    SciTech Connect

    Anderson, B.S.; Hunt, J.W.; Phillips, B.M. |

    1998-05-01

    The 10-d amphipod survival toxicity test protocol using Rhepoxynius abronius was compared to the 20-d polychaete worm growth and survival protocol using Nereis (Neanthes) arenaceodentata. Of the 341 sediment samples collected in California and tested over a 2-year period. 78% significantly inhibited R. abronius survival, whereas 2 and 26% significantly inhibited N. arenaceodentata survival and biomass, respectively. Statistical power associated with each protocol endpoint was determined by calculating the minimum significant difference (MSD) for each test protocol for this data set. The 90th percentile MSDs for R. abronius survival and N. arenaceodentata survival and biomass were 16, 36, and 56%, respectively. Survival of R. abronius was significantly negatively correlated with a number of toxicants including metals, pesticides, polycyclic aromatic hydrocarbons, and polychlorinated biphenyls. No significant correlations were determined between N. arenaceodentata survival or biomass and contaminants measured. Amphipod survival was also negatively correlated with sediment total organic carbon and grain size, but when samples with a high percent fine grain size (>90% fines) were eliminated from consideration, the overall conclusions of the study were not altered. The 10-d amphipod survival protocol using R. abronius was a more sensitive indicator of toxicity, but the results indicate that this was due to greater statistical power rather than greater sensitivity of the test organisms or endpoints.

  13. Comparison of the ecological energetics of the polychaetes capitella capitata and nereis succinea in experimental systems receiving similar levels of detritus

    NASA Astrophysics Data System (ADS)

    Tenore, K. R.

    The ecological energetics, including specific growth rate, population production and trophic transfer, was measured for the polychaetes Capitella capitata and Nereis succinea in laboratory systems receiving similar detritus food rations (1500 mg C · m -2 · d -1). The opportunistic Capitella species more effectively exploited the available food because of a higher specific growth rate and a higher population density. The metabolic cost was high (production : respiration 0.66, versus 2.50 for Nereis), but a greater proportion of the available detritus went into production in Capitella (trophic transfer efficiency is the ratio between worm production and food supplied; 27% for Capitella and 3% for Nereis). Opportunistic species such as Capitella capitata can exploit high organic conditions as in these laboratory growth studies. They effectively exploit not only by fast population increase when food levels increase, but also by achieving high population densities. The more typical, larger, benthic deposit feeders, such as Nereis succinea, not only have a shower population response to increasing food, but behavioural interactions due to crowding ( i.e., increased mortality) may limit population density to levels that do not maximally exploit available food.

  14. A statistical study of environmental factors controlling concentrations of heavy metals in the burrowing bivalve Scrobicularia plana and the polychaete Nereis diversicolor

    NASA Astrophysics Data System (ADS)

    Luoma, Samuel N.; Bryan, G. W.

    1982-07-01

    Multiple regression analyses indicate that the most important factors controlling Ag, Cd, Co, Cu, Pb and Zn concentrations in the estuarine bivalve Scrobicularia plana and the polychaete Nereis diversicolor are the concentrations of these metals in surface sediments and the partitioning of sediment-bound metals between different sediment constituents. Extraction of the sediments with 1-N HCl provides more information about the bioavailability of the metals than do extractions with five other techniques. Biologically available Cd and Co in solution contribute significantly to Cd and Co concentrations in both Scrobicularia and Nereis. Concentrations of Ag in Scrobicularia are reduced where Cu concentrations in sediments are high. An unexplained increase in concentrations of Cu in Scrobicularia at specific stations in six estuaries suggests that under certain very anoxic conditions the availability of copper may be exceptionally high.

  15. Long-term incubation of adult Nereis virens (Annelida: Polychaeta) in copper-spiked sediment: the effects on adult mortality, gametogenesis, spawning and embryo development.

    PubMed

    Watson, G J; Pini, J; Leach, A; Fones, G

    2013-03-15

    Late gametogenic Nereis virens were incubated for up to 2.5 months in environmentally relevant concentrations of copper-spiked sediment. Sequential extraction confirmed that much more labile copper (in actual and percentage terms) was present as spiked concentrations increased, although the residual fractions contained similar amounts across concentrations. This is also reflected in the tissue concentration of the worms which increased in line with the sediment concentrations. Adult mortality was not dependent on the exposure time, but higher concentrations usually induced greater mortality for both sexes. Oocytes were significantly smaller at higher concentrations although pairwise comparisons did not show specific differences. Spawning of males occurred a number of days earlier in the higher concentrations. Differences in the number of embryos developing normally after in vitro fertilizations of oocytes fertilized with sperm from exposed males and non-exposed males showed that sperm were more susceptible to toxicity, but oocytes were also affected at the highest concentration. These results show that there are direct and indirect reproductive consequences of parental exposure to copper with implications for recruitment and subsequent colonization of polluted sediments for this ecologically and commercially important species. PMID:23261667

  16. Conditioned water affects pair formation behaviour in the marine polychaete Neanthes (Nereis) acuminata.

    PubMed

    Storey, Ellen J; Reish, Don J; Hardege, Jörg D

    2013-01-01

    Assessing cues from conspecifics is paramount during mate choice decisions. Neanthes acuminata is a marine polychaete with a unique life cycle: pair formation, female death following reproduction, male parental care and male ability to mate again after egg care. Males completing such egg care are 'experienced'. Females have been shown to prefer experienced males over all others, including aggressively dominant males. As the female dies following reproduction, the reproductive success of her offspring depends upon successful parental care by the male. It is therefore vital that the female makes a good mate choice decision. This paper shows that the use of conditioned water from males caring for eggs and newly experienced males caused the female to alter her choice to a previously undesired male. However, conditioned water from males, which had reproduced but were isolated for 2 weeks, did not have the same effect on pairing behaviour. This indicates that the smell of experience is short lived. PMID:22941305

  17. Cellular internalization of silver nanoparticles in gut epithelia of the estuarine polychaete Nereis diversicolor.

    PubMed

    García-Alonso, Javier; Khan, Farhan R; Misra, Superb K; Turmaine, Mark; Smith, Brian D; Rainbow, Philip S; Luoma, Samuel N; Valsami-Jones, Eugenia

    2011-05-15

    Silver nanoparticles (AgNPs) are widely used which may result in environmental impacts, notably within aquatic ecosystems. As estuarine sediments are sinks for numerous pollutants, but also habitat and food for deposit feeders such as Nereis diversicolor, ingested sediments must be investigated as an important route of uptake for NPs. N. diversicolor were fed sediment spiked with either citrate capped AgNPs (30 ± 5 nm) or aqueous Ag for 10 days. Postexposure AgNPs were observed in the lumen of exposed animals, and three lines of evidence indicated direct internalization of AgNPs into the gut epithelium. With TEM, electron-dense particles resembling AgNPs were observed associated with the apical plasma membrane, in endocytotic pits and in endosomes. Energy dispersive X-ray analysis (EDX) confirmed the presence of Ag in these particles, which were absent in controls. Subcellular fractionation revealed that Ag accumulated from AgNPs was predominantly associated with inorganic granules, organelles, and the heat denatured proteins; whereas dissolved Ag was localized to the metallothionein fraction. Collectively, these results indicate separate routes of cellular internalization and differing in vivo fates of Ag delivered in dissolved and NP form. For AgNPs an endocytotic pathway appears to be a key route of cellular uptake. PMID:21517067

  18. Implications for oxygen, nutrient fluxes and denitrification rates during the early stage of sediment colonisation by the polychaete Nereis spp. in four estuaries

    NASA Astrophysics Data System (ADS)

    Nizzoli, Daniele; Bartoli, Marco; Cooper, Martin; Welsh, David T.; Underwood, Graham J. C.; Viaroli, Pierluigi

    2007-10-01

    In this work, bioturbation effects by the polychaete Nereis spp. on oxygen demand, denitrification and solute fluxes in four European coastal areas (Goro lagoon in Italy, Tagus estuary in Portugal, Colne estuary in England and Tjärnö bay in Sweden) are compared. The studied areas are very heterogeneous with respect to tidal regimes, primary producers communities, sediment composition and organic matter content and nutrient concentrations in the water column. At each site, with the same methodological approach, undisturbed sediment cores and cores with different numbers of polychaetes added were incubated in the dark. Oxygen, inorganic nutrients (NH 4+, NO 3-, Dissolved Reactive Silica-SiO 2 and Soluble Reactive Phosphorous-SRP) fluxes and coupled-uncoupled denitrification rates were quantified on the same set of cores. Nereis bioturbation had a considerable effect on biogeochemical processes and, at all sites, resulted in an immediate stimulation (from 1.5- to 4-fold higher) of oxygen and ammonium fluxes between the sediment and the water column; on the contrary bioturbation had site specific effects on reactive silica and phosphorus fluxes. Bioturbation also stimulated denitrification of water column nitrate ( Dw, from 1.3 to 3 times higher than in control sediments); this process removed a major fraction (>50%) of the nitrogen lost through denitrification. Overall, the strong relationship between benthic macrofauna activity and sediment biogeochemistry is confirmed by this study. Comparison of the relative stimulation of processes in different geographical areas reveals that the degree by which processes and fluxes (intensity and direction) are affected are site specific and influenced by initial macrofauna densities and sediment and water chemistry.

  19. DIVERGENCE BETWEEN POPULATIONS OF A MONOGAMOUS POLYCHAETE WITH MALE PARENTAL CARE: PREMATING ISOLATION AND CHROMOSOME VARIATION

    EPA Science Inventory

    Low dispersal and sexual selection are characteristic of the coastal polychaete Nereis acuminata Ehlers 1868 [also known as Nereis arenaceodentata Moore 1903 and Nereis (Neanthes) caudata elle Chiaje 1841]. e assessed levels of premating isolation between populations of this poly...

  20. Factors in the distribution of intertidal, estuarine polychaetes: a field experiment with Nereis (Hediste) diversicolor and Nephtys hombergi in the Tamar at Plymouth

    NASA Astrophysics Data System (ADS)

    Davey, J. T.; George, C. L.

    1986-05-01

    A field experiment was conducted over 10 weeks from July to mid-September, 1984, on a mudflat in the lower reaches of the Tamar Estuary at Plymouth, to test the relative importance of environmental factors and species interactions in controlling the distribution of two polychaete species. Nereis (Hediste) diversicolor from an upper shore site were transplanted into a lower shore site nearby which was characterized by the presence of Nephtys hombergi. 65-71% of N. diversicolor which were transplanted in their own sediments, with no contact with N. hombergi, survived the experimental period. The appearance of some small stages of N. diversicolor in these treatments was attributed in part to recruitment from the overlying water. N. diversicolor transplanted directly into N. hombergi-sediment survived in inverse proportion to their numbers and only the lowest densities (equivalent to 480 m -2) survived as well as those in their own sediment. Given the choice to invade the other species' sediment, more N. hombergi than N. diversicolor finally made the change, and there was some evidence that the smallest N. diversicolor suffered predation in consequence. Otherwise there was little evidence for inter-species interaction. There appeared to be some disruption of oocyte maturation of the N. diversicolor which may have been due to changes in tidal rhythm and salinity at the experimental site.

  1. The marine myxosporean Sigmomyxa sphaerica (Thélohan, 1895) gen. n., comb. n. (syn. Myxidium sphaericum) from garfish (Belone belone (L.)) uses the polychaete Nereis pelagica L. as invertebrate host.

    PubMed

    Karlsbakk, Egil; Køie, Marianne

    2012-01-01

    Sigmomyxa sphaerica (Thélohan, 1892) gen. n. (Myxozoa, Myxosporea) with myxosporean stages in the gall bladder of Belone belone (L.) (Teleostei, Belonidae) uses the polychaete Nereis pelagica L. (Nereidae) from shallow water in the northern Øresund, Denmark, as invertebrate host. The nearly spherical tetractinomyxon-type actinospores of S. sphaerica differ from those of two species of Ellipsomyxa which also use Nereis spp. as invertebrate host. Pansporocysts of S. sphaerica were not seen. S. sphaerica is redescribed on the basis of myxospore stages from B. belone and actinospores from N. pelagica, and the phylogenetic affinities examined on the basis of ribosomal small subunit gene sequences. S. sphaerica is closest related to Ellipsomyxa spp., and is not congeneric with morphologically similar Myxidium spp. from gadids. This is the fifth elucidated two-host life cycle of a marine myxozoan. PMID:21674297

  2. Biotransformation of dichlorodiphenyltrichloroethane in the benthic polychaete, Nereis succinea: quantitative estimation by analyzing the partitioning of chemicals between gut fluid and lipid.

    PubMed

    Wang, Fei; Pei, Yuan-yuan; You, Jing

    2015-02-01

    Biotransformation plays an important role in the bioaccumulation and toxicity of a chemical in biota. Dichlorodiphenyltrichloroethane (DDT) commonly co-occurs with its metabolites (dichlorodiphenyldichloroethane [DDD] and dichlorodiphenyldichloroethylene [DDE]), in the environment; thus it is a challenge to accurately quantify the biotransformation rates of DDT and distinguish the sources of the accumulated metabolites in an organism. The present study describes a method developed to quantitatively analyze the biotransformation of p,p'-DDT in the benthic polychaete, Nereis succinea. The lugworms were exposed to sediments spiked with DDT at various concentrations for 28 d. Degradation of DDT to DDD and DDE occurred in sediments during the aging period, and approximately two-thirds of the DDT remained in the sediment. To calculate the biotransformation rates, residues of individual compounds measured in the bioaccumulation testing (after biotransformation) were compared with residues predicted by analyzing the partitioning of the parent and metabolite compounds between gut fluid and tissue lipid (before biotransformation). The results suggest that sediment ingestion rates decreased when DDT concentrations in sediment increased. Extensive biotransformation of DDT occurred in N. succinea, with 86% of DDT being metabolized to DDD and <2% being transformed to DDE. Of the DDD that accumulated in the lugworms, approximately 70% was the result of DDT biotransformation, and the remaining 30% was from direct uptake of sediment-associated DDD. In addition, the biotransformation was not dependent on bulk sediment concentrations, but rather on bioaccessible concentrations of the chemicals in sediment, which were quantified by gut fluid extraction. The newly established method improved the accuracy of prediction of the bioaccumulation and toxicity of DDTs. PMID:25470143

  3. Freshwater springs on intertidal sand flats cause a switch in dominance among polychaete worms

    NASA Astrophysics Data System (ADS)

    Zipperle, Andreas; Reise, Karsten

    2005-08-01

    Effects of freshwater seepage on benthic macrofauna were investigated on the sandy tidal flats near the island of Sylt (German Wadden Sea) in 2002. Several permanent seepage areas (50 to 200 m offshore; up to 200 m 2 in area) were examined, in which salinity ranged from 22-29 outside to 0-16 psu inside seepage areas in the upper 20 cm of sediment during summer low tides. The freshwater seepage areas were characterised by an absence of lugworms ( Arenicola marina) and a twelve-fold increase in nereid polychaetes ( Nereis diversicolor and N. virens) relative to non-seepage areas. Lugworms and ragworms were scarce in a transition zone, which was colonised by juvenile lugworms. We suggest that nereid polychaetes avoid competition with bioturbating lugworms by adapting to areas of low salinity (freshwater seepage).

  4. Characterization of specificity of bacterial community structure within the burrow environment of the marine polychaete Hediste (Nereis) diversicolor.

    PubMed

    Pischedda, Laura; Militon, Cécile; Gilbert, Franck; Cuny, Philippe

    2011-12-01

    Bioturbation is known to stimulate microbial communities, especially in macrofaunal burrows where the abundance and activities of bacteria are increased. Until now, these microbial communities have been poorly characterized and an important ecological question remains: do burrow walls harbor similar or specific communities compared with anoxic and surface sediments? The bacterial community structure of coastal sediments inhabited by the polychaete worm Hediste diversicolor was investigated. Surface, burrow wall and anoxic sediments were collected at the Carteau beach (Gulf of Fos, Mediterranean Sea). Bacterial diversity was determined by analyzing small subunit ribosomal RNA (16S rRNA) sequences from three clone libraries (168, 179 and 129 sequences for the surface, burrow wall and anoxic sediments, respectively). Libraries revealed 306 different operational taxonomic units (OTUs) belonging to at least 15 bacterial phyla. Bioinformatic analyses and comparisons between the three clone libraries showed that the burrow walls harbored a specific bacterial community structure which differed from the surface and anoxic environments. More similarities were nevertheless found with the surface assemblage. Inside the burrow walls, the bacterial community was characterized by high biodiversity, which probably results from the biogeochemical heterogeneity of the burrow system. PMID:21946148

  5. Mesoderm patterning and morphogenesis in the polychaete Alitta virens (Spiralia, Annelida): Expression of mesodermal markers Twist, Mox, Evx and functional role for MAP kinase signaling.

    PubMed

    Kozin, Vitaly V; Filimonova, Daria A; Kupriashova, Ekaterina E; Kostyuchenko, Roman P

    2016-05-01

    Mesoderm represents the evolutionary youngest germ layer and forms numerous novel tissues in bilaterian animals. Despite the established conservation of the gene regulatory networks that drive mesoderm differentiation (e.g. myogenesis), mechanisms of mesoderm specification are highly variable in distant model species. Thus, broader phylogenetic sampling is required to reveal common features of mesoderm formation across bilaterians. Here we focus on a representative of Spiralia, the marine annelid Alitta virens, whose mesoderm development is still poorly investigated on the molecular level. We characterize three novel early mesodermal markers for A. virens - Twist, Mox, and Evx - which are differentially expressed within the mesodermal lineages. The Twist mRNA is ubiquitously distributed in the fertilized egg and exhibits specific expression in endomesodermal- and ectomesodermal-founder cells at gastrulation. Twist is expressed around the blastopore and later in a segmental metameric pattern. We consider this expression to be ancestral, and in support of the enterocoelic hypothesis of mesoderm evolution. We also revealed an early pattern of the MAPK activation in A. virens that is different from the previously reported pattern in spiralians. Inhibition of the MAPK pathway by U0126 disrupts the metameric Twist and Mox expression, indicating an early requirement of the MAPK cascade for proper morphogenesis of endomesodermal tissues. PMID:27000638

  6. An untargeted gas chromatography mass spectrometry metabolomics platform for marine polychaetes.

    PubMed

    Fernández-Varela, R; Tomasi, G; Christensen, J H

    2015-03-01

    The development of an appropriate extraction method for untargeted environmental metabolomic analysis of marine polychaetes could promote their use for environmental monitoring purposes. To this end, we compared four extraction methods on the marine polychaete Nereis virens both exposed to crude oil and non-exposed. XCMS was used for feature detection and preprocessing; different normalization and scaling approaches were tested; and principal component analysis (PCA) was used together with basic statistical tests to ascertain common metabolic patterns and determine the most suitable extraction method. We conclude that a two-step extraction procedure with 80:20 (v/v) methanol:water on freeze dried polychaete tissue provides the best trade-off between analysis time, and extraction efficiency and intermediate reproducibility. No definitive conclusions could be drawn about the ability of the method to discriminate controls and crude oils in actual biological replicates because the experiment was carried out by design on analytical replicates only. We show that the normalization to the sum of all the common features, and the use of a weighted least squares criterion to fit the PCA by means of scaling to the median absolute deviation (MAD) of the pooled quality control samples significantly improved the clustering of controls and crude oil exposed samples. The scaling alone led to an increase of 19% in explained variance compared to ordinary PCA. PMID:25660527

  7. Biochemical and mechanical characterization of Nereis worm jaws

    NASA Astrophysics Data System (ADS)

    Broomell, Christopher C.

    The ultimate goal of biomimetics is to elucidate the design principles governing performance in biological materials and apply them to engineering systems. Successful transfer of these principles will require a thorough understanding of the complex interplay between molecular composition, organization and mechanical properties of the material. This dissertation describes the mechanical and biochemical characterization of jaws from the marine polychaete Nereis virens. Nereid jaws possess remarkable mechanical properties considering their predominantly organic composition. Hardness and stiffness are comparable to human dentin. However, in stark contrast to dentin, in Nereis these properties are achieved without mineralization. The role of metal ions in jaw sclerotization is addressed. In the pristine state, Zn ions are concentrated at the tip and toothed-edge of the jaw and are critical for hardness and modulus; both properties are reduced by ˜70% following Zn removal by treatment with EDTA. Furthermore, metal content in the jaw can be manipulated by soaking Zn-depleted samples in metal solutions; the comparative effects of treatment with alternative transition metals under both dry and hydrated conditions are described. The molecular composition of the jaw is also addressed. Protein comprises ˜90% of the jaw mass; amino acid analysis indicates that histidine is increased in the hardened, Zn-rich tip. The major protein component in Nereid jaw extracts is purified and characterized by partial peptide mapping and isolation of a partial clone from a jaw pulp cDNA library. Nvjp-1 is a 38 kDa glycine- histidine-rich protein and is believed to be the principle structural protein in the hardened jaw tip. The effects of selected environmental factors on Nvjp-1 structure and assembly are described. Transition from low to high pH is accompanied by changes in secondary structure and a significant molecular elongation. Furthermore, exposure to transition metals, notably Zn and

  8. Ecology of the polychaete Nereis diversicolor in the Canal de Mira (Ria de Aveiro, Portugal): Population dynamics, production and oogenic cycle

    NASA Astrophysics Data System (ADS)

    Abrantes, António; Pinto, Fátima; Moreira, Maria Helena

    1999-07-01

    The population of Nereis diversicolor O.F. Müller was studied in 1993 and 1994 at three intertidal areas along the estuarine gradient in the Canal de Mira (Ria de Aveiro). The population dynamics, secondary production and growth were followed for the 2-year period, whereas in the second year, a study on the oogenic cycle was also carried out. For the population dynamics and production studies, core samples were collected monthly at each site, and for the study of the oogenic cycle, medium size and large individuals were sampled from the sediment. Mean annual densities were higher (573-718 ind.m -2) at a station located in the middle zone of the channel, followed by the outer (190-275 ind.m -2) and the innermost (43-94 ind.m -2) stations. A cohort analysis by `Bhatta' software enabled the separation of the cohorts present at each date, and two cohorts were followed from recruitment to extinction. The secondary production ranged from 15.9 to 74.2 g ash free dry weight.m -2.year -1 and the P/ overlineBratio from 4.4 to 7.9. The average body growth rate varied between 0.16 and 0.20 mm.d -1 for worms longer than 2 cm. Two recruitment seasons were detected each year. Two spawning periods were also observed, one in the spring and the other in early autumn.

  9. Influence of copper oxide nanoparticle shape on bioaccumulation, cellular internalization and effects in the estuarine sediment-dwelling polychaete, Nereis diversicolor.

    PubMed

    Thit, Amalie; Dybowska, Agnieszka; Købler, Carsten; Kennaway, Gabrielle; Selck, Henriette

    2015-10-01

    CuO nanoparticles (NPs) released into the aquatic environment will likely accumulate in the sediment. Here we synthesized and characterized CuO NPs with different shapes and thus sizes: spheres, rods and spindles. Nereis diversicolor were exposed for 10 days to control sediment or sediment spiked with CuO NPs or aqueous Cu (Cu-Aq, CuCl2) at 7, 70 and 140 μg Cu g(-1) dw sediment. Cu from all Cu treatments accumulated in worms in a concentration-dependent manner. Only Cu-Aq decreased burrowing, suggesting that worms avoid Cu when added to sediment as Cu-Aq, but not CuO NPs. Transmission Electron Microscopy of gut sections indicated limited presence of CuO NP-like objects in the gut lumen, but evidence on whether accumulated Cu from CuO NP exposure was internalized as particles was not conclusive. Overall, bioavailability and avoidance was not influenced by particle shape or size, whereas Cu form (Cu-Aq vs particulate) and exposure concentration had significant impact. PMID:26149327

  10. Restriction of Spartina anglica (C.E. Hubbard) marsh development by the infaunal polychaete Nereis diversicolor (O.F. Müller)

    NASA Astrophysics Data System (ADS)

    Paramor, O. A. L.; Hughes, R. G.

    2007-01-01

    Spartina anglica has been planted around the coast of SE England, and throughout the world, to help stabilise sediments and reduce wave erosion of sea defences. Recently the areas of S. anglica have declined on this coast, contributing to the overall loss of saltmarsh area, in contrast to the north and west coasts of the UK where expanding S. anglica marshes have had to be controlled to maintain mudflat feeding areas for birds. Field experiments were established in two old coastal realignment areas in the Blythe Estuary (Suffolk) and on open mudflats in the Blackwater Estuary (Essex), in which surface deposit feeding by Nereis diversicolor was prevented by laying porous mats on the mudflat surface. These mats promoted sediment deposition and quickly became buried. S. anglica colonised these infauna exclusion areas by growth of rhizomes from adjacent plants, to a significantly higher degree than in control areas. In one of the Blythe sites this occurred when the adjacent S. anglica marsh was retreating. These results support the conclusions of Paramor and Hughes (2004, 2005), that the infauna are responsible for much of the loss of saltmarsh in SE England, and that managed coastal realignment will not necessarily lead to saltmarsh creation. The experiments point to an alternative means of managing saltmarsh creation and sediment accretion on existing mudflats, with consequent benefits for coastal defence and conservation.

  11. CYP4 mRNA expression in marine polychaete Perinereis aibuhitensis in response to petroleum hydrocarbon and deltamethrin.

    PubMed

    Chen, Xue; Zhou, Yibing; Yang, Dazuo; Zhao, Huan; Wang, Lili; Yuan, Xiutang

    2012-09-01

    A CYP4 cDNA was cloned and characterized to identify the relationship between persistent organic pollutants and stress response in marine polychaete Perinereis aibuhitensis. The full length of PaCYP4 cDNA is 1857bp and encodes 481 amino acids. The deduced amino acid sequence showed 73% identity with CYP4BB1 from polychaete Nereis virens and shared high homology to other known CYP4 sequences. The expression level of PaCYP4 under petroleum hydrocarbon (PH) and deltamethrin (DM) exposure was detected using Real-time PCR. PH and combined toxicity treatments elevated the mRNA level of PaCYP4 in a dose- and time-dependent manner. The mRNA transcripts of PaCYP4 increased at the beginning of DM exposure and then eventually decreased, and the expression level of PaCYP4 down-regulated with increasing concentration of DM. CYP4 in P. aibuhitensis plays an important role in the metabolism of petroleum hydrocarbon and organochlorine pesticide. PMID:22768804

  12. Influence of mode of exposure and the presence of a tubiculous polychaete on the fate of benz(a)anthracene in the benthos

    SciTech Connect

    McElroy, A.E.; Farrington, J.W.; Teal, J.M. )

    1990-11-01

    The distribution and metabolism of ({sup 14}C-12)benz(a)-anthracene (BA) was followed in benthic microcosms in the presence and absence of the polychaete Nereis virens for periods of 4-25 days to simultaneously assess the effects of mode of introduction and the presence of large burrowing organisms on the fate of polycyclic aromatic hydrocarbons (PAH) and their metabolites in the benthos. Radiolabeled BA was added to the chambers in three ways: already sorbed to the entire sediment reservoir, directly into the water column, or incorporated into food for the worms. BA added to the water column was more available for uptake and metabolism by worms and microbial mineralization to CO{sub 2} than BA previously sorbed to the entire sediment reservoir. In experiments with the sediment reservoir uniformly labeled with BA, worms increased flux of BA from the sediment, and with time, their presence led to increased rates of microbial mineralization of BA to CO{sub 2}. Dietary BA was most rapidly metabolized by Nereis.

  13. Redescriptions of Nereis oligohalina (Rioja, 1946) and N. garwoodi González-Escalante & Salazar-Vallejo, 2003 and description of N. confusa sp. n. (Annelida, Nereididae)

    PubMed Central

    Conde-Vela, Víctor M.; Salazar-Vallejo, Sergio I.

    2015-01-01

    Abstract Type material of several polychaete species described by Enrique Rioja from Mexican coasts are lost, and the current status of some species is doubtful. Nereis oligohalina (Rioja, 1946) was described from the Gulf of Mexico, but it has been considered a junior synonym of Nereis occidentalis Hartman, 1945, or regarded as a distinct species with an amphiamerican distribution. On the other hand, Nereis garwoodi González-Escalante & Salazar-Vallejo, 2003, described from Chetumal Bay, Caribbean coasts, could be confused with Nereis oligohalina. In order to clarify these uncertainties, Nereis oligohalina is redescribed based on specimens from the Mexican Gulf of Mexico, including a proposed neotype; further, Nereis garwoodi is redescribed including the selection of lectotype and paralectotypes, and Nereis confusa sp. n. is described with material from the Gulf of California. A key for the identification of similar species and some comments about speciation in nereidid polychaetes are also included. PMID:26448699

  14. Redescriptions of Nereis oligohalina (Rioja, 1946) and N. garwoodi González-Escalante & Salazar-Vallejo, 2003 and description of N. confusa sp. n. (Annelida, Nereididae).

    PubMed

    Conde-Vela, Víctor M; Salazar-Vallejo, Sergio I

    2015-01-01

    Type material of several polychaete species described by Enrique Rioja from Mexican coasts are lost, and the current status of some species is doubtful. Nereis oligohalina (Rioja, 1946) was described from the Gulf of Mexico, but it has been considered a junior synonym of Nereis occidentalis Hartman, 1945, or regarded as a distinct species with an amphiamerican distribution. On the other hand, Nereis garwoodi González-Escalante & Salazar-Vallejo, 2003, described from Chetumal Bay, Caribbean coasts, could be confused with Nereis oligohalina. In order to clarify these uncertainties, Nereis oligohalina is redescribed based on specimens from the Mexican Gulf of Mexico, including a proposed neotype; further, Nereis garwoodi is redescribed including the selection of lectotype and paralectotypes, and Nereis confusa sp. n. is described with material from the Gulf of California. A key for the identification of similar species and some comments about speciation in nereidid polychaetes are also included. PMID:26448699

  15. Zinc and mechanical prowess in the jaws of Nereis, a marine worm

    PubMed Central

    Lichtenegger, Helga C.; Schöberl, Thomas; Ruokolainen, Janne T.; Cross, Julie O.; Heald, Steve M.; Birkedal, Henrik; Waite, J. Herbert; Stucky, Galen D.

    2003-01-01

    Higher animals typically rely on calcification to harden certain tissues such as bones and teeth. Some notable exceptions can be found in invertebrates: The fangs, teeth, and mandibles of diverse arthropod species have been reported to contain high levels of zinc. Considerable quantities of zinc also occur in the jaws of the marine polychaete worm Nereis sp. High copper levels in the polychaete worm Glycera dibranchiata recently were attributed to a copper-based biomineral reinforcing the jaws. In the present article, we attempt to unravel the role of zinc in Nereis limbata jaws, using a combination of position-resolved state-of-the-art techniques. It is shown that the local hardness and stiffness of the jaws correlate with the local zinc concentration, pointing toward a structural role for zinc. Zinc always is detected in tight correlation with chlorine, suggesting the presence of a zinc–chlorine compound. No crystalline inorganic phase was found, however, and results from x-ray absorption spectroscopy further exclude the presence of simple inorganic zinc–chlorine compounds in amorphous form. The correlation of local histidine levels in the protein matrix and zinc concentration leads us to hypothesize a direct coordination of zinc and chlorine to the protein. A comparison of the role of the transition metals zinc and copper in the jaws of two polychaete worm species Nereis and Glycera, respectively, is presented. PMID:12886017

  16. Zinc and mechanical prowess in the jaws of Nereis, a marine worm

    SciTech Connect

    Lichtenegger, Helga C.; Schoberl, Thomas; Ruokolainen, Janne T.; Cross, Julie O.; Heald, Steve M.; Birkedal, Henrik; Waite, J. Herbert; Stucky, Galen

    2003-08-05

    Higher animals typically rely on calcification to harden certain tissues such as bones and teeth. Some notable exceptions can be found in invertebrates: The fangs, teeth, and mandibles of diverse arthropod species have been reported to contain high levels of zinc. Considerable quantities of zinc also occur in the jaws of the marine polychaete worm Nereis sp. High copper levels in the polychaete worm Glycera dibranchiata recently were attributed to a copper-based biomineral reinforcing the jaws. In the present article, we attempt to unravel the role of zinc in Nereis limbata jaws, using a combination of position-resolved state-of-the-art techniques. It is shown that the local hardness and stiffness of the jaws correlate with the local zinc concentration, pointing toward a structural role for zinc. Zinc always is detected in tight correlation with chlorine, suggesting the presence of a zinc-chlorine compound. No crystalline inorganic phase was found, however, and results from x-ray absorption spectroscopy further exclude the presence of simple inorganic zinc-chlorine compounds in amorphous form. The correlation of local histidine levels in the protein matrix and zinc concentration leads us to hypothesize a direct coordination of zinc and chlorine to the protein. A comparison of the role of the transition metals zinc and copper in the jaws of two polychaete worm species Nereis and Glycera, respectively, is presented.

  17. Zinc and mechanical prowess in the jaws of Nereis, a marine worm

    SciTech Connect

    Lichtenegger, Helga C.; Schoberl, Thomas; Ruokolainen, Janne T.; Cross, Julie O.; Heald, Steve M.; Birkedal, Henrik; Waite, J. Herbert; Stucky, Galen

    2003-08-05

    Higher animals typically rely on calcification to harden certain tissues such as bones and teeth. Some notable exceptions can be found in invertebrates: The fangs, teeth, and mandibles of diverse arthropod species have been reported to contain high levels of zinc. Considerable quantities of zinc also occur in the jaws of the marine polychaete worm Nereis sp. High copper levels in the polychaete worm Glycera dibranchiata recently were attributed to a copper-based biomineral reinforcing the jaws. In the present article, we attempt to unravel the role of zinc in Nereis limbata jaws, using a combination of position-resolved state-of-the-art techniques. It is shown that the local hardness and stiffness of the jaws correlate with the local zinc concentration, pointing toward a structural role for zinc. Zinc always is detected in tight correlation with chlorine, suggesting the presence of a zinc– chlorine compound. No crystalline inorganic phase was found, however, and results from x-ray absorption spectroscopy further exclude the presence of simple inorganic zinc– chlorine compounds in amorphous form. The correlation of local histidine levels in the protein matrix and zinc concentration leads us to hypothesize a direct coordination of zinc and chlorine to the protein. A comparison of the role of the transition metals zinc and copper in the jaws of two polychaete worm species Nereis and Glycera, respectively, is presented.

  18. Zinc and mechanical prowess in the jaws of Nereis, a marine worm.

    PubMed

    Lichtenegger, Helga C; Schöberl, Thomas; Ruokolainen, Janne T; Cross, Julie O; Heald, Steve M; Birkedal, Henrik; Waite, J Herbert; Stucky, Galen D

    2003-08-01

    Higher animals typically rely on calcification to harden certain tissues such as bones and teeth. Some notable exceptions can be found in invertebrates: The fangs, teeth, and mandibles of diverse arthropod species have been reported to contain high levels of zinc. Considerable quantities of zinc also occur in the jaws of the marine polychaete worm Nereis sp. High copper levels in the polychaete worm Glycera dibranchiata recently were attributed to a copper-based biomineral reinforcing the jaws. In the present article, we attempt to unravel the role of zinc in Nereis limbata jaws, using a combination of position-resolved state-of-the-art techniques. It is shown that the local hardness and stiffness of the jaws correlate with the local zinc concentration, pointing toward a structural role for zinc. Zinc always is detected in tight correlation with chlorine, suggesting the presence of a zinc-chlorine compound. No crystalline inorganic phase was found, however, and results from x-ray absorption spectroscopy further exclude the presence of simple inorganic zinc-chlorine compounds in amorphous form. The correlation of local histidine levels in the protein matrix and zinc concentration leads us to hypothesize a direct coordination of zinc and chlorine to the protein. A comparison of the role of the transition metals zinc and copper in the jaws of two polychaete worm species Nereis and Glycera, respectively, is presented. PMID:12886017

  19. INFLUENCE OF SOOT CARBON ON THE BIOACCULUMATION OF SEDIMENT-BOUND POLYCYCLIC AROMATIC HYDROCARBONS BY MARINE BENTHIC INVERTEBRATES: AN INTERSPECIES COMPARISON

    EPA Science Inventory

    The sorption of polycyclic aromatic hydrocarbons (PAHs) to soot carbon in marine sediments has been hypothesized to reduce PAH bioavailability. This hypothesis was tested for eight species of marine benthic invertebrates (four polychaete worms, Clymenella torquata, Nereis virens,...

  20. Effects of Hypoxia on Animal Burrow Constraction and Consequent Effects on Sediment Redox Profiles (SETAC08)

    EPA Science Inventory

    We investigated the effects of mild hypoxia on the burrowing behavior of three marine species (the hard clam Mercenaria mercenaria, the polychaete worm Nereis virens, and the amphipod Leptocheirus plumulosus) and consequent effects on sediment redox profiles. Animals were introdu...

  1. Application of microPIXE and STIM in analyses of fossil and Recent polychaete jaws (scolecodonts)

    NASA Astrophysics Data System (ADS)

    Elfman, Mikael; Eriksson, Mats; Kristiansson, Per; Malmqvist, Klas; Pallon, Jan

    1999-10-01

    MicroPIXE and STIM analysis of the chemistry of fossil and Recent polychaete jaws (scolecodonts) demonstrates that they, apart from their protein composition, constitute inorganic components. The PIXE images reveal that the elemental distribution is generally homogeneous for some elements while it is heterogeneous, especially for zinc and iron. The jaw of the Recent polychaete Nereis sp. has zinc concentrated in the tip, probably for hardening purposes. Similar accumulations were revealed in fossil scolecodonts; zinc in Kettnerites ( K.) martinssonii and iron and titanium in Hadoprion cervicornis.

  2. Three novel cytochrome P450 genes identified in the marine polychaete Perinereis nuntia and their transcriptional response to xenobiotics.

    PubMed

    Zheng, Senlin; Chen, Bin; Qiu, Xiaoyan; Lin, Kangli; Yu, Xingguang

    2013-06-15

    Polychaetes have previously been used as bioindicators of environmental pollution. Their ability to eliminate organic pollutants such as polycyclic aromatic hydrocarbons (PAH) has been extensively analyzed. However, the cytochrome P450 monooxygenases (CYP) genes in polychaetes, which catalyze the first step of oxidative degradation of PAHs, have received little attention. Based on the partial sequences of three CYP genes that were enriched by subtractive cDNA libraries of the polychaete Perinereis nuntia, we amplified and sequenced the full-length cDNA of these novel CYP genes. These genes were named CYP4BB2, CYP423A1 and CYP424A1 by the Cytochrome P450 Nomenclature Committee. The deduced amino acid sequence of CYP4BB2 in P. nuntia showed 68% sequence identity to CYP4BB1 in Nereis virens, and was listed as a new member of the CYP4BB subfamily. The sequence of CYP423A1 and CYP424A1 both share less than 40% sequence identity to all known CYP enzymes and were classed into new CYP families. CYP family members are composite parts of a larger group called a clan. CYP4BB2 and CYP424A1 are listed as CYP4 clan members, while CYP423A1 is of the CYP2 clan. The 3D structures of these P. nuntia CYPs were successfully predicted by homology-modeling using the SWISS-MODEL workspace. The models of CYP424A1 and CYP4BB2 were created using 1jpzB (CYP102A) as a template, while CYP423A1 utilized 3czhB (CYP2R1) as its template. The presence of characteristic CYP superfamily motifs, such as the F-G⋯C-G amino acid sequence, and the conservation of the three-dimensional CYP structure shown by the modeling, suggested that these novel P. nuntia CYP genes may contain conserved functional domains of CYP monooxygenases. To examine the effect of xenobiotics on living organisms, we analyzed the transcriptional levels of these three new CYP genes in sandworms (P. nuntia) exposed to seawater artificially contaminated with benzo[a]pyrene (BaP). We also exposed individuals to industrial wastewater

  3. Peptide Synthetase Gene in Trichoderma virens

    PubMed Central

    Wilhite, S. E.; Lumsden, R. D.; Straney, D. C.

    2001-01-01

    Trichoderma virens (synonym, Gliocladium virens), a deuteromycete fungus, suppresses soilborne plant diseases caused by a number of fungi and is used as a biocontrol agent. Several traits that may contribute to the antagonistic interactions of T. virens with disease-causing fungi involve the production of peptide metabolites (e.g., the antibiotic gliotoxin and siderophores used for iron acquisition). We cloned a 5,056-bp partial cDNA encoding a putative peptide synthetase (Psy1) from T. virens using conserved motifs found within the adenylate domain of peptide synthetases. Sequence similarities with conserved motifs of the adenylation domain, acyl transfer, and two condensation domains support identification of the Psy1 gene as a gene that encodes a peptide synthetase. Disruption of the native Psy1 gene through gene replacement was used to identify the function of this gene. Psy1 disruptants produced normal amounts of gliotoxin but grew poorly under low-iron conditions, suggesting that Psy1 plays a role in siderophore production. Psy1 disruptants cannot produce the major T. virens siderophore dimerum acid, a dipetide of acylated Nδ-hydroxyornithine. Biocontrol activity against damping-off diseases caused by Pythium ultimum and Rhizoctonia solani was not reduced by the Psy1 disruption, suggesting that iron competition through dimerum acid production does not contribute significantly to disease suppression activity under the conditions used. PMID:11679326

  4. Ecological consequence of the introduction of the polychaete Marenzelleria cf. viridis into a shallow-water biotope of the northern Baltic Sea

    NASA Astrophysics Data System (ADS)

    Kotta, Jonne; Orav, Helen; Sandberg-Kilpi, Eva

    2001-12-01

    Effects of the North American polychaete Marenzelleria cf. viridis on a simple shallow-water benthic community of the northern Baltic Sea were studied in a field experiment combining natural densities of dominating macrofaunal species. The presence of M. cf. viridis increased benthic production (chlorophyll a) and reduced the survival of the native polychaete Nereis diversicolor. Adult Macoma balthica caused a significant mortality on M. cf. viridis whereas adult Cerastoderma glaucum had no effect on M. cf. viridis. We suggest that the competitive interactions between M. cf. viridis and M. balthica are a possible key factor determining the distribution pattern of M. cf. viridis in the Baltic Sea.

  5. New Insights into Polychaete Traces and Fecal Pellets: Another Complex Ichnotaxon?

    PubMed Central

    Kulkarni, Kantimati G.; Panchang, Rajani

    2015-01-01

    Neoichnological observations help refine paleoichnological records. The present study reports extensive observations on the distribution, morphology, occurrence and association of burrows and fecal pellets of the polychaete Nereis diversicolor in the Kundalika Estuary on the west coast of India. Our holistic study of these modern-day traces suggests it to be a complex trace arising from domichnial, fodinichnial and possibly pascichnial behavior of polychaetes. The study for the first time reports extensive fecal pellet production, distribution and their preservation as thick stacks in modern estuarine environment. These observations testify the fossilization potential of pellets and provide an explanation to their origin in the geological record. Their occurrence as strings associated with mounds not only suggests pascichnial behaviour of polychaetes but also allows the assignment of post-Paleozoic Tomaculum to the activity of polychaete worms. The production of fecal pellets in such large quantities plays a major role in increasing the average grain size of the substrate of these estuarine tidal flats, thereby improving aeration within the substrate. PMID:26439262

  6. Influence of an elevated cadmium level in the food on growth and food conversion of Nereis succinea

    SciTech Connect

    Neuhoff, H.-G.

    1983-11-01

    In recent times increasing amounts of cadmium have been introduced into the aquatic environment as could be traced in sediments. Cadmium, however, has various negative physiological effects among which sublethal Cd pollution is reported to affect reproduction, development and growth. Growth and reproduction, however, are the premise for the existence of a population. In order to analyze effects of Cd on growing organisms, in this study the polychaete Nereis succinea was exposed to sublethal Cd concentrations in the food. As growth related parameters were carried out in spring (April to June) and summer/autumn (August to October).

  7. Chronic sublethal effects of San Francisco Bay sediments on Nereis (neanthes) arenaceodentata: Non treatment factors. Final report

    SciTech Connect

    Moore, D.W.; Dillon, T.M.

    1992-09-01

    Initial development of a chronic sublethal sediment bioassay with the polychaete Nereis (Neanthes) arenaceodentata is described. The test was initiated with 2 to 3-week-old postemergent juvenile worms and terminated after 21 days. The sublethal test end point was estimated individual somatic growth rate (milligrams dry weight/day). The potential bias due to selected nontreatment factors on polychaete survival and growth was evaluated. For example, grain size had no effect, while the number of worms added to each exposure vessel was critical. Direct transfer from 30 ppt to salinities < or = ppt had a highly significant and adverse effect on survival and growth. Both survival and growth of juvenile worms may be adversely affected if test conditions involve exposures to > or = mg/L ammonia or > or = mg/L hydrogen sulfide.... Chronic, Growth, Neanthes, Sediment, Sublethal.

  8. LACK OF ANTAGONISM BETWEEN THE BIOCONTROL AGENT GLIOCLADIUM VIRENS AND VESICULAR ARBUSCULAR MYCORRHIZAL FUNGI

    EPA Science Inventory

    Fungal biocontrol agent Gliocladium virens Miller, Giddens & Foster on the colonization of cucumber by the VA mycorrhizal fungi Glomus etunicatum Becker & Gerdemann and Glomus mosseae (Nicol. & Gerd.) Gerdemann & Trappe was investigated. noculum of G. virens grown on wheat bran o...

  9. Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part I: Amino acids

    NASA Astrophysics Data System (ADS)

    Woulds, Clare; Middelburg, Jack J.; Cowie, Greg L.

    2012-01-01

    Of the factors which control the quantity and composition of organic matter (OM) buried in marine sediments, the links between infaunal ingestion and gut passage and sediment geochemistry have received relatively little attention. This study aimed to use feeding experiments and novel isotope tracing techniques to quantify amino acid net accumulation and loss during polychaete gut passage, and to link this to patterns of selective preservation and decay in sediments. Microcosms containing either Arenicolamarina or Hediste (formerly Nereis) diversicolor were constructed from defaunated sediment and filtered estuarine water, and maintained under natural temperature and light conditions. They were fed with 13C-labelled diatoms daily for 8 days, and animals were transferred into fresh, un-labelled sediment after ∼20 days. Samples of fauna, microcosm sediment and faecal matter were collected after 8, ∼20 and ∼40 days, and analysed for their bulk isotopic signatures and 13C-labelled amino acid compositions. Bulk isotopic data showed that, consistent with their feeding modes, Hediste assimilated added 13C more quickly, and attained a higher labelling level than Arenicola. Both species retained the added 13C in their biomass even after removal from the food. A principal component analysis of 13C-labelled amino acid mole percentages showed clear differences in composition between the algae, faunal tissues, and sediment plus faecal matter. Further, the two species of polychaete showed different compositions in their tissues. The amino acids phenylalanine, valine, leucine, iso-leucine, threonine and proline showed net accumulation in polychaete tissues. Serine, methionine, lysine, aspartic and glutamic acids and tyrosine were rapidly lost through metabolism, consistent with their presence in easily digestible cell components (as opposed to cell walls which offer physical protection). All sample types (polychaete tissues, sediments and faecal matter) were enriched in

  10. Competitiveness of a Genetically Engineered Strain of Trichoderma virens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The intraspecific competitiveness of a genetically engineered strain of Trichoderma virens was assessed relative to the non-transformed, progenitor strain and an isogenic, auxotrophic strain using a replacement series design. The transformed strain was less fit, but appeared more competitive than t...

  11. Burial of Zostera marina seeds in sediment inhabited by three polychaetes: Laboratory and field studies

    NASA Astrophysics Data System (ADS)

    Delefosse, M.; Kristensen, E.

    2012-07-01

    The large number of seeds produced by eelgrass, Zostera marina, provides this plant with a potential to disperse widely and colonise new areas. After dispersal, seeds must be buried into sediment for assuring long-term survival, successful germination and safe seedling development. Seeds may be buried passively by sedimentation or actively through sediment reworking by benthic fauna. We evaluated the effect of three polychaetes on the burial rate and depth of eelgrass seeds. Burial was first measured in controlled laboratory experiments using different densities of Nereis (Hediste) diversicolor (400-3200 ind m- 2), Arenicola marina (20-80 ind m- 2), and the invasive Marenzelleria viridis (400-1600 ind m- 2). The obtained results were subsequently compared with burial rates of seed mimics in experimental field plots (1 m2) dominated by the respective polychaetes. High recovery of seeds in the laboratory (97-100%) suggested that none of these polychaetes species feed on eelgrass seeds. N. diversicolor transported seeds rapidly (< 1 day) into its burrow, where they remained buried at a median depth of 0.5 cm. A. marina and M. viridis buried seeds by depositing their faeces on top of the sediment. At their highest abundance, A. marina and M. viridis buried seeds to a median depth of 6.7 cm and 0.5 cm, respectively, after a month. The burial efficiency and depth of these species were, in contrast to N. diversicolor, dependent on animal abundance. Only 2% of seed mimics casted in the field plots were recovered, suggesting that physical dispersion by waves and currents was considerably important for horizontal distribution. However, polychaete affected significantly the vertical distribution of seeds. Overall the effects of these three polychaetes indicate that benthic macroinvertebrates may significantly impact eelgrass seed bank at the ecosystem scale. Some species have a positive effect by burying seeds to shallow depths and thereby reducing seed predation and

  12. The metabolic and fitness costs associated with metal resistance in Nereis diversicolor.

    PubMed

    Pook, Chris; Lewis, Ceri; Galloway, Tamara

    2009-07-01

    The population of Nereis diversicolor inhabiting the upper reaches of Restronguet Creek, Cornwall, UK is highly resistant to acute zinc and copper toxicity. Here we employ bioenergetic accounting and fecundity counts to demonstrate the energetic costs associated with this phenomenon in terms of the worms' allocation of metabolic resources and reproductive output [P(r)]. Metal-resistant animals exhibited a scope for growth that was 46-62% less than that of animals from two non-resistant reference populations, corresponding to a mean metabolic cost of 1.31 mJ h(-1)mg DW(-1). The resistant population also contained 13% less lipid than animals from the reference populations and 73-81% less carbohydrates. Consequently, mass-specific fecundity was reduced in resistant animals by 39-45%, although material investment in individual gametes did not appear to vary. This demonstrates fitness costs associated with metal resistance in this ecologically important polychaete and adds to our understanding of phenotypic trade-offs associated with resistance. PMID:19285693

  13. Grazing effects by Nereis diversicolor on development and growth of green algal mats

    NASA Astrophysics Data System (ADS)

    Engelsen, Anna; Pihl, Leif

    2008-08-01

    Nereis diversicolor is generally considered to be a predator and deposit feeder, but have also been found to graze on benthic algae in shallow coastal areas. In this study we investigated the grazing effects on the development and growth of green algae, Ulva spp. Algal growth was studied in an experiment including two levels of sediment thickness; 100 mm sediment including macrofauna and 5 mm sediment without macrofauna, and three treatments of varying algal biomass; sediment with propagules, sediment with low algal biomass (120 g dry weight (dwt) m - 2 ) and sediment with high algal biomass (240 g dwt m - 2 ). In the 100 mm sediment, with a natural population of macrofauna, N. diversicolor was the dominating (60% of total biomass) species. After three weeks of experimentation the result showed that N. diversicolor was able to prevent initial algal growth, affect growth capacity and also partly reduce full-grown algal mats. The weight of N. diversicolor was significantly higher for polychaetes in treatments with algae added compared to non-algal treatments. There were also indications that a rich nutrient supply per algae biomass counteracted the grazing capacity of N. diversicolor.

  14. 40 CFR 180.1100 - Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 40 Protection of Environment 23 2010-07-01 2010-07-01 false Gliocladium virens isolate GL-21... RESIDUES IN FOOD Exemptions From Tolerances § 180.1100 Gliocladium virens isolate GL-21; exemption from the... the biofungicide Gliocladium virens GL-21 in or on all raw agricultural commodities when used...

  15. 40 CFR 180.1100 - Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 40 Protection of Environment 24 2011-07-01 2011-07-01 false Gliocladium virens isolate GL-21... RESIDUES IN FOOD Exemptions From Tolerances § 180.1100 Gliocladium virens isolate GL-21; exemption from the... the biofungicide Gliocladium virens GL-21 in or on all raw agricultural commodities when used...

  16. Genome Sequence of Ustilaginoidea virens IPU010, a Rice Pathogenic Fungus Causing False Smut

    PubMed Central

    Kumagai, Toshitaka; Ishii, Tomoko; Terai, Goro; Machida, Masayuki; Asai, Kiyoshi

    2016-01-01

    Ustilaginoidea virens is a rice pathogenic fungus that causes false smut disease, a disease that seriously damages the yield and quality of the grain. Analysis of the U. virens IPU010 33.6-Mb genome sequence will aid in the understanding of the pathogenicity of the strain, particularly in regard to effector proteins and secondary metabolic genes. PMID:27151791

  17. Prevalence and diversity of mycoviruses infecting the plant pathogen Ustilaginoidea virens.

    PubMed

    Jiang, Yinhui; Zhang, Tingting; Luo, Chaoxi; Jiang, Daohong; Li, Guoqing; Li, Qili; Hsiang, Tom; Huang, Junbin

    2015-01-01

    Rice false smut caused by Ustilaginoidea virens is a destructive disease in many rice-growing areas. Mycoviruses have been described in many fungal species, but there is little information regarding mycoviruses in U. virens. In this study, double-stranded (ds) RNA banding patterns were assessed in 198 wild-type isolates of U. virens obtained from different geographical regions in China. The presence of viral infections was unusually common in U. virens: 188 of the 198 isolates contained dsRNA elements with viral characteristics, and the presence of mixed infections with two or more related or unrelated mycoviruses was commonly detected. The GX-1 isolate contained four dsRNA mycoviruses: Ustilaginoidea virens RNA virus 1 (UvRV1) belonging to Totiviridae, Ustilaginoidea virens RNA virus 4 (UvRV4) belonging to an unclassified family which includes the Curvularia thermal tolerance virus, and the last two probably belonging to Partitiviridae. Biological comparisons of virus-free and infected fungal isolates revealed that UvRV1 strain GX-1 and UvRV4 were likely cryptic, since the infected strains did not show apparent symptoms or debilitation. Northern blotting experiments revealed that UvRV1 strain GX-1 and UvRV4 were frequently found in U. virens, irrespective of the place of origin, and similarly sized dsRNA bands were not always of similar sequence. Thus, our findings suggest that mycoviruses infecting U. virens in China are widespread and highly diverse. PMID:25200750

  18. Bioaccumulation and oxidative stress responses measured in the estuarine ragworm (Nereis diversicolor) exposed to dissolved, nano- and bulk-sized silver.

    PubMed

    Cozzari, Margherita; Elia, Antonia Concetta; Pacini, Nicole; Smith, Brian D; Boyle, David; Rainbow, Philip S; Khan, Farhan R

    2015-03-01

    The impact of Ag NPs on sediment-dwelling organisms has received relatively little attention, particularly in linking bioaccumulation to oxidative injury. The polychaete Nereis diversicolor was exposed to sediments spiked with dissolved Ag (added as AgNO3), Ag NPs (63 ± 27 nm) and larger bulk Ag particles (202 ± 56 μm), for up to 11 days at sublethal concentrations (nominally 2.5, 5, 10 μg Ag g(-1) sediment (dw)). There were concentration- and time-dependent differences in the accumulation of the three Ag forms, but all three forms elicited an oxidative stress response. In the cases of Ag NPs and bulk Ag particles, changes in antioxidant markers (glutathione, SOD, CAT, GPx, SeGPx, GST and GR) occurred without significant Ag accumulation. Differences in biomarker profiles between the three Ag forms suggest that the mechanism of oxidative stress caused by particulate Ag is distinct from that of dissolved Ag. PMID:25549865

  19. Bioavailability of inorganic and methylmercury to a marine deposit-feeding polychaete

    SciTech Connect

    Wang, W.X.; Stupakoff, I.; Gagnon, C.; Fisher, N.S.

    1998-09-01

    The authors measured the assimilation efficiencies (AEs) from various types of sediments and the uptake rate constants from the dissolved phase of inorganic mercury (Hg(II)) and methylmercury (CH{sub 3}Hg(II)) in the marine deposit-feeding polychaete Nereis succinea. AEs of Hg(II) ranged between 7 and 30% and were unaffected by sediment composition, whereas AEs of CH{sub 3}Hg(II) ranged between 43 and 83% and were strongly affected by sediment composition. Sediment grain size had no apparent effect on Hg(II) and Ch{sub 3}Hg(II) assimilation. AEs for Hg(II) associated with anoxic sediment were slightly lower than with oxic sediment, whereas CH{sub 3}Hg(II) displayed comparable AEs for both oxic and anoxic sediment. Dissolved uptake rate constants of CH{sub 3}Hg(II) were 2.2 times those of Hg(II). A bioenergetic-based kinetic model was used to separate the pathways (solute vs sediment) and sources [Hg(II) vs CH{sub 3}Hg(II)] of Hg accumulation in N. succinea. The model predicted that, under conditions typical of coastal sediment environments, CH{sub 3}Hg(II) accumulation contributes about 5--17% of total Hg accumulation in polychaetes. Most of the Hg(II) (>70%) accumulation is predicted to derive from sediment ingestion, whereas for CH{sub 3}Hg(II) the relative importance of dissolved vs sediment ingestion depends greatly on its partition coefficient for sediments. Uptake from the dissolved phase and sediment ingestion can be equally important for CH{sub 3}Hg(II) accumulation in N. succinea.

  20. Modeling metal bioaccumulation in a deposit-feeding polychaete from labile sediment fractions and from pore water.

    PubMed

    Baumann, Zofia; Fisher, Nicholas S

    2011-06-01

    Estuarine sediments are often highly enriched in particle-reactive metal contaminants and because aquatic animals have often been shown to acquire metals predominantly from their diet, benthic animals feeding on deposited or resuspended sediments may also accumulate metals through this uptake pathway. Laboratory experiments were performed in which the surface deposit-feeding polychaete, Nereis succinea, was exposed to As(+5), Cd, and Cr(+3) in pore water or in estuarine sediments with and without enrichment with algal debris. These experiments generated metal uptake parameters (assimilation efficiency of ingested metal [AE], uptake rate constant of dissolved metal, efflux rate constants following dietary or aqueous metal exposures) used in a kinetic model of metal bioaccumulation. The model showed that > 97% of the body burden of these metals is accumulated through ingested sediment. The kinetic model was further modified to consider the geochemical fractionation of the metals in the sediments because metals bound to some fractions were shown to be unavailable to these polychaetes. The modified model substituted the AE term for each metal by the percentage of metal extracted in neutral and weak acid exchangeable fractions (termed "carbonex" fraction) multiplied by the slope of the regression between the metal AE and its fractionation in carbonex. The modified model generated predictions of As, Cd, and Cr body burdens in polychaetes at three different estuarine sites that matched independent field observations at these sites (r²=0.84 for sediments without organic enrichment, r²=0.87 with organic enrichment). Model predictions that relied on total metal concentrations showed weaker relationships (r²=0.11-0.50). This study adds to the evidence for the dominance of dietary uptake of metals in aquatic animals and identifies a key sedimentary fraction of metals that can account for bioavailability of sediment-bound metals. PMID:21481438

  1. Polychaete burrows harbour distinct microbial communities in oil-contaminated coastal sediments.

    PubMed

    Taylor, Joe D; Cunliffe, Michael

    2015-08-01

    Previous studies have shown that the bioturbating polychaete Hediste (Nereis) diversicolor can affect the composition of bacterial communities in oil-contaminated sediments, but have not considered diversity specifically within bioturbator burrows or the impact on microbial eukaryotes. We tested the hypothesis that H. diversicolor burrows harbour different eukaryotic and bacterial communities compared with un-bioturbated sediment, and that bioturbation stimulates oil degradation. Oil-contaminated sediment was incubated with or without H. diversicolor for 30 days, after which sediment un-affected by H. diversicolor and burrow DNA/RNA samples were analysed using quantitative reverse transcription PCR (Q-RT-PCR) and high-throughput sequencing. Fungi dominated both burrow and un-bioturbated sediment sequence libraries; however, there was significant enrichment of bacterivorous protists and nematodes in the burrows. There were also significant differences between the bacterial communities in burrows compared with un-bioturbated sediment. Increased activity and relative abundance of aerobic hydrocarbon-degrading bacteria in the burrows coincided with the significant reduction in hydrocarbon concentration in the bioturbated sediment. This study represents the first detailed assessment of the effect of bioturbation on total microbial communities in oil-contaminated sediments. In addition, it further shows that bioturbation is a significant factor in determining microbial diversity within polluted sediments and plays an important role in stimulating bioremediation. PMID:25858418

  2. Lizard Island Polychaete Workshop: sampling sites and a checklist of polychaetes.

    PubMed

    Ribas, Julia; Hutchings, Pat

    2015-01-01

    In August 2013, a two week polychaete workshop was held at Lizard Island, Great Barrier Reef. Twenty-one sites representing 121 collection events were sampled for polychetes around Lizard and on the Outer Barrier. Workshop participants sorted polychaetes to family and each participant received on loan selected families to work up. This Zootaxa monograph describes 91 new species, 67 new records for Lizard Island, and 19 for Australia. Details regarding the habitats and locations are provided in Table 2 together with two maps (Figs 1, 2) showing sampling locations. In this paper we also list previously collected polychaete material from the region together with any published records for families which are not included in this volume. PMID:26624064

  3. Chronic sublethal effects of San Francisco Bay sediments on nereis (neanthes) arenaceodentata; bioaccumulation from bedded sediments. Final report

    SciTech Connect

    Moore, D.; Dillon, T.M.

    1993-09-01

    In previous studies with San Francisco Bay sediments, minimal chronic sublethal effects were detected (Miscellaneous Paper D-93-1 and another Miscellaneous Paper in preparation by Moore and Dillon). To ensure that the lack of effects was not due to a lack of contaminant uptake, a bioaccumulation experiment was conducted. Bioaccumulation from bedded sediments was evaluated following a 9-week exposure with the marine polychaete worm Nereis (Neanthes) arenaceodentata. Two sediments were evaluated, a contaminated San Francisco Bay test sediment and a clean control sediment from Sequim, WA. Animals were exposed as early juveniles through adulthood. Tissues were analyzed for metals, polyaromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), and pesticides. Worms exposed to the contaminated San Francisco Bay sediment had significantly higher tissue residues of silver (0.30 mg/kg dry weight) and tributyltin (0.298 mg/kg dry weight). Conversely, tissue residues of control animals were significantly higher in cadmium (0.67 mg/kg dry weight) and lead (1.89 mg/kg dry weight). Small Amounts (0.02 mg/kg dry weight) of aldrin and dieldrin were measured in worms exposed to the contaminated sediment, while dieldrin and 8-BHC were found in Bioaccumulation, Neanthes, Chronic sublethal, San Francisco Bay, Dredged, Material, Sediment.

  4. Reproduction, population dynamics and production of Nereis falsa (Nereididae: Polychaeta) on the rocky coast of El Kala National Park, Algeria

    NASA Astrophysics Data System (ADS)

    Daas, Tarek; Younsi, Mourad; Daas-Maamcha, Ouided; Gillet, Patrick; Scaps, Patrick

    2011-06-01

    The polychaete Nereis falsa Quatrefages, 1866 is present in the area of El Kala National Park on the East coast of Algeria. Field investigations were carried out from January to December 2007 to characterize the populations' reproductive cycle, secondary production and dynamics. Reproduction followed the atokous type, and spawning occured from mid-June to the end of August/early September when sea temperature was highest (20-23°C). The diameter of mature oocytes was approximately 180 μm. Mean lifespan was estimated to about one year. In 2007, the mean density was 11.27 ind. m-2 with a minimum of 7.83 ind. m-2 in April and a maximum of 14.5 ind. m-2 in February. The mean annual biomass was 1.36 g m-2 (fresh weight) with a minimum of 0.86 g m-2 in December and a maximum of 2.00 g m-2 in June. The population consisted of two cohorts distinguishable from size frequency distributions. One cohort corresponded to the recruitment of 2006 and the other appeared during the study period in September 2007. The annual production of N. falsa was 1.45 g m-2 year-1, and the production/biomass ratio was 1.07 year-1.

  5. EFFECT OF DIFFERENT POLLUTANTS ON ECOLOGICALLY IMPORTANT POLYCHAETE WORMS

    EPA Science Inventory

    The procedures for culturing marine polychaetous annelids from egg to egg under laboratory conditions were described. A manual was prepared detailing the procedures used in culturing 12 species of polychaetes. The effects of heavy metals and the water soluble fractions of petrole...

  6. Trophic structure of polychaetes around an offshore gas platform.

    PubMed

    Punzo, E; Strafella, P; Scarcella, G; Spagnolo, A; De Biasi, A M; Fabi, G

    2015-10-15

    The distribution of polychaetes associated with an offshore gas platform built on a muddy-sandy bottom in the northern Adriatic Sea was investigated with emphasis on their feeding structure. Polychaete species were collected at different distances from the rig using a Van Veen grab. Assessment of the polychaete community and trophic groups for impacts related to the presence of the platform demonstrated significantly different abundances at rising distances from the rig. The present findings highlight an effect of the rig on the spatial distribution of polychaete assemblages. Even though the effects of gas platforms on surrounding benthic communities have been investigated in the Adriatic Sea, no studies have addressed the distribution of polychaete trophic groups along a gradient based on distance from the rig. PMID:26219685

  7. Identification and Characterization of Plant Cell Death-Inducing Secreted Proteins From Ustilaginoidea virens.

    PubMed

    Fang, Anfei; Han, Yanqing; Zhang, Nan; Zhang, Min; Liu, Lijuan; Li, Shuai; Lu, Fen; Sun, Wenxian

    2016-05-01

    Ustilaginoidea virens (Cooke) Takah (telemorph Villosiclava virens) is an ascomycetous fungus that causes rice false smut, one of the most important rice diseases. Fungal effectors often play essential roles in host-pathogen coevolutionary interactions. However, little is known about the functions of U. virens effectors. Here, we performed functional studies on putative effectors in U. virens and demonstrated that 13 of 119 putative effectors caused necrosis or necrosis-like phenotypes in Nicotiana benthamiana. Among them, 11 proteins were confirmed to be secreted, using a yeast secretion system, and the corresponding genes are all highly induced during infection, except UV_44 and UV_4753. Eight secreted proteins were proven to trigger cell death or defenses in rice protoplasts and the secretion signal of these proteins is essential for their cell death-inducing activity. The ability of UV_44 and UV_1423 to trigger cell death is dependent on the predicted serine peptidase and ribonuclease catalytic active sites, respectively. We demonstrated that UV_1423 and UV_6205 are N-glycosylated proteins, which glycosylation has different impacts on their abilities to induce cell death. Collectively, the study identified multiple secreted proteins in U. virens with specific structural motifs that induce cell death or defense machinery in nonhost and host plants. PMID:26927000

  8. Optimization of extraction of phenolics from leaves of Ficus virens *

    PubMed Central

    Chen, Xiao-xin; Wu, Xiao-bing; Chai, Wei-ming; Feng, Hui-ling; Shi, Yan; Zhou, Han-tao; Chen, Qing-xi

    2013-01-01

    In this research, the conditions for extraction of phenolics from leaves of Ficus virens were optimized using response surface methodology (RSM). The extraction abilities of phenolics (EAP) and flavonoids (EAF), the 2,2-diphenyl-1-pierylhydrazyl (DPPH) free-radical scavenging potential, and the ferric reducing/antioxidant power (FRAP) were used as quality indicators. The results of single-factor experiments showed that temperature, ethanol concentration, extraction time, and the number of extraction cycles were the main influencing variables, and these provided key information for the central composite design. The results of RSM fitted well to a second degree polynomial model and more than 98% of the variability was explained. The ideal extraction conditions for EAP, EAF, DPPH free-radical scavenging potential, and FRAP were obtained. Considering the four quality indicators overall, the ideal extraction conditions were 58% ethanol at 57 °C for 37 min with three extraction cycles. At the ideal extraction conditions, the values of EAP, EAF, DPPH free-radical scavenging potential, and FRAP were 5.72%, 3.09%, 58.88 mg ascorbic acid equivalent (AAE)/g dry weight (DW), and 15.86 mg AAE/g DW, respectively. In addition, linear correlations were observed between EAP, EAF, and antioxidant potential. PMID:24101207

  9. Trophic transfer of trace metals: Subcellular compartmentalization in a polychaete and assimilation by a decapod crustacean

    USGS Publications Warehouse

    Rainbow, P.S.; Poirier, L.; Smith, B.D.; Brix, K.V.; Luoma, S.N.

    2006-01-01

    The chemical form of accumulated trace metal in prey is important in controlling the bioavailataility of dietary metal to a predator. This study investigated the trophic transfer of radiolabelled Ag, Cd and Zn from the polychaete worm Nereis diversicolor to the decapod crustacean Palaemonetes varians. We used 2 populations of worms with different proportions of accumulated metals in different subcellular fractions as prey, and loaded the worms with radiolabelled metals either from sediment or from solution. Accumulated radiolabelled metals were fractionated into 5 components : metal-rich granules (MRG), cellular debris, organelles, metallothionein-like proteins (MTLP), and other (heat-sensitive) proteins (HSP). Assimilation efficiencies (AE) of the metals by P. varians were measured from the 4 categories of prey (i.e. 2 populations, radiolabelled from sediment or solution). There were significant differences for each metal between the AEs from the different prey categories, confirming that origin of prey and route of uptake of accumulated trace metal will cause intraspecific differences in subsequent metal assimilation. Correlations were sought between AEs and selected fractions or combinations of fractions of metals in the prey-MRG, Trophically Available Metal (TAM = MTLP + HSP + organelles) and total protein (MTLP + HSP). TAM explained 28% of the variance in AEs for Ag, but no consistent relationships emerged between AEs and TAM or total protein when the metals were considered separately. AEs did, however, show significant positive regressions with both TAM and total protein when the 3 metals were considered together, explaining only about 21 % of the variance in each case. A significant negative relationship was observed between MRG and AE for all metals combined. The predator (P. varians) can assimilate dietary metal from a range of the fractions binding metals in the prey (N. diversicolor), with different assimilation efficiencies summated across these

  10. A paralog of the proteinaceous elicitor sm1 affects colonization of maize roots by Trichoderma virens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The biocontrol agent, Trichoderma virens, has the ability to protect plants from pathogens by eliciting plant defense responses, involvement in mycoparasitism, or secreting antagonistic secondary metabolites. SM1, an elicitor of induced systemic resistance (ISR), was found to have three paralogs wi...

  11. Morphological structure of propagules and electrophoretic karyotype analysis of false smut Villosiclava virens in rice.

    PubMed

    Fu, Rongtao; Ding, Lei; Zhu, Jun; Li, Ping; Zheng, Ai-Ping

    2012-04-01

    The target pathogen Villosiclava virens (teleomorph: claviceps oryzae-sativae) was isolated from the infected rice, where it caused false smut. In our study, the forming processes of the chlamydospores, chlamydospore balls, conidiospores, and secondary conidiospores during the asexual reproduction were observed more precisely and in greater detail than previous descriptions. The microstructure of the infected rice kernel showed that the outer dense chlamydospores piled around the false smut balls grown on XBZ medium; moreover the sclerotia consisting of dense mycelium were found. The different morphology was observed across the different growing conditions. In addition, we observed the nuclear numbers of both the conidiospores and hyphae using 4',6-diamidino-2-phenylindole (DAPI) staining. Because the fungus has small chromosomes and the numbers were not previously known, we analyzed the electrophoretic karyotype using a pulsed field gel electrophoresis (PFGE) technique. The results showed that V. virens has at least 10 chromosomes ranging in size from 0.6 kb to 6 Mb. The V. virens genome size is estimated to be 23 Mb. Here, we report the morphological characteristics of the fungus and the process of asexual spores forming asexual propagules, along with the first analyze the molecular karyotype of V. virens. These results supply a foundation for further study of the pathogenicity and biology of this devastating pathogen. PMID:22538655

  12. Palila (Loxioides bailleui) fledgling fed by Hawai'i 'Amakihi (Hemignathus virens)

    USGS Publications Warehouse

    Farmer, C.; Frederick, B.A.; Banko, P.C.; Stephens, R.M.; Snow, C.W.

    2008-01-01

    We observed an adult male Hawai'i 'Amakihi (Hemignathus virens) repeatedly feed a fledgling Palila (Loxioides bailleui). We observed 16-19 food provisions during 14 hrs of observation between 21 and 29 June 2006. The presumed biological parents were frequently seen nearby, but adult Palila were not observed feeding the fledgling.

  13. Ability of secondary metabolites from trichoderma virens to mediate communication during mutualistic or pathogenic interactions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A bioinformatic study was conducted to identify the putative genes in the biocontrol agent Trichoderma virens that encode for non-ribosomal peptide synthetases (NRPS). Gene expression analysis of 22 putative NRPSs and 4 NRPS/PKS (polyketide synthase) hybrid enzymes was conducted in the presence and...

  14. Chronic sublethal effects of San Francisco Bay sediments on nereis (neanthes) arenaceodentata; effect of food ration on sediment toxicity. Final report

    SciTech Connect

    Moore, D.W.; Dillon, T.M.

    1993-09-01

    This report is designed to address concerns regarding the effect of food ration on toxicity during chronic sublethal sediment bioassays. To this end, a contaminated San Francisco Bay sediment and a clean control sediment were evaluated in a chronic sublethal test under a series of different food rations, with the marine polychaete worm Nereis (Neanthes) arenaceodentata. Animals were exposed from early juvenile stage through the onset of gametogenesis. Treatments were 2.OX, 1.OX, 0.5X, and 0.25X where X is the recommended food ration for laboratory cultures. Test end points were survival, growth, and reproduction. The contaminated sediment was a composite of several cores taken to project depth (38 ft (11.6 m) below mean low water mark) from an area in Oakland Inner Harbor known to be contaminated with polycyclic aromatic hydrocarbons and metals. Comparisons were made with a clean control sediment. The control sediment is used in the laboratory cultures of N. arenaceodentata and was collected from Sequim, WA. Mean percent survival of Neanthes was high (>90 percent) in both the contaminated and control sediment across all food ration treatments. Individual wet weights were significantly reduced with decreasing food ration in both contaminated and control sediments. Significant differences in wet weight between sediment types were observed at the 1.OX, 0.5X, and 0.25X rations. Reproduction (fecundity and emergent juvenile (EJ) production) was also Chronic sublethal, Neanthes, Dredged material, San Francisco Bay, Food ration, Sediment.

  15. Bioaccumulation, subcellular distribution and toxicity of sediment-associated copper in the ragworm Nereis diversicolor: The relative importance of aqueous copper, copper oxide nanoparticles and microparticles.

    PubMed

    Thit, Amalie; Banta, Gary T; Selck, Henriette

    2015-07-01

    The sediment-dwelling ragworm, Nereis diversicolor was exposed to sediment spiked with aqueous Cu (CuAq, CuCl2), CuO nanoparticles (CuONP) or CuO microparticles (CuOMicro) at 150 μg Cu g(-1) dw sediment for 10d. Exposures to CuAq and CuOMicro caused mortality (62.5 and 37.5%, respectively), whereas mean burrowing time increased during exposure to CuAq and CuONP from 0.12 h (controls) to 19.3 and 12.2 h, respectively. All Cu treatments bioaccumulated, especially CuAq (up to 4 times more than the other treatments). Cu was roughly equally distributed among the five subcellular fractions in controls and worms exposed to CuONP or CuOMicro. In contrast, ≈50% of accumulated Cu in CuAq exposed worms was found in metal rich granules and significantly more Cu was present in heat-denatured proteins and organelles than in worms exposed to CuOMicro or in controls. Our results suggest that Cu form affects its bioaccumulation and subsequent toxicity and detoxification in a polychaete like N. diversicolor. PMID:25800937

  16. Comparative transcriptome analysis of fruiting body and sporulating mycelia of Villosiclava virens reveals genes with putative functions in sexual reproduction.

    PubMed

    Yu, Jun-Jie; Yu, Mi-Na; Nie, Ya-Feng; Sun, Wen-Xian; Yin, Xiao-Le; Zhao, Jie; Wang, Ya-Hui; Ding, Hui; Qi, Zhong-Qiang; Du, Yan; Huang, Li; Liu, Yong-Feng

    2016-08-01

    Sexual reproduction of heterothallic clavicipitaceous fungus Villosiclava virens (anamorph: Ustilaginoidea virens) generates ascospores, which is considered as primary infection source of rice false smut disease. However, little is known about the molecular underpinnings of sexual reproduction in V. virens. In this study, transcriptomes of V. virens in fruiting body (FB) and sporulating mycelia (SM) were compared using Illumina paired-end sequencing technology. A total of 33,384,588 and 23,765,275 clean reads of FB and SM transcriptome profiles could be used to map cDNA of V. virens, respectively. We evaluated the gene expression variations between FB and SM, a total of 488 genes therein were significantly higher expressed in FB than SM, and 342 genes were significantly higher expressed genes in SM than FB. These differentially expressed genes were annotated using Kyoto Encyclopedia of Genes and Genomes and Gene Ontology databases. Several genes were found to specifically function in sexual reproduction, involving in mating type, pheromone synthesis, signaling transduction, transcription factors, and meiosis; additionally, a few of genes were presumed to function in conidia sporulation and infection. Comparative transcriptome analysis of V. virens during FB and SM provided an overview of gene expression profiles at the transcriptional level and provided hints to better understand the molecular mechanisms of sexual development. Additionally, the data presented here also proved benefit for mining of essential genes contributing to sexual conidiation and infection. PMID:26905382

  17. Burrow extension with a proboscis: mechanics of burrowing by the glycerid Hemipodus simplex.

    PubMed

    Murphy, Elizabeth A K; Dorgan, Kelly M

    2011-03-15

    Burrowing marine infauna are morphologically diverse and ecologically important as ecosystem engineers. The polychaetes Nereis virens and Cirriformia moorei extend their burrows by crack propagation. Nereis virens does so by everting its pharynx and C. moorei, lacking an eversible pharynx or proboscis, uses its hydrostatic skeleton to expand its anterior. Both behaviors apply stress to the burrow wall that is amplified at the tip of the crack, which extends by fracture. That two species with such distinct morphologies and life histories both burrow by fracturing sediment suggests that this mechanism may be widespread among burrowers. We tested this hypothesis with the glycerid polychaete Hemipodus simplex, which has an eversible proboscis that is much longer and everts more rapidly than the pharynx of N. virens. When the proboscis is fully everted, the tip flares out wider than the rest of the proboscis, creating a shape and applying a stress distribution similar to that of N. virens and resulting in relatively large forces near the tip of the crack. These forces are larger than necessary to extend the crack by fracture and are surprisingly uncorrelated with the resulting stress amplification at the crack tip, which is also larger than necessary to extend the burrow by fracture. These large forces may plastically deform the mud, allowing the worm to build a semi-permanent burrow. Our results illustrate that similar mechanisms of burrowing are used by morphologically different burrowers. PMID:21346130

  18. Villosiclava virens infects specifically rice and barley stamen filaments due to the unique host cell walls.

    PubMed

    Yong, Ming-Li; Fan, Lin-Lin; Li, Dan-Yang; Liu, Yi-Jia; Cheng, Fang-Min; Xu, Ying; Wang, Zheng-Yi; Hu, Dong-Wei

    2016-09-01

    Rice false smut, caused by the fungal pathogen Villosiclava virens, is one of the most important rice diseases in the world. Previous studies reported that the pathogen has less number of cell wall-degraded genes and attacks dominantly rice stamen filaments and extends intercellularly. To reveal why the fungus infects plant stamen filaments, inoculation test on barley was carried out with the similar protocol to rice. The experimental results showed that the fungus could penetrate quickly into barley stamen filaments and extends both intracellularly and intercellularly, usually resulting in severe damage of the stamen filament tissues. It also attacked young barley lodicules and grew intercellularly by chance. The light microscopic observations found that the epidermal and cortex cells in barley stamen filaments arranged loosely with very thick cell walls and large cell gaps. Cellulose microfibrils in barley stamen filament cell walls arranged very sparsely so that the cell walls looked like transparent. The cell walls were very soft and flexible, and often folded. However, V. virens extended dominantly in the noncellulose regions and seemed never to degrade microfibrils in barley and rice cell walls. This suggested that the unique structures of rice and barley stamen filaments should be fit for their function of elongation in anthesis, and also endow with the susceptibility to the fungus, V. virens. PMID:27357263

  19. Neurogenesis suggests independent evolution of opercula in serpulid polychaetes

    PubMed Central

    2009-01-01

    Background The internal phylogenetic relationships of Annelida, one of the key lophotrochozoan lineages, are still heavily debated. Recent molecular analyses suggest that morphologically distinct groups, such as the polychaetes, are paraphyletic assemblages, thus questioning the homology of a number of polychaete morphological characters. Serpulid polychaetes are typically recognized by having fused anterior ends bearing a tentacular crown and an operculum. The latter is commonly viewed as a modified tentacle (= radiole) and is often used as an important diagnostic character in serpulid systematics. Results By reconstructing the developmental neuroanatomy of the serpulid polychaete Spirorbis cf. spirorbis (Spirorbinae), we found striking differences in the overall neural architecture, the innervation pattern, and the ontogenetic establishment of the nervous supply of the operculum and the radioles in this species. Accordingly, the spirorbin operculum might not be homologous to the radioles or to the opercula of other serpulid taxa such as Serpula and Pomatoceros and is thus probably not a part of the tentacular crown. Conclusion We demonstrate that common morphological traits such as the prostomial appendages may have evolved independently in respective serpulid sublineages and therefore require reassessment before being used in phylogenetic analyses. Our findings corroborate recent molecular studies that argue for a revision of serpulid systematics. In addition, our data on Spirorbis neurogenesis provide a novel set of characters that highlight the developmental plasticity of the segmented annelid nervous system. PMID:19930667

  20. Expanding the ecotoxicological toolbox: the inclusion of polychaete reproductive endpoints.

    PubMed

    Lewis, Ceri; Watson, Gordon J

    2012-04-01

    In the last 15 years the diversity of pollutants and routes of impact have increased. However, the polychaete families, species and endpoints investigated have remained fairly constant. Reproductive outputs are more ecologically relevant than adult physiological or biochemical changes. Nevertheless, there remains a paucity of data on the reproductive responses of the popular species to pollutants which limits our ability to understand the true ecological impacts of such contaminants on natural populations. We highlight the current knowledge gaps in our understanding of the impacts of pollutants on the 'model' species' reproductive biology and therefore the potential ecological impacts of such contaminants on their natural populations, and the potential benefits of a wider use of polychaete reproductive endpoints for ecotoxicological assessments. The following priority areas are suggested for inclusion in the polychaete ecotoxicology toolbox: 1. Include reproductive endpoints as assessments of ecotoxicology for the traditional 'model' species and those that have different reproductive traits to ensure broad ecological relevance. 2. Nereids and Arenicola marina should be used to investigate the interaction of pollutants with the endocrine/environmental control of reproduction. 3. Polychaetes are ideal for addressing the under representation of male eco-toxicity effects. 4. Emerging pollutants should be assessed with reproductive endpoints together with the traditional biomarkers. 5. Effects of pollutants on larval behaviour need to be explored considering the limited but equivocal results so far. PMID:21872922

  1. Identification of pathogenicity-related genes in the rice pathogen Ustilaginoidea virens through random insertional mutagenesis.

    PubMed

    Yu, Mina; Yu, Junjie; Hu, Jiankun; Huang, Lei; Wang, Yahui; Yin, Xiaole; Nie, Yafeng; Meng, Xiangkun; Wang, Weiduo; Liu, Yongfeng

    2015-03-01

    Agrobacterium tumefaciens-mediated transformation (ATMT) is becoming a popular effective system as an insertional mutagenesis tool in filamentous fungi. To gain more insight into the cellular and molecular mechanisms in the pathogenesis of Ustilaginoidea virens, the causal agent of rice false smut disease, a T-DNA insertion mutant library of U. virens was established using ATMT. We optimized a range of conditions to improve the transformation efficiency. Transformants were most effectively obtained when the optimal co-cultivation time is 72h, with 50μM AS in medium and 100μl A. tumefaciens for co-cultivation, leading to the production of 160-185 hygromycin B resistant transformants per 1×10(5) conidia. Southern blot analysis indicated that 58.14% of transformants had a single T-DNA copy. Among 5600 transformants tested for virulence, 37 mutants with reproducible pathogenic defects were obtained. The flanking sequences of three avirulent tranformants (B20, B1015 and B1465) and two pathogenicity-reduced transformants (B726 and B785) were amplified by high-efficiency thermal asymmetric interlaced PCR. Sequence analyses revealed that single T-DNA insertion in mutant B20 targeted the coding region of a gene encoding a protein highly similar to SUN family protein, and in mutant B726 targeted upstream of a gene with unknown function. The two T-DNA insertion sites in mutant B785 were found in the coding region of a gene encoding C6 transcription factor, but failed in amplified flanking sequence of another T-DNA. Chromosomal rearrangement occurred in the genome of mutant B1016 and B1465 with single T-DNA insertion. Among avirulent mutants, B20 showed altered colony growth and pigmentation. The T-DNA insert in B20 was detected in the coding region of a gene named UvSUN2. Morphophysiological characterization analysis suggested that UvSUN2 might be a virulence factor, and possibly required for proper fungal growth, cell wall construction, and stress responses in U. virens

  2. TCDD/TCDF levels in bioaccumulation test tissues and their corresponding sediments

    SciTech Connect

    Schrock, M.E.; Barrows, E.S.

    1995-12-31

    Sediments from eight highly urbanized, industrial areas were analyzed for 2,3,7,8-tetrachlorodibenzo-p-dioxin and 2,3,7,8 tetrachlorodibenzofuran (TCDD/TCDF) contamination. The polychaete Nereis virens was exposed to the contaminated sediment for 28 days and then analyzed for TCDD/TCDF to evaluate the potential bioaccumulation of these contaminants, Levels of TCDD/TCDF accumulated in N. virens in general increased as the amount of sediment contamination increased and were significantly greater than levels in N. virens exposed to uncontaminated sediment. In addition, accumulation factors were calculated based on the levels of TCDD/TCDF in the test organisms and sediments, the organism lipid content, and the sediment total organic carbon content to predict the maximum amount of TCDD/TCDF likely to be accumulated from the sediments.

  3. Survey and analysis of simple sequence repeats in the Ustilaginoidea virens genome and the development of microsatellite markers.

    PubMed

    Yu, Mina; Yu, Junjie; Li, Huanhuan; Wang, Yahui; Yin, Xiaole; Bo, Huiwen; Ding, Hui; Zhou, Yuxin; Liu, Yongfeng

    2016-07-01

    Ustilaginoidea virens is the causal agent of rice false smut, causing quantitative and qualitative losses in rice industry. However, the development and application of simple sequence repeat (SSR) markers for genetic diversity studies in U. virens were limited. This study is the first to perform large-scale development of SSR markers of this pathogen at the genome level, to (1) compare these SSR markers with those of other fungi, (2) analyze the pattern of the SSRs, and (3) obtain more informative genetic markers. U. virens is rich in SSRs, and 13,778 SSRs were identified with a relative abundance of 349.7SSRs/Mb. The most common motifs in the genome or in noncoding regions were mononucleotides, whereas trinucleotides in coding sequences. A total of 6 out of 127 primers were randomly selected to be used to analyze 115 isolates, and these 6 primers showed high polymorphism in U. virens. This study may serve as an important resource for molecular genetic studies in U. virens. PMID:26992636

  4. A pyritized polychaete from the Devonian of Ontario

    PubMed Central

    Farrell, Úna C; Briggs, Derek E.G

    2006-01-01

    A polychaete from the Middle Devonian Arkona Shale at Hungry Hollow, Arkona, Ontario is preserved in three dimensions in pyrite. The prostomium bears a single median antenna, a pair of lateral antennae and a pair of ventral palps. It is assumed to be fused to a reduced peristomium. The anteriormost three pairs of trunk appendages are modified as tentacular cirri, the third long and biramous. The remainder of the finely annulated trunk bears at least 21 similar biramous parapodia, some of which preserve evidence of chaetae. The postsegmental pygidium is very small and may bear up to two pairs of cirri. The polychaete, Arkonips topororum, falls within the Palpata, Aciculata, among the crown group Phyllodocida. Its remarkable preservation highlights the potential of the Arkona Shale to yield other examples of soft-tissue preservation. PMID:17476769

  5. An Early Cambrian stem polychaete with pygidial cirri

    PubMed Central

    Vinther, Jakob; Eibye-Jacobsen, Danny; Harper, David A. T.

    2011-01-01

    The oldest annelid fossils are polychaetes from the Cambrian Period. They are representatives of the annelid stem group and thus vital in any discussion of how we polarize the evolution of the crown group. Here, we describe a fossil polychaete from the Early Cambrian Sirius Passet fauna, Pygocirrus butyricampum gen. et sp. nov., with structures identified as pygidial cirri, which are recorded for the first time from Cambrian annelids. The body is slender and has biramous parapodia with chaetae organized in laterally oriented bundles. The presence of pygidial cirri is one of the characters that hitherto has defined the annelid crown group, which diversified during the Cambrian–Ordovician transition. The newly described fossil shows that this character had already developed within the total group by the Early Cambrian. PMID:21733871

  6. An Early Cambrian stem polychaete with pygidial cirri.

    PubMed

    Vinther, Jakob; Eibye-Jacobsen, Danny; Harper, David A T

    2011-12-23

    The oldest annelid fossils are polychaetes from the Cambrian Period. They are representatives of the annelid stem group and thus vital in any discussion of how we polarize the evolution of the crown group. Here, we describe a fossil polychaete from the Early Cambrian Sirius Passet fauna, Pygocirrus butyricampum gen. et sp. nov., with structures identified as pygidial cirri, which are recorded for the first time from Cambrian annelids. The body is slender and has biramous parapodia with chaetae organized in laterally oriented bundles. The presence of pygidial cirri is one of the characters that hitherto has defined the annelid crown group, which diversified during the Cambrian-Ordovician transition. The newly described fossil shows that this character had already developed within the total group by the Early Cambrian. PMID:21733871

  7. Mineralization of Alvinella polychaete tubes at hydrothermal vents.

    PubMed

    Georgieva, M N; Little, C T S; Ball, A D; Glover, A G

    2015-03-01

    Alvinellid polychaete worms form multilayered organic tubes in the hottest and most rapidly growing areas of deep-sea hydrothermal vent chimneys. Over short periods of time, these tubes can become entirely mineralized within this environment. Documenting the nature of this process in terms of the stages of mineralization, as well as the mineral textures and end products that result, is essential for our understanding of the fossilization of polychaetes at hydrothermal vents. Here, we report in detail the full mineralization of Alvinella spp. tubes collected from the East Pacific Rise, determined through the use of a wide range of imaging and analytical techniques. We propose a new model for tube mineralization, whereby mineralization begins as templating of tube layer and sublayer surfaces and results in fully mineralized tubes comprised of multiple concentric, colloform, pyrite bands. Silica appeared to preserve organic tube layers in some samples. Fine-scale features such as protein fibres, extracellular polymeric substances and two types of filamentous microbial colonies were also found to be well preserved within a subset of the tubes. The fully mineralized Alvinella spp. tubes do not closely resemble known ancient hydrothermal vent tube fossils, corroborating molecular evidence suggesting that the alvinellids are a relatively recent polychaete lineage. We also compare pyrite and silica preservation of organic tissues within hydrothermal vents to soft tissue preservation in sediments and hot springs. PMID:25556400

  8. Commensal symbiosis between agglutinated polychaetes and sulfate-reducing bacteria.

    PubMed

    Guido, A; Mastandrea, A; Rosso, A; Sanfilippo, R; Tosti, F; Riding, R; Russo, F

    2014-05-01

    Pendant bioconstructions occur within submerged caves in the Plemmirio Marine Protected Area in SE Sicily, Italy. These rigid structures, here termed biostalactites, were synsedimentarily lithified by clotted-peloidal microbial carbonate that has a high bacterial lipid biomarker content with abundant compounds derived from sulfate-reducing bacteria. The main framework builders are polychaete serpulid worms, mainly Protula with subordinate Semivermilia and Josephella. These polychaetes have lamellar and/or fibrillar wall structure. In contrast, small agglutinated terebellid tubes, which are a minor component of the biostalactites, are discontinuous and irregular with a peloidal micritic microfabric. The peloids, formed by bacterial sulfate reduction, appear to have been utilized by terebellids to construct tubes in an environment where other particulate sediment is scarce. We suggest that the bacteria obtained food from the worms in the form of fecal material and/or from the decaying tissue of surrounding organisms and that the worms obtained peloidal micrite with which to construct their tubes, either as grains and/or as tube encompassing biofilm. Peloidal worm tubes have rarely been reported in the recent but closely resemble examples in the geological record that extend back at least to the early Carboniferous. This suggests a long-lived commensal relationship between some polychaete worms and heterotrophic, especially sulfate-reducing, bacteria. PMID:24636469

  9. Mineralization of Alvinella polychaete tubes at hydrothermal vents

    PubMed Central

    Georgieva, M N; Little, C T S; Ball, A D; Glover, A G

    2015-01-01

    Alvinellid polychaete worms form multilayered organic tubes in the hottest and most rapidly growing areas of deep-sea hydrothermal vent chimneys. Over short periods of time, these tubes can become entirely mineralized within this environment. Documenting the nature of this process in terms of the stages of mineralization, as well as the mineral textures and end products that result, is essential for our understanding of the fossilization of polychaetes at hydrothermal vents. Here, we report in detail the full mineralization of Alvinella spp. tubes collected from the East Pacific Rise, determined through the use of a wide range of imaging and analytical techniques. We propose a new model for tube mineralization, whereby mineralization begins as templating of tube layer and sublayer surfaces and results in fully mineralized tubes comprised of multiple concentric, colloform, pyrite bands. Silica appeared to preserve organic tube layers in some samples. Fine-scale features such as protein fibres, extracellular polymeric substances and two types of filamentous microbial colonies were also found to be well preserved within a subset of the tubes. The fully mineralized Alvinella spp. tubes do not closely resemble known ancient hydrothermal vent tube fossils, corroborating molecular evidence suggesting that the alvinellids are a relatively recent polychaete lineage. We also compare pyrite and silica preservation of organic tissues within hydrothermal vents to soft tissue preservation in sediments and hot springs. PMID:25556400

  10. Ustilaginoidea virens infection of rice in Arkansas: Toxicity of false smut galls, their extracts and the Ustiloxin fraction

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cool, wet conditions in the southern U.S. during the maturing stages of rice in 1998 contributed to outbreaks of false smut caused by Ustilaginoidea virens. Water extracts of false smut galls in Asia have been reported to contain ustiloxin toxins, cyclic peptide antibiotics that interfered with mi...

  11. UvHOG1 is important for hyphal growth and stress responses in the rice false smut fungus Ustilaginoidea virens

    PubMed Central

    Zheng, Dawei; Wang, Yi; Han, Yu; Xu, Jin-Rong; Wang, Chenfang

    2016-01-01

    Rice false smut caused by Ustilaginoidea virens is one of the most important diseases of rice worldwide. Although its genome has been sequenced, to date there is no report on targeted gene deletion in U. virens and no molecular studies on genetic mechanisms regulating the infection processes of this destructive pathogen. In this study, we attempted to generate knockout mutants of the ortholog of yeast HOG1 MAP kinase gene in U. virens. One Uvhog1 deletion mutant was identified after screening over 600 hygromycin-resistant transformants generated by Agrobacterium tumefaciens mediated transformation. The Uvhog1 mutant was reduced in growth rate and conidiation but had increased sensitivities to SDS, Congo red, and hyperosmotic stress. Deletion of UvHOG1 resulted in reduced expression of the stress response-related genes UvATF1 and UvSKN7. In the Uvhog1 mutant, NaCl treatment failed to stimulate the accumulation of sorbitol and glycerol. In addition, the Uvhog1 mutant had reduced toxicity on shoot growth in rice seed germination assays. Overall, as the first report of targeted gene deletion mutant in U. virens, our results showed that UvHOG1 likely has conserved roles in regulating stress responses, hyphal growth, and possibly secondary metabolism. PMID:27095476

  12. Ommexecha virens (Thunberg, 1824) and Descampsacris serrulatum (Serville, 1831) (Orthoptera, Ommexechidae): karyotypes, constitutive heterochromatin and nucleolar organizing regions

    PubMed Central

    Carvalho, D.B.; Rocha, M.F.; Loreto, V.; Silva, A.E.B.; Souza, M.J.

    2011-01-01

    Abstract Chromosomes of Ommexecha virens and Descampsacris serrulatum (Ommexechidae) were analyzed through conventional staining, C-banding, base specific fluorochromes, silver nitrate impregnation (AgNO3), and fluorescent in situ hybridization (FISH) with probe for 45S rDNA. The two species presented diploid number 2n= 23,X0 in males and acrocentric autosomes, except the pair one that presented submetacentric morphology. The X chromosome has distinct morphology in the two analyzed species, being a medium acrocentric in Ommexecha virens and large submetacentric in Descampsacris serrulatum. The C-banding revealed pericentromeric blocks of constitutive heterochromatin (CH) in all the chromosomes of Descampsacris serrulatum. For Ommexecha virens it was evidenced that the blocks of CH are preferentially located in the pericentromeric area (however some bivalents presents additional blocks) or in different positions. The staining with CMA3/DA/DAPI showed GC rich CH blocks (CMA3+) in some chromosomes of the two species. The nucleolar organizer regions (NORs) were located in the bivalents L2, S9, S10 of Ommexecha virens and M5, M6, M7, S11 of Descampsacris serrulatum. The FISH for rDNA showed coincident results with the pattern of active NORs revealed by AgNO3. This work presents the first chromosomal data, obtained through differential cytogenetics techniques in Ommexechidae, contributing to a better characterization of karyotypic evolution for this grasshopper family. PMID:24260624

  13. Occurrence, survival, and production levels of Trichoderma virens in soils of animal waste application sites in Mississippi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Population levels of T. virens, a plant disease biocontrol species, were assayed in soils from three farms in Mississippi where swine waste was applied to pastures, and from two farms where poultry litter was applied as a fertilizer to cotton. Assays of soil from each site with and without applied ...

  14. 40 CFR 180.1100 - Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 40 Protection of Environment 25 2013-07-01 2013-07-01 false Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance. 180.1100 Section 180.1100 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS TOLERANCES AND EXEMPTIONS FOR PESTICIDE CHEMICAL RESIDUES IN FOOD Exemptions From...

  15. 40 CFR 180.1100 - Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 40 Protection of Environment 25 2012-07-01 2012-07-01 false Gliocladium virens isolate GL-21; exemption from the requirement of a tolerance. 180.1100 Section 180.1100 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS TOLERANCES AND EXEMPTIONS FOR PESTICIDE CHEMICAL RESIDUES IN FOOD Exemptions From...

  16. Arabidopsis thaliana: A Model Host Plant to Study Plant–Pathogen Interaction Using Rice False Smut Isolates of Ustilaginoidea virens

    PubMed Central

    Andargie, Mebeaselassie; Li, Jianxiong

    2016-01-01

    Rice false smut fungus which is a biotrophic fungal pathogen causes an important rice disease and brings a severe damage where rice is cultivated. We established a new fungal-plant pathosystem where Ustilaginoidea virens was able to interact compatibly with the model plant Arabidopsis thaliana. Disease symptoms were apparent on the leaves of the plants after 6 days of post inoculation in the form of chlorosis. Cytological studies showed that U. virens caused a heavy infestation inside the cells of the chlorotic tissues. Development and colonization of aerial mycelia in association with floral organ, particularly on anther and stigma of the flowers after 3 weeks of post inoculation was evident which finally caused infection on the developing seeds and pod tissues. The fungus adopts a uniquely biotrophic infection strategy in roots and spreads without causing a loss of host cell viability. We have also demonstrated that U. virens isolates infect Arabidopsis and the plant subsequently activates different defense response mechanisms which are witnessed by the expression of pathogenesis-related genes, PR-1, PR-2, PR-5, PDF1.1, and PDF1.2. The established A. thaliana–U. virens pathosystem will now permit various follow-up molecular genetics and gene expression experiments to be performed to identify the defense signals and responses that restrict fungal hyphae colonization in planta and also provide initial evidence for tissue-adapted fungal infection strategies. PMID:26941759

  17. UvHOG1 is important for hyphal growth and stress responses in the rice false smut fungus Ustilaginoidea virens.

    PubMed

    Zheng, Dawei; Wang, Yi; Han, Yu; Xu, Jin-Rong; Wang, Chenfang

    2016-01-01

    Rice false smut caused by Ustilaginoidea virens is one of the most important diseases of rice worldwide. Although its genome has been sequenced, to date there is no report on targeted gene deletion in U. virens and no molecular studies on genetic mechanisms regulating the infection processes of this destructive pathogen. In this study, we attempted to generate knockout mutants of the ortholog of yeast HOG1 MAP kinase gene in U. virens. One Uvhog1 deletion mutant was identified after screening over 600 hygromycin-resistant transformants generated by Agrobacterium tumefaciens mediated transformation. The Uvhog1 mutant was reduced in growth rate and conidiation but had increased sensitivities to SDS, Congo red, and hyperosmotic stress. Deletion of UvHOG1 resulted in reduced expression of the stress response-related genes UvATF1 and UvSKN7. In the Uvhog1 mutant, NaCl treatment failed to stimulate the accumulation of sorbitol and glycerol. In addition, the Uvhog1 mutant had reduced toxicity on shoot growth in rice seed germination assays. Overall, as the first report of targeted gene deletion mutant in U. virens, our results showed that UvHOG1 likely has conserved roles in regulating stress responses, hyphal growth, and possibly secondary metabolism. PMID:27095476

  18. Arabidopsis thaliana: A Model Host Plant to Study Plant-Pathogen Interaction Using Rice False Smut Isolates of Ustilaginoidea virens.

    PubMed

    Andargie, Mebeaselassie; Li, Jianxiong

    2016-01-01

    Rice false smut fungus which is a biotrophic fungal pathogen causes an important rice disease and brings a severe damage where rice is cultivated. We established a new fungal-plant pathosystem where Ustilaginoidea virens was able to interact compatibly with the model plant Arabidopsis thaliana. Disease symptoms were apparent on the leaves of the plants after 6 days of post inoculation in the form of chlorosis. Cytological studies showed that U. virens caused a heavy infestation inside the cells of the chlorotic tissues. Development and colonization of aerial mycelia in association with floral organ, particularly on anther and stigma of the flowers after 3 weeks of post inoculation was evident which finally caused infection on the developing seeds and pod tissues. The fungus adopts a uniquely biotrophic infection strategy in roots and spreads without causing a loss of host cell viability. We have also demonstrated that U. virens isolates infect Arabidopsis and the plant subsequently activates different defense response mechanisms which are witnessed by the expression of pathogenesis-related genes, PR-1, PR-2, PR-5, PDF1.1, and PDF1.2. The established A. thaliana-U. virens pathosystem will now permit various follow-up molecular genetics and gene expression experiments to be performed to identify the defense signals and responses that restrict fungal hyphae colonization in planta and also provide initial evidence for tissue-adapted fungal infection strategies. PMID:26941759

  19. The Impact of Sewage Discharge in a Marine Embayment: A Stable Isotope Reconnaissance

    NASA Astrophysics Data System (ADS)

    Waldron, S.; Tatner, P.; Jack, I.; Arnott, C.

    2001-01-01

    Stable isotope analyses, δ 13C and δ 15N, of sewage tolerant benthic invertebrates seaward of a sewage effluent discharged in a marine embayment, the Firth of Forth, East Scotland, suggest that the polychaete worm Nereis virens is a suitable species for identifying biological assimilation of sewage derived organic matter. The sewage isotopic signal is not strongly recorded in the sediment due to the combined action of tidal movement, wind-induced wave action and benthic invertebrate grazing of particulate matter on the sea-bed. δ 13C of the plankton is significantly different from the effluent, but δ 15N is not which precludes its use as a trace.

  20. Effects of chronic avian malaria (Plasmodium relictum) infection on reproductive success of Hawaii Amakihi (Hemignathus virens)

    USGS Publications Warehouse

    Kilpatrick, A.M.; Lapointe, D.A.; Atkinson, C.T.; Woodworth, B.L.; Lease, J.K.; Reiter, M.E.; Gross, K.

    2006-01-01

    We studied the effects of chronic avian malaria (Plasmodium relictum) infections on the reproductive success of a native Hawaiian honeycreeper, Hawaii Amakihi (Hemignathus virens). Chronic malaria infections in male and female parents did not significantly reduce reproductive success as measured by clutch size, hatching success, fledging mass, number of nestlings fledged, nesting success (daily survival rate), and minimum fledgling survival. In fact, nesting success of pairs with chronically infected males was significantly higher than those with uninfected males (76% vs. 38%), and offspring that had at least one parent that had survived the acute phase of malaria infection had a significantly greater chance of being resighted the following year (25% vs. 10%). The reproduction and survival of infected birds were sufficient for a per-capita population growth rate >1, which suggests that chronically infected Hawaii Amakihi could support a growing population. ?? The American Ornithologists' Union, 2006.

  1. A sea of worms: polychaete checklist of the Adriatic Sea.

    PubMed

    Mikac, Barbara

    2015-01-01

    The checklist of polychaetes of the Adriatic Sea (Mediterranean) based on bibliographic sources published from 1840 to 2014, as well as on novel data, with 49 new records for the area, is herein presented. The Adriatic Sea polychaete fauna comprises at present of 764 species in 360 genera and 62 families. The richest family is the Syllidae, with 112 species (c.a. 15% of the all taxa). Eight families account for as much as 50% of the diversity (Syllidae, Serpulidae, Sabellidae, Phyllodocidae, Spionidae, Polynoidae, Terebellidae and Nereididae). Among the three Adriatic sectors (Northern, Central and Southern Adriatic), the Northern Adriatic is the richest one, whereas the composition of the most diverse families is very similar in all sectors. Data on endemisms (6), aliens (29) and valid species with the type locality in the Adriatic Sea (90) are also discussed. The list of all relevant papers citing each species in the Adriatic is included, allowing future detailed information retrievals for distinct purposes. Results suggest that the number of species will keep increasing in the future, as new surveys will be undertaken, so regular updates of the present list will be necessary. PMID:25947537

  2. Polytraits: A database on biological traits of marine polychaetes

    PubMed Central

    2014-01-01

    Abstract The study of ecosystem functioning – the role which organisms play in an ecosystem – is becoming increasingly important in marine ecological research. The functional structure of a community can be represented by a set of functional traits assigned to behavioural, reproductive and morphological characteristics. The collection of these traits from the literature is however a laborious and time-consuming process, and gaps of knowledge and restricted availability of literature are a common problem. Trait data are not yet readily being shared by research communities, and even if they are, a lack of trait data repositories and standards for data formats leads to the publication of trait information in forms which cannot be processed by computers. This paper describes Polytraits (http://polytraits.lifewatchgreece.eu), a database on biological traits of marine polychaetes (bristle worms, Polychaeta: Annelida). At present, the database contains almost 20,000 records on morphological, behavioural and reproductive characteristics of more than 1,000 marine polychaete species, all referenced by literature sources. All data can be freely accessed through the project website in different ways and formats, both human-readable and machine-readable, and have been submitted to the Encyclopedia of Life for archival and integration with trait information from other sources. PMID:24855436

  3. Polytraits: A database on biological traits of marine polychaetes.

    PubMed

    Faulwetter, Sarah; Markantonatou, Vasiliki; Pavloudi, Christina; Papageorgiou, Nafsika; Keklikoglou, Kleoniki; Chatzinikolaou, Eva; Pafilis, Evangelos; Chatzigeorgiou, Georgios; Vasileiadou, Katerina; Dailianis, Thanos; Fanini, Lucia; Koulouri, Panayota; Arvanitidis, Christos

    2014-01-01

    The study of ecosystem functioning - the role which organisms play in an ecosystem - is becoming increasingly important in marine ecological research. The functional structure of a community can be represented by a set of functional traits assigned to behavioural, reproductive and morphological characteristics. The collection of these traits from the literature is however a laborious and time-consuming process, and gaps of knowledge and restricted availability of literature are a common problem. Trait data are not yet readily being shared by research communities, and even if they are, a lack of trait data repositories and standards for data formats leads to the publication of trait information in forms which cannot be processed by computers. This paper describes Polytraits (http://polytraits.lifewatchgreece.eu), a database on biological traits of marine polychaetes (bristle worms, Polychaeta: Annelida). At present, the database contains almost 20,000 records on morphological, behavioural and reproductive characteristics of more than 1,000 marine polychaete species, all referenced by literature sources. All data can be freely accessed through the project website in different ways and formats, both human-readable and machine-readable, and have been submitted to the Encyclopedia of Life for archival and integration with trait information from other sources. PMID:24855436

  4. Distribution of polychaete assemblage in relation to natural environmental variation and anthropogenic stress

    NASA Astrophysics Data System (ADS)

    Zan, Xiaoxiao; Zhang, Chongliang; Xu, Binduo; Xue, Ying; Ren, Yiping

    2015-08-01

    Polychaete are diverse species of the soft-bottom community, and are often used as indicators in environment monitoring programs. However, the effects of anthropogenic activities and natural environmental variation on polychaete assemblage are rarely addressed. The goals of this study are to identify the effects of natural environmental variation and anthropogenic stress on polychaete assemblage, and to explore the relationship between the polychaete assemblage structure and anthropogenic stress without considering the natural environmental variation. Based on the data collected from the surveys conducted in the tidal flat of Jiaozhou Bay, the relationship between polychaete assemblage structure and environmental variables was determined using multivariate statistical methods including hierarchical cluster analysis, multidimensional scaling (MDS) and canonical correspondence analysis (CCA). The results showed that the polychaete assemblage was dominated by two species, Amphictene japonica and Heteromastus filiformis, and could be divided into two subgroups characterized by high and low species abundance. CCA illustrated that the natural environmental variables including water temperature and the distance from coast had primary effects on the polychaete assemblage structure; while stress of contaminants, such as As and Hg, had the secondary influences; and stress from the aquacultured species, mainly Ruditapes philippinarum, had a limited effect. Colinearity between the natural environmental variables and anthropogenic stress variables caused a critical divergence in the interpretation of CCA results, which highlighted the risk of a lack of information in environment assessment. Glycinde gurjanovae, Sternaspis scutata and Eulalia bilineata may serve as the `contamination indicators', which need to be confirmed in future studies.

  5. Flow variation and substrate type affect dislodgement of the freshwater polychaete, Manayunkia speciosa

    USGS Publications Warehouse

    Malakauskas, David M.; Wilson, Sarah J.; Wilzbach, Margaret A.; Som, Nicholas A.

    2013-01-01

    We quantified microscale flow forces and their ability to entrain the freshwater polychaete, Manayunkia speciosa, the intermediate host for 2 myxozoan parasites (Ceratomyxa shasta and Parvicapsula minibicornis) that cause substantial mortalities in salmonid fishes in the Pacific Northwest. In a laboratory flume, we measured the shear stress associated with 2 mean flow velocities and 3 substrates and quantified associated dislodgement of polychaetes, evaluated survivorship of dislodged polychaetes, and observed behavioral responses of the polychaetes in response to increased flow. We used a generalized linear mixed model to estimate the probability of polychaete dislodgement for treatment combinations of velocity (mean flow velocity  =  55 cm/s with a shear velocity  =  3 cm/s, mean flow velocity  =  140 cm/s with a shear velocity  =  5 cm/s) and substrate type (depositional sediments and analogs of rock faces and the filamentous alga, Cladophora). Few polychaetes were dislodged at shear velocities <3 cm/s on any substrate. Above this level of shear, probability of dislodgement was strongly affected by both substrate type and velocity. After accounting for substrate, odds of dislodgement were 8× greater at the higher flow. After accounting for velocity, probability of dislodgement was greatest from fine sediments, intermediate from rock faces, and negligible from Cladophora. Survivorship of dislodged polychaetes was high. Polychaetes exhibited a variety of behaviors for avoiding increases in flow, including extrusion of mucus, burrowing into sediments, and movement to lower-flow microhabitats. Our findings suggest that polychaete populations probably exhibit high resilience to flow-mediated disturbances.

  6. A paralog of the proteinaceous elicitor SM1 is involved in colonization of maize roots by Trichoderma virens.

    PubMed

    Crutcher, Frankie K; Moran-Diez, Maria E; Ding, Shengli; Liu, Jinggao; Horwitz, Benjamin A; Mukherjee, Prasun K; Kenerley, Charles M

    2015-06-01

    The biocontrol agent, Trichoderma virens, has the ability to protect plants from pathogens by eliciting plant defense responses, involvement in mycoparasitism, or secreting antagonistic secondary metabolites. SM1, an elicitor of induced systemic resistance (ISR), was found to have three paralogs within the T. virens genome. The paralog sm2 is highly expressed in the presence of plant roots. Gene deletion mutants of sm2 were generated and the mutants were found to overproduce SM1. The ability to elicit ISR in maize against Colletotrichum graminicola was not compromised for the mutants compared to that of wild type isolate. However, the deletion strains had a significantly lowered ability to colonize maize roots. This appears to be the first report on the involvement of an effector-like protein in colonization of roots by Trichoderma. PMID:25986544

  7. Effect of different pollutants on ecologically important polychaete worms. Final report

    SciTech Connect

    Reish, D.J.

    1980-06-01

    The procedures for culturing marine polychaetous annelids from egg to egg under laboratory conditions were described. A manual was prepared detailing the procedures used in culturing 12 species of polychaetes. The effects of heavy metals and the water soluble fractions of petroleum hydrocarbons were measured over 96 hours, 28 days, and with some of the toxicants, over a complete reproductive cycle for some of these species of polychaetes. Mercury and copper were the most toxic of the six metals tested and cadmium was the least toxic. The 28-day LC50 was less than the 96-hour value in most experiments.

  8. Isolation and cultivation of xylanolytic and cellulolytic Sarocladium kiliense and Trichoderma virens from the gut of the termite Reticulitermes santonensis.

    PubMed

    Tarayre, Cédric; Bauwens, Julien; Brasseur, Catherine; Mattéotti, Christel; Millet, Catherine; Guiot, Pierre Alexandre; Destain, Jacqueline; Vandenbol, Micheline; Portetelle, Daniel; De Pauw, Edwin; Haubruge, Eric; Francis, Frédéric; Thonart, Philippe

    2015-03-01

    The purpose of this work was the isolation and cultivation of cellulolytic and xylanolytic microorganisms extracted from the gut of the lower termite Reticulitermes santonensis. Microcrystalline cellulose (with and without lignin) and beech wood xylan were used as diets instead of poplar wood in order to select cellulose and hemicellulose-degrading fungi. The strain Sarocladium kiliense (Acremonium kiliense) CTGxxyl was isolated from the termites fed on xylan, while the strain Trichoderma virens CTGxAviL was isolated from the termites fed on cellulose (with and without lignin). Both molds were cultivated in liquid media containing different substrates: agro-residues or purified polymers. S. kiliense produced maximal β-glucosidase, endo-1,4-β-D-glucanase, exo-1,4-β-D-glucanase and endo-1,4-β-D-xylanase activities of 0.103, 3.99, 0.53, and 40.8 IU/ml, respectively. T. virens produced maximal β-xylosidase, endo-1,4-β-D-glucanase, exo-1,4-β-D-glucanase, and endo-1,4-β-D-xylanase activities of 0.38, 1.48, 0.69, and 426 IU/ml. The cellulase and the xylanase of S. kiliense, less common than T. virens, were further investigated. The optimal activity of the xylanase was observed at pH 9-10 at 60 °C. The cellulase showed its maximal activity at pH 10, 70 °C. Zymography identified different xylanases produced by both molds, and some fragment sizes were highlighted: 35, 100, and 170 kDa for S. kiliense and 20, 40, 80, and 170 kDa for T. virens. In both cases, endo-1,4-β-D-xylanase activities were confirmed through mass spectrometry. PMID:25300185

  9. Mitochondrial genome of the polychaete Tylorrhynchus heterochaetus (Phyllodocida, Nereididae).

    PubMed

    Chen, Xinghan; Li, Mingming; Liu, Heping; Li, Bo; Guo, Liang; Meng, Zining; Lin, Haoran

    2016-09-01

    We firstly reported the complete mitochondrial genome (mitogenome) of the polychaete Tylorrhynchus heterochaetus. Illumina next-generation sequencing generated a total of 19,796 reads with an average depth of 122.91×. The mitogenome is 16,106 bp in length including the typical structure of 13 protein coding genes, two rRNA genes, 22 tRNA genes and a putative control region. However, T. heterochaetus differs from other Nereididae species in the positions of four genes (tRNA-Met, tRNA-Asp, ATP8, tRNA-Tyr). All 37 genes are encoded on the heavy strand whose nucleotide composition is 32.20 % A, 13.67% C, 21.33% G and 32.80% T. PMID:25714146

  10. Homeogenetic inductive mechanism of segmentation in polychaete tail regeneration.

    PubMed

    Niwa, Nao; Akimoto-Kato, Ai; Sakuma, Masashi; Kuraku, Shigehiro; Hayashi, Shigeo

    2013-09-15

    Segmentation is a body-patterning strategy in which new segments are specified from a segment-addition zone containing uncommitted cells. However, the cell-recruitment process is poorly understood. Here we investigated in detail the segmentation in a polychaete annelid, Perinereis nuntia (Lophotrochozoa), in which new segments emerge at the boundary between the posterior end of the segmented region and the terminal pygidium. Cells at this border synchronously remodel their chromatin, enter the cell cycle, and undergo oriented cell division, before being added to new segments. wingless is expressed at the posterior edge of the pre-existing segment, abutted by hedgehog in the first row of the new segment. Overstimulation of Wingless signaling caused excess cells to enter the cell cycle, prolonging segmentation and widening the new segment. Thus, segment addition may occur by a homeogenetic mechanism, in which Wingless expressed in the differentiated segment coordinates the stepwise recruitment of undifferentiated cells from the segment/pygidium boundary. PMID:23608458

  11. Diet of Worms Emended: An Update of Polychaete Feeding Guilds

    NASA Astrophysics Data System (ADS)

    Jumars, Peter A.; Dorgan, Kelly M.; Lindsay, Sara M.

    2015-01-01

    Polychaetes are common in most marine habitats and dominate many infaunal communities. Functional guild classification based on taxonomic identity and morphology has linked community structure to ecological function. The functional guilds now include osmotrophic siboglinids as well as sipunculans, echiurans, and myzostomes, which molecular genetic analyses have placed within Annelida. Advances in understanding of encounter mechanisms explicitly relate motility to feeding mode. New analyses of burrowing mechanics explain the prevalence of bilateral symmetry and blur the boundary between surface and subsurface feeding. The dichotomy between microphagous deposit and suspension feeders and macrophagous carnivores, herbivores, and omnivores is further supported by divergent digestive strategies. Deposit feeding appears to be limited largely to worms longer than 1 cm, with juveniles and small worms in general restricted to ingesting highly digestible organic material and larger, rich food items, blurring the macrophage-microphage dichotomy that applies well to larger worms.

  12. Diet of worms emended: an update of polychaete feeding guilds.

    PubMed

    Jumars, Peter A; Dorgan, Kelly M; Lindsay, Sara M

    2015-01-01

    Polychaetes are common in most marine habitats and dominate many infaunal communities. Functional guild classification based on taxonomic identity and morphology has linked community structure to ecological function. The functional guilds now include osmotrophic siboglinids as well as sipunculans, echiurans, and myzostomes, which molecular genetic analyses have placed within Annelida. Advances in understanding of encounter mechanisms explicitly relate motility to feeding mode. New analyses of burrowing mechanics explain the prevalence of bilateral symmetry and blur the boundary between surface and subsurface feeding. The dichotomy between microphagous deposit and suspension feeders and macrophagous carnivores, herbivores, and omnivores is further supported by divergent digestive strategies. Deposit feeding appears to be limited largely to worms longer than 1 cm, with juveniles and small worms in general restricted to ingesting highly digestible organic material and larger, rich food items, blurring the macrophage-microphage dichotomy that applies well to larger worms. PMID:25251269

  13. Polychaete assemblage as surrogate for prey availability in assessing southeastern Bering Sea flatfish habitat

    NASA Astrophysics Data System (ADS)

    Yeung, Cynthia; Yang, Mei-Sun; Jewett, Stephen C.; Naidu, A. S.

    2013-02-01

    The flatfish yellowfin sole (Limanda aspera), northern rock sole (Lepidopsetta polyxystra), and Alaska plaice (Pleuronectes quadrituberculatus) in the southeastern Bering Sea prey mainly on infauna. Spatial correspondence between their stomach contents and infauna assemblages across habitat types was examined to identify indices of prey availability for flatfish habitat characterization and quality assessment. Benthic samples and flatfish stomachs were collected in 2009 near the Alaska Peninsula in the southeastern Bering Sea. Polychaetes and bivalves were the most dominant infauna groups, each comprising 35-60% by weight in each infauna sample. These two were also the only prey groups that frequently averaged > 50% of stomach content by weight. Bivalves dominated the infauna biomass on the relatively sandy inner shelf (0-50 m depth). The muddier middle shelf (50-100 m) had the highest infauna biomass, which was dominated by polychaetes. Diet compositions of the flatfish varied spatially in correspondence with the infauna assemblage. Polychaetes were prevalent in all flatfish diets on the middle shelf, even yellowfin sole whose typical primary prey are amphipods and bivalves. Polychaete-rich habitats are potentially prime for flatfish as polychaetes are readily utilized where available and generally have high nutritional value. Flatfish did not select for specific polychaete taxa, so an index of habitat quality could be based on the biomass of aggregate polychaetes or on dominant polychaete families of the region. Under normal environmental conditions, the three flatfish have slightly-offset spatial distributions, enabling each to utilize different infauna assemblages across the shelf. However, during cold phases in the Bering Sea ecosystem, as when this study was conducted, a cold pool of < 2 °C bottom water from the spring ice melt extends over the middle shelf in summer. This physiological barrier displaces all three flatfish to the inner shelf, intensifying

  14. Polychaete assemblages and sediment pollution in a harbour with two opposing entrances

    NASA Astrophysics Data System (ADS)

    Guerra-García, José M.; García-Gómez, José C.

    2004-10-01

    The harbour at Ceuta is one of the most important harbours in the Strait of Gibraltar. The sediments are moderately polluted with organic matter and heavy metals but the harbour has two opposing entrances and a connecting channel which increases water renewal and dissolved oxygen across the harbour. For these special conditions, the value of the soft bottom polychaete community as a bioindicator, and possible advantages of the presence of two harbour entrances on biotic assemblages, were studied. Twenty-one stations were selected, and 27 variables were measured in the sediment of each station. The polychaete species richness and Shannon diversity values were similar inside and outside the harbour. Nevertheless, the Pielou evenness index was significantly higher in the external stations due to high densities of some species of polychaetes such as Pseudomalacoceros tridentata and Capitella capitata inside the harbour. The multivariate approach based on polychaete species composition was much more sensitive than univariate analyses at discriminating between internal and external stations. The pollution gradient and granulometric parameters were the main factors affecting polychaete distribution. Polychaete species richness and diversity in sediments inside Ceuta harbour were higher than in conventional harbours due to the positive effects of increased water renewal. These results should be taken into consideration in design, construction and remodelling of future harbours.

  15. Impacts of the 2011 tsunami on the subtidal polychaete assemblage and the following recolonization in Onagawa Bay, northeastern Japan.

    PubMed

    Abe, Hirokazu; Kobayashi, Genki; Sato-Okoshi, Waka

    2015-12-01

    The ecological impacts of the 2011 Great East Japan Earthquake and tsunami and the following recolonization of the subtidal benthic polychaete community were examined by monthly pre- and post-quake field surveys that were conducted in Onagawa Bay from 2007 to 2013. Before the tsunami, the species composition in this benthic community was constant and was dominated by cirratulid and magelonid polychaetes. The density and biomass of benthic polychaetes drastically decreased after the tsunami, and the polychaete community fluctuated during the 2 years after the natural disaster. Spionid and capitellid polychaetes were dominant at this period. In June 2013, the community entered a new constant stage dominated by maldanids, which is different from the pre-quake community. Ecological impacts due to chemical pollution were suggested in addition to the tsunami disturbance. These overlapping effects and physical, chemical and biological factors affected the recovery and recolonization of the polychaete community after the natural disaster. PMID:26454517

  16. Characteristics of freeze-dried fish protein isolated from saithe (Pollachius virens).

    PubMed

    Shaviklo, Gholam Reza; Thorkelsson, Gudjon; Arason, Sigurjon; Sveinsdottir, Kolbrun

    2012-06-01

    Fish proteins isolated from by-products or low commercial/underutilized species using pH-shift process is a new source of proteins that may be used as wet or dried ingredients to develop value-added convenience foods. This paper reports the effects of freeze-drying on characteristics of fish protein isolates (FPI) from saithe (Pollachius virens) with or without lyoprotectants. Freeze-dried saithe mince from the same lot and without additives was used as a control. The resulting fish protein powders contained 71-93% protein, 1.5-3% moisture, 0-21% carbohydrate and 0.5-2% fat. Lipid oxidation (assessed by TBARS) of FPI powder groups was higher than that of fish mince powder. The results revealed that oxidation started during the pH-shift process and was increased by freeze-drying. Functional properties and sensory attributes were influenced by the advanced oxidation. However, the mince powder was less oxidized and had higher functional properties such as water binding capacity, gel forming ability, emulsification, foaming properties and colour and lower sensory scores for rancid odour and flavour than the FPI powders. Further studies on how to prevent oxidation of fish flesh during pH-shift and drying processes are recommended. PMID:23729850

  17. Isolation and characterization of a novel lectin from the mushroom Armillaria luteo-virens

    SciTech Connect

    Feng, K.; Liu, Q.H.; Ng, T.B.; Liu, H.Z.; Li, J.Q.; Chen, G.; Sheng, H.Y.; Xie, Z.L.; Wang, H.X. . E-mail: hxwang@cau.edu.cn

    2006-07-14

    From the dried fruiting bodies of the mushroom Armillaria luteo-virens, a dimeric lectin with a molecular mass of 29.4 kDa has been isolated. The purification procedure involved (NH{sub 4}){sub 2}SO{sub 4} precipitation, ion exchange chromatography on DEAE-cellulose, CM-cellulose, and Q-Sepharose, and gel filtration by fast protein liquid chromatography on Superdex 75. The hemagglutinating activity of the lectin could not be inhibited by simple sugars but was inhibited by the polysaccharide inulin. The activity was stable up to 70 {sup o}C but was acid- and alkali-labile. Salts including FeCl{sub 3}, AlCl{sub 3}, and ZnCl{sub 2} inhibited the activity whereas MgCl{sub 2}, MnCl{sub 2}, and CaCl{sub 2} did not. The lectin stimulated mitogenic response of mouse splenocytes with the maximal response achieved by 1 {mu}M lectin. Proliferation of tumor cells including MBL2 cells, HeLa cells, and L1210 cells was inhibited by the lectin with an IC{sub 5} of 2.5, 5, and 10 {mu}M, respectively. However, proliferation of HepG2 cells was not affected. The novel aspects of the isolated lectin include a novel N-terminal sequence, fair thermostability, acid stability, and alkali stability, together with potent mitogenic activity toward spleen cells and antiproliferative activity toward tumor cells.

  18. Regulation of morphogenesis and biocontrol properties in Trichoderma virens by a VELVET protein, Vel1.

    PubMed

    Mukherjee, Prasun K; Kenerley, Charles M

    2010-04-01

    Mycoparasitic strains of Trichoderma are applied as commercial biofungicides for control of soilborne plant pathogens. Although the majority of commercial biofungicides are Trichoderma based, chemical pesticides, which are ecological and environmental hazards, still dominate the market. This is because biofungicides are not as effective or consistent as chemical fungicides. Efforts to improve these products have been limited by a lack of understanding of the genetic regulation of biocontrol activities. In this study, using gene knockout and complementation, we identified the VELVET protein Vel1 as a key regulator of biocontrol, as well as morphogenetic traits, in Trichoderma virens, a commercial biocontrol agent. Mutants with mutations in vel1 were defective in secondary metabolism (antibiosis), mycoparasitism, and biocontrol efficacy. In nutrient-rich media they also lacked two types of spores important for survival and development of formulation products: conidia (on agar) and chlamydospores (in liquid shake cultures). These findings provide an opportunity for genetic enhancement of biocontrol and industrial strains of Trichoderma, since Vel1 is very highly conserved across three Trichoderma species. PMID:20154111

  19. Condensed Tannins from Ficus virens as Tyrosinase Inhibitors: Structure, Inhibitory Activity and Molecular Mechanism

    PubMed Central

    Chai, Wei-Ming; Feng, Hui-Ling; Zhuang, Jiang-Xing; Chen, Qing-Xi

    2014-01-01

    Condensed tannins from Ficus virens leaves, fruit, and stem bark were isolated and their structures characterized by 13C nuclear magnetic resonance spectrometry, high performance liquid chromatography electrospray ionization mass spectrometry, and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. The results showed that the leaves, fruit, and stem bark condensed tannins were complex mixtures of homo- and heteropolymers of B-type procyanidins and prodelphinidins with degrees of polymerization up to hexamer, dodecamer, and pentadecamer, respectively. Antityrosinase activities of the condensed tannins were studied. The results indicated that the condensed tannins were potent tyrosinase inhibitors. The concentrations for the leaves, fruit, and stem bark condensed tannins leading to 50% enzyme activity were determined to be 131.67, 99.89, and 106.22 μg/ml on monophenolase activity, and 128.42, 43.07, and 74.27 μg/ml on diphenolase activity. The inhibition mechanism, type, and constants of the condensed tannins on the diphenolase activity were further investigated. The results indicated that the condensed tannins were reversible and mixed type inhibitors. Fluorescence quenching, copper interacting, and molecular docking techniques were utilized to unravel the molecular mechanisms of the inhibition. The results showed that the hydroxyl group on the B ring of the condensed tannins could chelate the dicopper irons of the enzyme. Moreover, the condensed tannins could reduce the enzyme product o-quinones into colourless compounds. These results would contribute to the development and design of antityrosinase agents. PMID:24637701

  20. Genetic diversity analysis reveals that geographical environment plays a more important role than rice cultivar in Villosiclava virens population selection.

    PubMed

    Wang, Fei; Zhang, Shu; Liu, Mei-Gang; Lin, Xian-Song; Liu, Hui-Jiang; Peng, You-Liang; Lin, Yang; Huang, Jun-Bin; Luo, Chao-Xi

    2014-05-01

    Rice false smut caused by Villosiclava virens is an economically important disease of grains worldwide. The genetic diversity of 153 isolates from six fields located in Wuhan (WH), Yichang Wangjia (YCW), Yichang Yaohe (YCY), Huanggang (HG), Yangxin (YX), and Jingzhou (JZ) in Hubei province of China were phylogenetically analyzed to evaluate the influence of environments and rice cultivars on the V. virens populations. Isolates (43) from Wuhan were from two rice cultivars, Wanxian 98 and Huajing 952, while most of the other isolates from fields YCW, YCY, HG, YX, and JZ originated from different rice cultivars with different genetic backgrounds. Genetic diversity of isolates was analyzed using random amplified polymorphic DNA (RAPD) and single-nucleotide polymorphisms (SNP). The isolates from the same cultivars in Wuhan tended to group together, indicating that the cultivars had an important impact on the fungal population. The 110 isolates from individual fields tended to cluster according to geographical origin. The values of Nei's gene diversity (H) and Shannon's information index (I) showed that the genetic diversity among isolates was higher between than within geographical populations. Furthermore, mean genetic distance between groups (0.006) was higher than mean genetic distance within groups (0.0048) according to MEGA 5.2. The pairwise population fixation index (FST) values also showed significant genetic differentiation between most populations. Higher genetic similarity of isolates from individual fields but different rice cultivars suggested that the geographical factor played a more important role in the selection of V. virens isolates than rice cultivars. This information could be used to improve the management strategy for rice false smut by adjusting the cultivation measures, such as controlling fertilizer, water, and planting density, in the rice field to change the microenvironment. PMID:24584249

  1. Genetic Diversity Analysis Reveals that Geographical Environment Plays a More Important Role than Rice Cultivar in Villosiclava virens Population Selection

    PubMed Central

    Wang, Fei; Zhang, Shu; Liu, Mei-Gang; Lin, Xian-Song; Liu, Hui-Jiang; Peng, You-Liang; Lin, Yang; Huang, Jun-Bin

    2014-01-01

    Rice false smut caused by Villosiclava virens is an economically important disease of grains worldwide. The genetic diversity of 153 isolates from six fields located in Wuhan (WH), Yichang Wangjia (YCW), Yichang Yaohe (YCY), Huanggang (HG), Yangxin (YX), and Jingzhou (JZ) in Hubei province of China were phylogenetically analyzed to evaluate the influence of environments and rice cultivars on the V. virens populations. Isolates (43) from Wuhan were from two rice cultivars, Wanxian 98 and Huajing 952, while most of the other isolates from fields YCW, YCY, HG, YX, and JZ originated from different rice cultivars with different genetic backgrounds. Genetic diversity of isolates was analyzed using random amplified polymorphic DNA (RAPD) and single-nucleotide polymorphisms (SNP). The isolates from the same cultivars in Wuhan tended to group together, indicating that the cultivars had an important impact on the fungal population. The 110 isolates from individual fields tended to cluster according to geographical origin. The values of Nei's gene diversity (H) and Shannon's information index (I) showed that the genetic diversity among isolates was higher between than within geographical populations. Furthermore, mean genetic distance between groups (0.006) was higher than mean genetic distance within groups (0.0048) according to MEGA 5.2. The pairwise population fixation index (FST) values also showed significant genetic differentiation between most populations. Higher genetic similarity of isolates from individual fields but different rice cultivars suggested that the geographical factor played a more important role in the selection of V. virens isolates than rice cultivars. This information could be used to improve the management strategy for rice false smut by adjusting the cultivation measures, such as controlling fertilizer, water, and planting density, in the rice field to change the microenvironment. PMID:24584249

  2. Benthic polychaetes in the Ratnagiri bay, India: influence of anthropogenic factors.

    PubMed

    Sukumaran, Soniya; Bhokepode, Kanchan; Telavane, Madhavi; Kubal, Priti; Gajbhiye, S N

    2011-11-01

    Study of changes in macrobenthic community structure is an intrinsic part of many environmental monitoring programmes. Hence, it is pivotal to distinguish the effects of natural and anthropogenic factors on these sensitive organisms for accurate assessment and management of coastal environment. Polychaete species diversity of five stations in the Ratnagiri bay was investigated during premonsoon and postmonsoon months in 2007. Though no spatial trends in polychaete diversity vis-à-vis the pollution was visible, the polychaete univariate indices were uniformily better in premonsoon indicating clear seasonal trends. Shannon diversity values ranged from 1.4-2.4 during premonsoon and 0.6-1.6 during postmonsoon. Station 5, which was most impacted by anthropogenic wastes as demonstrated by the anoxic conditions coupled with higher nutrient load, had comparatively higher H' values (1.9 and 1.6) and better evenness values (0.9 and 0.7) during both seasons indicating that the polychaetes were not influenced by anthropogenic contamination. The study indicates that the polychaete distribution and diversity in the bay were governed primarily by variations in sediment texture rather than the anthropogenic disturbances. PMID:22471207

  3. Polychaete abundance, biomass and diversity patterns at the Mid-Atlantic Ridge, North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Shields, Mark A.; Blanco-Perez, Raimundo

    2013-12-01

    Recent studies have revealed that the Mid-Atlantic Ridge (MAR) in the North Atlantic Ocean accounts for a large proportion of available bathyal soft-sediment habitat. When comparing the MAR to the continental margins of the North Atlantic, it is apparent that very little is known about the soft-sediment macrofaunal community associated with the MAR. In the present study, as part of the ECOMAR (Ecosystems of the Mid-Atlantic Ridge at the Sub-Polar Front and Charlie-Gibbs Fracture Zone) project, the polychaete component of the MAR macrofaunal community was investigated. A total of 751 polychaete specimens and 133 species were identified from megacorer samples collected at four MAR sites (48-54°N, depth: 2500-2800 m) sampled during the RRS James Cook 48 cruise in the summer of 2010. Polychaetes were the most abundant member of the macrofaunal community, and there was no significant difference in polychaete abundance, biomass and diversity between any of the MAR sites. In addition, the MAR did not appear to provide a physical barrier to the distribution of bathyal polychaetes either side of the ridge.

  4. A new substance to relax polychaete worms (Annelida) prior to morphological study

    PubMed Central

    Bonyadi-Naeini, Alieh; Rahimian, Hassan; Glasby, Christopher J.

    2016-01-01

    Abstract A variety of chemical substances have been used to relax and/or immobilize polychaete worms, and other invertebrates, prior to specimen preparation for morphological examination. To solve difficulties encountered during the study of nereidid polychaetes (Annelida: Phyllodocida), an experiment was designed and carried out to investigate a new relaxing agent to immobilize nereidid specimens and stimulate pharynx eversion. The new substance, Dentol® (Khoraman laboratory, Iran), a dental anesthetic and antiseptic medicine containing 10% Carvacrol as the effective ingredient, was used for the first time and compared with other substances that have been used traditionally in polychaete studies. Crosstab analysis showed significant differences between different treatment groups, with Dentol® providing much better results for all considered criteria. PMID:27408556

  5. A new substance to relax polychaete worms (Annelida) prior to morphological study.

    PubMed

    Bonyadi-Naeini, Alieh; Rahimian, Hassan; Glasby, Christopher J

    2016-01-01

    A variety of chemical substances have been used to relax and/or immobilize polychaete worms, and other invertebrates, prior to specimen preparation for morphological examination. To solve difficulties encountered during the study of nereidid polychaetes (Annelida: Phyllodocida), an experiment was designed and carried out to investigate a new relaxing agent to immobilize nereidid specimens and stimulate pharynx eversion. The new substance, Dentol® (Khoraman laboratory, Iran), a dental anesthetic and antiseptic medicine containing 10% Carvacrol as the effective ingredient, was used for the first time and compared with other substances that have been used traditionally in polychaete studies. Crosstab analysis showed significant differences between different treatment groups, with Dentol® providing much better results for all considered criteria. PMID:27408556

  6. An in vitro and molecular informatics study to evaluate the antioxidative and β-hydroxy-β-methylglutaryl-CoA reductase inhibitory property of Ficus virens Ait.

    PubMed

    Iqbal, Danish; Khan, M Salman; Khan, Mohd S; Ahmad, Saheem; Srivastava, Ashwini K

    2014-06-01

    The present study is initially intended to evaluate antioxidant and β-hydroxy-β-methylglutaryl-CoA reductase (HMGR) inhibitory property of Ficus virens Ait., first by in vitro analyses followed by a corroboratory molecular informatics study. Our results show that of all the sequentially extracted fraction of F. virens bark and leaves extract, F. virens bark methanol extract exhibits strong radical scavenging, antioxidant and oxidative DNA damage protective activity, which is well correlated with its total phenolic content. In addition, F. virens bark methanol extract, which is non-cytotoxic, significantly and non-covalently inhibit the HMGR activity (IC50  = 3.45 ± 0.45 µg/ml) in comparison with other extracts. The mechanistic aspect of this inhibition activity is authenticated by molecular docking study of bioactive compounds as revealed from gas chromatography-mass spectrometry data, with HMGR. The analysis for the first time indicates that quinic acid (ΔG: -8.11 kcal/mol) and paravastatin (ΔG: -8.22 kcal/mol) exhibit almost same binding energy, while other compounds also showed good binding energy, suggesting that quinic acid alone or in combination with other major bioactive compound is probably responsible for HMGR inhibitory property of the extract and plausibly can be used in in vivo system for the management, prevention, and alleviation of hypercholesterolemia as well as hypercholesterolemia-induced oxidative stress. PMID:24151056

  7. Larval ontogenetic stages of Chaetopterus: developmental heterochrony in the evolution of chaetopterid polychaetes.

    PubMed

    Irvine, S Q; Chaga, O; Martindale, M Q

    1999-12-01

    Seven post-gastrulation larval stages are described for the sedentary polychaete Chaetopterus. Analysis of larval anatomy and morphology through ontogeny reveals significant differences in the temporal sequence of segmentation, and in the character of segments formed, from the typical embryological pattern described for other polychaete families, such as nereidids or spionids. When compared in alternative phylogenetic schemes, these differences represent significant developmental heterochrony, among other evolutionary transitions, which has arisen in the chaetopterid lineage. The heterochrony is correlated with the extreme morphological regionalization along the anterior-posterior body axis, a feature that is also characteristic of chaetopterids. PMID:10630333

  8. Molecular phylogenetic evidence of a haplosporidian parasite infecting the polychaete Syllis nipponica (Imajima, 1966).

    PubMed

    Siddall, Mark E; Aguado, M-Teresa

    2006-08-01

    A haplosporidian parasite was detected in the polychaete Syllis nipponica via the amplification and sequencing of the 18S rDNA locus. This provides additional evidence of haplosporidians in polychaetes, the host group from which the first species of the phylum were described about a century ago. In phylogenetic analyses, the parasite was determined to place among mollusk-specific taxa. As such, separate taxonomic groups for haplosporidians infecting different host phyla should not be anticipated. These findings also underscore the as-yet unknown life cycles of commercially important parasites. Attempts to visualize spores of the parasite directly with scanning electron microscopy did not succeed. PMID:16721602

  9. First documentation and molecular confirmation of three trematode species (Platyhelminthes: Trematoda) infecting the polychaete Marenzelleria viridis (Annelida: Spionidae).

    PubMed

    Phelan, Krystin; Blakeslee, April M H; Krause, Maureen; Williams, Jason D

    2016-01-01

    Polychaete worms are hosts to a wide range of marine parasites; yet, studies on trematodes using these ecologically important species as intermediate hosts are lacking. During examination of the spionid polychaete Marenzelleria viridis collected on the north shore of Long Island, New York, putative trematode cysts were discovered in the body cavity of these polychaetes. In order to verify these cysts as metacercariae of trematodes, specimens of the eastern mudsnail Ilyanassa obsoleta (a very common first intermediate host of trematodes in the region) were collected for molecular comparison. DNA barcoding using cytochrome C oxidase I regions confirmed the presence of three species of trematodes (Himasthla quissetensis, Lepocreadium setiferoides, and Zoogonus lasius) in both M. viridis and I. obsoleta hosts. Brown bodies were also recovered from polychaetes, and molecular testing confirmed the presence of L. setiferoides and Z. lasius, indicating an immune response of the polychaete leading to encapsulation of the cysts. From the 125 specimens of M. viridis collected in 2014, 95 (76.8 %) were infected with trematodes; of these 95 infected polychaetes, 86 (90.5 %) contained brown bodies. This is the first confirmation that trematodes use M. viridis as a second intermediate host and that this intermediate host demonstrates a clear immune response to metacercarial infection. Future research should explore the role of these polychaetes in trematode life cycles, the effectiveness of the immune response, and transmission pathways to vertebrate definitive hosts. PMID:26385466

  10. Influence of salinity and temperature on the activity of biosurfactants by polychaete-associated isolates.

    PubMed

    Rizzo, Carmen; Michaud, Luigi; Syldatk, Christoph; Hausmann, Rudolf; De Domenico, Emilio; Lo Giudice, Angelina

    2014-02-01

    Influence of different parameters on biosurfactant (BS) activity was carried out on strains that were isolated from the polychaetes Megalomma claparedei, Sabella spallanzanii and Branchiomma luctuosum and additional 30 strains that were previously identified as potential BS producers from crude oil enrichments of the same polychaete specimens. The selection of BS-producing strains from polychaete natural samples was carried out by using standard screening tests. The BS activity by each isolate was evaluated for the effect of salinity and temperature on emulsion production and surface tension reduction, during incubation in mineral medium supplemented with tetradecane or diesel oil. All isolates showed a similar time course of BS activity, and the latter was more influenced by salinity rather than temperature. Some of the BS producers belonged to genera that have not (i.e. Citricoccus, Cellulophaga, Tenacibaculum and Maribacter) or have poorly been (Psychrobacter, Vibrio, and Pseudoalteromonas) reported as able to produce BSs. This is remarkable as some of them have previously been detected in hydrocarbon-enriched samples. Results confirm that filter-feeding polychaetes are an efficient source for the isolation of BS producers. PMID:24170506

  11. Lower Cambrian polychaete from China sheds light on early annelid evolution.

    PubMed

    Liu, Jianni; Ou, Qiang; Han, Jian; Li, Jinshu; Wu, Yichen; Jiao, Guoxiang; He, Tongjiang

    2015-06-01

    We herein report a fossilized polychaete annelid, Guanshanchaeta felicia gen. et sp. nov., from the Lower Cambrian Guanshan Biota (Cambrian Series 2, stage 4). The new taxon has a generalized polychaete morphology, with biramous parapodia (most of which preserve the evidence of chaetae), an inferred prostomium bearing a pair of appendages, and a bifid pygidium. G. felicia is the first unequivocal annelid reported from the Lower Cambrian of China. It represents one of the oldest annelids among those from other early Paleozoic Lagerstätten including Sirius Passet from Greenland (Vinther et al., Nature 451: 185-188, 2011) and Emu Bay from Kangaroo island (Parry et al., Palaeontology 57: 1091-1103, 2014), and adds to our increasing roll of present-day animal phyla recognized in the early Cambrian Guanshan Biota. This finding expands the panorama of the Cambrian 'explosion' exemplified by the Guanshan Biota, suggesting the presence of many more fossil annelids in the Chengjiang Lagerstätte and the Kaili Biota. In addition, this new taxon increases our knowledge of early polychaete morphology, which suggests that polychaete annelids considerably diversified in the Cambrian. PMID:26017277

  12. Spatial Relationships between Polychaete Assemblages and Environmental Variables over Broad Geographical Scales

    PubMed Central

    Benedetti-Cecchi, Lisandro; Iken, Katrin; Konar, Brenda; Cruz-Motta, Juan; Knowlton, Ann; Pohle, Gerhard; Castelli, Alberto; Tamburello, Laura; Mead, Angela; Trott, Tom; Miloslavich, Patricia; Wong, Melisa; Shirayama, Yoshihisa; Lardicci, Claudio; Palomo, Gabriela; Maggi, Elena

    2010-01-01

    This study examined spatial relationships between rocky shore polychaete assemblages and environmental variables over broad geographical scales, using a database compiled within the Census of Marine Life NaGISA (Natural Geography In Shore Areas) research program. The database consisted of abundance measures of polychaetes classified at the genus and family levels for 74 and 93 sites, respectively, from nine geographic regions. We tested the general hypothesis that the set of environmental variables emerging as potentially important drivers of variation in polychaete assemblages depend on the spatial scale considered. Through Moran's eigenvector maps we indentified three submodels reflecting spatial relationships among sampling sites at intercontinental (>10000 km), continental (1000–5000 km) and regional (20–500 km) scales. Using redundancy analysis we found that most environmental variables contributed to explain a large and significant proportion of variation of the intercontinental submodel both for genera and families (54% and 53%, respectively). A subset of these variables, organic pollution, inorganic pollution, primary productivity and nutrient contamination was also significantly related to spatial variation at the continental scale, explaining 25% and 32% of the variance at the genus and family levels, respectively. These variables should therefore be preferably considered when forecasting large-scale spatial patterns of polychaete assemblages in relation to ongoing or predicted changes in environmental conditions. None of the variables considered in this study were significantly related to the regional submodel. PMID:20886075

  13. Lower Cambrian polychaete from China sheds light on early annelid evolution

    NASA Astrophysics Data System (ADS)

    Liu, Jianni; Ou, Qiang; Han, Jian; Li, Jinshu; Wu, Yichen; Jiao, Guoxiang; He, Tongjiang

    2015-06-01

    We herein report a fossilized polychaete annelid, Guanshanchaeta felicia gen. et sp. nov., from the Lower Cambrian Guanshan Biota (Cambrian Series 2, stage 4). The new taxon has a generalized polychaete morphology, with biramous parapodia (most of which preserve the evidence of chaetae), an inferred prostomium bearing a pair of appendages, and a bifid pygidium. G. felicia is the first unequivocal annelid reported from the Lower Cambrian of China. It represents one of the oldest annelids among those from other early Paleozoic Lagerstätten including Sirius Passet from Greenland (Vinther et al., Nature 451: 185-188, 2008) and Emu Bay from Kangaroo island (Parry et al., Palaeontology 57: 1091-1103, 2014), and adds to our increasing roll of present-day animal phyla recognized in the early Cambrian Guanshan Biota. This finding expands the panorama of the Cambrian `explosion' exemplified by the Guanshan Biota, suggesting the presence of many more fossil annelids in the Chengjiang Lagerstätte and the Kaili Biota. In addition, this new taxon increases our knowledge of early polychaete morphology, which suggests that polychaete annelids considerably diversified in the Cambrian.

  14. Eranno carrerai sp. nov., a new polychaete worm (Lumbrineridae) from coastal waters of China

    NASA Astrophysics Data System (ADS)

    Cai, Wenqian; Li, Xinzheng

    2011-01-01

    In this paper, a new polychaete species, Eranno carrerai sp. nov. from coastal areas of China, is described based on specimens deposited in the Marine Biological Museum of the Chinese Academy of Sciences, Qingdao, collected during 1957 to 1976 from the Yellow Sea, East China Sea and South China Sea at depths of 9-210 m.

  15. Biological characterisation of Sarcocystis neurona isolated from a Southern sea otter (Enhydra lutris nereis)

    USGS Publications Warehouse

    Lindsay, D.S.; Thomas, N.J.; Dubey, J.P.

    2000-01-01

    Sarcocystis neurona was isolated from the brain of a juvenile, male southern sea otter (Enhydra lutris nereis) suffering from CNS disease. Schizonts and merozoites in tissue sections of the otter's brain reacted with anti-S. neurona antiserum immunohistochemically. Development in cell culture was by endopolyogeny and mature schizonts were first observed at 3 days postinoculation. PCR of merozoite DNA using primer pairs JNB33/JNB54 and restriction enzyme digestion of the 1100 bp product with Dra I indicated the organism was S. neurona. Four of four interferon-γ gene knockout mice inoculated with merozoites developed S. neurona-associated encephalitis. Antibodies to S. neurona but not Sarcocystis falcatula, Toxoplasma gondii, or Neospora caninum were present in the serum of inoculated mice. This is the first isolation of S. neurona from the brain of a non-equine host.

  16. Nereis diversicolor and copper contamination effect on the erosion of cohesive sediments: A flume experiment

    NASA Astrophysics Data System (ADS)

    Fernandes, S.; Sobral, P.; Alcântara, F.

    2009-04-01

    The effect of bioturbation on the erodability of natural and manipulated copper spiked sediments (3 μmol Cu g -1 dw) was investigated using sediments collected in the Tagus estuary and Nereis diversicolor (900 ind m -2). The input of particulate matter and Cu into the water column as a result of erosion was quantified in an annular flume at 7 shear velocities (1-13 cm s -1). The biogeochemical characteristics of the sediment were analysed in depth down to 8 cm. Cu contamination elicited lower levels of eroded matter and lower shear strength profiles. Eroded matter and sediment shear strength values were higher (up to 1.7 kg m -2) in the presence of N. diversicolor, whose effect was less pronounced under contamination. Sediment erodability was not only related to hydrodynamics but was highly affected by the biogeochemical characteristics and contamination of the sediments.

  17. Modified-closed castration: a novel technique for sea otter (Enhydra lutris nereis) orchiectomies.

    PubMed

    McDermott, Alexa J; Clauss, Tonya; Sakals, Sherisse; Mejia, Johanna; Radlinsky, MaryAnn G

    2013-09-01

    A novel surgical technique was used in the routine castrations of two intact male southern sea otters, Enhydra lutris nereis, housed at the Georgia Aquarium (Atlanta, Georgia, USA). This technique involved incising the parietal vaginal tunic to allow placement of double ligation of the ductus deferens, testicular artery, and pampiniform plexus en masse. After ligating and transecting these structures, they were introduced back into the tunic, which was closed with a circumferential ligature. The incision site was closed in a routine manner. Both otters recovered well from the procedure. One otter had mild cutaneous dehiscence postoperatively, and the other had no obvious complications. Benefits of this procedure include reduced risk of ligature slippage or loosening and resultant hemorrhage, as provided by the traditional open portion of the castration, and decreased postoperative swelling, as provided by the closed part of the castration. To the authors' knowledge, this is the first time this technique has been described for use in sea otters. PMID:24063115

  18. Ultrastructural aspects of Ellipsomyxa mugilis (Myxozoa: Ceratomyxidae) spores and developmental stages in Nereis diversicolor (Polychaeta: Nereidae).

    PubMed

    Rangel, Luis Filipe; Azevedo, Carlos; Casal, Graça; Santos, Maria João

    2012-06-01

    The ultrastructure of the spores and developmental stages of Ellipsomyxa mugilis in Nereis diversicolor were studied by transmission electron microscopy. The ultrastructure features and the developmental stages show many similarities with the general pattern described for other actinospores. However, several new features are definitely worth noting. For example, tetranucleated cells precede the formation of the initial pansporocyst, which preserves the 2 original enveloping cells until the end of sporogony. In the initial stages of sporogony, the future sporoplasm cell acquires the first secondary cell by an engulfment process. In the final stage of sporogony, spores are formed by a sporoplasm with 2 secondary cells and 1 somatic nucleus, and the polar capsule has a polar filament with a helicoidal arrangement possessing 7-8 coils. PMID:22263603

  19. Matching ecological functioning with polychaete morphology: Consistency patterns along sedimentary habitats

    NASA Astrophysics Data System (ADS)

    Otegui, Mariana B. P.; Brauko, Kalina M.; Pagliosa, Paulo R.

    2016-08-01

    The relationship between form and function is usually evident and reflect causal relationships in ecological interactions. However, the consistency of the taxonomical and functional approaches versus a morphological approach is yet to be assessed and applied to benthic-sediment relationships. Here, we propose a new functional classification based on morphological characteristics using polychaetes. To test the validity of the framework we assess the consistency between polychaete responses to distinct sedimentary environments using morphological, taxonomical and biological traits approaches, and comparing the patterns of polychaete responses at local and regional scales. The selected morphological characteristics were pharynx complexity, jaws presence, feeding palps, head appendages, body appendages, body support structures, branchiae and body regionalization, as well as number of segments, which were categorized according to presence, size, number or type of structure. The novel morphological method was successfully applied and all analyses showed consistent faunal patterns of variation along muddy and sandy habitats at the distinct spatial scales. Nevertheless, in the three case studies the morphological method explained more over the general variability and was more concise than the other two methods, emphasizing the reliability of a functional approach. The distinct set of morphological characteristics found in muddy and sandy habitats reflected two different ecological roles of polychaetes. Discretely motile, small sized and of low sensibility polychaetes prevailed in muddy habitats, while sandy sediments were dominated by organisms with richer and more heterogeneous characteristics. The responses of the morphological analysis were very similar to the taxonomical and biological traits analysis, but with a much higher explanatory power, meaning that morphology provides a robust approach for studying the ecological functionality of marine benthic systems.

  20. A Tri-Oceanic Perspective: DNA Barcoding Reveals Geographic Structure and Cryptic Diversity in Canadian Polychaetes

    PubMed Central

    Carr, Christina M.; Hardy, Sarah M.; Brown, Tanya M.; Macdonald, Tara A.; Hebert, Paul D. N.

    2011-01-01

    Background Although polychaetes are one of the dominant taxa in marine communities, their distributions and taxonomic diversity are poorly understood. Recent studies have shown that many species thought to have broad distributions are actually a complex of allied species. In Canada, 12% of polychaete species are thought to occur in Atlantic, Arctic, and Pacific Oceans, but the extent of gene flow among their populations has not been tested. Methodology/Principal Findings Sequence variation in a segment of the mitochondrial cytochrome c oxidase I (COI) gene was employed to compare morphological versus molecular diversity estimates, to examine gene flow among populations of widespread species, and to explore connectivity patterns among Canada's three oceans. Analysis of 1876 specimens, representing 333 provisional species, revealed 40 times more sequence divergence between than within species (16.5% versus 0.38%). Genetic data suggest that one quarter of previously recognized species actually include two or more divergent lineages, indicating that richness in this region is currently underestimated. Few species with a tri-oceanic distribution showed genetic cohesion. Instead, large genetic breaks occur between Pacific and Atlantic-Arctic lineages, suggesting their long-term separation. High connectivity among Arctic and Atlantic regions and low connectivity with the Pacific further supports the conclusion that Canadian polychaetes are partitioned into two distinct faunas. Conclusions/Significance Results of this study confirm that COI sequences are an effective tool for species identification in polychaetes, and suggest that DNA barcoding will aid the recognition of species overlooked by the current taxonomic system. The consistent geographic structuring within presumed widespread species suggests that historical range fragmentation during the Pleistocene ultimately increased Canadian polychaete diversity and that the coastal British Columbia fauna played a minor

  1. Cytological and Transcriptional Dynamics Analysis of Host Plant Revealed Stage-Specific Biological Processes Related to Compatible Rice-Ustilaginoidea virens Interaction

    PubMed Central

    Chao, Jinquan; Jin, Jie; Wang, Dong; Han, Ran; Zhu, Renshan; Zhu, Yingguo; Li, Shaoqing

    2014-01-01

    Abstract Rice false smut, a fungal disease caused by Ustilaginoidea virens is becoming a severe detriment to rice production worldwide. However, little is known about the molecular response of rice to attacks by the smut pathogen. In this article, we define the initial infection process as having three stages: initial colonization on the pistil (stage 1, S1), amplification on the anther (stage 2, S2) and sporulation in the anther chambers (stage 3, S3). Based on the transcriptome of rice hosts in response to U. virens in two separate years, we identified 126, 204, and 580 specific regulated genes in their respective stages S1, S2, and S3, respectively, by excluding common expression patterns in other openly biotic/abiotic databases using bioinformatics. As the disease progresses, several stage-specific biological processes (BP) terms were distinctively enriched: “Phosphorylation” in stage S1, “PCD” in S2, and “Cell wall biogenesis” in S3, implying a concise signal cascade indicative of the tactics that smut pathogens use to control host rice cells during infection. 113 regulated genes were coexpressed among the three stages. They shared highly conserved promoter cis-element in the promoters in response to the regulation of WRKY and Myb for up-regulation, and ABA and Ca2+ for down regulation, indicating their potentially critical roles in signal transduction during rice-U. virens interaction. We further analyzed seven highly regulated unique genes; four were specific to pollen development, implying that pollen-related genes play critical roles in the establishment of rice susceptibility to U. virens. To my knowledge, this is the first report about probing of molecular response of rice to smut pathogen infection, which will greatly expand our understanding of the molecular events surrounding infection by rice false smut. PMID:24646527

  2. Characteristics of a β-1,4-D endoglucanase from Trichoderma virens wholly applied in a palm-fruit husk-based diet for poultry layers

    PubMed Central

    Odeniyi, Olubusola A.; Onilude, Anthony A.; Ayodele, Maria A.

    2012-01-01

    The characteristics of an endoglucanase produced by a Trichoderma virens strain T9 newly isolated from a palm-fruit husk dump site, its physiological characteristics and enzyme production were studied. Whole cells of the depolymerizing-enzyme producing T. virens were applied to palm-fruit husk and bird performance characteristics when employed as poultry diet additive were considered. Endoglucanase activity in submerged fermentation was 1.6 nkat. Optimum activity was recorded at pH 6.0 and 55°C. The enzyme retained 50% residual glucanase activity at 70°C for 10 minutes. 1.0% Tween-80 and SDS yielded endoglucanase activity 2.15 times higher than the control. Activity was boosted by 20mM Ca2+ (115.0%); 10mM K+ (106.5%); and was totally inhibited by 1mM Hg2+. The addition of T. virens-fermented palm-fruit husk with other layer feed components on the bird characteristics showed that change in bird weight between the control and test birds were not significantly different (p>0.05) but differed in terms of daily feed ingested (p<0.05). The feed to weight-gain ratio was best with the unmodified palm-fruit husk based diet (8.59). There was no significant difference in the egg weights from modified palm-fruit husk based diet and control (p>0.05). The shell thickness (0.64mm) and yolk content (23.61%) were highest in the microbially-modified husk diet. The alternative to maize based diets proffered by the application of T. virens-modified palm-fruit husk in poultry nutrition in terms of bird weight and feed to weight-gain ratio affords the poultry farmer an economic advantage and allows for a greater utilization of the maize in human diets. PMID:24031978

  3. Tvbgn3, a β-1,6-Glucanase from the Biocontrol Fungus Trichoderma virens, Is Involved in Mycoparasitism and Control of Pythium ultimum▿

    PubMed Central

    Djonović, Slavica; Pozo, Maria J.; Kenerley, Charles M.

    2006-01-01

    Even though β-1,6-glucanases have been purified from several filamentous fungi, the physiological function has not been conclusively established for any species. In the present study, the role of Tvbgn3, a β-1,6-glucanase from Trichoderma virens, was examined by comparison of wild-type (WT) and transformant strains in which Tvbgn3 was disrupted (GKO) or constitutively overexpressed (GOE). Gene expression analysis revealed induction of Tvbgn3 in the presence of host fungal cell walls, indicating regulation during mycoparasitism. Indeed, while deletion or overexpression of Tvbgn3 had no evident effect on growth and development, GOE and GKO strains showed an enhanced or reduced ability, respectively, to inhibit the growth of the plant pathogen Pythium ultimum compared to results with the WT. The relevance of this activity in the biocontrol ability of T. virens was confirmed in plant bioassays. Deletion of the gene resulted in levels of disease protection that were significantly reduced from WT levels, while GOE strains showed a significantly increased biocontrol capability. These results demonstrate the involvement of β-1,6-glucanase in mycoparasitism and its relevance in the biocontrol activity of T. virens, opening a new avenue for biotechnological applications. PMID:16997978

  4. RNA Interference of Endochitinases in the Sugarcane Endophyte Trichoderma virens 223 Reduces Its Fitness as a Biocontrol Agent of Pineapple Disease

    PubMed Central

    Romão-Dumaresq, Aline S.; de Araújo, Welington Luiz; Talbot, Nicholas J.; Thornton, Christopher R.

    2012-01-01

    The sugarcane root endophyte Trichoderma virens 223 holds enormous potential as a sustainable alternative to chemical pesticides in the control of sugarcane diseases. Its efficacy as a biocontrol agent is thought to be associated with its production of chitinase enzymes, including N-acetyl-ß-D-glucosaminidases, chitobiosidases and endochitinases. We used targeted gene deletion and RNA-dependent gene silencing strategies to disrupt N-acetyl-ß-D-glucosaminidase and endochitinase activities of the fungus, and to determine their roles in the biocontrol of soil-borne plant pathogens. The loss of N-acetyl-ß-D-glucosaminidase activities was dispensable for biocontrol of the plurivorous damping-off pathogens Rhizoctonia solani and Sclerotinia sclerotiorum, and of the sugarcane pathogen Ceratocystis paradoxa, the causal agent of pineapple disease. Similarly, suppression of endochitinase activities had no effect on R. solani and S. sclerotiorum disease control, but had a pronounced effect on the ability of T. virens 223 to control pineapple disease. Our work demonstrates a critical requirement for T. virens 223 endochitinase activity in the biocontrol of C. paradoxa sugarcane disease, but not for general antagonism of other soil pathogens. This may reflect its lifestyle as a sugarcane root endophyte. PMID:23110120

  5. RNA interference of endochitinases in the sugarcane endophyte Trichoderma virens 223 reduces its fitness as a biocontrol agent of pineapple disease.

    PubMed

    Romão-Dumaresq, Aline S; de Araújo, Welington Luiz; Talbot, Nicholas J; Thornton, Christopher R

    2012-01-01

    The sugarcane root endophyte Trichoderma virens 223 holds enormous potential as a sustainable alternative to chemical pesticides in the control of sugarcane diseases. Its efficacy as a biocontrol agent is thought to be associated with its production of chitinase enzymes, including N-acetyl-ß-D-glucosaminidases, chitobiosidases and endochitinases. We used targeted gene deletion and RNA-dependent gene silencing strategies to disrupt N-acetyl-ß-D-glucosaminidase and endochitinase activities of the fungus, and to determine their roles in the biocontrol of soil-borne plant pathogens. The loss of N-acetyl-ß-D-glucosaminidase activities was dispensable for biocontrol of the plurivorous damping-off pathogens Rhizoctonia solani and Sclerotinia sclerotiorum, and of the sugarcane pathogen Ceratocystis paradoxa, the causal agent of pineapple disease. Similarly, suppression of endochitinase activities had no effect on R. solani and S. sclerotiorum disease control, but had a pronounced effect on the ability of T. virens 223 to control pineapple disease. Our work demonstrates a critical requirement for T. virens 223 endochitinase activity in the biocontrol of C. paradoxa sugarcane disease, but not for general antagonism of other soil pathogens. This may reflect its lifestyle as a sugarcane root endophyte. PMID:23110120

  6. The benthic association between a bivalve and a shell boring polychaete and their potential food sources

    NASA Astrophysics Data System (ADS)

    Silina, A. V.; Zhukova, N. V.

    2012-09-01

    The trophic relationships in the association of the Yeso scallop Mizuhopecten yessoensis and its dominant endobiontic polychaete Polydora brevipalpa, which burrows into the scallop's shell, and their potential food sources were studied using the method of fatty acid biochemical markers. It is shown that the differences in the diet of the scallop and the polychaete allow them to coexist in a close association. The trophic role of the association in the benthic community was revealed. The association selectively utilizes the food sources of the environment. It almost does not consume organic matter of bottom sediments, which allows it to coexist with other species in the community of higher order. There is minimal food competition between the association and detritivorous species; however, association can limit the development of species mostly foraging on diatom algae.

  7. Optimization of hard clams, polychaetes, physical disturbance and denitrifying bacteria of removing nutrients in marine sediment.

    PubMed

    Shen, Hui; Thrush, Simon F; Wan, Xihe; Li, Hui; Qiao, Yi; Jiang, Ge; Sun, Ruijian; Wang, LiBao; He, Peimin

    2016-09-15

    Marine organisms are known to play important roles in transforming nutrients in sediments, however, guidelines to optimize sediment restoration are not available. We conducted a laboratory mesocosm experiment to investigate the role of hard clams, polychaetes, the degree of physical disturbance and denitrifying bacterial concentrations in removing total nitrogen (TN), total phosphorus (TP), and total organic carbon (TOC) in marine sediments. Response surface methodology was employed to analyze the results of initial experiments and in a subsequent experiment identified optimal combinations of parameters. Balancing the TN, TP, TOC removal efficiency, our model predicted 39% TN removal, 33% TP removal, and 42% TOC removal for a 14-day laboratory bioremediation trial using hard clams biomass of 1.2kgm(-2), physical disturbance depth of 16.4cm, bacterial density of 0.18Lm(-2), and polychaetes biomass of 0.16kgm(-2), respectively. These results emphasize the value of combining different species in field-based bioremediation. PMID:27371956

  8. Managing the Marine Aquarium Trade: Revealing the Data Gaps Using Ornamental Polychaetes

    PubMed Central

    Murray, Joanna M.; Watson, Gordon J.; Giangrande, Adriana; Licciano, Margherita; Bentley, Matt G.

    2012-01-01

    The marine aquarium industry has great potential to generate jobs in low-income coastal communities creating incentives for the maintenance of a healthy coral reef, if effectively managed. In the absence of current monitoring or legislation to govern the trade, baseline information regarding the species, number and source location of animals traded is missing despite being critical for its successful management and sustainability. An industry assessment to establish the number and provenance of species of ornamental polychaetes (sabellids and serpulids) traded was undertaken across UK wholesalers and retailers. Six geographical regions exporting fan worms were identified. Singapore contributed the highest percentage of imports, but of only one worm “type” whereas Bali, the second largest source, supplied five different worm “types”. Over 50% of UK retailers were supplied by one wholesaler while the remainder were stocked by a mixture of one other wholesaler and/or direct imports from the source country. We estimate that up to 18,500 ornamental polychaetes (16,980 sabellids and 1,018 serpulids) are sold annually in the UK revealing a drastic underestimation of currently accepted trade figures. Incorrect identification (based on exporting region or visual characteristics) of traded animals exacerbates the inaccuracy in market quantification, although identification of preserved sabellids using published keys proved just as inconclusive with high within-species variability and the potential for new or cryptic species. A re-description of the polychaete groups traded using a combination of molecular and morphological techniques is necessary for effective identification and market quantification. This study provides the first assessment of ornamental polychaetes but more importantly highlights the issues surrounding the collection of baseline information necessary to manage the aquarium trade. We recommend that future management should be community based and

  9. Managing the marine aquarium trade: revealing the data gaps using ornamental polychaetes.

    PubMed

    Murray, Joanna M; Watson, Gordon J; Giangrande, Adriana; Licciano, Margherita; Bentley, Matt G

    2012-01-01

    The marine aquarium industry has great potential to generate jobs in low-income coastal communities creating incentives for the maintenance of a healthy coral reef, if effectively managed. In the absence of current monitoring or legislation to govern the trade, baseline information regarding the species, number and source location of animals traded is missing despite being critical for its successful management and sustainability. An industry assessment to establish the number and provenance of species of ornamental polychaetes (sabellids and serpulids) traded was undertaken across UK wholesalers and retailers. Six geographical regions exporting fan worms were identified. Singapore contributed the highest percentage of imports, but of only one worm "type" whereas Bali, the second largest source, supplied five different worm "types". Over 50% of UK retailers were supplied by one wholesaler while the remainder were stocked by a mixture of one other wholesaler and/or direct imports from the source country. We estimate that up to 18,500 ornamental polychaetes (16,980 sabellids and 1,018 serpulids) are sold annually in the UK revealing a drastic underestimation of currently accepted trade figures. Incorrect identification (based on exporting region or visual characteristics) of traded animals exacerbates the inaccuracy in market quantification, although identification of preserved sabellids using published keys proved just as inconclusive with high within-species variability and the potential for new or cryptic species. A re-description of the polychaete groups traded using a combination of molecular and morphological techniques is necessary for effective identification and market quantification. This study provides the first assessment of ornamental polychaetes but more importantly highlights the issues surrounding the collection of baseline information necessary to manage the aquarium trade. We recommend that future management should be community based and site

  10. Inter-annual species-level variations in an abyssal polychaete assemblage (Sta. M, NE Pacific, 4000 m)

    NASA Astrophysics Data System (ADS)

    Laguionie-Marchais, Claire; Paterson, Gordon L. J.; Bett, Brian J.; Smith, Kenneth L.; Ruhl, Henry A.

    2016-01-01

    Understanding the dynamics of abyssal community structure and function has become increasingly important as deep-sea resource exploitation and climate change pressures are expected to ramp up. This time-series study investigates macrofaunal polychaete dynamics at a station in the North East Pacific (Sta. M; 35° N 123° W, 4000 m, 1991-2011). Infaunal polychaete species were identified and their proxy biomass and proxy energy use rate estimated. The assemblage comprised 167 species, having a composition consistent with other abyssal areas globally. Significant changes in univariate and multivariate parameters (rank abundance distribution, Simpson's diversity index, and species and functional group composition) were detected across 1991-2011. However, no change in biomass or energy use rate was apparent through the time-series. The largest changes in the polychaete assemblage coincided with both an increase in sinking particulate organic carbon flux to the seafloor in 2007, and a 40 km relocation of the sampling location to a site 100 m shallower, preventing a conclusive assessment of which might drive the observed variation. Analyses prior to the change of sampling location showed that the polychaete assemblage composition dynamics were primary driven by food supply variation. Changes in several species were also lagged to changes in POC flux by 4-10 months. The polychaete fauna exhibited a significant positive relationship between total density and total energy use rate, suggesting population-level tracking of a common resource (e.g. POC flux food supply). Neither compensatory nor energetic zero-sum dynamics were detected among the polychaete assemblage, but the results suggest that the latter occur in the macrofaunal community as a whole. The results do indicate (a) potential control of species composition, and the density of individual key species, by food supply, when the time-series prior to the sampling location was analysed separately, and (b) generally

  11. Butyltin residues in southern sea otters (Enhydra lutris nereis) found dead along California coastal waters

    USGS Publications Warehouse

    Kannan, K.; Guruge, K.S.; Thomas, N.J.; Tanabe, S.; Giesy, J.P.

    1998-01-01

    Tributyltin (TBT) and its degradation products, mono- (MBT) and dibutyltin (DBT), were determined in liver, kidney, and brain tissues of adult southern sea otters (Enhydra lutris nereis) found dead along the coast of California during 1992a??1996. Hepatic concentrations of butyltin compounds (BTs = MBT + DBT + TBT) ranged from 40 to 9200 ng/g wet wt, which varied depending on the sampling location and gender. Concentrations of BTs in sea otters were comparable to those reported in stranded bottlenose dolphins from the U.S. Atlantic Coast during 1989a??1994. Greater accumulation of butyltins in sea otters was explained by their bottom-feeding habit and the diet that consists exclusively of invertebrates such as mollusks and gastropods. Livers of female sea otters contained approximately 2-fold greater concentrations of BTs than did those of males. The composition of butyltin compounds in sea otter tissues was predominated by TBT in most cases and suggestive of recent exposure. Large harbors such as Monterey Harbor that handle ships legally painted with TBT-containing antifouling paints continued to experience ecotoxicologically significant butyltin contamination. Sea otters, which were affected by infectious diseases, contained greater concentrations of BTs in their tissues than those that died from trauma and other unknown causes.

  12. Osteoarthritis of the temporomandibular joint in southern sea otters (Enhydra lutris nereis).

    PubMed

    Arzi, B; Winer, J N; Kass, P H; Verstraete, F J M

    2013-11-01

    Museum skull specimens (n = 1,008) of southern sea otters (Enhydra lutris nereis) were examined macroscopically according to defined criteria for the presence, severity and characteristics of temporomandibular joint osteoarthritis (TMJ-OA). The specimens were from stranded young adult to adult animals. Overall, 4.1% of the specimens had findings consistent with TMJ-OA. Of these, 61.0% were from females and 39.0% were from males. In addition, 85.4% of the affected specimens were from adults and 14.6% were from young adults. However, there was no significant association between age and sex with the presence or severity of TMJ-OA. Lesion severity was mild in 41.5%, moderate in 19.5% and severe in 39.0% of affected specimens. The most prominent changes were the presence of osteophytes and subchondral bone defects and porosity. The mandibular condylar process and fossa were affected equally. The lengths of the right and left mandibular heads were significantly associated with age (P = 0.002 and P = 0.003, respectively) and sex (P = 0.0009 and P = 0.001, respectively), but not with the presence of TMJ-OA. The significance of this disease in sea otters remains elusive, but this condition may play an important role in survival of these animals. PMID:23721871

  13. The effect of organic pollution on local distribution of Nereis diversicolor and Corophium volutator

    NASA Astrophysics Data System (ADS)

    Esselink, P.; van Belkum, J.; Essink, K.

    Distribution patterns of Nereis diversicolor and Corophium volutator in the SE-Dollard, a 92 km 2 tidal flat area in the NE Netherlands are described. Body condition as well as the maximal size of juvenile worms correlated positively with elevation of the mudflat, probably caused by a better food supply on the higher mudflats. No spatial variation in size was found for C. volutator. N. diversicolor disappeared from ˜1 km 2 of the intertidal mudflats in the autumn of 1985 as a consequence of the seasonal waste discharges, whereas C. volutator disappeared from an area of ˜4 km 2. Though the discharges decreased by almost 50% from 1982 to 1985, N. diversicolor disappeared from about the same area in the 2 years. N. diversicolor is the main prey species of the avocet Recurvirostra avosetta, large flocks of which stay in the Dollard during autumn migration. Though the avocets lost ˜30% of their potential feeding area in the Dollard in the 1970s because of the high waste discharges, against only 5 to 10% in 1982 and thereafter (at significant lower discharges), the numbers of the avocets did not respond to the decrease of the discharges.

  14. Glutathione-S-transferase in Nereis succinea (Polychaeta) and its induction by xeno-estrogen.

    PubMed

    Ayoola, James A O; García-Alonso, Javier; Hardege, Jörg D

    2011-10-01

    The need to replace or at least to reduce the use of vertebrates in toxicity tests is a timely major concern in research and industry but to date, efforts made to minimize their use are still far from complete. Increasing demands for toxicity tests put considerable pressures upon the development of future fast and efficient test methods using invertebrates. In fact, to date, few studies provide links between biochemical and cellular effects of xeno-estrogens in aquatic invertebrates. Glutathione-S-transferase (GST) activity, as a biomarker of stress exposure, was measured in the population of clamworms (Nereis succinea) from Cardiff Bay. In addition, we examined the effect of single exposure to nonylphenol (NP) on this enzymatic activity. Field study results showed a relationship between the worm's size, reproductive status, and GST activity from the field population. In addition, we show a significant increase in the GST activity at 100 μg/L NP with sex-specific responses. The xeno-estrogens, which could affect reproduction of nereid by interfering in normal endocrinological pathways, are eliminated through GST by conjugation with glutathione. This work shows for the first time that GST activity depends on sex and stage of the clamworms and also that the xeno-estrogen NP induces its activity. This study supports the use of this species as a bioindicator of aquatic pollution and lays the foundation to causally link toxic exposure with reproductive output. PMID:20549611

  15. Osteosarcoma of the maxilla with concurrent osteoma in a southern sea otter (Enhydra lutris nereis).

    PubMed

    Rodriguez-Ramos Fernandez, J; Thomas, N J; Dubielzig, R R; Drees, R

    2012-01-01

    Southern sea otters (Enhydra lutris nereis) are threatened marine mammals that belong to the family Mustelidae and are native to the coast of Central California. Neoplasia is reported infrequently in sea otters. An adult female free-ranging southern sea otter was found alive at Pebble Beach, Monterey County, California, on January 1st, 1994 and died soon after capture. The carcass was submitted to the US Geological Survey - National Wildlife Health Center for necropsy examination. Grossly, a mass with rubbery texture was firmly attached to the left maxillary region of the skull and the nasopharynx was occluded by soft neoplastic tissue. Post-mortem skull radiographs showed an oval, smoothly marginated mineralized opaque mass centered on the left maxilla, extending from the canine tooth to caudal to the molar and replacing portions of the zygomatic arch and palatine and temporal bones. The majority of the mass protruded laterally from the maxilla and was characterized by central homogeneous mineral opacity. Microscopically, the mass was characterized by fully differentiated lamellar non-osteonal bone that expanded beyond the margins of the adjacent normal osteonal bone. Sections of the nasopharyngeal mass were comprised of moderately pleomorphic cells with bony stroma. Gross, microscopical and radiological findings were compatible with maxillary osteosarcoma with concurrent osteoma. PMID:22520807

  16. Osteosarcoma of the maxilla with concurrent osteoma in a southern sea otter (Enhydra lutris nereis)

    USGS Publications Warehouse

    Fernandez, J. Rodriguez-Ramos; Thomas, N.J.; Dubielzig, R.R.; Drees, R.

    2012-01-01

    Southern sea otters (Enhydra lutris nereis) are threatened marine mammals that belong to the family Mustelidae and are native to the coast of Central California. Neoplasia is reported infrequently in seaotters. An adult female free-ranging southern sea otter was found alive at Pebble Beach, Monterey County, California, on January 1st, 1994 and died soon after capture. The carcass was submitted to the US Geological Survey – National Wildlife Health Center for necropsy examination. Grossly, a mass with rubbery texture was firmly attached to the left maxillary region of the skull and the nasopharynx was occluded by soft neoplastic tissue. Post-mortem skull radiographs showed an oval, smoothly marginated mineralized opaque mass centered on the left maxilla, extending from the canine tooth to caudal to the molar and replacing portions of the zygomatic arch and palatine and temporal bones. The majority of the mass protruded laterally from the maxilla and was characterized by central homogeneous mineral opacity. Microscopically, the mass was characterized by fully differentiated lamellar non-osteonal bone that expanded beyond the margins of the adjacent normal osteonal bone. Sections of the nasopharyngeal mass were comprised of moderately pleomorphic cells with bony stroma. Gross, microscopical and radiological findings were compatible with maxillary osteosarcoma with concurrent osteoma.

  17. Changes in contaminant distributions with trophic level in a marine food chain study

    SciTech Connect

    Pruell, R.J.; Johnson, M.W.; Taplin, B.K.; McGovern, D.G.; Montmarquet, B.T.

    1994-12-31

    A laboratory study was designed to investigate the transfer of chlorinated organic contaminants from sediments to marine biota in a simplified marine food chain. Sediments collected from the Passaic River, NJ, which contained high concentrations of polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), PCBs and chlorinated pesticides, were used as the contamination source. Polychaete worms (Nereis virens) were exposed to Passaic River sediment for 70 days to allow steady-state concentrations to be achieved and then these organisms were fed to a crustacean, the American lobster (Homarus americanus). Contaminant distributions were altered significantly as they passed from sediments to polychaetes and then to the lobster. PCDDs and PCDFs containing four or five chlorines were accumulated by the polychaetes and lobster; however, the highly chlorinated congeners were not accumulated. PCB patterns in lobsters indicated that these organisms metabolized many PCB congeners. Coplanar PCBs did not appear to be metabolized and therefore became enriched relative to total PCB levels in the lobsters. Lobsters also greatly altered the ratios of chlordane and DDT series compounds relative to those in the sediments and polychaetes.

  18. The Y137H mutation of VvCYP51 gene confers the reduced sensitivity to tebuconazole in Villosiclava virens

    PubMed Central

    Wang, Fei; Lin, Yang; Yin, Wei-Xiao; Peng, You-Liang; Schnabel, Guido; Huang, Jun-Bin; Luo, Chao-Xi

    2015-01-01

    Management of rice false smut disease caused by Villosiclava virens is dependent on demethylation inhibitor (DMI) fungicides. Investigation of molecular mechanisms of resistance is therefore of upmost importance. In this study the gene encoding the target protein for DMI fungicides (VvCYP51) was cloned and investigated. The VvCYP51 gene in the resistant mutant revealed both a change from tyrosine to histidine at position 137 (Y137H) and elevated gene expression compared to the parental isolate. In order to determine which of these mechanisms was responsible for the reduced sensitivity to DMI fungicide tebuconazole, transformants expressing the mutated or the wild type VvCYP51 gene were generated. Transformants carrying the mutated gene were more resistant to tebuconazole compared to control transformants lacking the mutation, but the expression of the VvCYP51 gene was not significantly correlated with EC50 values. The wild type VvCYP51 protein exhibited stronger affinity for tebuconazole compared to the VvCYP51/Y137H in both molecular docking analysis and experimental binding assays. The UV-generated mutant as well as transformants expressing the VvCYP51/Y137H did not exhibit significant fitness penalties based on mycelial growth and spore germination, suggesting that isolates resistant to DMI fungicides based on the Y137H mutation may develop and be competitive in the field. PMID:26631591

  19. Characterization of class II β chain major histocompatibility complex genes in a family of Hawaiian honeycreepers: 'amakihi (Hemignathus virens).

    PubMed

    Jarvi, Susan I; Bianchi, Kiara R; Farias, Margaret Em; Txakeeyang, Ann; McFarland, Thomas; Belcaid, Mahdi; Asano, Ashley

    2016-07-01

    Hawaiian honeycreepers (Drepanidinae) have evolved in the absence of mosquitoes for over five million years. Through human activity, mosquitoes were introduced to the Hawaiian archipelago less than 200 years ago. Mosquito-vectored diseases such as avian malaria caused by Plasmodium relictum and Avipoxviruses have greatly impacted these vulnerable species. Susceptibility to these diseases is variable among and within species. Due to their function in adaptive immunity, the role of major histocompatibility complex genes (Mhc) in disease susceptibility is under investigation. In this study, we evaluate gene organization and levels of diversity of Mhc class II β chain genes (exon 2) in a captive-reared family of Hawaii 'amakihi (Hemignathus virens). A total of 233 sequences (173 bp) were obtained by PCR+1 amplification and cloning, and 5720 sequences were generated by Roche 454 pyrosequencing. We report a total of 17 alleles originating from a minimum of 14 distinct loci. We detected three linkage groups that appear to represent three distinct haplotypes. Phylogenetic analysis revealed one variable cluster resembling classical Mhc sequences (DAB) and one highly conserved, low variability cluster resembling non-classical Mhc sequences (DBB). High net evolutionary divergence values between DAB and DBB resemble that seen between chicken BLB system and YLB system genes. High amino acid identity among non-classical alleles from 12 species of passerines (DBB) and four species of Galliformes (YLB) was found, suggesting that these non-classical passerine sequences may be related to the Galliforme YLB sequences. PMID:26971289

  20. Regulation of Morphogenesis and Biocontrol Properties in Trichoderma virens by a VELVET Protein, Vel1▿ †

    PubMed Central

    Mukherjee, Prasun K.; Kenerley, Charles M.

    2010-01-01

    Mycoparasitic strains of Trichoderma are applied as commercial biofungicides for control of soilborne plant pathogens. Although the majority of commercial biofungicides are Trichoderma based, chemical pesticides, which are ecological and environmental hazards, still dominate the market. This is because biofungicides are not as effective or consistent as chemical fungicides. Efforts to improve these products have been limited by a lack of understanding of the genetic regulation of biocontrol activities. In this study, using gene knockout and complementation, we identified the VELVET protein Vel1 as a key regulator of biocontrol, as well as morphogenetic traits, in Trichoderma virens, a commercial biocontrol agent. Mutants with mutations in vel1 were defective in secondary metabolism (antibiosis), mycoparasitism, and biocontrol efficacy. In nutrient-rich media they also lacked two types of spores important for survival and development of formulation products: conidia (on agar) and chlamydospores (in liquid shake cultures). These findings provide an opportunity for genetic enhancement of biocontrol and industrial strains of Trichoderma, since Vel1 is very highly conserved across three Trichoderma species. PMID:20154111

  1. Development of PLA films containing oregano essential oil (Origanum vulgare L. virens) intended for use in food packaging.

    PubMed

    Llana-Ruiz-Cabello, M; Pichardo, S; Bermúdez, J M; Baños, A; Núñez, C; Guillamón, E; Aucejo, S; Cameán, A M

    2016-08-01

    Consumers' concerns about the environment and health have led to the development of new food packaging materials avoiding petroleum-based matrices and synthetic additives. The present study has developed polylactic acid (PLA) films containing different concentrations of essential oil from Origanum vulgare L. virens (OEO). The effectiveness of this new active packaging was checked for use in ready-to-eat salads. A plasticising effect was observed when OEO was incorporated in PLA films. The rest of the mechanical and physical properties of developed films did not show much change when OEO was included in the film. An antioxidant effect was recorded only for films containing the highest percentages of the active agent (5% and 10%). In addition, films exhibited in vitro antibacterial activity against Staphylococcus aureus, Yersinia enterocolitica, Listeria monocytogenes, Enterococcus faecalis and Staphylococcus carnosus. Moreover, in ready-to-eat salads, antimicrobial activity was only observed against yeast and moulds, where 5% and 10% of OEO was the most effective. PMID:27455176

  2. Metal pollution in a contaminated bay: relationship between metal geochemical fractionation in sediments and accumulation in a polychaete.

    PubMed

    Fan, Wenhong; Xu, Zhizhen; Wang, Wen-Xiong

    2014-08-01

    Jinzhou Bay in Northern China has been seriously contaminated with metals due to the impacts of smelting activities. In this study, we investigated the relationship between metal accumulation in a deposit-feeding polychaete Neanthes japonica and metal concentration and geochemical fractionation (Cd, Cu, Pb, Zn and Ni) in sediments of Jinzhou Bay. Compared with the historical data, metals in the more mobile geochemical fraction (exchangeable and carbonate fractions) were gradually partitioned into the more stable fraction (Fe-Mn oxides) over time. Metal concentration and geochemical fractionation in sediment significantly affected metal bioavailability and accumulation in polychaetes, except for Ni. Metal accumulation in polychaetes was significantly influenced by Fe or Mn content, and to a lesser degree by organic matter. Prediction of metal bioaccumulation in polychaetes was greatly improved by normalizing metal concentrations to Mn content in sediment. The geochemical fractionation of metals in sediments including the exchangeable, organic matter and Fe-Mn oxides were important in controlling the sediment metal bioavailability to polychaetes. PMID:24811945

  3. Neuroanatomy of the Vestimentiferan Tubeworm Lamellibrachia satsuma Provides Insights into the Evolution of the Polychaete Nervous System

    PubMed Central

    Miyamoto, Norio; Shinozaki, Ayuta; Fujiwara, Yoshihiro

    2013-01-01

    Vestimentiferan tubeworms are marine invertebrates that inhabit chemosynthetic environments, and although recent molecular phylogenetic analyses have suggested that vestimentiferan tubeworms are derived from polychaete annelids, they show some morphological features that are different from other polychaetes. For example, vestimentiferans lack a digestive tract and have less body segments and comparative neuroanatomy can provide essential insight into the vestimentiferan body plan and its evolution. In the present study, we investigated the adult nervous system in the vestimentiferan Lamellibrachia satsuma using antibodies against synapsin, serotonin, FMRMamide and acetylated α-tubulin. We also examined the expressions of neural marker genes, elav and synaptotagmin to reveal the distribution of neuronal cell bodies. Brain anatomy shows simple organization in Lamellibrachia compared to other polychaetes. This simplification is probably due to the loss of the digestive tract, passing through the body between the brain and the subesophageal ganglion. In contrast, the ventral nerve cord shows a repeated organizational structure as in the other polychaetes, despite the absence of the multiple segmentation of the trunk. These results suggest that the brain anatomy is variable depending on the function and the condition of surrounding tissues, and that the formation of the rope ladder-like nervous system of the ventral nerve cord is independent from segmentation in polychaetes. PMID:23372830

  4. The life cycle of Ceratomyxa shasta, a myxosporean parasite of salmonids, requires a freshwater polychaete as an alternate host.

    PubMed

    Bartholomew, J L; Whipple, M J; Stevens, D G; Fryer, J L

    1997-10-01

    The actinosporean life stage of Ceratomyxa shasta, a myxozoan parasite of salmonids, and the annelid worm that serves as its alternate host were identified in laboratory transmission experiments and their roles were confirmed using molecular techniques. Infection by the parasite occurred in susceptible fish that were either exposed to or force fed the freshwater polychaete, Manayunkia speciosa, infected with the actinosporean. These observations were confirmed using the polymerase chain reaction with primers designed from the C. shasta 18S rDNA sequence. DNA was amplified from polychaetes harboring the actinosporean that caused infection in the fish but not from uninfected polychaetes. Amplified DNA from an infected polychaete was sequenced and its homology with the 18S rDNA sequence of C. shasta spores verified the proposed life cycle. Ultrastructural examination of the actinosporean in the polychaete showed developmental stages in the epidermis rather than within the intestinal epithelium as described for other myxozoans. The methods described will be useful in identifying alternate hosts and morphologically diverse life stages in the complex life cycles of other myxosporea and in understanding the relationships between these parasites and their hosts. PMID:9379291

  5. Neuroanatomy of the vestimentiferan tubeworm Lamellibrachia satsuma provides insights into the evolution of the polychaete nervous system.

    PubMed

    Miyamoto, Norio; Shinozaki, Ayuta; Fujiwara, Yoshihiro

    2013-01-01

    Vestimentiferan tubeworms are marine invertebrates that inhabit chemosynthetic environments, and although recent molecular phylogenetic analyses have suggested that vestimentiferan tubeworms are derived from polychaete annelids, they show some morphological features that are different from other polychaetes. For example, vestimentiferans lack a digestive tract and have less body segments and comparative neuroanatomy can provide essential insight into the vestimentiferan body plan and its evolution. In the present study, we investigated the adult nervous system in the vestimentiferan Lamellibrachia satsuma using antibodies against synapsin, serotonin, FMRMamide and acetylated α-tubulin. We also examined the expressions of neural marker genes, elav and synaptotagmin to reveal the distribution of neuronal cell bodies. Brain anatomy shows simple organization in Lamellibrachia compared to other polychaetes. This simplification is probably due to the loss of the digestive tract, passing through the body between the brain and the subesophageal ganglion. In contrast, the ventral nerve cord shows a repeated organizational structure as in the other polychaetes, despite the absence of the multiple segmentation of the trunk. These results suggest that the brain anatomy is variable depending on the function and the condition of surrounding tissues, and that the formation of the rope ladder-like nervous system of the ventral nerve cord is independent from segmentation in polychaetes. PMID:23372830

  6. Application of "taxocene surrogation" and "taxonomic sufficiency" concepts to fish farming environmental monitoring. Comparison of BOPA index versus polychaete assemblage structure.

    PubMed

    Aguado-Giménez, F; Gairín, J I; Martinez-Garcia, E; Fernandez-Gonzalez, V; Ballester Moltó, M; Cerezo-Valverde, J; Sanchez-Jerez, P

    2015-02-01

    "Taxocene surrogation" and "taxonomic sufficiency" concepts were applied to the monitoring of soft bottoms macrobenthic assemblages influenced by fish farming following two approaches. Polychaete assemblage evaluation through multivariate analysis and the benthic index BOPA were compared. Six fish farms along the Spanish Mediterranean coast were monitored. Polychaete assemblage provided a suitable picture of the impact gradient, being correlated with total free sulphides. BOPA did not support the impact gradient described by the polychaete assemblage, providing erroneous categorizations. The inclusion of several polychaete families, which were locally identified as indicative of affection to recalculate BOPA, resulted in an improved diagnosis and correlation with the impact gradient. Nevertheless, frequent misclassifications occurred. These results suggest that the structure of polychaete families, sulphides and granulometry conform an appropriate strategy for fish farming monitoring. Biotic indices need to be specifically designed for concrete activities, and regionally validated, because of the environmental plasticity of benthic invertebrates. PMID:25460059

  7. Ontogenetic Scaling of Theoretical Bite Force in Southern Sea Otters (Enhydra lutris nereis).

    PubMed

    Law, Chris J; Young, Colleen; Mehta, Rita S

    2016-01-01

    Sexual dimorphism attributed to niche divergence is often linked to differentiation between the sexes in both dietary resources and characters related to feeding and resource procurement. Although recent studies have indicated that southern sea otters (Enhydra lutris nereis) exhibit differences in dietary preferences as well as sexual dimorphism in skull size and shape, whether these intersexual differences translate to differentiation in feeding performances between the sexes remains to be investigated. To test the hypothesis that scaling patterns of bite force, a metric of feeding performance, differ between the sexes, we calculated theoretical bite forces for 55 naturally deceased male and female southern sea otters spanning the size ranges encountered over ontogeny. We then used standardized major axis regressions to simultaneously determine the scaling patterns of theoretical bite forces and skull components across ontogeny and assess whether these scaling patterns differed between the sexes. We found that positive allometric increases in theoretical bite force resulted from positive allometric increases in physiological cross-sectional area for the major jaw adductor muscle and mechanical advantage. Closer examination revealed that allometric increases in temporalis muscle mass and relative allometric decreases in out-lever lengths are driving these patterns. In our analysis of sexual dimorphism, we found that scaling patterns of theoretical bite force and morphological traits do not differ between the sexes. However, adult sea otters differed in their absolute bite forces, revealing that adult males exhibited greater bite forces as a result of their larger sizes. We found intersexual differences in biting ability that provide some support for the niche divergence hypothesis. Continued work in this field may link intersexual differences in feeding functional morphology with foraging ecology to show how niche divergence has the potential to reinforce sexual

  8. Response of Nereis diversicolor population (Polychaeta, Nereididae) to the pollution impact - Authie and Seine estuaries (France)

    NASA Astrophysics Data System (ADS)

    Gillet, P.; Mouloud, M.; Durou, C.; Deutsch, B.

    2008-01-01

    A survey within the French National Programme of Ecotoxicology was carried out in 2002, 2003 and 2004 to study the response of Nereis diversicolor populations (Polychaeta, Nereididae) to the impact of pollution in the Authie estuary (non-contaminated site) and in the Seine estuary (contaminated site). In the period studied, the density varied from 672 ind. m -2 to 3584 ind. m -2 in the Authie estuary and from 80 ind. m -2 to 920 ind. m -2 in the Seine estuary. Biomass varied from 3.94 g m -2 (dry weight) in February 2004 to 38.0 g m -2 in August 2003 in the Authie estuary and from 3.4 g m -2 in February 2002 to 0.6 g m -2 in February 2004 in the Seine estuary. Density and biomass of the populations of N. diversicolor were consistently lower in the Seine estuary than in the Authie estuary. Size frequency histograms permit the analysis of the cohorts as well as the elaboration of the growth curves. For the individuals from the Authie estuary, the relation between dry weight (DW) and length L3 (prostomium, peristomium and chaetiger 1) was DW = 4.2205 L3 2.9832. For those from the Seine estuary, the relation between dry weight and L3 was DW = 0.4697e 1.7209L3. The individuals of N. diversicolor should belong to eight cohorts in Authie estuary (two cohorts each year) instead of six cohorts for those from the Seine estuary. These differences can be attributed to the effect of pollution on the population of N. diversicolor.

  9. Starting a DNA barcode reference library for shallow water polychaetes from the southern European Atlantic coast.

    PubMed

    Lobo, Jorge; Teixeira, Marcos A L; Borges, Luisa M S; Ferreira, Maria S G; Hollatz, Claudia; Gomes, Pedro T; Sousa, Ronaldo; Ravara, Ascensão; Costa, Maria H; Costa, Filipe O

    2016-01-01

    Annelid polychaetes have been seldom the focus of dedicated DNA barcoding studies, despite their ecological relevance and often dominance, particularly in soft-bottom estuarine and coastal marine ecosystems. Here, we report the first assessment of the performance of DNA barcodes in the discrimination of shallow water polychaete species from the southern European Atlantic coast, focusing on specimens collected in estuaries and coastal ecosystems of Portugal. We analysed cytochrome oxidase I DNA barcodes (COI-5P) from 164 specimens, which were assigned to 51 morphospecies. To our data set from Portugal, we added available published sequences selected from the same species, genus or family, to inspect for taxonomic congruence among studies and collection location. The final data set comprised 290 specimens and 79 morphospecies, which generated 99 Barcode Index Numbers (BINs) within Barcode of Life Data Systems (BOLD). Among these, 22 BINs were singletons, 47 other BINs were concordant, confirming the initial identification based on morphological characters, and 30 were discordant, most of which consisted on multiple BINs found for the same morphospecies. Some of the most prominent cases in the latter category include Hediste diversicolor (O.F. Müller, 1776) (7), Eulalia viridis (Linnaeus, 1767) (2) and Owenia fusiformis (delle Chiaje, 1844) (5), all of them reported from Portugal and frequently used in ecological studies as environmental quality indicators. Our results for these species showed discordance between molecular lineages and morphospecies, or added additional relatively divergent lineages. The potential inaccuracies in environmental assessments, where underpinning polychaete species diversity is poorly resolved or clarified, demand additional and extensive investigation of the DNA barcode diversity in this group, in parallel with alpha taxonomy efforts. PMID:26129849

  10. Spatial patterns of biodiversity in the Black Sea: An assessment using benthic polychaetes

    NASA Astrophysics Data System (ADS)

    Surugiu, Victor; Revkov, Nikolai; Todorova, Valentina; Papageorgiou, Nafsika; Valavanis, Vasilis; Arvanitidis, Christos

    2010-06-01

    The current study broadens the biodiversity information available for the Black Sea and neighbouring regions and improves our knowledge about the polychaete biogeographic patterns to be discerned in them. There appears to be a well-defined zoogeocline from the Marmara Sea and Bosphorus Strait to the inner parts of the region (Azov Sea), depicted both as a multivariate pattern and in terms of species (or taxa) numbers. The emergent multivariate pattern complies, to a certain extent, with Jakubova's (1935) views: three main sectors can be defined in the basin: (a) Prebosphoric, (b) the Black Sea and, (c) the Azov Sea, whereas the Bosphorus Strait and Marmara Sea show less faunal affinities with the afore-mentioned sectors. Patterns derived both from the cosmopolitan and Atlanto-Mediterranean species closely follow the one coming from the polychaete species and genera inventories. As a general trend, species numbers decrease along with the decrease in salinity towards the inner parts of the region. The trend is homologous to that seen in the benthic invertebrate inventories of all the major European semi-enclosed regional seas. Salinity and food availability appear to be the dominant abiotic factors correlated, though weakly, with the various patterns deriving from the taxonomic/zoogeographic categories. With the exception of the Anatolia, polychaete inventories from all sectors appear to be random samples of the total inventory of the region, in terms of taxonomic distinctness values. Therefore, these sectoral inventories can be used for future biodiversity/environmental impact assessment studies. A massive invasion of Mediterranean species after the opening of the Black Sea, in the lower Quaternary period, appears to be the likely biogeographic mechanism through which the old Sarmatic fauna was almost completely replaced by species of marine origin.

  11. Authorship of some polychaete (Annelida) names derived from the works of Renier and Savigny.

    PubMed

    Muir, Alexander I; Petersen, Mary E

    2013-01-01

    Full citations of animal specific or generic names ultimately derived from unpublished manuscripts should commemorate the work of the person who described the new species as well as the person who eventually validly published the name. We suggest that biologists should use the following authorships when citing these names: Terebella infundibulum Renier in Meneghini, 1847 (now used in the genus Myxicola); Nereis coccinea Renier in Meneghini, 1847 (now used in the genus Lumbrineris); Thalassema scutatum Renier in Ranzani, 1817 (now known as Sternaspis scutata); Polynoe Savigny in Lamarck, 1818. The case of Myxicola infundibulum is further complicated by a possible homonymy, and to avoid confusion we suggest that the name is used for the Myxicola species found in the Adriatic. PMID:26176114

  12. The Epl1 and Sm1 proteins from Trichoderma atroviride and Trichoderma virens differentially modulate systemic disease resistance against different life style pathogens in Solanum lycopersicum.

    PubMed

    Salas-Marina, Miguel A; Isordia-Jasso, María I; Islas-Osuna, María A; Delgado-Sánchez, Pablo; Jiménez-Bremont, Juan F; Rodríguez-Kessler, Margarita; Rosales-Saavedra, María T; Herrera-Estrella, Alfredo; Casas-Flores, Sergio

    2015-01-01

    Fungi belonging to the genus Trichoderma, commonly found in soil or colonizing plant roots, exert beneficial effects on plants, including the promotion of growth and the induction of resistance to disease. T. virens and T. atroviride secrete the proteins Sm1 and Epl1, respectively, which elicit local and systemic disease resistance in plants. In this work, we show that these fungi promote growth in tomato (Solanum lycopersicum) plants. T. virens was more effective than T. atroviride in promoting biomass gain, and both fungi were capable of inducing systemic protection in tomato against Alternaria solani, Botrytis cinerea, and Pseudomonas syringae pv. tomato (Pst DC3000). Deletion (KO) of epl1 in T. atroviride resulted in diminished systemic protection against A. solani and B. cinerea, whereas the T. virens sm1 KO strain was less effective in protecting tomato against Pst DC3000 and B. cinerea. Importantly, overexpression (OE) of epl1 and sm1 led to an increase in disease resistance against all tested pathogens. Although the Trichoderma WT strains induced both systemic acquired resistance (SAR)- and induced systemic resistance (ISR)-related genes in tomato, inoculation of plants with OE and KO strains revealed that Epl1 and Sm1 play a minor role in the induction of these genes. However, we found that Epl1 and Sm1 induce the expression of a peroxidase and an α-dioxygenase encoding genes, respectively, which could be important for tomato protection by Trichoderma spp. Altogether, these observations indicate that colonization by beneficial and/or infection by pathogenic microorganisms dictates many of the outcomes in plants, which are more complex than previously thought. PMID:25755658

  13. The Epl1 and Sm1 proteins from Trichoderma atroviride and Trichoderma virens differentially modulate systemic disease resistance against different life style pathogens in Solanum lycopersicum

    PubMed Central

    Salas-Marina, Miguel A.; Isordia-Jasso, María I.; Islas-Osuna, María A.; Delgado-Sánchez, Pablo; Jiménez-Bremont, Juan F.; Rodríguez-Kessler, Margarita; Rosales-Saavedra, María T.; Herrera-Estrella, Alfredo; Casas-Flores, Sergio

    2015-01-01

    Fungi belonging to the genus Trichoderma, commonly found in soil or colonizing plant roots, exert beneficial effects on plants, including the promotion of growth and the induction of resistance to disease. T. virens and T. atroviride secrete the proteins Sm1 and Epl1, respectively, which elicit local and systemic disease resistance in plants. In this work, we show that these fungi promote growth in tomato (Solanum lycopersicum) plants. T. virens was more effective than T. atroviride in promoting biomass gain, and both fungi were capable of inducing systemic protection in tomato against Alternaria solani, Botrytis cinerea, and Pseudomonas syringae pv. tomato (Pst DC3000). Deletion (KO) of epl1 in T. atroviride resulted in diminished systemic protection against A. solani and B. cinerea, whereas the T. virens sm1 KO strain was less effective in protecting tomato against Pst DC3000 and B. cinerea. Importantly, overexpression (OE) of epl1 and sm1 led to an increase in disease resistance against all tested pathogens. Although the Trichoderma WT strains induced both systemic acquired resistance (SAR)- and induced systemic resistance (ISR)-related genes in tomato, inoculation of plants with OE and KO strains revealed that Epl1 and Sm1 play a minor role in the induction of these genes. However, we found that Epl1 and Sm1 induce the expression of a peroxidase and an α-dioxygenase encoding genes, respectively, which could be important for tomato protection by Trichoderma spp. Altogether, these observations indicate that colonization by beneficial and/or infection by pathogenic microorganisms dictates many of the outcomes in plants, which are more complex than previously thought. PMID:25755658

  14. Does the introduced polychaete Alitta succinea establish in the Caspian Sea?

    NASA Astrophysics Data System (ADS)

    Ghasemi, Amir Faraz; Taheri, Mehrshad; Jam, Armin

    2013-12-01

    Members of the polychaete family Nereididae do not occur naturally in the Caspian Sea but are documented intentional human introductions that commenced in 1939. However, the identity of the species involved has been uncertain; material has been identified as both Alitta succinea and Hediste diversicolor. In this study, we confirm the presence of both species in the Caspian Sea. We discuss the distribution of both species, based on tolerance to physical factors, especially salinity. Although establishment of this partially predatory Nereidid, as a food reservoir could facilitate the recreation of commercially exploited fish stock, the consequences for native benthic communities are unclear and may be subject to unforeseen negative impacts.

  15. Effects of Nereis diversicolor O. F. Muller abundance on the dissolved phosphate exchange between sediment and overlying water in Palmones River estuary (southern Spain)

    NASA Astrophysics Data System (ADS)

    Clavero, V.; Niell, F. X.; Fernandez, J. A.

    1991-08-01

    Annual variations in dissolved phosphate gradient, sediment porosity, abundance of Nereis diversicolor and phosphate flux were measured in order to determine the pattern of phosphate exchange between the sediment and overlying water in an estuarine system. N. diversicolor abundance is inversely related to the dissolved phosphate gradient while the ratio, measured flux/calculated diffusion flux, increases as does N. diversicolor abundance.

  16. Statistical analysis of polychaete population density: dynamics of dominant species and scaling properties in relative abundance fluctuations

    NASA Astrophysics Data System (ADS)

    Quiroz-Martinez, B.; Schmitt, F. G.; Dauvin, J.-C.

    2012-01-01

    We consider here the dynamics of two polychaete populations based on a 20 yr temporal benthic survey of two muddy fine sand communities in the Bay of Morlaix, Western English Channel. These populations display high temporal variability, which is analyzed here using scaling approaches. We find that population densities have heavy tailed probability density functions. We analyze the dynamics of relative species abundance in two different communities of polychaetes by estimating in a novel way a "mean square drift" coefficient which characterizes their fluctuations in relative abundance over time. We show the usefulness of using new tools to approach and model such highly variable population dynamics in marine ecosystems.

  17. Ellipsomyxa gobii (Myxozoa: Ceratomyxidae) in the common goby Pomatoschistus microps (Teleostei: Gobiidae) uses Nereis spp. (Annelida: Polychaeta) as invertebrate hosts.

    PubMed

    Køie, Marianne; Whipps, Christopher M; Kent, Michael L

    2004-03-01

    Nereis diversicolor O.F. Müller and N. succinea Frey et Leuckart (Polychaeta, Nereidae) living in brackish shallow areas in Denmark are naturally infected with tetractinomyxon actinospores. Infected Nereis spp. were experimentally fed to various potential fish hosts, and the actinosporean stages developed into myxosporean stages of Ellipsomyxa gobii Køie, 2003 (Ceratomyxidae) in the gallbladder of the common goby Pomatoschistus microps (Krøyer) (Gobiidae). The European eel Anguilla anguilla (L.), three-spined stickleback Gasterosteus aculeatus L., small sand eel Ammodytes tobianus L., flounder Platichthys flesus (L.), European plaice Pleuronectes platessa L. and common sole Solea solea (L.) did not become experimentally infected. In Danish shallow brackish areas P. microps is naturally infected with E. gobii, in some areas with a prevalence >90%. We compared small subunit ribosomal DNA sequences of the actinosporean with E. gobii from P. microps. Sequences were identical, which further verifies that both forms belong to the same organism. This is the first myxozoan two-host life cycle in the marine environment. PMID:15139372

  18. Reversion to virulence and efficacy of an attenuated Canarypox vaccine in Hawai'i 'Amakihi (Hemignathus virens).

    PubMed

    Atkinson, Carter T; Wiegand, Kimberly C; Triglia, Dennis; Jarvi, Susan I

    2012-12-01

    Vaccines may be effective tools for protecting small populations of highly susceptible endangered, captive-reared, or translocated Hawaiian honeycreepers from introduced Avipoxvirus, but their efficacy has not been evaluated. An attenuated Canarypox vaccine that is genetically similar to one of two passerine Avipoxvirus isolates from Hawai'i and distinct from Fowlpox was tested to evaluate whether Hawai'i 'Amakihi (Hemignathus virens) can be protected from wild isolates of Avipoxvirus from the Hawaiian Islands. Thirty-one (31) Hawai'i 'Amakihi were collected from high-elevation habitats on Mauna Kea Volcano, where pox transmission is rare, and randomly divided into two groups. One group was vaccinated with Poximune C, whereas the other group received a sham vaccination with sterile water. Four of 15 (27%) vaccinated birds developed life-threatening disseminated lesions or lesions of unusually long duration, whereas one bird never developed a vaccine-associated lesion or "take." After vaccine lesions healed, vaccinated birds were randomly divided into three groups of five and challenged with either a wild isolate of Fowlpox (FP) from Hawai'i, a Hawai'i 'Amakihi isolate of a Canarypox-like virus (PV1), or a Hawai'i 'Amakihi isolate of a related, but distinct, passerine Avipoxvirus (PV2). Similarly, three random groups of five unvaccinated 'Amakihi were challenged with the same virus isolates. Vaccinated and unvaccinated 'Amakihi challenged with FP had transient infections with no clinical signs of infection. Mortality in vaccinated 'Amakihi challenged with PV1 and PV2 ranged from 0% (0/5) for PV1 to 60% (3/5) for PV2. Mortality in unvaccinated 'Amakihi ranged from 40% (2/5) for PV1 to 100% (5/5) for PV2. Although the vaccine provided some protection against PV1, both potential for vaccine reversion and low efficacy against PV2 preclude its use in captive or wild honeycreepers. PMID:23272348

  19. Purification, characterization, and cDNA cloning of opine dehydrogenases from the polychaete rockworm Marphysa sanguinea.

    PubMed

    Endo, Noriyuki; Kan-no, Nobuhiro; Nagahisa, Eizoh

    2007-06-01

    Alanopine dehydrogenase (AlDH) and three isoforms of strombine/alanopine dehydrogenase (St/AlDH) were purified from muscle tissue of the polychaete rockworm Marphysa sanguinea. The four enzymes, which can be distinguished by the isoelectric point, are monomeric 42 kDa proteins, possess similar pH-activity profiles, and display specificity for pyruvate and NAD(H). The three isoforms of St/AlDH show equivalent Km and Vmax for glycine and L-alanine and for D-strombine and meso-alanopine. Free amino acid levels in the muscle and D-strombine accumulation in vivo during muscle activity suggest that St/AlDHs function physiologically as StDH. AlDH shows specificity for L-alanine and meso-alanopine, but not for glycine or D-strombine. The amino acid sequences of AlDH and one of the St/AlDH isoforms were determined by a combination of amino acid sequence analysis and cDNA cloning. St/AlDH cDNA consisted of 1586 bp nucleotides that encode a 399-residue protein (43,346.70 Da), and AlDH cDNA consisted of 1587 bp nucleotides that encode a 399-residue protein (43,886.68 Da). The two amino acid sequences deduced from the cDNA displayed 67% amino acid identity, with greatest similarity to that of tauropine dehydrogenase from the polychaete Arabella iricolor. PMID:17350870

  20. Reproductive toxicity assessment of benzo[a]pyrene in the marine polychaete Perinereis nuntia

    NASA Astrophysics Data System (ADS)

    Wu, Qingyang; Wang, Shuqi; Chen, Xiaopeng; Li, Ping

    2016-07-01

    Benzo[a]pyrene (B[a]P) is an increasingly present marine environmental pollutant, yet our understanding of the long-term consequences of reproductive toxicity in marine benthic polychaetes remains limited. To test the reproductive toxicity of B[a]P on polychaetes, Perinereis nuntia was exposed to B[a]P-contaminated artificial seawater and sexual maturation, the sex ratio, number of eggs spawned, fertilization and hatching rated, as well as vitellogenin (VTG) mRNA expression levels were analyzed. A low concentration of B[a]P (2.5 μg/L) had no Effects on the rate of sexual maturation, spawning, or fertilization but significantly increased the sex ratio (female: male) from 1.6±0.15:1 to 2.3±0.18:1, inhibited hatching rate by 27%, and significantly increased VTG mRNA expression level by 3.7-fold following a 60-day exposure, compared with those in the solvent controls. A higher concentration of B[a]P (25 μg/L) caused more serious Effects; sexual maturation, fertilization success, and hatching decreased by 31%, 17% and 46%, respectively, and the sex ratio (female: male) and VTG mRNA gene expression level increased by 54% and 7.1-fold, respectively. These results demonstrate that sublethal concentrations of B[a]P negatively aff ect reproductive performance of the sandworm P. nuntia.

  1. Variability of Polychaete Secondary Production in Intertidal Creek Networks along a Stream-Order Gradient

    PubMed Central

    Chu, Tianjiang; Sheng, Qiang; Wang, Sikai; Wu, Jihua

    2014-01-01

    Dendritic tidal creek networks are important habitats for sustaining biodiversity and ecosystem functioning in salt marsh wetlands. To evaluate the importance of creek heterogeneity in supporting benthic secondary production, we assess the spatial distribution and secondary production of a representative polychaete species (Dentinephtys glabra) in creek networks along a stream-order gradient in a Yangtze River estuarine marsh. Density, biomass, and secondary production of polychaetes were found to be highest in intermediate order creeks. In high order (3rd and 4th) creeks, the density and biomass of D. glabra were higher in creek edge sites than in creek bottom sites, whereas the reverse was true for low order (1st and 2nd) creeks. Secondary production was highest in 2nd order creeks (559.7 mg AFDM m−2 year−1) and was ca. 2 folds higher than in 1st and 4th order creeks. Top fitting AIC models indicated that the secondary production of D. glabra was mainly associated with geomorphological characters including cross-sectional area and bank slope. This suggests that hydrodynamic forces are essential factors influencing secondary production of macrobenthos in salt marshes. This study emphasizes the importance of microhabitat variability when evaluating secondary production and ecosystem functions. PMID:24817092

  2. The influence of cadmium on the antioxidant enzyme activities in polychaete Perinereis aibuhitensis Grube (Annelida: Polychaeta)

    NASA Astrophysics Data System (ADS)

    Yuan, Xiutang; Chen, Aihua; Zhou, Yibing; Liu, Haiying; Yang, Dazuo

    2010-07-01

    The infaunal polychaete Perinereis aibuhitensis Grube, distributed widely along Asian coasts and estuaries, is considered a useful animal model in ecotoxicological tests and a promising candidate in biomonitoring programs. This paper deals with the activities of antioxidant enzymes including superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidases (GSH-Px) in infaunal polychaete P. aibuhitensis exposed to a series of sublethal water-bound cadmium (Cd) concentrations (0, 0.34, 1.72, 3.44, 6.89, and 17.22 mg L-1) under a short-term exposure (1-8 d). The results indicate that the SOD and GSH-Px activities in P. aibuhitensis are stimulated first and then renewed to the original level. The CAT activity of worms decreases at an earlier exposure time but increases to the control values at a later exposure time. Our study suggests that Cd can interfere with the antioxidant defense system of P. aibuhitensis. However, the changes in antioxidant enzyme activities for this species do not show the best promise as biomarkers in Cd biomonitoring of estuarine and coastal zones because weak or non-dose-effect relationships between the antioxidant enzymes activities and Cd levels are found.

  3. Quantitative assessment of Hox complex expression in the indirect development of the polychaete annelid Chaetopterus sp

    NASA Technical Reports Server (NTRS)

    Peterson, K. J.; Irvine, S. Q.; Cameron, R. A.; Davidson, E. H.

    2000-01-01

    A prediction from the set-aside theory of bilaterian origins is that pattern formation processes such as those controlled by the Hox cluster genes are required specifically for adult body plan formation. This prediction can be tested in animals that use maximal indirect development, in which the embryonic formation of the larva and the postembryonic formation of the adult body plan are temporally and spatially distinct. To this end, we quantitatively measured the amount of transcripts for five Hox genes in embryos of a lophotrochozoan, the polychaete annelid Chaetopterus sp. The polychaete Hox complex is shown not to be expressed during embryogenesis, but transcripts of all measured Hox complex genes are detected at significant levels during the initial stages of adult body plan formation. Temporal colinearity in the sequence of their activation is observed, so that activation follows the 3'-5' arrangement of the genes. Moreover, Hox gene expression is spatially localized to the region of teloblastic set-aside cells of the later-stage embryos. This study shows that an indirectly developing lophotrochozoan shares with an indirectly developing deuterostome, the sea urchin, a common mode of Hox complex utilization: construction of the larva, whether a trochophore or dipleurula, does not involve Hox cluster expression, but in both forms the complex is expressed in the set-aside cells from which the adult body plan derives.

  4. MidMedPol: Polychaetes from midlittoral rocky shores in Greece and Italy (Mediterranean Sea)

    PubMed Central

    2013-01-01

    Abstract This paper describes a dataset of polychaetes (Annelida) from 14 midlittoral rocky shore sampling sites in Greece and Italy (Mediterranean Sea). The dataset combines the outcome of four different projects studying the hard substrate midlittoral zone in the Mediterranean between 1984 and 2009. Samples were collected by scraping and collecting the organisms from a framed area. The maximal sampling depth was 1.5 m. In total, 123 polychaete species were recorded, five of which are new records for the respective biogeographic sectors of the Mediterranean. The dataset contains 788 occurrence records, fully annotated with all required metadata. These data contribute to the knowledge of a previously very understudied regional habitat, since at present, comprehensive lists of the midlittoral communities in the Mediterranean are provided through only a few, paper-based, studies. This dataset is one of the first electronic data compilations of the Mediterranean midlittoral zone communities and certainly the most comprehensive of its kind, contributing to the ongoing efforts of the Ocean Biogeographic Information System (OBIS) which aims at filling the gaps in our current knowledge of the world's oceans. It is accessible at http://ipt.vliz.be/resource.do?r=mediterraneanpolychaetaintertidal. PMID:24723761

  5. Large, motile epifauna interact strongly with harpacticoid copepods and polychaetes at a bathyal site

    NASA Astrophysics Data System (ADS)

    Thistle, David; Eckman, James E.; Paterson, Gordon L. J.

    2008-03-01

    Strengths of interactions among groups of animals in deep-sea-sediment communities are poorly known. Large, motile epifauna (LME) such as sea cucumbers, star fishes, and demersal fishes occur in the deep sea and are sources of predation, disturbance, and habitat alteration and thus have the potential to interact strongly with infauna. At a site off the southwestern coast of the United States (32°57.3'N, 117°32.2'W, 780 m depth), we excluded the LME from five 75- ×75-cm plots with cages. After 143 d, we sampled these plots and five plots of the same size paired with them as controls. Abundances of harpacticoid copepods and polychaetes were significantly lower in cages than in controls. In several cages, nematodes and kinorhynchs were also dramatically less abundant than in paired controls. Results suggest that LME ordinarily affect the infaunal assemblage in such a way that harpacticoids and polychaetes (and perhaps nematodes and kinorhynchs) can maintain higher abundances than they can in the absence of LME, indicating that strong interactions can influence the organization of deep-sea-sediment communities. In a multivariate analysis of environmental parameters, cage and control samples were intermixed, so if the effect is transmitted by alterations of the environment by the LME, the nature of the alterations must be relatively local and remains to be discovered.

  6. Polychaetes associated with the sciaphilic alga community in the northern Aegean Sea: spatial and temporal variability

    NASA Astrophysics Data System (ADS)

    Antoniadou, C.; Nicolaidou, A.; Chintiroglou, C.

    2004-10-01

    Polychaete biodiversity has received little attention despite its importance in biomonitoring. This study describes polychaete diversity, and its spatial and temporal variability in infralittoral, hard substrate assemblages. Seven stations were chosen in the central area of the northern Aegean Sea. At each station, one to three depth levels were set (15, 30 and 40 m). Five replicates were collected by scuba diving with a quadrat sampler (400 cm2) from each station and depth level during summer for the spatial analysis, and seasonally for the study of temporal changes. Common biocoenotic methods were employed (estimation of numerical abundance, mean dominance, frequency, Margalef's richness, Shannon-Weaver index and Pielou's evenness). A total of 5,494 individuals, belonging to 79 species, were counted and classified. Diversity indices were always high. Clustering and multidimensional scaling techniques indicated a high heterogeneity of the stations, although these were all characterized by the sciaphilic alga community. A clear seasonal pattern was not detectable. Summer and autumn samples discriminate, while winter and spring form an even group. The abundance/biomass comparison indicated a dominance of k-strategy patterns, characteristic of stable communities.

  7. Using stable isotopes to investigate individual diet specialization in California sea otters (Enhydra lutris nereis)

    USGS Publications Warehouse

    Newsome, S.D.; Tinker, M.T.; Monson, D.H.; Oftedal, O.T.; Ralls, K.; Staedler, M.M.; Fogel, M.L.; Estes, J.A.

    2009-01-01

    Differences in diet composition among conspecifics (dietary specialization) have been documented across a broad range of taxonomic groups and habitats, and such variation at the individual level is increasingly recognized as an important component of diversity in trophic interactions. Accurate identification of individual dietary specialization, however, requires longitudinal dietary records that are labor-intensive and cost-prohibitive to obtain for many species. Here we explore the use of stable isotopes (??13C and ??15N) as a promising technique for detecting and quantifying patterns of individual dietary specialization. Southern sea otters (Enhydra lutris nereis) offer a unique opportunity for testing this approach because (1) they consume a wide variety of prey that span multiple trophic levels, habitats, and ecologically defined functional groups: and (2) individual diet specialization can be validated with existing observational data. We analyzed the isotopic composition of sea otter vibrissae (n = 31) in order to characterize inter- and intra-individual variation in sea otter diets at Monterey Bay, California, USA. At the population level, sea otters showed substantial variation in both ??13C and ??15N values, occupying nearly all of the "isotopic space" created by the diversity of isotopic signatures of potential prey taxa. Most of the variation in sea otter vibrissae was accounted for by differences between individuals, with much less contributed by within-individual variation. A majority of sea otters (???80%) showed relatively little temporal variability in isotopic composition, suggesting that the proportional composition of most individuals' diets is relatively constant over time; a few individuals (???20%) exhibited a high degree of intra-vibrissa isotopic variability, suggesting seasonal shifts in diet composition. These results and our interpretation of them were supported by long-term observational data on the diets of radio-tagged sea otters from

  8. THE EFFECTS OF SALINITY CHANGE ON THE FREE AMINO ACID POOLS OF TWO NEREID POLYCHAETES, 'NEANTHES SUCCINEA' AND 'LEONEREIS CULVERI'

    EPA Science Inventory

    The response of the free amino acid pools of two nereid polychaetes, Neanthes succinea and Leonereis culveri to both increased and decreased salinities was examined. In both species, glycine and alanine accounted for most of the observed change in the total free amino acid (FAA) ...

  9. Polychaete response to fresh food supply at organically enriched coastal sites: Repercussion on bioturbation potential and trophic structure

    NASA Astrophysics Data System (ADS)

    Venturini, N.; Pires-Vanin, A. M. S.; Salhi, M.; Bessonart, M.; Muniz, P.

    2011-12-01

    We investigated the vertical distribution, abundance, specific and functional structure of polychaete assemblages at four organically enriched sites. The effects of fresh organic matter input from the water column driving by upwelling were evaluated. Temperature and salinity values indicate the intrusion of South Atlantic Central Water (SACW) in spring, a nutrient-rich water mass. The dominance of the conveyor belt transport (CONV) in the station influenced by SACW, in the spring survey, is associated with fresh organic matter input as indicated by higher amounts of polyunsaturated fatty acids. Conversely, the predominance of the diffusive mixing (DIFF) bioturbation category, in the sites without SACW influence is related to the preferential accumulation of more refractive food resources as indicated by higher concentrations of short chain saturated fatty acids. At the site influenced by SACW, the changes in polychaete assemblages were not all evident during proceeding upwelling conditions, but may persist at the end of the upwelling. Polychaetes in the study area seemed to be limited by the quality but not the quantity of food. The delay in polychaete response to fresh food supply may be related to the organic enrichment and the prevalence of refractory material in the sediments.

  10. Biochemical and behavioral responses in the estuarine polychaete Perinereis gualpensis (Nereididae) after in situ exposure to polluted sediments.

    PubMed

    Díaz-Jaramillo, Mauricio; da Rocha, Alessandra Martins; Chiang, Gustavo; Buchwalter, David; Monserrat, José M; Barra, Ricardo

    2013-03-01

    In situ translocation experiments are advantageous relative to traditional laboratory experiments, particularly for understanding the bioavailability of trace metals like mercury (Hg). Individuals of the polychaete Perinereis gualpensis were translocated from a reference site (Raqui estuary, Chile) to an estuarine site with significant sediment Hg concentrations (Lenga estuary: 1.78-9.89 mg/kg). Individuals were exposed in polluted and non-polluted sediments for 21 days and sampled every 7 days with cages deployed at three different depths. Tissue Hg concentrations were measured in conjunction with oxidative stress responses. Translocated polychaetes rapidly accumulated Hg. Glutathione S-transferase (GST) activities measured from posterior body regions were 2-fold higher than control activities after 21 days of exposure. Other antioxidant measures were idiosyncratic. Distinct burrowing behavior differences were observed; control polychaetes exhibited more homogenous vertical distributions, whereas in Lenga, worms tended to remain in upper layers. These studies demonstrate that under natural conditions, Hg is highly bioavailable to polychaetes affecting both biochemical and behavioral responses after relatively short-term exposure. PMID:23273620

  11. The effects of salinity changes on the Polychaete Diopatra neapolitana: Impacts on regenerative capacity and biochemical markers.

    PubMed

    Freitas, Rosa; Pires, Adília; Velez, Cátia; Almeida, Ângela; Wrona, Frederick J; Soares, Amadeu M V M; Figueira, Etelvina

    2015-06-01

    Polychaetes have been identified by several authors as a group of marine invertebrates that respond rapidly to anthropogenic stressors. However, studies investigating alterations in Polychaetes affected by climate changes are scarce. Thus, the present study aimed to assess the impact of salinity changes (14, 21, 28, 35, 42g/L) on the physiological and biochemical performance of the Polychaete Diopatra neapolitana, evaluating the species regenerative ability and biochemical alterations. The results obtained demonstrated that organisms exposed to extreme salinity conditions (14, 21 and 42g/L) presented higher mortality rates, needed more days to completely regenerate the missing body region and also regenerated less chaetigers, when compared to organisms exposed to salinities 28 and 35g/L. The present study further demonstrated that D. neapolitana presented significantly lower glycogen and protein content at salinities 21 and 42g/L, which can be explained by higher energy expenditure in the physiological and biochemical processes. A marked impairment of the glutathione redox status was also recorded at salinities 21 and 42g/L. Increased antioxidant enzyme activities were observed at salinity 21g/L while LPO levels were increased at salinity 42g/L. Overall the present study demonstrated that the regenerative capacity of D. neapolitana can be used as a tool to assess environmental changes, namely salinity shifts. Moreover, stress related biomarkers revealed to be useful to evaluate the alterations in Polychaetes due to salinity changes. D. neapolitana revealed to be a good bioindicator to salinity alterations. PMID:25911382

  12. Reversion to virulence and efficacy of an attenuated canarypox vaccine in Hawai'i 'Amakihi (Hemignathus Virens)

    USGS Publications Warehouse

    Atkinson, Carter T.; Wiegand, Kimberly C.; Triglia, Dennis; Jarvi, Susan I.

    2012-01-01

    Vaccines may be effective tools for protecting small populations of highly susceptible endangered, captive-reared, or translocated Hawaiian honeycreepers from introduced Avipoxvirus, but their efficacy has not been evaluated. An attenuated Canarypox vaccine that is genetically similar to one of two passerine Avipoxvirus isolates from Hawai‘i and distinct from Fowlpox was tested to evaluate whether Hawai‘i ‘Amakihi (Hemignathus virens) can be protected from wild isolates of Avipoxvirus from the Hawaiian Islands. Thirty-one (31) Hawai‘i ‘Amakihi were collected from high-elevation habitats on Mauna Kea Volcano, where pox transmission is rare, and randomly divided into two groups. One group was vaccinated with Poximune C®, whereas the other group received a sham vaccination with sterile water. Four of 15 (27%) vaccinated birds developed life-threatening disseminated lesions or lesions of unusually long duration, whereas one bird never developed a vaccine-associated lesion or “take.” After vaccine lesions healed, vaccinated birds were randomly divided into three groups of five and challenged with either a wild isolate of Fowlpox (FP) from Hawai‘i, a Hawai‘i ‘Amakihi isolate of a Canarypox-like virus (PV1), or a Hawai‘i ‘Amakihi isolate of a related, but distinct, passerine Avipoxvirus (PV2). Similarly, three random groups of five unvaccinated ‘Amakihi were challenged with the same virus isolates. Vaccinated and unvaccinated ‘Amakihi challenged with FP had transient infections with no clinical signs of infection. Mortality in vaccinated ‘Amakihi challenged with PV1 and PV2 ranged from 0% (0/5) for PV1 to 60% (3/5) for PV2. Mortality in unvaccinated ‘Amakihi ranged from 40% (2/5) for PV1 to 100% (5/5) for PV2. Although the vaccine provided some protection against PV1, both potential for vaccine reversion and low efficacy against PV2 preclude its use in captive or wild honeycreepers.

  13. An ultrastructural study of oogenesis in the polychaete Nephtys hombergi Savigny

    NASA Astrophysics Data System (ADS)

    Bentley, M. G.

    1989-06-01

    The polychaete Nephtys hombergi has an annual cycle of reproduction. Ovaries were fixed for electron microscopy during the gametogenic phase from September to March, and during the breeding and post-breeding periol. Oogenesis takes place entirely within the ovary, the integrity of which is maintained by a network of simple follicle cells. Previtellogenic oocytes have close contacts with the peri-vasal cells which surround the genital blood capillaries. These contacts are lost as the oocytes enter vitellogenesis. The vitellogenic oocytes have a cytology typical of oocytes which are thought to undergo autosynthetic production of protein yolk. Biochemical studies would be required to establish whether heterosynthesis of yolk also occurs. As the oocytes proceed through vitellogenesis, cortical material is laid down near the periphery of the oocyte and a microvillous surface is developed. When the microvillous surface is complete the oocytes, by then hormone independent, are ovulated from the ovary and are ready to be spawned.

  14. Characterization of an anthraquinone fluor from the bioluminescent, pelagic polychaete Tomopteris.

    PubMed

    Francis, Warren R; Powers, Meghan L; Haddock, Steven H D

    2014-12-01

    Tomopteris is a cosmopolitan genus of polychaetes. Many species produce yellow luminescence in the parapodia when stimulated. Yellow bioluminescence is rare in the ocean, and the components of this luminescent reaction have not been identified. Only a brief description, half a century ago, noted fluorescence in the parapodia with a remarkably similar spectrum to the bioluminescence, which suggested that it may be the luciferin or terminal light-emitter. Here, we report the isolation of the fluorescent yellow-orange pigment found in the luminous exudate and in the body of the animals. Liquid chromatography-mass spectrometry revealed the mass to be 270 m/z with a molecular formula of C(15)H(10)O(5), which ultimately was shown to be aloe-emodin, an anthraquinone previously found in plants. We speculate that aloe-emodin could be a factor for resonant-energy transfer or the oxyluciferin for Tomopteris bioluminescence. PMID:24760626

  15. Shorebird diet and size selection of nereid polychaetes in South Carolina coastal diked wetlands

    USGS Publications Warehouse

    Weber, Louise M.; Haig, Susan M.

    1997-01-01

    Coastal wetlands that are diked and managed may supplement declining natural habitat for migrating shorebirds (Charadriiformes). However, data on shorebird diet in these diked wetlands are scarce. We examined shorebird diet and prey size selection in brackish diked wetlands at the Yawkey Center on South Island, South Carolina, USA. Gut contents of seven Lesser Yellowlegs (Tringa flavipes) and seven Short-billed Dowitchers (Limnodromus griseus) were examined. The most common items in gut contents were mandibles of the nereid polychaete, Laeonereis culveri, followed by insects. L. culveri eaten by Short-billed Dowitchers were significantly larger than those eaten by Lesser Yellowlegs. This difference may be related to differences in bill length and feeding tactics. We make suggestions on how to maintain high numbers of L. culveri in diked wetlands, but more research on the timing of colonization by invertebrates is needed in shorebird conservation efforts.

  16. The effects of carbamazepine on macroinvertebrate species: Comparing bivalves and polychaetes biochemical responses.

    PubMed

    Freitas, Rosa; Almeida, Ângela; Pires, Adília; Velez, Cátia; Calisto, Vânia; Schneider, Rudolf J; Esteves, Valdemar I; Wrona, Frederick J; Figueira, Etelvina; Soares, Amadeu M V M

    2015-11-15

    In the present study, the bivalve Scrobicularia plana and the polychaete Diopatra neapolitana were exposed to an increasing carbamazepine (CBZ) concentration gradient. Both species are among the most widely used bioindicators, and CBZ is one of the most commonly found drugs in the aquatic environment. After a chronic exposure (28 days), the results obtained revealed that CBZ induced biochemical alterations in both species. Our findings demonstrated that S. plana and D. neapolitana reduced the CBZ accumulation rate at higher CBZ concentrations, probably due to their capacity to decrease their feeding rates at stressful conditions. Nevertheless, this defence mechanism was not enough to prevent both species from oxidative stress. In fact, S. plana and D. neapolitana were not able to efficiently activate their antioxidant defence mechanisms which resulted in the increase of lipid peroxidation, especially at the highest CBZ concentrations. Comparing both species, it seems that S. plana was the most sensitive species since stronger biochemical alterations were observed in this species. PMID:26312440

  17. Digestive determinants of benzo[a]pyrene and phenanthrene bioaccumulation by a deposit-feeding polychaete

    SciTech Connect

    Penry, D.L.; Weston, D.P.

    1998-11-01

    The uptake of hydrophobic contaminants from ingested sediment can contribute significantly to body burdens of deposit feeders, and feeding behavior and digestive physiology can play important roles in bioaccumulation. The authors examined the uptake of polycyclic aromatic hydrocarbons (PAHs) by the deposit-feeding polychaete Abarenicola pacifica in experiments in which worms were first acclimated to low or high organic carbon sediments with 0.08 or 0.45% total organic carbon, respectively and then transferred to low or high organic carbon test sediments contaminated with radiolabeled phenanthrene or benzo[a]pyrene. Ingestion rate was measurements are essential in many types of bioaccumulation studies because differences in ingestion rates between sediment types may confound some traditional measures of bioavailability. Physiological acclimation to the low or high organic carbon sediments did not appear to affect PAH uptake from the test sediments, but acclimation did affect biotransformation capabilities, particularly for phenanthrene.

  18. Chronic effects of organochlorine exposure in sediment to the marine polychaete Neanthes arenaceodentata

    SciTech Connect

    Murdoch, M.H.; Chapman, P.M.; Johns, D.M.; Paine, M.D.

    1997-07-01

    Organisms exposed to organochlorinated compounds in sediments are likely to suffer chronic rather than acute effects. Thus, acute toxicity tests are unlikely to truly assess their potential impact. A 120-d toxicity test was designed to assess the impact of polychlorinated biphenyl on the marine polychaete Neanthes arenacedodentata. A two-tiered approach was used: Tier 1 involved reference sediment spiked with a range of concentrations of the organochlorine bracketing the concentrations found in natural sediments, and tier 2 involved field sediments collected from a coastal area contaminated with high concentrations of the same organochlorine. Testing measured a number of endpoints, including survival, growth, and reproduction. Survival and growth were unaffected in either tier by any of the test sediments. Reproductive endpoints, however, were depressed in both tiers relative to the reference sediment.

  19. Polychaetes of the genus Ampharete (Polychaeta: Ampharetidae) collected in Icelandic waters during the BIOICE project

    NASA Astrophysics Data System (ADS)

    Parapar, Julio; Helgason, Gudmundur V.; Jirkov, Igor; Moreira, Juan

    2012-09-01

    Based on material collected during the BIOICE project off Iceland, the taxonomy and distribution of eight species of polychaetous annelids belonging to the genus Ampharete (Polychaeta: Ampharetidae) are reviewed. Five of these species were previously reported in the area: Ampharete acutifrons, Ampharete borealis, Ampharete finmarchica, Ampharete octocirrata and Ampharete petersenae; two are new to Icelandic waters: Ampharete baltica and Ampharete lindstroemi; and one is new to science: Ampharete villenai sp. nov. A. petersenae was found for the first time after the original description and is redescribed. A. villenai sp. nov. is primarily characterized by the size, shape and disposition of the paleae, a special kind of chaetae located on the first body chaetiger. Several body characters of high taxonomic relevance in Ampharetidae are reviewed under the SEM. The distribution of each species off the coast of Iceland and a key to all species recorded in European Boreo-Arctic waters is provided.

  20. A novel methodology for the determination of biomarker baseline levels in the marine polychaete Hediste diversicolor.

    PubMed

    Barrick, A; Châtel, A; Marion, J-M; Perrein-Ettajani, H; Bruneau, M; Mouneyrac, C

    2016-07-15

    Identifying environmental damage due to anthropogenic activities is a focal point for scientists and policy makers like those involved in the European Water Framework Directive (WFD). Many of these approaches focus on ecological endpoints for assessing environmental perturbations, which lead to policies emphasizing mitigation rather than prevention. Biomarkers provide early-warning indicators of stress but it is necessary to distinguish their natural variations from those induced by chemical stress. The global aim of this study was to establish a baseline assessment criterion (BAC) using historical data in a reference site to define toxicity thresholds. We have developed a multiple polynomial regression model (MPR) accounting the influence of salinity, temperature and size of individual on energetic reserves (glycogen and lipids) in the marine polychaete Hediste diversicolor. The model identified a complex, orthogonal relationship between confounding factors and glycogen and a linear relationship between lipids and size of individuals. PMID:27184131

  1. Phosphoproteome analysis during larval development and metamorphosis in the spionid polychaete Pseudopolydora vexillosa

    PubMed Central

    2011-01-01

    Background The metamorphosis of the spionid polychaete Pseudopolydora vexillosa includes spontaneous settlement onto soft-bottom habitats and morphogenesis that can be completed in a very short time. A previous study on the total changes to the proteome during the various developmental stages of P. vexillosa suggested that little or no de novo protein synthesis occurs during metamorphosis. In this study, we used multicolor fluorescence detection of proteins in 2-D gels for differential analysis of proteins and phosphoproteins to reveal the dynamics of post-translational modification proteins in this species. A combination of affinity chromatography, 2D-PAGE, and mass spectrometry was used to identify the phosphoproteins in pre-competent larvae, competent larvae, and newly metamorphosed juveniles. Results We reproducibly detected 210, 492, and 172 phosphoproteins in pre-competent larvae, competent larvae, and newly metamorphosed juveniles, respectively. The highest percentage of phosphorylation was observed during the competent larval stage. About 64 stage-specific phosphoprotein spots were detected in the competent stage, and 32 phosphoproteins were found to be significantly differentially expressed in the three stages. We identified 38 phosphoproteins, 10 of which were differentially expressed during metamorphosis. These phosphoproteins belonged to six categories of biological processes: (1) development, (2) cell differentiation and integrity, (3) transcription and translation, (4) metabolism, (5) protein-protein interaction and proteolysis, and (6) receptors and enzymes. Conclusion This is the first study to report changes in phosphoprotein expression patterns during the metamorphosis of the marine polychaete P. vexillosa. The higher degree of phosphorylation during the process of attaining competence to settle and metamorphose may be due to fast morphological transitions regulated by various mechanisms. Our data are consistent with previous studies showing a

  2. Polychaete Richness and Abundance Enhanced in Anthropogenically Modified Estuaries Despite High Concentrations of Toxic Contaminants

    PubMed Central

    Dafforn, Katherine A.; Kelaher, Brendan P.; Simpson, Stuart L.; Coleman, Melinda A.; Hutchings, Pat A.; Clark, Graeme F.; Knott, Nathan A.; Doblin, Martina A.; Johnston, Emma L.

    2013-01-01

    Ecological communities are increasingly exposed to multiple chemical and physical stressors, but distinguishing anthropogenic impacts from other environmental drivers remains challenging. Rarely are multiple stressors investigated in replicated studies over large spatial scales (>1000 kms) or supported with manipulations that are necessary to interpret ecological patterns. We measured the composition of sediment infaunal communities in relation to anthropogenic and natural stressors at multiple sites within seven estuaries. We observed increases in the richness and abundance of polychaete worms in heavily modified estuaries with severe metal contamination, but no changes in the diversity or abundance of other taxa. Estuaries in which toxic contaminants were elevated also showed evidence of organic enrichment. We hypothesised that the observed response of polychaetes was not a ‘positive’ response to toxic contamination or a reduction in biotic competition, but due to high levels of nutrients in heavily modified estuaries driving productivity in the water column and enriching the sediment over large spatial scales. We deployed defaunated field-collected sediments from the surveyed estuaries in a small scale experiment, but observed no effects of sediment characteristics (toxic or enriching). Furthermore, invertebrate recruitment instead reflected the low diversity and abundance observed during field surveys of this relatively ‘pristine’ estuary. This suggests that differences observed in the survey are not a direct consequence of sediment characteristics (even severe metal contamination) but are related to parameters that covary with estuary modification such as enhanced productivity from nutrient inputs and the diversity of the local species pool. This has implications for the interpretation of diversity measures in large-scale monitoring studies in which the observed patterns may be strongly influenced by many factors that covary with anthropogenic

  3. Textures and traction: how tube-dwelling polychaetes get a leg up

    PubMed Central

    Merz, Rachel Ann

    2015-01-01

    By controlling the traction between its body and the tube wall, a tube-dwelling polychaete can move efficiently from one end of its tube to the other, brace its body during normal functions (e.g., ventilation and feeding), and anchor within its tube avoiding removal by predators. To examine the potential physical interaction between worms and the tubes they live in, scanning electron microscopy was used to reveal and quantify the morphology of worm bodies and the tubes they produce for species representing 13 families of tube-dwelling polychaetes. In the tubes of most species there were macroscopic or nearly macroscopic (∼10 μm–1 mm) bumps or ridges that protruded slightly into the lumen of the tube; these could provide purchase as a worm moves or anchors. At this scale (∼10 μm-1 mm), the surfaces of the chaetal heads that interact with the tube wall were typically small enough to fit within spaces between these bumps (created by the inward projection of exogenous materials incorporated into the tube wall) or ridges (made by secretions on the interior surface of the tube). At a finer scale (0.01–10 μm), there was a second overlap in size, usually between the dentition on the surfaces of chaetae that interact with the tube walls and the texture provided by the secreted strands or microscopic inclusions of the inner linings. These linings had a surprising diversity of micro-textures. The most common micro-texture was a “fabric” of secreted threads, but there were also orderly micro-ridges, wrinkles, and rugose surfaces provided by microorganisms incorporated into the inner tube lining. Understanding the fine structures of tubes in conjunction with the morphologies of the worms that build them gives insight into how tubes are constructed and how worms live within them. PMID:25834379

  4. Resistance of polychaete species and trait patterns to simulated species loss in coastal lagoons

    NASA Astrophysics Data System (ADS)

    Faulwetter, Sarah; Papageorgiou, Nafsika; Koulouri, Panayota; Fanini, Lucia; Chatzinikolaou, Eva; Markantonatou, Vasiliki; Pavloudi, Christina; Chatzigeorgiou, Georgios; Keklikoglou, Kleoniki; Vasileiadou, Katerina; Basset, Alberto; Pinna, Maurizio; Rosati, Ilaria; Reizopoulou, Sofia; Nicolaidou, Artemis; Arvanitidis, Christos

    2015-04-01

    The loss of species is known to have negative impacts on the integrity of ecosystems, but the details of this relationship are still far from being fully understood. This study investigates how the distribution patterns of polychaete species and their associated biological trait patterns in six Mediterranean coastal lagoons change under computationally simulated scenarios of random species loss. Species were progressively removed from the full polychaete assemblage and the similarity between the full assemblage and the reduced matrices of both species and trait patterns was calculated. The results indicate the magnitude of changes that might follow species loss in the real world, and allow consideration of the resistance of the system's functional capacity to loss of species, expressed through the species' biological traits as an approximation to functioning. Comparisons were made between the changes in the distribution of species and of traits, as well as between the six different lagoons. While the change of species and trait patterns was strongly correlated within most lagoons, different lagoons showed distinctly different patterns. In disturbed lagoons, the dominance of one or few species was the major driver for the observed patterns and the loss of these species caused extreme changes. Less disturbed lagoons were less susceptible to extreme changes and had a greater resistance towards species loss. Species richness appears to be less important for the ability of the lagoons to buffer changes, instead the initial composition of the assemblage and the identity of the lost species determine the response of the system and our ability to predict changes of the assemblage's functional potential.

  5. Can seamounts provide a good habitat for polychaete annelids? Example of the northeastern Atlantic seamounts

    NASA Astrophysics Data System (ADS)

    Surugiu, Victor; Dauvin, Jean-Claude; Gillet, Patrick; Ruellet, Thierry

    2008-11-01

    Two seamount groups in the northeastern Atlantic were investigated during the 1980s and 1990s: the first was located along the Iberian and African coasts (Galicia, to the north of Portugal; and the Ampere, Gorringe, Josephine and Seine banks near the Madeira-Canary Islands) and the second was located offshore of the southern part of the Azores Islands, included the Atlantis, Hyeres, Irving, Meteor and Plato banks. Among the invertebrates, Annelida, specifically Polychaeta, were studied as surrogates for the biogeographical relationship between coastal and mid-oceanic seamounts in the northeastern Atlantic and the fauna in these areas. The dominant families were Onuphidae (27.46%), Syllidae (18.23%), Eunicidae (15.65%), Amphinomidae (11.45%) and Nereididae (5.61%), representing 78.4% of the total fauna. Data analyses clearly distinguished two seamount groups, one for coastal seamounts and the other offshore. Although the species distinguished and the family composition at the sampled sites were different (i.e., most diversified at the Josephine site and most impoverished at the Irving site), no coastal/offshore faunal impoverishment gradient could be identified. Thus, it seems that seamount environments do not favour any relationship between planktotrophic development and the direct development of polychaetes. Though the number of apparent endemic species was low (<7%), it remained in keeping with other invertebrate groups. Still, while seamounts may well encourage oceanic biodiversity in some zoological groups, this was clearly not the case for the polychaetes. We offer two explanations for this paradox: pelagic productivity and local environmental conditions.

  6. Diversity of Cultivated Fungi Associated with Conventional and Transgenic Sugarcane and the Interaction between Endophytic Trichoderma virens and the Host Plant.

    PubMed

    Romão-Dumaresq, Aline Silva; Dourado, Manuella Nóbrega; Fávaro, Léia Cecilia de Lima; Mendes, Rodrigo; Ferreira, Anderson; Araújo, Welington Luiz

    2016-01-01

    Plant-associated fungi are considered a vast source for biotechnological processes whose potential has been poorly explored. The interactions and diversity of sugarcane, one of the most important crops in Brazil, have been rarely studied, mainly concerning fungal communities and their interactions with transgenic plants. Taking this into consideration, the purpose of this study was, based on culture dependent strategy, to determine the structure and diversity of the fungal community (root endophytes and rhizosphere) associated with two varieties of sugarcane, a non-genetically modified (SP80-1842) variety and its genetically modified counterpart (IMI-1, expressing imazapyr herbicide resistance). For this, the sugarcane varieties were evaluated in three sampling times (3, 10 and 17 months after planting) under two crop management (weeding and herbicide treatments). In addition, a strain of Trichoderma virens, an endophyte isolated from sugarcane with great potential as a biological control, growth promotion and enzyme production agent, was selected for the fungal-plant interaction assays. The results of the isolation, characterization and evaluation of fungal community changes showed that the sugarcane fungal community is composed of at least 35 different genera, mostly in the phylum Ascomycota. Many genera are observed at very low frequencies among a few most abundant genera, some of which were isolated from specific plant sites (e.g., the roots or the rhizosphere). An assessment of the possible effects upon the fungal community showed that the plant growth stage was the only factor that significantly affected the community's structure. Moreover, if transgenic effects are present, they may be minor compared to other natural sources of variation. The results of interaction studies using the Green fluorescent protein (GFP)-expressing T. virens strain T.v.223 revealed that this fungus did not promote any phenotypic changes in the host plant and was found mostly in the

  7. Diversity of Cultivated Fungi Associated with Conventional and Transgenic Sugarcane and the Interaction between Endophytic Trichoderma virens and the Host Plant

    PubMed Central

    Romão-Dumaresq, Aline Silva; Dourado, Manuella Nóbrega; Fávaro, Léia Cecilia de Lima; Mendes, Rodrigo; Ferreira, Anderson; Araújo, Welington Luiz

    2016-01-01

    Plant-associated fungi are considered a vast source for biotechnological processes whose potential has been poorly explored. The interactions and diversity of sugarcane, one of the most important crops in Brazil, have been rarely studied, mainly concerning fungal communities and their interactions with transgenic plants. Taking this into consideration, the purpose of this study was, based on culture dependent strategy, to determine the structure and diversity of the fungal community (root endophytes and rhizosphere) associated with two varieties of sugarcane, a non-genetically modified (SP80-1842) variety and its genetically modified counterpart (IMI-1, expressing imazapyr herbicide resistance). For this, the sugarcane varieties were evaluated in three sampling times (3, 10 and 17 months after planting) under two crop management (weeding and herbicide treatments). In addition, a strain of Trichoderma virens, an endophyte isolated from sugarcane with great potential as a biological control, growth promotion and enzyme production agent, was selected for the fungal-plant interaction assays. The results of the isolation, characterization and evaluation of fungal community changes showed that the sugarcane fungal community is composed of at least 35 different genera, mostly in the phylum Ascomycota. Many genera are observed at very low frequencies among a few most abundant genera, some of which were isolated from specific plant sites (e.g., the roots or the rhizosphere). An assessment of the possible effects upon the fungal community showed that the plant growth stage was the only factor that significantly affected the community’s structure. Moreover, if transgenic effects are present, they may be minor compared to other natural sources of variation. The results of interaction studies using the Green fluorescent protein (GFP)-expressing T. virens strain T.v.223 revealed that this fungus did not promote any phenotypic changes in the host plant and was found mostly in

  8. Toxicity, bioaccumulation, and biotransformation of silver nanoparticles in marine organisms.

    PubMed

    Wang, Huanhua; Ho, Kay T; Scheckel, Kirk G; Wu, Fengchang; Cantwell, Mark G; Katz, David R; Horowitz, Doranne Borsay; Boothman, Warren S; Burgess, Robert M

    2014-12-01

    The toxicity, bioaccumulation, and biotransformation of citrate and polyvinylpyrrolidone (PVP) coated silver nanoparticles (NPs) (AgNP-citrate and AgNP-PVP) in marine organisms via marine sediment exposure was investigated. Results from 7-d sediment toxicity tests indicate that AgNP-citrate and AgNP-PVP did not exhibit toxicity to the amphipod (Ampelisca abdita) and mysid (Americamysis bahia) at ≤75 mg/kg dry wt. A 28-d bioaccumulation study showed that Ag was significantly accumulated in the marine polychaete Nereis virens (N. virens) in the AgNP-citrate, AgNP-PVP and a conventional salt (AgNO3) treatments. Synchrotron X-ray absorption spectroscopy (XAS) results showed the distribution of Ag species in marine sediments amended with AgNP-citrate, AgNP-PVP, and AgNO3 was AgCl (50–65%) > Ag2S (32–42%) > Ag metal (Ag0) (3–11%). In N virens, AgCl (25–59%) and Ag2S (10–31%) generally decreased and, Ag metal (32–44%) increased, relative to the sediments. The patterns of speciation in the worm were different depending upon the coating of the AgNP and both types of AgNPs were different than the AgNO3 salt. These results show that the AgNP surface capping agents influenced Ag uptake, biotransformation, and/or excretion. To our knowledge, this is the first demonstration of the bioaccumulation and speciation of AgNPs in a marine organism (N. virens). PMID:25369427

  9. Expression of an endochitinase gene from Trichoderma virens confers enhanced tolerance to Alternaria blight in transgenic Brassica juncea (L.) czern and coss lines.

    PubMed

    Kamble, Suchita; Mukherjee, Prasun K; Eapen, Susan

    2016-01-01

    An endochitinase gene 'ech42' from the biocontrol fungus 'Trichoderma virens' was introduced to Brassica juncea (L). Czern and Coss via Agrobaterium tumefaciens mediated genetic transformation method. Integration and expression of the 'ech42' gene in transgenic lines were confirmed by PCR, RT-PCR and Southern hybridization. Transgenic lines (T1) showed expected 3:1 Mendelian segregation ratio when segregation analysis for inheritance of transgene 'hpt' was carried out. Fluorimetric analysis of transgenic lines (T0 and T1) showed 7 fold higher endochitinase activity than the non-transformed plant. Fluorimetric zymogram showed presence of endochitinase (42 kDa) in crude protein extract of transgenic lines. In detached leaf bioassay with fungi Alternaria brassicae and Alternaria brassicicola, transgenic lines (T0 and T1) showed delayed onset of lesions as well as 30-73 % reduction in infected leaf area compared to non-transformed plant. PMID:27186020

  10. ACCUMULATION OF POLYCHLORINATED ORGANIC CONTAMINANTS FROM SEDIMENT BY THREE BENTHIC MARINE SPECIES

    EPA Science Inventory

    A laboratory experiment was conducted to measure the accumulation of selected polychlorinated compounds by marine benthos exposed to environmentally contaminated sediment. andworms (Nereis virens), clams (Macoma nasuta), and grass shrimp (Palaemonetes pugio) were exposed to sedim...

  11. Spatio-temporal changes in trophic categories of infaunal polychaetes near the four wastewater ocean outfalls on Oahu, Hawaii.

    PubMed

    Shuai, Xiufu; Bailey-Brock, Julie H; Lin, David T

    2014-07-01

    This study examines the effect of sewage discharge on benthic polychaete assemblages in the context of their functional trophic categories. We present data spanning 20 years of monitoring benthic invertebrate assemblages and sediment properties at all 4 primary- and secondary-treatment wastewater outfalls servicing Honolulu and the island of Oahu, Hawaii, USA. Samples collected within mandated zones of initial dilution (ZIDs) near outfall discharge sites were compared to samples collected at reference stations at varying distances away. Our findings indicate that sediment properties were not affected by the outfall discharge rate or distance from each ZID. The number of polychaete species in 4 functional trophic categories (carnivore, detritivore, omnivore, and suspension feeder) did not change with the outfall solid loading rate or with distance from each ZID, thus suggesting relatively little organic enrichment. We find no evidence of heavy organic enrichment beyond the designated ZIDs at these 4 wastewater outfalls. PMID:24735911

  12. Pyruvate Oxidoreductases Involved in Glycolytic Anaerobic Metabolism of Polychaetes from the Continental Shelf off Central-South Chile

    NASA Astrophysics Data System (ADS)

    González, R. R.; Quiñones, R. A.

    2000-10-01

    The presence of low oxygen conditions in extensive areas of the continental shelf off central-south Chile has important effects on the biochemical adaptations of the organisms living in this ecosystem. Polychaetes assemblages cohabit on the shelf with an extensively distributed prokaryotic community made up of giant filamentous sulfur bacteria (mainly Thioploca sp.). The aim of this research was to characterize the pyruvate oxidoreductases enzymes involved in the biochemical adaptation of these benthic polychaetes. Nine polychaete species ( Paraprionospio pinnata, Nephtys ferruginea, Glycera americana, Haploscoloplos sp., Lumbrineris composita, Sigambra bassi, Aricidea pigmentata , Cossura chilensis, and Pectinaria chilensis) were assayed for lactic dehydrogenase (LDH), octopine dehydrogenase (OPDH), strombine dehydrogenase (STRDH) and alanopine dehydrogenase (ALPDH). Each species had a characteristic number of the pyruvate oxidoreductases assayed ranging from 4 in Paraprionospio pinnata to 1 in Pectinaria chilensis . The pyruvate saturation curves obtained for the enzymes from all species analysed, except L. composita, suggest that NADH can be oxidized at different rates depending on the amino acid used in the reaction with pyruvate. Our results indicate that organisms having more that one pyruvate oxidoreductase present a greater metabolic capacity to cope with functional and environmental hypoxia because these enzymes would better regulate the pyruvate consumption rate during the transition period. Thus, the dominance of Paraprionospio pinnata in the study area and its worldwide distribution is consistent with its higher number of pyruvate oxidoreductases with different pyruvate consumption rates involved in anaerobic metabolism. Finally, a positive allometric relationship was found between body size and the specific activity of ALPDH, STRDH, and maximum pyruvate oxidoreductase specific activity. This latter result suggests a positive scaling of the specific

  13. Antioxidant capacity of polychaetes occurring at a natural CO2 vent system: Results of an in situ reciprocal transplant experiment.

    PubMed

    Ricevuto, E; Benedetti, M; Regoli, F; Spicer, J I; Gambi, M C

    2015-12-01

    Ocean acidification (OA) is occurring at a fast rate, resulting in changes of carbonate chemistry in the oceans and in lowering of the pH. Previous studies have documented significant changes in the antioxidant defenses of marine species in response to OA. Here, selected polychaete species, Platynereis dumerilii, Polyophthalmus pictus and Syllis prolifera, were sampled from a natural CO2 vent system (pH = 7.3) and from a non-venting 'control' site (pH = 8.1), and reciprocally transplanted in these areas for 30 days. Total antioxidant capacity toward different forms of oxyradicals was compared in native and transplanted polychaetes: the aim was to assess whether the environmental conditions at the vent site would act as a prooxidant stressor, and the capability of polychaetes to modulate their antioxidant capacity to counteract a varied oxyradicals formation. None of the investigated species enhanced the antioxidant potential during the experiment. A significant reduction of the capability to neutralize different forms of oxyradicals was observed in P. pictus and, partially, in S. prolifera when transplanted from control to naturally-acidified conditions. On the other hand, populations of P. dumerilii originating from the vent and of S. prolifera from both control and acidified sites, showed higher constitutive antioxidant efficiency toward peroxyl radicals and peroxynitrite, which may allow them to cope with short-term and chronic exposure to higher oxidative pressure without further enhancement of antioxidant defenses. Since low pH - high pCO2 is the greatest environmental difference between the control and the vent sites, we suggest that the pro-oxidant challenge due to such peculiarities may have different biological consequences in different polychaete species. Some appear more susceptible to oxidative effects, while others acquire a long term acclimatization to vent conditions through the enhancement of their basal antioxidant protection. PMID:26392350

  14. Molecular cloning and expression of novel metallothionein (MT) gene in the polychaete Perinereis nuntia exposed to metals.

    PubMed

    Won, Eun-Ji; Rhee, Jae-Sung; Ra, Kongtae; Kim, Kyung-Tae; Au, Doris W T; Shin, Kyung-Hoon; Lee, Jae-Seong

    2011-08-01

    To report a novel metallothionein (MT) gene and evaluate its potency as a biomarker, we clone this MT gene and measured the expression levels in the metal-exposed polychaete Perinereis nuntia. Accumulated metal contents and metallothionein-like proteins (MTLPs), which have been recognized as potential biomarkers, were compared with the relative mRNA expressions of the MT gene of P. nuntia (Pn-MT). In addition, the metal-binding affinity was estimated by recombinant Pn-MT protein. Pn-MT having high cysteine residues with three metal response elements in the promoter region closely clusters with those of other invertebrates. The accumulation patterns of metals were dependent on the exposure times in lead (Pb), cadmium (Cd), and copper (Cu) exposure. Particularly, both MTLP levels and relative mRNA expressions of MT were increased with accumulated metal contents and exposure time in P. nuntia exposed to Pb and Cd. There was no significant modulation of the Pn-MT gene in polychaetes exposed to Zn and As. However, the metal-binding ability of the recombinant Pn-MT protein provides a clear evidence for a high affinity of MT to several metal elements. These results suggest that Pn-MT would play an important role in the detoxification and/or sequestration of specific metals (e.g., Pb and Cd) in P. nuntia and have potential as a molecular biomarker in the monitoring of the marine environment using a polychaete. PMID:22828888

  15. Long-term exposure to caffeine and carbamazepine: Impacts on the regenerative capacity of the polychaete Diopatra neapolitana.

    PubMed

    Pires, Adília; Almeida, Ângela; Correia, Joana; Calisto, Vânia; Schneider, Rudolf J; Esteves, Valdemar I; Soares, Amadeu M V M; Figueira, Etelvina; Freitas, Rosa

    2016-03-01

    The toxicity induced in non-target organisms by pharmaceutical drugs has been the focus of several studies. In the aquatic environment, most of the studies have been devoted to fish and bivalves, while little is known on the impacts induced in polychaetes. The present study evaluated the impacts of carbamazepine and caffeine on the regenerative capacity of Diopatra neapolitana, a polychaete species with high ecological and economic relevance. Under laboratory controlled conditions polychaetes were exposed, during 28 days, to carbamazepine (Ctl-0.0; 0.3; 3.0; 6.0; 9.0 μg/L) and caffeine (Ctl-0.0; 0.5; 3.0; 18.0 μg/L). During the experiment, at days 11, 18, 25, 32, 39 and 46 after amputation, for each specimen, the percentage of the body width regenerated was determined and the number of new segments was counted. The regenerative capacity was assessed considering the number of days needed to achieve full regeneration and the total number of new segments. The obtained results revealed that with the increase of drugs concentrations organisms regenerated less new segments and took longer to completely regenerate. PMID:26745385

  16. Bathymetric patterns of polychaete (Annelida) species richness in the continental shelf of the Gulf of California, Eastern Pacific

    NASA Astrophysics Data System (ADS)

    Hernández-Alcántara, Pablo; Salas-de León, David Alberto; Solís-Weiss, Vivianne; Monreal-Gómez, María Adela

    2014-08-01

    The mid-domain effect was tested to evaluate the bathymetric patterns of the polychaete species richness in the Upper and Lower Gulf of California as a possible hypothesis to explain the species richness gradient, exploring the overlapping of species depth ranges towards the middle continental shelf. The bathymetric gradient of the number of species was estimated with the depth ranges of 554 polychaete species, and the mid-domain effect was tested using a Monte Carlo simulation program at bands of 10 m depth. The Upper (251 species) and Lower (491 species) Gulf regions showed clear differences in their faunal composition (Jaccard similarity index = 0.34); the species richness pattern was characterized by a highly significant presence of polychaetes with short depth ranges (< 10 m). The richness distribution could be described as a cubic polynomial curve, but the maximum values in both Gulf regions (141 and 317 species, respectively for Upper and Lower Gulf regions) are strongly biased to shallow waters (40 m). This is not consistent with the peak of diversity at 60-70 m predicted by the model. The observed patterns cannot be reproduced by the mid-domain effect, suggesting the existence of non-random factors affecting the species richness gradients in the Gulf.

  17. Regulative capacity for eye formation by first quartet micromeres of the polychaete Capitella teleta.

    PubMed

    Yamaguchi, Emi; Dannenberg, Leah C; Amiel, Aldine R; Seaver, Elaine C

    2016-02-01

    The stereotypic cleavage pattern shared by spiralian embryos provides unique opportunities to compare mechanisms of cell fate specification of homologous blastomeres, and can give insights into how changes in fate may have influenced the evolution of novel structures and morphological diversity. The potential of cells to undergo regulation and the timing of cell fate specification were investigated during early development in the polychaete annelid, Capitella teleta. Targeted laser deletions of the first quartet micromeres were performed, with a focus on the eye-forming cells 1a and 1c. Most of the larvae resulting from deletion of the 1a or 1c micromeres lack both the pigment cell and sensory cell of the eye as predicted by the C. teleta fate map. In a minority of cases, however, both left and right larval eye spots develop, suggesting that other blastomeres within the embryo regulate for loss of these cells. Deletion of the 1a and 1c derivatives, 1a(1) or 1c(1), also largely result in larvae with one pigment spot, although there are larvae with two eye spots, suggesting that the ability to regulate for loss of an eye-generating cell persists for an additional cell cycle. Cell deletion in conjunction with intracellular labeling indicates that all four quadrants retain the ability to generate eyes, including those that normally do not. Deletion of all four first quartet micromeres provides evidence that only the first quartet micromeres have eye-forming potential. Additionally, in contrast to the right side of the head where larval and adult eye sensory cells are derived from the same cell (1c), on the left side, the larval and adult eye sensory cells are generated by different embryonic lineages. We hypothesize that cell-cell interactions and cell position are important for regulative ability in Capitella. To our knowledge, this is one of the first detailed deletion studies of the first quartet micromeres and the first convincing example of regulation in

  18. Trace metals partitioning among different sedimentary mineral phases and the deposit-feeding polychaete Armandia brevis.

    PubMed

    Díaz-de-Alba, Margarita; Huerta-Diaz, Miguel Angel; Delgadillo-Hinojosa, Francisco; Hare, Landis; Galindo-Riaño, M Dolores; Siqueiros-Valencia, Arturo

    2016-02-01

    Trace metals (Cd, Co, Cu, Fe, Mn, Ni, Pb, Zn) were determined in two operationally defined fractions (HCl and pyrite) in sediments from Ensenada and El Sauzal harbors (Mexico). The HCl fraction had significantly higher metal concentrations relative to the pyrite fraction in both harbors, underlining the weak tendency of most trace metals to associate with pyrite. Exceptionally, Cu was highly pyritized, with degrees of trace metal pyritization (DTMP) >80% in both harbors. Dissolved Fe flux measurements combined with solid phase Fe sulfide data indicated that 98 mt of Fe are precipitated as iron sulfides every year in Ensenada Harbor. These Fe sulfides (and associated trace metals) will remain preserved in the sediments, unless they are perturbed by dredging or sediment resuspension. Calculations indicate that dredging activities could export to the open ocean 0.20±0.13 to (0.30±0.56)×10(3) mt of Cd and Cu, respectively, creating a potential threat to marine benthic organisms. Degrees of pyritization (DOP) values in Ensenada and El Sauzal harbors were relatively low (<25%) while degrees of sulfidization (DOS) were high (~50%) because of the contribution of acid volatile sulfide. DOP values correlated with DTMP values (p≤0.001), indicating that metals are gradually incorporated into pyrite as this mineral is formed. Significant correlations were also found between DTMP values and -log(Ksp(MeS)/Ksp(pyr)) for both harbors, indicating that incorporation of trace metals into the pyrite phase is a function of the solubility product of the corresponding metal sulfide. The order in which elements were pyritized in both harbors was Zn≈Mnpolychaete), suggesting that these labile sedimentary metals are preferentially accumulated by the polychaete, making it a

  19. Anti-Giardia activity of phenolic-rich essential oils: effects of Thymbra capitata, Origanum virens, Thymus zygis subsp. sylvestris, and Lippia graveolens on trophozoites growth, viability, adherence, and ultrastructure.

    PubMed

    Machado, Marisa; Dinis, Augusto M; Salgueiro, Ligia; Cavaleiro, Carlos; Custódio, José B A; Sousa, Maria do Céu

    2010-04-01

    The present work evaluates the anti-Giardia activity of phenolic-rich essential oils obtained from Thymbra capitata, Origanum virens, Thymus zygis subsp. sylvestris chemotype thymol, and Lippia graveolens aromatic plants. The effects were evaluated on parasite growth, cell viability adherence, and morphology. The tested essential oils inhibited the growth of Giardia lamblia. T. capitata essential oil is the most active followed by O. virens, T. zygis subsp. sylvestris, and L. graveolens oils. The tested essential oils at IC50 (71-257) microg/ml inhibited parasite adherence (p < 0.001) since the first hour of incubation and were able to kill almost 50% of the parasites population in a time-dependent manner. The main ultrastructural alterations promoted by essential oils were deformations in typical trophozoite appearance, often roundly shape, irregular dorsal and ventral surface, presence of membrane blebs, electrodense precipitates in cytoplasm and nuclei, and internalization of flagella and ventral disc. Our data suggest that essential oils induced cell death probably by processes associated to the loss of osmoregulation caused by plasmatic membrane alterations. Experiments revealed that the essential oils did not present cytotoxic effects in mammalian cells. In conclusion, T. capitata, O. virens, T. zygis subsp. sylvestris chemotype thymol, and L. graveolens essential oils have antigiardial activity in vitro and seem to have potential for the treatment of the parasitic disease caused by the protozoan G. lamblia. PMID:20217133

  20. Use of a non-homologous end-joining-deficient strain (delta-ku70) of the biocontrol fungus Trichoderma virens to investigate the function of the laccase gene lcc1 in sclerotia degradation

    PubMed Central

    Catalano, Valentina; Vergara, Mariarosaria; Hauzenberger, Jasmin R.; Seiboth, Bernhard; Sarrocco, Sabrina; Vannacci, Giovanni; Kubicek, Christian P.

    2010-01-01

    The aim of this study was to apply a generated Δtku70 strain with increased homologous recombination efficiency from the mycoparasitic fungus Trichoderma virens for studying the involvement of laccases in the degradation of sclerotia of plant pathogenic fungi. Inactivation of the non-homologous end-joining pathway has become a successful tool in filamentous fungi to overcome poor targeting efficiencies for genetic engineering. Here, we applied this principle to the biocontrol fungus T. virens, strain I10, by deleting its tku70 gene. This strain was subsequently used to delete the laccase gene lcc1, which we found to be expressed after interaction of T. virens with sclerotia of the plant pathogenic fungi Botrytis cinerea and Sclerotinia sclerotiorum. Lcc1 was strongly upregulated at early colonization of B. cinerea sclerotia and steadily induced during colonization of S. sclerotiorum sclerotia. The Δtku70Δlcc1 mutant was altered in its ability to degrade the sclerotia of B. cinerea and S. sclerotiorum. Interestingly, while the decaying ability for B. cinerea sclerotia was significantly decreased, that to degrade S. sclerotiorum sclerotia was even enhanced, suggesting the operation of different mechanisms in the mycoparasitism of these two types of sclerotia by the laccase LCC1. PMID:20872221

  1. Three new species of Laonice (Polychaete: Spionidae) from West and Southwest Africa.

    PubMed

    Sikorski, Andrey; Pavlova, Lyudmila

    2016-01-01

    Three new species of Laonice (Polychaete: Spionidae): L. galatheae, L. cricketae, L. olgae-are described from South and West Africa (along the coast from 31°14.1'S to 04°44'N) based on Danish and South African zoological collections. Arguments relative to the morphological heterogeneity of the genus Laonice are advanced. The arguments are based on the following characters: degree of fusion of prostomium with peristomium at the anterior margin, degree of variability of all numerical characters, arrangement of anterior capillaries in two or more vertical rows, presence or absence of transversal dorsal membranous crests in the "post nuchal organ" and presence of genital pouches only on very limited number of segments or other pattern. Authors think it is obvious today an existence of at least four morphologically separate groups of species inside the Laonice-genus: "L. cirrata", "L. sarsi", "L. appelloefi" and "L. norgensis" groups. Eight species names from 34 valid names in the genus are still with unclear affiliation. L. quadridentata is treated now as a junior synonym of L. brevicornis. An opinion is expressed about L. insolita not belonging to the genus Laonice because of discrepancy the generic diagnosis. PMID:27394551

  2. Burrowing behavior in mud and sand of morphologically divergent polychaete species (Annelida: Orbiniidae).

    PubMed

    Francoeur, Alex A; Dorgan, Kelly M

    2014-04-01

    Muddy and sandy sediments have different physical properties. Muds are cohesive elastic solids, whereas granular beach sands are non-cohesive porous media. Infaunal organisms such as worms that burrow through sediments therefore face different mechanical challenges that potentially lead to a variety of burrowing strategies and morphologies. In this study we compared three morphologically distinct polychaete species representing different clades in the family Orbiniidae and related differences in their burrowing behaviors and morphologies to their natural environments (mud or sand). Worms burrowed in transparent analogs for muds and sands, and kinematic analysis showed differences both among species and between materials. Leitoscoloplos pugettensis lives in mud and burrows by fracture, using its pointed head to concentrate stress at the tip of the burrow. Naineris dendritica lives in sand and uses its broader head that fluctuates in width over a burrowing cycle to decrease backward slipping in sand, potentially preventing burrow collapse. Orbinia johnsoni lives in sand and uses internal body expansions to pack sand grains, another mechanism to prevent burrow collapse. By combining data from species and materials to obtain a broad range of burrowing velocities, we show that burrowing worms control their velocity by increasing or decreasing their burrowing frequency rather than by altering cycle distance as shown previously for crawling earthworms. This study demonstrates how fairly small evolutionary divergences in morphologies and behaviors facilitate locomotion in environments with different physical constraints. PMID:24797095

  3. Cosmopolitan versus cryptic meiofaunal polychaete species: an approach to a molecular taxonomy

    NASA Astrophysics Data System (ADS)

    Westheide, W.; Schmidt, H.

    2002-08-01

    Polychaete taxonomy is characterised by a high number of apparently cosmopolitan species. Detection of subtle but diagnostic ultrastructural differences and - in recent years - investigations at the molecular level have revealed that many of these "species" are actually complexes of morphologically identical or almost identical cryptic species. To disregard their existence would lead to an underestimation of global meiofauna diversity and undermine the value of many scientific studies. Therefore, we strongly recommend that they be given formal taxonomic recognition, beyond their published presentation as "operational taxonomic units", "types" or by alphabetic or numerical designators. Since there are neither generally accepted practical procedures nor any established consensus regarding the application of genetic data in taxonomy, we here provide examples of, and suggestions for, the treatment of meiofaunal species that are distinguished exclusively by molecular data, e.g. by genetic distance values, cluster analyses, diagnostic (= autapomorphic) DNA fragments from DNA fingerprinting procedures (RAPD) and/or DNA sequence differences (e.g. of ITS 2). Although no holotype material may be available because the molecular procedures require the preparation of entire specimens, practical taxonomic problems can be overcome and the recommendations of the Zoological Code of Nomenclature satisfied, by adopting the following procedures: (1) deposition of band-patterns of an individual obtained with the primers used to find diagnostic markers; (2) deposition of DNA in ethanol of one syntype individual; (3) deposition of fixed specimens (syntypes) from the locus typicus.

  4. Mechanics and kinematics of backward burrowing by the polychaete Cirriformia moorei.

    PubMed

    Che, James; Dorgan, Kelly M

    2010-12-15

    The polychaete Cirriformia moorei burrows in muddy sediments by fracture, using its hydrostatic skeleton to expand its anterior region and exert force against its burrow wall to extend a crack. Burrowing occurs in four phases: stretching forward into the burrow, extending the crack anteriorly, thickening the burrowing end to amplify stress at the tip of the crack, and bringing the rest of the body forward as a peristaltic wave travels posteriorly. Here, we show that C. moorei is also able to burrow with its posterior end using a similar mechanism of crack propagation and exhibiting the same four phases of burrowing. Worms burrowed backwards with similar speeds and stress intensity factors as forward burrowing, but were thinner and less blunt and did not slip as far away from the crack tip between cycles of burrowing. The anterior end is more muscular and rigid, and differences in body shapes are consistent with having reduce musculature to dilate the posterior segments while burrowing. Backward burrowing provides a unique opportunity to study the effects of morphology on burrowing mechanics within the same species under identical conditions. PMID:21113009

  5. Burrowing by small polychaetes - mechanics, behavior and muscle structure of Capitella sp.

    PubMed

    Grill, Susann; Dorgan, Kelly M

    2015-05-15

    Worms of different sizes extend burrows through muddy sediments by fracture, applying dorso-ventral forces that are amplified at the crack tip. Smaller worms displace sediments less than larger worms and therefore are limited in how much force they can apply to burrow walls. We hypothesized that small worms would exhibit a transition in burrowing mechanics, specifically a lower limit in body size for the ability to burrow by fracture, corresponding with an ontogenetic transition in muscle morphology. Kinematics of burrowing in a mud analog, external morphology and muscle arrangement were examined in juveniles and adults of the small polychaete Capitella sp. We found that it moves by peristalsis, and no obvious differences were observed among worms of different sizes; even very small juveniles were able to burrow through a clear mud analog by fracture. Interestingly, we found that in addition to longitudinal and circular muscles needed for peristaltic movements, left- and right-handed helical muscles wrap around the thorax of worms of all sizes. We suggest that in small worms helical muscles may function to supplement forces generated by longitudinal muscles and to maintain hydrostatic pressure, enabling higher forces to be exerted on the crack wall. Further research is needed, however, to determine whether surficial sediments inhabited by small worms fail by fracture or plastically deform under forces of the magnitudes applied by Capitella sp. PMID:25827841

  6. Multiple life stage sensitivity of a deposit-feeding polychaete to chemical toxicants in sediment

    SciTech Connect

    Rice, C.A.; Sibley, T.; Ylitalo, G.M.; Casillas, E.

    1995-12-31

    By focusing on acute toxicity in species with habitat and food preferences often quite different from the environments of primary interest; that is, the depositional, fine-grained, organically enriched benthos, standard methods of testing sediment toxicity using single species have important problems of relevance in terms of test endpoints and target species. This study addresses these issues by building a set of baseline toxicity data that emphasizes critical life stage sensitivity over a wide range of toxicant concentrations in long-term sediment exposures for an animal with a model life history. The opportunistic, deposit-feeding polychaete Armandia brevis was exposed to sediments supplemented with fluoranthene, cadmium, copper, lead, and mercury, alone and in a model mixture, for 60 days. Mortality and emergence from sediment were recorded daily, and growth and maturity were measured at 20, 40, and 60d. To measure recruitment, cultured larvae were presented with the same sediments and allowed to settle and complete metamorphosis. Differential endpoint sensitivity, and differential chemical toxicity were evaluated. In addition, sediment and tissue concentrations of organic toxicants were used to link toxic responses to body burdens, and to consider the role of benthic infauna as contaminant vectors in the marine environment.

  7. Tube epifauna of the Polychaete Phyllochaetopterus socialisClaparède

    NASA Astrophysics Data System (ADS)

    Nalesso, Rosebel Cunha; Duarte, Luíz. Francisco L.; Pierozzi, Ivo, Jr.; Enumo, Eloisa Fiorim

    1995-07-01

    Animals greater than 1 mm, found among tangled tubes of Phyllochaetopterus socialis(Chaetopteridae) from Araçá Beach, São Sebastião district, Brazil, were studied for 1 year, with four samples in each of four seasons. They comprised 10 338 individuals in 1722·7 g dry weight of polychaete tubes, with Echinodermata, Polychaeta (not identified to species) and Crustacea as the dominant taxa. The Shannon-Wiener diversity index did not vary seasonally, only two species (a holothurian and a pycnogonid) showing seasonal variation. Ophiactis savignyiwas the dominant species, providing 45·5% of individuals. Three other ophiuroids, the holothurian Synaptula hidriformis, the crustaceans Leptochelia savignyi, Megalobrachium soriatumand Synalpheus fritzmuelleri, the sipunculan Themiste alutaceaand the bivalve Hiatella arcticawere all abundant, but most of the 68 species recorded occurred sparsely. The assemblage associated with P. socialiswas similar to the endofauna of the sponge Zygomycale parishiiand the bryozoan Schizoporella unicornis, and to the epifauna of seaweed Sargassum cymosum, all of which occurred nearby.

  8. Proteomic Changes Associated with Successive Reproductive Periods in Male Polychaetous Neanthes arenaceodentata

    PubMed Central

    Chandramouli, Kondethimmanahalli H.; Reish, Donald; Zhang, Huoming; Qian, Pei-Yuan; Ravasi, Timothy

    2015-01-01

    The polychaetous annelid Neanthes acuminata complex has a widespread distribution, with the California population referred to as N. arenaceodentata. The reproductive pattern in this complex is unique, in that the female reproduces once and then dies, whereas the male can reproduce up to nine times. The male incubates the embryos until the larvae leave the male’s tube 21–28 days later and commences feeding. Reproductive success and protein expression patterns were measured over the nine reproductive periods. The percent success of the male in producing juveniles increased during the first three reproductive periods and then decreased, but the number of juveniles produced was similar through all nine periods. iTRAQ based quantitative proteomics were used to analyze the dynamics of protein expression patterns. The expression patterns of several proteins were found to be altered. The abundant expression of muscular and contractile proteins may have affected body weight and reproductive success. Sperm have never been observed; fertilization occurs within the parent’s tube. Proteins associated with sperm maturation and fertilization were identified, including ATPase, clathrin, peroxiredoxins and enolase, which may provide clues to the molecular mechanisms enabling males to reproduce multiple times. PMID:26337980

  9. Sublethal predation and regeneration in two onuphid polychaetes: patterns and implications.

    PubMed

    Berke, Sarah K; Cruz, Veronica; Osman, Richard W

    2009-12-01

    We examined sublethal predation in the polychaete Diopatra cuprea, an important ecosystem engineer of intertidal and shallow subtidal marine sediments in the western Atlantic. D. cuprea commonly loses its antennae and portions of its anterior to predator attacks; these lost body portions are subsequently regenerated. We asked (i) if the intensity of sublethal predation differs for D. cuprea populations in Virginia versus Florida, (ii) if sublethal predation varies temporally in each region, and (iii) if sublethal predation influences activity and tube-building rates. Within Florida, we also drew comparisons between D. cuprea and the closely related onuphid Americonuphis magna. Surprisingly, we found that sublethal predation is more intense in Virginia than in Florida, likely making substantial contributions to secondary productivity. Within Florida, A. magna experienced more antennal loss than D. cuprea and is incapable of anterior regeneration. D. cuprea activity and tube-building rates are strongly influenced by anterior loss, but more subtly influenced by antennal loss. Given the observed rates of sublethal predation and population densities in Virginia versus Florida, sublethal predation is an important factor influencing D. cuprea populations and their associated communities. PMID:20040749

  10. Physiological and biochemical responses of the Polychaete Diopatra neapolitana to organic matter enrichment.

    PubMed

    Carregosa, Vanessa; Velez, Cátia; Pires, Adília; Soares, Amadeu M V M; Figueira, Etelvina; Freitas, Rosa

    2014-10-01

    Several studies have demonstrated that organic matter enrichment may be associated to aquaculture, leading to impoverished benthic communities and species succession with loss of biodiversity, but very few studies have investigated biochemical and physiological alterations that species affected by aquaculture activities undergo. Thus, in the present study, the effects of the organic enrichment originating from an oyster culture were studied in the Polychaete Diopatra neapolitana, a species already shown to be sensitive to inorganic contamination. For this, physiological responses and biochemical alterations were evaluated. The results obtained revealed that individuals from highly organically enriched areas presented lower capacity to regenerate their body but higher glycogen and protein levels. Furthermore, with increasing organic matter D. neapolitana increased the lipid peroxidation (LPO), the oxidized glutathione content (GSSG) and Glutathione S-transferase activity (GSTs) content, and the activity of the antioxidant enzymes catalase (CAT) and superoxide dismutase (SOD). This study evidenced that organic matter enrichment induced biochemical and physiological alterations in D. neapolitana. Thus, this species was shown to be a good sentinel species to monitor organic contamination. PMID:24973779